Psyllid ID: psy1960
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 428 | 2.2.26 [Sep-21-2011] | |||||||
| Q7SY23 | 556 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.778 | 0.598 | 0.443 | 2e-80 | |
| Q8CHT0 | 562 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.738 | 0.562 | 0.452 | 9e-79 | |
| P30038 | 563 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.778 | 0.591 | 0.449 | 1e-78 | |
| A7YWE4 | 563 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.719 | 0.547 | 0.451 | 6e-77 | |
| P0C2X9 | 563 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.738 | 0.561 | 0.447 | 9e-77 | |
| Q54RA2 | 558 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.703 | 0.539 | 0.377 | 7e-54 | |
| P78568 | 546 | Delta-1-pyrroline-5-carbo | N/A | N/A | 0.738 | 0.578 | 0.364 | 4e-52 | |
| O74766 | 548 | Probable delta-1-pyrrolin | yes | N/A | 0.726 | 0.567 | 0.348 | 4e-45 | |
| Q9P8I0 | 572 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.703 | 0.526 | 0.343 | 1e-44 | |
| P07275 | 575 | Delta-1-pyrroline-5-carbo | yes | N/A | 0.675 | 0.502 | 0.347 | 2e-44 |
| >sp|Q7SY23|AL4A1_DANRE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Danio rerio GN=aldh4a1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 299 bits (766), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 218/379 (57%), Gaps = 46/379 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V+ P + GSKER + AL+ + EE+P VIG++E T+ +++Q
Sbjct: 24 EVKNEPVLEFKEGSKERAELEEALRNLKGKTEEIPCVIGNEEVWTKDIRFQLS------- 76
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH ++AKF YA +L A++ + L P + +++
Sbjct: 77 ---PFNHSHQVAKFCYADKDLLNKAIEASVAARREWDLKPVSDRAQIFFKAADIISGPKR 133
Query: 143 FRCLDDLKYAAGN----------------YYINDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G + N K + QQP + Y
Sbjct: 134 AEVLAKTMIGQGKTVVQAEIDAAPELIDFFRFNAKHAIELEDQQPLDSDGSTNTMLY--- 190
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAAV+PFNFTAIGGNLA TPALMG+ VLWKPSDTA+ ++Y +YKI+
Sbjct: 191 --------RGLEGFVAAVAPFNFTAIGGNLAGTPALMGNVVLWKPSDTAMSASYAVYKIL 242
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
E+G+PP ++ FVPADGPVFGDT+T+S +LAGINFTGSVPTF RLW QV +N+++YKNFP
Sbjct: 243 RESGLPPNIIQFVPADGPVFGDTVTSSEHLAGINFTGSVPTFKRLWKQVAQNLDIYKNFP 302
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
R+ GECGGKNFHF+H SA+V SVV GTIRSAFEY GQKCSACSRMYVP+SL+ LL
Sbjct: 303 RVAGECGGKNFHFVHKSADVRSVVTGTIRSAFEYGGQKCSACSRMYVPDSLWPQIRQGLL 362
Query: 367 LFLFSASV--PVFCFCSCF 383
V PV F + F
Sbjct: 363 DVYKQIKVGDPVEDFSTFF 381
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. Danio rerio (taxid: 7955) EC: 1EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q8CHT0|AL4A1_MOUSE Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh4a1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 294 bits (752), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 211/360 (58%), Gaps = 44/360 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + +E +P V+G +E T +QYQ
Sbjct: 30 KVTNEPILAFSQGSPERDALQKALKDLKGQMEAIPCVVGDEEVWTSDIQYQLS------- 82
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A+D + L P + L ++L
Sbjct: 83 ---PFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRR 139
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + G+QP + T Y
Sbjct: 140 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVY--- 196
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 197 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 248
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FP
Sbjct: 249 REAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFP 308
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
RL GECGGKNFHF+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+SL+ LL
Sbjct: 309 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLL 368
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P30038|AL4A1_HUMAN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH4A1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 293 bits (751), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 172/383 (44%), Positives = 220/383 (57%), Gaps = 50/383 (13%)
Query: 7 NRPEYMRCQIEYLHFSLLILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIV 66
+RP + + + H S L V P + GS ER+A+ ALK + +E +P V
Sbjct: 14 SRP-WTGAGLRWKHTSSL-----KVANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCV 67
Query: 67 IGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP-VLKSALDIVSS------ 119
+G +E T VQYQ VS P NH K+AKF YA +L A++ +
Sbjct: 68 VGDEEVWTSDVQYQ--VS--------PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWD 117
Query: 120 LCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYI----------------NDKST 163
L P + L ++L L G I N K
Sbjct: 118 LKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYA 177
Query: 164 GSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM 223
+ GQQP + T Y GL+GFVAA+SPFNFTAIGGNLA PALM
Sbjct: 178 VELEGQQPISVPPSTNSTVY-----------RGLEGFVAAISPFNFTAIGGNLAGAPALM 226
Query: 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283
G+ VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ FVPADGP+FGDT+T+S +L GINFTG
Sbjct: 227 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTG 286
Query: 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQ 343
SVPTF LW QV +N++ + FPRL GECGGKNFHF+H SA+VESVV+GT+RSAFEY GQ
Sbjct: 287 SVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGGQ 346
Query: 344 KCSACSRMYVPESLFCFCSCFLL 366
KCSACSR+YVP SL+ LL
Sbjct: 347 KCSACSRLYVPHSLWPQIKGRLL 369
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|A7YWE4|AL4A1_BOVIN Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH4A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 288 bits (737), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 202/352 (57%), Gaps = 44/352 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ ALK + E +P V+G +E T V+YQ
Sbjct: 31 QVANEPVLAFTQGSPERDALQKALKELKGRTEAIPCVVGDEEVWTSDVRYQAS------- 83
Query: 90 QPMPHNHKKKIAKFYYATPVL-----KSALDIVS--SLCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA L +AL L P + L ++L
Sbjct: 84 ---PFNHGHKVAKFCYADKALLHRAIGAALAARKEWDLKPVADRAQVFLKAADLLSGPRR 140
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + G+QP + Y
Sbjct: 141 AEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAMELEGEQPLSVPPSTNSMLY--- 197
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 198 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 249
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP ++ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FP
Sbjct: 250 REAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFP 309
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
RL GECGGKNFHF+H SA+V+SVV+GT+RSAFEY GQKCSACSR+Y P SL+
Sbjct: 310 RLAGECGGKNFHFVHRSADVDSVVSGTLRSAFEYGGQKCSACSRLYAPRSLW 361
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P0C2X9|AL4A1_RAT Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh4a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 287 bits (735), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 207/360 (57%), Gaps = 44/360 (12%)
Query: 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P + GS ER+A+ AL + E +P V+G +E T V+YQ
Sbjct: 30 KVANEPILAFTQGSPERDALQKALNDLKDQTEAIPCVVGDEEVWTSDVRYQLS------- 82
Query: 90 QPMPHNHKKKIAKFYYATP-VLKSALDIVS------SLCPYEKNSVGLLINTEVLHDDLY 142
P NH K+AKF YA +L A++ L P + L ++L
Sbjct: 83 ---PFNHGHKVAKFCYADKALLNKAIEAAVLARKEWDLKPVADRAQIFLKAADMLSGPRR 139
Query: 143 FRCLDDLKYAAGNYYI----------------NDKSTGSVVGQQPFGGGRMSALTFYLEV 186
L G I N K + G+QP + Y
Sbjct: 140 AEILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHVVY--- 196
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+
Sbjct: 197 --------RGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRIL 248
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PP V+ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FP
Sbjct: 249 REAGLPPNVIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFP 308
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
RL GECGGKNFHF+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+SL+ LL
Sbjct: 309 RLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPQSLWPQIKGRLL 368
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q54RA2|AL4A1_DICDI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0283293 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 211 bits (538), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/352 (37%), Positives = 194/352 (55%), Gaps = 51/352 (14%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94
P Y GS R+ + A + +T ++P V+G KE +T VQ Q + S
Sbjct: 25 PMLNYEVGSTHRKLLKEACAKFRNTTIDIPCVVGGKEIRTGDVQKQLICS---------- 74
Query: 95 NHKKKIAKFYYATPVLKSALDIVSSL--------CPYEKNSV-----GLLINTEVLHDDL 141
+H K +A F+ A L L + +S+ P+E S L+NT+ +D L
Sbjct: 75 DHNKVLATFHQANAELLK-LAVENSMESKAQWESLPFEARSAVFLKAADLLNTKYRYDVL 133
Query: 142 YFRCLDDLKY---------AAGNYYI--NDKSTGSVVGQQP--FGGGRMSALTFYLEVLA 188
L K A G ++ N K + QQP G + LT+
Sbjct: 134 ASTMLGQGKTVWQAEIDAAAEGIDFLRFNVKYAQEIYQQQPPANSAGCWNILTY------ 187
Query: 189 SNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIE 248
+ L+G+V A+SPFNFTAIG NL+ PALMG+ VLWKP+ TA+LSN+ +YK ++E
Sbjct: 188 ------QPLEGYVVAISPFNFTAIGLNLSSAPALMGNVVLWKPASTAVLSNWIVYKALLE 241
Query: 249 AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFP 306
AG+P GV+ F+P G + G+ + + +G++FTGS FN ++ + N+ VYK +P
Sbjct: 242 AGLPAGVIQFLPGSGRLVGEHLFNNRNFSGLHFTGSTGVFNDIYKKTADNLVAGVYKGYP 301
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
R++GE GGK+FHF+H S +VE+ VN T+R AFEY GQKCSACSR Y+P+SL+
Sbjct: 302 RIVGETGGKDFHFLHNSGDVENFVNNTLRGAFEYQGQKCSACSRAYIPQSLW 353
|
Irreversible conversion of delta-1-pyrroline-5-carboxylate (P5C), derived either from proline or ornithine, to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. Dictyostelium discoideum (taxid: 44689) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P78568|PUT2_AGABI Delta-1-pyrroline-5-carboxylate dehydrogenase OS=Agaricus bisporus GN=pruA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 125/343 (36%), Positives = 178/343 (51%), Gaps = 27/343 (7%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVE-EVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
V P +Y PGS ER + AAL + S + EVP +I +E +T ++Q QPM
Sbjct: 14 VSNEPMLSYAPGSPERAGLQAALAEMQSQLPFEVPCIINGQEVRTNNIQKQPM------- 66
Query: 90 QPMPHNHKKKIAKFYYATPVLK--------SALDIVSSLCPYEKNSVGLLINTEVLHDDL 141
PH+H + + F+ +P L A D ++ P+ + L ++
Sbjct: 67 ---PHDHARHLCTFHEGSPELVEKATCGALQAKDGWETM-PWNDRAAIFLKAADLASGKY 122
Query: 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASN----LGRGE-- 195
++ + G + + F G Y + N R E
Sbjct: 123 RYKLMAATMLGQGKNTWQAEIDAAAELADFFRFGVSYVEELYAQQPPKNAPGCWNRTEYR 182
Query: 196 GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
L+GFV AVSPFNFTAIGGNL +PAL+G+ V+WKP+ A SNY ++KI+ EAGVPPGV
Sbjct: 183 PLEGFVLAVSPFNFTAIGGNLPGSPALVGNVVVWKPAPAATYSNYLVFKILSEAGVPPGV 242
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ F+P + I SP ++FTGS F LW + N++ YK +PR++GE GGK
Sbjct: 243 IQFIPGGAEIVQAAIQ-SPNFRSLHFTGSTNVFKSLWKDISSNLDKYKVYPRIVGETGGK 301
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N+H IH SA V + V ++R AFEY GQKCSA SR+YV S++
Sbjct: 302 NWHVIHKSAEVRNAVLQSVRGAFEYQGQKCSALSRLYVSRSVW 344
|
Agaricus bisporus (taxid: 5341) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|O74766|PUT2_SCHPO Probable delta-1-pyrroline-5-carboxylate dehydrogenase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC24C6.04 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 175/341 (51%), Gaps = 30/341 (8%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVE-EVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
++ P Y P S +RE I A K + + + +P++I KE +T + Q
Sbjct: 12 IKNEPPKHYGPNSADREGIVKAYKELEAELPVTIPVIIDGKEVETNTIGEQRC------- 64
Query: 90 QPMPHNHKKKIAKFYYA-----TPVLKSAL--DIVSSLCPYEKNSVGLLINTEVLHDDLY 142
P HKK +A+++ A +++AL V P+ S L ++
Sbjct: 65 ---PFEHKKVVARYHRAGAKHVEDAIEAALRGKKVWESLPFADRSAIFLKAAHLISTKYR 121
Query: 143 FRCLDDLKYAAG-NYYINDKSTG-SVVGQQPFGGGRMSALTFYLEVLASNL----GRGE- 195
++ + G N + + G ++ F S L Y N R E
Sbjct: 122 YKLMAATMIGQGKNIWQAEIDAGMEIIDFLRFNTKYASEL--YASQPPENTPGVWNRMEY 179
Query: 196 -GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
L+GFV A++PFNFTAI GNLA P LMG+ VL KPSD A+LS+Y +Y+I EAG+P G
Sbjct: 180 RPLEGFVYAITPFNFTAIAGNLAAAPLLMGNVVLMKPSDHAVLSSYIVYQIFREAGLPAG 239
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGEC 312
+ F+P D P AG++FTGS F LW +G+N+ Y+ +P+++GE
Sbjct: 240 ALQFIPGDAVEVSKVCFNHPEFAGLHFTGSTAVFRSLWGTIGENVANGKYRTYPKIVGET 299
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
GGKNFH +H+SA ++S V +R+AFEY GQKCSA SR+YV
Sbjct: 300 GGKNFHLVHSSAEIKSAVVNAVRAAFEYQGQKCSALSRLYV 340
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|Q9P8I0|PUT2_EMENI Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=prnC PE=3 SV=2 | Back alignment and function description |
|---|
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 123/358 (34%), Positives = 178/358 (49%), Gaps = 57/358 (15%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVE-EVPIVIGSKEYKTEHVQYQPMVSLHVQY 89
+ P Y GS +R+A+ AL R VP+VI KE K+ Q + H
Sbjct: 35 IDNEPNKHYAAGSPDRKALQEALARTQRNAPLSVPLVIAGKEVKSSSSLTQSNPASHGPV 94
Query: 90 QPMPHNHKKKIA----------KFYYATP------VLKSALDIVSSLCPYE--------- 124
+ K + K + +TP V A D++S+ Y+
Sbjct: 95 ATYSNATAKDVQAAIESALEARKSWASTPFADRASVFLKAADLISTKYRYDVMALTMHGQ 154
Query: 125 -KNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQP--FGGGRMSALT 181
KN+ I++ D +FR +KYA Y QQP G + +
Sbjct: 155 GKNAWQAEIDSAAELCD-FFRF--GVKYAEDLY-----------AQQPVHHAPGVWNRVE 200
Query: 182 FYLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYT 241
+ L+GFV A+SPFNFTAIGGNLA PALMG+ V+WKPS +A+ SN+
Sbjct: 201 Y------------RPLEGFVYAISPFNFTAIGGNLAGAPALMGNVVVWKPSPSAIASNWL 248
Query: 242 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINV 301
+++I++EAG+P V+ FVP + T+ P A ++FTGS F L+ Q+ +
Sbjct: 249 VHQILLEAGLPKNVIQFVPGEAEEVTKTVLDHPDFAALHFTGSTNVFRNLYGQISTRVAA 308
Query: 302 --YKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
Y+++PR++GE GGKNFH IH SA++ + T+R AFEY GQKCSA SR+YV S+
Sbjct: 309 GKYRSYPRIVGETGGKNFHLIHKSADIRNAAVQTVRGAFEYQGQKCSATSRVYVASSI 366
|
Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
| >sp|P07275|PUT2_YEAST Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUT2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 180 bits (457), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 172/345 (49%), Gaps = 56/345 (16%)
Query: 44 KEREAITAALKRVGSTVEEVPIVI-GSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAK 102
K+ + + A+L + S+ EVP+VI G + Y P Q P NH++ +A
Sbjct: 42 KDWDLLRASLMKFKSSSLEVPLVINGERIYDNNERALFP--------QTNPANHQQVLAN 93
Query: 103 ---------------------------FYYATPVLKSALDIVSSLCPYEKNSVGLLINTE 135
FY + + A D++S+ Y+ + +L +
Sbjct: 94 VTQATEKDVMNAVKAAKDAKKDWYNLPFYDRSAIFLKAADLISTKYRYDMLAATMLGQGK 153
Query: 136 VLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGE 195
++ C+ +L YY+ K + QQP +E + E
Sbjct: 154 NVYQ-AEIDCITELS-DFFRYYV--KYASDLYAQQP------------VESADGTWNKAE 197
Query: 196 --GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPP 253
L+GFV AVSPFNFTAI NL PALMG++V+WKPS TA LSNY + ++ EAG+P
Sbjct: 198 YRPLEGFVYAVSPFNFTAIAANLIGAPALMGNTVVWKPSQTAALSNYLLMTVLEEAGLPK 257
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLW--LQVGKNINVYKNFPRLIGE 311
GV+NF+P D D + A ++FTGS F L+ +Q G Y+++PR+IGE
Sbjct: 258 GVINFIPGDPVQVTDQVLADKDFGALHFTGSTNVFKSLYGKIQSGVVEGKYRDYPRIIGE 317
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GGKNFH +H SAN+ V TIR FE+ GQKCSA SR+Y+PES
Sbjct: 318 TGGKNFHLVHPSANISHAVLSTIRGTFEFQGQKCSAASRLYLPES 362
|
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 1 EC: . EC: 5 EC: . EC: 1 EC: . EC: 1 EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 428 | ||||||
| 328698360 | 535 | PREDICTED: delta-1-pyrroline-5-carboxyla | 0.754 | 0.603 | 0.549 | 1e-99 | |
| 347971770 | 573 | AGAP004366-PA [Anopheles gambiae str. PE | 0.768 | 0.574 | 0.551 | 2e-98 | |
| 157109902 | 570 | pyrroline-5-carboxylate dehydrogenase [A | 0.754 | 0.566 | 0.550 | 2e-98 | |
| 312375387 | 613 | hypothetical protein AND_14227 [Anophele | 0.764 | 0.533 | 0.543 | 3e-98 | |
| 91084231 | 568 | PREDICTED: similar to pyrroline-5-carbox | 0.754 | 0.568 | 0.559 | 2e-97 | |
| 170042990 | 570 | pyrroline-5-carboxylate dehydrogenase [C | 0.724 | 0.543 | 0.555 | 9e-97 | |
| 357528293 | 398 | pyrroline-5-carboxylate dehydrogenase [L | 0.721 | 0.776 | 0.520 | 1e-96 | |
| 345483689 | 568 | PREDICTED: delta-1-pyrroline-5-carboxyla | 0.761 | 0.573 | 0.561 | 9e-96 | |
| 194876019 | 574 | GG13195 [Drosophila erecta] gi|190655482 | 0.733 | 0.547 | 0.538 | 1e-95 | |
| 24668413 | 574 | delta-1-Pyrroline-5-carboxylate dehydrog | 0.733 | 0.547 | 0.544 | 2e-95 |
| >gi|328698360|ref|XP_001952392.2| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/357 (54%), Positives = 241/357 (67%), Gaps = 34/357 (9%)
Query: 21 FSLLILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQ 80
SL + + V+ P Y+PGSKER+ I A LKR+ + VE+VPI+IG++++KT+ V+YQ
Sbjct: 27 LSLPKIKDFTVENEPLLEYMPGSKERKEIEAELKRLSNNVEDVPIIIGNEKFKTKDVRYQ 86
Query: 81 PMVSLHVQYQPMPHNHKKKIAKFYYATPVLKSALDIVSSLCPYEKNSVGLLINTEVLHDD 140
M PHNH KKIAKFYYA+ L + V++ + ++V L +
Sbjct: 87 VM----------PHNHSKKIAKFYYASSDLVAKAIKVATEAQTKWDTVPLEEKIRI---- 132
Query: 141 LYFRCLD------DLKYAAGNYYINDKS--------TGSVVGQQPFGGGRMSALTFYLEV 186
+ + D +K A K+ + ++ LT Y +
Sbjct: 133 -WLKAADLMATKYRMKLNAATMLGQSKTVIQAEIDASAELIDFIKLNAFFAKELTKYQPI 191
Query: 187 -----LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYT 241
+ N R GLDGFVAAVSPFNFTAIGGNLAYTPALMG SVLWKPSDTALLSN+
Sbjct: 192 SENKNVTLNSLRYRGLDGFVAAVSPFNFTAIGGNLAYTPALMGCSVLWKPSDTALLSNWV 251
Query: 242 IYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINV 301
IY+IM EAGVPPGVVNF+PADGPVFGDTITASP+L+GINFTGSVPTFNRLW QVGKNIN
Sbjct: 252 IYEIMTEAGVPPGVVNFIPADGPVFGDTITASPHLSGINFTGSVPTFNRLWTQVGKNINS 311
Query: 302 YKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
Y NFPRLIGECGGKN+HF+H +A+V SVV GTIRS+FEYCGQKCSACSR+YVP+SL+
Sbjct: 312 YVNFPRLIGECGGKNYHFVHPTADVTSVVTGTIRSSFEYCGQKCSACSRLYVPQSLW 368
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|347971770|ref|XP_313649.4| AGAP004366-PA [Anopheles gambiae str. PEST] gi|333469021|gb|EAA09247.4| AGAP004366-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 199/361 (55%), Positives = 238/361 (65%), Gaps = 32/361 (8%)
Query: 26 LDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSL 85
L + ++ P Y GSKER+ + +ALK+ S +E+VPIVIGS+E + S
Sbjct: 35 LAEFPLENEPILGYRKGSKERKELESALKKAASKMEDVPIVIGSEEIR----------SK 84
Query: 86 HVQYQPMPHNHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINTEVLHDDL-- 141
V++Q MPHNHK K+A+FYYA L K+ + +++ + I DL
Sbjct: 85 EVRHQVMPHNHKHKLAQFYYADQKLLQKAIKTATETQVKWDRTPLDERIRIWQKAADLMA 144
Query: 142 --YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLAS---------- 189
Y + L+ + S F RM+ T+YL+ A
Sbjct: 145 GPYRQELNAATMLGQAKTVIQAEIDSAAELIDFI--RMN--TYYLKEAAKYQPISEDAKV 200
Query: 190 --NLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMI 247
N R G+DGF+AAVSPFNFTAIGGNLAYTPALMG+ VLWKPSDTALLSNY I+KIM
Sbjct: 201 TKNSMRFRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNGVLWKPSDTALLSNYVIFKIMR 260
Query: 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307
EAGVPPGVVNFVP DGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG+NIN Y NFPR
Sbjct: 261 EAGVPPGVVNFVPTDGPVFGDTITASPHLAGINFTGSVPTFNRLWRQVGENINSYNNFPR 320
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLL 367
LIGECGGKN+HF+H SA+VESVVNGTIRSAFE+CGQKCSACSRMYVPESL+ LL+
Sbjct: 321 LIGECGGKNYHFVHPSADVESVVNGTIRSAFEFCGQKCSACSRMYVPESLWPKVKDGLLM 380
Query: 368 F 368
Sbjct: 381 I 381
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157109902|ref|XP_001650875.1| pyrroline-5-carboxylate dehydrogenase [Aedes aegypti] gi|108878912|gb|EAT43137.1| AAEL005422-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 191/347 (55%), Positives = 232/347 (66%), Gaps = 24/347 (6%)
Query: 26 LDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSL 85
L Y + P Y GSKER+ + AALK+ ST+E+VPI+IGS+E++T +V++Q M
Sbjct: 32 LPEYPLVNEPVLAYKKGSKERKELEAALKKTASTLEDVPIIIGSEEFRTNNVRHQVM--- 88
Query: 86 HVQYQPMPHNHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINTEVLHDDLY- 142
PHNH K+IAKFY+A L K+ + +++ + I DL
Sbjct: 89 -------PHNHSKQIAKFYWADKKLVEKAIKTATETQVKWDRTPISERIKIWQKAADLMA 141
Query: 143 ------FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEV-----LASNL 191
L A S ++ + T Y + + N
Sbjct: 142 GPYRAELNAATMLGQAKTVIQAEIDSAAELIDFIRMNTVYLKEATKYQPISENSKVTKNS 201
Query: 192 GRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
R G+DGF+AAVSPFNFTAIGGNLAYTPALMG+ VLWKPSDTALLSNY I+KIM EAGV
Sbjct: 202 LRFRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNGVLWKPSDTALLSNYVIFKIMREAGV 261
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
PPGVVNF+P DGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG+NIN+Y NFPRLIGE
Sbjct: 262 PPGVVNFIPTDGPVFGDTITASPHLAGINFTGSVPTFNRLWRQVGENINIYNNFPRLIGE 321
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
CGGKN+HF+H SA+V+SVVNGTIRS+FE+CGQKCSACSRMYVPESL+
Sbjct: 322 CGGKNYHFVHPSADVQSVVNGTIRSSFEFCGQKCSACSRMYVPESLW 368
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312375387|gb|EFR22772.1| hypothetical protein AND_14227 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/359 (54%), Positives = 238/359 (66%), Gaps = 32/359 (8%)
Query: 26 LDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSL 85
L + ++ P Y GSKER+ + AALK+ + +E+VPI+IGS+E++T+ VQ+Q M
Sbjct: 75 LSEFPLENEPVLGYKKGSKERKELEAALKKTAAKMEDVPIIIGSEEFRTKQVQHQVM--- 131
Query: 86 HVQYQPMPHNHKKKIAKFYYATP--VLKSALDIVSSLCPYEKNSVGLLINTEVLHDDL-- 141
PHNHK K+A+FY+A V K+ + +++ + I DL
Sbjct: 132 -------PHNHKHKLAQFYWADQKLVQKAIKTATETQVKWDRTPLDERIRIWQKAADLMA 184
Query: 142 --YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLE------------VL 187
Y + L+ + S F RM+ TFYL+ +
Sbjct: 185 GPYRQELNAATMLGQAKTVIQAEIDSAAELIDFI--RMN--TFYLKEACKYQPISENPKV 240
Query: 188 ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMI 247
N R G+DGF+AAVSPFNFTAIGGNLAYTPALMG+ VLWKPSDTALLSNY I+KIM
Sbjct: 241 TKNSIRFRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNGVLWKPSDTALLSNYVIFKIMR 300
Query: 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307
EAGVPPGVVNF+P DGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG NIN+Y NFPR
Sbjct: 301 EAGVPPGVVNFIPTDGPVFGDTITASPHLAGINFTGSVPTFNRLWRQVGDNINIYNNFPR 360
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
LIGECGGKN+HF+H SA+V SVVNGTIRS+FE+CGQKCSACSRMYVPESL+ LL
Sbjct: 361 LIGECGGKNYHFVHPSADVGSVVNGTIRSSFEFCGQKCSACSRMYVPESLWPKVKDGLL 419
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91084231|ref|XP_969408.1| PREDICTED: similar to pyrroline-5-carboxylate dehydrogenase [Tribolium castaneum] gi|270008791|gb|EFA05239.1| hypothetical protein TcasGA2_TC015385 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/347 (55%), Positives = 236/347 (68%), Gaps = 24/347 (6%)
Query: 26 LDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSL 85
+ + V+ P YL GSKER+ + ALK+ +T EEVPIVIG KE+KT+ V+YQ
Sbjct: 30 ISDFGVKNEPVLQYLKGSKERKELEEALKKTAATTEEVPIVIGDKEFKTDDVRYQVC--- 86
Query: 86 HVQYQPMPHNHKKKIAKFYYATP-VLKSALDI-VSSLCPYEK----NSVGLLINTEVLHD 139
PHNHKKK+AKFYYA +L A+D V + +++ + + + L
Sbjct: 87 -------PHNHKKKLAKFYYANKDLLNKAIDTAVETQKKWDRTPIPDRLKIWEKAASLMA 139
Query: 140 DLYFRCLDD---LKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEV-----LASNL 191
+ Y + L+ L A S ++ + T Y + + N
Sbjct: 140 NEYRQTLNAATMLGQAKTVIQAEIDSAAELIDFFRLNAYFLKEATKYQPISENPKVTKNS 199
Query: 192 GRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
R G+DGF+AAVSPFNFTAIGGNLAYTPALMG+++LWKPSDTALLSN+ I+KI EAGV
Sbjct: 200 MRYRGIDGFIAAVSPFNFTAIGGNLAYTPALMGNAILWKPSDTALLSNWVIFKICREAGV 259
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
PPGVVNFVPADGPVFGDTITAS YLAGINFTGSVPTF RLW QVG+NIN Y NFPRLIGE
Sbjct: 260 PPGVVNFVPADGPVFGDTITASKYLAGINFTGSVPTFTRLWTQVGQNINKYINFPRLIGE 319
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
CGGKN+HF+H SA+V +VVNGTIRSAFE+CGQKCSACSRMYVPESL+
Sbjct: 320 CGGKNYHFVHPSADVTTVVNGTIRSAFEFCGQKCSACSRMYVPESLW 366
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170042990|ref|XP_001849188.1| pyrroline-5-carboxylate dehydrogenase [Culex quinquefasciatus] gi|167866390|gb|EDS29773.1| pyrroline-5-carboxylate dehydrogenase [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 190/342 (55%), Positives = 231/342 (67%), Gaps = 32/342 (9%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94
P Y GSKER+ + AALK+ + E+VPI+IGS+E++T V++Q M PH
Sbjct: 41 PVLEYKKGSKERKELEAALKKTAAKTEDVPIIIGSEEFRTNEVRHQVM----------PH 90
Query: 95 NHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINTEVLHDDL----YFRCLDD 148
NH +KIA+FY+A L K+ + +++ + I DL Y + L+
Sbjct: 91 NHSQKIAQFYWADKKLVEKAIKTATETQVKWDRTPIAERIKIWQKAADLMAGPYRQELNA 150
Query: 149 LKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLE------------VLASNLGRGEG 196
+ S F RM+ TFYL+ + N R G
Sbjct: 151 ATMLGQAKTVIQAEIDSAAELIDFI--RMN--TFYLKEATKYQPISENAKVTKNSLRFRG 206
Query: 197 LDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
+DGFVAA+SPFNFTAIGGNLAYTPALMG+ VLWKPSDTALLSNY I+KIM EAGVPPGVV
Sbjct: 207 IDGFVAAISPFNFTAIGGNLAYTPALMGNGVLWKPSDTALLSNYVIFKIMREAGVPPGVV 266
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKN 316
NF+P DGPVFGD ITASP+LAGINFTGSVPTFNRLW QVG+NIN+Y NFPRLIGECGGKN
Sbjct: 267 NFIPTDGPVFGDNITASPHLAGINFTGSVPTFNRLWRQVGENINIYNNFPRLIGECGGKN 326
Query: 317 FHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+HFIH +A+V+SVVNGTIRS+FE+CGQKCSACSRMYVPESL+
Sbjct: 327 YHFIHPTADVQSVVNGTIRSSFEFCGQKCSACSRMYVPESLW 368
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357528293|gb|AET80385.1| pyrroline-5-carboxylate dehydrogenase [Leptinotarsa decemlineata] | Back alignment and taxonomy information |
|---|
Score = 360 bits (923), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/365 (52%), Positives = 238/365 (65%), Gaps = 56/365 (15%)
Query: 24 LILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMV 83
L ++ + V+ P + YL GSKER + LK + E+VPI+IG KE++T+ V+YQ M
Sbjct: 28 LKINDFGVKNEPVYEYLKGSKERVELEKELKETAAKTEDVPIIIGDKEFRTKDVRYQVM- 86
Query: 84 SLHVQYQPMPHNHKKKIAKFYYATPVL---------------------------KSALDI 116
PHNHKK+IAKFYYA L ++A +
Sbjct: 87 ---------PHNHKKQIAKFYYADRDLLNKAIETACEAQKKWDMVPIPERLRIWETAASL 137
Query: 117 VSSLCPYEKNSVGLLINTEVL---HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFG 173
++S + N+ +L + + D +D + A Y++ + + + + P
Sbjct: 138 MASQYRAKLNAATMLGQAKTIIQAEIDSAAELIDFFRLNA--YFLKEATKYQPISENP-- 193
Query: 174 GGRMSALTFYLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSD 233
+ N R G+DGF+AAVS FNFTAIGGNLAYTPALMG+SVLWKPSD
Sbjct: 194 ------------KITKNSMRYRGIDGFIAAVSTFNFTAIGGNLAYTPALMGNSVLWKPSD 241
Query: 234 TALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWL 293
TALLSN+ I+ I EAGVPPGVVNFVPADGPVFGDTITASP+LAGINFTGSVPTF RLW
Sbjct: 242 TALLSNWVIFNICREAGVPPGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFTRLWK 301
Query: 294 QVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353
QVG+NI++YKNFPRLIGECGGKN+HFIH +A+VE+VVNGTIRSAFE+CGQKCSACSRMYV
Sbjct: 302 QVGENIHIYKNFPRLIGECGGKNYHFIHPTADVETVVNGTIRSAFEFCGQKCSACSRMYV 361
Query: 354 PESLF 358
PESL+
Sbjct: 362 PESLW 366
|
Source: Leptinotarsa decemlineata Species: Leptinotarsa decemlineata Genus: Leptinotarsa Family: Chrysomelidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345483689|ref|XP_001601273.2| PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 196/349 (56%), Positives = 237/349 (67%), Gaps = 23/349 (6%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
++ P TY GSKER + AL ++ EE+PIVIG KE K++ V+YQ M
Sbjct: 36 LENEPILTYKKGSKERAELEKALDKMAGECEEIPIVIGGKEIKSDIVKYQTM-------- 87
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDI-VSSLCPYEK----NSVGLLINTEVLHDDLYFR 144
PHNH+ KIAK+YYATP +LK A+D+ V + +EK + + + L Y +
Sbjct: 88 --PHNHQHKIAKYYYATPDLLKKAIDVSVKTQREWEKVPFEKRLDIWLKAADLMATKYRQ 145
Query: 145 CLD-DLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFYLEVLAS----NLGRGEGL 197
L+ G I + S ++ G + Y + + N R G+
Sbjct: 146 QLNASTMLGQGKTAIQAEIDSAAELIDFFKMHGYFVKEALKYKPISPNKETLNSMRYRGM 205
Query: 198 DGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
DGFVAAVSPFNFTAIGGNL+YTPALMG+SVLWKPSDTA+LSN+ IYKI EAGVP GVVN
Sbjct: 206 DGFVAAVSPFNFTAIGGNLSYTPALMGNSVLWKPSDTAVLSNWWIYKICKEAGVPDGVVN 265
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
FVPA GP FGDTITASPYL+GINFTGSVPTFNRLW QVGKNIN+YKN+P+LIGECGGKNF
Sbjct: 266 FVPAHGPDFGDTITASPYLSGINFTGSVPTFNRLWTQVGKNINIYKNYPKLIGECGGKNF 325
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
HF+H SA+VESVV+GTIRS+FEY GQKCSACSRMYVPESL+ LL
Sbjct: 326 HFVHPSADVESVVSGTIRSSFEYNGQKCSACSRMYVPESLWSKIKAGLL 374
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|194876019|ref|XP_001973699.1| GG13195 [Drosophila erecta] gi|190655482|gb|EDV52725.1| GG13195 [Drosophila erecta] | Back alignment and taxonomy information |
|---|
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/360 (53%), Positives = 233/360 (64%), Gaps = 46/360 (12%)
Query: 24 LILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMV 83
L L + ++ P Y SKER+A+ ALK S+ E++PIVIG KEYKT ++YQ M
Sbjct: 34 LKLKDFPIENEPILGYRKDSKERKALEQALKGTASSCEDIPIVIGGKEYKTSEIRYQVM- 92
Query: 84 SLHVQYQPMPHNHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINTEVLHDDL 141
PH+H+ K+A FYYA L K+ V + +++ S+ + DL
Sbjct: 93 ---------PHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADL 143
Query: 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-------------RMSA-----LTFY 183
Y D + +++GQ RM+A +T Y
Sbjct: 144 M-----------ATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKY 192
Query: 184 LEV-----LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLS 238
+ + N R G+DGF+AAVSPFNFTAIGGNL+YTPALMG+ VLWKPSDTA+LS
Sbjct: 193 QPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLS 252
Query: 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKN 298
N+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG N
Sbjct: 253 NWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNN 312
Query: 299 INVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
I+ Y NFPRL GECGGKNFHFIHASA+VESVV TIRSAFEYCGQKCSACSRMYVPESL+
Sbjct: 313 IDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLW 372
|
Source: Drosophila erecta Species: Drosophila erecta Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|24668413|ref|NP_730695.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform A [Drosophila melanogaster] gi|24668417|ref|NP_649368.2| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform B [Drosophila melanogaster] gi|24668425|ref|NP_730698.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform D [Drosophila melanogaster] gi|320546182|ref|NP_001189159.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform E [Drosophila melanogaster] gi|442634086|ref|NP_001262196.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform F [Drosophila melanogaster] gi|7296504|gb|AAF51790.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform A [Drosophila melanogaster] gi|23094285|gb|AAN12191.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform B [Drosophila melanogaster] gi|23094287|gb|AAN12193.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform D [Drosophila melanogaster] gi|211938657|gb|ACJ13225.1| FI08816p [Drosophila melanogaster] gi|318069273|gb|ADV37595.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform E [Drosophila melanogaster] gi|440216173|gb|AGB94889.1| delta-1-Pyrroline-5-carboxylate dehydrogenase 1, isoform F [Drosophila melanogaster] | Back alignment and taxonomy information |
|---|
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 196/360 (54%), Positives = 233/360 (64%), Gaps = 46/360 (12%)
Query: 24 LILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMV 83
L L + + P YL SKER+A+ ALK S+ E++PIVIG KEYKT V+YQ M
Sbjct: 34 LKLKDFPIANEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGGKEYKTPEVRYQVM- 92
Query: 84 SLHVQYQPMPHNHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINTEVLHDDL 141
PH+H+ K+A FYYA L K+ V + +++ S+ + DL
Sbjct: 93 ---------PHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADL 143
Query: 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-------------RMSA-----LTFY 183
Y D + +++GQ RM+A +T Y
Sbjct: 144 M-----------ATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKY 192
Query: 184 LEV-----LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLS 238
+ + N R G+DGF+AAVSPFNFTAIGGNL+YTPALMG+ VLWKPSDTA+LS
Sbjct: 193 QPISENIKVTKNSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLS 252
Query: 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKN 298
N+ I+KIM EAGVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG N
Sbjct: 253 NWIIFKIMREAGVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNN 312
Query: 299 INVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
I+ Y NFPRL GECGGKNFHFIHASA+VESVV TIRSAFEYCGQKCSACSRMYVPESL+
Sbjct: 313 IDNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLW 372
|
Source: Drosophila melanogaster Species: Drosophila melanogaster Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 428 | ||||||
| FB|FBgn0037138 | 574 | P5CDh1 "delta-1-Pyrroline-5-ca | 0.752 | 0.560 | 0.557 | 2.9e-87 | |
| ZFIN|ZDB-GENE-040426-1179 | 556 | aldh4a1 "aldehyde dehydrogenas | 0.735 | 0.566 | 0.474 | 3.2e-72 | |
| UNIPROTKB|E1C8Z8 | 551 | ALDH4A1 "Uncharacterized prote | 0.733 | 0.569 | 0.485 | 6.7e-72 | |
| UNIPROTKB|F1PT06 | 1459 | TAS1R2 "Taste receptor type 1 | 0.373 | 0.109 | 0.706 | 1.4e-71 | |
| UNIPROTKB|D2D4A3 | 512 | ALDH4A1 "Mitochondrial aldehyd | 0.733 | 0.613 | 0.470 | 9.9e-71 | |
| UNIPROTKB|P30038 | 563 | ALDH4A1 "Delta-1-pyrroline-5-c | 0.733 | 0.557 | 0.470 | 9.9e-71 | |
| MGI|MGI:2443883 | 562 | Aldh4a1 "aldehyde dehydrogenas | 0.735 | 0.560 | 0.462 | 1.6e-70 | |
| UNIPROTKB|J9P2L3 | 564 | TAS1R2 "Taste receptor type 1 | 0.735 | 0.558 | 0.468 | 1.1e-69 | |
| WB|WBGene00000112 | 563 | alh-6 [Caenorhabditis elegans | 0.394 | 0.300 | 0.639 | 2e-69 | |
| RGD|1624206 | 563 | Aldh4a1 "aldehyde dehydrogenas | 0.735 | 0.559 | 0.459 | 3e-69 |
| FB|FBgn0037138 P5CDh1 "delta-1-Pyrroline-5-carboxylate dehydrogenase 1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 193/346 (55%), Positives = 229/346 (66%)
Query: 24 LILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMV 83
L L + + P YL SKER+A+ ALK S+ E++PIVIG KEYKT P
Sbjct: 34 LKLKDFPIANEPILGYLKDSKERKALEQALKGTASSCEDIPIVIGGKEYKT------P-- 85
Query: 84 SLHVQYQPMPHNHKKKIAKFYYATPVL--KSALDIVSSLCPYEKNSVGLLINT-EVLHDD 140
V+YQ MPH+H+ K+A FYYA L K+ V + +++ S+ + E D
Sbjct: 86 --EVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSIADRLKIWEKAADL 143
Query: 141 LYFRCLDDLKYAA----GNYYINDK--STGSVVGQQPFGGGRMSALTFYLEV-----LAS 189
+ DL A I + S ++ + +T Y + +
Sbjct: 144 MATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTKYQPISENIKVTK 203
Query: 190 NLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEA 249
N R G+DGF+AAVSPFNFTAIGGNL+YTPALMG+ VLWKPSDTA+LSN+ I+KIM EA
Sbjct: 204 NSLRYRGIDGFIAAVSPFNFTAIGGNLSYTPALMGNGVLWKPSDTAMLSNWIIFKIMREA 263
Query: 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309
GVP GVVNFVPADGPVFGDTITASP+LAGINFTGSVPTFNRLW QVG NI+ Y NFPRL
Sbjct: 264 GVPDGVVNFVPADGPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNIDNYVNFPRLT 323
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
GECGGKNFHFIHASA+VESVV TIRSAFEYCGQKCSACSRMYVPE
Sbjct: 324 GECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPE 369
|
|
| ZFIN|ZDB-GENE-040426-1179 aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 160/337 (47%), Positives = 213/337 (63%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V+ P + GSKER + AL+ + EE+P VIG++E T+ +++Q +S
Sbjct: 25 VKNEPVLEFKEGSKERAELEEALRNLKGKTEEIPCVIGNEEVWTKDIRFQ--LS------ 76
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDI-VSS-----LCPYEKNSVGLLINTEVLHDDLYF 143
P NH ++AKF YA +L A++ V++ L P + +++
Sbjct: 77 --PFNHSHQVAKFCYADKDLLNKAIEASVAARREWDLKPVSDRAQIFFKAADIISGPKRA 134
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFY--LEVLAS-NLGRGEGLD 198
L G + + + ++ F L L+ S N GL+
Sbjct: 135 EVLAKTMIGQGKTVVQAEIDAAPELIDFFRFNAKHAIELEDQQPLDSDGSTNTMLYRGLE 194
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAAV+PFNFTAIGGNLA TPALMG+ VLWKPSDTA+ ++Y +YKI+ E+G+PP ++ F
Sbjct: 195 GFVAAVAPFNFTAIGGNLAGTPALMGNVVLWKPSDTAMSASYAVYKILRESGLPPNIIQF 254
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGPVFGDT+T+S +LAGINFTGSVPTF RLW QV +N+++YKNFPR+ GECGGKNFH
Sbjct: 255 VPADGPVFGDTVTSSEHLAGINFTGSVPTFKRLWKQVAQNLDIYKNFPRVAGECGGKNFH 314
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
F+H SA+V SVV GTIRSAFEY GQKCSACSRMYVP+
Sbjct: 315 FVHKSADVRSVVTGTIRSAFEYGGQKCSACSRMYVPD 351
|
|
| UNIPROTKB|E1C8Z8 ALDH4A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 163/336 (48%), Positives = 205/336 (61%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + PGS ER A+ AL + E +P V+G +E T V+YQ +S
Sbjct: 20 VTNEPILEFKPGSPERAALQKALAELKGRTESIPCVVGGEEVWTSAVRYQ--LS------ 71
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA ++ A++ + L P + + L ++L
Sbjct: 72 --PFNHAHKVAKFCYADKDLINKAINAAVAARKEWDLKPIQDRAQIFLKAADMLSGPRRA 129
Query: 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFY----LEVLAS-NLGRGEGLD 198
L G I + + F AL L V AS N GL+
Sbjct: 130 EVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYALELQGSQPLSVEASTNSMVYRGLE 189
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAAVSPFNFTAIGGNLA TPALMG+ VLWKPSDTALLS+Y +YKI++EAG+PP V+ F
Sbjct: 190 GFVAAVSPFNFTAIGGNLAGTPALMGNVVLWKPSDTALLSSYAVYKILLEAGLPPNVIQF 249
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGPVFGD +T+S + G+NFTGSVPTF RLW Q +N++ Y++FPRL GECGGKNFH
Sbjct: 250 VPADGPVFGDAVTSSEHFCGLNFTGSVPTFKRLWKQASENLDRYRSFPRLAGECGGKNFH 309
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
+H+SA+V SVVNGT+RSAFEY GQKCSACSR+Y P
Sbjct: 310 LVHSSADVSSVVNGTLRSAFEYGGQKCSACSRLYAP 345
|
|
| UNIPROTKB|F1PT06 TAS1R2 "Taste receptor type 1 member 2" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 648 (233.2 bits), Expect = 1.4e-71, Sum P(2) = 1.4e-71
Identities = 113/160 (70%), Positives = 139/160 (86%)
Query: 196 GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y++ EAG+PP +
Sbjct: 558 GLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRVFREAGLPPNI 617
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FPRL GECGGK
Sbjct: 618 IQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFPRLAGECGGK 677
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
NFHF+H SA+V SVV+GT+RSAFEY GQKCSACSR+YVP+
Sbjct: 678 NFHFVHRSADVGSVVSGTLRSAFEYGGQKCSACSRLYVPQ 717
|
|
| UNIPROTKB|D2D4A3 ALDH4A1 "Mitochondrial aldehyde dehydrogenase 4 family member A1 transcript variant ALDH4A1_v6" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 158/336 (47%), Positives = 206/336 (61%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + GS ER+A+ ALK + +E +P V+G +E T VQYQ VS
Sbjct: 32 VANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQ--VS------ 83
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 84 --PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRA 141
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFYLEVL---ASNLGRGEGLD 198
L G I + + ++ F L + ++N GL+
Sbjct: 142 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE 201
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ F
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 261
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGP+FGDT+T+S +L GINFTGSVPTF LW QV +N++ + FPRL GECGGKNFH
Sbjct: 262 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 321
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
F+H SA+VESVV+GT+RSAFEY GQKCSACSR+YVP
Sbjct: 322 FVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVP 357
|
|
| UNIPROTKB|P30038 ALDH4A1 "Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 158/336 (47%), Positives = 206/336 (61%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + GS ER+A+ ALK + +E +P V+G +E T VQYQ VS
Sbjct: 32 VANEPVLAFTQGSPERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQ--VS------ 83
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 84 --PFNHGHKVAKFCYADKSLLNKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRA 141
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFYLEVL---ASNLGRGEGLD 198
L G I + + ++ F L + ++N GL+
Sbjct: 142 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLE 201
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ F
Sbjct: 202 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 261
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGP+FGDT+T+S +L GINFTGSVPTF LW QV +N++ + FPRL GECGGKNFH
Sbjct: 262 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 321
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
F+H SA+VESVV+GT+RSAFEY GQKCSACSR+YVP
Sbjct: 322 FVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVP 357
|
|
| MGI|MGI:2443883 Aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
Identities = 156/337 (46%), Positives = 208/337 (61%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + GS ER+A+ ALK + +E +P V+G +E T +QYQ +S
Sbjct: 31 VTNEPILAFSQGSPERDALQKALKDLKGQMEAIPCVVGDEEVWTSDIQYQ--LS------ 82
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA +L A+D + L P + L ++L
Sbjct: 83 --PFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQVFLKAADMLSGPRRA 140
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFYLEVL---ASNLGRGEGLD 198
L G I + + ++ F L + ++N GL+
Sbjct: 141 EVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLE 200
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+ EAG+PP ++ F
Sbjct: 201 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 260
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FPRL GECGGKNFH
Sbjct: 261 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFH 320
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
F+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+
Sbjct: 321 FVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPK 357
|
|
| UNIPROTKB|J9P2L3 TAS1R2 "Taste receptor type 1 member 2" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 158/337 (46%), Positives = 203/337 (60%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + GS ER+A+ ALK + E +P V+G +E T L VQYQ
Sbjct: 33 VANEPVLAFTQGSPERDALQKALKDLKGRTEAIPCVVGDEEVWT----------LDVQYQ 82
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALDIVSS------LCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA +L A++ + L P + L ++L
Sbjct: 83 VSPFNHGHKVAKFCYADKALLNRAIEASLAARKEWDLKPVADRAQIFLKAADMLSGPRRA 142
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFY--LEVLAS-NLGRGEGLD 198
L G I + + ++ F L L V S N GL+
Sbjct: 143 EVLAKTMVGQGKTVIQAEIDAAAELIDFLRFNAKFAVELEGQQPLSVPPSTNSVVYRGLE 202
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y++ EAG+PP ++ F
Sbjct: 203 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRVFREAGLPPNIIQF 262
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FPRL GECGGKNFH
Sbjct: 263 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFPRLAGECGGKNFH 322
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
F+H SA+V SVV+GT+RSAFEY GQKCSACSR+YVP+
Sbjct: 323 FVHRSADVGSVVSGTLRSAFEYGGQKCSACSRLYVPQ 359
|
|
| WB|WBGene00000112 alh-6 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 622 (224.0 bits), Expect = 2.0e-69, Sum P(2) = 2.0e-69
Identities = 108/169 (63%), Positives = 141/169 (83%)
Query: 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246
+ N + G++GFVAA++PFNFTAIGGNL PALMG+ LWKPS+TA+LSNY IY+++
Sbjct: 190 ITKNTMQFRGMEGFVAAIAPFNFTAIGGNLPTAPALMGNVSLWKPSNTAVLSNYIIYELL 249
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG+PPG+++F+P+DGPVFGD ITASP+L+ +NFTGSVPTF +W +V +N++ Y FP
Sbjct: 250 EEAGMPPGILSFLPSDGPVFGDVITASPHLSAVNFTGSVPTFKTIWRKVAENLDNYVTFP 309
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+LIGECGGKNFHF+H SA+V++V GT RSA+EY GQKCSACSRMY P+
Sbjct: 310 KLIGECGGKNFHFVHPSAHVDAVAAGTARSAWEYSGQKCSACSRMYAPK 358
|
|
| RGD|1624206 Aldh4a1 "aldehyde dehydrogenase 4 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 702 (252.2 bits), Expect = 3.0e-69, P = 3.0e-69
Identities = 155/337 (45%), Positives = 208/337 (61%)
Query: 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQ 90
V P + GS ER+A+ AL + E +P V+G +E T V+YQ +S
Sbjct: 31 VANEPILAFTQGSPERDALQKALNDLKDQTEAIPCVVGDEEVWTSDVRYQ--LS------ 82
Query: 91 PMPHNHKKKIAKFYYATP-VLKSALD--IVS----SLCPYEKNSVGLLINTEVLHDDLYF 143
P NH K+AKF YA +L A++ +++ L P + L ++L
Sbjct: 83 --PFNHGHKVAKFCYADKALLNKAIEAAVLARKEWDLKPVADRAQIFLKAADMLSGPRRA 140
Query: 144 RCLDDLKYAAGNYYINDK--STGSVVGQQPFGGGRMSALTFYLEVL---ASNLGRGEGLD 198
L G I + + ++ F L + ++N GL+
Sbjct: 141 EILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHVVYRGLE 200
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNF 258
GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+ EAG+PP V+ F
Sbjct: 201 GFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNVIQF 260
Query: 259 VPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318
VPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FPRL GECGGKNFH
Sbjct: 261 VPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFRTFPRLAGECGGKNFH 320
Query: 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
F+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+
Sbjct: 321 FVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPQ 357
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.2.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 428 | |||
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 1e-115 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 1e-109 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 6e-75 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 8e-49 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 3e-45 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 7e-45 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 6e-42 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 5e-40 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 8e-31 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 2e-30 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 1e-29 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 3e-28 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 8e-27 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 8e-27 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 9e-27 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 9e-27 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-25 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 6e-25 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-24 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 4e-24 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 9e-24 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 3e-23 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 4e-23 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 7e-23 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 8e-23 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 9e-23 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-22 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 2e-22 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 3e-22 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 3e-22 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 3e-22 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 5e-22 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-21 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 3e-21 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 3e-21 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 5e-21 | |
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 7e-21 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 7e-21 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 8e-21 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 9e-21 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 2e-20 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 8e-20 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 2e-19 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 5e-19 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 3e-18 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 4e-18 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 5e-18 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 6e-18 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 8e-18 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-17 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 2e-17 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 3e-17 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 3e-17 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 3e-17 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 4e-17 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 6e-17 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 8e-17 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-16 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-16 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 2e-16 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 2e-16 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 3e-16 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 3e-16 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 6e-16 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-15 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-15 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 2e-15 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 2e-15 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 4e-15 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-14 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 3e-14 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 3e-14 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 9e-14 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-13 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-13 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 2e-13 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 3e-13 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 4e-13 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 4e-13 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 5e-13 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 5e-13 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-12 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 2e-12 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 7e-12 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 3e-11 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 3e-11 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 7e-11 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 4e-10 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 4e-10 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 2e-09 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 3e-08 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 4e-08 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 7e-08 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 2e-07 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 2e-07 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 9e-07 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-06 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 3e-06 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 8e-06 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 6e-05 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 9e-05 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 1e-04 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-04 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 4e-04 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 7e-04 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 0.001 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 0.001 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 0.003 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 0.003 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 0.003 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 346 bits (889), Expect = e-115
Identities = 113/162 (69%), Positives = 137/162 (84%)
Query: 196 GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
L+GFV AVSPFNFTAIGGNLA PALMG+ VLWKPSDTA+LSNY +YKI+ EAG+PPGV
Sbjct: 169 PLEGFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGV 228
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+NFVP DGPV GDT+ ASP+LAG++FTGS PTF LW Q+G+N++ Y+ +PR++GE GGK
Sbjct: 229 INFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGK 288
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
NFH +H SA+V+S+V T+R AFEY GQKCSA SR YVPESL
Sbjct: 289 NFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESL 330
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-109
Identities = 156/342 (45%), Positives = 204/342 (59%), Gaps = 43/342 (12%)
Query: 39 YLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKK 98
+ PGS ER+ + ALK + +EE+P+VIG +E T + YQ PHNH+
Sbjct: 8 FRPGSPERDLLRKALKELKGRMEEIPLVIGGEEVWTSGER---------IYQVSPHNHQA 58
Query: 99 KIAKFYYATPVL-----KSALDIVS--SLCP-YEKNSVGL----LINTEVLHDDL----- 141
+AK AT L ++ALD SL P Y++ ++ L L++ + L
Sbjct: 59 VLAKATNATEELANKAVEAALDAKKEWSLLPFYDRAAIFLKAADLLSGPYRAEILAATML 118
Query: 142 ------YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGE 195
Y +D + + N K + QQP T Y
Sbjct: 119 GQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQQPISAPGEWNRTEY-----------R 167
Query: 196 GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
L+GFV A+SPFNFTAI GNLA PALMG++V+WKPSDTA+LSNY + +I+ EAG+PPGV
Sbjct: 168 PLEGFVYAISPFNFTAIAGNLAGAPALMGNTVIWKPSDTAMLSNYLVMRILEEAGLPPGV 227
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+NFVP DGP+ DT+ A P LAGI+FTGS PTF LW QV +N++ Y NFPR++GE GGK
Sbjct: 228 INFVPGDGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQNLDRYHNFPRIVGETGGK 287
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+FH +H SA+VE VV+GTIR AFEY GQKCSACSR+YVP SL
Sbjct: 288 DFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSL 329
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 242 bits (618), Expect = 6e-75
Identities = 90/338 (26%), Positives = 141/338 (41%), Gaps = 47/338 (13%)
Query: 46 REAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFY 104
R A+ AL+RV P+VIG + T+ VS P + +
Sbjct: 1 RRAMREALRRVKEEFGRAYPLVIGGEWVDTKERMVS--VS--------PFAPSEVVGTTA 50
Query: 105 YA-----TPVLKSALDIVSS--LCPYEKNSVGLLINTEVLHD---DLYFRC--------- 145
A L++A + P E + LL ++L +L
Sbjct: 51 KADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNWV 110
Query: 146 --LDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSAL--TFYLEVLASNLGRGEGLDGFV 201
+DD+ A ++ + +FY GL G
Sbjct: 111 EAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFY-----------VGL-GAG 158
Query: 202 AAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP 260
+SP+NF AI + P +G++V+ KP++ A++ Y +++I EAG PPGVV F+P
Sbjct: 159 VVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLP 218
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFI 320
G G +T + GINFTGS+ T +++ + F RL E GGKN +
Sbjct: 219 GVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIV 278
Query: 321 HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+A+ E VV G + SAF + GQKCSA SR+ + + +
Sbjct: 279 DETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY 316
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 171 bits (437), Expect = 8e-49
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 11/163 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A++P+NF + PAL G++V+ KPS+ L+ + ++ EAG+PPGV+N
Sbjct: 128 GVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLN 187
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V G GD + P + ++FTGS G+ I KN R+ E GGK
Sbjct: 188 VVTGSGSEVGDALVEHPDVDKVSFTGSTEV--------GRRIAKAAAKNLKRVTLELGGK 239
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N + A++++ V G + AF GQ C+A SR+ V ES++
Sbjct: 240 NPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIY 282
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 160 bits (407), Expect = 3e-45
Identities = 67/218 (30%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAA 203
R +D +YAAG DK G + P A E L G V
Sbjct: 57 RAIDTFRYAAGLA---DKLGGP---ELPSPDPGGEAYVRR-----------EPL-GVVGV 98
Query: 204 VSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP 260
++P+NF LA PAL G++V+ KPS+ L+ + +++ EAG+PPGVVN VP
Sbjct: 99 ITPWNFPLLLAAWKLA--PALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP 156
Query: 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFI 320
G G + + P + I+FTGS + +N + E GGK+ +
Sbjct: 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAA------ENLKPVTLELGGKSPVIV 210
Query: 321 HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
A++++ V G + AF GQ C+A SR+ V ES++
Sbjct: 211 DEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIY 248
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 160 bits (408), Expect = 7e-45
Identities = 55/163 (33%), Positives = 88/163 (53%), Gaps = 11/163 (6%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V A++P+NF LA PAL G++V+ KPS+ L+ + +++ EAG+PPGV
Sbjct: 98 GVVGAITPWNFPLLLAAWKLA--PALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGV 155
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+N V DG G + + P + I+FTGS + +N+ R+ E GGK
Sbjct: 156 LNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENL------KRVTLELGGK 209
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A++++ V G + AF GQ C+A SR+ V ES++
Sbjct: 210 SPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIY 252
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 154 bits (392), Expect = 6e-42
Identities = 61/161 (37%), Positives = 91/161 (56%), Gaps = 1/161 (0%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A +SP+NF AI + + G++V+ KP++ + + +I+ EAG+PPGVVN
Sbjct: 168 GVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVN 227
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
F+P G GD + P + I FTGS R++ + K K R+I E GGKN
Sbjct: 228 FLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNA 287
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+++ G +RSAF + GQKCSACSR+ V ES++
Sbjct: 288 IIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVY 328
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 5e-40
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A++P+NF A+ G++V+ KPS+ LS + ++ EAG+P GV+N
Sbjct: 135 GVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLN 194
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G GD + A P + I+FTGS + N + E GGK+
Sbjct: 195 VVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIA------AAAAANLKPVTLELGGKSP 248
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ A++++ V+ + AF GQ+C+A SR+ V ES
Sbjct: 249 AIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHES 287
|
Length = 472 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 8e-31
Identities = 56/169 (33%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G +SP+NF AI + + G++VL KP+ + +++ EAG+P GVVN
Sbjct: 173 GVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVN 232
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--------KNFPRLI 309
FVP G GD + P I FTGS +VG I R+I
Sbjct: 233 FVPGSGSEVGDYLVDHPKTRFITFTGS--------REVGLRIYERAAKVQPGQIWLKRVI 284
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK+ + A+++ + SAF + GQKCSACSR V E ++
Sbjct: 285 AEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY 333
|
Length = 514 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 2e-30
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 199 GFVAAVSPFNF-TAIGG-NLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V ++P+NF AI +A PAL G++V++KP++ S + + +I+ EAG+P GV
Sbjct: 137 GVVGLITPWNFPIAIPAWKIA--PALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGV 194
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGECG 313
N V G G + P + ++FTGS VG+ I R+ E G
Sbjct: 195 FNLVMGSGSEVGQALVEHPDVDAVSFTGSTA--------VGRRIAAAAAARGARVQLEMG 246
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GKN + A+++ V ++ AF GQ+C+A SR+ V E +
Sbjct: 247 GKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGI 290
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 119 bits (302), Expect = 1e-29
Identities = 56/166 (33%), Positives = 80/166 (48%), Gaps = 16/166 (9%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G +SP+NF G A AL G++V+ KP++ L +++ EAGVP
Sbjct: 169 GVFVCISPWNFPLAIFTGQIAA---ALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRD 225
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPT---FNRLWLQVGKNINVYKNFPRLIGE 311
V+ VP DG G+ + A P + G+ FTGS T NR L LI E
Sbjct: 226 VLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLINR-AL-----AERDGPILPLIAE 279
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GGKN + ++A E V ++SAF GQ+CSA +Y+ E +
Sbjct: 280 TGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEI 325
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 116 bits (291), Expect = 3e-28
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 199 GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G +SP+NF AI + P + G+ V+ KP++ A + +I+ EAG+P GVV
Sbjct: 169 GVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQ 228
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
FVP G GD + P + I FTGS R++ + K K+ R+I E GGK+
Sbjct: 229 FVPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQKHLKRVIAEMGGKDT 288
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A++E SAF + GQKCSA SR V E ++
Sbjct: 289 VIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVY 329
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 8e-27
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 38/221 (17%)
Query: 149 LKYAAGNYYIN----DKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAV 204
++Y A Y DK G+V+ P G T R E L G VAA+
Sbjct: 82 VRYLAEWYRYYAGLADKIEGAVI---PVDKGDYLNFT-----------RREPL-GVVAAI 126
Query: 205 SPFN----FTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFV 259
+P+N A LA PAL G++V+ KPS+ S + K+ EAG PPGVVN V
Sbjct: 127 TPWNSPLLLLA--KKLA--PALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVV 182
Query: 260 PADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGKNF 317
GP G+ + P +A I FTG + G++I +N + E GGK+
Sbjct: 183 TGFGPETGEALVEHPLVAKIAFTGGT--------ETGRHIARAAAENLAPVTLELGGKSP 234
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A++++ VNG + F GQ C A SR+ V S++
Sbjct: 235 NIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY 275
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 8e-27
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 31/228 (13%)
Query: 134 TEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGR 193
D+ R D +Y AG DK G V+ + L + +
Sbjct: 74 RAARRLDVP-RAADTFRYYAG---WADKIEGEVIPVRG------PFLNYTVR-------- 115
Query: 194 GEGLDGFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
E + G V A+ P+NF + PAL G++V+ KP++ LS I ++M EAG P
Sbjct: 116 -EPV-GVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFP 173
Query: 253 PGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIG 310
GV+N V G V G + P + I FTGS VG+ I N R+
Sbjct: 174 AGVLNVVTGFGEVAGAALVEHPDVDKITFTGST--------AVGRKIMQGAAGNLKRVSL 225
Query: 311 ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK+ + + A A++++ V F GQ C+A SR+ V ES++
Sbjct: 226 ELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY 273
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-27
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA ++PFN+ I AL G++V+ KPS+ + I +IM EAG+P GV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGK 315
V G GD + P + + FTGS VG+ I ++ ++ E GGK
Sbjct: 181 VVTGGGAEVGDELVDDPRVRMVTFTGSTA--------VGREIAEKAGRHLKKITLELGGK 232
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF-CFCSCF 364
N + A A+++ V AF + GQ C + SR+ V E ++ F F
Sbjct: 233 NPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKF 282
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 9e-27
Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G V A++PFNF A I +A +G+SV+ KPS L+ + KI+ EAG+P
Sbjct: 125 GVVGAITPFNFPANLFAHKIAPAIA-----VGNSVVVKPSSNTPLTAIELAKILEEAGLP 179
Query: 253 PGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIG 310
PGV+N V G GD I +P + I+FTGS VG I ++
Sbjct: 180 PGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTA--------VGLLIASKAGGTGKKVAL 231
Query: 311 ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GG + + A++E V+ +R FE GQ C+A R+ V E ++
Sbjct: 232 ELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY 279
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 1e-25
Identities = 62/161 (38%), Positives = 90/161 (55%), Gaps = 10/161 (6%)
Query: 199 GFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGVPPG 254
G V +SP+NF AI G +A AL G+SVL KP++ T L++ + +++ EAGVPPG
Sbjct: 238 GPVVCISPWNFPLAIFTGQIA--AALAAGNSVLAKPAEQTPLIAAQAV-RLLHEAGVPPG 294
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
V+ +P G G +TA +AG+ FTGS + Q+ K + P LI E GG
Sbjct: 295 VLQLLPGRGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQG--RPIP-LIAETGG 351
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+N + +SA E VV + SAF+ GQ+CSA + + E
Sbjct: 352 QNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQE 392
|
Length = 769 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 106 bits (266), Expect = 6e-25
Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 20/168 (11%)
Query: 199 GFVAAVSPFNF-TAIGG-NLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GV 251
G V ++ FNF A+ G N A AL+ G++V+WKPS+T L+ + KI+ E G+
Sbjct: 135 GVVGVITAFNFPVAVPGWNAA--IALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGL 192
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLI 309
PPGVVN V G G+ + P + ++FTGS +VG+ + V + F R++
Sbjct: 193 PPGVVNLVTGGGDG-GELLVHDPRVPLVSFTGST--------EVGRRVGETVARRFGRVL 243
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
E GG N + A+++ V + +A GQ+C+ R+ V ES+
Sbjct: 244 LELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESV 291
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 1e-24
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 256
G V +SPFNF I + PAL +G++V+ KP T + I +I EAG+P GV+
Sbjct: 100 GVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVL 159
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGG 314
N VP G GD + P + I+FTGS VG++I ++ ++ E GG
Sbjct: 160 NVVPGGGSEIGDALVEHPRVRMISFTGSTA--------VGRHIGELAGRHLKKVALELGG 211
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N + A+++ V+ AF + GQ C A R+ V ES++
Sbjct: 212 NNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVY 255
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 53/164 (32%), Positives = 83/164 (50%), Gaps = 13/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V AV P+NF + PAL G+SV+ KP++ + L+ + ++ +EAG+P GV+N
Sbjct: 126 GVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLN 185
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
VP G G+ + + + FTGS VG+ Y N R+ ECGG
Sbjct: 186 VVPGFGHTAGEALGLHMDVDALAFTGSTE--------VGRRFLEYSGQSNLKRVWLECGG 237
Query: 315 KNFHFIHASA-NVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
K+ + + A A ++++ F G+ CSA SR+ V ES+
Sbjct: 238 KSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESI 281
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 102 bits (257), Expect = 9e-24
Identities = 60/189 (31%), Positives = 89/189 (47%), Gaps = 24/189 (12%)
Query: 173 GGGRMSALTFYLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKP 231
G R +A T V G VA + P+NF+ + AL G +++ KP
Sbjct: 130 QGERYTAFTRREPV------------GVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKP 177
Query: 232 SDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRL 291
S+ L+ + ++ EAG+P GV+N V G V G + + P +A ++FTGSV T
Sbjct: 178 SEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAV-GAQLISHPDVAKVSFTGSVAT---- 232
Query: 292 WLQVGKNIN--VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
GK I + R+ E GGKN A+++ VV G + + F + GQ C+A
Sbjct: 233 ----GKKIGRQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPE 288
Query: 350 RMYVPESLF 358
R YV S F
Sbjct: 289 RFYVHRSKF 297
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-23
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G ++P+N+ + PAL G++V+ KPS+ L+ +++++ EAG+P GVVN
Sbjct: 136 GVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVN 195
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V G G + SP + ++FTG G++I N ++ E GGK
Sbjct: 196 LVTGSGATVGAELAESPDVDLVSFTGG--------TATGRSIMRAAAGNVKKVALELGGK 247
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
N + + A A+ E+ V+ + F GQ CSA SR+ V ES+
Sbjct: 248 NPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESI 289
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 4e-23
Identities = 64/173 (36%), Positives = 94/173 (54%), Gaps = 25/173 (14%)
Query: 192 GRGEGLDGFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMI 247
GRG FV +SP+NF AI G +A AL G++V+ KP++ T L++ + K++
Sbjct: 684 GRGV----FVC-ISPWNFPLAIFLGQVA--AALAAGNTVIAKPAEQTPLIAAEAV-KLLH 735
Query: 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KN 304
EAG+P V+ +P DG G +TA P +AG+ FTGS T IN ++
Sbjct: 736 EAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARI--------INRTLAARD 787
Query: 305 FP--RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
P LI E GG+N + ++A E VV+ + SAF GQ+CSA ++V E
Sbjct: 788 GPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQE 840
|
Length = 1038 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 7e-23
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLA---YTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G VAA++PFNF NL PA+ G++V+ KP+ LS + ++++EAG+P G
Sbjct: 125 GVVAAITPFNFPL---NLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKG 181
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
+N V G GD + P + I+FTGS VG+ I ++ E G
Sbjct: 182 ALNVVTGSGETVGDALVTDPRVRMISFTGSP--------AVGEAIARKAGLKKVTLELGS 233
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A A++E V + AF GQ C + R++V E ++
Sbjct: 234 NAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY 277
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 8e-23
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 11/162 (6%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G VA + P+NF I LA PAL+ G++++ KPS+ L+ +++ EAG+P GV
Sbjct: 135 GVVAGILPWNFPFFLIARKLA--PALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGV 192
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+N V G V GD + A P + I+ TGS ++ +NI ++ E GGK
Sbjct: 193 LNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENIT------KVSLELGGK 246
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ A+++ V + S CGQ C+ R+YV E +
Sbjct: 247 APAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDI 288
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 9e-23
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 27/171 (15%)
Query: 199 GFVAAVSPFNF--------TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA 249
G ++P+N A PAL G++V+ KPS+ L+ + + ++ EA
Sbjct: 119 GVAGLITPWNLPLMLLTWKIA--------PALAFGNTVVLKPSEWTPLTAWLLAELANEA 170
Query: 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPR 307
G+PPGVVN V GP G + A P + I+FTG T G+ I N
Sbjct: 171 GLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETAT--------GRTIMRAAAPNLKP 222
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ E GGKN + + A A+++ V+ +RS+F G+ C A SR+ V S++
Sbjct: 223 VSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY 273
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 99.5 bits (249), Expect = 1e-22
Identities = 57/163 (34%), Positives = 85/163 (52%), Gaps = 15/163 (9%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G ++P+N+ I +A PAL G +V+ KPS+ A LS + +I+ EAG+P GV
Sbjct: 132 GVCGLITPWNWPLNQIVLKVA--PALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGV 189
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECG 313
N V DGPV G+ ++A P + ++FTGS GK + R+ E G
Sbjct: 190 FNLVNGDGPVVGEALSAHPDVDMVSFTGSTR--------AGKRVAEAAADTVKRVALELG 241
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GK+ + I A++E V + + F GQ C+A +RM VP S
Sbjct: 242 GKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRS 284
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 2e-22
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 13/164 (7%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
G VA ++P+NF AI + PAL+ G++V++KP++ + ++ EAG+PPGVV
Sbjct: 137 GVVALITPWNFPVAIPSWKIF-PALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVV 195
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGECGG 314
N V G G+ + P + ++FTGS +VG+ I + R+ E GG
Sbjct: 196 NVVHGRGEEVGEALVEHPDVDVVSFTGS--------TEVGERIGETCARPNKRVALEMGG 247
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
KN + A+++ + G + SAF GQ+C+A SR+ V ES++
Sbjct: 248 KNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY 291
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 98.4 bits (245), Expect = 3e-22
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 199 GFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSD-TALLSNYTIYKIMIEAGVPPGVV 256
G +SP+NF AI G++V+ KP++ T+L++ + ++M EAG P G +
Sbjct: 162 GVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAV-ELMQEAGFPAGTI 220
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP-RLIGECGGK 315
+P G G +T+ P +AG+ FTGS + + + ++ P LI E GG+
Sbjct: 221 QLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLI----NQTLAQREDAPVPLIAETGGQ 276
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
N + ++A E VV +RSAF+ GQ+CSA + V E
Sbjct: 277 NAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQE 316
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 98.3 bits (245), Expect = 3e-22
Identities = 52/163 (31%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 199 GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V A++PFNF + LA PA+ G V+ KP+ LS + KI++EAGVP GV
Sbjct: 125 GVVLAITPFNFPLNLVAHKLA--PAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGV 182
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ V + V GD A +A ++FTGS L G R+ E GG
Sbjct: 183 LQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG--------GKRIALELGGN 234
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A++++ + + F + GQ C + R+YV E L+
Sbjct: 235 APVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY 277
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 3e-22
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLA-YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
G VAA++P+NF NLA PAL G++V+ KP+ LS + +I+ E +P GVV
Sbjct: 125 GVVAAITPWNF-PFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVV 183
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKN 316
N V G+ +T P + ++FTGS R+ Q + R++ E GGK+
Sbjct: 184 NVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLK------RVLLELGGKS 237
Query: 317 FHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A++ + + GQ C+ +R+ VP S +
Sbjct: 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY 279
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 97.3 bits (243), Expect = 5e-22
Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYT---PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V A+ PFN+ NL + PAL MG++V++KP+ +L + + +AG P G
Sbjct: 143 GVVLAIGPFNYPL---NLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKG 199
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
VVN V G GD + + I+FTGS NRL Q RL+ E GG
Sbjct: 200 VVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHPMK--------RLVLELGG 251
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
K+ + A++E ++ A Y GQ+C+A R+ V ES
Sbjct: 252 KDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHES 293
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 1e-21
Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + +N+ + PAL G+++++KPS+ L+ + +IM EAG+P GV N
Sbjct: 135 GVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFN 194
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V DG G + P +A ++FTG VPT GK I + + E GGK
Sbjct: 195 VVQGDGAEVGPLLVNHPDVAKVSFTGGVPT--------GKKIMAAAAGHLKHVTMELGGK 246
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354
+ + A++ES V+G + F GQ CS +R++V
Sbjct: 247 SPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVH 285
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 3e-21
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 149 LKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAVSPFN 208
L+Y AG DK G + P G + A T R E + G + P+N
Sbjct: 112 LRYYAG---WADKIQGKTI---PIDGNFL-AYT-----------RREPI-GVCGQIIPWN 152
Query: 209 FTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFG 267
F + PAL G++V+ KP++ LS + +++ EAG PPGVVN VP GP G
Sbjct: 153 FPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAG 212
Query: 268 DTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGGKNFHFIHASA 324
I++ + I FTGS VG+ I N ++ E GGK+ + + A
Sbjct: 213 AAISSHMDVDKIAFTGST--------AVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDA 264
Query: 325 NVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+++ V F GQ C A SR++V ES++
Sbjct: 265 DLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY 298
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 3e-21
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 199 GFVAAVSPFN---FTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V ++P+N TA+ A PAL+ G++V+ K S L EAG+P G
Sbjct: 118 GVVLIIAPWNYPYLTAVN---AVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEG 174
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG---E 311
V + + A P + ++FTGSV + R I E
Sbjct: 175 VFQVLHLSHET-SAALIADPRIDHVSFTGSVAGGRAIQRAAA---------GRFIKVGLE 224
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GGK+ ++ A++++ + AF GQ C + R+YV ES++
Sbjct: 225 LGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY 271
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 5e-21
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 25/167 (14%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKP-SDTALLSNYTIYKIMIEAGVPP 253
G V +SP+N+ A+ + PAL+ G++V+ KP S T L + + +++ EAG+P
Sbjct: 156 GVVGVISPWNYPLTLAVSDAI---PALLAGNAVVLKPDSQTPLTALAAV-ELLYEAGLPR 211
Query: 254 GVVNFVPADGPVFGDTITA-SPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG-- 310
+ V GPV G + + YL FTGS T L Q G+ RLIG
Sbjct: 212 DLWQVVTGPGPVVGTALVDNADYLM---FTGSTATGRVLAEQAGR---------RLIGFS 259
Query: 311 -ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
E GGKN + A+++ G +R+ F GQ C + R+YV ES
Sbjct: 260 LELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHES 306
|
Length = 524 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 94.0 bits (235), Expect = 7e-21
Identities = 58/179 (32%), Positives = 84/179 (46%), Gaps = 30/179 (16%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-----------GSSVLWKPSDTALLSNYTIYKIMI 247
G VAA++P+NF PA M G +V+ KP++ LS + ++
Sbjct: 119 GVVAAITPWNF----------PAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAE 168
Query: 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307
EAG+P GV+N V G+ + ASP + I+FTGS L Q + K R
Sbjct: 169 EAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTV---K---R 222
Query: 308 LIGECGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF-CFCSCF 364
+ E GG N FI A+++ V+G I S F GQ C +R+YV ES++ F
Sbjct: 223 VSLELGG-NAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKL 280
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 7e-21
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 15/163 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGVPPGVV 256
G +A PFNF N PAL+ G++V++KPS+ T ++ + ++ EAG+PPGV+
Sbjct: 99 GVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMV-ELWEEAGLPPGVL 157
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN-VYKNFPRLIG--ECG 313
N V G+ + A + G+ FTGS G ++ + P I E G
Sbjct: 158 NLVQGGRET-GEALAAHEGIDGLLFTGSA--------ATGLLLHRQFAGRPGKILALEMG 208
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
G N + A++++ ++SAF GQ+C+ R+ VP+
Sbjct: 209 GNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDG 251
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 8e-21
Identities = 56/176 (31%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKP-SDTALLSNYTIYKIMIEAGVPP 253
G V +SP+N+ A+ + PAL+ G++V+ KP S TAL + + + +++IEAG+P
Sbjct: 120 GVVGVISPWNYPLTLAVSDAI---PALLAGNAVVLKPDSQTALTALWAV-ELLIEAGLPR 175
Query: 254 GVVNFVPADGPVFGDTITA-SPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG-- 310
+ V G G I + Y+ FTGS T + + G+ RLIG
Sbjct: 176 DLWQVVTGPGSEVGGAIVDNADYVM---FTGSTATGRVVAERAGR---------RLIGCS 223
Query: 311 -ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC-FCSCF 364
E GGKN + A+++ G +R+ F GQ C + R+YV ES++ F F
Sbjct: 224 LELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRF 279
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 94.9 bits (237), Expect = 9e-21
Identities = 60/167 (35%), Positives = 88/167 (52%), Gaps = 22/167 (13%)
Query: 199 GFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSD-TALLSNYTIYKIMIEAGVPPG 254
G V +SP+NF AI G +A AL+ G++VL KP++ T L++ + +++ EAGVP
Sbjct: 678 GPVVCISPWNFPLAIFTGQIA--AALVAGNTVLAKPAEQTPLIAARAV-RLLHEAGVPKD 734
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN------VYKNFPRL 308
+ +P DG G + A P +AG+ FTGS +V + I P L
Sbjct: 735 ALQLLPGDGRTVGAALVADPRIAGVMFTGST--------EVARLIQRTLAKRSGPPVP-L 785
Query: 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
I E GG+N + +SA E VV I SAF+ GQ+CSA + + E
Sbjct: 786 IAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQE 832
|
Length = 1208 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 92.7 bits (231), Expect = 2e-20
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G + P+N+ G ++A PAL G++V+ KP++ A L+ + ++ EAG+P G
Sbjct: 119 GVTGHIIPWNYPLQITGRSVA--PALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGA 176
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECG 313
+N V G G + A P + I+FTGSV T G + +N + E G
Sbjct: 177 LNVVTGLGAEAGAALVAHPGVDHISFTGSVET--------GIAVMRAAAENVVPVTLELG 228
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK+ + A A++E+ + + + + GQ CSA SR+ V S++
Sbjct: 229 GKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY 273
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 8e-20
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VAA+ P+NF + PAL+ G++V+ KPS L + ++ E +PPGV+N
Sbjct: 116 GVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLN 174
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V + G +T+ P + I+FTGS T GK + + K R+ E GG
Sbjct: 175 VVSGGDEL-GPALTSHPDIRKISFTGSTAT--------GKKVMASAAKTLKRVTLELGGN 225
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + ++++V AF GQ C+A R+YV ES++
Sbjct: 226 DAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY 268
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 2e-19
Identities = 63/160 (39%), Positives = 83/160 (51%), Gaps = 21/160 (13%)
Query: 199 GFVAAVSPFNFT-AI-GGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V +SP+NF AI G +A AL G+SVL KP++ L +I++EAGVP GV
Sbjct: 770 GPVVCISPWNFPLAIFTGQVA--AALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGV 827
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGS--VPTF------NRLWLQVGKNINVYKNFPR 307
V +P G G + A + G+ FTGS V RL Q G+ I P
Sbjct: 828 VQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQ-GRPI------P- 879
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSA 347
LI E GG+N + +SA E VV + SAF+ GQ+CSA
Sbjct: 880 LIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSA 919
|
Length = 1318 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 199 GFVAAVSPFN----FTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G VA + FN F A +A P G++V+ KP + A LS + ++ E +PPG
Sbjct: 118 GVVARIVAFNHPLMFAA--AKIA-APLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPG 173
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
V N +P DG G + P + I GSVPT + + I + E GG
Sbjct: 174 VFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIK------HVTLELGG 227
Query: 315 KNFHFIHASANVESVVNGTIRSA-FEYCGQKCSACSRMYVPESLF 358
KN + A+ E+ + + F +CGQ C + SR++V ES++
Sbjct: 228 KNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY 272
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 3e-18
Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 11/161 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA P+NF N PAL+ G++V++KPS+ K+ +AG+P GV+N
Sbjct: 136 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLN 195
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG--ECGGK 315
V G G + A P + G+ FTGS T L Q P I E GG
Sbjct: 196 LVQG-GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQ-------PEKILALEMGGN 247
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
N I A++++ V+ I+SAF GQ+C+ R+ VP+
Sbjct: 248 NPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQG 288
|
Length = 487 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 85.9 bits (213), Expect = 4e-18
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLAY-----TPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G V A++P+NF LA PAL G +V+ KPS+ L+ ++ ++AG+P
Sbjct: 162 GVVGAITPWNFP-----LAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIP 216
Query: 253 PGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGEC 312
PGV+N V D P GD + ASP + I FTGS +L + R+ E
Sbjct: 217 PGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAATVK------RVSLEL 270
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GG + A+++ V G + S F GQ C +R+ V E ++
Sbjct: 271 GGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY 316
|
Length = 498 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 5e-18
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 12/140 (8%)
Query: 220 PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278
PAL G+++++KPS L+ + +I+ EAG+P GV N V G G + P +A
Sbjct: 139 PALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGET-GQLLCEHPDVAK 197
Query: 279 INFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRS 336
++FTGSVPT GK + K + E GGK+ I A++E+ VNG + +
Sbjct: 198 VSFTGSVPT--------GKKVMSAAAKGIKHVTLELGGKSPLIIFDDADLENAVNGAMMA 249
Query: 337 AFEYCGQKCSACSRMYVPES 356
F GQ CS +R++V S
Sbjct: 250 NFLSQGQVCSNGTRVFVQRS 269
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 85.0 bits (211), Expect = 6e-18
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 256
G V +SPFNF I + PAL +G++V+ KP T + I ++ EAG+P GV+
Sbjct: 112 GVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVL 171
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGG 314
+ +P G+ + P +A I+FTGS VG+ + ++ ++ E GG
Sbjct: 172 HVLPGGADA-GEALVEDPNVAMISFTGST--------AVGRKVGEAAGRHLKKVSLELGG 222
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
KN + A+++ + AF + GQ C A R V ES+
Sbjct: 223 KNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESV 265
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 8e-18
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLA---YTPAL-MGSSVLWKP-SDTALLSNYTIYKIMIEAGVPP 253
G V +SP+NF +L+ PAL +G++V+ KP SDT + + KI EAG+P
Sbjct: 132 GVVGVISPWNFPL---HLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPK 188
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGE 311
GV+N V G GD P I+FTGS P VG++I ++ ++ E
Sbjct: 189 GVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTP--------VGRHIGELAGRHLKKVALE 240
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GG N + A++++ VN + F + GQ C A +R+ V E ++
Sbjct: 241 LGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY 287
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N I G A L G++V+ K S+ + +++ I ++ EAG+P GV+N
Sbjct: 100 GVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLN 159
Query: 258 FV---PADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGEC 312
V P D P + + A P + +NFTGS +VG+ I K+ ++ E
Sbjct: 160 VVTHSPEDAPEVVEALIAHPAVRKVNFTGST--------RVGRIIAETAAKHLKPVLLEL 211
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GGK + A++++ N + AF GQ C + R+ V ES
Sbjct: 212 GGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHES 255
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 2e-17
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 20/168 (11%)
Query: 199 GFVAAVSPFNF-TAIGG-NLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GV 251
G V ++ FNF A+ G N A AL+ G+ V+WKPS T L+ + KI+ G+
Sbjct: 134 GVVGVITAFNFPVAVWGWNAAI--ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGL 191
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGK--NINVYKNFPRLI 309
P + + V V G+ + P + ++FTGS VG+ V F R +
Sbjct: 192 PGAIASLVCGGADV-GEALVKDPRVPLVSFTGST--------AVGRQVGQAVAARFGRSL 242
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
E GG N + A+++ V + +A GQ+C+ R+ V ES+
Sbjct: 243 LELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESI 290
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 83.2 bits (206), Expect = 3e-17
Identities = 50/163 (30%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V +SP+N + PAL G++V+ KPS+ + + ++M GVP GV N
Sbjct: 141 GVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYN 200
Query: 258 FVPADGP-VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG-ECGGK 315
V GP G+ +T P + I FTG T + + + + + E GGK
Sbjct: 201 VVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAAADGV-------KPVSFELGGK 253
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N + A + ++ V G +RSAF GQ C R+YV +F
Sbjct: 254 NAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF 296
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 83.0 bits (206), Expect = 3e-17
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VAA+ P+N L PAL G +V+ KPS L Y + + EAG+PPGVVN
Sbjct: 139 GVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVN 198
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGK 315
VPAD V G+ + P + ++FTGS G+ I + R+ E GGK
Sbjct: 199 VVPADREV-GEYLVRHPGVDKVSFTGST--------AAGRRIAAVCGERLARVTLELGGK 249
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ + A++++ V G + ++ GQ C A +R+ VP S
Sbjct: 250 SAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRS 290
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 82.9 bits (205), Expect = 3e-17
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 8/162 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A AL G +V+ KP++ LS + ++ +AG+P GV+N
Sbjct: 119 GVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLN 178
Query: 258 FVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKN 316
+ G+ +T SP + I+FTGS L Q + ++ E GG
Sbjct: 179 VITGSRAKEVGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVK------KVSMELGGNA 232
Query: 317 FHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+++ V G + S F GQ C +R+YV + ++
Sbjct: 233 PFIVFDDADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY 274
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 4e-17
Identities = 53/160 (33%), Positives = 81/160 (50%), Gaps = 7/160 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+NF + PAL G +V+ KPS+ L+ + +I EAG+PPGV+N
Sbjct: 122 GVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLN 181
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + A P + I+FTGS T +++ ++I + E GGK+
Sbjct: 182 VVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIK------PVSLELGGKSP 235
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ A++E V + F GQ CSA SR+ V ES+
Sbjct: 236 IIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESI 275
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 82.2 bits (203), Expect = 6e-17
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N + PAL G++V+ KP++ + L+ + +I EAG+P GV N
Sbjct: 137 GPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFN 196
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + A P + ++FTG T + + + R E GGK+
Sbjct: 197 LVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRNGADTLK------RFSMELGGKSP 250
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A++E ++ + F + G++C+A SR+ V ES+
Sbjct: 251 VIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA 291
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 8e-17
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA ++P+N+ + PAL G++V+ KPS+T L+ + ++ E +PPGVVN
Sbjct: 120 GVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVN 178
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V G GD + A P + ++ TGSV T GK + R+ E GGK
Sbjct: 179 VVCGGGASAGDALVAHPRVRMVSLTGSVRT--------GKKVARAAADTLKRVHLELGGK 230
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A++++ V G + + GQ C+A R+YV ES++
Sbjct: 231 APVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY 273
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 1e-16
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V A+ P+N + L PAL G++V+ K ++ A L+ + +I+ + +P GV+N
Sbjct: 119 GVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLN 177
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG---ECGG 314
+ G G + P + + FTGS +VGK I RLI E GG
Sbjct: 178 VITGYGEECGAALVDHPDVDKVTFTGST--------EVGKII-YRAAADRLIPVSLELGG 228
Query: 315 KNFHFIHASANVESVVNGTIRSA-FEYCGQKCSACSRMYVPESLF 358
K+ + A+++ V+G I F GQ C+A SR++V E ++
Sbjct: 229 KSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY 273
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 81.0 bits (201), Expect = 1e-16
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-------GSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G VA ++PFNF A+ P M G++ + KPS+ + + +++ EAG+
Sbjct: 138 GVVAGITPFNFPAM------IPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGL 191
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY----KNFPR 307
P GV+N V + + P + ++F GS P VG+ I Y N R
Sbjct: 192 PDGVLNVVHGGKEA-VNALLDHPDIKAVSFVGSTP--------VGEYI--YERAAANGKR 240
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ G KN + A++E N + +AF GQ+C A S
Sbjct: 241 VQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALS 282
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVV 256
G V ++P+NF + L + A G +V+ KPS+ + + +++IEAG+P GVV
Sbjct: 121 GVVGIITPWNFPFLILSQKLPFALA-AGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVV 179
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGG 314
N V G G +T P + ++FTGS VGK I +N ++ E GG
Sbjct: 180 NIVTGYGATVGQAMTEHPDVDMVSFTGSTR--------VGKAIAAAAARNLKKVSLELGG 231
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
KN + A A++++ + + + G+ C++ SR+ V ES+
Sbjct: 232 KNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESI 274
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 80.9 bits (200), Expect = 2e-16
Identities = 52/161 (32%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+N+ PAL G++V+ KP++ LS ++ EAG PPGVVN
Sbjct: 146 GVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVN 205
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+P G V G + P + I FTGS T RL ++ N + ECGGK+
Sbjct: 206 IIPGYGAVAGSALAEHPDVDKIAFTGSTAT-GRLVMKAAAQ-----NLKAVTLECGGKSP 259
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+++ V GQ C+A SR+YV ES++
Sbjct: 260 ALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY 300
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 80.3 bits (199), Expect = 3e-16
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94
P +Y PGS ER + AL + S E+P+VIG KE +T + Q MPH
Sbjct: 5 PVLSYAPGSPERAKLQEALAELKSLTVEIPLVIGGKEVRTG----------NTGKQVMPH 54
Query: 95 NHKKKIAKFYYATPVL 110
+H +A ++YA L
Sbjct: 55 DHAHVLATYHYADAAL 70
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 80.1 bits (198), Expect = 3e-16
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + PAL MG++V+ KP++ L+ +I EAG+PPGV+N
Sbjct: 149 GVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLN 208
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGECGGK 315
V +G FG + P + + FTGS VG+ + +L E GGK
Sbjct: 209 IVTGNGS-FGSALANHPGVDKVAFTGSTE--------VGRALRRATAGTGKKLSLELGGK 259
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A+++S V G + + + GQ C A SR+ V ES+
Sbjct: 260 SPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA 302
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 6e-16
Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 7/159 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA P+NF N PAL+ G++V++KPS+ K+ +AG+P GV+N
Sbjct: 134 GVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLN 193
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G + A P + G+ FTGS T + L Q L E GG N
Sbjct: 194 LVQG-ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKI-----LALEMGGNNP 247
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ A++++ V+ I+SAF GQ+C+ R+ VP+
Sbjct: 248 LIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDG 286
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 78.5 bits (194), Expect = 1e-15
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 12/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++V+ KP++ L+ + ++ EAG PPGVVN
Sbjct: 147 GVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVN 206
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINV---YKNFPRLIGECGG 314
VP GP G I++ P + + FTGS +VGK I N R+ E GG
Sbjct: 207 VVPGYGPTAGAAISSHPDIDKVAFTGST--------EVGKLIQQAAGKSNLKRVTLELGG 258
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K+ + + A A+++ V + F GQ C A SR +V ES++
Sbjct: 259 KSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY 302
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.0 bits (193), Expect = 1e-15
Identities = 44/141 (31%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 220 PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278
PAL G+++++KPS+ L+ + +I EAG+P GV N V DG V G +T P +A
Sbjct: 165 PALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRV-GAWLTEHPDIAK 223
Query: 279 INFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRS 336
++FTG VPT GK + + + E GGK+ + A+++ + + +
Sbjct: 224 VSFTGGVPT--------GKKVMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLA 275
Query: 337 AFEYCGQKCSACSRMYVPESL 357
F GQ C+ +R++V +S+
Sbjct: 276 NFYSSGQVCTNGTRVFVQKSI 296
|
Length = 488 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.0 bits (192), Expect = 2e-15
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G +AA+ P+NF + PAL G+SV+ KPS+ + LS + + EAG+P GV+N
Sbjct: 159 GVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLN 218
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G ++ + I FTGS T +L G + N R+ E GGK+
Sbjct: 219 VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDS-----NMKRVWLEAGGKSA 273
Query: 318 HFIHASA-NVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ + A +++ + T F GQ C A +R+ + ES+
Sbjct: 274 NIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESI 314
|
Length = 494 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 77.4 bits (191), Expect = 2e-15
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYT---PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V A++PFN N PA+ + ++ KPS+ LS + ++ EAG+PP
Sbjct: 122 GVVLAITPFNHPL---NQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPD 178
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
+++ V + GD + P + + FTG V VGK I + R + E GG
Sbjct: 179 MLSVVTGEPGEIGDELITHPDVDLVTFTGGVA--------VGKAIAATAGYKRQLLELGG 230
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ + A++E + ++ GQ+C+A R+ V ES
Sbjct: 231 NDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHES 272
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 4e-15
Identities = 24/33 (72%), Positives = 27/33 (81%)
Query: 146 LDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
D L+ AAGN+YINDK TG+VVGQQPFGG R S
Sbjct: 463 TDALRNAAGNFYINDKPTGAVVGQQPFGGARAS 495
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 1e-14
Identities = 52/161 (32%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++++ KPS+ LS + K++ EAG PPGV+N
Sbjct: 146 GVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVIN 205
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G+ I++ + + FTGS R ++ N+ K + E GGK+
Sbjct: 206 VVSGYGRTCGNAISSHMDIDKVAFTGST-LVGRKVMEAAAKSNLKK----VTLELGGKSP 260
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A++ES V T F GQ C A SR+YV E ++
Sbjct: 261 NIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY 301
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 3e-14
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 13/166 (7%)
Query: 195 EGLDGFVAAVSPFN--FTAIGGNLAYTPALMGSS-VLWKPSDTALLSNYTIYKIMIEAGV 251
E L G ++A++PFN + +A PA+ ++ ++ KPS+ LS + I+ EAG+
Sbjct: 137 EPLLGVISAITPFNHPMNQVAHKIA--PAIATNNRMVVKPSEKTPLSALYLADILYEAGL 194
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
PP ++ V D D + +P++ + FTG V +GK I + R + E
Sbjct: 195 PPQMLQVVTGDPREIADELITNPHVDLVTFTGGVA--------IGKYIAARAGYRRQVLE 246
Query: 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GG + + A+++ + ++ +++ GQ+C+A RM V ES+
Sbjct: 247 LGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESV 292
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 73.9 bits (182), Expect = 3e-14
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 12/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA-GVPPGVV 256
G + P+N + + PAL G +V+ KP+ N I +I+ E +P GVV
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGG 314
N G + ASP + I+FTGS T G+ I RL E GG
Sbjct: 179 NLFTESGSEGAAHLVASPDVDVISFTGSTAT--------GRAIMAAAAPTLKRLGLELGG 230
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K + A++++ + R+ + GQ C A SR+ V S+
Sbjct: 231 KTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA 274
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 72.6 bits (178), Expect = 9e-14
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G AA++P+NF A PAL G +++ KP+ S + ++ I AG+P GV N
Sbjct: 148 GVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFN 207
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G +T++P + ++FTGS +L Q K+I ++ E GG
Sbjct: 208 VVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIK------KVSLELGGNAP 261
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+++ V G + S F GQ C +R+YV + ++
Sbjct: 262 FIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY 302
|
Length = 482 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 1e-13
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V ++P+N+ + PAL G + + KPS+ A ++ + I E G+PPGV+N
Sbjct: 153 GVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLN 212
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V G G + + P + I FTGS T ++ + + P + E GGK+
Sbjct: 213 VVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMTAAAQMVK-----PVSL-ELGGKSP 266
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ +++ V + F GQ CSA SR+ V E +
Sbjct: 267 IIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERI 306
|
Length = 503 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 1e-13
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 12/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + PAL G++++ KP++ LS K+ EAG+P GV+N
Sbjct: 143 GVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLN 202
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI---NVYKNFPRLIGECGG 314
V GP G I + + + FTGS +VGK I N + E GG
Sbjct: 203 IVTGFGPTAGAAIASHMDVDKVAFTGST--------EVGKIIMQLAAKSNLKPVTLELGG 254
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K+ + A+V+ V + F GQ C A SR +V ES++
Sbjct: 255 KSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY 298
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 2e-13
Identities = 49/165 (29%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA+++P+N+ + PAL G++V+ KPS+ L+ + ++ + +PPGV+N
Sbjct: 140 GVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLN 198
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V G GD + P + ++ TGS+ T GK++ + R E GGK
Sbjct: 199 VVTGRGATVGDALVGHPKVRMVSLTGSIAT--------GKHVLSAAADSVKRTHLELGGK 250
Query: 316 NFHFIHASANVESVVNGTIRSAFEYC--GQKCSACSRMYVPESLF 358
+ A++++VV G IR F Y GQ C+A R+Y ++
Sbjct: 251 APVIVFDDADLDAVVEG-IR-TFGYYNAGQDCTAACRIYAQRGIY 293
|
Length = 475 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V +SP+N+ T +G + PAL G++V+ KPS+ L + + AG P G
Sbjct: 121 GVVGVISPWNYPLLTPMGDII---PALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQG 177
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGEC 312
V+ V DG I A + FTGSV T G+ + + ++ E
Sbjct: 178 VLQVVTGDGATGAALIDAGVDK--VAFTGSVAT--------GRKVMAAAAERLIPVVLEL 227
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GGK+ + A A++E + A GQ C + R+YV ES++
Sbjct: 228 GGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY 273
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 4e-13
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 8/161 (4%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA+++P+N+ + PAL G+ V+ KPS+ L+ + ++ + P GVVN
Sbjct: 139 GVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVN 197
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD +T + ++ TGS+ T + +I R E GGK
Sbjct: 198 ILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAPSIK------RTHMELGGKAP 251
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A++++VV G F GQ C+A R+Y ++
Sbjct: 252 VIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY 292
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 199 GFVAAVSPFNFT--AIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G + P+NF I +A PAL+ G++++ KPS+ + KI+ E G+P GV
Sbjct: 73 GVTTGILPWNFPFFLIARKMA--PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGV 130
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
N V G G + +P +A ++ TGSV ++ KNI ++ E GGK
Sbjct: 131 FNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNIT------KVCLELGGK 184
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+++ V + S GQ C+ R+YV + ++
Sbjct: 185 APAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIY 227
|
Length = 409 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 5e-13
Identities = 23/33 (69%), Positives = 27/33 (81%)
Query: 146 LDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
L++AAGN+YINDK TG+VVGQQPFGG R S
Sbjct: 463 DKVLRFAAGNFYINDKPTGAVVGQQPFGGARAS 495
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 5e-13
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLA---YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V+A++PFNF NL PA+ G + KP+ LS + +++ E G+P G
Sbjct: 125 GPVSAITPFNFPL---NLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKG 181
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
+ +P D + + ++FTGS L + GK +++ E GG
Sbjct: 182 AFSVLPCSRDD-ADLLVTDERIKLLSFTGSPAVGWDLKARAGKK--------KVVLELGG 232
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A+++ I AF GQ C + R+ V S++
Sbjct: 233 NAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY 276
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 1e-12
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPA---LMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V P+N+ + LA+ A G++V+ KP+ L+ ++ ++AG P GV
Sbjct: 149 GVCGIVIPWNYPLM--MLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGV 206
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN---VYKNFPRLIGEC 312
+N +P G + G ++ P + + FTGS P +GK+I N ++ E
Sbjct: 207 INILPGSGSLVGQRLSDHPDVRKLGFTGSTP--------IGKHIMKSCAVSNLKKVSLEL 258
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GGK+ I A +++ V + S F G+ C A R++V ES+
Sbjct: 259 GGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESI 303
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 68.2 bits (167), Expect = 2e-12
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 14/164 (8%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + PAL G++V+ KPS T LS + KI I+ +P GVVN
Sbjct: 138 GVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKI-IQDVLPKGVVN 196
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG---ECGG 314
V G G+ + P L + FTGS +VG+++ + +LI E GG
Sbjct: 197 IVTGKGSKSGEYLLNHPGLDKLAFTGST--------EVGRDVAIAAA-KKLIPATLELGG 247
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K+ + I AN + + G GQ C A SR++V E ++
Sbjct: 248 KSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY 291
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 66.8 bits (163), Expect = 7e-12
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 12/164 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + + PAL G +++ KP++ LS + AGVP GV+N
Sbjct: 160 GVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVIN 219
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI---NVYKNFPRLIGECGG 314
V GP G I + + ++FTGS +VG+ I N ++ E GG
Sbjct: 220 VVTGFGPTAGAAIASHMDVDKVSFTGST--------EVGRKIMQAAATSNLKQVSLELGG 271
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K+ I A+V+ V+ + F G+ C A SR+YV E ++
Sbjct: 272 KSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY 315
|
Length = 501 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 64.6 bits (157), Expect = 3e-11
Identities = 42/161 (26%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVV 256
G V + FNF L AL MG+ V+ KP + + +++ AG +PP V
Sbjct: 102 GPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDV 161
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKN 316
+ DG + P + FTGS +V + + + R+ E G N
Sbjct: 162 TLINGDGKT-MQALLLHPNPKMVLFTGSS--------RVAEKLALDAKQARIYLELAGFN 212
Query: 317 FHFIHASAN-VESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ + A V+ V ++ GQKC+A S ++VPE+
Sbjct: 213 WKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPEN 253
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 3e-11
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 6/161 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++++ K ++ LS K++ EAG+PPGV+N
Sbjct: 197 GVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLN 256
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V GP G + + + + FTGS T ++ L++ N + E GGK+
Sbjct: 257 VVSGFGPTAGAALASHMDVDKLAFTGSTDT-GKIVLELAAK----SNLKPVTLELGGKSP 311
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A+V+ V + F GQ C A SR +V E ++
Sbjct: 312 FIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
|
Length = 538 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 7e-11
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYT---PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V A+ PFN+ NLA + PAL+ G++V+ KP ++ + AG P G
Sbjct: 160 GVVLAIPPFNYPV---NLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKG 216
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
+++ V G GD +T P + I+FTG G I+ L E GG
Sbjct: 217 LISCVTGKGSEIGDFLTMHPGVNCISFTGG---------DTGIAISKKAGMVPLQMELGG 267
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
K+ + A+++ I+ F Y GQ+C+A + V ES+
Sbjct: 268 KDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESV 310
|
Length = 496 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 61.2 bits (149), Expect = 4e-10
Identities = 49/169 (28%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + PAL G++V+ KP+ LS + ++ I +P GVVN
Sbjct: 138 GVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMEL-IGDLLPKGVVN 196
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGK 315
V G G + + P +A + FTGS VG+ I Y +N + E GGK
Sbjct: 197 VVTGFGSEAGKPLASHPRIAKLAFTGST--------TVGRLIMQYAAENLIPVTLELGGK 248
Query: 316 NFHFIHASANVES------VVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A G + AF G+ C+ SR V ES++
Sbjct: 249 SPNIFFDDAMDADDDFDDKAEEGQLGFAFNQ-GEVCTCPSRALVQESIY 296
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 4e-10
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A ++PFNF A+ + A+ G++ + KPS+ + + ++ EAG P GV+N
Sbjct: 138 GVCAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLN 197
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
V D D + P + ++F GS P +G+ I + R+ G K
Sbjct: 198 VVHGD-KEAVDRLLEHPDVKAVSFVGSTP--------IGRYIHTTGSAHGKRVQALGGAK 248
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
N + A+ ++ + + +A+ GQ+C A S
Sbjct: 249 NHMVVMPDADKDAAADALVGAAYGAAGQRCMAIS 282
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 199 GFVAAVSPFNFTAIGGNLA---YTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V A+S FN NL PA+ G V+ KP+ LS ++ EAG+P G
Sbjct: 126 GVVVAISAFNHPL---NLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP--RLIGEC 312
VP + V + + P +A +F GS VG + K P R E
Sbjct: 183 WCQAVPCENAV-AEKLVTDPRVAFFSFIGSAR--------VGWMLRS-KLAPGTRCALEH 232
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GG + SA++++++ ++ F + GQ C + R++VP +
Sbjct: 233 GGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEI 277
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 55.3 bits (133), Expect = 3e-08
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 150 KYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
++ GN YIN K TG++VG QPFGG ++S
Sbjct: 447 EFHVGNLYINRKITGALVGVQPFGGFKLS 475
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 4e-08
Identities = 46/164 (28%), Positives = 76/164 (46%), Gaps = 16/164 (9%)
Query: 199 GFVAAVSPFNFT-AIGGNLAYT-PALM-GSSVLWKPS-DTALLSNYTIYKIMIEAGVPPG 254
G V A++P+NF I NLA PAL G++V+ KP+ DT + I PPG
Sbjct: 143 GVVGAITPWNFPHQI--NLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDFPPG 200
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGEC 312
VVN V + G + P + ++FTGS T G+ + + ++ E
Sbjct: 201 VVNIVTSSDHRLGALLAKDPRVDMVSFTGSTAT--------GRAVMADAAATLKKVFLEL 252
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GGK+ + A++ + + + + GQ C+ +R+ VP +
Sbjct: 253 GGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRA 296
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 7e-08
Identities = 48/167 (28%), Positives = 74/167 (44%), Gaps = 15/167 (8%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G V + P+NF + PAL G+ V+ KP++ S + ++ I +PPGVVN
Sbjct: 138 GVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMEL-IGDLLPPGVVN 196
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK-- 315
V G G + +S +A + FTG T RL +Q +N + E GGK
Sbjct: 197 VVNGFGLEAGKPLASSKRIAKVAFTGETTT-GRLIMQYAS-----ENIIPVTLELGGKSP 250
Query: 316 NFHF----IHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N F A + + G + A G+ C+ SR + ES++
Sbjct: 251 NIFFADVMDADDAFFDKALEGFVMFALNQ-GEVCTCPSRALIQESIY 296
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 52.8 bits (126), Expect = 2e-07
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 14/155 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A + PFNF A+ + A+ G++ + KPS+ ++ + ++ +EAG+P GV+N
Sbjct: 251 GVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLN 310
Query: 258 FVPADGPVFGDTITA---SPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
V DT+ A + ++F GS ++ + R+ G
Sbjct: 311 IVHGTN----DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKGK------RIQSNMGA 360
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
KN + AN+++ +N + + F GQ+C A S
Sbjct: 361 KNHGLVLPDANIDATLNALLAAGFGAAGQRCMALS 395
|
Length = 604 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 2e-07
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSN--YT--IYKIMIEAG 250
G V A+ +N+ +G AL G++++ K S+ S+ + I + + G
Sbjct: 122 GVVGAIVSWNYPFHNLLG---PIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACG 178
Query: 251 VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRL 308
P +V V + +T+ P + I F GS P VGK + ++ +
Sbjct: 179 HDPDLVQLVTCLPET-AEALTSHPVIDHITFIGSPP--------VGKKVMAAAAESLTPV 229
Query: 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ E GGK+ + A+++ + + +R F+ GQ C R+ V E
Sbjct: 230 VLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEK 277
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 9e-07
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 8/160 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + A+ P+NF P L+ G+ L K + + I ++ +AG+P GV
Sbjct: 128 GTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYG 187
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
++ AD I +A + TGSV + Q G + + + E GG +
Sbjct: 188 WLNADNDGVSQMIN-DSRIAAVTVTGSVRAGAAIGAQAGAALK------KCVLELGGSDP 240
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ A++E V + ++ GQ C+A R + E +
Sbjct: 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGI 280
|
Length = 462 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 49.8 bits (120), Expect = 1e-06
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 30/171 (17%)
Query: 199 GFVAAVSPFNFT-------AIGGNLAYTPALM-GSSVLWKPSD----TALLSNYTIYKIM 246
G V + P+NF A P LM G++VL K + AL I ++
Sbjct: 98 GVVLGIMPWNFPFWQVFRFAA-------PNLMAGNTVLLKHASNVPGCALA----IEELF 146
Query: 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306
EAG P GV + D + I A P + G+ TGS + + GKN+ K
Sbjct: 147 REAGFPEGVFQNLLIDSDQV-EAIIADPRVRGVTLTGSERAGRAVAAEAGKNL---K--- 199
Query: 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ + E GG + + A+++ V ++ + GQ C A R V E +
Sbjct: 200 KSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDV 250
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 3e-06
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 12/165 (7%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEA----GVPP 253
G V ++ FNF A+ G A + G+ V+WK + T L + K++ E +P
Sbjct: 156 GIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPG 215
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG 313
+ G G+ I + ++FTGS +++ L V + +N F + + E
Sbjct: 216 AIFTSF-CGGAEIGEAIAKDTRIPLVSFTGS----SKVGLMVQQTVN--ARFGKCLLELS 268
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
G N + A+++ V + +A GQ+C+ C R+ + ES++
Sbjct: 269 GNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY 313
|
Length = 508 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 47.6 bits (114), Expect = 8e-06
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMS 178
GN Y N K TG++VG+QPFGG +MS
Sbjct: 462 VGNLYANRKITGALVGRQPFGGFKMS 487
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 6e-05
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMS 178
GN Y N TG++VG PFGG MS
Sbjct: 464 VGNLYFNRGCTGAIVGYHPFGGFNMS 489
|
Length = 514 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 44.1 bits (105), Expect = 9e-05
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMSA 179
AGN YIN TG++VG+QPFGG +S
Sbjct: 458 AGNLYINRNITGAIVGRQPFGGWGLSG 484
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 1e-04
Identities = 40/159 (25%), Positives = 67/159 (42%), Gaps = 12/159 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G VA ++PFNF L AL MG+ L K + +++ G+P V+
Sbjct: 144 GPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVD 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ +DGP + + FTGS RL L++ + + E G ++
Sbjct: 204 LIHSDGPTMNKILLEANPRM-TLFTGSSKVAERLALELHGKVKL---------EDAGFDW 253
Query: 318 HFIHAS-ANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355
+ ++V+ V + A+ GQKCSA S ++ E
Sbjct: 254 KILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHE 292
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 38/165 (23%), Positives = 64/165 (38%), Gaps = 20/165 (12%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL----MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G V + +N+ NL P G++V+ KPS+ + ++ + K ++ + P
Sbjct: 111 GVVLVIGAWNYPL---NLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAK-LLTKYLDPS 166
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN--VYKNFPRLIGEC 312
V + V + P+ I FTGS +VGK + +N E
Sbjct: 167 YVRVIEGGVEV-TTELLKEPF-DHIFFTGSP--------RVGKLVMQAAAENLTPCTLEL 216
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GGK+ + S N++ F GQ C A + V S+
Sbjct: 217 GGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSI 261
|
Length = 493 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 42.2 bits (99), Expect = 4e-04
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 150 KYAAGNYYINDKSTGSVVGQQPFGGGRMS 178
++ GN Y N TG++VG QPFGG +MS
Sbjct: 458 EFEVGNLYFNRNITGAIVGYQPFGGFKMS 486
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 41.7 bits (99), Expect = 7e-04
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 40/86 (46%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDG------------- 199
GN Y+N G+VVG QPFGG +GL G
Sbjct: 977 VGNVYVNRNQIGAVVGVQPFGG--------------------QGLSGTGPKAGGPHYLLR 1016
Query: 200 FVA--AVSPFNFTAIGGNLAYTPALM 223
F V+ N TA GGN +L+
Sbjct: 1017 FATEKTVT-VNTTAAGGN----ASLL 1037
|
Length = 1038 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.001
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 153 AGNYYINDKSTGSVVGQQPFGG 174
AGN Y+N G+VVG QPFGG
Sbjct: 529 AGNLYVNRNIVGAVVGVQPFGG 550
|
Length = 769 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.001
Identities = 45/160 (28%), Positives = 69/160 (43%), Gaps = 16/160 (10%)
Query: 207 FNFTAIGGNLAYTPALM-GSSVLWKP-SDTALLSNYTIYKIMIEAGV-PPGVVNFVPADG 263
FNF A G PAL+ G V+ KP + TA L+ + K ++ AG+ P G ++ V
Sbjct: 158 FNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMV-KDVVAAGILPAGALSVVCGSS 216
Query: 264 PVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHA- 322
D + ++ FTGS T L + V + R+ E N +
Sbjct: 217 AGLLDHLQPFDVVS---FTGSAETAAVLRS----HPAVVQRSVRVNVEADSLNSALLGPD 269
Query: 323 ----SANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
S + V +R GQKC+A R++VPE+L+
Sbjct: 270 AAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY 309
|
Length = 521 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 39.8 bits (94), Expect = 0.003
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 153 AGNYYINDKSTGSVVGQQPFGG 174
AGN Y+N G+VVG QPFGG
Sbjct: 969 AGNIYVNRNIIGAVVGVQPFGG 990
|
Length = 1208 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 153 AGNYYINDKSTGSVVGQQPFGG 174
GN Y+N G+VVG QPFGG
Sbjct: 1066 VGNLYVNRNMVGAVVGVQPFGG 1087
|
Length = 1318 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.003
Identities = 48/170 (28%), Positives = 73/170 (42%), Gaps = 30/170 (17%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTP---ALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G +SP+N+ NLA+ P A+ G++ + KPS+ ++ I KI+ EA
Sbjct: 102 GVCLIISPWNYPF---NLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA----- 153
Query: 255 VVNFVPADGPVF-GDTITASPYLA----GINFTGSVPTFNRLWLQVGKNI--NVYKNFPR 307
F + VF GD A L I FTGS P VGK + K+
Sbjct: 154 ---FDEDEVAVFEGDAEVAQALLELPFDHIFFTGS-PA-------VGKIVMAAAAKHLAS 202
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ E GGK+ + +A+++ F GQ C A ++V ES+
Sbjct: 203 VTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESV 252
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 428 | |||
| KOG2455|consensus | 561 | 100.0 | ||
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| KOG2451|consensus | 503 | 100.0 | ||
| KOG2450|consensus | 501 | 100.0 | ||
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| KOG2456|consensus | 477 | 100.0 | ||
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| KOG2452|consensus | 881 | 100.0 | ||
| KOG2454|consensus | 583 | 100.0 | ||
| KOG2453|consensus | 507 | 100.0 | ||
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 99.97 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 99.84 | |
| KOG4165|consensus | 433 | 99.72 | ||
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.44 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.55 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 95.6 | |
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 95.31 | |
| KOG2455|consensus | 561 | 81.89 |
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-66 Score=507.01 Aligned_cols=334 Identities=49% Similarity=0.756 Sum_probs=306.8
Q ss_pred ccccCCCccCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEE
Q psy1960 23 LLILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAK 102 (428)
Q Consensus 23 ~~~~~~~~~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~ 102 (428)
+.+-....+.|||...|.++|++|..+++|++..+.++.++|++|||+++.+.+.++ +++|++|+.++++
T Consensus 20 ~~~~~~~~i~neP~~~~~~~s~er~~l~~A~~~~~~~~~evP~vIg~~~v~t~~~q~----------q~~P~~hq~~lA~ 89 (561)
T KOG2455|consen 20 DEDKQPKKIANEPVLEYRKISKERVDLEKALKELQKRPLEVPLVIGDKEVYTNDEQY----------QVCPHNHQHVLAK 89 (561)
T ss_pred ccccCCccccCCCccccCCCCHHHHHHHHHHHHHhcCceeccEEECCeeeecCCccc----------ccCCchhhhhhhh
Confidence 344556679999999999999999999999999998899999999999999988776 8999999999999
Q ss_pred EeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc---
Q psy1960 103 FYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM--- 177 (428)
Q Consensus 103 v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~--- 177 (428)
+.+|+.++ ++||++|. |++.|..+|..+|. +|++|+ |++ ++..+++....+-.+.+||.+.++..
T Consensus 90 ~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~-------aI~lkA-Adl--istkyr~~l~aatMlgqgKt~~qAeiDa~ 159 (561)
T KOG2455|consen 90 VYYATKKQIEKAIKAALSAQKTWELVPIADRL-------AIFLKA-ADL--ISTKYRYDLLAATMLGQGKTAIQAEIDAA 159 (561)
T ss_pred eeeccHHHHHHHHHHHHhhcCccccCcHHHHH-------HHHHHH-HHH--hcchHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 99999999 99999999 99999999999999 999999 999 99777633333344567777765544
Q ss_pred ----hhhhhhhc--------------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcCCCEEEEeCCccchHHH
Q psy1960 178 ----SALTFYLE--------------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSN 239 (428)
Q Consensus 178 ----~~l~~~~~--------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKPs~~apl~a 239 (428)
+++|+.+. .+..|++.||+..|+|++|+||||.++.+++..+||||||+|+||||..+.+++
T Consensus 160 ~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLMGN~VLwkPS~ta~lss 239 (561)
T KOG2455|consen 160 AELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAALSS 239 (561)
T ss_pred HHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeeccccccChhhhcceeeecccchhHHHH
Confidence 34554432 245788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeE
Q psy1960 240 YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHF 319 (428)
Q Consensus 240 ~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~i 319 (428)
+++.++|+|||+|+|++|+||+|+..+++.++++|++.++.||||+.+.+++|++.++++..|++|||+++|+||||.++
T Consensus 240 Yii~~il~EAGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHf 319 (561)
T KOG2455|consen 240 YIIYRILREAGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHF 319 (561)
T ss_pred HHHHHHHHHcCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcce
Q psy1960 320 IHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPV 376 (428)
Q Consensus 320 V~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~ 376 (428)
||++||++.++..+++++|.++||+|+|+||+||++|+|+++.++|.+...++.+.-
T Consensus 320 VH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q~~igd 376 (561)
T KOG2455|consen 320 VHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQLKIGD 376 (561)
T ss_pred eccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhhcccCC
Confidence 999999999999999999999999999999999999999999999999999877654
|
|
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-61 Score=507.48 Aligned_cols=322 Identities=46% Similarity=0.747 Sum_probs=289.6
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
+.|+|.++|.+.+++|+.+.++|+.+++.+..++++|||+|+.+..+.. ++||+++++++++++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~----------v~~P~~tg~~l~~~~~~~~~~ 70 (522)
T cd07123 1 PVNEPVLSYAPGSPERAKLQEALAELKSLTVEIPLVIGGKEVRTGNTGK----------QVMPHDHAHVLATYHYADAAL 70 (522)
T ss_pred CCCCcceeccCChhHHHHHHHHHHHHhhhccccCeeECCEEcCCCCeEE----------EECCCCCCCEEEEEeCCCHHH
Confidence 3689999999988899999999999876666789999999998755444 789996589999999999999
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhh-ccchhHHHHHHHhcCCCCCcccc-------hhh
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAG-NYYINDKSTGSVVGQQPFGGGRM-------SAL 180 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~-~~~~~~~~~~~l~~gkp~~~~~~-------~~l 180 (428)
++|+++|+ |++.|+++|..+|. ++|+++ +++ |++ +++ ....+...+.|||+.++.. +.+
T Consensus 71 v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~~-ela~~~~~e~Gk~~~~a~~~~v~~~~~~~ 139 (522)
T cd07123 71 VEKAIEAALEARKEWARMPFEDRA-------AIFLKA-ADL--LSGKYRY-ELNAATMLGQGKNVWQAEIDAACELIDFL 139 (522)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhhCHH-HHHHHHHHhcCCCHHHHhHHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 986 566 5666777899999765532 234
Q ss_pred hhhhcc-----------c--cccceeeeccc-ceEEEECCCchhhhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHH
Q psy1960 181 TFYLEV-----------L--ASNLGRGEGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 181 ~~~~~~-----------~--~~~~~~~~~p~-GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll 246 (428)
+|++.. . ....+.++.|+ |||++|+|||||+....++++|||+||+||+|||+.+|+++..+++++
T Consensus 140 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l 219 (522)
T cd07123 140 RFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKIL 219 (522)
T ss_pred HHHHHHHHHhcCccccCCCCCceeEEEEecCCceEEEECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHH
Confidence 454421 0 12235667787 999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.++|+|+|++|+++|++.++++.|+.||++++|+||||+++|+.|++++++++++++..||+++|+|||||+||++|||+
T Consensus 220 ~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl 299 (522)
T cd07123 220 EEAGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADV 299 (522)
T ss_pred HHcCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCH
Confidence 99999999999999988889999999999999999999999999999999999988888999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 300 ~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (522)
T cd07123 300 DSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIK 346 (522)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999999999865
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-60 Score=505.25 Aligned_cols=322 Identities=40% Similarity=0.604 Sum_probs=289.6
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-
Q psy1960 32 QETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL- 110 (428)
Q Consensus 32 ~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~- 110 (428)
+|+|..+|.|.+.+++.+.++++++.+....++++|||+|+.+.+.. ++ ++||.|+++++++++.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~-~~--------~~nP~t~g~~i~~~~~~~~~~v 71 (533)
T TIGR01236 1 ANEPVLDFRPGSPERDLLRAELKELKSHPIEIPLVIGGEEVMGSGER-ID--------QVQPHNHQAVLAKATNATEEDA 71 (533)
T ss_pred CCCcccccCCCchHHHHHHHHHHHHhhcCeeeceeECCEEecCCCCE-EE--------EECCCCCCeEEEEEeCCCHHHH
Confidence 47899999998778999999999998888889999999999753322 22 789997679999999999999
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHh-hccchhHHHHHHHhcCCCCCcccch-------hhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAA-GNYYINDKSTGSVVGQQPFGGGRMS-------ALT 181 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~-~~~~~~~~~~~~l~~gkp~~~~~~~-------~l~ 181 (428)
++|+++|+ +++.|+.+|..+|. ++|+++ +++ |+ ++++ ....+...++||++.+++.+ .++
T Consensus 72 ~~av~~A~~a~~~W~~~~~~~R~-------~~L~k~-a~~--l~~~~~~-~la~~~~~e~GK~~~~a~~e~v~~~i~~~~ 140 (533)
T TIGR01236 72 AKAVEAALDAKKDWSALPFYDRA-------AIFLKA-ADL--LSGPYRE-EILAATMLGQSKNVYQAEIDAVAELIDFFR 140 (533)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHhhcHH-HHHHHHHHHcCCcHHHHhHhHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 98 4776 66677888999998766542 445
Q ss_pred hhhcc-------------ccccceeeeccc-ceEEEECCCchhhhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHHH
Q psy1960 182 FYLEV-------------LASNLGRGEGLD-GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 182 ~~~~~-------------~~~~~~~~~~p~-GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
|++.. .....+..+.|+ |||++|+|||||+....+++++||+||+||+|||+.+|+++..+++++.
T Consensus 141 ~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaGN~VVlKPs~~tp~~~~~l~~~~~ 220 (533)
T TIGR01236 141 FNVKYARELYEQQPSESAPGEWNRTDYRPLEGFVYAISPFNFTAIAGNLPGAPALMGNTVIWKPSITATLSNYLTMRILE 220 (533)
T ss_pred HHHHHHHHhcCccccCCCCCceeEEEEecCCCEEEEEeCCchHHHHHHHHHHHHHhCCeEEEECCCcCCHHHHHHHHHHH
Confidence 54421 111234556677 9999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|++.++++.|+.||++++|+||||+++|+.|++.+++++++++..|++++|+|||||+||++|||+|
T Consensus 221 ~aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~ 300 (533)
T TIGR01236 221 EAGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADID 300 (533)
T ss_pred hcCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHH
Confidence 99999999999999888899999999999999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 301 ~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 346 (533)
T TIGR01236 301 HAVTATIRGAFEYQGQKCSAASRLYVPHSVWPRFKDELLAELAEVK 346 (533)
T ss_pred HHHHHHHHHHHhhCCCCCcCCeeEEEchhHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999865
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-61 Score=468.56 Aligned_cols=284 Identities=25% Similarity=0.306 Sum_probs=266.4
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
.-+|||+|+++.+..+++ +.||.+ +++|+.++..+.++ ++|+++|. +|++|++++..+|. ++
T Consensus 25 ~~~igGkWv~s~~~~tF~--------V~nPa~-geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs-------~l 88 (503)
T KOG2451|consen 25 QSYIGGKWVDSPDNKTFE--------VDNPAN-GEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERS-------AL 88 (503)
T ss_pred hccccceeeccCCCCeee--------ccCCCc-cchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HH
Confidence 479999999987776666 889999 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~ 202 (428)
|+|+ .++ |.+|++ .+..+.++|.|||+.++..+ .++||++. .....++.++|+||++
T Consensus 89 Lrkw-y~L--i~en~d-dLa~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~a 164 (503)
T KOG2451|consen 89 LRKW-YEL--IMENKD-DLATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVA 164 (503)
T ss_pred HHHH-HHH--HHhchH-HHHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEE
Confidence 9999 999 999998 88888999999999998874 67788752 1233567889999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCC---ChhhhhhhhcCCCeeE
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD---GPVFGDTITASPYLAG 278 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~---g~~~g~~L~~~~~v~~ 278 (428)
+|+|||||..+...+..+||+ ||+||+|||++||++++.++++-++||+|+|++|+|+++ ..++|+.|+.+|+|++
T Consensus 165 lItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~Vrk 244 (503)
T KOG2451|consen 165 LITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRK 244 (503)
T ss_pred EecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceee
Confidence 999999999999999999999 999999999999999999999999999999999999974 5689999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+.+|+.++++++..+| ++.+||||+.|.||++|||+|+|+++.+.++|.++||.|.+.+|+|||++||
T Consensus 245 isFTGST~VGKiL~~qsastvK------kvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy 318 (503)
T KOG2451|consen 245 ISFTGSTNVGKILMAQSASTVK------KVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY 318 (503)
T ss_pred EEeeccchHHHHHHHhhhhhhh------heehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH
Confidence 9999999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|.+++++++
T Consensus 319 D~Fv~~l~e~vkkl~ 333 (503)
T KOG2451|consen 319 DKFVSKLAEAVKKLK 333 (503)
T ss_pred HHHHHHHHHHHHhee
Confidence 999999999999976
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-60 Score=482.56 Aligned_cols=286 Identities=22% Similarity=0.282 Sum_probs=264.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
..+||||+|+++.+..+++ ++||.+ ++++++|+.++.+| |.||++|+ ||+ .|++++..+|.
T Consensus 21 ~~lfin~e~~~~~s~kt~~--------~~nP~t-g~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~------ 85 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFP--------VVNPAT-GEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERG------ 85 (501)
T ss_pred hheeecCeeecccCCceee--------eecCCC-CCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHH------
Confidence 3699999999987766655 889998 89999999999999 99999999 999 79999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhccc------------cccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEVL------------ASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~~------------~~~~~~~~~p~G 199 (428)
++|+++ +++ ++++.+ ..+..+.++.|||+.+++ . +.+|||++.. +.-.++.+.|+|
T Consensus 86 -~~L~~~-Adl--ie~~~~-~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~G 160 (501)
T KOG2450|consen 86 -RLLRKL-ADL--IEQDAD-VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIG 160 (501)
T ss_pred -HHHHHH-HHH--HHhhhH-HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCcce
Confidence 999999 999 999988 777888999999998887 3 3677776521 224578899999
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
|++.|+|||||+.+..|+++|||+ ||+||+||++++|++++.+++++.++|+|+||+|+|+|.|.++|.+|..||+|++
T Consensus 161 V~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~k 240 (501)
T KOG2450|consen 161 VCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDK 240 (501)
T ss_pred eeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCce
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcc-cCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGKN-INVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~-~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+.+|+.|.+++++. ++ |+++|+|||+|.||++|||+|.|++.++.+.|.|+||.|++.+|+|||++|
T Consensus 241 iaFTGSt~~G~~I~~aaa~~n~K------~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~i 314 (501)
T KOG2450|consen 241 VAFTGSTPVGKEIMEAAAESNLK------PVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESI 314 (501)
T ss_pred EEecCCCcchhHHhhhhhhcCCc------eeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechH
Confidence 99999999999999999864 55 999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhc-CCc
Q psy1960 358 FCFCSCFLLLFLFS-ASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~-l~v 374 (428)
||+|++++++..++ +.|
T Consensus 315 ydefv~~~v~~a~~~~kv 332 (501)
T KOG2450|consen 315 YDEFVEKFVAAAKKKLKV 332 (501)
T ss_pred HHHHHHHHHHHHhccccc
Confidence 99999999999966 554
|
|
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-59 Score=494.41 Aligned_cols=324 Identities=24% Similarity=0.303 Sum_probs=289.3
Q ss_pred CccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCC
Q psy1960 29 YNVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYAT 107 (428)
Q Consensus 29 ~~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~ 107 (428)
.++.|||.++|.+ +++|+++.++|+.+... ...++++|||+|+.+..... ++||+++++++++++.++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----------~~~P~~t~~~i~~~~~a~ 71 (514)
T PRK03137 3 VPYKHEPFTDFSV-EENVEAFEEALKKVEKELGQDYPLIIGGERITTEDKIV----------SINPANKSEVVGRVSKAT 71 (514)
T ss_pred CCCCCccccccCc-hHhHHHHHHHHHHHHhhcccccceeECCEEecCCCeeE----------eECCCCCCceEEEEeCCC
Confidence 5789999999997 88999999999997644 56789999999998755444 789995489999999999
Q ss_pred HhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------h
Q psy1960 108 PVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------A 179 (428)
Q Consensus 108 ~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~ 179 (428)
.++ ++|+++|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...++|||+.+++.+ .
T Consensus 72 ~~~v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~ 140 (514)
T PRK03137 72 KELAEKAMQAALEAFETWKKWSPEDRA-------RILLRA-AAI--IRRRKH-EFSAWLVKEAGKPWAEADADTAEAIDF 140 (514)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 999 99999999 99999999999999 999999 999 999987 77778889999998876542 3
Q ss_pred hhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 180 LTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 180 l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
+++++.. .+...+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.++
T Consensus 141 ~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~ 220 (514)
T PRK03137 141 LEYYARQMLKLADGKPVESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEV 220 (514)
T ss_pred HHHHHHHHHHhcCCccccCCCCceEEEEEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHH
Confidence 4444321 1123456778899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
+.++|+|+|++|+++|++.++++.|+.||++++|+||||+++|+.|++.+++....+.+++|+++|+|||||+||++|||
T Consensus 221 l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daD 300 (514)
T PRK03137 221 LEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDAD 300 (514)
T ss_pred HHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCC
Confidence 99999999999999998888999999999999999999999999999998874333444559999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 301 l~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~l~~ 349 (514)
T PRK03137 301 LDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTV 349 (514)
T ss_pred HHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999998764
|
|
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-59 Score=492.37 Aligned_cols=321 Identities=28% Similarity=0.353 Sum_probs=288.1
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHh
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPV 109 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~ 109 (428)
|.|+|..+|.++ .+|.++..++.+++++ ...++.+|||+|+.+.+... ++||+++++++++++.++.+
T Consensus 1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----------v~~P~t~~~~i~~~~~a~~~ 69 (512)
T cd07124 1 FRNEPFTDFADE-ENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIE----------SRNPADPSEVLGTVQKATKE 69 (512)
T ss_pred CCCCcccccCcH-HHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEE----------eECCCCCCceEEEEeCCCHH
Confidence 689999999987 8899999999999877 67789999999998655544 78999768999999999999
Q ss_pred H-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhh
Q psy1960 110 L-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALT 181 (428)
Q Consensus 110 ~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~ 181 (428)
+ ++|+++|+ |++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++|||..+++.+ .++
T Consensus 70 ~v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~ev~~~i~~~~ 138 (512)
T cd07124 70 EAEAAVQAARAAFPTWRRTPPEERA-------RLLLRA-AAL--LRRRRF-ELAAWMVLEVGKNWAEADADVAEAIDFLE 138 (512)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 9 99999999 99999999999999 999999 999 999988 77788899999998776542 344
Q ss_pred hhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHH
Q psy1960 182 FYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE 248 (428)
Q Consensus 182 ~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~e 248 (428)
|++.. .+.....++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~ 218 (512)
T cd07124 139 YYAREMLRLRGFPVEMVPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE 218 (512)
T ss_pred HHHHHHHHhcCccccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH
Confidence 44321 1123466778899999999999999999999999998 9999999999999999999999999
Q ss_pred cCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHH
Q psy1960 249 AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVES 328 (428)
Q Consensus 249 AGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~ 328 (428)
+|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.+++..+.+.+++|+++|+|||||+||++|||+|.
T Consensus 219 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~ 298 (512)
T cd07124 219 AGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDE 298 (512)
T ss_pred hCcCCCceEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHH
Confidence 99999999999998888999999999999999999999999999998873222233449999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 329 VVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 329 Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 299 Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~ 343 (512)
T cd07124 299 AAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALK 343 (512)
T ss_pred HHHHHHHHHHhhCCCccccceEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999865
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-59 Score=488.52 Aligned_cols=300 Identities=24% Similarity=0.276 Sum_probs=270.5
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
.++|||+|++..+... ++||.+ ++++++++.++.++ ++|+++|+ +++.|++++..+|. ++
T Consensus 2 ~~~i~g~~~~~~~~~~----------~~nP~t-g~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~-------~i 63 (472)
T COG1012 2 KLLIDGEWVDGASTIE----------VINPAT-GEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERA-------AI 63 (472)
T ss_pred CccCCCeecCCCCcee----------eeCCCC-CCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------HH
Confidence 4789999999877333 789999 79999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhccc------------cccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEVL------------ASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~~------------~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+..+++|||+.+++. +.++|++... ....+.+++|+|||++
T Consensus 64 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 139 (472)
T COG1012 64 LRRI-ADL--LEARAE-ELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGA 139 (472)
T ss_pred HHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceEEEE
Confidence 9999 999 999998 7888889999999887665 3456665421 2456888999999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+.+..++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+||
T Consensus 140 I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FT 219 (472)
T COG1012 140 ITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFT 219 (472)
T ss_pred ECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999887899999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCS 362 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~ 362 (428)
||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+
T Consensus 220 GSt~~G~~i~~~Aa~~~k------~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~ 293 (472)
T COG1012 220 GSTAVGRAIAAAAAANLK------PVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFV 293 (472)
T ss_pred CChHHHHHHHHHHhhcCC------cEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHH
Confidence 999999999999998888 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCcceEEEeehhhhcc--cccccCCcccccchH
Q psy1960 363 CFLLLFLFSASVPVFCFCSCFLLLF--LFSTSVPVFCFCSCF 402 (428)
Q Consensus 363 ~~L~~~l~~l~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 402 (428)
++|.++ ++ ..-.|+ .-.|-|+|+.-..-.
T Consensus 294 ~~l~~~-~~----------~l~~Gd~~d~~t~~Gpli~~~~~ 324 (472)
T COG1012 294 ERLVAR-AA----------SLKVGDPLDPSTDLGPLISEEQL 324 (472)
T ss_pred HHHHHH-Hh----------cCCCCCCCCCCCccCCCCCHHHH
Confidence 999999 54 112454 256667777665544
|
|
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-58 Score=485.39 Aligned_cols=321 Identities=24% Similarity=0.303 Sum_probs=284.2
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHh
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPV 109 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~ 109 (428)
+.|||..+|.. ++++.++...+..+..+ +..++++|||+|+.+.+... ++||.++++++++++.++.+
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----------~~~P~~~~~~i~~~~~~~~~ 69 (511)
T TIGR01237 1 YGNAPFTDFAD-ADLVQAAFQALARVKEQLGKTYPLYINGEYVETENKID----------SINPCDPSEVVGKVGKASVE 69 (511)
T ss_pred CCCCCccccCc-HHHHHHHHHHHHHHHHhhccccceeECCEEecCCCeEE----------eECCCCCCcEEEEEeCCCHH
Confidence 57999999986 78899998888886543 67778999999998755443 78999658999999999999
Q ss_pred H-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhh
Q psy1960 110 L-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALT 181 (428)
Q Consensus 110 ~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~ 181 (428)
+ ++|+++|+ |++.|+++|.++|. ++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++
T Consensus 70 ~v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~ 138 (511)
T TIGR01237 70 QAEHALQIAKKAFEAWKKTPVRERA-------GILRKA-AAI--MERRRH-ELNALICLEVGKIIPEADAEVAEAIDFCE 138 (511)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9 99999999 99999999999999 999999 999 999888 7777888999999876553 2345
Q ss_pred hhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH
Q psy1960 182 FYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 182 ~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
+++.. .+.....++.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.
T Consensus 139 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ 218 (511)
T TIGR01237 139 YYAREMERLAGQGVNLDIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILI 218 (511)
T ss_pred HHHHHHHHhcCccccCCCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHH
Confidence 54321 1123456677899999999999999999999999998 999999999999999999999999
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|++.+++...++++++|+++|+|||||+||++|||+|
T Consensus 219 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~ 298 (511)
T TIGR01237 219 EAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIE 298 (511)
T ss_pred HhCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHH
Confidence 99999999999999888899999999999999999999999999999885433334455999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 299 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~ 344 (511)
T TIGR01237 299 QAVAGAVYSAFGFTGQKCSACSRVVVLSPVYDAVVERFVEATRSLN 344 (511)
T ss_pred HHHHHHHHHHHhcCCCCcccceEEEEehhHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999876
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-58 Score=482.68 Aligned_cols=319 Identities=20% Similarity=0.257 Sum_probs=286.3
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHh
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPV 109 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~ 109 (428)
.++|.|..||. ...||..+..++.++.....++|.||||+|+.++.... ++||.|+++++++++.++++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----------~~nP~t~~e~i~~~~~~~~~ 74 (500)
T TIGR01238 6 GRKNSLGIDLD-NESELKPLEAQIHAWADKTWQAAPIIGHSYKADGEAQP----------VTNPADRRDIVGQVFHANLA 74 (500)
T ss_pred CCCCCCCcCCC-CHHHHHHHHHHHHHHhcCceecCceECCEEecCCCeEE----------eeCCCCCCeEEEEEeCCCHH
Confidence 47899999997 56789999999999988888899999999987444433 78999855899999999999
Q ss_pred H-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhh
Q psy1960 110 L-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALT 181 (428)
Q Consensus 110 ~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~ 181 (428)
+ ++|+++|+ +++.|+++|..+|. ++|+++ +++ |+++.+ ....+...++|||..+++. +.++
T Consensus 75 dv~~av~~A~~a~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~i~~l~ 143 (500)
T TIGR01238 75 HVQAAIDSAQQAFPTWNATPAKERA-------AKLDRL-ADL--LELHMP-ELMALCVREAGKTIHNAIAEVREAVDFCR 143 (500)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 9 99999999 99999999999999 999999 999 999988 7777888999999876654 3456
Q ss_pred hhhccccc-cceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEe
Q psy1960 182 FYLEVLAS-NLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFV 259 (428)
Q Consensus 182 ~~~~~~~~-~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv 259 (428)
+++..... .....+.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|++
T Consensus 144 ~~a~~~~~~~~~~~~~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v 223 (500)
T TIGR01238 144 YYAKQVRDVLGEFSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLL 223 (500)
T ss_pred HHHHHHHHhcCceeccCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEE
Confidence 66543211 1123567899999999999999999999999998 999999999999999999999999999999999999
Q ss_pred eCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhh
Q psy1960 260 PADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFE 339 (428)
Q Consensus 260 ~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~ 339 (428)
+|++.++++.|+.||+++.|+||||+++|+.|.+.+++++.. .+|+++|+|||||+||++|||+|.|++.+++++|.
T Consensus 224 ~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~---~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~ 300 (500)
T TIGR01238 224 PGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDA---PVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFD 300 (500)
T ss_pred ecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhcccC---CceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHh
Confidence 998778899999999999999999999999999999987621 12899999999999999999999999999999999
Q ss_pred cCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 340 YCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 340 ~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 301 nsGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~ 334 (500)
T TIGR01238 301 SAGQRCSALRVLCVQEDVADRVLTMIQGAMQELK 334 (500)
T ss_pred cCCCCCCCCceeEEcHhhHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999865
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-58 Score=479.78 Aligned_cols=285 Identities=21% Similarity=0.303 Sum_probs=258.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ +|+.|+.+|.++|. +
T Consensus 11 ~~~~i~G~~~~~~~~~~~~--------v~nP~t-g~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~-------~ 74 (482)
T PRK11241 11 QQALINGEWLDANNGEVID--------VTNPAN-GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA-------N 74 (482)
T ss_pred ccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------H
Confidence 3589999998754333222 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ ++++.+ ....+...++|||+.+++. +.++|++.. .+...+.++.|+|||
T Consensus 75 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 150 (482)
T PRK11241 75 ILRRW-FNL--MMEHQD-DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVT 150 (482)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEE
Confidence 99999 999 999988 7777888999999876654 345555421 112235677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++++|+
T Consensus 151 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ 230 (482)
T PRK11241 151 AAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKLS 230 (482)
T ss_pred EEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+
T Consensus 231 FTGS~~~G~~i~~~aa~~l~------~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~ 304 (482)
T PRK11241 231 FTGSTEIGRQLMEQCAKDIK------KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 304 (482)
T ss_pred EECcHHHHHHHHHHHHhcCC------cEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHH
Confidence 99999999999999999988 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCC
Q psy1960 361 CSCFLLLFLFSAS 373 (428)
Q Consensus 361 f~~~L~~~l~~l~ 373 (428)
|+++|++++++++
T Consensus 305 f~~~l~~~~~~l~ 317 (482)
T PRK11241 305 FAEKLQQAVSKLH 317 (482)
T ss_pred HHHHHHHHHhhCC
Confidence 9999999999865
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-57 Score=483.74 Aligned_cols=286 Identities=17% Similarity=0.220 Sum_probs=258.7
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+..++++|||+|+.+.+...++ ++||++ ++++++++.++.+| ++|+++|+ ||+.|+.++.++|.
T Consensus 111 ~~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~----- 176 (604)
T PLN02419 111 PPRVPNLIGGSFVESQSSSFID--------VINPAT-QEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQ----- 176 (604)
T ss_pred ccccceeECCEEecCCCCceEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 4557899999999764432222 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++++ ....+...+.|||+.+++. +.++|++.. .....+.+++|+
T Consensus 177 --~iL~k~-a~~--L~~~~~-ela~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~ 250 (604)
T PLN02419 177 --RVMLKF-QEL--IRKNMD-KLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPL 250 (604)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCc
Confidence 999999 999 999988 7778888999999877654 245555421 112346678899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.+++|+.|++|+
T Consensus 251 GVV~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~-~~~~~L~~~~~Vd 329 (604)
T PLN02419 251 GVCAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN-DTVNAICDDEDIR 329 (604)
T ss_pred cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCCh-HHHHHHHhCCCCC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999975 6789999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++
T Consensus 330 ~V~FTGSt~vG~~I~~~Aa~~lk------~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~- 402 (604)
T PLN02419 330 AVSFVGSNTAGMHIYARAAAKGK------RIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD- 402 (604)
T ss_pred EEEEeCChHHHHHHHHHHhccCC------cEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-
Confidence 99999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 403 ~d~f~e~l~~~~~~l~ 418 (604)
T PLN02419 403 AKSWEDKLVERAKALK 418 (604)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999999865
|
|
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-57 Score=475.86 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=264.1
Q ss_pred HHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChh
Q psy1960 52 ALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVG 129 (428)
Q Consensus 52 al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~ 129 (428)
.|.++.++..+++++|||+|+.+..... ++||.+ ++++++++.++.++ ++|+++|+ ||+.|++++.+
T Consensus 10 ~~~~~~~~~~~~~~~I~G~~~~~~~~~~----------~~nP~t-~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~ 78 (508)
T PLN02315 10 FLSEIGLSSRNLGCYVGGEWRANGPLVS----------SVNPAN-NQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAP 78 (508)
T ss_pred HHHHHhcCccccCceECCEEecCCCeee----------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 3556677788899999999987644333 789998 79999999999999 99999999 99999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------cccc
Q psy1960 130 LLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASN 190 (428)
Q Consensus 130 ~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~ 190 (428)
+|. ++|+++ +++ |+++.+ ....+...+.|||+.+++.+ .++|++.. ....
T Consensus 79 ~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~ 147 (508)
T PLN02315 79 KRG-------EIVRQI-GDA--LRAKLD-YLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHM 147 (508)
T ss_pred HHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCce
Confidence 999 999999 999 999988 77778899999998776542 35555431 0112
Q ss_pred ceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHH----HHHHHHHcCCCCccEEEeeCCChh
Q psy1960 191 LGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYT----IYKIMIEAGVPPGVVNFVPADGPV 265 (428)
Q Consensus 191 ~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~----l~~ll~eAGlP~gvv~vv~g~g~~ 265 (428)
.+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++.. +.+++.++|+|+|++|+++| +.+
T Consensus 148 ~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g-~~~ 226 (508)
T PLN02315 148 MMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG-GAE 226 (508)
T ss_pred eEEEEecceEEEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC-ChH
Confidence 345678899999999999999999999999998 999999999999999987 67888999999999999998 778
Q ss_pred hhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCcc
Q psy1960 266 FGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKC 345 (428)
Q Consensus 266 ~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C 345 (428)
+++.|+.||++++|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|
T Consensus 227 ~~~~l~~~~~v~~v~fTGS~~~G~~v~~~aa~~~~------~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C 300 (508)
T PLN02315 227 IGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFG------KCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRC 300 (508)
T ss_pred HHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------CEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCC
Confidence 89999999999999999999999999999998877 899999999999999999999999999999999999999
Q ss_pred ccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 346 SACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 346 ~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++++|+|||+++||+|+++|+++++++++
T Consensus 301 ~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 329 (508)
T PLN02315 301 TTCRRLLLHESIYDDVLEQLLTVYKQVKI 329 (508)
T ss_pred CCCeEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998764
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-57 Score=474.06 Aligned_cols=300 Identities=24% Similarity=0.304 Sum_probs=268.5
Q ss_pred HHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCcccc
Q psy1960 49 ITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEK 125 (428)
Q Consensus 49 ~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~ 125 (428)
.+.|+.++++. +.+.+.+|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~--------v~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~W~~ 80 (498)
T PLN02278 10 AQSALVKLRNAGLLRTQGLIGGKWTDAYDGKTFP--------VYNPAT-GEVIANVPCMGRAETNDAIASAHDAFPSWSK 80 (498)
T ss_pred cHHHHHHhhcCCCCcccceECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhc
Confidence 35667777654 6778899999998764333323 789998 89999999999999 99999999 9999999
Q ss_pred CChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------
Q psy1960 126 NSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------- 186 (428)
Q Consensus 126 ~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------- 186 (428)
+|.++|. ++|+++ +++ |+++.+ ....+...++|||..+++.| .++|++..
T Consensus 81 ~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~ 149 (498)
T PLN02278 81 LTASERS-------KILRRW-YDL--IIANKE-DLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPF 149 (498)
T ss_pred CCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 9999999 999999 999 999988 77778899999998776542 34444321
Q ss_pred ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChh
Q psy1960 187 LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPV 265 (428)
Q Consensus 187 ~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~ 265 (428)
.+...+.++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+
T Consensus 150 ~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~ 229 (498)
T PLN02278 150 PDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPE 229 (498)
T ss_pred CCceEEEEeecccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChh
Confidence 1223456678899999999999999999999999998 999999999999999999999999999999999999998878
Q ss_pred hhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCcc
Q psy1960 266 FGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKC 345 (428)
Q Consensus 266 ~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C 345 (428)
+++.|+.||+|++|+||||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|
T Consensus 230 ~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~~------~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C 303 (498)
T PLN02278 230 IGDALLASPKVRKITFTGSTAVGKKLMAGAAATVK------RVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTC 303 (498)
T ss_pred hHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhcCC------cEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCC
Confidence 89999999999999999999999999999998887 899999999999999999999999999999999999999
Q ss_pred ccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 346 SACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 346 ~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++++|+|||++++|+|+++|+++++++++
T Consensus 304 ~a~~rv~V~~~i~~~f~~~L~~~~~~l~~ 332 (498)
T PLN02278 304 VCANRILVQEGIYDKFAEAFSKAVQKLVV 332 (498)
T ss_pred cCCcEEEEeHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998763
|
|
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-57 Score=473.95 Aligned_cols=307 Identities=26% Similarity=0.319 Sum_probs=273.3
Q ss_pred HHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCcc
Q psy1960 47 EAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPY 123 (428)
Q Consensus 47 ~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W 123 (428)
++++.++..++.. +..++++|||+|+.+.+... ++||.++++++++++.++.++ ++++++|+ |++.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~----------~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w 71 (500)
T cd07083 2 RAMREALRRVKEEFGRAYPLVIGGEWVDTKERMV----------SVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTW 71 (500)
T ss_pred hHHHHHHHHHHhhccccccceECCEEecCCCceE----------eeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 4567788888765 77889999999998755544 789986589999999999999 99999999 99999
Q ss_pred ccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----------
Q psy1960 124 EKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV----------- 186 (428)
Q Consensus 124 ~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~----------- 186 (428)
+.+|.++|. ++|+++ +++ |+++.+ ....+...++|||+.++..+ .+++++..
T Consensus 72 ~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~ 140 (500)
T cd07083 72 KDWPQEDRA-------RLLLKA-ADL--LRRRRR-ELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEV 140 (500)
T ss_pred hcCCHHHHH-------HHHHHH-HHH--HHhCHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 999999999 999999 999 999988 77777888999998765432 34454321
Q ss_pred ---ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCC
Q psy1960 187 ---LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 262 (428)
Q Consensus 187 ---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~ 262 (428)
.+.....++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|+
T Consensus 141 ~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~ 220 (500)
T cd07083 141 VPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGV 220 (500)
T ss_pred CCCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCC
Confidence 1123456678899999999999999999999999998 999999999999999999999999999999999999998
Q ss_pred ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCC
Q psy1960 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCG 342 (428)
Q Consensus 263 g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~G 342 (428)
+.++++.|+.||++++|+||||+++|+.|.+.+++++.++..++|+++|+|||||+||++|||+|.|++.+++++|.|+|
T Consensus 221 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~G 300 (500)
T cd07083 221 GEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQG 300 (500)
T ss_pred CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcC
Confidence 88899999999999999999999999999999998874344445999999999999999999999999999999999999
Q ss_pred CccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 343 QKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 343 Q~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++++|+|||++++|+|+++|+++++++++
T Consensus 301 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 301 QKCSAASRLILTQGAYEPVLERLLKRAERLSV 332 (500)
T ss_pred CCCCCCeeEEEcHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999998764
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-56 Score=470.76 Aligned_cols=286 Identities=21% Similarity=0.235 Sum_probs=257.1
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhh
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVL 137 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~ 137 (428)
.++.||||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 20 ~~~~~I~G~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~----- 85 (501)
T PLN02766 20 FTKLFINGEFVDAASGKTFE--------TRDPRT-GEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERG----- 85 (501)
T ss_pred cccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHH-----
Confidence 34679999999754333222 789998 89999999999999 99999999 997 59999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...++|||+.+++. +.+++++.. .....+.++.|+
T Consensus 86 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 159 (501)
T PLN02766 86 --RIMMKF-ADL--IEEHIE-ELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPI 159 (501)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccc
Confidence 999999 999 999988 7777888999999876542 235555431 112345678899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+++
T Consensus 160 GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~ 239 (501)
T PLN02766 160 GVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVD 239 (501)
T ss_pred eEEEEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|.||||+++|+.|++.++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 240 ~V~FTGS~~~G~~i~~~aa~~~l~------~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~s 313 (501)
T PLN02766 240 KVSFTGSTEVGRKIMQAAATSNLK------QVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEG 313 (501)
T ss_pred EEEEECcHHHHHHHHHHhhhcCCC------eEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHH
Confidence 9999999999999999998 5777 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
+||+|+++|++++++++
T Consensus 314 i~d~f~~~l~~~~~~l~ 330 (501)
T PLN02766 314 IYDEFVKKLVEKAKDWV 330 (501)
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999865
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-56 Score=467.68 Aligned_cols=283 Identities=20% Similarity=0.281 Sum_probs=255.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+++.. ++ ++||.+ ++++++++.++.++ ++|+++|+ +|+.|+.+|.++|. +
T Consensus 2 ~~~~i~g~~~~~~~~~-~~--------v~~P~t-g~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~ 64 (472)
T TIGR03374 2 HKLLINGELVSGEGEK-QP--------VYNPAT-GEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARA-------E 64 (472)
T ss_pred CCceECCEEecCCCCe-EE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------H
Confidence 4689999999753322 22 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-------------ccccceeeecccce
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDGF 200 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~GV 200 (428)
+|+++ +++ |+++++ ....+...+.|||+.+++. +.+++++.. .....+..+.|+||
T Consensus 65 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 140 (472)
T TIGR03374 65 CLLKL-ADV--IEENAQ-VFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGV 140 (472)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceE
Confidence 99999 999 999988 7777888999999865532 245554421 11234677889999
Q ss_pred EEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEE
Q psy1960 201 VAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGI 279 (428)
Q Consensus 201 V~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I 279 (428)
|++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||++++|
T Consensus 141 V~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V 219 (472)
T TIGR03374 141 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMV 219 (472)
T ss_pred EEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEE
Confidence 99999999999999999999998 99999999999999999999999885 99999999999888899999999999999
Q ss_pred EeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH
Q psy1960 280 NFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC 359 (428)
Q Consensus 280 ~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d 359 (428)
+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|
T Consensus 220 ~fTGS~~~G~~i~~~aa~~~~------~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~ 293 (472)
T TIGR03374 220 SLTGSIATGEHILSHTAPSIK------RTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYD 293 (472)
T ss_pred EEECCHHHHHHHHHHHhhccc------ceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHH
Confidence 999999999999999999888 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q psy1960 360 FCSCFLLLFLFSAS 373 (428)
Q Consensus 360 ~f~~~L~~~l~~l~ 373 (428)
+|+++|++++++++
T Consensus 294 ~f~~~l~~~~~~l~ 307 (472)
T TIGR03374 294 TLVEKLGAAVATLK 307 (472)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999865
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-56 Score=465.16 Aligned_cols=286 Identities=22% Similarity=0.241 Sum_probs=256.9
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc--cccCChhhhhhhhhh
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP--YEKNSVGLLINTEVL 137 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~--W~~~~~~~R~~~~~~ 137 (428)
..+++|||+|+.+.+...++ ++||+| ++++++++.++.++ ++|+++|+ +++. |+.+|.++|.
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~--------v~~P~t-~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~----- 68 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFP--------TIDPRN-GEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERS----- 68 (476)
T ss_pred cccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHH-----
Confidence 35689999998754333333 789998 89999999999999 99999999 9974 9999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.+++++.. +....+..+.|+
T Consensus 69 --~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 142 (476)
T cd07142 69 --RILLRF-ADL--LEKHAD-ELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPI 142 (476)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEece
Confidence 999999 999 999988 7777888999999876543 244555421 112345677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++
T Consensus 143 GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~ 222 (476)
T cd07142 143 GVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVD 222 (476)
T ss_pred eeEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888899999999999
Q ss_pred EEEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|+||||+++|+.|.+.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 223 ~v~fTGs~~~G~~v~~~aa~~~~~------~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~ 296 (476)
T cd07142 223 KVAFTGSTEVGKIIMQLAAKSNLK------PVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHES 296 (476)
T ss_pred EEEEECcHHHHHHHHHHHHHcCCC------eEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHH
Confidence 99999999999999999986 777 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 297 i~d~f~~~l~~~~~~~~ 313 (476)
T cd07142 297 IYDEFVEKAKARALKRV 313 (476)
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 99999999999998864
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-56 Score=465.23 Aligned_cols=285 Identities=21% Similarity=0.275 Sum_probs=259.7
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
++++|||+|+.+.+... ++||.++++++++++.++.++ ++|+++|+ |++.|+.++.++|. +
T Consensus 1 ~~~~i~g~~~~~~~~~~----------v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~-------~ 63 (473)
T cd07097 1 YRNYIDGEWVAGGDGEE----------NRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARA-------D 63 (473)
T ss_pred CCceECCEEecCCCCce----------eECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------H
Confidence 46799999997755443 789995589999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ ++++.+ ....+...++|||..+++.+ .++|++.. .+...+.++.|+|||
T Consensus 64 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 139 (473)
T cd07097 64 ILDKA-GDE--LEARKE-ELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVV 139 (473)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeE
Confidence 99999 999 999988 77778889999998776543 35555421 112245677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++++|+
T Consensus 140 ~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ 219 (473)
T cd07097 140 GLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAVS 219 (473)
T ss_pred EEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 220 fTGs~~~g~~i~~~aa~~~~------~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~ 293 (473)
T cd07097 220 FTGSTAVGRRIAAAAAARGA------RVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDR 293 (473)
T ss_pred EECcHHHHHHHHHHHhccCC------cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 294 f~~~l~~~~~~~~~ 307 (473)
T cd07097 294 FVEALVERTKALKV 307 (473)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998774
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-56 Score=465.12 Aligned_cols=288 Identities=23% Similarity=0.243 Sum_probs=256.3
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
...++++|||+|+.+.....++ ++||.+ ++++++++.++.++ ++++++|+ +++.|+++|.++|.
T Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~--------~~nP~t-~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~----- 84 (480)
T cd07111 19 DRSFGHFINGKWVKPENRKSFP--------TINPAT-GEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA----- 84 (480)
T ss_pred cccccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 4567899999998754322222 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-h------hhhhhhccc--cccceeeecccceEEEECCCc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-S------ALTFYLEVL--ASNLGRGEGLDGFVAAVSPFN 208 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-~------~l~~~~~~~--~~~~~~~~~p~GVV~~I~P~N 208 (428)
++|+++ +++ |+++.+ ....+...++|||+.+++. + .+++++... .......+.|+|||++|+|||
T Consensus 85 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN 158 (480)
T cd07111 85 --RHLYRI-ARH--IQKHQR-LFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDTELAGWKPVGVVGQIVPWN 158 (480)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccceecceEEEECCCc
Confidence 999999 999 999988 6667788999999877653 2 233333211 112244567899999999999
Q ss_pred hhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhh
Q psy1960 209 FTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPT 287 (428)
Q Consensus 209 fP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~ 287 (428)
||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++ +++..|+.||+++.|+||||+.+
T Consensus 159 ~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~l~~~~~v~~v~ftGs~~~ 237 (480)
T cd07111 159 FPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNG-SFGSALANHPGVDKVAFTGSTEV 237 (480)
T ss_pred cHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCc-hHHHHHhcCCCcCEEEEECCHHH
Confidence 999999999999998 9999999999999999999999999999999999999976 57999999999999999999999
Q ss_pred HHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHH
Q psy1960 288 FNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLL 367 (428)
Q Consensus 288 g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~ 367 (428)
|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++
T Consensus 238 g~~v~~~aa~~~~------~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~ 311 (480)
T cd07111 238 GRALRRATAGTGK------KLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKE 311 (480)
T ss_pred HHHHHHHHhccCC------cEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHH
Confidence 9999999998887 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCc
Q psy1960 368 FLFSASV 374 (428)
Q Consensus 368 ~l~~l~v 374 (428)
+++++++
T Consensus 312 ~~~~~~v 318 (480)
T cd07111 312 RMSHLRV 318 (480)
T ss_pred HHHhcCC
Confidence 9998764
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-56 Score=494.89 Aligned_cols=315 Identities=22% Similarity=0.273 Sum_probs=280.9
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
..|++.++|. .+.+++.+.++++++.++....+.+||| +..... ++||+++++++++++.++.++
T Consensus 522 r~n~~~~~~~-~~~~~~~~~~al~~~~~~~~~~~~~i~g----~~~~~~----------v~nP~~~~~~vg~v~~a~~~~ 586 (1038)
T PRK11904 522 RKNSKGLNLN-DRSELEPLAAAIAAFLEKQWQAGPIING----EGEARP----------VVSPADRRRVVGEVAFADAEQ 586 (1038)
T ss_pred cCCCCcccCC-CHHHHHHHHHHHHHHHhcCceecceEcC----CCCeEE----------EECCCCCCeeEEEEeCCCHHH
Confidence 5899999998 4678999999999998776777888899 333344 789999766999999999999
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhh
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTF 182 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~ 182 (428)
++|+++|+ |++.|+.+|.++|+ ++|+++ +++ ++++.+ ....+...+.||++.++.. +.++|
T Consensus 587 v~~Ai~aA~~A~~~W~~~~~~~Ra-------~iL~ka-Adl--l~~~~~-eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ 655 (1038)
T PRK11904 587 VEQALAAARAAFPAWSRTPVEERA-------AILERA-ADL--LEANRA-ELIALCVREAGKTLQDAIAEVREAVDFCRY 655 (1038)
T ss_pred HHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 999987 7777888999999876643 45666
Q ss_pred hhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH
Q psy1960 183 YLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 183 ~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
|+.. .+......+.|+|||++|+|||||+.....++++||+ ||+||+|||+.+|+++..++++++
T Consensus 656 ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~ 735 (1038)
T PRK11904 656 YAAQARRLFGAPEKLPGPTGESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLH 735 (1038)
T ss_pred HHHHHHHhhCCCcccCCCCCceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHH
Confidence 6431 0112234456789999999999999999999999998 999999999999999999999999
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|++.++++.|+.||+|++|+||||+++|+.|++.++++.. ..+|+++|+||||++||++|||+|
T Consensus 736 eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g---~~~pvi~ElGGkNa~IV~~dAdld 812 (1038)
T PRK11904 736 EAGIPKDVLQLLPGDGATVGAALTADPRIAGVAFTGSTETARIINRTLAARDG---PIVPLIAETGGQNAMIVDSTALPE 812 (1038)
T ss_pred HhCcCcceEEEeeCCchHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccC---CCceEEEEcCCcCeEEECCCCCHH
Confidence 99999999999999998899999999999999999999999999999887632 133899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|++.+++|+|.++||+|+|++|+|||++++|+|+++|++++++++|
T Consensus 813 ~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~fl~~L~~~~~~l~v 859 (1038)
T PRK11904 813 QVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKV 859 (1038)
T ss_pred HHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999998764
|
|
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-56 Score=465.89 Aligned_cols=287 Identities=21% Similarity=0.267 Sum_probs=259.1
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
....+++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ +++.|+.+|.++|.
T Consensus 4 ~~~~~~~I~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~----- 69 (488)
T PRK13252 4 QPLQSLYIDGAYVEATSGETFE--------VINPAT-GEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERS----- 69 (488)
T ss_pred CccccccCCCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-----
Confidence 3556899999999754333333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ ++++.+ ....+...++|||..+++. +.+++++.. .+...+.++.|+
T Consensus 70 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~Pl 143 (488)
T PRK13252 70 --RILRRA-VDI--LRERND-ELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPL 143 (488)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeee
Confidence 999999 999 999988 7777788999999876653 345555431 112345677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++. +++.|+.||+++
T Consensus 144 GVv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~-~~~~L~~~~~vd 222 (488)
T PRK13252 144 GVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGR-VGAWLTEHPDIA 222 (488)
T ss_pred eEEEEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcH-HHHHHhcCCCCC
Confidence 9999999999999999999999998 99999999999999999999999999999999999999776 899999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 223 ~V~fTGS~~~g~~i~~~aa~~l~------~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i 296 (488)
T PRK13252 223 KVSFTGGVPTGKKVMAAAAASLK------EVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSI 296 (488)
T ss_pred EEEEECcHHHHHHHHHHHhhcCC------cEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHH
Confidence 99999999999999999998877 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 297 ~d~f~~~l~~~~~~~~ 312 (488)
T PRK13252 297 KAAFEARLLERVERIR 312 (488)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999864
|
|
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-55 Score=467.47 Aligned_cols=285 Identities=21% Similarity=0.244 Sum_probs=255.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
...+|||+|+.+.+...++ ++||++ ++++++++.++.+| ++|+++|+ +|+ .|+.++.++|.
T Consensus 58 ~~~~I~G~~~~~~~~~~~~--------v~~P~t-g~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~------ 122 (538)
T PLN02466 58 TQLLINGQFVDAASGKTFP--------TLDPRT-GEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERS------ 122 (538)
T ss_pred ccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHH------
Confidence 4689999999754433333 789998 89999999999999 99999999 997 49999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .....+..+.|+|
T Consensus 123 -~~L~~~-a~~--l~~~~~-ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~G 197 (538)
T PLN02466 123 -RILLRF-ADL--LEKHND-ELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIG 197 (538)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecce
Confidence 999999 999 999988 7777888999999876542 245555421 1112356788899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||++++
T Consensus 198 VV~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~ 277 (538)
T PLN02466 198 VAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDK 277 (538)
T ss_pred EEEEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999988888999999999999
Q ss_pred EEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+++|+.|++.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 278 V~FTGS~~~G~~v~~~aa~~~l~------pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i 351 (538)
T PLN02466 278 LAFTGSTDTGKIVLELAAKSNLK------PVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERV 351 (538)
T ss_pred EEEECCHHHHHHHHHHHHhcCCC------cEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHH
Confidence 9999999999999999984 777 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++.+++
T Consensus 352 ~d~f~~~l~~~~~~~~ 367 (538)
T PLN02466 352 YDEFVEKAKARALKRV 367 (538)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999888754
|
|
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-55 Score=464.83 Aligned_cols=285 Identities=20% Similarity=0.252 Sum_probs=258.5
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc-----CccccCChhhhhhhh
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL-----CPYEKNSVGLLINTE 135 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~-----~~W~~~~~~~R~~~~ 135 (428)
.+++|||+|+.+.....++ ++||++ ++++++++.++.++ ++|+++|+ +| +.|+.+|..+|.
T Consensus 8 ~~~~I~g~~~~~~~~~~~~--------v~~P~t-~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~--- 75 (503)
T PLN02467 8 RQLFIGGEWREPVLGKRIP--------VVNPAT-EETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRA--- 75 (503)
T ss_pred cCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHH---
Confidence 4689999998764333323 789999 89999999999999 99999999 99 899999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc--------------c--ccccee
Q psy1960 136 VLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV--------------L--ASNLGR 193 (428)
Q Consensus 136 ~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~--------------~--~~~~~~ 193 (428)
++|+++ +++ |+++++ .+..+...+.|||+.+++.| .++|++.. + ....+.
T Consensus 76 ----~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (503)
T PLN02467 76 ----KYLRAI-AAK--ITERKS-ELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYV 147 (503)
T ss_pred ----HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEE
Confidence 999999 999 999988 77788899999998776543 34555420 0 112456
Q ss_pred eecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhc
Q psy1960 194 GEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA 272 (428)
Q Consensus 194 ~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~ 272 (428)
++.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.
T Consensus 148 ~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~ 227 (503)
T PLN02467 148 LKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLAS 227 (503)
T ss_pred EEecCceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhc
Confidence 778899999999999999999999999998 9999999999999999999999999999999999999988889999999
Q ss_pred CCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEE
Q psy1960 273 SPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMY 352 (428)
Q Consensus 273 ~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~ 352 (428)
||++++|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|
T Consensus 228 ~~~v~~v~fTGs~~~g~~v~~~aa~~~~------~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~ 301 (503)
T PLN02467 228 HPGVDKIAFTGSTATGRKIMTAAAQMVK------PVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLL 301 (503)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHhccCC------cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEE
Confidence 9999999999999999999999999888 8999999999999999999999999999999999999999999999
Q ss_pred EeCCchHHHHHHHHHHHhcCC
Q psy1960 353 VPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 353 V~~si~d~f~~~L~~~l~~l~ 373 (428)
||++++|+|+++|++++++++
T Consensus 302 V~~~i~d~f~~~l~~~~~~l~ 322 (503)
T PLN02467 302 VHERIASEFLEKLVKWAKNIK 322 (503)
T ss_pred EcHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999865
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-55 Score=461.92 Aligned_cols=285 Identities=20% Similarity=0.253 Sum_probs=256.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
.++||||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|.++|.
T Consensus 6 ~~~~I~g~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~------ 70 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYN--------TINPTD-GSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRG------ 70 (486)
T ss_pred cCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHH------
Confidence 4689999999754333223 789999 79999999999999 99999999 997 59999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc---------c-------cccceeee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV---------L-------ASNLGRGE 195 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~---------~-------~~~~~~~~ 195 (428)
++|+++ +++ |+++.+ ....+..++.|||..+++. +.++|++.. . ....+.++
T Consensus 71 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r 145 (486)
T cd07140 71 -RLMYRL-ADL--MEEHQE-ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKR 145 (486)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEe
Confidence 999999 999 999988 7777788999999876642 244554420 0 11245678
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||
T Consensus 146 ~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~ 225 (486)
T cd07140 146 EPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHP 225 (486)
T ss_pred eccceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCC
Confidence 8999999999999999999999999998 999999999999999999999999999999999999998888999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
+|++|+||||+++|+.|++++++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 226 ~v~~v~ftGs~~~g~~i~~~aa~~~l~------~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V 299 (486)
T cd07140 226 DVRKLGFTGSTPIGKHIMKSCAVSNLK------KVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFV 299 (486)
T ss_pred CCCEEEEECcHHHHHHHHHHHHhcCCC------eEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEE
Confidence 99999999999999999999986 777 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCC
Q psy1960 354 PESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++||+|+++|++++++++
T Consensus 300 ~~~i~~~f~~~l~~~~~~l~ 319 (486)
T cd07140 300 EESIHDEFVRRVVEEVKKMK 319 (486)
T ss_pred cHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999976
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-55 Score=461.77 Aligned_cols=283 Identities=24% Similarity=0.288 Sum_probs=254.5
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc-cccCChhhhhhhhhhHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP-YEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~-W~~~~~~~R~~~~~~~~~i 141 (428)
+||||+|+.+.+....+ ++||.+ ++++++++.++.++ ++|+++|+ |++. |+++|.++|. ++
T Consensus 2 ~~i~g~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~-------~~ 65 (477)
T cd07113 2 HFIDGRPVAGQSEKRLD--------ITNPAT-EQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERG-------RI 65 (477)
T ss_pred CeECCEEecCCCCCeEe--------eeCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHH-------HH
Confidence 58999998764433222 789998 89999999999999 99999999 9985 9999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-----c-------------cccceeeec
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-----L-------------ASNLGRGEG 196 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-----~-------------~~~~~~~~~ 196 (428)
|+++ +++ |+++.+ ....+..+++|||..+++. +.+++++.. + ....+.++.
T Consensus 66 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (477)
T cd07113 66 LLRL-ADL--IEQHGE-ELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRRE 141 (477)
T ss_pred HHHH-HHH--HHHCHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEe
Confidence 9999 999 999988 7777788999999876542 344444321 0 012356778
Q ss_pred ccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCC
Q psy1960 197 LDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPY 275 (428)
Q Consensus 197 p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~ 275 (428)
|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+.++++++|+|+|++|+++|++. +++.|+.||+
T Consensus 142 P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~-~~~~L~~~~~ 220 (477)
T cd07113 142 PVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGA-VGAQLISHPD 220 (477)
T ss_pred ecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCch-HHHHHhcCCC
Confidence 899999999999999999999999998 99999999999999999999999999999999999999876 8999999999
Q ss_pred eeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 276 LAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 276 v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
+++|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+
T Consensus 221 v~~V~fTGS~~~G~~i~~~aa~~~~------~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~ 294 (477)
T cd07113 221 VAKVSFTGSVATGKKIGRQAASDLT------RVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHR 294 (477)
T ss_pred CCEEEEECcHHHHHHHHHHHHhhcC------ceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECH
Confidence 9999999999999999999998887 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCCc
Q psy1960 356 SLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|+++|+++++++++
T Consensus 295 ~i~d~f~~~l~~~~~~~~~ 313 (477)
T cd07113 295 SKFDELVTKLKQALSSFQV 313 (477)
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 9999999999999998763
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-55 Score=460.87 Aligned_cols=283 Identities=23% Similarity=0.269 Sum_probs=255.2
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc-cccCChhhhhhhhhhHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP-YEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~-W~~~~~~~R~~~~~~~~~ 140 (428)
+++|||+|+.++.... ++||++ ++++++++.++.++ ++|+++|+ ||+. |+++|.++|. +
T Consensus 2 ~~~i~g~~~~~~~~~~----------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~-------~ 63 (481)
T TIGR03216 2 RNFINGAFVESGKTFA----------NINPVD-GRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERA-------D 63 (481)
T ss_pred CceECCEEecCCCeEE----------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHH-------H
Confidence 5799999997554444 789998 89999999999999 99999999 9997 9999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc--------------c--cccceeeecc
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV--------------L--ASNLGRGEGL 197 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~--------------~--~~~~~~~~~p 197 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.+++++.. . +...+.++.|
T Consensus 64 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 139 (481)
T TIGR03216 64 LLYAV-ADE--IERRFD-DFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKP 139 (481)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEec
Confidence 99999 999 999988 7777888999999866542 234554321 0 1123466788
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCCh-hhhhhhhcCCC
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP-VFGDTITASPY 275 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~-~~g~~L~~~~~ 275 (428)
+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++. ++++.|..||+
T Consensus 140 ~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~ 219 (481)
T TIGR03216 140 LGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPG 219 (481)
T ss_pred cceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCC
Confidence 99999999999999999999999998 99999999999999999999999999999999999999665 58899999999
Q ss_pred eeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 276 LAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 276 v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
+++|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+
T Consensus 220 vd~v~fTGS~~~G~~i~~~aa~~~~------~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~ 293 (481)
T TIGR03216 220 VDAITFTGETRTGSAIMKAAADGVK------PVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVER 293 (481)
T ss_pred CCEEEEECCHHHHHHHHHHHhcCCC------eEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcH
Confidence 9999999999999999999998887 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCCc
Q psy1960 356 SLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|+++|.++++++++
T Consensus 294 ~i~~~f~~~l~~~~~~~~~ 312 (481)
T TIGR03216 294 PIFDRFVAALKARAESLKI 312 (481)
T ss_pred HHHHHHHHHHHHHHHhcCC
Confidence 9999999999999998764
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-55 Score=460.09 Aligned_cols=284 Identities=23% Similarity=0.270 Sum_probs=256.7
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
.++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ +++.|+.+|.++|. ++
T Consensus 2 ~~~i~g~~~~~~~~~~~~--------~~nP~t-~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~~ 65 (475)
T cd07117 2 GLFINGEWVKGSSGETID--------SYNPAN-GETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA-------NI 65 (475)
T ss_pred CceECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HH
Confidence 478999998764333223 789998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ |+++++ ....+...+.|||+.+++. +.+++++.. .....+.+++|+|||+
T Consensus 66 L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~ 141 (475)
T cd07117 66 LNKI-ADI--IDENKE-LLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVG 141 (475)
T ss_pred HHHH-HHH--HHHCHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceEE
Confidence 9999 999 999988 7777888999999877653 245555421 1112456788999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.++++.|+.||+++.|+|
T Consensus 142 ~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~f 220 (475)
T cd07117 142 QIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLAF 220 (475)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999 99999999999999999999999985 9999999999988889999999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHH
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFC 361 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f 361 (428)
|||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 221 TGs~~~g~~i~~~aa~~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f 294 (475)
T cd07117 221 TGSTEVGRDVAIAAAKKLI------PATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEF 294 (475)
T ss_pred ECcHHHHHHHHHHHhccCC------cEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHH
Confidence 9999999999999999888 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCc
Q psy1960 362 SCFLLLFLFSASV 374 (428)
Q Consensus 362 ~~~L~~~l~~l~v 374 (428)
+++|.++++++++
T Consensus 295 ~~~l~~~~~~l~~ 307 (475)
T cd07117 295 VAKLKEKFENVKV 307 (475)
T ss_pred HHHHHHHHHhccC
Confidence 9999999998753
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-55 Score=462.71 Aligned_cols=285 Identities=20% Similarity=0.230 Sum_probs=256.7
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
.++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+++|.++|. ++
T Consensus 2 ~~~i~g~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~i 65 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFE--------TLSPAT-NEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK-------RY 65 (488)
T ss_pred CccCCCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HH
Confidence 468999999765433222 789998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+...++|++..+++.+ .++++... .....+.++.|+|||++
T Consensus 66 L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~ 141 (488)
T TIGR02299 66 LHKI-ADL--IEQHAD-EIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPVDTHLNYTVRVPVGPVGL 141 (488)
T ss_pred HHHH-HHH--HHHhHH-HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccCCCceEEEEEEecceEEE
Confidence 9999 999 999988 77777889999998766532 34444321 11223566788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++++|+||
T Consensus 142 I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fT 221 (488)
T TIGR02299 142 ITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFT 221 (488)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999888889999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCS 362 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~ 362 (428)
||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+
T Consensus 222 GS~~~G~~i~~~aa~~l~------~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~ 295 (488)
T TIGR02299 222 GETATGSIIMRNGADTLK------RFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFV 295 (488)
T ss_pred CcHHHHHHHHHHHHhcCC------eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHH
Confidence 999999999999998888 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCc
Q psy1960 363 CFLLLFLFSASV 374 (428)
Q Consensus 363 ~~L~~~l~~l~v 374 (428)
++|+++++++++
T Consensus 296 ~~l~~~~~~l~~ 307 (488)
T TIGR02299 296 EKLVERVRAIRV 307 (488)
T ss_pred HHHHHHHhhCCc
Confidence 999999998763
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-55 Score=494.78 Aligned_cols=320 Identities=21% Similarity=0.237 Sum_probs=281.7
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
..|.+.+||. ....++.+.+++.....+....+.+|+|+. .+..... ++||+++++++++++.++.++
T Consensus 616 r~ns~g~d~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~----------v~nPa~~~~~vg~v~~a~~~d 683 (1318)
T PRK11809 616 RANSAGLDLA-NEHRLASLSSALLASAHQKWQAAPMLEDPV-AAGEMSP----------VINPADPRDIVGYVREATPAE 683 (1318)
T ss_pred CCCCCCcCCC-CHHHHHHHHHHHHHHHcCCcccCCcccCcC-CCCCEEE----------eECCCCCCeeEEEEeCCCHHH
Confidence 6788889987 457788999999888765444455668843 2233333 789999889999999999999
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhh
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTF 182 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~ 182 (428)
++|+++|+ +++.|+.+|..+|+ ++|+++ +++ |+++.+ ....+...+.||++.++.. ++++|
T Consensus 684 v~~Av~aA~~A~~~W~~~p~~eRa-------~iL~r~-Adl--le~~~~-eL~~l~~~EaGKt~~~A~~EV~eaidflry 752 (1318)
T PRK11809 684 VEQALESAVNAAPIWFATPPAERA-------AILERA-ADL--MEAQMQ-TLMGLLVREAGKTFSNAIAEVREAVDFLRY 752 (1318)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 999988 7777888999999876654 57888
Q ss_pred hhccccc-cceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEee
Q psy1960 183 YLEVLAS-NLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP 260 (428)
Q Consensus 183 ~~~~~~~-~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~ 260 (428)
|+..... .....+.|+|||++|+|||||+.+...++++||+ ||+||+|||+++|+++..++++++++|+|+|++|+++
T Consensus 753 yA~~a~~~~~~~~~~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~ 832 (1318)
T PRK11809 753 YAGQVRDDFDNDTHRPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLP 832 (1318)
T ss_pred HHHHHHHhcCCceeecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEee
Confidence 8865322 1123456799999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred CCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhc
Q psy1960 261 ADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340 (428)
Q Consensus 261 g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~ 340 (428)
|++.++|+.|+.||+|++|+||||+++|+.|.+.+++++.+....+|+++|+||||++||++|||+|+|++.+++|+|.+
T Consensus 833 G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~ 912 (1318)
T PRK11809 833 GRGETVGAALVADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDS 912 (1318)
T ss_pred CCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhc
Confidence 99988999999999999999999999999999999988632112238999999999999999999999999999999999
Q ss_pred CCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 341 CGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 341 ~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+||+|++++++|||++|+|+|+++|++++++++
T Consensus 913 aGQrCsA~~rl~V~e~Iad~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 913 AGQRCSALRVLCLQDDVADRTLKMLRGAMAECR 945 (1318)
T ss_pred CCCccccCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999876
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-55 Score=458.70 Aligned_cols=285 Identities=20% Similarity=0.232 Sum_probs=256.4
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
++.+|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.+|.++|. +
T Consensus 1 ~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~ 64 (478)
T cd07085 1 LKLFINGEWVESKTTEWLD--------VYNPAT-GEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQ-------Q 64 (478)
T ss_pred CCceECCEEecCCCCCeEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------H
Confidence 3679999999765433323 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...++|||..+++.+ .++++... .+...+.++.|+|||
T Consensus 65 ~L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 140 (478)
T cd07085 65 VMFKF-RQL--LEENLD-ELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVV 140 (478)
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEE
Confidence 99999 999 999887 77777889999998776542 34444320 112246778889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|+ .+.++.|+.||+++.|+
T Consensus 141 ~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~-~~~~~~L~~~~~v~~V~ 219 (478)
T cd07085 141 AGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGG-KEAVNALLDHPDIKAVS 219 (478)
T ss_pred EEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecC-HHHHHHHhcCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999985 46799999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+
T Consensus 220 fTGs~~~g~~i~~~aa~~~~------~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~ 293 (478)
T cd07085 220 FVGSTPVGEYIYERAAANGK------RVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADE 293 (478)
T ss_pred EECCHHHHHHHHHHHhhcCC------cEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHH
Confidence 99999999999999998887 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 294 f~~~L~~~~~~l~~ 307 (478)
T cd07085 294 WIPKLVERAKKLKV 307 (478)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998874
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-55 Score=459.58 Aligned_cols=284 Identities=20% Similarity=0.215 Sum_probs=256.9
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. ++
T Consensus 2 ~~~I~g~~~~~~~~~~~~--------v~~P~t-~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~~ 65 (480)
T cd07559 2 DNFINGEWVAPSKGEYFD--------NYNPVN-GKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA-------NI 65 (480)
T ss_pred CccCCCEEecCCCCCeEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HH
Confidence 578999999765433333 789998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ ++++.+ ....+..++.||++.+++. +.+++++.. .+...+..+.|+|||+
T Consensus 66 L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~ 141 (480)
T cd07559 66 LNKI-ADR--IEENLE-LLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVG 141 (480)
T ss_pred HHHH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceEE
Confidence 9999 999 999988 7777788899999876653 244554321 1123456678899999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++ +|+|++|+++|++.++++.|+.||++++|+|
T Consensus 142 ~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~f 220 (480)
T cd07559 142 QIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLAF 220 (480)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEEE
Confidence 999999999999999999999 99999999999999999999999996 9999999999988889999999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCC-----CHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASA-----NVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dA-----Dld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
|||+++|+.|.+.++++++ |+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 221 TGs~~~g~~i~~~aa~~~~------p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~ 294 (480)
T cd07559 221 TGSTTVGRLIMQYAAENLI------PVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQES 294 (480)
T ss_pred ECcHHHHHHHHHHHhccCC------cEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHH
Confidence 9999999999999999888 899999999999999999 99999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 295 i~d~f~~~l~~~~~~l~~ 312 (480)
T cd07559 295 IYDEFIERAVERFEAIKV 312 (480)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 999999999999999763
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-55 Score=494.22 Aligned_cols=319 Identities=22% Similarity=0.262 Sum_probs=283.1
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHh
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPV 109 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~ 109 (428)
...|++.++|.. ...++.+.++++++.++....+.+|+|+... ++... ++||+++++++++++.++++
T Consensus 523 ~r~n~~~~~~~~-~~~~~~l~~al~~~~~~~~~~~~~i~g~~~~-~~~~~----------v~nP~~~~~~vg~v~~a~~~ 590 (1208)
T PRK11905 523 ERRNSKGLDLSD-EATLAALDEALNAFAAKTWHAAPLLAGGDVD-GGTRP----------VLNPADHDDVVGTVTEASAE 590 (1208)
T ss_pred CCCCCCCccCCC-HHHHHHHHHHHHHHHccCeeecceecccccc-CCeee----------EECCCCCCceEEEEeCCCHH
Confidence 378999999985 4568899999998877655566666766553 33333 78999989999999999999
Q ss_pred H-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhh
Q psy1960 110 L-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALT 181 (428)
Q Consensus 110 ~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~ 181 (428)
+ ++|+++|+ |++.|+.+|.++|+ ++|+++ +++ ++++.+ ....+...+.||++.++.. +.++
T Consensus 591 ~v~~Av~aA~~A~~~W~~~~~~~Ra-------~iL~ra-Adl--l~~~~~-eL~~l~~~E~GKt~~ea~~Ev~eaid~lr 659 (1208)
T PRK11905 591 DVERALAAAQAAFPEWSATPAAERA-------AILERA-ADL--MEAHMP-ELFALAVREAGKTLANAIAEVREAVDFLR 659 (1208)
T ss_pred HHHHHHHHHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 9 99999999 99999999999999 999999 999 999877 6777788899999876643 4678
Q ss_pred hhhcccccc-ceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEe
Q psy1960 182 FYLEVLASN-LGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFV 259 (428)
Q Consensus 182 ~~~~~~~~~-~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv 259 (428)
||+...... ....+.|+|||++|+|||||+.....++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|
T Consensus 660 ~ya~~a~~~~~~~~~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV 739 (1208)
T PRK11905 660 YYAAQARRLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLL 739 (1208)
T ss_pred HHHHHHHHhcCCceecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEe
Confidence 887643221 224566799999999999999999999999998 999999999999999999999999999999999999
Q ss_pred eCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhh
Q psy1960 260 PADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFE 339 (428)
Q Consensus 260 ~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~ 339 (428)
+|++.++++.|+.||+|++|+||||+++|+.|++.++++.. ..+|+++|+||||++||++|||+|.|++.+++|+|.
T Consensus 740 ~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~A~~~~---~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~ 816 (1208)
T PRK11905 740 PGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSG---PPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFD 816 (1208)
T ss_pred eCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHHHhhcC---CCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHh
Confidence 99998899999999999999999999999999999998752 234999999999999999999999999999999999
Q ss_pred cCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 340 YCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 340 ~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++||+|+|++|+|||++++|+|+++|++++++++|
T Consensus 817 ~aGQ~CsA~~rl~V~~si~d~f~e~L~~~~~~l~v 851 (1208)
T PRK11905 817 SAGQRCSALRVLCLQEDVADRVLTMLKGAMDELRI 851 (1208)
T ss_pred cCCCccccCcEEEEehhHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999763
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-55 Score=455.95 Aligned_cols=283 Identities=24% Similarity=0.277 Sum_probs=255.4
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++++++|+ |++.|+++|.++|. ++|
T Consensus 1 ~~i~g~~~~~~~~~~~~--------~~~P~~-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L 64 (466)
T cd07138 1 FYIDGAWVAPAGTETID--------VINPAT-EEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERA-------ALL 64 (466)
T ss_pred CeECCEeecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHH
Confidence 47999999865433223 789998 89999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc--------ccccceeeecccceEEEECCC
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV--------LASNLGRGEGLDGFVAAVSPF 207 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~--------~~~~~~~~~~p~GVV~~I~P~ 207 (428)
+++ +++ |+++.+ ....+...++|||..+++. +.++++... .....+.++.|+|||++|+||
T Consensus 65 ~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~ 140 (466)
T cd07138 65 ERI-AEA--YEARAD-ELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRGNSLVVREPIGVCGLITPW 140 (466)
T ss_pred HHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccccCceEEEEEeecceEEEECCC
Confidence 999 999 999988 7777788999999865532 234444431 112345667889999999999
Q ss_pred chhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChh
Q psy1960 208 NFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVP 286 (428)
Q Consensus 208 NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~ 286 (428)
|||+...++++++||+ ||+||+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.||+++.|+||||++
T Consensus 141 N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~ 220 (466)
T cd07138 141 NWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTR 220 (466)
T ss_pred ccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHH
Confidence 9999999999999998 999999999999999999999999999999999999998888999999999999999999999
Q ss_pred hHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHH
Q psy1960 287 TFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366 (428)
Q Consensus 287 ~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~ 366 (428)
+|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+
T Consensus 221 ~g~~i~~~aa~~~~------~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 294 (466)
T cd07138 221 AGKRVAEAAADTVK------RVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAA 294 (466)
T ss_pred HHHHHHHHHhccCC------eEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHH
Confidence 99999999998887 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCC
Q psy1960 367 LFLFSAS 373 (428)
Q Consensus 367 ~~l~~l~ 373 (428)
+++++++
T Consensus 295 ~~~~~~~ 301 (466)
T cd07138 295 AAAEAYV 301 (466)
T ss_pred HHHHhcC
Confidence 9998865
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-54 Score=455.43 Aligned_cols=284 Identities=23% Similarity=0.248 Sum_probs=252.2
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
.++|||+|+.+.+. .++ ++||.+ ++++++++.++.++ ++++++|+ |++.|+++|..+|. ++
T Consensus 2 ~~~i~g~~~~~~~~-~~~--------~~~P~t-~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~ 64 (487)
T PRK09457 2 TLWINGDWIAGQGE-AFE--------SRNPVS-GEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQ-------AI 64 (487)
T ss_pred CceECCEEecCCCC-EEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHH-------HH
Confidence 37899999876432 222 789999 79999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc------------cccccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE------------VLASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~------------~~~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+...+.|||+.+++.+ .++++.. ......+.++.|+|||++
T Consensus 65 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 140 (487)
T PRK09457 65 VERF-AAL--LEENKE-ELAEVIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVVAV 140 (487)
T ss_pred HHHH-HHH--HHhHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEEEE
Confidence 9999 999 999988 77778889999998766542 2332211 012234566788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++| +.++++.|+.||++++|+||
T Consensus 141 I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~v~~V~fT 219 (487)
T PRK09457 141 FGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG-GRETGKALAAHPDIDGLLFT 219 (487)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999 56789999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch-HHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF-CFC 361 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~-d~f 361 (428)
||+++|+.|.++++++..+ ++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++| |+|
T Consensus 220 GS~~~G~~i~~~aa~~~~~-----~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f 294 (487)
T PRK09457 220 GSANTGYLLHRQFAGQPEK-----ILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAF 294 (487)
T ss_pred CCHHHHHHHHHHHhhcCCC-----cEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHH
Confidence 9999999999988766432 7899999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHHHHHhcCCc
Q psy1960 362 SCFLLLFLFSASV 374 (428)
Q Consensus 362 ~~~L~~~l~~l~v 374 (428)
+++|+++++++++
T Consensus 295 ~~~l~~~~~~~~v 307 (487)
T PRK09457 295 LARLVAVAKRLTV 307 (487)
T ss_pred HHHHHHHHhcCcC
Confidence 9999999998764
|
|
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-54 Score=454.28 Aligned_cols=286 Identities=24% Similarity=0.281 Sum_probs=255.4
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-ccc-cCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-PYE-KNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-~W~-~~~~~~R~~~~~~~ 138 (428)
.+.+|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ ||+ .|+ .+|.++|.
T Consensus 7 ~~~~I~G~~~~~~~~~~~~--------v~~P~t-~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~------ 71 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVK--------VYNPST-GKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRG------ 71 (481)
T ss_pred cCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHH------
Confidence 5789999998764333222 789998 89999999999999 99999999 998 599 99999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++++ ....+..+++|||..+... +.+++++.. .....+..+.|+|
T Consensus 72 -~~L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~G 146 (481)
T cd07143 72 -RCLSKL-ADL--MERNLD-YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIG 146 (481)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecce
Confidence 999999 999 999988 7777888999999854321 244554321 1122456778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++++
T Consensus 147 Vv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~ 226 (481)
T cd07143 147 VCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDK 226 (481)
T ss_pred eEEEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999988888999999999999
Q ss_pred EEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+++|+.|.+.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++
T Consensus 227 V~fTGs~~~G~~i~~~aa~~~~~------~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i 300 (481)
T cd07143 227 VAFTGSTLVGRKVMEAAAKSNLK------KVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGI 300 (481)
T ss_pred EEEECchHHHHHHHHHHHHhcCC------EEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhH
Confidence 9999999999999998885 566 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 301 ~d~f~~~l~~~~~~~~~ 317 (481)
T cd07143 301 YDKFVKRFKEKAKKLKV 317 (481)
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 99999999999998764
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-54 Score=454.86 Aligned_cols=283 Identities=19% Similarity=0.250 Sum_probs=255.4
Q ss_pred EEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHH
Q psy1960 66 VIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYF 143 (428)
Q Consensus 66 ~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~ 143 (428)
||||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.+|.++|. ++|+
T Consensus 1 ~i~g~~~~~~~~~~~~--------~~nP~t-~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~~L~ 64 (467)
T TIGR01804 1 FIDGEWVEASAGETRE--------IINPAN-QEVIATVAEATREDVERAIAAARRAQGEWASMTPEERG-------RILR 64 (467)
T ss_pred CCCCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHH
Confidence 5899998754332222 789998 89999999999999 99999999 99999999999999 9999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhcc------------ccccceeeecccceEEEE
Q psy1960 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEV------------LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 144 ~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I 204 (428)
++ +++ |+++++ ....+...++|||..++. . +.+++++.. .....+..+.|+|||++|
T Consensus 65 ~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I 140 (467)
T TIGR01804 65 RI-AEL--IRERNE-ELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVCVGI 140 (467)
T ss_pred HH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEEEEE
Confidence 99 999 999988 777778899999987762 2 245554431 012235677889999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeC
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTG 283 (428)
+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|+|||
T Consensus 141 ~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTG 220 (467)
T TIGR01804 141 GAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTG 220 (467)
T ss_pred CCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999998 999999999999999999999999999999999999998788999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHH
Q psy1960 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSC 363 (428)
Q Consensus 284 S~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~ 363 (428)
|+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++
T Consensus 221 s~~~g~~v~~~a~~~l~------~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~ 294 (467)
T TIGR01804 221 GVPTGKKIMAAAADHLK------HVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEA 294 (467)
T ss_pred cHHHHHHHHHHHHhcCC------cEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHH
Confidence 99999999999998888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCc
Q psy1960 364 FLLLFLFSASV 374 (428)
Q Consensus 364 ~L~~~l~~l~v 374 (428)
+|+++++++++
T Consensus 295 ~l~~~~~~~~~ 305 (467)
T TIGR01804 295 RLVERTKRIKL 305 (467)
T ss_pred HHHHHHHhCCC
Confidence 99999998753
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-54 Score=454.14 Aligned_cols=286 Identities=24% Similarity=0.308 Sum_probs=255.3
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhh
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEV 136 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~ 136 (428)
.++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++ .|+++|.++|.
T Consensus 6 ~~~~~I~g~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~---- 72 (481)
T cd07141 6 YTKIFINNEWHDSVSGKTFP--------TINPAT-GEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERG---- 72 (481)
T ss_pred cccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHH----
Confidence 45689999998754333222 789998 89999999999999 99999999 997 69999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...++|||..+... +.+++++.. +....+.++.|
T Consensus 73 ---~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 145 (481)
T cd07141 73 ---RLLNKL-ADL--IERDRA-YLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEP 145 (481)
T ss_pred ---HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEec
Confidence 999999 999 998887 6777788999999853321 234444321 11224567788
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||++
T Consensus 146 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v 225 (481)
T cd07141 146 VGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDI 225 (481)
T ss_pred eeEEEEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCC
Confidence 99999999999999999999999998 99999999999999999999999999999999999999887889999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
++|+||||+++|+.|++.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||+
T Consensus 226 d~V~ftGs~~~g~~i~~~aa~~~~~------~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~ 299 (481)
T cd07141 226 DKVAFTGSTEVGKLIQQAAGKSNLK------RVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQE 299 (481)
T ss_pred CEEEEECcHHHHHHHHHHhhhhcCc------eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcH
Confidence 999999999999999998886 777 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCC
Q psy1960 356 SLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|+++|++++++++
T Consensus 300 ~i~d~f~~~l~~~~~~~~ 317 (481)
T cd07141 300 SIYDEFVKRSVERAKKRV 317 (481)
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 999999999999999866
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-54 Score=455.90 Aligned_cols=303 Identities=25% Similarity=0.325 Sum_probs=266.7
Q ss_pred HHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc
Q psy1960 46 REAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP 122 (428)
Q Consensus 46 r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~ 122 (428)
|..++.+|+.++.. +..+| +|+|+|..+..+.. ++||.++++++++++.++.++ ++|+++|+ |++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~p-~i~g~~~~~~~~~~----------v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~ 84 (518)
T cd07125 16 LEALADALKAFDEKEWEAIP-IINGEETETGEGAP----------VIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG 84 (518)
T ss_pred HHHHHHHHHHhhhcCcccCc-eECCEEeeCCCeEE----------EECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 66778888888765 34444 78889885555444 889998689999999999999 99999999 9999
Q ss_pred cccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc----------
Q psy1960 123 YEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV---------- 186 (428)
Q Consensus 123 W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~---------- 186 (428)
|+.++.++|. ++|+++ +++ |+++.+ ....+...++|||+.+++.+ .++++...
T Consensus 85 w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~ 153 (518)
T cd07125 85 WSATPVEERA-------EILEKA-ADL--LEANRG-ELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPEL 153 (518)
T ss_pred HhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 9999999999 999999 999 999988 77778889999998765432 34444320
Q ss_pred ---ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCC
Q psy1960 187 ---LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD 262 (428)
Q Consensus 187 ---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~ 262 (428)
.+.....++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|+
T Consensus 154 ~~~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~ 233 (518)
T cd07125 154 PGPTGELNGLELHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGD 233 (518)
T ss_pred cCCCCceeEEEEecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecC
Confidence 1123456678899999999999999999999999998 999999999999999999999999999999999999998
Q ss_pred ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCC
Q psy1960 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCG 342 (428)
Q Consensus 263 g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~G 342 (428)
+.++++.|+.|+++++|+||||+++|+.|.+.++++.+ .++|+++|+|||||+||++|||+|.|++.+++++|.|+|
T Consensus 234 ~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~---~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsG 310 (518)
T cd07125 234 GEEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG---PILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAG 310 (518)
T ss_pred chhhHHHHhcCCCcCEEEEECCHHHHHHHHHHhhhccC---CCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 87789999999999999999999999999999886521 123999999999999999999999999999999999999
Q ss_pred CccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 343 QKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 343 Q~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++++|+|||++++|+|+++|++++++++
T Consensus 311 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 341 (518)
T cd07125 311 QRCSALRLLYLQEEIAERFIEMLKGAMASLK 341 (518)
T ss_pred CCCCCCeEEEEcchhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999865
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-54 Score=454.38 Aligned_cols=283 Identities=21% Similarity=0.224 Sum_probs=253.5
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
++++|||+|+.+.+...++ ++||.+ ++++++++.++.+| ++|+++|+ |++.|+.+|.++|. +
T Consensus 1 ~~~~i~g~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~ 64 (479)
T cd07116 1 YDNFIGGEWVAPVKGEYFD--------NITPVT-GKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA-------N 64 (479)
T ss_pred CCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------H
Confidence 3579999999765433333 789999 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||+.+++. +.+++++.. .+...+.++.|+|||
T Consensus 65 ~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 140 (479)
T cd07116 65 ILNKI-ADR--MEANLE-MLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVV 140 (479)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceE
Confidence 99999 999 999988 7777788899999876643 245555431 112345678889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++ +|+|++|+++|++.++++.|+.||++++|+
T Consensus 141 ~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~ 219 (479)
T cd07116 141 GQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVA 219 (479)
T ss_pred EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEE
Confidence 9999999999999999999999 99999999999999999999999998 999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCC------CCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHAS------ANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~d------ADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
||||+++|+.|.+.++++++ |+++|+|||||+||++| ||+|.|++.++++. .|+||.|++++|+|||
T Consensus 220 fTGS~~~G~~i~~~aa~~~~------p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~ 292 (479)
T cd07116 220 FTGETTTGRLIMQYASENII------PVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQ 292 (479)
T ss_pred EECCHHHHHHHHHHHHcCCC------eEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEc
Confidence 99999999999999998887 89999999999999988 79999999999865 5899999999999999
Q ss_pred CCchHHHHHHHHHHHhcCC
Q psy1960 355 ESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~ 373 (428)
++++|+|+++|++++++++
T Consensus 293 ~~i~d~f~~~l~~~~~~l~ 311 (479)
T cd07116 293 ESIYDRFMERALERVKAIK 311 (479)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999865
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-54 Score=453.49 Aligned_cols=279 Identities=20% Similarity=0.221 Sum_probs=249.5
Q ss_pred EEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHH
Q psy1960 66 VIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYF 143 (428)
Q Consensus 66 ~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~ 143 (428)
+|||+|+.+..... ++||.| ++++++++.++.++ ++|+++|+ |++.|+++|.++|. ++|+
T Consensus 2 ~i~g~~~~~~~~~~----------~~~P~t-~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~-------~~L~ 63 (474)
T cd07130 2 VYDGEWGGGGGVVT----------SISPAN-GEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRG-------EIVR 63 (474)
T ss_pred eECCEEecCCCeEE----------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHH
Confidence 69999998654433 789998 89999999999999 99999999 99999999999999 9999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceEEEE
Q psy1960 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 144 ~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV~~I 204 (428)
++ +++ |+++.+ ....+...++|||+.+++. +.++|+... .....+..+.|+|||++|
T Consensus 64 ~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I 139 (474)
T cd07130 64 QI-GDA--LRKKKE-ALGKLVSLEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVI 139 (474)
T ss_pred HH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEE
Confidence 99 999 999988 7777788999999876543 233444321 112235567889999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH----HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEE
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGI 279 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I 279 (428)
+|||||+...++++++||+ ||+||+|||+.+|+++..+++++ .++|+|+|++|+++|++ +.++.|+.||+|++|
T Consensus 140 ~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~-~~~~~L~~~~~vd~V 218 (474)
T cd07130 140 TAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGA-DVGEALVKDPRVPLV 218 (474)
T ss_pred ccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCh-hHHHHHhcCCCCCEE
Confidence 9999999999999999998 99999999999999999887764 69999999999999954 579999999999999
Q ss_pred EeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH
Q psy1960 280 NFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC 359 (428)
Q Consensus 280 ~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d 359 (428)
+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|
T Consensus 219 ~fTGs~~~g~~i~~~aa~~~~------~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d 292 (474)
T cd07130 219 SFTGSTAVGRQVGQAVAARFG------RSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYD 292 (474)
T ss_pred EEECchHHHHHHHHHHHhcCC------CEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHH
Confidence 999999999999999999888 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCC
Q psy1960 360 FCSCFLLLFLFSAS 373 (428)
Q Consensus 360 ~f~~~L~~~l~~l~ 373 (428)
+|+++|++++++++
T Consensus 293 ~f~~~l~~~~~~l~ 306 (474)
T cd07130 293 EVLERLKKAYKQVR 306 (474)
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999865
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-54 Score=453.16 Aligned_cols=284 Identities=20% Similarity=0.309 Sum_probs=255.6
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+. .++ ++||++ ++++++++.++.++ ++++++|+ +++.|+.++.++|. +
T Consensus 3 ~~~~i~g~~~~~~~~-~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~ 65 (475)
T PRK13473 3 TKLLINGELVAGEGE-KQP--------VYNPAT-GEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERA-------E 65 (475)
T ss_pred ccceECCEEecCCCC-EEe--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------H
Confidence 468999999875322 222 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-------------ccccceeeecccce
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDGF 200 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~GV 200 (428)
+|+++ +++ |+++++ ....+...++|||..+++. +.+++++.. .....+.++.|+||
T Consensus 66 ~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GV 141 (475)
T PRK13473 66 ALLKL-ADA--IEENAD-EFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGV 141 (475)
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEeccee
Confidence 99999 999 999988 7777788999999865532 234554321 11234567889999
Q ss_pred EEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEE
Q psy1960 201 VAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGI 279 (428)
Q Consensus 201 V~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I 279 (428)
|++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+.+++.++ +|+|++|+++|++.++++.|+.||++++|
T Consensus 142 v~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V 220 (475)
T PRK13473 142 VASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMV 220 (475)
T ss_pred EEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEE
Confidence 99999999999999999999998 99999999999999999999999999 99999999999888899999999999999
Q ss_pred EeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH
Q psy1960 280 NFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC 359 (428)
Q Consensus 280 ~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d 359 (428)
+||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|
T Consensus 221 ~fTGs~~~g~~i~~~aa~~~~------~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d 294 (475)
T PRK13473 221 SLTGSIATGKHVLSAAADSVK------RTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYD 294 (475)
T ss_pred EEECcHHHHHHHHHHHhhcCC------cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHH
Confidence 999999999999999998887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCc
Q psy1960 360 FCSCFLLLFLFSASV 374 (428)
Q Consensus 360 ~f~~~L~~~l~~l~v 374 (428)
+|+++|+++++++++
T Consensus 295 ~f~~~l~~~~~~l~~ 309 (475)
T PRK13473 295 DLVAKLAAAVATLKV 309 (475)
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999998753
|
|
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-54 Score=454.35 Aligned_cols=283 Identities=23% Similarity=0.307 Sum_probs=254.6
Q ss_pred EEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhHHHH
Q psy1960 66 VIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 66 ~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~~~i 141 (428)
+|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++ .|+.+|..+|. ++
T Consensus 1 ~i~g~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~-------~~ 64 (482)
T cd07119 1 YIDGEWVEAASGKTRD--------IINPAN-GEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERA-------AL 64 (482)
T ss_pred CCCCEEecCCCCCeEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHH-------HH
Confidence 5899998754332222 789998 89999999999999 99999999 986 59999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+...++|||..+++.| .+++++.. .......++.|+|||++
T Consensus 65 L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~ 140 (482)
T cd07119 65 LFRI-ADK--IREDAE-ELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGL 140 (482)
T ss_pred HHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeEEE
Confidence 9999 999 999988 77777889999998766543 34444321 11234677888999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|+||
T Consensus 141 I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fT 220 (482)
T cd07119 141 ITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVSFT 220 (482)
T ss_pred EcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999887789999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCS 362 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~ 362 (428)
||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||++++|+|+
T Consensus 221 Gs~~~g~~i~~~aa~~~~------~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~ 294 (482)
T cd07119 221 GGTATGRSIMRAAAGNVK------KVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFV 294 (482)
T ss_pred CcHHHHHHHHHHHHhcCC------cEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHH
Confidence 999999999999998888 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCc
Q psy1960 363 CFLLLFLFSASV 374 (428)
Q Consensus 363 ~~L~~~l~~l~v 374 (428)
++|+++++++++
T Consensus 295 ~~l~~~~~~~~~ 306 (482)
T cd07119 295 AALAERAKKIKL 306 (482)
T ss_pred HHHHHHHHhcCC
Confidence 999999998763
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-54 Score=453.00 Aligned_cols=287 Identities=23% Similarity=0.255 Sum_probs=257.0
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEV 136 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~ 136 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|..+|+
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~--------~~nP~t-g~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~---- 84 (494)
T PRK09847 18 IENRLFINGEYTAAAENETFE--------TVDPVT-QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRK---- 84 (494)
T ss_pred cccCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHH----
Confidence 456789999998764333223 789998 89999999999999 99999999 997 59999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...++|||+.++.. +.++|++.. .....+.++.|
T Consensus 85 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 157 (494)
T PRK09847 85 ---AVLNKL-ADL--MEAHAE-ELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREP 157 (494)
T ss_pred ---HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecc
Confidence 999999 999 999988 7777788999999865432 345555431 11123677889
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+.++.|+.||++
T Consensus 158 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~v 237 (494)
T PRK09847 158 VGVIAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDI 237 (494)
T ss_pred eeEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCC
Confidence 99999999999999999999999998 99999999999999999999999999999999999999888889999999999
Q ss_pred eEEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCC-CHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 277 AGINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASA-NVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dA-Dld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
+.|+||||+++|+.|.+.++ ++++ |+++|+|||||+||.+|+ |+|.|++.+++++|.|+||.|++++|+|||
T Consensus 238 d~v~fTGs~~~g~~v~~~aa~~~~~------~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~ 311 (494)
T PRK09847 238 DAIAFTGSTRTGKQLLKDAGDSNMK------RVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLE 311 (494)
T ss_pred CEEEEECCHHHHHHHHHHhhhhCCC------eEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEc
Confidence 99999999999999999888 4666 899999999999999997 999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCC
Q psy1960 355 ESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~ 373 (428)
++++|+|+++|++++++++
T Consensus 312 ~~i~d~f~~~l~~~~~~~~ 330 (494)
T PRK09847 312 ESIADEFLALLKQQAQNWQ 330 (494)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999865
|
|
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-54 Score=452.41 Aligned_cols=287 Identities=23% Similarity=0.304 Sum_probs=255.1
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc-cccCChhhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP-YEKNSVGLLINTEVL 137 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~-W~~~~~~~R~~~~~~ 137 (428)
...+.+|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++. |+.+|.++|.
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~----- 71 (484)
T cd07144 6 QPTGLFINNEFVKSSDGETIK--------TVNPST-GEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERG----- 71 (484)
T ss_pred cCcCcEECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHH-----
Confidence 345789999999864333223 789998 89999999999999 99999999 9986 8899999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+.. . +.+++++.. .....+..+.|+
T Consensus 72 --~iL~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~ 145 (484)
T cd07144 72 --ELLDKL-ADL--VEKNRD-LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPY 145 (484)
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecc
Confidence 999999 999 999887 677778889999975431 1 244554421 012235667889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++
T Consensus 146 GvV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd 225 (484)
T cd07144 146 GVCGQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVD 225 (484)
T ss_pred eEEEEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++
T Consensus 226 ~V~fTGS~~~g~~i~~~a~~~~~------~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i 299 (484)
T cd07144 226 KIAFTGSTATGRLVMKAAAQNLK------AVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESI 299 (484)
T ss_pred EEEEECcHHHHHHHHHHHHhcCC------eEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHH
Confidence 99999999999999999998887 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhc-CC
Q psy1960 358 FCFCSCFLLLFLFS-AS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~-l~ 373 (428)
+|+|+++|++++++ ++
T Consensus 300 ~d~f~~~l~~~~~~~~~ 316 (484)
T cd07144 300 YDKFVEKFVEHVKQNYK 316 (484)
T ss_pred HHHHHHHHHHHHHhhCC
Confidence 99999999999985 54
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-54 Score=453.60 Aligned_cols=282 Identities=23% Similarity=0.295 Sum_probs=253.9
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
.+|||+|+.+. ...++ ++||+| ++++++++.++.++ ++++++|+ |++.|+++|.++|. ++|
T Consensus 1 ~~i~g~~~~~~-~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L 63 (478)
T cd07086 1 GVIGGEWVGSG-GETFT--------SRNPAN-GEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRG-------EIV 63 (478)
T ss_pred CcCCCEEecCC-CCEEe--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHH
Confidence 37999999875 22222 789998 89999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceEEE
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV~~ 203 (428)
+++ +++ |+++.+ ....+...++|||+.+++. +.++|++.. .....+.++.|+|||++
T Consensus 64 ~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~ 139 (478)
T cd07086 64 RQI-GEA--LRKKKE-ALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGV 139 (478)
T ss_pred HHH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEE
Confidence 999 999 999988 7777788999999876554 234554421 11234567788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++ |+|+|++|+++|++. +++.|..||+++.
T Consensus 140 I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~-~~~~L~~~~~vd~ 218 (478)
T cd07086 140 ITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGD-GGELLVHDPRVPL 218 (478)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCch-hHHHHhcCCCCCE
Confidence 99999999999999999998 99999999999999999999999999 999999999999765 8999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 219 v~fTGs~~~g~~i~~~aa~~~~------~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~ 292 (478)
T cd07086 219 VSFTGSTEVGRRVGETVARRFG------RVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY 292 (478)
T ss_pred EEEECcHHHHHHHHHHHhccCC------cEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH
Confidence 9999999999999999998887 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCc
Q psy1960 359 CFCSCFLLLFLFSASV 374 (428)
Q Consensus 359 d~f~~~L~~~l~~l~v 374 (428)
|+|+++|+++++++++
T Consensus 293 d~f~~~l~~~~~~~~~ 308 (478)
T cd07086 293 DEFLERLVKAYKQVRI 308 (478)
T ss_pred HHHHHHHHHHHHhCCc
Confidence 9999999999998763
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-54 Score=449.97 Aligned_cols=286 Identities=23% Similarity=0.253 Sum_probs=254.7
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccc--cCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYE--KNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~--~~~~~~R~~~~~~~ 138 (428)
.++||||+|+.+.+...++ ++||++ ++++++++.++.++ +.++++|+ |++.|+ .+|.++|.
T Consensus 4 ~~~~I~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~------ 68 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFP--------TINPAT-EEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERG------ 68 (476)
T ss_pred ccceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHH------
Confidence 4689999998754333223 789998 89999999999999 99999999 999854 99999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...++|||..+... +.+++++.. .+...+.++.|+|
T Consensus 69 -~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G 143 (476)
T cd07091 69 -RLLNKL-ADL--IERDRD-ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIG 143 (476)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecee
Confidence 999999 999 999888 7777788999999744321 234444321 1122356778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+...+++++|||+ ||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|++.++++.|+.||++++
T Consensus 144 Vv~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~ 223 (476)
T cd07091 144 VCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDK 223 (476)
T ss_pred EEEEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999988889999999999999
Q ss_pred EEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+++|+.|.+.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++
T Consensus 224 V~fTGs~~~g~~v~~~aa~~~~~------~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v 297 (476)
T cd07091 224 IAFTGSTAVGRTIMEAAAKSNLK------KVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESI 297 (476)
T ss_pred EEEECcHHHHHHHHHHHHhcCCc------eEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHH
Confidence 9999999999999999987 666 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 298 ~~~f~~~L~~~~~~~~~ 314 (476)
T cd07091 298 YDEFVEKFKARAEKRVV 314 (476)
T ss_pred HHHHHHHHHHHHhhCCC
Confidence 99999999999998764
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-54 Score=449.04 Aligned_cols=266 Identities=17% Similarity=0.223 Sum_probs=243.0
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||++ ++++++++.++.++ ++|+++|+ +|+.|++++.++|+ ++|+++ +++ |+++.+ ....+...+
T Consensus 11 ~~nP~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 78 (462)
T PRK13968 11 SVNPAT-GEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRA-------QKLRDI-GKA--LRARSE-EMAQMITRE 78 (462)
T ss_pred eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHH
Confidence 789998 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccc------hhhhhhhccc------------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRM------SALTFYLEVL------------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~------~~l~~~~~~~------------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
.|||..+++. +.++|++... ....+.++.|+|||++|+|||||+....++++|||+ ||+||
T Consensus 79 ~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv 158 (462)
T PRK13968 79 MGKPINQARAEVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYL 158 (462)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9999876654 2455554320 112356678899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.+++.++|+|+|++|+++|++.+ +..++.||++++|+||||+++|+.|++.++++++ |+
T Consensus 159 ~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~-~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~------~~ 231 (462)
T PRK13968 159 LKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDG-VSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALK------KC 231 (462)
T ss_pred EECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchh-hHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCC------cE
Confidence 9999999999999999999999999999999987654 4568899999999999999999999999998887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 232 ~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 297 (462)
T PRK13968 232 VLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKM 297 (462)
T ss_pred EEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999999999999999999999999999998763
|
|
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-53 Score=448.99 Aligned_cols=283 Identities=23% Similarity=0.250 Sum_probs=249.8
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
++|+|+|+.+.+. .++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+.+|.++|. ++|
T Consensus 1 ~~i~g~~~~~~~~-~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L 63 (484)
T TIGR03240 1 LFIDGKWRAGQGE-SFS--------STNPAT-QEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERI-------AVV 63 (484)
T ss_pred CeECCEEecCCCC-EEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHH-------HHH
Confidence 4799999875332 222 789999 89999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc----c--------ccccceeeecccceEEEE
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE----V--------LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~----~--------~~~~~~~~~~p~GVV~~I 204 (428)
+++ +++ |+++.+ ....+...+.|||..+++.+ .++++.. . .....+..+.|+|||++|
T Consensus 64 ~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I 139 (484)
T TIGR03240 64 QRF-AAL--LEERKE-ALARVIARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVVAVF 139 (484)
T ss_pred HHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEEEEE
Confidence 999 999 999988 77777889999998765532 2333221 0 112234557789999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeC
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTG 283 (428)
+|||||+...++++++||+ ||+||+|||+.+|+++..+.++++++|+|+|++|+++| +.++++.|+.||++++|+|||
T Consensus 140 ~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g-~~~~~~~L~~~~~vd~V~fTG 218 (484)
T TIGR03240 140 GPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG-ARETGVALAAHPDIDGLLFTG 218 (484)
T ss_pred CCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC-CHHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999998 99999999999999999999999999999999999999 567899999999999999999
Q ss_pred ChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch-HHHH
Q psy1960 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF-CFCS 362 (428)
Q Consensus 284 S~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~-d~f~ 362 (428)
|+++|+.|++.++++.. +++++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++ |+|+
T Consensus 219 S~~~G~~i~~~aa~~~~-----~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~ 293 (484)
T TIGR03240 219 SSNTGHLLHRQFAGRPE-----KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFL 293 (484)
T ss_pred CHHHHHHHHHHhhhcCC-----CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHH
Confidence 99999999998876533 27999999999999999999999999999999999999999999999999985 9999
Q ss_pred HHHHHHHhcCCc
Q psy1960 363 CFLLLFLFSASV 374 (428)
Q Consensus 363 ~~L~~~l~~l~v 374 (428)
++|+++++++++
T Consensus 294 ~~l~~~~~~~~~ 305 (484)
T TIGR03240 294 ARLVEVAERLTV 305 (484)
T ss_pred HHHHHHHHhccc
Confidence 999999998765
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-54 Score=449.60 Aligned_cols=285 Identities=23% Similarity=0.309 Sum_probs=255.5
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
++|||+|+.+.....++ ++||+++++++++++.++.++ ++++++|+ |++.|+.++.++|. ++|
T Consensus 1 ~~i~g~~~~~~~~~~~~--------~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~-------~~l 65 (478)
T cd07131 1 NYIGGEWVDSASGETFD--------SRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRA-------EYL 65 (478)
T ss_pred CcCCCEeecCCCCCeEE--------EECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHH
Confidence 37999998754322222 789998668999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEEE
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~~ 203 (428)
+++ +++ |+++.+ ....+...++|||..+++.+ .++++... .+...+.++.|+|||++
T Consensus 66 ~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 141 (478)
T cd07131 66 FRA-AEL--LKKRKE-ELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVAL 141 (478)
T ss_pred HHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEE
Confidence 999 999 999888 66677788999998766542 34444431 01134567788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||++++|+||
T Consensus 142 I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ft 221 (478)
T cd07131 142 ITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFT 221 (478)
T ss_pred ECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999887789999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCS 362 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~ 362 (428)
||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 222 Gs~~~g~~i~~~aa~~~~------~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~ 295 (478)
T cd07131 222 GSTEVGERIGETCARPNK------RVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFL 295 (478)
T ss_pred CcHHHHHHHHHHHhhcCC------cEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHH
Confidence 999999999999998887 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCc
Q psy1960 363 CFLLLFLFSASV 374 (428)
Q Consensus 363 ~~L~~~l~~l~v 374 (428)
++|+++++++++
T Consensus 296 ~~l~~~~~~~~~ 307 (478)
T cd07131 296 KRFVERAKRLRV 307 (478)
T ss_pred HHHHHHHHhcCC
Confidence 999999998763
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-54 Score=448.48 Aligned_cols=283 Identities=23% Similarity=0.269 Sum_probs=255.1
Q ss_pred EEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHH
Q psy1960 66 VIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYF 143 (428)
Q Consensus 66 ~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~ 143 (428)
+|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+.+|.++|. ++|+
T Consensus 1 ~i~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~ 64 (468)
T cd07088 1 YINGEFVPSSSGETID--------VLNPAT-GEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA-------AYLR 64 (468)
T ss_pred CCCCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHH
Confidence 5899998754333223 789998 89999999999999 99999999 99999999999999 9999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc----------c---ccccceeeecccceEEEE
Q psy1960 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE----------V---LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 144 ~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~----------~---~~~~~~~~~~p~GVV~~I 204 (428)
++ +++ |+++.+ ....+...++|||..+++.+ .+++++. + .+...+.++.|+|||++|
T Consensus 65 ~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I 140 (468)
T cd07088 65 KL-ADL--IRENAD-ELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGI 140 (468)
T ss_pred HH-HHH--HHHhHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEE
Confidence 99 999 999887 77777889999998766542 3444432 0 122345677889999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeC
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTG 283 (428)
+|||||+...++++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.||++++|.|||
T Consensus 141 ~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftG 220 (468)
T cd07088 141 LPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTG 220 (468)
T ss_pred ccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEEC
Confidence 9999999999999999998 999999999999999999999999999999999999998878899999999999999999
Q ss_pred ChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHH
Q psy1960 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSC 363 (428)
Q Consensus 284 S~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~ 363 (428)
|+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++
T Consensus 221 s~~~g~~i~~~aa~~~~------~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~ 294 (468)
T cd07088 221 STEAGQKIMEAAAENIT------KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFME 294 (468)
T ss_pred cHHHHHHHHHHHHhcCC------cEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHH
Confidence 99999999999999888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCc
Q psy1960 364 FLLLFLFSASV 374 (428)
Q Consensus 364 ~L~~~l~~l~v 374 (428)
+|+++++++++
T Consensus 295 ~l~~~~~~~~~ 305 (468)
T cd07088 295 KLVEKMKAVKV 305 (468)
T ss_pred HHHHHHHhcCC
Confidence 99999998764
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-53 Score=447.11 Aligned_cols=283 Identities=18% Similarity=0.201 Sum_probs=253.4
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
+++|||+|+.+.+...++ ++||.| ++++++++.++.++ ++++++|+ |++.|+++|.++|. ++
T Consensus 2 ~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~-------~~ 65 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIP--------VTNPAT-NEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT-------SV 65 (477)
T ss_pred ceeECCEEecCCCCCeEe--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HH
Confidence 579999998764333333 789998 79999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ |+++.+ ....+...++|||+.+++.+ .+++++.. .....+.++.|+|||+
T Consensus 66 L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~ 141 (477)
T TIGR01722 66 LLRY-QAL--LKEHRD-EIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCA 141 (477)
T ss_pred HHHH-HHH--HHHHHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEE
Confidence 9999 999 998887 77777889999998776542 33444320 1123456788999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+...++++++||+ ||+||+|||+.+|+++..+.++++++|+|+|++|+++|+ .+.++.|+.||+|+.|+|
T Consensus 142 ~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~-~~~~~~L~~~~~v~~V~f 220 (477)
T TIGR01722 142 GITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGD-KEAVDRLLEHPDVKAVSF 220 (477)
T ss_pred EEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCC-HHHHHHHHcCCCcCEEEE
Confidence 999999999999999999998 999999999999999999999999999999999999985 456899999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHH
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFC 361 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f 361 (428)
|||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ |+|
T Consensus 221 tGS~~~g~~v~~~a~~~~~------~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f 293 (477)
T TIGR01722 221 VGSTPIGRYIHTTGSAHGK------RVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEW 293 (477)
T ss_pred ECCHHHHHHHHHHHHhcCC------eEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHH
Confidence 9999999999999988877 899999999999999999999999999999999999999999999999998 999
Q ss_pred HHHHHHHHhcCCc
Q psy1960 362 SCFLLLFLFSASV 374 (428)
Q Consensus 362 ~~~L~~~l~~l~v 374 (428)
+++|+++++++++
T Consensus 294 ~~~l~~~~~~~~~ 306 (477)
T TIGR01722 294 VPEIRERAEKIRI 306 (477)
T ss_pred HHHHHHHHhcCCC
Confidence 9999999988763
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-53 Score=446.25 Aligned_cols=283 Identities=24% Similarity=0.317 Sum_probs=252.9
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc--cccCChhhhhhhhhhHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP--YEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~--W~~~~~~~R~~~~~~~~~ 140 (428)
++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++. |+.+|.++|. +
T Consensus 1 ~~i~g~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~-------~ 64 (471)
T cd07139 1 LFIGGRWVAPSGSETID--------VVSPAT-EEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERA-------A 64 (471)
T ss_pred CeECCEeecCCCCCeEE--------eECCCC-CCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHH-------H
Confidence 47999998764332222 789998 89999999999999 99999999 9984 9999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-------------ccccceeeecccce
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDGF 200 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~GV 200 (428)
+|+++ +++ |+++.+ ....+...++|||..++.. +.+++++.. .+...+.++.|+||
T Consensus 65 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 140 (471)
T cd07139 65 VLRRL-ADA--LEARAD-ELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGV 140 (471)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccE
Confidence 99999 999 999988 7777788999999754432 234455321 11224567788999
Q ss_pred EEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEE
Q psy1960 201 VAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGI 279 (428)
Q Consensus 201 V~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I 279 (428)
|++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.++.|+.|++++.|
T Consensus 141 v~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~~~~~~l~~~~~i~~v 219 (471)
T cd07139 141 VAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA-DREVGEYLVRHPGVDKV 219 (471)
T ss_pred EEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC-CHHHHHHHhcCCCCCEE
Confidence 99999999999999999999999 99999999999999999999999999999999999998 45689999999999999
Q ss_pred EeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH
Q psy1960 280 NFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC 359 (428)
Q Consensus 280 ~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d 359 (428)
+||||+.+|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|
T Consensus 220 ~ftGs~~~g~~v~~~~~~~~~------~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d 293 (471)
T cd07139 220 SFTGSTAAGRRIAAVCGERLA------RVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYD 293 (471)
T ss_pred EEECcHHHHHHHHHHHHhcCC------EEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHH
Confidence 999999999999999998887 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCc
Q psy1960 360 FCSCFLLLFLFSASV 374 (428)
Q Consensus 360 ~f~~~L~~~l~~l~v 374 (428)
+|+++|+++++++++
T Consensus 294 ~f~~~l~~~~~~~~~ 308 (471)
T cd07139 294 EVVEALAAAVAALKV 308 (471)
T ss_pred HHHHHHHHHHHhCCc
Confidence 999999999998753
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=446.02 Aligned_cols=277 Identities=18% Similarity=0.098 Sum_probs=246.1
Q ss_pred EEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCcc--ccCChhhh----hhhhhh
Q psy1960 66 VIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPY--EKNSVGLL----INTEVL 137 (428)
Q Consensus 66 ~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W--~~~~~~~R----~~~~~~ 137 (428)
+|||+|+.+.+... ++||.+ ++++++++.++.++ ++|+++|+ ||+.| +.++..+| .
T Consensus 2 ~i~g~~~~~~~~~~----------~~nP~t-~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~----- 65 (489)
T cd07126 2 LVAGKWKGASNYTT----------LLDPLN-GDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYG----- 65 (489)
T ss_pred cCCCEEecCCCcEE----------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHH-----
Confidence 68999988755444 789998 89999999999999 99999999 99988 55778899 8
Q ss_pred HHHHHHHHHHHHHHHhhcc--chhHHHHHHHhcCCCCCcccc------hhhhhhhccc---------------cccceee
Q psy1960 138 HDDLYFRCLDDLKYAAGNY--YINDKSTGSVVGQQPFGGGRM------SALTFYLEVL---------------ASNLGRG 194 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~--~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~~---------------~~~~~~~ 194 (428)
++|+++ +++ |+++. + ....+.+.++|||+.+++. +.++|++... ....+.+
T Consensus 66 --~il~~~-a~~--l~~~~~~~-~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~ 139 (489)
T cd07126 66 --DVSHRV-AHE--LRKPEVED-FFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGY 139 (489)
T ss_pred --HHHHHH-HHH--HHcCCCHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEE
Confidence 999999 999 99874 5 5667788999999877664 3456665310 1134677
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
++|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+ +..++.|
T Consensus 140 r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~~~~-~~~l~~~ 218 (489)
T cd07126 140 RWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSDGPT-MNKILLE 218 (489)
T ss_pred EecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCCchh-HHHHhcC
Confidence 88999999999999999999999999998 999999999999999999999999999999999999997765 5568889
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCC-CHHHHHHHHHHHHhhcCCCccccCceEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASA-NVESVVNGTIRSAFEYCGQKCSACSRMY 352 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dA-Dld~Aa~~iv~saf~~~GQ~C~a~srv~ 352 (428)
+++++|+||||+++|+.|...++. ++++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+|
T Consensus 219 ~~v~~V~FTGS~~vGr~i~~~~g~---------k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~ 289 (489)
T cd07126 219 ANPRMTLFTGSSKVAERLALELHG---------KVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILF 289 (489)
T ss_pred CCCCEEEEECCHHHHHHHHHHhCC---------CEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEE
Confidence 999999999999999999887762 689999999999999999 9999999999999999999999999999
Q ss_pred EeCCc-hHHHHHHHHHHHhcCCc
Q psy1960 353 VPESL-FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 353 V~~si-~d~f~~~L~~~l~~l~v 374 (428)
||+++ +|+|+++|++.++++++
T Consensus 290 V~~~i~~d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 290 AHENWVQAGILDKLKALAEQRKL 312 (489)
T ss_pred EeCcchHHHHHHHHHHHHHhccc
Confidence 99995 68999999999998875
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-53 Score=446.30 Aligned_cols=267 Identities=20% Similarity=0.209 Sum_probs=244.7
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||++ ++++++++.++.++ ++|+++|+ |++.|++++..+|. ++|+++ +++ |+++.+ ....+...+
T Consensus 14 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 81 (465)
T cd07151 14 VLNPYT-GETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERA-------EILEKA-AQI--LEERRD-EIVEWLIRE 81 (465)
T ss_pred eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 789998 79999999999999 99999999 99999999999999 999999 999 999887 777778899
Q ss_pred cCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
+||+..++..+ .+++++.. .+.....++.|+|||++|+|||||+...+++++|||+ ||+|
T Consensus 82 ~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~V 161 (465)
T cd07151 82 SGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAV 161 (465)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEE
Confidence 99998665432 34444321 1223456788899999999999999999999999998 9999
Q ss_pred EEeCCccchHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCC
Q psy1960 228 LWKPSDTALLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306 (428)
Q Consensus 228 VlKPs~~apl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~ 306 (428)
|+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.++++.|+.||.+++|.||||+++|+.|++.++++++
T Consensus 162 i~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~------ 235 (465)
T cd07151 162 VLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLK------ 235 (465)
T ss_pred EEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------
Confidence 999999999996 7999999999999999999999888899999999999999999999999999999999887
Q ss_pred cEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 307 ~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 236 ~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 303 (465)
T cd07151 236 KVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPY 303 (465)
T ss_pred cEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999998864
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-53 Score=443.84 Aligned_cols=266 Identities=19% Similarity=0.206 Sum_probs=243.4
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++++ ....+...+
T Consensus 5 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 72 (457)
T PRK09406 5 TINPAT-GETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRA-------RWANAA-ADL--LEAEAD-QVAALMTLE 72 (457)
T ss_pred eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHh
Confidence 679998 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccch------hhhhhhcc---------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CC
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV---------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GS 225 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~---------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN 225 (428)
+|||+.+++.+ .++|++.. +....+..+.|+|||++|+|||||+...++++++||+ ||
T Consensus 73 ~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN 152 (457)
T PRK09406 73 MGKTLASAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGN 152 (457)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCC
Confidence 99998776542 34554321 1123356678899999999999999999999999999 99
Q ss_pred EEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCC
Q psy1960 226 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNF 305 (428)
Q Consensus 226 ~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~ 305 (428)
+||+|||+.+|+++..+.+++.++|+|+|++|+++++ .+.+..|+.||++++|+||||+++|+.|.+.++++++
T Consensus 153 ~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~g-~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~----- 226 (457)
T PRK09406 153 VGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVG-SGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIK----- 226 (457)
T ss_pred EEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcCC-chhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCC-----
Confidence 9999999999999999999999999999999999863 4568889999999999999999999999999998888
Q ss_pred CcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 306 PRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 306 ~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 227 -~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~ 294 (457)
T PRK09406 227 -KTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRV 294 (457)
T ss_pred -ceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhhCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999764
|
|
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-53 Score=446.98 Aligned_cols=278 Identities=17% Similarity=0.118 Sum_probs=242.1
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-c-cCccccCChhhhhhhhhhHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-S-LCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A-~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.++|||+|+.+.+. .++ ++||.+ ++++++++.++ +| ++||++|+ | |+.|+.+|..+|+ +
T Consensus 2 ~~~I~g~~~~~~~~-~~~--------~~nP~t-g~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra-------~ 63 (513)
T cd07128 2 QSYVAGQWHAGTGD-GRT--------LHDAVT-GEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERA-------A 63 (513)
T ss_pred ceeECCEEEcCCCC-EEE--------eECCCC-CCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHH-------H
Confidence 47899999986432 222 789998 89999999876 78 99999999 8 7999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------cc-------c--cce
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LA-------S--NLG 192 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~-------~--~~~ 192 (428)
+|+++ +++ |+++++ ....+ ..++|||+.+++. +.++||+.. ++ . ..+
T Consensus 64 ~L~~~-a~~--l~~~~~-~la~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (513)
T cd07128 64 MLKAL-AKY--LMERKE-DLYAL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQ 138 (513)
T ss_pred HHHHH-HHH--HHHHHH-HHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccce
Confidence 99999 999 999988 55554 7899999877654 345665431 00 1 124
Q ss_pred eeecc-cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhhhh
Q psy1960 193 RGEGL-DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDT 269 (428)
Q Consensus 193 ~~~~p-~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g~~ 269 (428)
..+.| +|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++| +|+|++|+++|++.++++.
T Consensus 139 ~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~~ 218 (513)
T cd07128 139 HILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLDH 218 (513)
T ss_pred EEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhcc
Confidence 45678 59999999999999999999999998 999999999999999999999999999 9999999999976555554
Q ss_pred hhcCCCeeEEEeeCChhhHHHHHHHH--hcccCcccCCCcEEEecCCCceeEEcCCCC-----HHHHHHHHHHHHhhcCC
Q psy1960 270 ITASPYLAGINFTGSVPTFNRLWLQV--GKNINVYKNFPRLIGECGGKNFHFIHASAN-----VESVVNGTIRSAFEYCG 342 (428)
Q Consensus 270 L~~~~~v~~I~fTGS~~~g~~i~~~~--a~~~~~~~~~~~~~lElGGkn~~iV~~dAD-----ld~Aa~~iv~saf~~~G 342 (428)
+ +++++|.||||+++|+.|++.+ +++++ |+++|+|||||+||++||| +|.+++.+++++|.|+|
T Consensus 219 l---~~~d~v~fTGS~~~G~~i~~~a~~a~~~~------~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aG 289 (513)
T cd07128 219 L---GEQDVVAFTGSAATAAKLRAHPNIVARSI------RFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAG 289 (513)
T ss_pred c---CCCCEEEEECCHHHHHHHHHHhhhhccCc------eEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcC
Confidence 3 5789999999999999999985 46776 8999999999999999999 99999999999999999
Q ss_pred CccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 343 QKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 343 Q~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++++|+|||+++||+|+++|++++++++
T Consensus 290 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 320 (513)
T cd07128 290 QKCTAIRRAFVPEARVDAVIEALKARLAKVV 320 (513)
T ss_pred CcccCCceEEEehHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999875
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-53 Score=445.33 Aligned_cols=285 Identities=19% Similarity=0.212 Sum_probs=254.1
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++++++|+ +++.|+.++..+|.
T Consensus 14 ~~~~~~i~G~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~------ 78 (496)
T PLN00412 14 DVYKYYADGEWRTSSSGKSVA--------ITNPST-RKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA------ 78 (496)
T ss_pred cccCceECCEEecCCCCCeEE--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH------
Confidence 556899999999764332222 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----------------c---cccce
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-----------------L---ASNLG 192 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-----------------~---~~~~~ 192 (428)
++|+++ +++ |+++++ ....+...+.|||..+++.| .++|++.. . ....+
T Consensus 79 -~iL~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (496)
T PLN00412 79 -ELLHKA-AAI--LKEHKA-PIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCL 153 (496)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeE
Confidence 999999 999 999988 77788889999998765532 34444210 0 01235
Q ss_pred eeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhh
Q psy1960 193 RGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTIT 271 (428)
Q Consensus 193 ~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~ 271 (428)
.++.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|.
T Consensus 154 ~~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~ 233 (496)
T PLN00412 154 TSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLT 233 (496)
T ss_pred EEEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHh
Confidence 6678899999999999999999999999998 999999999999999999999999999999999999998878899999
Q ss_pred cCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceE
Q psy1960 272 ASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRM 351 (428)
Q Consensus 272 ~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv 351 (428)
.||+++.|.|||| ++|+.+.++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+
T Consensus 234 ~~~~v~~V~ftGs-~~g~~v~~~a~--~~------~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv 304 (496)
T PLN00412 234 MHPGVNCISFTGG-DTGIAISKKAG--MV------PLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVV 304 (496)
T ss_pred cCCCcCEEEEeCh-HHHHHHHHHhC--CC------cEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEE
Confidence 9999999999999 99999988874 44 899999999999999999999999999999999999999999999
Q ss_pred EEeCCchHHHHHHHHHHHhcCCc
Q psy1960 352 YVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 352 ~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|||++++|+|+++|+++++++++
T Consensus 305 ~V~~~i~d~f~~~l~~~~~~~~~ 327 (496)
T PLN00412 305 LVMESVADALVEKVNAKVAKLTV 327 (496)
T ss_pred EEcHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999999998764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-53 Score=441.91 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=244.4
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ +.++++|+ +++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~ 69 (448)
T TIGR01780 2 YNPAT-GEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERS-------SLLRKW-YNL--MMENKD-DLARLITLEN 69 (448)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999888 7777788999
Q ss_pred CCCCCcccc------hhhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
|||..+++. +.++|++.. .+...+.++.|+|||++|+|||||+....+++++||+ ||+||
T Consensus 70 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vv 149 (448)
T TIGR01780 70 GKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVV 149 (448)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEe
Confidence 999877654 345555421 1123356678899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
+|||+.+|+++..++++++++|+|+|++|+++|+ +.++++.|+.||++++|+||||+++|+.|++.++++++ |
T Consensus 150 lKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~------~ 223 (448)
T TIGR01780 150 VKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVK------K 223 (448)
T ss_pred eECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCC------c
Confidence 9999999999999999999999999999999997 67889999999999999999999999999999998887 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++++
T Consensus 224 ~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 289 (448)
T TIGR01780 224 VSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLK 289 (448)
T ss_pred eEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999865
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-52 Score=439.36 Aligned_cols=278 Identities=20% Similarity=0.228 Sum_probs=249.3
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
-|++|||+|+.++.... ++||++ ++++++++.++.++ ++|+++|+ ++ +.++..+|. +
T Consensus 4 ~~~~i~g~~~~~~~~~~----------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~-------~ 62 (472)
T TIGR03250 4 EALRIAGEKVSRDRVIE----------VRYPYN-GTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERS-------A 62 (472)
T ss_pred CCceECCEEecCCCeEE----------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHH-------H
Confidence 47999999987554444 789998 89999999999999 99999999 76 578999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----c------------cccceeeecc
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-----L------------ASNLGRGEGL 197 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-----~------------~~~~~~~~~p 197 (428)
+|+++ +++ |+++.+ ....+...++|||..+++.+ .++|++.. + ....+..+.|
T Consensus 63 ~l~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 138 (472)
T TIGR03250 63 ILDRA-AAL--LAARKE-EISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREP 138 (472)
T ss_pred HHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcC
Confidence 99999 999 999988 77778899999998766542 34555431 0 1123567889
Q ss_pred c-ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCC
Q psy1960 198 D-GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPY 275 (428)
Q Consensus 198 ~-GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~ 275 (428)
+ |||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.+.++.|+.||+
T Consensus 139 ~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~ 218 (472)
T TIGR03250 139 LLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPH 218 (472)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCCC
Confidence 7 9999999999999999999999998 9999999999999999999999999999999999999988888999999999
Q ss_pred eeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 276 LAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 276 v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
++.|+||||+++|+.|.+.++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+
T Consensus 219 v~~v~fTGs~~~g~~i~~~a~--~~------~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~ 290 (472)
T TIGR03250 219 VDLVTFTGGVAIGKYIAARAG--YR------RQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQE 290 (472)
T ss_pred CCEEEEECcHHHHHHHHHHhc--CC------ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeH
Confidence 999999999999999988775 44 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCC
Q psy1960 356 SLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|+++|++++++++
T Consensus 291 ~i~d~f~~~l~~~~~~~~ 308 (472)
T TIGR03250 291 SVADRFTELLVEKTRAWR 308 (472)
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 999999999999998854
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-53 Score=438.91 Aligned_cols=265 Identities=23% Similarity=0.286 Sum_probs=243.5
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ |++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~ 69 (456)
T cd07110 2 INPAT-EATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERA-------KYLRAI-AEG--VRERRE-ELAELEARDN 69 (456)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999888 7777788899
Q ss_pred CCCCCcccch------hhhhhhcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CC
Q psy1960 169 QQPFGGGRMS------ALTFYLEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GS 225 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN 225 (428)
||+..++..+ .++|+... .+...+.++.|+|||++|+|||||+....+++++||+ ||
T Consensus 70 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN 149 (456)
T cd07110 70 GKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGC 149 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCC
Confidence 9998766532 34444220 1122456778899999999999999999999999998 99
Q ss_pred EEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCC
Q psy1960 226 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNF 305 (428)
Q Consensus 226 ~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~ 305 (428)
+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.||++++|+||||+++|+.|.++++++++
T Consensus 150 ~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~----- 224 (456)
T cd07110 150 TVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIK----- 224 (456)
T ss_pred EEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCC-----
Confidence 999999999999999999999999999999999999888889999999999999999999999999999999888
Q ss_pred CcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 306 PRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 306 ~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 225 -~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 291 (456)
T cd07110 225 -PVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIR 291 (456)
T ss_pred -eEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999998875
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-52 Score=443.15 Aligned_cols=281 Identities=19% Similarity=0.182 Sum_probs=245.6
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc-CccccCChhhhhhhhhhHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL-CPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~-~~W~~~~~~~R~~~~~~~~ 139 (428)
++.+|||+|+.+.+. .++ ++||++ ++++++++. +.++ ++|+++|+ |+ +.|+++|..+|+
T Consensus 5 ~~~~i~G~~~~~~~~-~~~--------~~nP~t-ge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~------- 66 (521)
T PRK11903 5 LANYVAGRWQAGSGA-GTP--------LFDPVT-GEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRA------- 66 (521)
T ss_pred hhhhCCCEEEcCCCC-eee--------eECCCC-CCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHH-------
Confidence 468999999975432 222 789998 899999996 7789 99999999 85 999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------cc---------ccce
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------LA---------SNLG 192 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------~~---------~~~~ 192 (428)
++|+++ +++ |+++.+ ....+..+++|||+.+++. +.++|++.. +. ....
T Consensus 67 ~~L~~~-a~~--l~~~~~-ela~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (521)
T PRK11903 67 ALLAAI-VKV--LQANRD-AYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQ 142 (521)
T ss_pred HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccce
Confidence 999999 999 999988 7777889999999877664 356666541 10 0123
Q ss_pred eeecc-cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhhhh
Q psy1960 193 RGEGL-DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDT 269 (428)
Q Consensus 193 ~~~~p-~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g~~ 269 (428)
..+.| +|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.++++.
T Consensus 143 ~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~ 222 (521)
T PRK11903 143 HVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDH 222 (521)
T ss_pred EEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhc
Confidence 34455 79999999999999999999999999 999999999999999999999999999 9999999999977666665
Q ss_pred hhcCCCeeEEEeeCChhhHHHHHHHH--hcccCcccCCCcEEEecCCCceeEEcCCCC-----HHHHHHHHHHHHhhcCC
Q psy1960 270 ITASPYLAGINFTGSVPTFNRLWLQV--GKNINVYKNFPRLIGECGGKNFHFIHASAN-----VESVVNGTIRSAFEYCG 342 (428)
Q Consensus 270 L~~~~~v~~I~fTGS~~~g~~i~~~~--a~~~~~~~~~~~~~lElGGkn~~iV~~dAD-----ld~Aa~~iv~saf~~~G 342 (428)
| +++++|+||||+++|+.|.+.+ +++++ |+++|+|||||+||++||| +|.+++.+++++|.|+|
T Consensus 223 l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~------~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sG 293 (521)
T PRK11903 223 L---QPFDVVSFTGSAETAAVLRSHPAVVQRSV------RVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSG 293 (521)
T ss_pred c---cCCCEEEEECCHHHHHHHHhhhhhhccCc------eeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccC
Confidence 5 7899999999999999999864 46666 8999999999999999999 59999999999999999
Q ss_pred CccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 343 QKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 343 Q~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++++|+|||+++||+|+++|+++++++++
T Consensus 294 Q~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 325 (521)
T PRK11903 294 QKCTAIRRIFVPEALYDAVAEALAARLAKTTV 325 (521)
T ss_pred CCccCCeEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999763
|
|
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-52 Score=437.04 Aligned_cols=266 Identities=23% Similarity=0.253 Sum_probs=244.6
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccc-cCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYE-KNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~-~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
+||+| ++++++++.++.++ ++++++|+ |++.|+ .+|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 2 ~~P~t-g~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e 69 (454)
T cd07109 2 FDPST-GEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERG-------RLLLRI-ARL--IREHAD-ELARLESLD 69 (454)
T ss_pred cCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHH
Confidence 68998 89999999999999 99999999 999877 99999999 999999 999 999988 777778889
Q ss_pred cCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
+|||..+++.+ .++++... .....+.++.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 70 ~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~Vv 149 (454)
T cd07109 70 TGKPLTQARADVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVV 149 (454)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 99998776542 34444321 1223467778899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.++++++|+|+|++|+++|++.+.++.|+.||+++.|+||||+++|+.|.+.++++++ |+
T Consensus 150 lKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~------p~ 223 (454)
T cd07109 150 VKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVV------PV 223 (454)
T ss_pred EECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCC------cE
Confidence 999999999999999999999999999999999877889999999999999999999999999999998888 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 224 ~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 289 (454)
T cd07109 224 TLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRV 289 (454)
T ss_pred EEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999874
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-52 Score=436.13 Aligned_cols=266 Identities=21% Similarity=0.257 Sum_probs=244.2
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc--cccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP--YEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~--W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
+||.+ ++++++++.++.++ ++|++.|+ +|+. |+.+|.++|. ++|+++ +++ ++++.+ ....+...
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~-------~~l~~~-a~~--l~~~~~-~la~~~~~ 69 (454)
T cd07118 2 RSPAH-GVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERA-------AVLLKV-ADL--IRARRE-RLALIETL 69 (454)
T ss_pred CCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHH
Confidence 58998 89999999999999 99999999 9975 9999999999 999999 999 999988 77777889
Q ss_pred hcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCE
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSS 226 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~ 226 (428)
++|||+.+++.+ .++|++.. .....+..+.|+|||++|+|||||+...++++++||+ ||+
T Consensus 70 e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~ 149 (454)
T cd07118 70 ESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCT 149 (454)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCE
Confidence 999998776542 34555421 1122356778899999999999999999999999998 999
Q ss_pred EEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCC
Q psy1960 227 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306 (428)
Q Consensus 227 VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~ 306 (428)
||+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.|+++++|.||||+++|+.|.+.++++++
T Consensus 150 Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~------ 223 (454)
T cd07118 150 VVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLK------ 223 (454)
T ss_pred EEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC------
Confidence 99999999999999999999999999999999999887889999999999999999999999999999999888
Q ss_pred cEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 307 ~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 224 ~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~ 291 (454)
T cd07118 224 KVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRV 291 (454)
T ss_pred cEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999998763
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-52 Score=437.10 Aligned_cols=267 Identities=24% Similarity=0.284 Sum_probs=245.3
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ |++.|+.+|.++|. ++|+++ +++ ++++.+ ....+...+
T Consensus 3 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 70 (456)
T cd07145 3 VRNPAN-GEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRY-------KILMKV-AEL--IERRKE-ELAKLLTIE 70 (456)
T ss_pred ccCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHh
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 999988 777788889
Q ss_pred cCCCCCcccch------hhhhhhcc-----c------------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-----L------------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-----~------------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+|||..+++.+ .+++++.. + ....+.++.|+|||++|+|||||+....+++++||+
T Consensus 71 ~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaa 150 (456)
T cd07145 71 VGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAV 150 (456)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHc
Confidence 99998766542 34554320 0 112346678999999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|.+.++++++
T Consensus 151 GN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~--- 227 (456)
T cd07145 151 GNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGK--- 227 (456)
T ss_pred CCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCC---
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999998887
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 228 ---~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 295 (456)
T cd07145 228 ---KVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKV 295 (456)
T ss_pred ---ceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhcCCc
Confidence 89999999999999999999999999999999999999999999999999999999999999998753
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-52 Score=433.77 Aligned_cols=264 Identities=22% Similarity=0.238 Sum_probs=243.4
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc--cccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP--YEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~--W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
+||+| ++++++++.++.++ ++|++.|+ +|+. |+. +..+|. ++|+++ +++ |+++++ ....+...
T Consensus 2 ~nP~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~ 68 (455)
T cd07120 2 IDPAT-GEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRA-------RVLLEL-ADA--FEANAE-RLARLLAL 68 (455)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHH
Confidence 68998 89999999999999 99999999 9985 998 899999 999999 999 999988 77778899
Q ss_pred hcCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
+.|||..+++.| .++|++.. .+...+.++.|+|||++|+|||||+...+++++|||+ ||+|
T Consensus 69 e~Gk~~~~a~~Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~v 148 (455)
T cd07120 69 ENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTV 148 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEE
Confidence 999998776643 46665431 1123456778899999999999999999999999998 9999
Q ss_pred EEeCCccchHHHHHHHHHHHH-cCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCC
Q psy1960 228 LWKPSDTALLSNYTIYKIMIE-AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~e-AGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~ 306 (428)
|+|||+.+|+++..+++++++ +|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++++++
T Consensus 149 vlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~------ 222 (455)
T cd07120 149 VVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLK------ 222 (455)
T ss_pred EeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------
Confidence 999999999999999999999 7999999999999888889999999999999999999999999999999887
Q ss_pred cEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 307 ~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 223 ~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~l~ 289 (455)
T cd07120 223 RLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVK 289 (455)
T ss_pred eEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999999876
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-52 Score=434.03 Aligned_cols=267 Identities=22% Similarity=0.263 Sum_probs=244.8
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 3 ~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 70 (451)
T cd07150 3 DLNPAD-GSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERE-------RILLKA-AEI--MERRAD-DLIDLLIDE 70 (451)
T ss_pred ccCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHh
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 998887 777778899
Q ss_pred cCCCCCcccch------hhhhhhc----------c---ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLE----------V---LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~----------~---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
+|||+.+++.+ .++++.. + .+...+.++.|+|||++|+|||||+...++++++||+ ||+|
T Consensus 71 ~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~V 150 (451)
T cd07150 71 GGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTV 150 (451)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeE
Confidence 99998765542 3444321 0 1223456778899999999999999999999999998 9999
Q ss_pred EEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 228 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.|+++++|+||||+++|+.|.++++++++ |
T Consensus 151 ilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~------~ 224 (451)
T cd07150 151 VLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLK------K 224 (451)
T ss_pred EEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCC------c
Confidence 9999999999999999999999999999999999888899999999999999999999999999999999887 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 225 ~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 291 (451)
T cd07150 225 ITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASKLKV 291 (451)
T ss_pred eEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998763
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-52 Score=448.79 Aligned_cols=278 Identities=16% Similarity=0.128 Sum_probs=241.9
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-c-cCccccCChhhhhhhhhhHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-S-LCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A-~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.++|||+|+.+.+. .++ ++||.+ ++++++++.++ .+ ++|+++|+ + |+.|+.+|..+|+ +
T Consensus 2 ~~~i~g~~~~~~~~-~~~--------v~nP~t-g~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~-------~ 63 (663)
T TIGR02278 2 QSYLSGEWRTGQGE-GVP--------VRDAST-GEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERA-------R 63 (663)
T ss_pred ceeECCEEEcCCCC-eEe--------ccCCCC-CCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHH-------H
Confidence 46899999876432 222 789999 89999999999 58 99999999 7 8999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhccc-------------c---------ccce
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEVL-------------A---------SNLG 192 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~~-------------~---------~~~~ 192 (428)
+|+++ +++ |+++.+ .... ..+++|||+.+++. +.++|++... + ...+
T Consensus 64 ~L~~~-a~~--l~~~~~-ela~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (663)
T TIGR02278 64 MLKAL-AQY--LSERKE-ALYA-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGR 138 (663)
T ss_pred HHHHH-HHH--HHHHHH-HHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceE
Confidence 99999 999 999987 5555 48899999876654 3455554310 0 1235
Q ss_pred eeeccc-ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhhhh
Q psy1960 193 RGEGLD-GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGDT 269 (428)
Q Consensus 193 ~~~~p~-GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g~~ 269 (428)
..+.|+ |||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++.++| +|+|++|+++|+.. +.
T Consensus 139 ~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~~---~~ 215 (663)
T TIGR02278 139 HILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSAG---DL 215 (663)
T ss_pred EEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCChH---HH
Confidence 667787 9999999999999999999999998 999999999999999999999999999 99999999998633 33
Q ss_pred hhcCCCeeEEEeeCChhhHHHHHHHH--hcccCcccCCCcEEEecCCCceeEEcCCCC-----HHHHHHHHHHHHhhcCC
Q psy1960 270 ITASPYLAGINFTGSVPTFNRLWLQV--GKNINVYKNFPRLIGECGGKNFHFIHASAN-----VESVVNGTIRSAFEYCG 342 (428)
Q Consensus 270 L~~~~~v~~I~fTGS~~~g~~i~~~~--a~~~~~~~~~~~~~lElGGkn~~iV~~dAD-----ld~Aa~~iv~saf~~~G 342 (428)
+..++++++|+||||+++|+.|++.+ +++++ |+++|+|||||+||++||| +|.|++.+++++|.|+|
T Consensus 216 ~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~------~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sG 289 (663)
T TIGR02278 216 LDHLDHRDVVAFTGSAATADRLRAHPNVLERGI------RFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAG 289 (663)
T ss_pred HhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCc------eEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCC
Confidence 33347789999999999999999874 36666 8999999999999999999 99999999999999999
Q ss_pred CccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 343 QKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 343 Q~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++++|+|||++++|+|+++|++++++++
T Consensus 290 Q~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 320 (663)
T TIGR02278 290 QKCTAIRRVIVPKALLEAVLKALQARLAKVV 320 (663)
T ss_pred CCccCCceEEEeHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999875
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-52 Score=433.96 Aligned_cols=265 Identities=20% Similarity=0.268 Sum_probs=243.4
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccc-cCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYE-KNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~-~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
+||.+ ++++++++.++.++ ++|+++|+ |++.|+ ++|..+|. ++|+++ +++ |+++.+ ....+...+
T Consensus 2 ~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e 69 (459)
T cd07089 2 INPAT-EEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERA-------RCLRQL-HEA--LEARKE-ELRALLVAE 69 (459)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 68998 89999999999999 99999999 999999 99999999 999999 999 999988 777788999
Q ss_pred cCCCCCcccc-------hhhhhhhcc-----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC
Q psy1960 168 GQQPFGGGRM-------SALTFYLEV-----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM 223 (428)
Q Consensus 168 ~gkp~~~~~~-------~~l~~~~~~-----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa 223 (428)
+|||..++.. +.+++++.. .....+.++.|+|||++|+|||||+...++++++||+
T Consensus 70 ~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~ 149 (459)
T cd07089 70 VGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALA 149 (459)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHH
Confidence 9999854322 234443320 1223457788999999999999999999999999998
Q ss_pred -CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcc
Q psy1960 224 -GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY 302 (428)
Q Consensus 224 -GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~ 302 (428)
||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||++++|.||||+++|+.|+++++++++
T Consensus 150 aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~-- 227 (459)
T cd07089 150 AGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLK-- 227 (459)
T ss_pred cCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC--
Confidence 99999999999999999999999999999999999999888889999999999999999999999999999998887
Q ss_pred cCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 303 KNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 303 ~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 228 ----~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~ 294 (459)
T cd07089 228 ----RVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEALP 294 (459)
T ss_pred ----cEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-52 Score=432.88 Aligned_cols=264 Identities=20% Similarity=0.279 Sum_probs=241.2
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++|+++|+ +++.|+.+|.++|. ++|+++ +++ ++++.+ ....+...++
T Consensus 2 ~~p~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~ 69 (456)
T cd07107 2 INPAT-GQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERA-------RMLREL-ATR--LREHAE-ELALIDALDC 69 (456)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHhc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999887 7777788899
Q ss_pred CCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEE
Q psy1960 169 QQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLW 229 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVl 229 (428)
|||..+++.+ .+++++.. .....+.++.|+|||++|+|||||+...+++++|||+ ||+||+
T Consensus 70 Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~ 149 (456)
T cd07107 70 GNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVV 149 (456)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEE
Confidence 9998766542 34444321 1123457778899999999999999999999999998 999999
Q ss_pred eCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEE
Q psy1960 230 KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309 (428)
Q Consensus 230 KPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~ 309 (428)
|||+.+|+++..++++++++ +|+|++|+++|++.++++.|+.||++++|.||||+++|+.|.++++++++ |++
T Consensus 150 Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~------~~~ 222 (456)
T cd07107 150 KPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIK------HVT 222 (456)
T ss_pred eCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCC------eEE
Confidence 99999999999999999995 99999999999887789999999999999999999999999999998877 899
Q ss_pred EecCCCceeEEcCCCCHHHHHHHHHHHH-hhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 310 GECGGKNFHFIHASANVESVVNGTIRSA-FEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 310 lElGGkn~~iV~~dADld~Aa~~iv~sa-f~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|+|||||+||++|||+|.|++.+++++ |.++||.|++++|+|||++++|+|+++|++++++++
T Consensus 223 lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 287 (456)
T cd07107 223 LELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIK 287 (456)
T ss_pred EECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999995 999999999999999999999999999999999865
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-52 Score=432.93 Aligned_cols=264 Identities=24% Similarity=0.294 Sum_probs=243.2
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.| ++++++++.++.++ +++++.|+ +++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~ 69 (457)
T cd07090 2 IEPAT-GEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERG-------RILRKA-ADL--LRERND-EIARLETIDN 69 (457)
T ss_pred cCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999988 7777788999
Q ss_pred CCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEE
Q psy1960 169 QQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLW 229 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVl 229 (428)
||+..+++.+ .++|++.. .+...+.++.|+|||++|+|||||+...++++++||+ ||+||+
T Consensus 70 Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~ 149 (457)
T cd07090 70 GKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVY 149 (457)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeee
Confidence 9998766543 44554421 1223456788899999999999999999999999998 999999
Q ss_pred eCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEE
Q psy1960 230 KPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309 (428)
Q Consensus 230 KPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~ 309 (428)
|||+.+|+++..+.+++.++|+|+|++|+++|++ ++++.|+.|+++++|+||||+++|+.|.++++++++ |++
T Consensus 150 Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~------~~~ 222 (457)
T cd07090 150 KPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGG-ETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIK------HVT 222 (457)
T ss_pred cCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCCh-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCC------ceE
Confidence 9999999999999999999999999999999865 589999999999999999999999999999998887 899
Q ss_pred EecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 310 lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||++++|+|+++|++++++++
T Consensus 223 lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 286 (457)
T cd07090 223 LELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIR 286 (457)
T ss_pred EecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999999999876
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=430.07 Aligned_cols=265 Identities=20% Similarity=0.204 Sum_probs=239.5
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc-cccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP-YEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~-W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
++||.+ ++++++++.++.++ ++|+++|+ ||+. |+.+|.++|. ++|+++ +++ |+++.+ ....+...
T Consensus 3 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~ 70 (455)
T cd07148 3 VVNPFD-LKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERI-------AILERL-ADL--MEERAD-ELALLIAR 70 (455)
T ss_pred ccCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHH
Confidence 689998 89999999999999 99999999 9997 4579999999 999999 999 999888 77777889
Q ss_pred hcCCCCCcccch------hhhhhhcc-----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV-----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM 223 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~-----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa 223 (428)
++|||+.+++.+ .++++... .+...+.++.|+|||++|+|||||+...++++++||+
T Consensus 71 e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 150 (455)
T cd07148 71 EGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIA 150 (455)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHH
Confidence 999998766542 33443321 0122467788999999999999999999999999998
Q ss_pred -CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcc
Q psy1960 224 -GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY 302 (428)
Q Consensus 224 -GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~ 302 (428)
||+||+|||+.+|+++..+.++++++|+|+|++|+++|++ +.++.|+.||++++|+||||+++|+.|.++++.+ +
T Consensus 151 aGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~~-~-- 226 (455)
T cd07148 151 AGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCEN-AVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-T-- 226 (455)
T ss_pred cCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCCh-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhcC-C--
Confidence 9999999999999999999999999999999999999965 5799999999999999999999999999988753 5
Q ss_pred cCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 303 KNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 303 ~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++
T Consensus 227 ----~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 294 (455)
T cd07148 227 ----RCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVV 294 (455)
T ss_pred ----cEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-51 Score=430.36 Aligned_cols=265 Identities=25% Similarity=0.307 Sum_probs=243.2
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ |++.|+.+|.++|. ++|+++ +++ |+++++ ....+...++
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~-------~~l~~~-a~~--l~~~~~-~la~~~~~e~ 69 (453)
T cd07115 2 LNPAT-GELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERG-------RILWRL-AEL--ILANAD-ELARLESLDT 69 (453)
T ss_pred CCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 58998 89999999999999 99999999 99999999999999 999999 999 999988 7777888999
Q ss_pred CCCCCcccc-------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
|||..+++. +.+++++.. .....+.++.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 70 Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi 149 (453)
T cd07115 70 GKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVV 149 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 999876642 234444321 1122356778899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.++++++++ |+
T Consensus 150 ~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~------~~ 223 (453)
T cd07115 150 LKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLK------RV 223 (453)
T ss_pred EECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCC------eE
Confidence 999999999999999999999999999999999887889999999999999999999999999999998887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 224 ~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 288 (453)
T cd07115 224 SLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLR 288 (453)
T ss_pred EEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999998875
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-51 Score=436.64 Aligned_cols=264 Identities=22% Similarity=0.287 Sum_probs=242.0
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||++ ++++++++.++.++ ++|+++|+ |++.|+++|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 36 v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~iL~~~-a~~--l~~~~~-ela~~~~~e 103 (524)
T PRK09407 36 VTAPFT-GEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERA-------AVLLRF-HDL--VLENRE-ELLDLVQLE 103 (524)
T ss_pred eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 789998 89999999999999 99999999 99999999999999 999999 999 999887 777788899
Q ss_pred cCCCCCcccch------hhhhhhcc-----------c----cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CC
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-----------L----ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GS 225 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-----------~----~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN 225 (428)
.|||..++..+ .++|++.. + ....+.++.|+|||++|+|||||+...++++++||+ ||
T Consensus 104 ~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~ALaaGN 183 (524)
T PRK09407 104 TGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPALLAGN 183 (524)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHHHcCC
Confidence 99998765432 34444321 0 123466778899999999999999999999999999 99
Q ss_pred EEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCC
Q psy1960 226 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNF 305 (428)
Q Consensus 226 ~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~ 305 (428)
+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.| ++.|+||||+++|+.|+++++++++
T Consensus 184 ~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~~~----- 256 (524)
T PRK09407 184 AVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRRLI----- 256 (524)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhcCC-----
Confidence 999999999999999999999999999999999999888889999986 6899999999999999999999888
Q ss_pred CcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 306 PRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 306 ~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 257 -~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~ 323 (524)
T PRK09407 257 -GFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRAMR 323 (524)
T ss_pred -cEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999999876
|
|
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-51 Score=447.97 Aligned_cols=281 Identities=17% Similarity=0.146 Sum_probs=241.0
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-c-cCccccCChhhhhhhhhhH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-S-LCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A-~~~W~~~~~~~R~~~~~~~ 138 (428)
..++||||+|+.+++.. .+ ++||.+ ++++++++.++ ++ ++|+++|+ | ++.|+++|..+|+
T Consensus 4 ~~~~~i~G~~~~~~~~~-~~--------~~nP~t-g~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~------ 66 (675)
T PRK11563 4 KLQSYVAGRWQTGQGEG-RP--------LHDAVT-GEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERA------ 66 (675)
T ss_pred cccceecCEEEcCCCCc-ee--------ccCCCC-CCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHH------
Confidence 45689999999864322 22 789998 89999999987 58 99999999 8 7899999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------cc----c--c---
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LA----S--N--- 190 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~----~--~--- 190 (428)
++|+++ +++ |+++.+ .... ...++|||+.+++.+ .++|++.. ++ . .
T Consensus 67 -~~L~~~-a~~--l~~~~~-ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 140 (675)
T PRK11563 67 -AMLKAL-AKY--LLERKE-ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFA 140 (675)
T ss_pred -HHHHHH-HHH--HHHhHH-HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCccc
Confidence 999999 999 999987 5554 478999998776543 35555431 10 0 1
Q ss_pred ceeeeccc-ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhh
Q psy1960 191 LGRGEGLD-GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFG 267 (428)
Q Consensus 191 ~~~~~~p~-GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g 267 (428)
....+.|+ |||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++.++| +|+|++|+++|++.
T Consensus 141 ~~~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~~--- 217 (675)
T PRK11563 141 GRHILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSAG--- 217 (675)
T ss_pred ceEEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCHH---
Confidence 13445565 9999999999999999999999998 999999999999999999999999999 99999999998643
Q ss_pred hhhhcCCCeeEEEeeCChhhHHHHHHH--HhcccCcccCCCcEEEecCCCceeEEcCCCC-----HHHHHHHHHHHHhhc
Q psy1960 268 DTITASPYLAGINFTGSVPTFNRLWLQ--VGKNINVYKNFPRLIGECGGKNFHFIHASAN-----VESVVNGTIRSAFEY 340 (428)
Q Consensus 268 ~~L~~~~~v~~I~fTGS~~~g~~i~~~--~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD-----ld~Aa~~iv~saf~~ 340 (428)
+.+..++++++|+||||+++|+.|.+. ++++++ |+++|+|||||+||++||| +|.|++.+++++|.|
T Consensus 218 ~~~~~~~~i~~v~FTGS~~~G~~i~~~~~a~~~~~------~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~ 291 (675)
T PRK11563 218 DLLDHLDGQDVVTFTGSAATAQKLRAHPNVVANSV------PFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVK 291 (675)
T ss_pred HHhhcCCCCCEEEEECcHHHHHHHHhhhhhhhCCc------eEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHh
Confidence 333334679999999999999999985 446777 8999999999999999995 999999999999999
Q ss_pred CCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 341 CGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 341 ~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+||.|++++|+|||+++||+|+++|+++++++++
T Consensus 292 aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~v 325 (675)
T PRK11563 292 AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVV 325 (675)
T ss_pred CCCccccceeEEeeHHHHHHHHHHHHHHHhcCcc
Confidence 9999999999999999999999999999999763
|
|
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-52 Score=435.28 Aligned_cols=286 Identities=26% Similarity=0.292 Sum_probs=254.8
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++..+|. ++|+++ +++ |+++.+ ....+...+
T Consensus 11 v~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~iL~~~-a~~--l~~~~~-~la~~~~~e 78 (462)
T PF00171_consen 11 VINPAT-GEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERA-------RILERF-ADL--LEERRD-ELAELIALE 78 (462)
T ss_dssp EEETTT-ECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred CCCCCC-cCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHH-------HHHHHH-HHH--Hhhccc-ccccccccc
Confidence 789998 89999999999999 99999999 99999999999999 999999 999 999888 777888899
Q ss_pred cCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
+|+|..+++.+ .+++++.. .+......+.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 79 ~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VV 158 (462)
T PF00171_consen 79 TGKPIAEARGEVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVV 158 (462)
T ss_dssp HTSSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEE
T ss_pred cccccccccchhhhhhhhhhhhhhcccceehhhcccccccccccccccccceeecccccccccccccchhhhhcccccce
Confidence 99998877653 45555431 1233456777899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.||+++.|.||||+++|+.|.+.++++++ |+
T Consensus 159 lkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~------~v 232 (462)
T PF00171_consen 159 LKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLK------PV 232 (462)
T ss_dssp EEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTS------EE
T ss_pred eeeccccccccccchhhccccccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhcccccc------cc
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEEEeehhhhccc
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFCFCSCFLLLFL 388 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~ 388 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++ .|+|
T Consensus 233 ~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~l~-----------~g~~ 301 (462)
T PF00171_consen 233 VLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAKLR-----------VGDP 301 (462)
T ss_dssp EEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHTSE-----------BSST
T ss_pred cccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhcccccc-----------ccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999854 4555
Q ss_pred --ccccCCcccccchHHH
Q psy1960 389 --FSTSVPVFCFCSCFLL 404 (428)
Q Consensus 389 --~~~~~~~~~~~~~~~~ 404 (428)
-.+.++|+.-....+-
T Consensus 302 ~~~~~~~gpl~~~~~~~~ 319 (462)
T PF00171_consen 302 LDESTDVGPLISKAQRER 319 (462)
T ss_dssp TSTTCSBCHCSSHHHHHH
T ss_pred ccccccccccccchhhhh
Confidence 3456777666555543
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-51 Score=428.94 Aligned_cols=283 Identities=23% Similarity=0.237 Sum_probs=253.2
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccC-ChhhhhhhhhhHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKN-SVGLLINTEVLHD 139 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~-~~~~R~~~~~~~~ 139 (428)
++++|||+|+.+.+ ..++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.+ +.++|.
T Consensus 2 ~~~~i~g~~~~~~~-~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~------- 64 (473)
T cd07082 2 FKYLINGEWKESSG-KTIE--------VYSPID-GEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERI------- 64 (473)
T ss_pred CCceECCEEecCCC-CeEe--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHH-------
Confidence 46899999998752 2222 789998 89999999999999 99999999 99999999 999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc----------c-------ccccceeeec
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE----------V-------LASNLGRGEG 196 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~----------~-------~~~~~~~~~~ 196 (428)
++|+++ +++ |+++.+ ....+...+.|+|..++..+ .+++++. . .+...+.++.
T Consensus 65 ~~L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 140 (473)
T cd07082 65 DCLHKF-ADL--LKENKE-EVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRRE 140 (473)
T ss_pred HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEe
Confidence 999999 999 998887 77778889999998765432 3344321 0 1122356788
Q ss_pred ccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCC
Q psy1960 197 LDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPY 275 (428)
Q Consensus 197 p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~ 275 (428)
|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.+++.++|+|+|++++++|++.++++.|+.|++
T Consensus 141 P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~ 220 (473)
T cd07082 141 PLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGR 220 (473)
T ss_pred cceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCC
Confidence 899999999999999999999999998 9999999999999999999999999999999999999988888999999999
Q ss_pred eeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 276 LAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 276 v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
++.|+||||+++|+.|.+.++ ++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|||||+
T Consensus 221 v~~V~ftGs~~~g~~i~~~a~--~~------~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~ 292 (473)
T cd07082 221 IDVISFTGSTEVGNRLKKQHP--MK------RLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHE 292 (473)
T ss_pred CCEEEEECcHHHHHHHHHHhC--CC------cEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcH
Confidence 999999999999999998876 45 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCCc
Q psy1960 356 SLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|+++|.++++++++
T Consensus 293 ~i~d~f~~~l~~~~~~~~~ 311 (473)
T cd07082 293 SVADELVELLKEEVAKLKV 311 (473)
T ss_pred HHHHHHHHHHHHHHhcCCC
Confidence 9999999999999998764
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-51 Score=427.81 Aligned_cols=267 Identities=23% Similarity=0.299 Sum_probs=243.9
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHH
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGS 165 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~ 165 (428)
++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|.++|. ++|+++ +++ |+++.+ ....+..
T Consensus 6 ~~~P~t-~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~ 73 (462)
T cd07112 6 TINPAT-GRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERK-------AVLLRL-ADL--IEAHRD-ELALLET 73 (462)
T ss_pred eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHH
Confidence 689998 89999999999999 99999999 997 59999999999 999999 999 999988 7777888
Q ss_pred HhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CC
Q psy1960 166 VVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GS 225 (428)
Q Consensus 166 l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN 225 (428)
.+.|||+.+++. +.++|++.. ........+.|+|||++|+|||||+...+++++|||+ ||
T Consensus 74 ~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN 153 (462)
T cd07112 74 LDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGN 153 (462)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCC
Confidence 999999876643 234444321 1123456778899999999999999999999999998 99
Q ss_pred EEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhc-ccCcccC
Q psy1960 226 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGK-NINVYKN 304 (428)
Q Consensus 226 ~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~-~~~~~~~ 304 (428)
+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.|+++++|.||||+++|+.|++.+++ +++
T Consensus 154 ~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~---- 229 (462)
T cd07112 154 SVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLK---- 229 (462)
T ss_pred eeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCC----
Confidence 999999999999999999999999999999999999888899999999999999999999999999999884 677
Q ss_pred CCcEEEecCCCceeEEcCCC-CHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 305 FPRLIGECGGKNFHFIHASA-NVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 305 ~~~~~lElGGkn~~iV~~dA-Dld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 230 --~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~ 298 (462)
T cd07112 230 --RVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKP 298 (462)
T ss_pred --EEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhcCCc
Confidence 899999999999999999 99999999999999999999999999999999999999999999998764
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-51 Score=426.84 Aligned_cols=263 Identities=22% Similarity=0.313 Sum_probs=240.8
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ |++.|++++.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-g~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~ 69 (446)
T cd07106 2 INPAT-GEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERR-------AALLAI-ADA--IEANAE-ELARLLTLEQ 69 (446)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999988 7777788999
Q ss_pred CCCCCcccch------hhhhhhccc----------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeC
Q psy1960 169 QQPFGGGRMS------ALTFYLEVL----------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKP 231 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~~----------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKP 231 (428)
|||..+++.+ .+++++... ......++.|+|||++|+|||||+...++++++||+ ||+||+||
T Consensus 70 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKp 149 (446)
T cd07106 70 GKPLAEAQFEVGGAVAWLRYTASLDLPDEVIEDDDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKP 149 (446)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhcCccccCCCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEEC
Confidence 9998665532 344543311 223466778899999999999999999999999998 99999999
Q ss_pred CccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEe
Q psy1960 232 SDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311 (428)
Q Consensus 232 s~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lE 311 (428)
|+.+|+++..++++++++ +|+|++|+++|+ .++++.|+.|++++.|+||||+++|+.|.++++++++ |+++|
T Consensus 150 s~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~-~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~------~~~lE 221 (446)
T cd07106 150 SPFTPLCTLKLGELAQEV-LPPGVLNVVSGG-DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK------RVTLE 221 (446)
T ss_pred CccchHHHHHHHHHHHHh-CCcCeEEEeeCC-hhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------eeEEe
Confidence 999999999999999995 999999999985 4689999999999999999999999999999999888 89999
Q ss_pred cCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 312 lGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 222 lGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~ 283 (446)
T cd07106 222 LGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAV 283 (446)
T ss_pred cCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999875
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-51 Score=428.03 Aligned_cols=262 Identities=20% Similarity=0.281 Sum_probs=239.5
Q ss_pred cCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcC
Q psy1960 92 MPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQ 169 (428)
Q Consensus 92 ~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~g 169 (428)
||.+ ++++++++.++.++ ++|+++|+ +++.|+++|.++|. ++|+++ +++ |+++.+ ....+...++|
T Consensus 2 ~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-el~~~~~~e~G 69 (454)
T cd07101 2 APFT-GEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERA-------AVFLRF-HDL--VLERRD-ELLDLIQLETG 69 (454)
T ss_pred cCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcC
Confidence 7988 89999999999999 99999999 99999999999999 999999 999 999988 77778899999
Q ss_pred CCCCcccch------hhhhhhcc---------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 170 QPFGGGRMS------ALTFYLEV---------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 170 kp~~~~~~~------~l~~~~~~---------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
|+..++..+ .+++++.. .....+.++.|+|||++|+|||||+...++++++||+ ||+|
T Consensus 70 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~v 149 (454)
T cd07101 70 KARRHAFEEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAV 149 (454)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEE
Confidence 998765432 33444321 0123466778899999999999999999999999998 9999
Q ss_pred EEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 228 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+|||+.+|+++..+.+++.++|+|+|++|+++|++.++++.|+.| ++.|.||||+++|+.|+++++++++ |
T Consensus 150 vlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~------~ 221 (454)
T cd07101 150 VLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLI------G 221 (454)
T ss_pred EEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCC------c
Confidence 9999999999999999999999999999999999888899999987 5689999999999999999999888 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 222 ~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~ 287 (454)
T cd07101 222 CSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRALR 287 (454)
T ss_pred EEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999875
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-51 Score=426.47 Aligned_cols=265 Identities=26% Similarity=0.345 Sum_probs=243.0
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ +++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-g~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e~ 69 (451)
T cd07103 2 INPAT-GEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERA-------AILRRW-ADL--IRERAE-DLARLLTLEQ 69 (451)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHc
Confidence 68998 79999999999999 99999999 99999999999999 999999 999 998887 6777788899
Q ss_pred CCCCCcccch------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
|||..+++.+ .++|+... .+.....++.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 70 Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VI 149 (451)
T cd07103 70 GKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVV 149 (451)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9998776542 34444321 1223456677899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.++++++|+|+|++|++++++.++++.|+.|+++++|+||||+++|+.|.+.++++++ |+
T Consensus 150 lKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~------~~ 223 (451)
T cd07103 150 LKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVK------RV 223 (451)
T ss_pred EECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------cE
Confidence 999999999999999999999999999999999887889999999999999999999999999999998887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 224 ~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 288 (451)
T cd07103 224 SLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLK 288 (451)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999865
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-51 Score=426.54 Aligned_cols=265 Identities=20% Similarity=0.235 Sum_probs=240.8
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ |++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 1 ~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e~ 68 (452)
T cd07102 1 ISPID-GSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERK-------AIVTRA-VEL--LAANTD-EIAEELTWQM 68 (452)
T ss_pred CCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHh
Confidence 47998 89999999999999 99999999 99999999999999 999999 999 998887 6667788999
Q ss_pred CCCCCcccch------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
|||..+++.+ .++++... .+...+.++.|+|||++|+|||||+...+.+++|||+ ||+||
T Consensus 69 Gk~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VV 148 (452)
T cd07102 69 GRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVI 148 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9998766432 23333220 1122456788899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.++++++|+|+|++|+++|++ +.++.|+.||+++.|+||||+++|+.|.++++++++ |+
T Consensus 149 lKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~------~v 221 (452)
T cd07102 149 LKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSH-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFI------KV 221 (452)
T ss_pred EECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC------cE
Confidence 99999999999999999999999999999999977 789999999999999999999999999999988777 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++
T Consensus 222 ~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~l~v 287 (452)
T cd07102 222 GLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKGYKL 287 (452)
T ss_pred EEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999999998753
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-51 Score=425.05 Aligned_cols=265 Identities=25% Similarity=0.282 Sum_probs=242.5
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
+||.+ ++++++++.++.++ ++|+++|+ |++ .|+.+|.++|. ++|+++ +++ |.++++ ....+...
T Consensus 2 ~~P~t-g~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~ 69 (457)
T cd07114 2 INPAT-GEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERG-------KLLRRL-ADL--IEANAE-ELAELETR 69 (457)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHH
Confidence 68998 89999999999999 99999999 986 59999999999 999999 999 999887 66677788
Q ss_pred hcCCCCCcccc------hhhhhhhc----------c---ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCE
Q psy1960 167 VGQQPFGGGRM------SALTFYLE----------V---LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSS 226 (428)
Q Consensus 167 ~~gkp~~~~~~------~~l~~~~~----------~---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~ 226 (428)
++|||+.+++. +.+++++. + .+...+.++.|+|||++|+|||||+...++++++||+ ||+
T Consensus 70 e~Gk~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~ 149 (457)
T cd07114 70 DNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNT 149 (457)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCe
Confidence 99999876554 24555431 0 1122356778899999999999999999999999998 999
Q ss_pred EEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCC
Q psy1960 227 VLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFP 306 (428)
Q Consensus 227 VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~ 306 (428)
||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.|+++++|.||||+++|+.+++.++++++
T Consensus 150 Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~------ 223 (457)
T cd07114 150 VVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLA------ 223 (457)
T ss_pred EEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------
Confidence 99999999999999999999999999999999999888889999999999999999999999999999999887
Q ss_pred cEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 307 RLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 307 ~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 224 ~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~~~ 290 (457)
T cd07114 224 PVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIR 290 (457)
T ss_pred eEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-51 Score=423.75 Aligned_cols=264 Identities=23% Similarity=0.319 Sum_probs=241.1
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.| ++++++++.++.++ +++++.|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~~L~~~-~~~--l~~~~~-~l~~~~~~e~ 69 (450)
T cd07092 2 VDPAT-GEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERS-------KALLKL-ADA--IEENAE-ELAALESRNT 69 (450)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999888 7777788899
Q ss_pred CCCCCcccc-------hhhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 169 QQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 169 gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
|||..+... +.+++++.. .+...+..+.|+|||++|+|||||+...++++++||+ ||+|
T Consensus 70 Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~V 149 (450)
T cd07092 70 GKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTV 149 (450)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEE
Confidence 999854322 233444321 1123456778899999999999999999999999998 9999
Q ss_pred EEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 228 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+|||+.+|+++..+.+++++ |+|+|++|+++|++.++++.|+.|+++++|+||||+++|+.|.++++++++ |
T Consensus 150 IlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~------~ 222 (450)
T cd07092 150 VLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLK------R 222 (450)
T ss_pred EEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCC------c
Confidence 999999999999999999999 999999999999887789999999999999999999999999999998887 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 223 ~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 288 (450)
T cd07092 223 VHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIR 288 (450)
T ss_pred EEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999999999999999999999999999999999865
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-51 Score=415.40 Aligned_cols=305 Identities=23% Similarity=0.261 Sum_probs=270.4
Q ss_pred HHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCc
Q psy1960 45 EREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCP 122 (428)
Q Consensus 45 ~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~ 122 (428)
..+.+.++++....+......+++|+.+.++.... ++||.++.++++.|.++++++ ++|++.|. +++.
T Consensus 96 ~la~L~~al~~~a~~~w~A~p~~~~~~~~~g~~~p----------V~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~ 165 (769)
T COG4230 96 RLASLSSALLASAGQKWQAAPIVNGAPVAGGEPRP----------VINPADPDDIVGTVTEATEADVEQALEAAVAAAPI 165 (769)
T ss_pred HHHHHHHHHHhhhhhhhccccccCCCcCCCCCccc----------ccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcc
Confidence 45677777776554433444567888777655444 899999999999999999999 99999999 9999
Q ss_pred cccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhccccccce-eee
Q psy1960 123 YEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEVLASNLG-RGE 195 (428)
Q Consensus 123 W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~~~~~~~-~~~ 195 (428)
|..+|+.+|+ .+|+|+ +|+ ++.+.. ....+...|.||.++.+.. |++|||+.......- ..+
T Consensus 166 W~atp~~eRA-------aiL~ra-Adl--me~~m~-~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~~~~ 234 (769)
T COG4230 166 WSATPPAERA-------AILERA-ADL--MEAQMP-QLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGNLTH 234 (769)
T ss_pred cccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCcccc
Confidence 9999999999 999999 999 998876 6666677899999876554 689999975432211 345
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|.+++|+|||||+.++..++++||+ ||+|+-||+++||+.+..-.++++|+|+|++++|++||+|+++|.+|+.|+
T Consensus 235 ~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~~da 314 (769)
T COG4230 235 RPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADA 314 (769)
T ss_pred CCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhhcCc
Confidence 5689999999999999999999999998 999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
++++|.||||+++++.|.++.+++-. ...|++.|+||.|+|||+.+|--|+++.+++.|+|..+||+|++.+.+|++
T Consensus 315 rv~GV~FTGSTevA~li~~~LA~r~g---~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ 391 (769)
T COG4230 315 RVAGVMFTGSTEVARLIQRQLAKRQG---RPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQ 391 (769)
T ss_pred ccceEEEeCcHHHHHHHHHHHhhcCC---CCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhh
Confidence 99999999999999999999998522 234899999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCC
Q psy1960 355 ESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~ 373 (428)
+++.|..++.|+-.+.+++
T Consensus 392 ~DvAd~~l~mLKGAm~el~ 410 (769)
T COG4230 392 EDVADRILTMLKGAMAELR 410 (769)
T ss_pred hhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999976
|
|
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-50 Score=421.41 Aligned_cols=260 Identities=22% Similarity=0.222 Sum_probs=236.5
Q ss_pred CeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCc
Q psy1960 97 KKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGG 174 (428)
Q Consensus 97 g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~ 174 (428)
++++++++.++.++ ++|+++|+ ||+.|+++|.++|. ++|+++ +++ |+++.+ ....+...++||+..+
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~ 69 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERA-------AVLRRA-ADL--LEEHAD-EIADWIVRESGSIRPK 69 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHhcCCCHHH
Confidence 47899999999999 99999999 99999999999999 999999 999 999988 7777888999999765
Q ss_pred ccc------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccc
Q psy1960 175 GRM------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 235 (428)
Q Consensus 175 ~~~------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~a 235 (428)
++. +.++++... .+...+.++.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+
T Consensus 70 a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~ 149 (443)
T cd07152 70 AGFEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRT 149 (443)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhCCccccccCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 543 234444321 1223456778899999999999999999999999998 999999999999
Q ss_pred hHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCC
Q psy1960 236 LLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314 (428)
Q Consensus 236 pl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGG 314 (428)
|+++ ..+.+++.++|+|+|++|+++| +.++++.|+.||++++|+||||+++|+.|.++++++++ |+++|+||
T Consensus 150 p~~~~~~l~~~~~~ag~P~gvv~~v~g-~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~------~~~lElGG 222 (443)
T cd07152 150 PVSGGVVIARLFEEAGLPAGVLHVLPG-GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLK------KVSLELGG 222 (443)
T ss_pred chhHHHHHHHHHHHhCcCcCcEEEecC-ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------cEEEECCC
Confidence 9996 7999999999999999999998 45689999999999999999999999999999998887 89999999
Q ss_pred CceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 315 kn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 223 k~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 282 (443)
T cd07152 223 KNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKHLPV 282 (443)
T ss_pred CCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999999998764
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-50 Score=421.72 Aligned_cols=264 Identities=20% Similarity=0.255 Sum_probs=240.7
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ +++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++
T Consensus 2 ~~P~t-~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~ 69 (457)
T cd07108 2 INPAT-GQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERG-------KLLARI-ADA--LEARSE-ELARLLALET 69 (457)
T ss_pred cCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHhc
Confidence 68998 89999999999999 99999999 99999999999999 999999 999 999988 7777888999
Q ss_pred CCCC-Ccccc------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPF-GGGRM------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~-~~~~~------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
||++ .+++. +.+++++.. .....+..+.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 70 Gk~~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV 149 (457)
T cd07108 70 GNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVV 149 (457)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9997 45443 234444321 1122356678899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|.++..+.+++.++ +|+|++|+++|++.++++.|+.||++++|+||||+++|+.|.+.++++++ |+
T Consensus 150 lKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~------~~ 222 (457)
T cd07108 150 LKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLI------PV 222 (457)
T ss_pred EECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCC------eE
Confidence 999999999999999999986 99999999999888889999999999999999999999999999999887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHH-HhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRS-AFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~s-af~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.++++ +|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 223 ~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~ 288 (457)
T cd07108 223 SLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLK 288 (457)
T ss_pred EEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999999999 5999999999999999999999999999999999865
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=422.09 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=242.7
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++++++|+ |+..|+.+|.++|. ++|+++ +++ |+++.+ ....+...+.
T Consensus 2 ~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~ 69 (455)
T cd07093 2 FNPAT-GEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERA-------RILHKV-ADL--IEARAD-ELALLESLDT 69 (455)
T ss_pred cCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHhc
Confidence 58998 89999999999999 99999999 99999999999999 999999 999 999887 7777788899
Q ss_pred CCCCCcccc-------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 169 QQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 169 gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
||+..+++. +.++++... .+...+.++.|+|||++|+|||||+...++++++||+ ||+||
T Consensus 70 Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VI 149 (455)
T cd07093 70 GKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVV 149 (455)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEE
Confidence 999865532 234444331 1223356678899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.|+++++|.||||+++|+.|.++++++++ |+
T Consensus 150 lkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~------~~ 223 (455)
T cd07093 150 LKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLK------PV 223 (455)
T ss_pred eECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhccc------ce
Confidence 999999999999999999999999999999999888889999999999999999999999999999998887 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.++||.|+++++||||++++|+|+++|++++++++
T Consensus 224 ~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~~~ 288 (455)
T cd07093 224 SLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALK 288 (455)
T ss_pred EeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999875
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-50 Score=421.90 Aligned_cols=265 Identities=24% Similarity=0.277 Sum_probs=241.3
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++++++|+ |++.|+.+|.++|. ++|.++ +++ |+++.+ ....+...+
T Consensus 3 ~~~P~t-~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e 70 (453)
T cd07094 3 VHNPYD-GEVIGKVPADDRADAEEALATARAGAENRRALPPHERM-------AILERA-ADL--LKKRAE-EFAKIIACE 70 (453)
T ss_pred ccCCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 999887 777788899
Q ss_pred cCCCCCcccch------hhhhhhcc-----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+|||..+++.+ .+++++.. .....+..+.|+|||++|+|||||+...++++++||+
T Consensus 71 ~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 150 (453)
T cd07094 71 GGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIAT 150 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHc
Confidence 99998766532 34443321 1122355678899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.+ +++
T Consensus 151 GN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~--- 225 (453)
T cd07094 151 GCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGK--- 225 (453)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCC---
Confidence 999999999999999999999999999999999999998888899999999999999999999999998877 444
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++++
T Consensus 226 ---~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~~~~ 293 (453)
T cd07094 226 ---RIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKV 293 (453)
T ss_pred ---ceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhccC
Confidence 89999999999999999999999999999999999999999999999999999999999999998653
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-50 Score=421.14 Aligned_cols=263 Identities=21% Similarity=0.252 Sum_probs=239.0
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.| ++++++++.++.++ ++|+++|+ +++.|+.++.++|. ++|+++ +++ |+++++ ....+...++
T Consensus 1 ~~P~t-~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~ 68 (453)
T cd07099 1 RNPAT-GEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRA-------QRLLRW-KRA--LADHAD-ELAELLHAET 68 (453)
T ss_pred CCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHc
Confidence 48998 79999999999999 99999999 99999999999999 999999 999 999888 7777888999
Q ss_pred CCCCCcccch------hhhhhhcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CC
Q psy1960 169 QQPFGGGRMS------ALTFYLEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GS 225 (428)
Q Consensus 169 gkp~~~~~~~------~l~~~~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN 225 (428)
|++..+...+ .++++... .+...+.++.|+|||++|+|||||+...++++++||+ ||
T Consensus 69 Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN 148 (453)
T cd07099 69 GKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGN 148 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCC
Confidence 9998654432 23343321 1123356778899999999999999999999999998 99
Q ss_pred EEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCC
Q psy1960 226 SVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNF 305 (428)
Q Consensus 226 ~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~ 305 (428)
+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.| ++++|+||||+++|+.|.+.++++++
T Consensus 149 ~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~----- 221 (453)
T cd07099 149 AVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDG-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLI----- 221 (453)
T ss_pred EEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCc-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCC-----
Confidence 99999999999999999999999999999999999976 688999988 59999999999999999999998877
Q ss_pred CcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 306 PRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 306 ~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 222 -~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~ 288 (453)
T cd07099 222 -PVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALR 288 (453)
T ss_pred -eEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-50 Score=424.32 Aligned_cols=302 Identities=15% Similarity=0.131 Sum_probs=254.4
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
..|++...|..++..+. +++.+.+.+++.+++ +...++.... ++||++ ++++++++.+ +
T Consensus 27 ~~~~~~~~y~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~----------~~~P~~-~~l~~~~~~a---d 85 (549)
T cd07127 27 PESPSPKIYGETAAAAG--KAAFEALLGQRFDLD-----QPGASGWVGG----------EVSPYG-VELGVTYPQC---D 85 (549)
T ss_pred CCCCCccccCCcCcHhH--HHHHHHHhCCCccCC-----CCCCCCCeee----------eECCCC-CcEEEEEchH---H
Confidence 45788899988877655 677777776644443 2222223333 789998 6788899888 8
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-------c----
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-------M---- 177 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-------~---- 177 (428)
++|+++|+ |++.|+++++.+|. ++|+++ +++ |+++++ ....+..+++||++.++. .
T Consensus 86 v~~ai~aA~~A~~~W~~~~~~~R~-------~il~~~-a~~--l~~~~~-ela~a~~~e~Gk~~~~a~qa~~~~evd~a~ 154 (549)
T cd07127 86 PDALLAAARAAMPGWRDAGARARA-------GVCLEI-LQR--LNARSF-EMAHAVMHTTGQAFMMAFQAGGPHAQDRGL 154 (549)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHhCHH-HHHHHHHHHHCCCHHHHHhcccHHHHHHHH
Confidence 99999999 99999999999999 999999 999 998877 777788899999985432 1
Q ss_pred hhhhhhhc--------------ccc-----ccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchH
Q psy1960 178 SALTFYLE--------------VLA-----SNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALL 237 (428)
Q Consensus 178 ~~l~~~~~--------------~~~-----~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl 237 (428)
+.++|+.. .+. .....++.|+||+++|+|||||++....++++||+ ||+||||||+.+|+
T Consensus 155 e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~l 234 (549)
T cd07127 155 EAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAIL 234 (549)
T ss_pred HHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccch
Confidence 22333332 010 01122567899999999999999999999999998 99999999999999
Q ss_pred HHH----HHHHHHHHcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEec
Q psy1960 238 SNY----TIYKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGEC 312 (428)
Q Consensus 238 ~a~----~l~~ll~eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lEl 312 (428)
++. .+.+++.++|+|+|++|+++++ +.++++.|+.||+|++|.||||+++|+.|++.++. + |+++|+
T Consensus 235 s~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~--~------~v~~El 306 (549)
T cd07127 235 PLAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--A------QVYTEK 306 (549)
T ss_pred hHHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhcc--C------cEEEec
Confidence 875 4558999999999999999986 46789999999999999999999999999999874 3 899999
Q ss_pred CCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC---------chHHHHHHHHHHHhcC
Q psy1960 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES---------LFCFCSCFLLLFLFSA 372 (428)
Q Consensus 313 GGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s---------i~d~f~~~L~~~l~~l 372 (428)
||||++||++|||++.+++.+++++|.|+||+|++++|+|||++ +||+|+++|+++++++
T Consensus 307 GGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l 375 (549)
T cd07127 307 AGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL 375 (549)
T ss_pred CCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 8999999999999986
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-50 Score=421.41 Aligned_cols=264 Identities=17% Similarity=0.181 Sum_probs=237.5
Q ss_pred ccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 91 PMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 91 ~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
+||.+ ++++++++.++.++ ++|+++|+ |++.|+++|.++|. ++|+++ +++ |+++.+ ....+...+.
T Consensus 1 ~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~ 68 (465)
T cd07098 1 YDPAT-GQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERR-------KVLRSL-LKY--ILENQE-EICRVACRDT 68 (465)
T ss_pred CCCCC-CCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHc
Confidence 48998 89999999999999 99999999 99999999999999 999999 999 998887 7777788999
Q ss_pred CCCCCcccc-------hhhhhhhcc-----------cc-----ccceeeecccceEEEECCCchhhhhhHhhhhhhcC-C
Q psy1960 169 QQPFGGGRM-------SALTFYLEV-----------LA-----SNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-G 224 (428)
Q Consensus 169 gkp~~~~~~-------~~l~~~~~~-----------~~-----~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-G 224 (428)
|+|+.+++. +.++|+... .. .....++.|+|||++|+|||||+.....++++||+ |
T Consensus 69 Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaG 148 (465)
T cd07098 69 GKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAG 148 (465)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcC
Confidence 999876532 234444321 11 12345568899999999999999999999999998 9
Q ss_pred CEEEEeCCccchHHHHHHHHHH----HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccC
Q psy1960 225 SSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN 300 (428)
Q Consensus 225 N~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~ 300 (428)
|+||+|||+.+|+++..+++++ .++|+|+|++|+++|++ ++++.|+.||+|+.|.||||+++|+.|.+.++++++
T Consensus 149 N~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~-~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~ 227 (465)
T cd07098 149 NAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLP-ETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLT 227 (465)
T ss_pred CEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCH-HHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 9999999999999999766554 68999999999999976 789999999999999999999999999999998887
Q ss_pred cccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 301 VYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 301 ~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+||||++||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 228 ------~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~ 294 (465)
T cd07098 228 ------PVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQALR 294 (465)
T ss_pred ------eEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999998865
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-50 Score=425.49 Aligned_cols=261 Identities=16% Similarity=0.148 Sum_probs=230.4
Q ss_pred cccCCCCCeeEEEEeCCCHhHHHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhc
Q psy1960 90 QPMPHNHKKKIAKFYYATPVLKSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVG 168 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~ 168 (428)
.+||++ ++++++++.++. ++|+++|+ ||+.|+++++.+|. ++|+++ +++ |+++.+ ....+...++
T Consensus 69 e~~P~t-~~~~~~~~~~~~--~~av~aA~~A~~~W~~~~~~~R~-------~vL~~~-a~~--l~~~~~-elA~~~~~et 134 (551)
T TIGR02288 69 ERSPYG-VELGVTYPQCDG--DALLDAAHAALPGWRDAGARARA-------GVCLEI-LQR--LNARSF-EIAHAVMHTT 134 (551)
T ss_pred ccCCCC-CCEEEEEcCCCH--HHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHh
Confidence 579998 899999999986 78999999 99999999999999 999999 999 999988 7778888888
Q ss_pred CCCCCccc-----------chhhhhhhcc-------------cc-c--cce---eeecccceEEEECCCchhhhhhHhhh
Q psy1960 169 QQPFGGGR-----------MSALTFYLEV-------------LA-S--NLG---RGEGLDGFVAAVSPFNFTAIGGNLAY 218 (428)
Q Consensus 169 gkp~~~~~-----------~~~l~~~~~~-------------~~-~--~~~---~~~~p~GVV~~I~P~NfP~~~~~~~i 218 (428)
|||+.+++ .+.++|+... .+ . ..+ ..+.|+|||++|+|||||+....+++
T Consensus 135 Gk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l 214 (551)
T TIGR02288 135 GQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGL 214 (551)
T ss_pred CCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHH
Confidence 88875432 1234444321 00 0 111 24678999999999999999999999
Q ss_pred hhhcC-CCEEEEeCCccchHHHH----HHHHHHHHcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHH
Q psy1960 219 TPALM-GSSVLWKPSDTALLSNY----TIYKIMIEAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLW 292 (428)
Q Consensus 219 apALa-GN~VVlKPs~~apl~a~----~l~~ll~eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~ 292 (428)
+|||+ ||+||+|||+.+|+++. .+.+++.++|+|+|++|+++|+ +.++++.|+.||+|++|.||||+++|+.|.
T Consensus 215 ~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~ 294 (551)
T TIGR02288 215 FASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLE 294 (551)
T ss_pred HHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHHHHHH
Confidence 99998 99999999999999766 5679999999999999999986 778999999999999999999999999999
Q ss_pred HHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC---------chHHHHH
Q psy1960 293 LQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES---------LFCFCSC 363 (428)
Q Consensus 293 ~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s---------i~d~f~~ 363 (428)
+.++. + ++++|+|||||+||++|||+|.+++.+++++|.|+||.|++++|+|||++ +||+|++
T Consensus 295 ~~aa~--~------~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~ 366 (551)
T TIGR02288 295 QNARQ--A------QVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAA 366 (551)
T ss_pred Hhccc--C------cEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHH
Confidence 88763 3 79999999999999999999999999999999999999999999999999 7999999
Q ss_pred HHHHHHhcC
Q psy1960 364 FLLLFLFSA 372 (428)
Q Consensus 364 ~L~~~l~~l 372 (428)
+|+++++++
T Consensus 367 ~L~~~~~~l 375 (551)
T TIGR02288 367 DLATAIDGL 375 (551)
T ss_pred HHHHHHHHh
Confidence 999999985
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-50 Score=418.57 Aligned_cols=263 Identities=20% Similarity=0.241 Sum_probs=237.9
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++++++|+ |++.|+++|.++|. ++|+++ +++ ++++.+ ....+...+
T Consensus 3 ~~~P~t-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e 70 (452)
T cd07147 3 VTNPYT-GEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRA-------AILLHC-VAR--LEERFE-ELAETIVLE 70 (452)
T ss_pred ccCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 998887 677788899
Q ss_pred cCCCCCcccch------hhhhhhcc-----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+|||..+++.+ .++++... .+...+..+.|+|||++|+|||||+...++++++||+
T Consensus 71 ~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaa 150 (452)
T cd07147 71 AGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAA 150 (452)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHc
Confidence 99998766542 23343221 0112345677899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..++++++++|+|+|++|+++|++ +.++.|+.||++++|+||||+++|+.|.+.++. +
T Consensus 151 GN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~-~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~~--~--- 224 (452)
T cd07147 151 GCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSR-DDADLLVTDERIKLLSFTGSPAVGWDLKARAGK--K--- 224 (452)
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCCc-cchhHHhcCCCCCEEEEECCHHHHHHHHHHhCc--C---
Confidence 9999999999999999999999999999999999999965 578999999999999999999999999988763 2
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 225 ---~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 291 (452)
T cd07147 225 ---KVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALK 291 (452)
T ss_pred ---ceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-50 Score=420.23 Aligned_cols=266 Identities=13% Similarity=0.042 Sum_probs=231.6
Q ss_pred CHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------
Q psy1960 107 TPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------- 177 (428)
Q Consensus 107 ~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------- 177 (428)
...| ++|+++|+ +|+.|+.+|.++|. ++|+++ +++ +++|.+ ....+...+.|||..+++.
T Consensus 8 ~~~~v~~av~~a~~af~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~l~~e~GKp~~~a~~~Ev~~~~ 76 (484)
T PLN02174 8 GAADASILVTELRRSFDDGVTRGYEWRV-------TQLKKL-MII--CDNHEP-EIVAALRDDLGKPELESSVYEVSLLR 76 (484)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 4678 99999999 99999999999999 999999 999 999998 8888889999999876643
Q ss_pred hhhhhhhc------------c----ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHH
Q psy1960 178 SALTFYLE------------V----LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNY 240 (428)
Q Consensus 178 ~~l~~~~~------------~----~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~ 240 (428)
+.++|++. . .....+..+.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~ 156 (484)
T PLN02174 77 NSIKLALKQLKNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSA 156 (484)
T ss_pred HHHHHHHHHHHHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHH
Confidence 22333332 0 0112467788999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEE
Q psy1960 241 TIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFI 320 (428)
Q Consensus 241 ~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV 320 (428)
.+++++.+ |+|+|++|+++|++. .+..|+. +++++|+||||+++|+.|+++++++++ |+++|+|||||+||
T Consensus 157 ~l~~l~~~-~lp~gvv~vv~G~~~-~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~------~v~LELGGk~p~iV 227 (484)
T PLN02174 157 LLAKLLEQ-YLDSSAVRVVEGAVT-ETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLT------PVVLELGGKSPVVV 227 (484)
T ss_pred HHHHHHHH-hCCCCEEEEEECChH-HHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCC------cEEEecCCCCeEEE
Confidence 99999999 699999999999554 4677776 899999999999999999999999988 89999999999999
Q ss_pred cCCCCHHHHHHHHHHHHh-hcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEEEeehhhhccc-ccccCCcccc
Q psy1960 321 HASANVESVVNGTIRSAF-EYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFCFCSCFLLLFL-FSTSVPVFCF 398 (428)
Q Consensus 321 ~~dADld~Aa~~iv~saf-~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~-~~~~~~~~~~ 398 (428)
++|||+|.|++.+++++| .|+||.|++++|+|||++++|+|+++|+++++++++ |+| -.+.++|+.=
T Consensus 228 ~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~-----------G~p~~~~~~Gpli~ 296 (484)
T PLN02174 228 DSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYG-----------KNPMESKDMSRIVN 296 (484)
T ss_pred cCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcC-----------CCCcccCCcCCCCC
Confidence 999999999999999999 599999999999999999999999999999998763 333 1455666655
Q ss_pred cchHH
Q psy1960 399 CSCFL 403 (428)
Q Consensus 399 ~~~~~ 403 (428)
..-.+
T Consensus 297 ~~~~~ 301 (484)
T PLN02174 297 STHFD 301 (484)
T ss_pred HHHHH
Confidence 54443
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-49 Score=415.54 Aligned_cols=261 Identities=20% Similarity=0.228 Sum_probs=237.5
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||++ ++++++++.++.++ ++|+++|+ + |+.+|.++|. ++|+++ +++ |+++++ ....+...+
T Consensus 3 ~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 67 (451)
T cd07146 3 VRNPYT-GEVVGTVPAGTEEALREALALAASY---RSTLTRYQRS-------AILNKA-AAL--LEARRE-EFARLITLE 67 (451)
T ss_pred ccCCCC-CCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHH
Confidence 689998 79999999999999 99999998 6 8889999999 999999 999 999988 777788999
Q ss_pred cCCCCCcccc------hhhhhhhcc-----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRM------SALTFYLEV-----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~------~~l~~~~~~-----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+|||+.+++. +.+++++.. .....+..+.|+|||++|+|||||+...++++++||+
T Consensus 68 ~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaa 147 (451)
T cd07146 68 SGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAA 147 (451)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHc
Confidence 9999877654 244554421 1122356778899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.||+++.|+||||+++|+.|.+.++ .+
T Consensus 148 GN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~--- 222 (451)
T cd07146 148 NNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YK--- 222 (451)
T ss_pred CCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CC---
Confidence 9999999999999999999999999999999999999988889999999999999999999999999988764 34
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 223 ---~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~ 289 (451)
T cd07146 223 ---RQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAALV 289 (451)
T ss_pred ---ceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhcCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-49 Score=412.66 Aligned_cols=264 Identities=22% Similarity=0.268 Sum_probs=238.9
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++++++|+ |++.|+.+|.++|. ++|.++ +++ ++++.+ ....+...+
T Consensus 3 ~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e 70 (453)
T cd07149 3 VISPYD-GEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERA-------EILERA-AQL--LEERRE-EFARTIALE 70 (453)
T ss_pred ccCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 998887 666677889
Q ss_pred cCCCCCcccch------hhhhhhcc-----c------------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV-----L------------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~-----~------------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+||+..+++.+ .++++... + +...+.++.|+|||++|+|||||+...++++++||+
T Consensus 71 ~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaa 150 (453)
T cd07149 71 AGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAA 150 (453)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHc
Confidence 99998765432 33443320 0 112356678899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+.++++++|+|+|++|+++|++.++++.|+.||++++|+||||+++|+.|.+.++ ++
T Consensus 151 GN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~--- 225 (453)
T cd07149 151 GNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LK--- 225 (453)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CC---
Confidence 9999999999999999999999999999999999999988888999999999999999999999999988864 44
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|++++++++
T Consensus 226 ---~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~~~ 292 (453)
T cd07149 226 ---KVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLV 292 (453)
T ss_pred ---ceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHhCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-49 Score=410.85 Aligned_cols=246 Identities=23% Similarity=0.272 Sum_probs=224.1
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~ 183 (428)
++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++|||..+++.| .++|+
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~ 70 (429)
T cd07100 2 EAALDRAHAAFLAWRKTSFAERA-------ALLRKL-ADL--LRERKD-ELARLITLEMGKPIAEARAEVEKCAWICRYY 70 (429)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 57899999 99999999999999 999999 999 999888 77778899999998876542 34444
Q ss_pred hcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC
Q psy1960 184 LEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG 250 (428)
Q Consensus 184 ~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG 250 (428)
... .....+.++.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++.++|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~ag 150 (429)
T cd07100 71 AENAEAFLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAG 150 (429)
T ss_pred HHHHHHhcCCeeccCCCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcC
Confidence 321 1223456778899999999999999999999999998 999999999999999999999999999
Q ss_pred CCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHH
Q psy1960 251 VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVV 330 (428)
Q Consensus 251 lP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa 330 (428)
+|+|++|+++|++ +.+..|+.|+++++|.||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|+
T Consensus 151 lP~gvv~~v~g~~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~------~~~lelgG~~p~iV~~daDl~~aa 223 (429)
T cd07100 151 FPEGVFQNLLIDS-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLK------KSVLELGGSDPFIVLDDADLDKAV 223 (429)
T ss_pred CCcCcEEEEeCCc-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCc------ceEEecCCCCeeEECCCCCHHHHH
Confidence 9999999999966 467899999999999999999999999999998888 899999999999999999999999
Q ss_pred HHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 331 NGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 331 ~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 224 ~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~ 267 (429)
T cd07100 224 KTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKV 267 (429)
T ss_pred HHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999998753
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-49 Score=407.87 Aligned_cols=246 Identities=23% Similarity=0.274 Sum_probs=222.7
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~ 183 (428)
++|+++|+ +++.|+.+|.++|. ++|+++ +++ |+++.+ ....+...++|||..++..| .++++
T Consensus 3 ~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~ 71 (431)
T cd07095 3 DAAVAAARAAFPGWAALSLEERA-------AILRRF-AEL--LKANKE-ELARLISRETGKPLWEAQTEVAAMAGKIDIS 71 (431)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 78999999 99999999999999 999999 999 999988 77778889999998776542 23433
Q ss_pred hc------------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC
Q psy1960 184 LE------------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG 250 (428)
Q Consensus 184 ~~------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG 250 (428)
.. ......+.+++|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag 151 (431)
T cd07095 72 IKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAG 151 (431)
T ss_pred HHHHHHhcCCcccCCCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhC
Confidence 21 11233466778899999999999999999999999998 999999999999999999999999999
Q ss_pred CCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcc-cCcccCCCcEEEecCCCceeEEcCCCCHHHH
Q psy1960 251 VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKN-INVYKNFPRLIGECGGKNFHFIHASANVESV 329 (428)
Q Consensus 251 lP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~-~~~~~~~~~~~lElGGkn~~iV~~dADld~A 329 (428)
+|+|++|+++|+ .+.++.|+.|++++.|.||||+++|+.|.+.++.+ .+ ++++|+|||||+||++|||+|.|
T Consensus 152 ~P~g~~~~v~g~-~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~------~~~lElgG~~~~iV~~daDl~~a 224 (431)
T cd07095 152 LPPGVLNLVQGG-RETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGK------ILALEMGGNNPLVVWDVADIDAA 224 (431)
T ss_pred cChhHheEEeCc-HHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCC------cEEEECCCCCeEEECCCCCHHHH
Confidence 999999999985 56799999999999999999999999999987754 34 89999999999999999999999
Q ss_pred HHHHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHHHHhcCCc
Q psy1960 330 VNGTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 330 a~~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~~l~~l~v 374 (428)
++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++++++++
T Consensus 225 a~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~~~~ 270 (431)
T cd07095 225 AYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRI 270 (431)
T ss_pred HHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999 999999999999998764
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-49 Score=407.21 Aligned_cols=238 Identities=12% Similarity=0.077 Sum_probs=212.4
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccchh--------hh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSA--------LT 181 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~~--------l~ 181 (428)
++|+++|+ ||+.|+.+|+.+|. ++|+++ +++ |+++.+ ....+...++|||+.+++.+. .+
T Consensus 2 ~~Ai~~A~~A~~~W~~~~~~~R~-------~iL~~~-a~~--l~~~~~-ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~ 70 (439)
T cd07081 2 DDAVAAAKVAQQGLSCKSQEMVD-------LIFRAA-AEA--AEDARI-DLAKLAVSETGMGRVEDKVIKNHFAAEYIYN 70 (439)
T ss_pred HHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCChHHHHHHHHHHHHHHHHH
Confidence 57999999 99999999999999 999999 999 999988 777888999999987766421 12
Q ss_pred hhhc-------cc--cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH----
Q psy1960 182 FYLE-------VL--ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI---- 247 (428)
Q Consensus 182 ~~~~-------~~--~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~---- 247 (428)
++.. +. ....+..+.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~ 150 (439)
T cd07081 71 VYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAV 150 (439)
T ss_pred HHhccccCceecCCCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHH
Confidence 2211 01 123467788999999999999999999999999998 999999999999999998888885
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|.+.++++.|+.||+|++|+||||++ +.+.++++++ |+++|+|||||+||++|||+|
T Consensus 151 ~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k------~~~lElGGk~p~IV~~dADl~ 220 (439)
T cd07081 151 AAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGK------PAIGVGAGNTPVVIDETADIK 220 (439)
T ss_pred HcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCC------CEEEEcCCCCeEEEcCCCCHH
Confidence 779999999999998878999999999999999999998 4566777777 899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHH
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFL 369 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l 369 (428)
.|++.+++++|.|+||.|++.+|+|||+++||+|+++|+++.
T Consensus 221 ~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~ 262 (439)
T cd07081 221 RAVQSIVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFEGQG 262 (439)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998875
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-49 Score=406.85 Aligned_cols=247 Identities=21% Similarity=0.225 Sum_probs=224.0
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~ 183 (428)
++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...++|||..+++. +.++++
T Consensus 3 ~~ai~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~ 71 (432)
T cd07105 3 DQAVEAAAAAFPAWSKTPPSERR-------DILLKA-ADL--LESRRD-EFIEAMMEETGATAAWAGFNVDLAAGMLREA 71 (432)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhCHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 78999999 99999999999999 999999 999 999988 7777888999999644433 234454
Q ss_pred hcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc
Q psy1960 184 LEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA 249 (428)
Q Consensus 184 ~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA 249 (428)
+.. .....+.++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~a 151 (432)
T cd07105 72 ASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEA 151 (432)
T ss_pred HHHHHHhcCeecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHc
Confidence 321 1123456778999999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCccEEEeeCCC---hhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 250 GVPPGVVNFVPADG---PVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 250 GlP~gvv~vv~g~g---~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
|+|+|++|+++|++ .++++.|+.||+++.|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+
T Consensus 152 GlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~------~~~lElgGk~p~iV~~dadl 225 (432)
T cd07105 152 GLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLK------PVLLELGGKAPAIVLEDADL 225 (432)
T ss_pred CcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC------eEEEeCCCCCceEECCCCCH
Confidence 99999999999853 4578999999999999999999999999999999888 89999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 226 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 273 (432)
T cd07105 226 DAAANAALFGAFLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFA 273 (432)
T ss_pred HHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999998775
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-49 Score=406.81 Aligned_cols=239 Identities=13% Similarity=0.049 Sum_probs=215.6
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccchhhhhhhcc
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEV 186 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~~l~~~~~~ 186 (428)
++ ++|+++|+ ||+.|++++.++|. ++|+++ +++ |+++.+ ....+...++|+|..++..+.++++...
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~-------~iL~~~-a~~--l~~~~~-ela~~~~~E~Gk~~~~~~~~~~~~~~~~ 72 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADRE-------KIIEAI-REA--LLSNAE-ELAEMAVEETGMGRVEDKIAKNHLAAEK 72 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHh
Confidence 57 99999999 99999999999999 999999 999 999988 7777788999999876655555554321
Q ss_pred --------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH----
Q psy1960 187 --------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI---- 247 (428)
Q Consensus 187 --------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~---- 247 (428)
.....+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~ 152 (429)
T cd07121 73 TPGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIA 152 (429)
T ss_pred cCcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHH
Confidence 0012355678999999999999999999999999998 999999999999999999999884
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|++.+.++.|+.||+|++|+||||+++|+.|++. .+ |+++|+|||||+||++|||+|
T Consensus 153 ~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k------~~~lelGGk~p~iV~~dADld 222 (429)
T cd07121 153 EAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS----GK------KAIGAGAGNPPVVVDETADIE 222 (429)
T ss_pred HcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CC------ceEeecCCCceEEEecCCCHH
Confidence 78999999999999777889999999999999999999999999875 24 899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHH
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLF 368 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~ 368 (428)
+|++.+++++|.|+||.|++++|+|||+++||+|+++|++.
T Consensus 223 ~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~ 263 (429)
T cd07121 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN 263 (429)
T ss_pred HHHHHHHhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999999887
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-48 Score=403.01 Aligned_cols=248 Identities=15% Similarity=0.072 Sum_probs=224.5
Q ss_pred CCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------
Q psy1960 106 ATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------ 177 (428)
Q Consensus 106 a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------ 177 (428)
.++++ ++|+++|+ |++.|+.++.++|. ++|+++ +++ |+++++ ....+.+.+.|||..+++.
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~e~~~~ev~~~ 70 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRL-------WQLKQL-YWA--VKDNEE-AIVEALKKDLGRPPFETLLTEVSGV 70 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhHHHHHHH
Confidence 57788 99999999 99999999999999 999999 999 999988 7777889999999876642
Q ss_pred -hhhhhhhcc-----------c------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH
Q psy1960 178 -SALTFYLEV-----------L------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS 238 (428)
Q Consensus 178 -~~l~~~~~~-----------~------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~ 238 (428)
+.+++++.. . ....+..+.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|++
T Consensus 71 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~ 150 (436)
T cd07135 71 KNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHT 150 (436)
T ss_pred HHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHH
Confidence 234455421 0 112456788999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 239 a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+..+.+++++ |+|+|++|+++|++.+++ .|+.|| ++.|+||||+++|+.|.+.++++++ |+++|+|||||+
T Consensus 151 ~~~l~~l~~~-~lP~g~v~vv~g~~~~~~-~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~------~~~lelgG~~~~ 221 (436)
T cd07135 151 AALLAELVPK-YLDPDAFQVVQGGVPETT-ALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLT------PVTLELGGKSPV 221 (436)
T ss_pred HHHHHHHHHH-hCCcCEEEEEcCCchhHH-HHHhCC-CCEEEEECCcHHHHHHHHHHHhcCC------CeEEEccCCCcE
Confidence 9999999999 699999999999776655 588999 9999999999999999999988887 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
||++|||+|.|++.+++++|.++||.|++++|+|||++++|+|+++|++++++++
T Consensus 222 iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 276 (436)
T cd07135 222 IVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFY 276 (436)
T ss_pred EECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999865
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=404.53 Aligned_cols=242 Identities=14% Similarity=0.043 Sum_probs=217.0
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccchhhhh
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTF 182 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~~l~~ 182 (428)
..+.++ ++++++|+ |+..|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|++..+++.+.+++
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~~L~~l-a~~--l~~~~~-ela~~~~~E~Gk~~~ea~~~~~~~ 100 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQ-------RIIDAI-REA--LLPHAE-ELAELAVEETGMGRVEDKIAKNVA 100 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHHCCCcHHHHHHHHHH
Confidence 345678 99999999 99999999999999 999999 999 999988 777778889999988776544444
Q ss_pred hhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH
Q psy1960 183 YLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 183 ~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
+... .....+.++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..++++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~ 180 (465)
T PRK15398 101 AAEKTPGVEDLTTEALTGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLN 180 (465)
T ss_pred HHHHhccccccccCcccCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHH
Confidence 3221 0122356678999999999999999999999999999 999999999999999999999876
Q ss_pred ----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCC
Q psy1960 248 ----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHAS 323 (428)
Q Consensus 248 ----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~d 323 (428)
++|+|+|++|++++++.+.++.|+.||+|++|+||||+++|+.|++ ..+ |+++|+|||||+||++|
T Consensus 181 ~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k------~~~~elGGk~p~IV~~d 250 (465)
T PRK15398 181 EAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGK------KAIGAGAGNPPVVVDET 250 (465)
T ss_pred HHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCC------ceeeecCCCceEEEecC
Confidence 6899999999999977778999999999999999999999999987 234 89999999999999999
Q ss_pred CCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHH
Q psy1960 324 ANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLL 367 (428)
Q Consensus 324 ADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~ 367 (428)
||+|+|++.+++++|.|+||.|++++|+|||++++|+|+++|++
T Consensus 251 ADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~ 294 (465)
T PRK15398 251 ADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEK 294 (465)
T ss_pred CCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-48 Score=404.01 Aligned_cols=250 Identities=16% Similarity=0.082 Sum_probs=225.2
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-h---
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-S--- 178 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-~--- 178 (428)
++..++ ++|+++|+ ||+.|+.++..+|. ++|+++ +++ |+++.+ ....+...+.|||+.+++. +
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~~Ev~~ 70 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRK-------SQLKGL-LRL--LKDNEE-AIFKALHQDLGKHRVEAYRDEVGV 70 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHH
Confidence 456788 99999999 99999999999999 999999 999 999988 7778889999999877642 2
Q ss_pred ---hhhhhhc-------c---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH
Q psy1960 179 ---ALTFYLE-------V---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS 238 (428)
Q Consensus 179 ---~l~~~~~-------~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~ 238 (428)
.++|++. . .....+..++|+|||++|+|||||+....+++++||+ ||+||+|||+.+|++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~ 150 (484)
T PLN02203 71 LTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPAT 150 (484)
T ss_pred HHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHH
Confidence 3344332 0 1122457788999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 239 a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+..+.+++.++ +|+|++|+++| +.++++.|+.|+ +++|+||||+++|+.|.++++++++ |+++|+|||||+
T Consensus 151 ~~~l~~~~~~~-lP~gvv~vv~g-~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~------~v~lElGGknp~ 221 (484)
T PLN02203 151 SAFLAANIPKY-LDSKAVKVIEG-GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLT------PVALELGGKCPC 221 (484)
T ss_pred HHHHHHHHHHh-CCcCEEEEEeC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCC------CEEEEecCCCeE
Confidence 99999999996 99999999998 678999999995 9999999999999999999998888 899999999999
Q ss_pred EEcC---CCCHHHHHHHHHHHHhh-cCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 319 FIHA---SANVESVVNGTIRSAFE-YCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 319 iV~~---dADld~Aa~~iv~saf~-~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
||++ |||+|.|++.+++++|. |+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 222 iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~ 281 (484)
T PLN02203 222 IVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFFG 281 (484)
T ss_pred EEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHHhcC
Confidence 9997 69999999999999996 89999999999999999999999999999998763
|
|
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-48 Score=402.14 Aligned_cols=244 Identities=18% Similarity=0.088 Sum_probs=219.7
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTF 182 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~ 182 (428)
++.+++|+ ||+.|+.+|..+|+ ++|+++ +++ |+++.+ ....+...++|||+.+++. +.++|
T Consensus 1 ~~~v~~a~~a~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~ 69 (449)
T cd07136 1 ESLVEKQRAFFKTGATKDVEFRI-------EQLKKL-KQA--IKKYEN-EILEALKKDLGKSEFEAYMTEIGFVLSEINY 69 (449)
T ss_pred ChHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 35789999 99999999999999 999999 999 999988 7777888999999877743 23444
Q ss_pred hhc-------c---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 183 YLE-------V---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 183 ~~~-------~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
++. . .+...+.++.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~ 149 (449)
T cd07136 70 AIKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKI 149 (449)
T ss_pred HHHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHH
Confidence 432 0 0122456778999999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
++++ +|+|++|+++|+ .+.+..|+.|+ ++.|+||||+++|+.|.++++++++ |+++|+|||||+||++|||
T Consensus 150 ~~~a-lP~gv~~~v~g~-~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~------~v~lElgGknp~iV~~dAD 220 (449)
T cd07136 150 IEET-FDEEYVAVVEGG-VEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLT------PVTLELGGKSPCIVDEDAN 220 (449)
T ss_pred HHHh-CCCCEEEEEeCC-hHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCC------CEEEEecCCCeEEECCCCC
Confidence 9998 999999999994 46688888776 9999999999999999999998887 8999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 221 ld~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~ 269 (449)
T cd07136 221 LKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKFYG 269 (449)
T ss_pred HHHHHHHHHHHHHcccCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999753
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-48 Score=400.52 Aligned_cols=247 Identities=23% Similarity=0.260 Sum_probs=223.9
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~ 183 (428)
+++++.|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...++||+..++..+ .++++
T Consensus 3 ~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~ 71 (431)
T cd07104 3 DRAYAAAAAAQKAWAATPPQERA-------AILRKA-AEI--LEERRD-EIADWLIRESGSTRPKAAFEVGAAIAILREA 71 (431)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 78999999 99999999999999 999999 999 999888 77777888999987655432 33443
Q ss_pred hcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH-HHHHHHHHHH
Q psy1960 184 LEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS-NYTIYKIMIE 248 (428)
Q Consensus 184 ~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~-a~~l~~ll~e 248 (428)
... .+...+.++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|.+ +..+.+++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~ 151 (431)
T cd07104 72 AGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEE 151 (431)
T ss_pred HHHHHHhcCccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHH
Confidence 221 1223456778899999999999999999999999998 999999999999998 5789999999
Q ss_pred cCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHH
Q psy1960 249 AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVES 328 (428)
Q Consensus 249 AGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~ 328 (428)
+|+|+|++|+++|++.++++.|+.|++++.|.||||+++|+.|.++++++++ |+++|+|||||+||++|||+|.
T Consensus 152 aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~------~~~lelgG~~~~iV~~dadl~~ 225 (431)
T cd07104 152 AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLK------KVALELGGNNPLIVLDDADLDL 225 (431)
T ss_pred cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCC------cEEEEcCCCCeEEECCCCCHHH
Confidence 9999999999999888889999999999999999999999999999998887 8999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 329 VVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 329 Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 226 aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~~~~ 271 (431)
T cd07104 226 AVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPV 271 (431)
T ss_pred HHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhcCc
Confidence 9999999999999999999999999999999999999999998763
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=402.87 Aligned_cols=248 Identities=16% Similarity=0.107 Sum_probs=224.0
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-----
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM----- 177 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~----- 177 (428)
..+.++ ++++++|+ +|..|+.++.++|. ++|+++ +++ |+++.+ ....+...+.||+..+++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~-------~~L~~l-~~~--l~~~~~-~i~~a~~~d~Gk~~~ea~~~Ev~~ 71 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRK-------QQLRNL-LRM--LEENKQ-EFSEAVHKDLGRHPFETKMTEVLL 71 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHH
Confidence 357788 99999999 99999999999999 999999 999 999988 7778889999999776542
Q ss_pred --hhhhhhhc--------c--------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH
Q psy1960 178 --SALTFYLE--------V--------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS 238 (428)
Q Consensus 178 --~~l~~~~~--------~--------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~ 238 (428)
+.++++.. . .....+.++.|+|||++|+|||||+...+.++++||+ ||+||+|||+.+|.+
T Consensus 72 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t 151 (493)
T PTZ00381 72 TVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHT 151 (493)
T ss_pred HHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHH
Confidence 12222211 0 1123466788999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 239 a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+..+.+++.++ +|+|++++++| +.++++.|+.|+ +++|+||||+++|+.|+++++++++ |+++|+|||||+
T Consensus 152 ~~~l~~ll~~~-lp~~~v~vv~g-~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~------pv~lElGGk~p~ 222 (493)
T PTZ00381 152 SKLMAKLLTKY-LDPSYVRVIEG-GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLT------PCTLELGGKSPV 222 (493)
T ss_pred HHHHHHHHHHh-CCcCEEEEecC-CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCC------cEEEEcCCCCce
Confidence 99999999996 99999999998 667889999987 9999999999999999999999888 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcC
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSA 372 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l 372 (428)
||++|||+|.|++.+++++|.|+||.|+|++|+|||++++|+|+++|++.++++
T Consensus 223 iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~~ 276 (493)
T PTZ00381 223 IVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEF 276 (493)
T ss_pred EEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999985
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-47 Score=395.37 Aligned_cols=241 Identities=14% Similarity=0.074 Sum_probs=215.4
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------h-hhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------S-ALT 181 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~-~l~ 181 (428)
++|+++|+ ||..|+++|.++|. ++|+++ +++ ++++.+ ....+...++|||+.+++. + .++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~eR~-------~~L~~~-a~~--l~~~~e-ela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~ 70 (436)
T cd07122 2 DELVERARKAQREFATFSQEQVD-------KIVEAV-AWA--AADAAE-ELAKMAVEETGMGVVEDKVIKNHFASEYVYN 70 (436)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCcHHHHHHHHHHHHHHHHH
Confidence 57899999 99999999999999 999999 999 999988 7778889999999876653 1 345
Q ss_pred hhhcc---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH----
Q psy1960 182 FYLEV---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI---- 247 (428)
Q Consensus 182 ~~~~~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~---- 247 (428)
++... .....+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.++++
T Consensus 71 ~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~ 150 (436)
T cd07122 71 DIKDMKTVGVIEEDEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAV 150 (436)
T ss_pred HHhcCcceeeeccCCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHH
Confidence 55431 1123466788999999999999999999999999999 999999999999999999888865
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+++|.+.++++.|++||+|++|.||||+++++ .++++++ |+++|+|||||+||++|||+|
T Consensus 151 eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~------~~~~elgG~~p~iV~~dADl~ 220 (436)
T cd07122 151 AAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVK----AAYSSGK------PAIGVGPGNVPAYIDETADIK 220 (436)
T ss_pred HcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCC------CEEEecCCCCeEEEcCCCCHH
Confidence 789999999999998778899999999999999999999754 4556666 899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcC
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSA 372 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l 372 (428)
.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++...+
T Consensus 221 ~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l 265 (436)
T cd07122 221 RAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAYF 265 (436)
T ss_pred HHHHHHHHHhhccCCCCCCCCCEEEEechhHHHHHHHHHHhccee
Confidence 999999999999999999999999999999999999999988765
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-47 Score=393.15 Aligned_cols=243 Identities=16% Similarity=0.071 Sum_probs=217.9
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhh
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFY 183 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~ 183 (428)
+|+++|+ +|..|+.++..+|. ++|+++ +++ |+++++ ....+...+.|||+.++.. +.++|+
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRK-------SQLKGL-LRL--VDENED-DIFAALRQDLGKPSAESFRDEVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 5889999 99999999999999 999999 999 999988 7777889999999876542 233443
Q ss_pred hc-------c-c--------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 184 LE-------V-L--------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 184 ~~-------~-~--------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+. + . ....+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~ 151 (432)
T cd07137 72 IKELKKWMAPEKVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLI 151 (432)
T ss_pred HHHHHHHhCCcccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHH
Confidence 32 1 0 112356788999999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.++ +|+|++|+++| +.+.++.|+.| ++++|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+
T Consensus 152 ~~~-~P~gvv~~v~g-~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~------~~~lElgG~np~iV~~dAdl 222 (432)
T cd07137 152 PEY-LDTKAIKVIEG-GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLT------PVTLELGGKCPVIVDSTVDL 222 (432)
T ss_pred HHh-CCcCeEEEEeC-CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCC------cEEEEccCCCcEEEcCCCCH
Confidence 995 99999999999 55678889987 59999999999999999999998887 89999999999999999999
Q ss_pred HHHHHHHHHHHh-hcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAF-EYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf-~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++++| .|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 223 ~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~ 271 (432)
T cd07137 223 KVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFFG 271 (432)
T ss_pred HHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999 599999999999999999999999999999998654
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-47 Score=395.42 Aligned_cols=247 Identities=19% Similarity=0.140 Sum_probs=218.8
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~ 183 (428)
++|+++|+ +++.|+++|.++|. ++|+++ +++ |+++.+ ....+...++|+|..+.+.+ .++++
T Consensus 2 ~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~ 70 (454)
T cd07129 2 DAAAAAAAAAFESYRALSPARRA-------AFLEAI-ADE--IEALGD-ELVARAHAETGLPEARLQGELGRTTGQLRLF 70 (454)
T ss_pred hHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 57899999 99999999999999 999999 999 999887 67777888999998755432 33333
Q ss_pred hcc---------------c------cccceeeecccceEEEECCCchhhhh--hHhhhhhhcC-CCEEEEeCCccchHHH
Q psy1960 184 LEV---------------L------ASNLGRGEGLDGFVAAVSPFNFTAIG--GNLAYTPALM-GSSVLWKPSDTALLSN 239 (428)
Q Consensus 184 ~~~---------------~------~~~~~~~~~p~GVV~~I~P~NfP~~~--~~~~iapALa-GN~VVlKPs~~apl~a 239 (428)
+.. . ......++.|+|||++|+|||||+.. ..+++++||+ ||+||+|||+.+|+++
T Consensus 71 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~ 150 (454)
T cd07129 71 ADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTS 150 (454)
T ss_pred HHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHH
Confidence 321 0 01224667889999999999999876 4578999998 9999999999999999
Q ss_pred HHHHHHHH----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhc--ccCcccCCCcEEEecC
Q psy1960 240 YTIYKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGK--NINVYKNFPRLIGECG 313 (428)
Q Consensus 240 ~~l~~ll~----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~--~~~~~~~~~~~~lElG 313 (428)
..+.+++. ++|+|+|++|+++|++.++++.|+.||+|++|+||||+.+|+.|.+++++ +++ |+++|+|
T Consensus 151 ~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~------p~~lElG 224 (454)
T cd07129 151 ELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPI------PFYAELG 224 (454)
T ss_pred HHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccc------eeEeecC
Confidence 99988774 89999999999999877789999999999999999999999999999987 466 8999999
Q ss_pred CCceeEEcCCC---CHHHHHHHHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHHHHhcCCc
Q psy1960 314 GKNFHFIHASA---NVESVVNGTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 314 Gkn~~iV~~dA---Dld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~~l~~l~v 374 (428)
||||+||++|| |+|.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|+++++++++
T Consensus 225 G~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~ 289 (454)
T cd07129 225 SVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAAAPA 289 (454)
T ss_pred CcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhccCC
Confidence 99999999999 89999999999999999999999999999999 999999999999999874
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=390.59 Aligned_cols=243 Identities=17% Similarity=0.117 Sum_probs=217.1
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCC-CCcccc-------hhhhh
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQP-FGGGRM-------SALTF 182 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp-~~~~~~-------~~l~~ 182 (428)
..+++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...+.||+ ..++.. +.++|
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~ 70 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERR-------DRLDRL-KAL--LLDNQD-ALAEAISADFGHRSRHETLLAEILPSIAGIKH 70 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH
Confidence 4678899 99999999999999 999999 999 999988 7777889999975 444422 23444
Q ss_pred hhcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 183 YLEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 183 ~~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
+... .....+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l 150 (434)
T cd07133 71 ARKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAEL 150 (434)
T ss_pred HHHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHH
Confidence 4320 1122467788999999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
++++ +|+|++|+++|+ .++++.|+.|+ ++.|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||
T Consensus 151 ~~~a-lP~g~~~~v~g~-~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~------~~~lElgGk~~~iV~~dad 221 (434)
T cd07133 151 LAEY-FDEDEVAVVTGG-ADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLT------PVTLELGGKSPAIIAPDAD 221 (434)
T ss_pred HHHh-CCcCeEEEEeCC-hHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCc------eEEEEccCCCcEEEeCCCC
Confidence 9997 999999999994 46789898776 9999999999999999999999888 8999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 222 l~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~ 270 (434)
T cd07133 222 LAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKMYP 270 (434)
T ss_pred HHHHHHHHHHHHhccCCCcccCCCEEEEcHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999998754
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-46 Score=386.45 Aligned_cols=244 Identities=22% Similarity=0.198 Sum_probs=220.2
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~ 183 (428)
++|+++|+ |++.|+++|..+|. ++|+++ +++ |+++.+ ....+...++|||. +... +.++|+
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~ 69 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRA-------DFLARI-IQR--LAAKSY-DIAAGAVLVTGKGW-MFAENICGDQVQLRAR 69 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHcCCch-hhhhhhcchHHHHHHH
Confidence 57999999 99999999999999 999999 999 999988 77788899999998 3332 234444
Q ss_pred hcc--------------c---cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 184 LEV--------------L---ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 184 ~~~--------------~---~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
... . ....+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~ 149 (442)
T cd07084 70 AFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRL 149 (442)
T ss_pred HHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHH
Confidence 110 0 123456778899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCC-CCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCC
Q psy1960 246 MIEAGV-PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASA 324 (428)
Q Consensus 246 l~eAGl-P~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dA 324 (428)
++++|+ |+|++|+++|++. +++.|+.||++++|+||||+++|+.|.+++++ + |+++|+|||||+||++||
T Consensus 150 l~~ag~~P~g~~~~v~g~~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~------~v~lElgG~~~~iV~~da 220 (442)
T cd07084 150 LHYAGLLPPEDVTLINGDGK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--A------RIYLELAGFNWKVLGPDA 220 (442)
T ss_pred HHHhCCCCccceEEeeCCcH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--C------cEEEeccCcCcEEECCCh
Confidence 999998 9999999999876 89999999999999999999999999998764 4 899999999999999999
Q ss_pred -CHHHHHHHHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHHHHhcCCcc
Q psy1960 325 -NVESVVNGTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLLFLFSASVP 375 (428)
Q Consensus 325 -Dld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~~l~~l~v~ 375 (428)
|+|.|++.+++++|.|+||.|++++|+|||++ ++|+|+++|.+.++++++-
T Consensus 221 dd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~~~~g 273 (442)
T cd07084 221 QAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE 273 (442)
T ss_pred hhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHhcccC
Confidence 69999999999999999999999999999999 9999999999999998864
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-46 Score=387.15 Aligned_cols=242 Identities=13% Similarity=0.084 Sum_probs=216.3
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhh
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFY 183 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~ 183 (428)
+|+++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...+.|||..++.. +.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~ 70 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRI-------QQLEAL-LRM--LEENED-EIVEALAKDLRKPKFEAVLSEILLVKNEIKYA 70 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 5899999 99999999999999 999999 999 999988 7778889999999876542 123333
Q ss_pred hc--------c--------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 184 LE--------V--------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 184 ~~--------~--------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
.. . .....+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~ 150 (443)
T cd07132 71 ISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELI 150 (443)
T ss_pred HHHHHHHhCCccCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 21 0 0123567788999999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.++ +|+|++|+++|++.+ +..++. ++++.|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+
T Consensus 151 ~~~-lp~gv~~vv~g~~~~-~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~------~~~lElgG~~p~iV~~dADl 221 (443)
T cd07132 151 PKY-LDKECYPVVLGGVEE-TTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLT------PVTLELGGKSPCYVDKSCDI 221 (443)
T ss_pred HHh-CCcCeEEEEeCCHHH-HHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCC------ceEEEcCCCCceEEcCCCCH
Confidence 985 999999999996554 556765 589999999999999999999988887 89999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 222 ~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 268 (443)
T cd07132 222 DVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALKKTLKEFY 268 (443)
T ss_pred HHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999998875
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-46 Score=384.50 Aligned_cols=242 Identities=18% Similarity=0.118 Sum_probs=217.6
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhh
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFY 183 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~ 183 (428)
+|+++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...++|||..++.. +.++++
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~ 70 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRK-------AQLKAL-KRM--LTENEE-EIAAALYADLGKPPAEAYLTEIAVVLGEIDHA 70 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999 99999999999999 999999 999 999988 7777889999999754432 233333
Q ss_pred hc--------c--------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 184 LE--------V--------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 184 ~~--------~--------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
.. . ...+...++.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~ 150 (426)
T cd07087 71 LKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150 (426)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 21 0 1123466778899999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.+ |+|+|++|+++|++ +.++.|+.|| ++.|+||||+++|+.|.++++++++ |+++|+|||||+||++|||+
T Consensus 151 ~~-~~P~gv~~vv~g~~-~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~------~~~lelgG~~~~iV~~dadl 221 (426)
T cd07087 151 PK-YFDPEAVAVVEGGV-EVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLT------PVTLELGGKSPCIVDKDANL 221 (426)
T ss_pred HH-hCCCCEEEEEeCCc-hHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCC------ceEEeccCCCceEecCCCCH
Confidence 99 69999999999965 5689999998 9999999999999999999998887 89999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++.+++++
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~ 268 (426)
T cd07087 222 EVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELIEELKKAIKEFY 268 (426)
T ss_pred HHHHHHHHHHHHhccCCccccCCEEEEcHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999864
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-46 Score=385.07 Aligned_cols=241 Identities=17% Similarity=0.151 Sum_probs=218.1
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhh
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFY 183 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~ 183 (428)
+++++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...++||++.+++. +.++++
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~ 70 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERI-------AKLKRL-KKA--ILARRE-EIIAALAADFRKPAAEVDLTEILPVLSEINHA 70 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 5788999 99999999999999 999999 999 999988 7788889999999876642 223332
Q ss_pred hcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 184 LEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 184 ~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
... .+...+.++.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~ 150 (433)
T cd07134 71 IKHLKKWMKPKRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKII 150 (433)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 210 1123457788899999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
+++ +|+|++++++|+ .+.++.|+.|+ ++.|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+
T Consensus 151 ~~a-~p~g~v~~v~g~-~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~------~~~lelgG~~~~iV~~dAD~ 221 (433)
T cd07134 151 REA-FDEDEVAVFEGD-AEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLA------SVTLELGGKSPTIVDETADL 221 (433)
T ss_pred HHh-CCcCEEEEEeCC-hhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCC------cEEEEccCCCcEEECCCCCH
Confidence 999 999999999995 56899999998 9999999999999999999988877 89999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcC
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSA 372 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l 372 (428)
|.|++.+++++|.++||.|++++|+|||++++|+|+++|+++++++
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~~ 267 (433)
T cd07134 222 KKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKF 267 (433)
T ss_pred HHHHHHHHHHhhcCcCCcccCCcEEEECHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999975
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-46 Score=382.87 Aligned_cols=222 Identities=22% Similarity=0.270 Sum_probs=202.1
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ |+++++ ....+...++|||..+++.| .++|++.. .+...+.++.|+|||+
T Consensus 1 L~~~-a~~--l~~~~~-el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 76 (409)
T PRK10090 1 LRKI-AAG--IRERAS-EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTT 76 (409)
T ss_pred CHHH-HHH--HHHCHH-HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEE
Confidence 4567 888 998888 77788899999998776642 35555431 1123466788999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+....+++++||+ ||+||+|||+.+|.++..+++++.++|+|+|++|+++|++.++++.|+.|+++++|+|
T Consensus 77 ~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~f 156 (409)
T PRK10090 77 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSM 156 (409)
T ss_pred EECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEE
Confidence 999999999999999999998 9999999999999999999999999999999999999988889999999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHH
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFC 361 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f 361 (428)
|||+++|+.|.++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 157 tGs~~~g~~v~~~aa~~~~------~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f 230 (409)
T PRK10090 157 TGSVSAGEKIMAAAAKNIT------KVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQF 230 (409)
T ss_pred ECCHHHHHHHHHHHHhcCC------eEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHH
Confidence 9999999999999999888 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy1960 362 SCFLLLFLFSAS 373 (428)
Q Consensus 362 ~~~L~~~l~~l~ 373 (428)
+++|++++++++
T Consensus 231 ~~~l~~~~~~~~ 242 (409)
T PRK10090 231 VNRLGEAMQAVQ 242 (409)
T ss_pred HHHHHHHHHhcC
Confidence 999999999864
|
|
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=385.17 Aligned_cols=249 Identities=13% Similarity=0.001 Sum_probs=214.8
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch----
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS---- 178 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~---- 178 (428)
..+.++ ++++++|+ ||+.|++++.++|. ++|+++ +++ ++++.+ ....+...++|++..+.+..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~-------~iL~~~-a~~--l~~~~~-ela~~~~~E~Gk~~~~~~~~~~~~ 72 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQID-------KIVKAI-VDA--AYENAV-KLAKMANEETGFGKWEDKVIKNVF 72 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHhCCChHHHHHHHHHH
Confidence 356778 99999999 99999999999999 999999 999 999987 66666788999997654431
Q ss_pred ---hhhhhhc----------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHH-
Q psy1960 179 ---ALTFYLE----------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIY- 243 (428)
Q Consensus 179 ---~l~~~~~----------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~- 243 (428)
.+..+.. +.+...+.++.|+|||++|+|||||.....+++++||+ ||+||+|||+.+|.++..++
T Consensus 73 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~ 152 (488)
T TIGR02518 73 AATIVYDSIKDMKTIGILSEDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVK 152 (488)
T ss_pred HHHHHHHHHhhCcccceecCCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHH
Confidence 1111111 11223466788999999999999999999999999998 99999999999999999854
Q ss_pred ---HHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEE
Q psy1960 244 ---KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFI 320 (428)
Q Consensus 244 ---~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV 320 (428)
++++++|+|+|++|++++.+.+.++.|+.||+|++|+||||+++++.+ +++.+ |+++|+|||||+||
T Consensus 153 ~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~~~~------pv~~e~gGn~p~iV 222 (488)
T TIGR02518 153 LMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA----YSSGT------PAIGVGPGNGPAYI 222 (488)
T ss_pred HHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HHcCC------CEEEEcCCCCeEEE
Confidence 455799999999999999888899999999999999999999966443 44455 89999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHH-------HhcCCc
Q psy1960 321 HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLF-------LFSASV 374 (428)
Q Consensus 321 ~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~-------l~~l~v 374 (428)
++|||+|+|++.+++|+|.++||.|++.+|+|||+++||+|+++|+++ .+++++
T Consensus 223 ~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~~~v 283 (488)
T TIGR02518 223 ERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEAEKL 283 (488)
T ss_pred eCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHHHhh
Confidence 999999999999999999999999999999999999999999999998 666554
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-45 Score=376.07 Aligned_cols=246 Identities=15% Similarity=0.106 Sum_probs=208.5
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCC----CCccc------
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQP----FGGGR------ 176 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp----~~~~~------ 176 (428)
++ ++++++|+ +|+.|+.+|..+|. ++|+++ +++ ++++.+ ....+...+.|++ ..+++
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~d~g~~~~~g~~~~~~~~~~~ 72 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKN-------RALLAI-ADA--LEANAA-EILAANAKDLAAARANGLSAAMLDRLLL 72 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHHHHHHHcCCCHHHHHHhcC
Confidence 46 89999999 99999999999999 999999 999 999887 5555555443333 12211
Q ss_pred --------chhhhhhhcc-------------c-cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCc
Q psy1960 177 --------MSALTFYLEV-------------L-ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSD 233 (428)
Q Consensus 177 --------~~~l~~~~~~-------------~-~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~ 233 (428)
.+.+++++.. . +...+.++.|+|||++|+||| | ....+++++||+ ||+||+|||+
T Consensus 73 ~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~ 150 (417)
T PRK00197 73 TEARIEGIAEGLRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGS 150 (417)
T ss_pred CHHHHHHHHHHHHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecCh
Confidence 1234444320 1 113467788999999999997 5 566788999998 9999999999
Q ss_pred cchHHHHHHHHHH----HHcCCCCccEEEeeCCC-hhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 234 TALLSNYTIYKIM----IEAGVPPGVVNFVPADG-PVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 234 ~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g-~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
.+|+++..+++++ .++|+|+|++|+++|++ .++++.|..||++++|+||||+++|+.+++++ ++ |+
T Consensus 151 ~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~------~~ 221 (417)
T PRK00197 151 EAIHSNRALVAVIQEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TV------PV 221 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CC------CE
Confidence 9999999998885 68999999999999644 55788899999999999999999999998864 34 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceE
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVF 377 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~ 377 (428)
++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|+++++++++.+.
T Consensus 222 ~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~ 289 (417)
T PRK00197 222 IEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAEAGVELR 289 (417)
T ss_pred EeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHHCCCeEe
Confidence 9999999999999999999999999999999999 9999999999999999999999999999987654
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-45 Score=374.37 Aligned_cols=243 Identities=15% Similarity=0.062 Sum_probs=205.6
Q ss_pred HHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH------hcCCCCCc----------
Q psy1960 112 SALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV------VGQQPFGG---------- 174 (428)
Q Consensus 112 ~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l------~~gkp~~~---------- 174 (428)
..+++|+ +|..|+.+|.++|. ++|+++ +++ |+++++ ....+... ++|++...
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~e 70 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKN-------AALLAI-ADA--LEANRD-EILEANAKDLAAAREAGLSEALLDRLLLTPER 70 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHhchH-HHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHH
Confidence 5788999 99999999999999 999999 999 998887 44444433 33443210
Q ss_pred cc--chhhhhhhc--------------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchH
Q psy1960 175 GR--MSALTFYLE--------------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALL 237 (428)
Q Consensus 175 ~~--~~~l~~~~~--------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl 237 (428)
.. .+.+++++. +.+...+.++.|+|||++|+|| +| ....++++|||+ ||+||+|||+.+|+
T Consensus 71 v~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~ 148 (406)
T cd07079 71 IEAMAEGLRQVAALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALH 148 (406)
T ss_pred HHHHHHHHHHHHhcCCCCcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhh
Confidence 00 134455431 0012345678899999999997 56 567789999998 99999999999999
Q ss_pred HHHHHHHHHH----HcCCCCccEEEeeCCCh-hhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEec
Q psy1960 238 SNYTIYKIMI----EAGVPPGVVNFVPADGP-VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGEC 312 (428)
Q Consensus 238 ~a~~l~~ll~----eAGlP~gvv~vv~g~g~-~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lEl 312 (428)
++..++++++ ++|+|+|++|+++|++. ++++.|..||++++|+||||+++|+.|++++ ++ |+++|+
T Consensus 149 ~~~~l~~~~~~~l~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~------pv~lEL 219 (406)
T cd07079 149 SNRALVEIIQEALEEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TI------PVIKHG 219 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CC------CEEeec
Confidence 9999999987 89999999999998654 6788999999999999999999999998776 45 899999
Q ss_pred CCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceE
Q psy1960 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVF 377 (428)
Q Consensus 313 GGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~ 377 (428)
|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++.+..++
T Consensus 220 GGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~~ga~~~ 283 (406)
T cd07079 220 DGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALREAGVELR 283 (406)
T ss_pred CCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHHCCCEEe
Confidence 999999999999999999999999999999 9999999999999999999999999999886643
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=370.46 Aligned_cols=236 Identities=12% Similarity=0.072 Sum_probs=202.7
Q ss_pred Hh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHH------HHHhcCCCC------Ccccc------
Q psy1960 117 VS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKST------GSVVGQQPF------GGGRM------ 177 (428)
Q Consensus 117 A~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~------~~l~~gkp~------~~~~~------ 177 (428)
|+ ||+.|+++|.++|. ++|+++ +++ |+++.+ ....+ ...++|||. .+++.
T Consensus 1 a~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~ 69 (398)
T TIGR00407 1 AKQAANILAQLSTAEKN-------DALSKI-ADG--LEAQAP-AILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIA 69 (398)
T ss_pred ChhHHHHHHhCCHHHHH-------HHHHHH-HHH--HHhChH-HHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHH
Confidence 46 88999999999999 999999 999 999987 54455 678999993 12222
Q ss_pred hhhhhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHH
Q psy1960 178 SALTFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242 (428)
Q Consensus 178 ~~l~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l 242 (428)
+.+++++.. .+...+.++.|+|||++|+||| | ...+++++|||+ ||+||+|||+.+|+++..+
T Consensus 70 ~~~~~~a~~a~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l 147 (398)
T TIGR00407 70 DGVKDVIELADPVGKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKAL 147 (398)
T ss_pred HHHHHHhcCCCCCcccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHH
Confidence 345665521 1224467789999999999997 7 557788999998 9999999999999999999
Q ss_pred HHH----HHHcCCCCccEEEeeCCC-hhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCce
Q psy1960 243 YKI----MIEAGVPPGVVNFVPADG-PVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317 (428)
Q Consensus 243 ~~l----l~eAGlP~gvv~vv~g~g-~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~ 317 (428)
+++ +.++|+|+|++|+++|++ .++++.|..||+|++|+||||+++|+.+.+.. .+ |+++|+|||||
T Consensus 148 ~~~~~~al~eaGlP~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~------~~~~e~gGk~p 218 (398)
T TIGR00407 148 VEVIQDALAQTGLPVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TI------PVLGHGDGICH 218 (398)
T ss_pred HHHHHHHHHHcCCChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CC------CEEEecCCcce
Confidence 999 559999999999999854 45889999999999999999999999887642 23 89999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcc
Q psy1960 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVP 375 (428)
Q Consensus 318 ~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~ 375 (428)
+||++|||+|.|++.+++++|. +||.|++.+|+|||+++||+|+++|++.++++++.
T Consensus 219 ~iV~~dADl~~Aa~~iv~~~~~-~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~~ 275 (398)
T TIGR00407 219 IYLDESADLIKAIKVIVNAKTQ-RPSTCNAIETLLVNKAIAREFLPVLENQLLEKGVT 275 (398)
T ss_pred EEEeCCCCHHHHHHHHHhhhcC-CCCcccccceEEEeHHHHHHHHHHHHHHHHhcCCE
Confidence 9999999999999999999996 49999999999999999999999999999988753
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=396.34 Aligned_cols=246 Identities=11% Similarity=0.061 Sum_probs=216.6
Q ss_pred EEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch-
Q psy1960 102 KFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS- 178 (428)
Q Consensus 102 ~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~- 178 (428)
+....+.++ ++|+++|+ ||+.|+++|.++|. ++|+++ +++ ++++.+ ....+...++|||+.+++..
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~il~~~-a~~--l~~~~~-~la~~~~~EtGk~~~e~~~~~ 73 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVD-------KIVRAA-ALA--ALDARI-PLAKMAVEETGRGVVEDKVIK 73 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHHCCChHHHHHHH
Confidence 345678889 99999999 99999999999999 999999 999 999988 77788899999998776541
Q ss_pred ------hhhhhh-c---------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHH
Q psy1960 179 ------ALTFYL-E---------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYT 241 (428)
Q Consensus 179 ------~l~~~~-~---------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~ 241 (428)
..+++. . ......+.++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~ 153 (862)
T PRK13805 74 NHFASEYIYNSYKDEKTVGVIEEDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIA 153 (862)
T ss_pred HHHHHHHHHHHhcCCCcccccCcCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHH
Confidence 111111 1 01123456678999999999999999999999999998 999999999999999999
Q ss_pred HHHHHH----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCce
Q psy1960 242 IYKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317 (428)
Q Consensus 242 l~~ll~----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~ 317 (428)
++++++ ++|+|+|++|+++|.+.+.++.|+.|+++++|+||||++++ +.++++++ |+++|+|||||
T Consensus 154 ~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~----~~a~~~~~------pv~~e~gGk~p 223 (862)
T PRK13805 154 AAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMV----KAAYSSGK------PALGVGAGNVP 223 (862)
T ss_pred HHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHH----HHHHhcCC------CeEEECCCCCe
Confidence 999875 68999999999999778889999999999999999999864 44556666 89999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHH
Q psy1960 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLF 368 (428)
Q Consensus 318 ~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~ 368 (428)
+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++
T Consensus 224 ~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~ 274 (862)
T PRK13805 224 AYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH 274 (862)
T ss_pred EEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998775
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-42 Score=355.92 Aligned_cols=241 Identities=12% Similarity=0.026 Sum_probs=211.9
Q ss_pred HHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-------------c----
Q psy1960 116 IVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-------------M---- 177 (428)
Q Consensus 116 aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-------------~---- 177 (428)
+|+ ||+.|+++|.++|. ++|+++ +++ ++++.+ ....+...+.||++.+.. .
T Consensus 2 ~A~~a~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~ 70 (397)
T cd07077 2 SAKNAQRTLAVNHDEQRD-------LIINAI-ANA--LYDTRQ-RLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNI 70 (397)
T ss_pred hHHHHHHHHHhcCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHH
Confidence 578 99999999999999 999999 999 999988 777778888998854322 1
Q ss_pred hhhhhhhc----------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 178 SALTFYLE----------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 178 ~~l~~~~~----------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+.+++++. +.....+.++.|+|||++|+|||||+. .++++++||+ ||+||+|||+.+|+++..+.+++
T Consensus 71 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~ 149 (397)
T cd07077 71 DTERGITASVGHIQDVLLPDNGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLF 149 (397)
T ss_pred HHHHHHHHhcCcccceEecCCCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHH
Confidence 23445442 111235678889999999999999999 9999999998 99999999999999999999999
Q ss_pred HHc---CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCC
Q psy1960 247 IEA---GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHAS 323 (428)
Q Consensus 247 ~eA---GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~d 323 (428)
.++ |+|+++++++++.+.++++.|+.||++++|+||||+++++.+.+.+. .+ |+++|+||||++||++|
T Consensus 150 ~~~~~~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~------~~~~~~gg~~~~iv~~d 221 (397)
T cd07077 150 QAADAAHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HI------PVIGFGAGNSPVVVDET 221 (397)
T ss_pred HHHhhcCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CC------ceEEecCCcceEEEcCC
Confidence 987 99999999999877788999999999999999999999999877663 34 89999999999999999
Q ss_pred CCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceE
Q psy1960 324 ANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVF 377 (428)
Q Consensus 324 ADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~ 377 (428)
||+|.|++.+++++|.| ||.|++++|+|||++++|+|+++|++++++.+..+.
T Consensus 222 ad~~~a~~~~~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~~G~~~~ 274 (397)
T cd07077 222 ADEERASGSVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVP 274 (397)
T ss_pred CCHHHHHHHHHHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHhcCcCcC
Confidence 99999999999999999 999999999999999999999999999988443333
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=375.84 Aligned_cols=243 Identities=16% Similarity=0.105 Sum_probs=208.7
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHH------HHhcC--CCCCccc--
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTG------SVVGQ--QPFGGGR-- 176 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~------~l~~g--kp~~~~~-- 176 (428)
.. +.++++|+ ||+.|+++|..+|. ++|+++ +++ |+++.+ ....+. ..++| ||+.+++
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~-------~~L~~~-a~~--l~~~~~-ela~~~~~d~~~~~E~G~~k~~~~~~~~ 362 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERK-------KILLDV-ADA--LEANEE-LIKAENELDVAAAQEAGYEKSLVSRLTL 362 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHhHHHHHHhCCchhHHHHHhc
Confidence 35 99999999 99999999999999 999999 999 999887 544443 56889 8865432
Q ss_pred --------chhhhhhhccc--------------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCc
Q psy1960 177 --------MSALTFYLEVL--------------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSD 233 (428)
Q Consensus 177 --------~~~l~~~~~~~--------------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~ 233 (428)
.+.++|++... ....+.++.|+|||++|+||| |+... ++++|||+ ||+||+|||+
T Consensus 363 ~~~ev~~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse 440 (718)
T PLN02418 363 KPGKIASLAASIRQLADMEDPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGK 440 (718)
T ss_pred cHHHHHHHHHHHHHHhcCccccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCc
Confidence 13456665410 111356788999999999999 99888 89999999 9999999999
Q ss_pred cchHHHHHHHHHHHHcCCCCcc----EEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEE
Q psy1960 234 TALLSNYTIYKIMIEAGVPPGV----VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309 (428)
Q Consensus 234 ~apl~a~~l~~ll~eAGlP~gv----v~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~ 309 (428)
.+|+++..++++++++ +|+|+ +|+++| +.++++.|..||+|++|+||||++. +.+.++++++ |++
T Consensus 441 ~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g-~~~~g~~L~~~~~v~~V~FTGSt~~---i~~~aa~~~k------~v~ 509 (718)
T PLN02418 441 EAARSNAILHKVITDA-IPKTVGGKLIGLVTS-RDEIPDLLKLDDVIDLVIPRGSNKL---VSQIKASTKI------PVL 509 (718)
T ss_pred cchHHHHHHHHHHHHH-ccccCCcceEEEeCC-cHHHHHHHhhCCCCCEEEEeCCHHH---HHHHHHhcCC------CEE
Confidence 9999999999999999 99996 999998 5678999999999999999999965 4444555666 899
Q ss_pred EecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH-HHHHHHHHHhcCCcce
Q psy1960 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF-CSCFLLLFLFSASVPV 376 (428)
Q Consensus 310 lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~-f~~~L~~~l~~l~v~~ 376 (428)
+|+|||||+||++|||+|.|++.+++++|.| ||.|++.+|+|||+++||+ .+..+.+...+.+..+
T Consensus 510 lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~G~~~~~i~~a~~~Ga~l 576 (718)
T PLN02418 510 GHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQNGGLNDLLVALRSAGVTL 576 (718)
T ss_pred EeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEeccccccccHHHHHHHHHHCCCEE
Confidence 9999999999999999999999999999999 9999999999999999998 6677777777777666
|
|
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-42 Score=354.41 Aligned_cols=247 Identities=24% Similarity=0.359 Sum_probs=221.2
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFY 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~ 183 (428)
+++++.|+ +++.|+.++.++|. ++|.++ +++ +.++.+ ....+...++|++..+...+ .++++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~-------~~l~~~-~~~--l~~~~~-~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~ 69 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERA-------AILRKL-ADL--LEERRE-ELAALETLETGKPIEEALGEVARAADTFRYY 69 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999 99999999999999 999999 999 998887 67777888999987544332 23333
Q ss_pred hc-------------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc
Q psy1960 184 LE-------------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA 249 (428)
Q Consensus 184 ~~-------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA 249 (428)
.. ........++.|+|||++|+|||||+...++.+++||+ ||+||+|||+.+|.++..+.++|+++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~a 149 (432)
T cd07078 70 AGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEA 149 (432)
T ss_pred HHHHHHhcCccccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 21 01223455667889999999999999999999999998 99999999999999999999999999
Q ss_pred CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHH
Q psy1960 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESV 329 (428)
Q Consensus 250 GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~A 329 (428)
|+|+|++++++|++.++++.|+.|++++.|.||||+++++.|.+.++++++ |+++|+||||++||++|+|++.|
T Consensus 150 g~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~------~~~~e~gg~~~~iV~~~ad~~~a 223 (432)
T cd07078 150 GLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLK------RVTLELGGKSPLIVFDDADLDAA 223 (432)
T ss_pred CCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccC------cEEEecCCCCeeEECCCCCHHHH
Confidence 999999999999877789999999999999999999999999999998877 89999999999999999999999
Q ss_pred HHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 330 VNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 330 a~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
++.+++++|.++||.|++++++|||++++|+|+++|+++++++++
T Consensus 224 a~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~L~~~l~~~~~ 268 (432)
T cd07078 224 VKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKV 268 (432)
T ss_pred HHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHHHHHHHHccCc
Confidence 999999999999999999999999999999999999999998763
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-40 Score=336.21 Aligned_cols=272 Identities=23% Similarity=0.314 Sum_probs=229.7
Q ss_pred HHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc---
Q psy1960 116 IVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE--- 185 (428)
Q Consensus 116 aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~--- 185 (428)
+|+ +++.|+.++.++|. ++|+++ +++ +.++.+ ....+...++|+++.+++.+ .++++..
T Consensus 2 ~a~~a~~~w~~~~~~~R~-------~~l~~l-~~~--l~~~~~-~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~ 70 (367)
T cd06534 2 AARAAFKAWAALPPAERA-------AILRKI-ADL--LEERRE-ELAALETLETGKPIEEALGEVARAIDTFRYAAGLAD 70 (367)
T ss_pred hHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 577 89999999999999 999999 999 998887 67777888999987765432 3444332
Q ss_pred ----------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCc
Q psy1960 186 ----------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254 (428)
Q Consensus 186 ----------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~g 254 (428)
..+.....++.|+|||++|+|||||+...++.+++||+ ||+||+|||+.+|+++..+.+++.++|+|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~ 150 (367)
T cd06534 71 KLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPG 150 (367)
T ss_pred HhcCCcccccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcC
Confidence 11233456677899999999999999989999999998 9999999999999999999999999999999
Q ss_pred cEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHH
Q psy1960 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTI 334 (428)
Q Consensus 255 vv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv 334 (428)
++++++|++++.++.|+.|++++.|+||||+++++.|.+.++++++ |+++|+||+|++||++|||+|.|++.++
T Consensus 151 ~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~------~~~~e~~g~~~~iV~~~ad~~~aa~~i~ 224 (367)
T cd06534 151 VVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLK------PVTLELGGKSPVIVDEDADLDAAVEGAV 224 (367)
T ss_pred eEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCC------eEEEEcCCCCeEEECCCCCHHHHHHHHH
Confidence 9999999887789999999999999999999999999999998877 8999999999999999999999999999
Q ss_pred HHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEEEeehhhhcccccccCCcccccchHHHHHHhh
Q psy1960 335 RSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFCFCSCFLLLFLFSTSVPVFCFCSCFLLLFLFS 409 (428)
Q Consensus 335 ~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (428)
+++|.++||.|++++++|||++++|+|+++|+..+....- ....+---.|.|-++.+.|.+.-|.+++..
T Consensus 225 ~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~l~tl~~~~~~-----~~~~~~~E~fgPv~~v~~~~~~~eai~~~n 294 (367)
T cd06534 225 FGAFFNAGQICTAASRLLVHESIYDEFVEKLVTVLVDVDP-----DMPIAQEEIFGPVLPVIRFKDEEEAIALAN 294 (367)
T ss_pred HHHHhcCCCCCCCCcEEEEcHHHHHHHHHhhceeeeCCCC-----CCccccCCccCceEEEEecCCHHHHHHHHh
Confidence 9999999999999999999999999999999811111000 001111122666677777888888888764
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >KOG2456|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-39 Score=319.50 Aligned_cols=241 Identities=13% Similarity=0.108 Sum_probs=209.3
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch-------hhh-
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS-------ALT- 181 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~-------~l~- 181 (428)
++.++.+| +|..-++.|.+-|. ..|+++ ..+ +++|.+ ....+...+-+++-.++... .++
T Consensus 5 ~~~v~~~R~~F~sGrtr~~efR~-------~QL~~L-~r~--i~e~e~-~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~ 73 (477)
T KOG2456|consen 5 SETVRRLRLAFSSGRTRPLEFRK-------QQLEAL-YRM--IQENEK-EIIEALAADLHKPELESYLNEVGYVLNEIRY 73 (477)
T ss_pred HHHHHHHHHHHhcCCcCChHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 56688999 99999999999999 999999 999 998876 54445555555654433321 111
Q ss_pred -------hhhc--------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 182 -------FYLE--------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 182 -------~~~~--------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
|..+ +.....+.+..|+|||++|+|||||+.+.+.++++||+ ||+||+||||.+|.++..++++
T Consensus 74 ~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakl 153 (477)
T KOG2456|consen 74 ALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKL 153 (477)
T ss_pred HHHhhHHhccccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHH
Confidence 2111 11245677888999999999999999999999999999 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
+-+. ++.+.+.+|.|.-+++++ |+.| +.|.|.||||+.+|+.|+.+++++++ |+++|+|||||++|++|+|
T Consensus 154 lp~Y-ld~~~~~VV~Ggv~ETt~-LL~~-rfD~IfyTGsp~VgkIim~aAaKhLT------PvtLELGGKsP~~vd~~~d 224 (477)
T KOG2456|consen 154 LPQY-LDQDLIRVVNGGVPETTE-LLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLT------PVTLELGGKSPCYVDKNCD 224 (477)
T ss_pred HHHh-cCcceEEEecCCCchHHH-HHHh-hccEEEecCCchHHHHHHHHHHhcCC------cEEEEcCCCCCeeecCCcC
Confidence 9999 999999999997666555 5555 89999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFS 371 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~ 371 (428)
++-|++.|+|++|.|+||.|.|++.++++++++++++++++..+++
T Consensus 225 ~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~e 270 (477)
T KOG2456|consen 225 LKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKE 270 (477)
T ss_pred HHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999986
|
|
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=354.15 Aligned_cols=237 Identities=15% Similarity=0.099 Sum_probs=198.1
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------------
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------------ 177 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------------ 177 (428)
+..+++|+ ||..|+.+|.++|. ++|+++ +++ |+++.+ .. ..+.||++.+++.
T Consensus 289 ~~~~~~A~~A~~~w~~~~~~~R~-------~~L~~l-a~~--l~~~~e-ei----~~e~gkdl~~a~~~~~~~~~~~el~ 353 (715)
T TIGR01092 289 RDMAVAARESSRMLQALSSEQRK-------EILHDI-ADA--LEDNED-EI----LAENKKDVAAAQGAGYAASLVARLS 353 (715)
T ss_pred HHHHHHHHHHHHhhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HH----HHHHhhhHHHHHhcCcchhHHHHHh
Confidence 77788999 99999999999999 999999 999 998876 22 1355566543221
Q ss_pred ----------hhhhhhhccc--------------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCC
Q psy1960 178 ----------SALTFYLEVL--------------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPS 232 (428)
Q Consensus 178 ----------~~l~~~~~~~--------------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs 232 (428)
+.+++++... ....+.++.|+|||++|+||| |+.. .+++++||+ ||+||+|||
T Consensus 354 ~~~~ei~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKps 431 (715)
T TIGR01092 354 MSPSKISSLAISLRQLAAMEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGG 431 (715)
T ss_pred CCHHHHHHHHHHHHHHhcCCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCc
Confidence 1245554210 111245678999999999999 9888 589999998 999999999
Q ss_pred ccchHHHHHHHHHHHHcCCCCc----cEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 233 DTALLSNYTIYKIMIEAGVPPG----VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 233 ~~apl~a~~l~~ll~eAGlP~g----vv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+.+|+++..++++++++ +|+| ++|++++ ++++++.|..||++++|+||||+++|+.|+++++ + |+
T Consensus 432 e~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~-~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~------pv 500 (715)
T TIGR01092 432 KEAARSNAILHKVITEA-IPIHVGKKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---I------PV 500 (715)
T ss_pred ccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCC-hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---C------CE
Confidence 99999999999999999 9987 6899985 5678899999999999999999999999998864 4 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH-HHHHHHHHHhcCCcce
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF-CSCFLLLFLFSASVPV 376 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~-f~~~L~~~l~~l~v~~ 376 (428)
++|+|||||+||++|||+|.|++.++.++|.+ ||.|+|++|+|||++++|+ .++++.+.+.+.+..+
T Consensus 501 ~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~~~~~~~v~~~~~~Ga~l 568 (715)
T TIGR01092 501 LGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRNGLLDDLIDMLRTEGVTI 568 (715)
T ss_pred EEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccchhHHHHHHHHHHCCCEE
Confidence 99999999999999999999998887777766 9999999999999999997 6677777777654443
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-39 Score=321.30 Aligned_cols=264 Identities=17% Similarity=0.205 Sum_probs=227.1
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~~~ 140 (428)
+||||+++.+++..+.. .+||.+ +.+|++++.++..| ++|+.+|+ ||. +|++++.++|. +
T Consensus 424 ~fi~g~fv~~~~~~t~~--------tinp~~-~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg-------~ 487 (881)
T KOG2452|consen 424 LFIGGEFVDAEGAKTSE--------TINPTD-GSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRG-------R 487 (881)
T ss_pred hccCcEeecccCCcccc--------ccCCCC-CCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhh-------h
Confidence 69999999998887654 689998 89999999999999 99999999 985 59999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcc-------cchhhhhhhc----------------cccccceeeecc
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-------RMSALTFYLE----------------VLASNLGRGEGL 197 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~-------~~~~l~~~~~----------------~~~~~~~~~~~p 197 (428)
.+.++ +++ ++++++ +.+.++.++.|....-+ ..+.+||+++ +...-.++.++|
T Consensus 488 ~~y~l-a~l--me~h~e-elat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~ep 563 (881)
T KOG2452|consen 488 LMYRL-ADL--MEQHQE-ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEP 563 (881)
T ss_pred hhhhc-cch--hhhccc-hhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCc
Confidence 99999 999 999998 77777777777543222 2256777764 112235788999
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
.|||++|+|||||+.+..|+.++.|+- ...++.+ -.|++|+++|+|.-+|+.|..||+++
T Consensus 564 igv~g~i~pwnyplmmlswk~aaclaa----------------~~~k~~e----~sgvini~~gsgslvg~rls~hpdvr 623 (881)
T KOG2452|consen 564 VGVCGIIIPWNYPLMMLSWKTAACLAA----------------QVLKFAE----LTGVVNVLPGSGSLVGQRLSDHPDVR 623 (881)
T ss_pred ceeEEEeccCCchHHHHHHHHHHHHHH----------------HHhhhhh----hcceEEEecCCcchhccccccCCccc
Confidence 999999999999999999998776541 1112222 25789999999999999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
.|-||||+++|+.+++.|+..-. +++.+|+||++|.||+.|||+++|++..+.+.|++.|..|.+.-|+||.+||
T Consensus 624 kigftgsteig~~im~sca~sni-----kkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~si 698 (881)
T KOG2452|consen 624 KIGFTGSTEVGKHIMKSCAISNV-----KKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSI 698 (881)
T ss_pred eeccccchHHHHHHHHHHhhcch-----heeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhh
Confidence 99999999999999999986422 3899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+.++++.+++.+
T Consensus 699 hd~fv~~~vee~~~~~ 714 (881)
T KOG2452|consen 699 HDEFVRRVVEEVRKMK 714 (881)
T ss_pred hHHHHHHHHHHHHhhc
Confidence 9999999999999865
|
|
| >KOG2454|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=313.47 Aligned_cols=265 Identities=18% Similarity=0.192 Sum_probs=230.5
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
.+.|.+ ++-++.++.-++.| |+-|..|+ ||++|.+.+...|+ +.|+.+ .+. +-+|.+ ........+
T Consensus 68 CycPat-g~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr-------~fL~~L-~~y--Ii~nQd-liaevacrD 135 (583)
T KOG2454|consen 68 CYCPAT-GKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRR-------QFLRIL-LKY--IIENQD-LIAEVACRD 135 (583)
T ss_pred EecCCC-cceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHH-------HHHHHH-HHH--Hhhchh-heeeeeecc
Confidence 578998 89999999999999 99999999 99999999999999 888888 666 777776 334445677
Q ss_pred cCCCCCcccc-------hhhhhhhccc-----------c-----ccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRM-------SALTFYLEVL-----------A-----SNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~-------~~l~~~~~~~-----------~-----~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
+||.+-++.. |.+.|....+ + .-..+..+|+||+++|.|||||+...+.++.+||-
T Consensus 136 tGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFs 215 (583)
T KOG2454|consen 136 TGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFS 215 (583)
T ss_pred cCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhc
Confidence 8888766544 2334433211 0 01233345689999999999999999999999997
Q ss_pred CCEEEEeCCccchHHHHHHHHHHH----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI 299 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~ 299 (428)
||++|+|-|+.+..+.....++++ ..|-|++++|++++-. +++++|+.|+++++|.|.||..+++.|++.+++.+
T Consensus 216 GNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclp-d~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~L 294 (583)
T KOG2454|consen 216 GNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLP-DTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTL 294 (583)
T ss_pred CCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCc-chHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhc
Confidence 999999999999999987777655 4499999999999954 78999999999999999999999999999999999
Q ss_pred CcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 300 NVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 300 ~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+ |+++|+|||+++||.+|||++..+..++++.|..+||.|.+.+|++||+++||.|+..|-++++.+|
T Consensus 295 T------Pv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r 362 (583)
T KOG2454|consen 295 T------PVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVR 362 (583)
T ss_pred C------cEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999999999999999999999866
|
|
| >KOG2453|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-38 Score=299.71 Aligned_cols=318 Identities=20% Similarity=0.179 Sum_probs=259.2
Q ss_pred HHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhh
Q psy1960 53 LKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGL 130 (428)
Q Consensus 53 l~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~ 130 (428)
|+++.-+..+...|. |+|-.++.... ..+|++ .++|++|..++.+| +.+++.|+ |.+.|...|...
T Consensus 11 lkelglte~n~gvy~-gkw~a~g~vv~----------t~~pan-n~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapk 78 (507)
T KOG2453|consen 11 LKELGLTENNAGVYH-GKWAASGQVVQ----------TFAPAN-NSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPK 78 (507)
T ss_pred HHHhCCcccccceee-eeeccCCceeE----------eecCCC-CChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 466655545555555 58877665544 679999 68999999999999 99999999 999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhc-------------cccccc
Q psy1960 131 LINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLE-------------VLASNL 191 (428)
Q Consensus 131 R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~-------------~~~~~~ 191 (428)
|. +|.+.+ .|. |+.+.+ .+-.+..+++||-..+... |.++|... .++...
T Consensus 79 rg-------eivrqi-gda--lr~klq-~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghal 147 (507)
T KOG2453|consen 79 RG-------EIVRQI-GDA--LRTKLQ-NLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHAL 147 (507)
T ss_pred cc-------hHHHHH-HHH--HHHHHH-HHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhH
Confidence 99 999999 999 988776 6666778899988765543 23333322 122334
Q ss_pred eeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH----HHHcCCCCccEEEeeCCChhh
Q psy1960 192 GRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI----MIEAGVPPGVVNFVPADGPVF 266 (428)
Q Consensus 192 ~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l----l~eAGlP~gvv~vv~g~g~~~ 266 (428)
+..+.|+|+|++|+.||||-..-.|.-+-|+. ||+|+|||++++|+++...-++ +.+-.+|++......| +.++
T Consensus 148 leqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG-~aDi 226 (507)
T KOG2453|consen 148 LEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG-GADI 226 (507)
T ss_pred HHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc-chhh
Confidence 56677899999999999997666666666776 9999999999999988755554 5555799998888877 6789
Q ss_pred hhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccc
Q psy1960 267 GDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCS 346 (428)
Q Consensus 267 g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~ 346 (428)
++++..+.+++.+.||||+++++.+..+..++.. ++.+|+||+|++||.+|||+..++..++.++...+||+|+
T Consensus 227 grAaakdgRvnlvsftGssQvgKsvgq~vqarfg------k~llelggnnaiiv~edadl~lvvps~lfaavgtagqrct 300 (507)
T KOG2453|consen 227 GRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFG------KLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCT 300 (507)
T ss_pred hhhccccCceeecccccchhhhhHHHHHHHHHhh------hHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchh
Confidence 9999999999999999999999999999988877 7999999999999999999999999999999999999999
Q ss_pred cCceEEEeCCchHHHHHHHHHHHhcCCcceEEEeehhhhccc--ccccCCcccccchHHHHHHhhcccce
Q psy1960 347 ACSRMYVPESLFCFCSCFLLLFLFSASVPVFCFCSCFLLLFL--FSTSVPVFCFCSCFLLLFLFSASVPV 414 (428)
Q Consensus 347 a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (428)
.++|+++|+++||+.+++|++.-++.++ |.| -+|-.+|+|-+ +-...|.++|-+
T Consensus 301 t~rrl~~hesvyd~vlerlkkayaq~~i-----------gnpld~ntl~gplht~---qav~~f~~~vee 356 (507)
T KOG2453|consen 301 TTRRLIVHESVYDQVLERLKKAYAQFEI-----------GNPLDSNTLIGPLHTQ---QAVGKFKASVEE 356 (507)
T ss_pred hhhHHHhhHHHHHHHHHHHHHHHHheec-----------CCcCCCCceeccccCH---HHHHHHHHHHHH
Confidence 9999999999999999999999988662 334 35566777754 334445555443
|
|
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=269.47 Aligned_cols=172 Identities=16% Similarity=0.140 Sum_probs=154.2
Q ss_pred cceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCC----ccEEEe--eCC
Q psy1960 190 NLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFV--PAD 262 (428)
Q Consensus 190 ~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~----gvv~vv--~g~ 262 (428)
..+..+.|+|++++|+|||||+ ..++.+++||+ ||++|+|||+.+|.++..+.+++.++ +|+ +.++++ +|+
T Consensus 105 ~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~g~ 182 (422)
T cd07080 105 GGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWPGG 182 (422)
T ss_pred CCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEecCC
Confidence 3455667799999999999999 68888899998 99999999999999999999999999 787 888888 576
Q ss_pred ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCC-ceeEEcCCC----CHHHHHHHHHHHH
Q psy1960 263 GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK-NFHFIHASA----NVESVVNGTIRSA 337 (428)
Q Consensus 263 g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGk-n~~iV~~dA----Dld~Aa~~iv~sa 337 (428)
+.++++.|..++ |+|+||||+++++.|.+.++.+ +.++|+||| +++|++++| |++++++.+++++
T Consensus 183 ~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--------~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~ 252 (422)
T cd07080 183 DAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--------CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDI 252 (422)
T ss_pred chHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--------CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHH
Confidence 666899999987 9999999999999999988754 358999999 566666678 9999999999999
Q ss_pred hhcCCCccccCceEEEeCCc---hHHHHHHHHHHHhcCC
Q psy1960 338 FEYCGQKCSACSRMYVPESL---FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 338 f~~~GQ~C~a~srv~V~~si---~d~f~~~L~~~l~~l~ 373 (428)
|.|+||.|++++++|||+++ +++|.++|.++++++.
T Consensus 253 ~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~~~ 291 (422)
T cd07080 253 CRYDQQACSSPQVVFVEKDDDEELREFAEALAAALERLP 291 (422)
T ss_pred HHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999998753
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=187.04 Aligned_cols=246 Identities=13% Similarity=0.096 Sum_probs=187.9
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccc-hhHHHHHHHhcCC--CCCcccchhhhhh---
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYY-INDKSTGSVVGQQ--PFGGGRMSALTFY--- 183 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~-~~~~~~~~l~~gk--p~~~~~~~~l~~~--- 183 (428)
.+..+.|+ |......++.++|. +.|.++ ++. |+.+.+ +..+....++..+ -++++..+.+...
T Consensus 6 ~~~~~~Ak~A~~~La~~st~~Kn-------~aL~a~-A~~--L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~R 75 (417)
T COG0014 6 EELGKRAKAASRKLATLSTEEKN-------RALLAM-ADA--LEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSR 75 (417)
T ss_pred HHHHHHHHHHHHHHhhcChhhHH-------HHHHHH-HHH--HHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHH
Confidence 56677888 88889999999999 889998 888 887665 1222222222221 1222222211110
Q ss_pred -------------------------hccccccceeeecccceEEEECCCchhhhhhHhhhhh--hcC-CCEEEEeCCccc
Q psy1960 184 -------------------------LEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTP--ALM-GSSVLWKPSDTA 235 (428)
Q Consensus 184 -------------------------~~~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iap--ALa-GN~VVlKPs~~a 235 (428)
.-+.+......|.|+||+++| |....-+..-+. +|. ||+||+|.+..+
T Consensus 76 i~~ma~gl~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI----YEsRPnVtvdaaaLclKsGNAvILRGGsea 151 (417)
T COG0014 76 IEAMADGLRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI----YESRPNVTVDAAALCLKSGNAVILRGGSEA 151 (417)
T ss_pred HHHHHHHHHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE----EecCCccHHHHHHHHHhcCCEEEEeCcHHH
Confidence 012345567778899999999 543322222333 455 999999999999
Q ss_pred hHHHHHHHHHHH----HcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEE
Q psy1960 236 LLSNYTIYKIMI----EAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG 310 (428)
Q Consensus 236 pl~a~~l~~ll~----eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~l 310 (428)
..++..++++++ ++|+|.+.+|+++.. .+++.+.|..+..||.|+..||...-+.+.+.+ + .|++.
T Consensus 152 ~~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~-----vPVi~ 222 (417)
T COG0014 152 IHSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----T-----VPVIE 222 (417)
T ss_pred hhhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----c-----CCEEe
Confidence 999999888766 559999999999874 556677778888999999999988666664443 3 27888
Q ss_pred ecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEEEe
Q psy1960 311 ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFCFC 380 (428)
Q Consensus 311 ElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~~~ 380 (428)
..-|++.++|+.+||+|+|.+-+++++..+.+ .|++.+.++||+.+.++|+.+|.+.+.+.+|.++|=.
T Consensus 223 ~~~G~CHiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~gvelr~d~ 291 (417)
T COG0014 223 HGVGNCHIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEAGVELRGDA 291 (417)
T ss_pred cCcceEEEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhcCeEEEcCH
Confidence 88899999999999999999999999999998 9999999999999999999999999999999999854
|
|
| >KOG4165|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.2e-17 Score=156.04 Aligned_cols=242 Identities=16% Similarity=0.126 Sum_probs=184.5
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccc-hhHHH----HHHHhcCCCCCcccch------
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYY-INDKS----TGSVVGQQPFGGGRMS------ 178 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~-~~~~~----~~~l~~gkp~~~~~~~------ 178 (428)
++..+.|| +....+.++.++|. ++|.++ +++ |..+.. +..+. +..-+.| +.+....
T Consensus 3 e~~a~~aR~a~r~LqaLs~e~R~-------~il~~i-ad~--L~~~~~~I~~aN~~Dla~Ake~G--L~~sll~RL~l~~ 70 (433)
T KOG4165|consen 3 EEMAENAREAGRILQALSNEDRA-------DILHHI-ADL--LVDNEKEILAANKKDLAEAKEAG--LAESLLKRLDLSP 70 (433)
T ss_pred HHHHHHHHHHhhHHHhcChhhHH-------HHHHHH-HHH--HHhhHHHHHhcchhhHHHHHhcC--ccHHHHHHhcCCh
Confidence 34556788 89999999999999 999999 999 887655 11111 1111222 1111110
Q ss_pred --------hhhhhhc--------------cccccceeeecccceEEEECCCchhhhh-hHhhh-hhhcC-CCEEEEeCCc
Q psy1960 179 --------ALTFYLE--------------VLASNLGRGEGLDGFVAAVSPFNFTAIG-GNLAY-TPALM-GSSVLWKPSD 233 (428)
Q Consensus 179 --------~l~~~~~--------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~-~~~~i-apALa-GN~VVlKPs~ 233 (428)
.++-.++ ..+........|+||.++| |.... .+.++ +-|++ ||.+++|...
T Consensus 71 ~K~~sl~~g~~~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVI----FESRPd~l~qiasLAi~SgN~llLKGGk 146 (433)
T KOG4165|consen 71 GKISSLAAGLRQIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVI----FESRPDCLPQIASLAIASGNGLLLKGGK 146 (433)
T ss_pred HHHHHHHHHHHHHHhcccchhhheeeeeccCCceEEEeeccceEEEEE----eccCchHHHHHHHHHHhcCCeEeecCch
Confidence 0111111 1122334556789999999 43222 11122 23556 9999999999
Q ss_pred cchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEE
Q psy1960 234 TALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309 (428)
Q Consensus 234 ~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~ 309 (428)
.+..+...|.++.++| |.|.+.+++|.. .+++.+.|-.+..||.|+..||+...|.|..... . |+.
T Consensus 147 Ea~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s-REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---I------PVL 216 (433)
T KOG4165|consen 147 EAAHSNAALHKLVQEALGTHGGPGKAVQLVTS-REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---I------PVL 216 (433)
T ss_pred hhhhhHHHHHHHHHHHhhhccCchhhhhheec-HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---C------ccc
Confidence 9999999999999888 779999999987 5688999999999999999999999888855432 2 899
Q ss_pred EecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc-hHHHHHHHHHHHhcCCcceEEE
Q psy1960 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL-FCFCSCFLLLFLFSASVPVFCF 379 (428)
Q Consensus 310 lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si-~d~f~~~L~~~l~~l~v~~~~~ 379 (428)
+.-.|.+.++|+.|||+|+|.+-+..++..|.. .|+|.+.+++|+++ ...|.+.|..++++-+|.+||=
T Consensus 217 GHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~~gVtl~ag 286 (433)
T KOG4165|consen 217 GHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKEEGVTLHAG 286 (433)
T ss_pred ccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHhcCeEEecC
Confidence 999999999999999999999999999999987 99999999999994 4579999999999999999984
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.44 E-value=1e-11 Score=127.85 Aligned_cols=170 Identities=17% Similarity=0.129 Sum_probs=137.0
Q ss_pred ceeeecccceEEEECCCchhhhhhHhhhhhhcCCCEEEEeCCccchHHHHHHHHHHHHcCCCC----ccEEEe--eCCCh
Q psy1960 191 LGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPP----GVVNFV--PADGP 264 (428)
Q Consensus 191 ~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKPs~~apl~a~~l~~ll~eAGlP~----gvv~vv--~g~g~ 264 (428)
.+..+.|.|++++|.|.|-|.......+...|+||..|+|+|+..+..+..+.+.|.+. .|. ..+.++ ++.+.
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCch
Confidence 45566778999999999999887777777677799999999999999999999999887 443 345556 56566
Q ss_pred hhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCC-CceeEEcCCCCHHHHHHHHHHHHhhcCCC
Q psy1960 265 VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG-KNFHFIHASANVESVVNGTIRSAFEYCGQ 343 (428)
Q Consensus 265 ~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGG-kn~~iV~~dADld~Aa~~iv~saf~~~GQ 343 (428)
++.+.+.+ ..|+++.+||.++.+.+.+....+. + .++-|- .+..+|+.+++++++++.+.+-.+.+.+|
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~-------~-~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~ 229 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGA-------R-LIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQ 229 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCC-------c-EeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCc
Confidence 67777764 5789999999999999987544332 2 444454 48889999999999999999999999999
Q ss_pred ccccCceEEEe---CCchHHHHHHHHHHHhc
Q psy1960 344 KCSACSRMYVP---ESLFCFCSCFLLLFLFS 371 (428)
Q Consensus 344 ~C~a~srv~V~---~si~d~f~~~L~~~l~~ 371 (428)
.|++++.+||. +.-.++|.++|.+++++
T Consensus 230 aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~ 260 (399)
T PF05893_consen 230 ACSSPQVIFVETGDGDSVEEFAERLAEALER 260 (399)
T ss_pred ccCCCeEEEEECCCcccHHHHHHHHHHHHHH
Confidence 99999999999 33456788888777664
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.55 E-value=1e-07 Score=110.01 Aligned_cols=111 Identities=16% Similarity=0.026 Sum_probs=85.0
Q ss_pred hhccccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeC
Q psy1960 183 YLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPA 261 (428)
Q Consensus 183 ~~~~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g 261 (428)
.+++++.|.+.+.+ +|++++|+||| ...+.++++||+ ||+||+||++.++- ..+.+|..+.+.+
T Consensus 1065 PGPTGEsN~L~l~~-RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~---------~~~~Lp~~~~~~~-- 1129 (1208)
T PRK11905 1065 PGPTGESNLLSLHP-RGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA---------ALADLPGLVAARI-- 1129 (1208)
T ss_pred CCCCCcceeEEecC-CceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH---------HHHhCcccccccc--
Confidence 34467888888887 79999999999 446678889998 99999999998752 1223566555554
Q ss_pred CChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCC
Q psy1960 262 DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314 (428)
Q Consensus 262 ~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGG 314 (428)
.+++.+..+++|++|.|||++++.+.+.++.+++-.+ ..|++.|..+
T Consensus 1130 ---~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~---Ivpliaet~~ 1176 (1208)
T PRK11905 1130 ---DWTQDWEADDPFAGALLEGDAERARAVRQALAARPGA---IVPLIAAEPT 1176 (1208)
T ss_pred ---ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCC---cceEEecCCC
Confidence 3456788888999999999999999999999987432 2356666653
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.60 E-value=0.02 Score=67.23 Aligned_cols=101 Identities=17% Similarity=0.098 Sum_probs=74.0
Q ss_pred hhccccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeC
Q psy1960 183 YLEVLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPA 261 (428)
Q Consensus 183 ~~~~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g 261 (428)
.+++++.|.+...+ +|+|+++++- ......+++++|+ ||.||+..++. ....+ +++|+.+.+.+.-
T Consensus 1174 PGPTGE~N~l~l~p-Rg~vLcl~~~---~~~~~~Ql~Aala~Gn~~v~~~~~~---~~~~~------~~Lp~~v~~~v~~ 1240 (1318)
T PRK11809 1174 PGPTGERNTYTLLP-RERVLCLADT---EQDALTQLAAVLAVGSQALWPDDAL---HRALV------AALPAAVQARIQL 1240 (1318)
T ss_pred CCCCCCcceeeccC-CCcEEEeCCC---HHHHHHHHHHHHHhCCEEEEeCCch---hHHHH------HhccHHHHhHhhh
Confidence 34567889888887 7999999872 3356788888998 99999874443 22222 5799998887633
Q ss_pred CChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccC
Q psy1960 262 DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNIN 300 (428)
Q Consensus 262 ~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~ 300 (428)
. ......+..+++|.|-|..+..+.+.++.+++-.
T Consensus 1241 ~----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~G 1275 (1318)
T PRK11809 1241 A----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDG 1275 (1318)
T ss_pred c----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCC
Confidence 2 1222334579999999999999999999988755
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.029 Score=52.88 Aligned_cols=56 Identities=13% Similarity=0.020 Sum_probs=47.6
Q ss_pred ceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 316 n~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
.-+||++|.|++.|+..++.+.-.--| ..+...|+|||++.|+|+++++.+++.+.
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl~ 61 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPLS 61 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccCC
Confidence 458999999999999999999855443 34778899999999999999988877665
|
The function of this family is unknown. |
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=81.89 E-value=4.3 Score=42.22 Aligned_cols=121 Identities=33% Similarity=0.491 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCC-------CCeeEEEEeCCCHhH-HHHHH
Q psy1960 44 KEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHN-------HKKKIAKFYYATPVL-KSALD 115 (428)
Q Consensus 44 ~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~-------~g~~ia~v~~a~~~~-~~Av~ 115 (428)
+.-+++++.|+..++. .++.++.||+..++.+++..||+.+ +.+|.+ .| ++..|..-.+.. +++++
T Consensus 392 ~sF~rl~k~le~ak~~-~~leiL~GGk~DdS~G~FV~PTiv~----~kdP~~pim~ee~fG-PvLsVyvY~Dd~~~E~l~ 465 (561)
T KOG2455|consen 392 KSFARLKKVLEHAKKD-PELEILAGGKCDDSTGYFVEPTIVL----SKDPKDPIMTEEIFG-PVLSVYVYEDDKFDEVLK 465 (561)
T ss_pred HHHHHHHHHHHhhccC-ccceeeecCcccCCCCeeecceEEE----ccCCCcchhhhhccC-ceeEEEEeccccHHHHHH
Confidence 3455677888887764 4478899999999999998888754 456655 23 344444444444 77777
Q ss_pred HHhccCccccC---ChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch
Q psy1960 116 IVSSLCPYEKN---SVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS 178 (428)
Q Consensus 116 aA~A~~~W~~~---~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~ 178 (428)
.+.....+..+ -.++|. .+++++..++.-..|..+++.........+|+..+|++
T Consensus 466 lv~~tt~YaLTGaiFaqd~~--------vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~S 523 (561)
T KOG2455|consen 466 LVDNTTPYALTGAIFAQDRE--------VVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLS 523 (561)
T ss_pred HHhcCCcceeccccccccHH--------HHHHHHHHHHhhhcceEEccccccceeeccccCccccc
Confidence 77622223332 345555 44444133311233444566677777777888877764
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 428 | ||||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 6e-79 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 9e-79 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-78 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-78 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 5e-20 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 8e-20 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 1e-19 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 2e-18 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-18 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 8e-18 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-16 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 2e-15 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-15 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 4e-15 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 1e-14 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 1e-14 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 2e-14 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 3e-14 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 4e-14 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 6e-14 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 6e-14 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 7e-14 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 1e-13 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 5e-13 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 6e-13 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 8e-13 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 1e-12 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 1e-12 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 2e-12 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 3e-12 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 4e-12 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 4e-12 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 4e-12 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 4e-12 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 5e-12 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 5e-12 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 6e-12 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 8e-12 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 1e-11 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-11 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 1e-11 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 2e-11 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-11 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 3e-11 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 3e-11 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 4e-11 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 5e-11 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 5e-11 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 6e-11 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 6e-11 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 8e-11 | ||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-10 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 1e-10 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 2e-10 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-10 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 2e-10 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 3e-10 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 4e-10 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 5e-10 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 1e-09 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-09 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-09 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 2e-09 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-09 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-08 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 1e-08 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-08 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 5e-08 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 7e-08 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 8e-08 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 9e-08 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 3e-07 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 3e-07 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 6e-07 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 2e-06 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 4e-06 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 5e-06 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 9e-05 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 1e-04 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 2e-04 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-04 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 3e-04 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 5e-04 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 7e-04 |
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 303 bits (779), Expect = 3e-98
Identities = 116/162 (71%), Positives = 144/162 (88%)
Query: 196 GLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
GL+GFVAA+SPFNFTAIGGNLA PALMG+ VLWKPSDTA+L++Y +Y+I+ EAG+PP +
Sbjct: 199 GLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNI 258
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+ FVPADGP FGDT+T+S +L GINFTGSVPTF LW QV +N++ ++ FPRL GECGGK
Sbjct: 259 IQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGK 318
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
NFHF+H+SA+V+SVV+GT+RSAFEY GQKCSACSR+YVP+SL
Sbjct: 319 NFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSL 360
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 74.6 bits (184), Expect = 1e-14
Identities = 32/72 (44%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 110 LKSALDIVSSLCPYEKNSVGLLINTEVLH---DDLYFRCLDDLKYAAGNYYINDKSTGSV 166
+ L +V S Y GL T + + L+ AAGN+YINDKSTGSV
Sbjct: 463 YRETLKLVDSTTSY-----GL---TGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSV 514
Query: 167 VGQQPFGGGRMS 178
VGQQPFGG R S
Sbjct: 515 VGQQPFGGARAS 526
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 68.4 bits (168), Expect = 1e-12
Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94
P + GS ER+A+ ALK + E +P V+G +E T +QYQ P
Sbjct: 36 PILAFSQGSPERDALQKALKDLKGQTEAIPCVVGDEEVWTS----------DIQYQLSPF 85
Query: 95 NHKKKIAKFYYATPVL-KSALD 115
NH K+AKF YA L A+D
Sbjct: 86 NHAHKVAKFCYADKALLNRAID 107
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 212 bits (542), Expect = 2e-63
Identities = 77/354 (21%), Positives = 131/354 (37%), Gaps = 61/354 (17%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTV-EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMP 93
P + + R+A AL V + +E P++I + TE + P
Sbjct: 10 PFTDFTVEA-NRKAFEEALGLVEKELGKEYPLIINGERVTTE--DKIQSWN--------P 58
Query: 94 HNHKKKIAKFYYATPVL--------KSALDIVSSLCPYEKNSV------------GLLIN 133
+ + A L A ++ P E+ ++
Sbjct: 59 ARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNVNPEERANILVKAAAIIRRRKHEFSA 118
Query: 134 TEVL---------HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYL 184
V D +D L+Y A + + G++ FY
Sbjct: 119 WLVHEAGKPWKEADADTA-EAIDFLEYYAR--QM-IELNR---GKEILSRPGEQNRYFY- 170
Query: 185 EVLASNLGRGEGLDGFVAAVSPFNFT-AIGGNLAYTPALMGSSVLWKPSDTALLSNYTIY 243
+ G +SP+NF AI A P + G++V+ KP+ T +
Sbjct: 171 ----------TPM-GVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFV 219
Query: 244 KIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303
+++ +AG+P GV+N+VP G GD + P + I FTGS RL+ +
Sbjct: 220 EVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQN 279
Query: 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
+ R+I E GGK+ + A+++ + SAF + GQKCSA SR + + +
Sbjct: 280 HLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 1e-08
Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 10/44 (22%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMS----------ALTFYLEV 186
GN Y N TG++VG PFGG +MS L +++
Sbjct: 466 VGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 159 bits (403), Expect = 2e-42
Identities = 59/161 (36%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 199 GFVAAVSPFNF-TAI-GGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G A ++P+NF AI G + A++ G+ V++KPS + + + ++ EAG+P GV
Sbjct: 668 GVAAVIAPWNFPLAISMGMAS--AAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGV 725
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
NF P G V GD + P ++ I FTGS+ T R+ + K N ++I E GGK
Sbjct: 726 FNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGK 785
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
N I A+++ V + SAF + GQKCSACSR+ V ++
Sbjct: 786 NAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDA 826
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 10/44 (22%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMS----------ALTFYLEV 186
GN YIN +TG++V +QPFGG RMS L +++
Sbjct: 960 VGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDP 1003
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 150 bits (380), Expect = 2e-40
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Query: 199 GFVAAVSPFNF-TAI-GGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G ++P+NF AI G + + G++V+ KP++ A++ +++I EAG PPGV
Sbjct: 175 GAGVVIAPWNFPVAIFTGMIV--GPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGV 232
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
VNF+P G G + P + INFTGS+ +++ G+ F R E GGK
Sbjct: 233 VNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGK 292
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
N + +A+ + G + SA+ + GQKCSA SR+ + +
Sbjct: 293 NAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQG 333
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 7e-07
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 10/44 (22%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMS----------ALTFYLEV 186
GN Y N K TG++VG QPFGG ++S L +LE+
Sbjct: 466 VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 1e-36
Identities = 50/159 (31%), Positives = 73/159 (45%), Gaps = 5/159 (3%)
Query: 199 GFVAAVSPFNF-TAIGGNLAYTPALMGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G A+SP+NF AI + G+SV+ KP++ ++ EAG+P +
Sbjct: 651 GVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALY 710
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
V DG + G +TA P +AG+ FTGS + + LI E GG N
Sbjct: 711 LVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIV---PLIAETGGINA 766
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
A+A E V + + SAF GQ+CSA ++V E
Sbjct: 767 MIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQED 805
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 2e-08
Identities = 25/76 (32%), Positives = 30/76 (39%), Gaps = 20/76 (26%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEG----LDGFVAAVSPF- 207
GN Y+N G+VVG QPFGG +S G G L F +
Sbjct: 937 VGNIYVNRNMIGAVVGVQPFGGNGLSG-----------TGPKAGGPHYLARFATEQTVTI 985
Query: 208 NFTAIGGNLAYTPALM 223
N A GGN AL+
Sbjct: 986 NTAAAGGN----AALL 997
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-29
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLAYT----PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPP 253
G V A+SPFN+ NLA PAL+ G++V++KP+ LS + + + +AG P
Sbjct: 154 GVVLAISPFNYPV---NLA-AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPE 209
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG 313
G++ V G V GD + P + I FTG G+ I+ ++ E G
Sbjct: 210 GIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTT--------TGERISEKAKMIPVVLELG 261
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK+ + A+++ + + AF Y GQ+C+A R++V +S+
Sbjct: 262 GKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 4e-29
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 199 GFVAAVSPFNFTAIGGNLAYT----PALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPP 253
G V A+SPFN+ NLA PAL+ G+ + +KP +S + + EAG+P
Sbjct: 145 GLVLAISPFNYPV---NLA-GSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPA 200
Query: 254 GVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG 313
GV N + G GD I + INFTGS +G+ I ++ E G
Sbjct: 201 GVFNTITGRGSEIGDYIVEHQAVNFINFTGSTG--------IGERIGKMAGMRPIMLELG 252
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK+ + A++E I AF Y GQ+C+A R+ V ES+
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVA 297
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 114 bits (289), Expect = 4e-28
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 17/166 (10%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G VA P+NF G++ PAL G+ V++KPS+ K I+AG+P GV
Sbjct: 141 GVVAVFGPYNFPGHLPNGHIV--PALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGV 198
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGEC 312
+N V G + A L G+ FTGS G ++ + L E
Sbjct: 199 LNLVQGGRET-GVALAAHRGLDGLFFTGSSR--------TGNLLHSQFGGQPQKILALEM 249
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GG N + A++++ V I+SAF GQ+C+ R+ VP+ +
Sbjct: 250 GGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAW 295
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 7e-28
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 14/166 (8%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 256
G V +SP+NF + PAL +G++V+ KP+ DT + +I EAGVP GV+
Sbjct: 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVI 209
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI----NVYKNFPRLIGEC 312
+ V G GD I+FTGS P VG+ + + E
Sbjct: 210 STVAGAGSEIGDHFVTHAVPKLISFTGSTP--------VGRRVGELAINGGPMKTVALEL 261
Query: 313 GGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GG + A A++++ AF + GQ C + +R+ V ++
Sbjct: 262 GGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVH 307
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 2e-26
Identities = 45/165 (27%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 199 GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G ++P+NF LA A GS V+ KPS+ + + +I + GVP GV
Sbjct: 141 GVSGLITPWNFPTNQTSLKLA--AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGV 198
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECG 313
N V DG G+ ++ P + ++FTGS G I K+F ++ E G
Sbjct: 199 FNLVNGDGAGVGNPLSEHPKVRMMSFTGSG--------PTGSKIMEKAAKDFKKVSLELG 250
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK+ + + +++ T GQ C+A +R+ VP +
Sbjct: 251 GKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIK 295
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 4e-26
Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 16/164 (9%)
Query: 199 GFVAAVSPFNFTAIGGNLA---YTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPG 254
G VAA++PFN+ A T + + G++V+ KPS + L K +++AG PP
Sbjct: 159 GVVAAITPFNYPL---FDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPD 215
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGG 314
+ + G + I A +A ++FTGS VG+ + + + E GG
Sbjct: 216 AIALLNLPGKE-AEKIVADDRVAAVSFTGSTE--------VGERVVKVGGVKQYVMELGG 266
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + A+++ + R + Y GQ+C A + ++
Sbjct: 267 GDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVY 310
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 3e-25
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 26/173 (15%)
Query: 199 GFVAAVSPFNFTAIGGN--LAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGV-PPG 254
G ++ FNF + G A PAL+ G V+ KP+ + +++AG+ PPG
Sbjct: 153 GVALFINAFNFPSWGLWEKAA--PALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPG 210
Query: 255 VVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI----NVYKNFPRLIG 310
++ + + ++FTGS T + + RL
Sbjct: 211 ALSIICGSS---AGLLDQIRSFDVVSFTGSADT--------AATLRAHPAFVQRGARLNV 259
Query: 311 ECGGKNFHFIHASANVESV-----VNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ N + A A ++ + +R GQKC+A R +VPE+
Sbjct: 260 QADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAAL 312
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 3e-25
Identities = 50/231 (21%), Positives = 87/231 (37%), Gaps = 42/231 (18%)
Query: 141 LYFRCLDDLKYAAGN--YY--INDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEG 196
+ ++ + A Y G G L E
Sbjct: 116 PIAQARGEIGFCADLWSYAAGQARALEGQTH---NNIGDDRLGLV-----------LREP 161
Query: 197 LDGFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA 249
+ G V ++P+NF + + A+ G +V+ KPS+ ++ + ++ EA
Sbjct: 162 V-GVVGIITPWNFPFIIASERVP------WAIGSGCTVVLKPSEFTSGTSIRLAELAREA 214
Query: 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPR 307
G+P GV N V G G + P + + FTGSV +VG + + R
Sbjct: 215 GIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSV--------RVGTKLGEIAARTVKR 266
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ E GGK + A A++++ +G + GQ C + SR+ V E +
Sbjct: 267 VGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIR 317
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 20/167 (11%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPALM-GSSVLWKPSD----TALLSNYTIYKIMIEAGV 251
G V ++ FNF G N A A++ G+ LWK + ++ I K++ + +
Sbjct: 159 GLVGIITAFNFPVAVYGWNNA--IAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKL 216
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLI 309
P + + + G + + ++FTGS VGK + V + F R +
Sbjct: 217 PGAICSLTCGGADI-GTAMAKDERVNLLSFTGSTQ--------VGKQVGLMVQERFGRSL 267
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
E GG N A++ VV + +A GQ+C+ R+++ ES
Sbjct: 268 LELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHES 314
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 4e-25
Identities = 53/171 (30%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA-- 249
G V A++PFNF I PA+ G+ ++ PS A L + KI+ A
Sbjct: 132 GIVGAITPFNFPLNLSAHKIA------PAIATGNVIVHHPSSKAPLVCIELAKIIENALK 185
Query: 250 --GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307
VP GV N + G V GD I + + I+FTGS VG+ I F +
Sbjct: 186 KYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSK--------VGELITKKAGFKK 237
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ E GG N + + A++ VN I+ +F Y GQ C + + V ES+
Sbjct: 238 IALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 6e-25
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 199 GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V ++P+N+ + + PAL G +++ KPS+ A LS +I+ EA +P GV
Sbjct: 163 GVVGLITPWNWPMNQVTLKVI--PALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGV 220
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECG 313
N + DG G ++A P L I+FTGS + GK+I N R+ E G
Sbjct: 221 FNLINGDGANVGSYLSAHPDLEMISFTGST--------RAGKDISKNASNTLKRVCLELG 272
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK + I A A+++++ G +R F GQ C+A +RM V ++++
Sbjct: 273 GKGANIIFADADIDALQRG-VRHCFYNSGQSCNAPTRMLVEQAIY 316
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-24
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPS-DTALLSNYTIYKIMIEAGVPPGVV 256
G ++++SPFNF + PA+ +G+SV+ KP TA+ I K AG+P GV+
Sbjct: 145 GVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVL 204
Query: 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGG 314
N + D GD + +P I+FTGS VG++I + F R+ E GG
Sbjct: 205 NVMLTDVKEIGDGMLTNPIPRLISFTGSTA--------VGRHIGEIAGRAFKRMALELGG 256
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
N + + A+V+ V+ I F + GQ C +R+ V + +
Sbjct: 257 NNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDV 299
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 17/171 (9%)
Query: 199 GFVAAVSPFNF----TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEA---- 249
G VA NF +A GG+ A AL G V+ K ++ + + + +A
Sbjct: 138 GPVAVFGASNFPLAFSAAGGDTA--SALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQE 195
Query: 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309
+P + + + G + + P + + FTGSV L+ + +
Sbjct: 196 QLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFY---- 251
Query: 310 GECGGKNFHFIHASANVE--SVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GE G N FI SA + + + S CGQ C+ ++ +
Sbjct: 252 GELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPE 302
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-24
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 145 CLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAV 204
+ +Y AG + DK G+ + R LT + E + G V
Sbjct: 141 SIQTFRYFAG--WC-DKIQGATIPINQARPNRNLTLT-----------KKEPV-GVCGIV 185
Query: 205 SPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
P+N+ + L G++V+ KP+ L+ ++ ++AG+P GVVN
Sbjct: 186 IPWNYPLMMLSWKTA------ACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRLIGECGG 314
+P G + G ++ P + I FTGS VGK+I N ++ E GG
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTE--------VGKHIMKSCALSNVKKVSLELGG 291
Query: 315 KNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
K+ I A ++ V + S F G+ C A R++V ES+
Sbjct: 292 KSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIH 335
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 7e-24
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 199 GFVAAVSPFNF--TAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V A+ +N +A PAL G +++ KP+ L+ + ++ E G+P GV
Sbjct: 148 GVVGAIVAWNVPLFLAVNKIA--PALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGV 205
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECG 313
++ VP G G +T++P + FTGS VG+ + + E G
Sbjct: 206 LSVVPG-GIETGQALTSNPDIDMFTFTGSS--------AVGREVGRRAAEMLKPCTLELG 256
Query: 314 GKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GK+ I ++ + + + S GQ C +R+ P S +
Sbjct: 257 GKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-23
Identities = 51/223 (22%), Positives = 83/223 (37%), Gaps = 38/223 (17%)
Query: 145 CLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAV 204
+Y A + +K + E + G V +
Sbjct: 114 VAGCFEYYAD---LAEKLDARQKAPVSLPMDTFKSHV-----------LREPI-GVVGLI 158
Query: 205 SPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
+P+N+ + PAL G + + KPS+ A L+ + +I E G+PPGV+N
Sbjct: 159 TPWNYPMLMATWKVA------PALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLN 212
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGK 315
+ GP G + P + + FTGS T G I + + E GGK
Sbjct: 213 ILTGLGPEAGAPLATHPDVDKVAFTGSSAT--------GSKIMTAAAQLVKPVSLELGGK 264
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ + +++ I F GQ CSA SR+ + ES+
Sbjct: 265 SPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIA 307
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 4e-23
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 199 GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G V ++P+N + I PAL G++V+ KP++ + + + +I+ EA +
Sbjct: 164 GPVGIITPWNAPLMLSTWRIA------PALAFGNTVVLKPAEWSPFTATKLAEILKEADL 217
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLI 309
PPGV N V G G + A P + + TG T GK + + RL
Sbjct: 218 PPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETET--------GKIVMRNAADHLKRLS 269
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK+ + A A++E ++ + F + G++C+A SR+ V E +F
Sbjct: 270 PELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 4e-23
Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE----AG 250
G VA + P T I ++ G+S+++ P AL + +I+ E AG
Sbjct: 110 GVVAGLIPSTNPTSTVIY-KTL--ISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAG 166
Query: 251 VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG 310
P G ++ + D + A I TG + K Y + IG
Sbjct: 167 CPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGS--------AMVKAA--YSSGTPAIG 216
Query: 311 ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
G FI SAN+ V + S G C++ + V
Sbjct: 217 VGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERV 262
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 5e-23
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 24/170 (14%)
Query: 199 GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G + P+NF A +G PAL G+ V+ K ++ L+ + ++ EAG
Sbjct: 160 GVCGQIIPWNFPLLMQAWKLG------PALATGNVVVMKVAEQTPLTALYVANLIKEAGF 213
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRL 308
PPGVVN VP GP G I + + + FTGS ++G+ I V N R+
Sbjct: 214 PPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGST--------EIGRVIQVAAGSSNLKRV 265
Query: 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK+ + I + A+++ V + F GQ A SR +V E ++
Sbjct: 266 TLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 315
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 99 bits (250), Expect = 6e-23
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 24/170 (14%)
Query: 199 GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G + P+NF IG PAL G++V+ KP++ L+ + ++ EAG
Sbjct: 161 GVCGQIIPWNFPLLMFLWKIG------PALSCGNTVVVKPAEQTPLTALHMGSLIKEAGF 214
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY---KNFPRL 308
PPGVVN VP GP G I++ + + FTGS +VGK I N R+
Sbjct: 215 PPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGST--------EVGKLIKEAAGKSNLKRV 266
Query: 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK+ + A A++++ V + F + GQ C A SR++V ES++
Sbjct: 267 SLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 98.4 bits (246), Expect = 2e-22
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 41/223 (18%)
Query: 145 CLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAV 204
+ Y AG + DK G ++ + E + G V +
Sbjct: 136 IHNVFMYFAG---LADKDGGEMI---DSPIPDTESKI-----------VKEPV-GVVTQI 177
Query: 205 SPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
+P+N+ + I PAL G S++ KPS+ L+ ++++M E G P G +N
Sbjct: 178 TPWNYPLLQASWKIA------PALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTIN 231
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGK 315
+ G GD ++ + ++FTG + T GK+I N N + E GGK
Sbjct: 232 LILGAGSEVGDVMSGHKEVDLVSFTGGIET--------GKHIMKNAANNVTNIALELGGK 283
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
N + I A+ E V+ + + + GQ CSA SR+ V S+
Sbjct: 284 NPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIK 326
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 97.8 bits (244), Expect = 2e-22
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNF---TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----G 250
G + + P TAI +L + +++ P A S K++++A G
Sbjct: 105 GIICGIVPTTNPTSTAIF-KSL--ISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAG 161
Query: 251 VPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIG 310
P ++ ++ + + +A I TG + K Y + IG
Sbjct: 162 APKDIIGWIDQPSVELSNALMKHDDIALILATGGP--------GMVKAA--YSSGKPAIG 211
Query: 311 ECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
G I +A+++ V + S G C++ + V +
Sbjct: 212 VGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDE 257
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 97.2 bits (243), Expect = 5e-22
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 220 PAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278
PAL G+++++KPS+ L I +I+IEAG+P G+ N + D G + P +A
Sbjct: 173 PALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAK 231
Query: 279 INFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGKNFHFIHASANVESVVNGTIRS 336
++ TGSVPT G+ + + + E GGK+ + A++ES V G +
Sbjct: 232 VSLTGSVPT--------GRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLG 283
Query: 337 AFEYCGQKCSACSRMYVPESLF 358
F GQ CS +R++V +
Sbjct: 284 NFYSSGQVCSNGTRVFVQKKAK 305
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 94.9 bits (237), Expect = 3e-21
Identities = 61/223 (27%), Positives = 94/223 (42%), Gaps = 43/223 (19%)
Query: 145 CLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGFVAAV 204
++Y AG + +G + GG A T R E L G A +
Sbjct: 122 AWQCIEYYAG---LAPTLSGQHI---QLPGGAF-AYT-----------RREPL-GVCAGI 162
Query: 205 SPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
+N+ A PAL G++V++KPS ++ + +I EAGVP G+VN
Sbjct: 163 LAWNYPFMIAAWKCA------PALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVN 216
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLIGECGGK 315
V G G + P +A ++FTGSVPT GK + K + E GGK
Sbjct: 217 VVQG-GAETGSLLCHHPNVAKVSFTGSVPT--------GKKVMEMSAKTVKHVTLELGGK 267
Query: 316 NFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ I +E+ V G + + F GQ C+ +R++V +
Sbjct: 268 SPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIM 310
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 94.4 bits (235), Expect = 4e-21
Identities = 39/170 (22%), Positives = 58/170 (34%), Gaps = 18/170 (10%)
Query: 199 GFVAAVSPFNF----TAIGGNLAYTPAL-MGSSVLWKPSD----TALLSNYTIYKIMIEA 249
G VA NF + GG+ A AL G V+ K T + + + +
Sbjct: 171 GPVAVFGASNFPLAFSTAGGDTA--AALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKT 228
Query: 250 GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLI 309
GV PGV + + G + P++ + FTGS+ L+
Sbjct: 229 GVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPI----PFF 284
Query: 310 GECGGKNFHFIHASANVE---SVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GE G N F+ A ++ G S GQ C+ V E
Sbjct: 285 GELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEG 334
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 7e-21
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 199 GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G V +++P+N+ A + PA+ G++V++KPS+ L+ + +++ + +
Sbjct: 163 GIVGSIAPWNYPLMMMAWKLA------PAIGGGNTVVFKPSEQTPLTALKLARLIADI-L 215
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLI 309
P GVVN + G G+ + P + ++ TG + GK + K R
Sbjct: 216 PEGVVNVITGRGETVGNALINHPKVGMVSITGDIA--------TGKKVLAAAAKTVKRTH 267
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK ++ A++E+VVNG + GQ C+A R+Y ++
Sbjct: 268 LELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIY 316
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 92.2 bits (230), Expect = 2e-20
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 199 GFVAAVSPFNF----TA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G VA+++P+N+ A + PAL G+ V+ KPS+ L+ + ++ +
Sbjct: 161 GVVASIAPWNYPLMMAAWKLA------PALAAGNCVVLKPSEITPLTALKLAELAKDI-F 213
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY--KNFPRLI 309
P GVVN + G GD +T P + ++ TGS+ T G++I + + R
Sbjct: 214 PAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT--------GEHIISHTASSIKRTH 265
Query: 310 GECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GGK + A++E+VV G + GQ C+A R+Y + ++
Sbjct: 266 MELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 89.5 bits (223), Expect = 2e-19
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G + P+NF I +A PAL G++++ KPS+ + KI+ E G+P GV
Sbjct: 144 GVTTGILPWNFPFFLIARKMA--PALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGV 201
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
N V G G + +P +A ++ TGSV ++ KNI ++ E GG
Sbjct: 202 FNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNIT------KVCLELGG- 254
Query: 316 NFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
I A++E V + S GQ C+ R+YV +
Sbjct: 255 KAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKG 296
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 85.7 bits (213), Expect = 3e-18
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 199 GFVAAVSPFNFTA--IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGV 255
G V ++ +NF G + PAL G++++ KP+ L+ + +I EAG+P GV
Sbjct: 150 GVVVGITAWNFPLALAGRKIG--PALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGV 207
Query: 256 VNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGK 315
+N + G V G T+ SP I TGS +++ + + ++ E GG
Sbjct: 208 LNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAEYMT------PVMLELGG- 260
Query: 316 NFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
+ A+++ + F CGQ C+ R+YV S
Sbjct: 261 KAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHAS 302
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 84.1 bits (209), Expect = 1e-17
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G + P+NF + AL G + KP+ L+ + +M + +
Sbjct: 149 GVTGLIVPWNFPIGMIAKKLS------AALAAGCPSVIKPASETPLTMIAFFSVMDKLDL 202
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
P G+VN V V G + + ++FTGS +L + + + K +L E
Sbjct: 203 PDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAEQV---K---KLALE 256
Query: 312 CGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GG N FI A++E+ + I + F GQ C +R++V E
Sbjct: 257 LGG-NAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEK 301
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 1e-17
Identities = 46/166 (27%), Positives = 76/166 (45%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G AA++P+NF A PAL G +++ +P+D L+ + + +AG+
Sbjct: 170 GVTAAITPWNFPAAMITRKAA------PALAAGCTMIVRPADLTPLTALALGVLAEKAGI 223
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
P GV+ V G +T++ + ++FTGS L Q I R+ E
Sbjct: 224 PAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAPTIK------RISLE 277
Query: 312 CGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GG N FI A++++ V+G + S + GQ C +R+YV
Sbjct: 278 LGG-NAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRG 322
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-17
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G AA++P+NF A +G PAL G ++ KP+++ S + + AGV
Sbjct: 150 GVCAAITPWNFPAAMIARKVG------PALAAGCPIVVKPAESTPFSALAMAFLAERAGV 203
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
P GV++ V D G IT++P + ++FTGS L Q + K +L E
Sbjct: 204 PKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAPTV---K---KLTLE 257
Query: 312 CGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GG N FI A++++ V G I S + GQ C +R +V E
Sbjct: 258 LGG-NAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHER 302
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 2e-17
Identities = 53/166 (31%), Positives = 81/166 (48%), Gaps = 21/166 (12%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G AA++P+NF A G PAL G +++ KP+ S + ++ I AGV
Sbjct: 147 GVTAAITPWNFPAAMITRKAG------PALAAGCTMVLKPASQTPFSALALAELAIRAGV 200
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311
P GV N V G+ +T++P + ++FTGS +L Q K+I K ++ E
Sbjct: 201 PAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDI---K---KVSLE 254
Query: 312 CGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356
GG N FI A+++ V G + S F GQ C +R+YV +
Sbjct: 255 LGG-NAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG 299
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-------GSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G V ++PFNF + P M G++ + KPS+ L + ++ +AG+
Sbjct: 143 GVVGGIAPFNFPMM------VPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGL 196
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY----KNFPR 307
P GV N V V + I P + I+F GS P VG+ + Y +N R
Sbjct: 197 PKGVFNVVYGAHDVV-NGILEHPEIKAISFVGSKP--------VGEYV--YKKGSENLKR 245
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
+ G KN + AN+E V + +AF G++C AC+
Sbjct: 246 VQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACA 287
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 77.6 bits (192), Expect = 1e-15
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 199 GFVAAVSPFNFTA------IGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G A ++P+NF + +G AL G +V+ KP++ S + ++ +AG+
Sbjct: 148 GVAAVITPWNFPSAMITRKVG------AALAAGCTVVVKPAEDTPFSALALAELASQAGI 201
Query: 252 PPGVVNFVPA---DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308
P GV N +P + G+ I P ++ I+FTGS T L ++ K R+
Sbjct: 202 PSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV---K---RV 255
Query: 309 IGECGGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
E GG FI SANV+ V G + S F GQ C ++ V +
Sbjct: 256 SMELGG-LAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIH 305
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 2e-15
Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-------GSSVLWKPSDTALLSNYTIYKIMIEAGV 251
G A ++PFNF + P M G++ + KPS+ + ++MIEAG+
Sbjct: 164 GIGAGITPFNFPGM------IPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGL 217
Query: 252 PPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVY----KNFPR 307
P G++N V D D I P +A ++F GS P + + + Y N R
Sbjct: 218 PAGILNVVNGDKGAV-DAILTHPDIAAVSFVGSTP--------IARYV--YGTAAMNGKR 266
Query: 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACS 349
G KN I A+++ N I + + G++C A S
Sbjct: 267 AQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAIS 308
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 71.0 bits (175), Expect = 2e-13
Identities = 45/167 (26%), Positives = 70/167 (41%), Gaps = 20/167 (11%)
Query: 199 GFVAAVSPFNF-----TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G + A+ P+NF P L+ G+S L K + I +I+ EAG P
Sbjct: 128 GVILAIMPWNFPLWQVLRGAV-----PILLAGNSYLLKHAPNVTGCAQMIARILAEAGTP 182
Query: 253 PGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGEC 312
GV +V A+ + P +A + TGSV + Q G + K + + E
Sbjct: 183 AGVYGWVNANNEGVSQ-MINDPRIAAVTVTGSVRAGAAIGAQAGAAL---K---KCVLEL 235
Query: 313 GGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
GG + FI A++E V + ++ GQ C+A R V E +
Sbjct: 236 GG-SDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIA 281
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 69.9 bits (172), Expect = 4e-13
Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 20/166 (12%)
Query: 199 GFVAAVSPFNF-----TAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVP 252
G + A P+NF + P + G+ +L K + S KI+ AG P
Sbjct: 125 GVIMACEPWNFPLYQVIRVFA-----PNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAP 179
Query: 253 PGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGEC 312
G + + D I A P + G+ TGS + + GKN+ K + E
Sbjct: 180 EGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNL---K---KSTMEL 232
Query: 313 GGKNFHFI-HASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357
GG N FI A+ + + N + GQ C++ R+ V +S
Sbjct: 233 GG-NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSR 277
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 428 | |||
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 |
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-70 Score=579.82 Aligned_cols=339 Identities=46% Similarity=0.755 Sum_probs=311.3
Q ss_pred hhhhhhhhccccCCCccCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCC
Q psy1960 15 QIEYLHFSLLILDRYNVQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPH 94 (428)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~ 94 (428)
--.|.+++++++.+++++|||+++|.++|++|+++++++++++++..++|++|||+|+.+.+... ++||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~nep~~~~~~~~~~r~~~~~a~~~~~~~~~~~~~~I~G~~~~~~~~~~----------~~~P~ 85 (563)
T 4e3x_A 16 PRGSHMLRWKHTSSLKVANEPILAFSQGSPERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQY----------QLSPF 85 (563)
T ss_dssp ----CCCCCCCCCCCCCCCCCCCCCCTTCHHHHHHHHHHHTTTTCCEECCEEETTEEECCSCEEE----------EEETT
T ss_pred cCCcccccccccCCCCcCCCCCCCCCCCcHHHHHHHHHHHHHHhCCccCCeEECCEEeecCCcee----------eeCCC
Confidence 34688899999999999999999999999999999999999988888999999999998876544 78999
Q ss_pred CCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhc-cchhHHHHHHHhcCCC
Q psy1960 95 NHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGN-YYINDKSTGSVVGQQP 171 (428)
Q Consensus 95 ~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~-~~~~~~~~~~l~~gkp 171 (428)
++++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++ ++ ....+..++.||+
T Consensus 86 ~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~-------~iL~~~-a~~--l~~~~~~-el~~~~~~e~Gk~ 154 (563)
T 4e3x_A 86 NHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRA-------QVFLKA-ADM--LSGPRRA-EVLAKTMVGQGKT 154 (563)
T ss_dssp EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHTTTHH-HHHHHHHHHHCCC
T ss_pred CCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHhccHH-HHHHHHHHHcCCC
Confidence 8779999999999999 99999999 99999999999999 999999 999 9988 66 5666677899999
Q ss_pred CCcccch-------hhhhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcCCCEEEEeC
Q psy1960 172 FGGGRMS-------ALTFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKP 231 (428)
Q Consensus 172 ~~~~~~~-------~l~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALaGN~VVlKP 231 (428)
+.+++.+ .++|++.. +..+.+.+++|+|||++|+|||||+....++++|||+||+||+||
T Consensus 155 ~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~~~~~apALaGNtVVlKP 234 (563)
T 4e3x_A 155 VIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALMGNVVLWKP 234 (563)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHHHHHHHHhhcCCEEEEEC
Confidence 8776543 45555431 123467889999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEe
Q psy1960 232 SDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311 (428)
Q Consensus 232 s~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lE 311 (428)
|+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++++++++++|+++||+++|
T Consensus 235 s~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lE 314 (563)
T 4e3x_A 235 SDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGE 314 (563)
T ss_dssp CGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEE
T ss_pred CCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceecc
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred cCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 312 CGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 312 lGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|||||+||++|||+|.|++.+++++|.|+||+|++++|+|||+++||+|+++|+++++++++
T Consensus 315 lGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l~v 377 (563)
T 4e3x_A 315 CGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKV 377 (563)
T ss_dssp CCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTCCB
T ss_pred CCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999999999998764
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-63 Score=522.73 Aligned_cols=323 Identities=20% Similarity=0.264 Sum_probs=291.4
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
.+.|||.++|. ++.+|++++++++++++. ...++++|||+|+.++.... ++||+++++++++++.++.
T Consensus 5 ~~~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~----------~~nP~t~~~~i~~~~~~~~ 73 (538)
T 3qan_A 5 PYKHEPFTDFT-VEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKIQ----------SWNPARKDQLVGSVSKANQ 73 (538)
T ss_dssp CCCCCCCCCTT-SHHHHHHHHHHHHHHHHHTTEEECEEETTEEECCSSEEE----------EECSSSTTCEEEEEECBCH
T ss_pred ccCCCcccccC-CcHHHHHHHHHHHHhhhccCcccceeECCEEecCCCeEE----------EECCCCCCcEEEEEcCCCH
Confidence 67899999998 899999999999887654 46789999999998444444 7899987899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------AL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l 180 (428)
++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||..+++.+ .+
T Consensus 74 ~dv~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l 142 (538)
T 3qan_A 74 DLAEKAIQSADEAFQTWRNVNPEERA-------NILVKA-AAI--IRRRKH-EFSAWLVHEAGKPWKEADADTAEAIDFL 142 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999988 77778899999998876643 45
Q ss_pred hhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 181 TFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 181 ~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+|++.. .+...+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~ 222 (538)
T 3qan_A 143 EYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVL 222 (538)
T ss_dssp HHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHH
Confidence 555432 1223466788899999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
.++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.++++...|+.++|+++|+|||||+||++|||+
T Consensus 223 ~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl 302 (538)
T 3qan_A 223 EDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADL 302 (538)
T ss_dssp HHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCH
T ss_pred HHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCH
Confidence 99999999999999988889999999999999999999999999999999884334444599999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 303 ~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 303 DLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999998764
|
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-62 Score=515.51 Aligned_cols=288 Identities=21% Similarity=0.276 Sum_probs=262.7
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
.+.++||||+|+++.+..+++ ++||+| ++++++++.++.+| ++||++|+ ||+.|+++|..+|.
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~------ 69 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFE--------TINPAN-GEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRS------ 69 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred CCCcEEECCeeeCCCCCCEEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH------
Confidence 456799999999876655444 899999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...++|||+.+++. +.++|++.. .....+.++.|+|
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G 144 (490)
T 2wme_A 70 -RILRRA-VDI--LRERND-ELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLG 144 (490)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECS
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEeccee
Confidence 999999 999 999988 7778888999999877654 356676541 1233567788999
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|++
T Consensus 145 Vv~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~ 224 (490)
T 2wme_A 145 VVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEK 224 (490)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCE
T ss_pred EEEEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeCChhhHHHHHHHH-hcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQV-GKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~-a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
|+||||+++|+.+++.+ +++++ |+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 225 I~FTGS~~~G~~i~~~~a~~~lk------~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i 298 (490)
T 2wme_A 225 ISFTGGTSTGKKVMASASSSSLK------EVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298 (490)
T ss_dssp EEEESCHHHHHHHHHHHHHHHCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGG
T ss_pred EEEECChHHHHHHHHhhhccCCc------eEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhH
Confidence 99999999999987754 55666 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 299 ~d~f~~~l~~~~~~l~v 315 (490)
T 2wme_A 299 QARFEAKVLERVQRIRL 315 (490)
T ss_dssp HHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHhCcC
Confidence 99999999999998653
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-61 Score=536.86 Aligned_cols=323 Identities=22% Similarity=0.323 Sum_probs=292.9
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
.+.|||.++|.. +.+|++++++++++++. ...+|++|||+|+.++.... ++||+++++++++++.++.
T Consensus 499 ~~~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~----------v~nPa~~~~~i~~v~~a~~ 567 (1026)
T 4f9i_A 499 PFNNEAMVDFTR-ADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRTNDLIP----------TVNPNKPSEVLGQICQAGT 567 (1026)
T ss_dssp CCCCCCCCCTTS-HHHHHHHHHHHHHHHTTCCEEECEEETTEEECCSCEEE----------EEETTEEEEEEEEEECCCH
T ss_pred CCCCCCCCCCCC-HHHHHHHHHHHHHHhhccccccCceECCEEecCCCcEE----------EeCCCCCCceEEEEeCCCH
Confidence 589999999986 77999999999998766 46889999999998765554 8899987899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SAL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l 180 (428)
++ ++|+++|+ |++.|+.+|.++|+ ++|+++ +++ |+++.+ ....+...+.||++.++.. +.+
T Consensus 568 ~dv~~Av~aA~~A~~~W~~~~~~eRa-------~iL~~~-Adl--l~~~~~-eLa~~~~~E~GK~~~ea~~Ev~~aid~l 636 (1026)
T 4f9i_A 568 TEVGDAIAAAKAAFPAWRDTDPRTRA-------EYLLKA-AQA--ARKRLF-ELSAWQVLEIGKQWDQAYADVTEAIDFL 636 (1026)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCChhhHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999887 7777888999999877654 456
Q ss_pred hhhhcc-------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHH
Q psy1960 181 TFYLEV-------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIM 246 (428)
Q Consensus 181 ~~~~~~-------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll 246 (428)
+|++.. .+......+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++
T Consensus 637 r~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell 716 (1026)
T 4f9i_A 637 EYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELF 716 (1026)
T ss_dssp HHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHH
Confidence 776541 1112345567799999999999999999999999998 99999999999999999999999
Q ss_pred HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCH
Q psy1960 247 IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANV 326 (428)
Q Consensus 247 ~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADl 326 (428)
+++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|++.+++....|++++|+++|+|||||+||++|||+
T Consensus 717 ~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADl 796 (1026)
T 4f9i_A 717 REAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADL 796 (1026)
T ss_dssp HHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCH
T ss_pred HHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCH
Confidence 99999999999999999999999999999999999999999999999998655445667799999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 327 ESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 327 d~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
|.|++.+++|+|.|+||+|+|++|+|||++++|+|+++|++++++++|
T Consensus 797 d~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 797 DEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999999999998763
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-60 Score=503.97 Aligned_cols=323 Identities=23% Similarity=0.278 Sum_probs=282.2
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
+|.|+|.++|... ..|+++.+++.+++.. ...++++|||+|+.++.... ++||+++++++++++.++.
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~----------~~nP~~t~~~i~~~~~~~~ 73 (516)
T 1uzb_A 5 PFRNEPIETFQTE-EARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMV----------SLNPSAPSEVVGTTAKAGK 73 (516)
T ss_dssp CCCCCCCCCCCSH-HHHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEE----------EEETTEEEEEEEEEECCCH
T ss_pred cccccccccccch-hhhhhHHHHHHHhhhhhccccceeECCEEecCCCeEE----------EECCCCCCcEEEEEeCCCH
Confidence 5799999999864 4478888888766543 34678999999997644444 7899933899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------AL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l 180 (428)
++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||+.+++.| .+
T Consensus 74 ~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~ 142 (516)
T 1uzb_A 74 AEAEAALEAAWKAFKTWKDWPQEDRS-------RLLLKA-AAL--MRRRKR-ELEATLVYEVGKNWVEASADVAEAIDFI 142 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999988 77778889999998776542 45
Q ss_pred hhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 181 TFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 181 ~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
+|++.. .+...+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l 222 (516)
T 1uzb_A 143 EYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEI 222 (516)
T ss_dssp HHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHH
Confidence 555431 0112356778899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
++++|+|+|++|+|+|++.+++++|+.||+|++|+||||+++|+.|+++++++...+++++|+++|+|||||+||++|||
T Consensus 223 ~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dAD 302 (516)
T 1uzb_A 223 FHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETAD 302 (516)
T ss_dssp HHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSC
T ss_pred HHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCC
Confidence 99999999999999998888999999999999999999999999999999832222223339999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 303 l~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 303 FDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999998763
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-59 Score=491.51 Aligned_cols=286 Identities=21% Similarity=0.266 Sum_probs=262.2
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. +
T Consensus 13 ~~~~I~G~~~~~~~~~~~~--------v~~P~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~-------~ 76 (484)
T 3ifg_A 13 HQAYIGGEWQAADSDATFE--------VFDPAT-GESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERA-------A 76 (484)
T ss_dssp CSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHH-------H
T ss_pred cceeECCEEeeCCCCCEEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 4689999999765543333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+|||
T Consensus 77 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 152 (484)
T 3ifg_A 77 ILRRW-FDL--VIANSD-DLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVC 152 (484)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEE
Confidence 99999 999 999988 7777888999999887654 356666541 122346678889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++++|+.||+|++|+
T Consensus 153 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~ 232 (484)
T 3ifg_A 153 AAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLS 232 (484)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEE
T ss_pred EEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998889999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 233 FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 306 (484)
T 3ifg_A 233 FTGSTAVGRLLMAQSAPTVK------KLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDA 306 (484)
T ss_dssp EESCHHHHHHHHHHTGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHH
T ss_pred EECCHHHHHHHHHHhhccCC------ceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 307 f~~~l~~~~~~~~~ 320 (484)
T 3ifg_A 307 FADKLAAAVSKLKV 320 (484)
T ss_dssp HHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998753
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-59 Score=492.49 Aligned_cols=288 Identities=18% Similarity=0.241 Sum_probs=263.4
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc--CccccCChhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL--CPYEKNSVGLLINTEV 136 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~--~~W~~~~~~~R~~~~~ 136 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ || +.|+.++..+|.
T Consensus 31 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~---- 97 (520)
T 3ed6_A 31 LSQRQYIDGEWVESANKNTRD--------IINPYN-QEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRG---- 97 (520)
T ss_dssp SCCSEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHH----
T ss_pred cCCceEECCEEecCCCCCEEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHH----
Confidence 356899999999865543333 789999 89999999999999 99999999 99 999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .....+..+.|
T Consensus 98 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P 170 (520)
T 3ed6_A 98 ---KKVRAI-ADK--IKEHRE-ALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEP 170 (520)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccC
Confidence 999999 999 999988 7778889999999887654 346666531 11234667888
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+.+..++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|
T Consensus 171 ~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~v 250 (520)
T 3ed6_A 171 VGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250 (520)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTC
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCc
Confidence 99999999999999999999999999 99999999999999999999999999999999999999888999999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 251 d~V~FTGS~~vG~~i~~~aa~~l~------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~ 324 (520)
T 3ed6_A 251 DLVSFTGGIETGKHIMKNAANNVT------NIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNS 324 (520)
T ss_dssp SEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHH
T ss_pred CEEEEECCHHHHHHHHHHhhhcCC------CEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 325 i~d~f~~~l~~~~~~l~v 342 (520)
T 3ed6_A 325 IKDKFEQALIDRVKKIKL 342 (520)
T ss_dssp HHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999998753
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-59 Score=492.04 Aligned_cols=284 Identities=20% Similarity=0.276 Sum_probs=261.4
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
++||||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++
T Consensus 34 ~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~-------~~ 97 (504)
T 3ek1_A 34 QCLVNGRWIDAADGTTIK--------VTNPAD-GSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERA-------GI 97 (504)
T ss_dssp SEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HH
T ss_pred CeEECCEEeeCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHH-------HH
Confidence 689999999875544433 789998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFVA 202 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV~ 202 (428)
|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+|||+
T Consensus 98 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~ 173 (504)
T 3ek1_A 98 LRKW-FDL--IIANAD-DIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTA 173 (504)
T ss_dssp HHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEE
T ss_pred HHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEE
Confidence 9999 999 999988 7778889999999887654 346666531 1123467788999999
Q ss_pred EECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEe
Q psy1960 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINF 281 (428)
Q Consensus 203 ~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~f 281 (428)
+|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++|+|
T Consensus 174 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~F 253 (504)
T 3ek1_A 174 AITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSF 253 (504)
T ss_dssp EECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEE
Confidence 999999999999999999998 9999999999999999999999999999999999999988899999999999999999
Q ss_pred eCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHH
Q psy1960 282 TGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFC 361 (428)
Q Consensus 282 TGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f 361 (428)
|||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|
T Consensus 254 TGS~~~G~~i~~~aa~~lk------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f 327 (504)
T 3ek1_A 254 TGSTEVGRLLMAQCAPTIK------RISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKF 327 (504)
T ss_dssp ESCHHHHHHHHHHHGGGTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHH
T ss_pred ECCHHHHHHHHHhhhhhcC------CeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHH
Confidence 9999999999999999888 8999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCC
Q psy1960 362 SCFLLLFLFSAS 373 (428)
Q Consensus 362 ~~~L~~~l~~l~ 373 (428)
+++|++++++++
T Consensus 328 ~~~l~~~~~~~~ 339 (504)
T 3ek1_A 328 AEKLAAKVKELK 339 (504)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHhhcc
Confidence 999999999865
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-59 Score=488.21 Aligned_cols=289 Identities=19% Similarity=0.265 Sum_probs=264.1
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
....+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~----- 75 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTID--------ILSPST-GKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQ----- 75 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEE--------EECSSS-CSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-----
T ss_pred ccccceeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 4557899999999876544433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .....+..+.|+
T Consensus 76 --~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 149 (497)
T 3k2w_A 76 --NMLRTF-ANK--IRENKH-ILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPR 149 (497)
T ss_dssp --HHHHHH-HHH--HHTTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCC
Confidence 999999 999 999988 7777888999999887654 245555431 122346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+
T Consensus 150 GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd 229 (497)
T 3k2w_A 150 GVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITK 229 (497)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEE
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 230 ~I~fTGS~~~G~~i~~~aa~~l~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 303 (497)
T 3k2w_A 230 MITMTGSTVAGKQIYKTSAEYMT------PVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASV 303 (497)
T ss_dssp EEEEESCHHHHHHHHHHHTTTTC------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTT
T ss_pred EEEEECcHHHHHHHHHHhhhcCC------CeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 304 ~d~f~~~l~~~~~~~~v 320 (497)
T 3k2w_A 304 YDEFMAKFLPLVKGLKV 320 (497)
T ss_dssp HHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999998764
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-59 Score=489.92 Aligned_cols=287 Identities=17% Similarity=0.168 Sum_probs=262.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~--------v~~P~t-g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 74 (506)
T 3rh9_A 10 ENLTGYIGGRWKDSAGGATFD--------VYNPAT-GSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRR------ 74 (506)
T ss_dssp SCCSEEETTEEECCCTTCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHH------
T ss_pred cccCeeECCEEeeCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH------
Confidence 446899999999865443333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------ccccceeee-cccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------LASNLGRGE-GLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~-~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+ .|+|
T Consensus 75 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~G 149 (506)
T 3rh9_A 75 -KWLEDI-RDG--LKENRE-EIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVG 149 (506)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECC
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccce
Confidence 999999 999 999988 7778889999999887664 245555431 123345667 8899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++
T Consensus 150 VV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~ 229 (506)
T 3rh9_A 150 VTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPM 229 (506)
T ss_dssp SEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCE
T ss_pred EEEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCE
Confidence 999999999999999999999999 9999999999999999999999999999999999999988899999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 230 I~FTGS~~vG~~i~~~aa~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 303 (506)
T 3rh9_A 230 LSFTGSTEVGRKLIVDTAEQVK------KLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVA 303 (506)
T ss_dssp EEEESCHHHHHHHHHHTTTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTH
T ss_pred EEEECCHHHHHHHHHHhhhcCC------ceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHH
Confidence 9999999999999999999888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 304 d~f~~~l~~~~~~~~ 318 (506)
T 3rh9_A 304 DAFGQKLAERVNKMT 318 (506)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999875
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-59 Score=487.66 Aligned_cols=287 Identities=18% Similarity=0.295 Sum_probs=263.3
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+...+++|||+|+.+.+. .++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~--------v~nP~t-g~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~----- 87 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEH--------ILNPRT-GAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERS----- 87 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHH-----
T ss_pred ccccCeeECCEEeeCCCC-eEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 455689999999987764 333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcc-cc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-RM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~-~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++ +. +.++|++.. .+...+..+.|
T Consensus 88 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (498)
T 4f3x_A 88 --NALLKI-ADA--IEKEAD-EFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDP 161 (498)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEE
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcC
Confidence 999999 999 999988 77778899999998877 43 345666531 12335677889
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+++|++.+++++|+.||+|
T Consensus 162 ~GVv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v 240 (498)
T 4f3x_A 162 IGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKV 240 (498)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTC
T ss_pred cceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999 99999999999988899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 241 ~~V~FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 314 (498)
T 4f3x_A 241 GMVSITGDIATGKKVLAAAAKTVK------RTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAG 314 (498)
T ss_dssp CEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETT
T ss_pred CEEEEECCHHHHHHHHHHHHhhCC------ceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 315 i~d~f~~~l~~~~~~~~v 332 (498)
T 4f3x_A 315 IYEKLVADLTSAVSTIRY 332 (498)
T ss_dssp THHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHhccc
Confidence 999999999999998753
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-58 Score=489.47 Aligned_cols=289 Identities=20% Similarity=0.228 Sum_probs=263.4
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-cc--CccccCChhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SL--CPYEKNSVGLLINTEV 136 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~--~~W~~~~~~~R~~~~~ 136 (428)
...+++|||+|+.+.+...++ ++||+++++++++++.++.++ ++|+++|+ || ..|+.++.++|.
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~---- 88 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTID--------RVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERS---- 88 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEE--------EECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHH----
T ss_pred cccceeECCEEecCCCCCEEE--------EeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHH----
Confidence 346899999999876543333 789998679999999999999 99999999 99 899999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .+...+..+.|
T Consensus 89 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 161 (528)
T 3u4j_A 89 ---RLMFKV-ADL--ILARQE-ELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREP 161 (528)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEecc
Confidence 999999 999 999988 7777889999999887653 345665431 12235677888
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|
T Consensus 162 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v 241 (528)
T 3u4j_A 162 VGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNV 241 (528)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTC
T ss_pred ceEEEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 242 d~I~FTGS~~~G~~i~~~aa~~lk------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 315 (528)
T 3u4j_A 242 DMVAFTGSVRVGTKLGEIAARTVK------RVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEG 315 (528)
T ss_dssp CEEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGG
T ss_pred CEEEEeCCHHHHHHHHHHHHhcCC------ceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEech
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 316 i~d~f~~~l~~~~~~~~~ 333 (528)
T 3u4j_A 316 IRDALMERLLDISRKVAF 333 (528)
T ss_dssp GHHHHHHHHHHHHHHCCE
T ss_pred HHHHHHHHHHHHHHhhcC
Confidence 999999999999998753
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-59 Score=487.20 Aligned_cols=287 Identities=21% Similarity=0.248 Sum_probs=262.0
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++..+|.
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 88 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLY--------VIDPST-EEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERL------ 88 (497)
T ss_dssp EECCEEETTEEECCSSCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHH------
Confidence 456899999999876644433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-ch------hhhhhhcc---------c--cccceee-ecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-MS------ALTFYLEV---------L--ASNLGRG-EGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~~------~l~~~~~~---------~--~~~~~~~-~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++ .+ .+++++.. . +...+.+ +.|+|
T Consensus 89 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~G 163 (497)
T 3i44_A 89 -GFVEKI-LEI--YEKRSS-DMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIG 163 (497)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESSTTCSSCEEEEEECC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCceeEEEeecCce
Confidence 999999 999 999988 777888999999988776 32 34444421 1 2234566 88899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|++
T Consensus 164 Vv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~ 243 (497)
T 3i44_A 164 VVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEM 243 (497)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCE
T ss_pred EEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCE
Confidence 999999999999999999999998 9999999999999999999999999999999999999988899999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|.+.++++++ |+++|+|||||+||++||| |.|++.+++++|.|+||.|++++|+|||++++
T Consensus 244 I~FTGS~~~G~~i~~~aa~~~k------~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~ 316 (497)
T 3i44_A 244 ISFTGSTRAGKDISKNASNTLK------RVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIY 316 (497)
T ss_dssp EEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGH
T ss_pred EEEeCcHHHHHHHHHHHhhcCC------ceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHH
Confidence 9999999999999999999888 8999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCc
Q psy1960 359 CFCSCFLLLFLFSASV 374 (428)
Q Consensus 359 d~f~~~L~~~l~~l~v 374 (428)
|+|+++|+++++++++
T Consensus 317 d~f~~~l~~~~~~~~v 332 (497)
T 3i44_A 317 DKAIKTAKDIAEKTQV 332 (497)
T ss_dssp HHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHhccC
Confidence 9999999999998764
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-58 Score=485.63 Aligned_cols=287 Identities=20% Similarity=0.248 Sum_probs=261.8
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-----ccccCChhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-----PYEKNSVGLLIN 133 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-----~W~~~~~~~R~~ 133 (428)
...+++|||+|+.+.+...++ ++||+| ++++++++.++.++ ++|+++|+ ||+ .|+.++..+|.
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~- 75 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIP--------VINPAT-QNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRA- 75 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHH-
T ss_pred CCCceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHH-
Confidence 345799999999875544333 789999 89999999999999 99999999 998 99999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc----------------ccccc
Q psy1960 134 TEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV----------------LASNL 191 (428)
Q Consensus 134 ~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~----------------~~~~~ 191 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++.+ .++|++.. .....
T Consensus 76 ------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 145 (503)
T 3iwj_A 76 ------RYLRAI-AAK--VTEKKP-ELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKS 145 (503)
T ss_dssp ------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEE
T ss_pred ------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccc
Confidence 999999 999 999988 77778899999998876542 45555421 11234
Q ss_pred eeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhh
Q psy1960 192 GRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTI 270 (428)
Q Consensus 192 ~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L 270 (428)
+..+.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|
T Consensus 146 ~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L 225 (503)
T 3iwj_A 146 HVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPL 225 (503)
T ss_dssp EEEEEECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHH
T ss_pred eEEEcCCceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHH
Confidence 66788899999999999999999999999998 99999999999999999999999999999999999999888899999
Q ss_pred hcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCce
Q psy1960 271 TASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSR 350 (428)
Q Consensus 271 ~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~sr 350 (428)
+.||+|++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|
T Consensus 226 ~~~~~v~~I~FTGS~~~G~~i~~~aa~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~r 299 (503)
T 3iwj_A 226 ATHPDVDKVAFTGSSATGSKIMTAAAQLVK------PVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSR 299 (503)
T ss_dssp HTCTTCCEEEEESCHHHHHHHHHHHGGGTC------CEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEE
T ss_pred hhCCCccEEEEECcHHHHHHHHHHHhcCCC------CEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCe
Confidence 999999999999999999999999999888 89999999999999999999999999999999999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhcCC
Q psy1960 351 MYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 351 v~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|||++++|+|+++|++++++++
T Consensus 300 vlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 300 LILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp EEEETTTHHHHHHHHHHHHHTCC
T ss_pred eEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999865
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-58 Score=488.50 Aligned_cols=288 Identities=19% Similarity=0.220 Sum_probs=262.4
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~----- 89 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSN--------IFNPAT-GEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA----- 89 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-----
T ss_pred hhccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 5678999999999876544433 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+
T Consensus 90 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 163 (521)
T 4e4g_A 90 --RVFMKF-VQL--LNDNMN-ELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPV 163 (521)
T ss_dssp --HHHHHH-HHH--HHHHHH-HHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCC
Confidence 999999 999 999988 7777889999999877654 345666531 112346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.+++|+.||+|+
T Consensus 164 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~~~~L~~~p~vd 242 (521)
T 4e4g_A 164 GIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDK-GAVDAILTHPDIA 242 (521)
T ss_dssp CEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCC
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCCh-HHHHHHHhCCCcC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999954 5679999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC-
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES- 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s- 356 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 243 ~I~FTGS~~vG~~i~~~aa~~lk------pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~ 316 (521)
T 4e4g_A 243 AVSFVGSTPIARYVYGTAAMNGK------RAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEE 316 (521)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHH
T ss_pred EEEEECCHHHHHHHHHHHhhcCC------CeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCch
Confidence 99999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCc
Q psy1960 357 LFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v 374 (428)
++|+|+++|+++++++++
T Consensus 317 i~d~f~~~l~~~~~~~~v 334 (521)
T 4e4g_A 317 TANRLIDKLVPMVESLRI 334 (521)
T ss_dssp HHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHHHHHhccC
Confidence 999999999999998764
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-58 Score=488.68 Aligned_cols=286 Identities=19% Similarity=0.263 Sum_probs=260.0
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|..+|.
T Consensus 37 ~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~------ 101 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYN--------TINPTD-GSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRG------ 101 (517)
T ss_dssp CSEEETTEEECCGGGCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHH------
T ss_pred CCeEECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHH------
Confidence 4689999999764333323 789999 89999999999999 99999999 998 89999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhcc----------c-----c-ccceeee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEV----------L-----A-SNLGRGE 195 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~----------~-----~-~~~~~~~ 195 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++ . +.++|++.. . . ...+..+
T Consensus 102 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~ 176 (517)
T 2o2p_A 102 -RLLYRL-ADV--MEQHQE-ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKK 176 (517)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEE
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEe
Confidence 999999 999 999988 777888899999987765 3 346666431 0 1 1236778
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||
T Consensus 177 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~ 256 (517)
T 2o2p_A 177 EPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHP 256 (517)
T ss_dssp EECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCT
T ss_pred cCCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCC
Confidence 8899999999999999999999999998 999999999999999999999999999999999999998888999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
+|++|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 257 ~v~~V~FTGS~~~G~~I~~~aa~~~lk------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V 330 (517)
T 2o2p_A 257 DVRKIGFTGSTEVGKHIMKSCALSNVK------KVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFV 330 (517)
T ss_dssp TCCEEEEESCHHHHHHHHHHHHHHTCC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHhHHhcCC------eEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEE
Confidence 9999999999999999999999 8887 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 331 ~~~i~d~f~~~l~~~~~~~~v 351 (517)
T 2o2p_A 331 EESIHNQFVQKVVEEVEKMKI 351 (517)
T ss_dssp EHHHHHHHHHHHHHHHTTCCB
T ss_pred eHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999998764
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-58 Score=483.84 Aligned_cols=286 Identities=22% Similarity=0.256 Sum_probs=259.4
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhh
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEV 136 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~ 136 (428)
..+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 20 ~~~~~i~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~---- 86 (501)
T 1bxs_A 20 YTKIFINNEWHSSVSGKKFP--------VFNPAT-EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERG---- 86 (501)
T ss_dssp CCSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH----
T ss_pred ccCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHH----
Confidence 45789999999875433323 789998 89999999999999 99999999 999 89999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeecc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGL 197 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p 197 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|++.. .+...+..+.|
T Consensus 87 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P 159 (501)
T 1bxs_A 87 ---RLLNKL-ADL--IERDRL-LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEP 159 (501)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEE
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecC
Confidence 999999 999 999988 7777888999999876432 345666531 11223567788
Q ss_pred cceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 198 DGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 198 ~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|
T Consensus 160 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v 239 (501)
T 1bxs_A 160 VGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDV 239 (501)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTC
T ss_pred CceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCc
Confidence 99999999999999999999999998 99999999999999999999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeC
Q psy1960 277 AGINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPE 355 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~ 355 (428)
++|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+
T Consensus 240 ~~I~FTGS~~~G~~i~~~aa~~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~ 313 (501)
T 1bxs_A 240 DKVAFTGSTEVGKLIKEAAGKSNLK------RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEE 313 (501)
T ss_dssp SEEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEH
T ss_pred CEEEEECCHHHHHHHHHHhhhccCC------cEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEch
Confidence 99999999999999999999 8887 8999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHhcCC
Q psy1960 356 SLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 356 si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|+++|++++++++
T Consensus 314 ~i~d~f~~~l~~~~~~~~ 331 (501)
T 1bxs_A 314 SIYDEFVRRSVERAKKYV 331 (501)
T ss_dssp HHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHhcC
Confidence 999999999999999865
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-58 Score=485.35 Aligned_cols=287 Identities=19% Similarity=0.252 Sum_probs=260.5
Q ss_pred CcccCeEEcCEEeecCCeee-eccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQY-QPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEV 136 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~-~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~ 136 (428)
+..++++|||+|+.+.+... ++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~---- 83 (503)
T 1a4s_A 17 VTDDLNYWGGRRIKSKDGATTEP--------VFEPAT-GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS---- 83 (503)
T ss_dssp CCSCCEEETTEEECCCTTCCCEE--------EECTTT-CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHH----
T ss_pred ccccceeECCEEecCCCCCceEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHH----
Confidence 34567899999997654322 23 789999 89999999999999 99999999 99999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------ccccceeeeccc
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++.. .....+..+.|+
T Consensus 84 ---~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 156 (503)
T 1a4s_A 84 ---RVMLEA-ARI--IRERRD-NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPL 156 (503)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEEC
T ss_pred ---HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecC
Confidence 999999 999 999988 7777888999999876654 345665431 112245678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++ +++++|+.||+|+
T Consensus 157 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~ 235 (503)
T 1a4s_A 157 GVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVA 235 (503)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCC
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcC
Confidence 9999999999999999999999998 9999999999999999999999999999999999999988 8999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 236 ~V~FTGS~~~G~~i~~~aa~~~~------~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 309 (503)
T 1a4s_A 236 KVSFTGSVPTGKKVMEMSAKTVK------HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREI 309 (503)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGG
T ss_pred EEEEeCCHHHHHHHHHHhhhcCC------ceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 310 ~d~f~~~l~~~~~~~~ 325 (503)
T 1a4s_A 310 MPQFLEEVVKRTKAIV 325 (503)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999875
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-58 Score=481.43 Aligned_cols=288 Identities=19% Similarity=0.212 Sum_probs=261.6
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
+..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 4 ~~~~~~~i~g~~~~~~~~~~~~--------v~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 69 (479)
T 2imp_A 4 PVQHPMYIDGQFVTWRGDAWID--------VVNPAT-EAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERA----- 69 (479)
T ss_dssp CEECCEEETTEEECCCCSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred CcccceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-----
Confidence 4567899999999764433323 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+
T Consensus 70 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 143 (479)
T 2imp_A 70 --SWLRKI-SAG--IRERAS-EISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRAL 143 (479)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEecc
Confidence 999999 999 999988 7777888999999877653 345665531 011235677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.+++++|+.||+++
T Consensus 144 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~ 223 (479)
T 2imp_A 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVA 223 (479)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEE
T ss_pred ceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 224 ~V~fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i 297 (479)
T 2imp_A 224 MVSMTGSVSAGEKIMATAAKNIT------KVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGI 297 (479)
T ss_dssp EEEEESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGG
T ss_pred EEEEeCCHHHHHHHHHHHhccCC------cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhh
Confidence 99999999999999999998888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCC
Q psy1960 358 FCFCSCFLLLFLFSAS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~ 373 (428)
+|+|+++|++++++++
T Consensus 298 ~d~f~~~l~~~~~~~~ 313 (479)
T 2imp_A 298 YDQFVNRLGEAMQAVQ 313 (479)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999875
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-58 Score=483.91 Aligned_cols=285 Identities=22% Similarity=0.248 Sum_probs=258.9
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhhh
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEVL 137 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~~ 137 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 20 ~~~~i~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~----- 85 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFP--------TVNPST-GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRG----- 85 (500)
T ss_dssp CSEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH-----
T ss_pred cCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHH-----
Confidence 3689999999864433323 789998 89999999999999 99999999 999 89999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|++.. .+...+..+.|+
T Consensus 86 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 159 (500)
T 1o04_A 86 --RLLNRL-ADL--IERDRT-YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPV 159 (500)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecC
Confidence 999999 999 999988 7778888999999876532 346666531 112235677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.||+|+
T Consensus 160 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~ 239 (500)
T 1o04_A 160 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 239 (500)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCC
T ss_pred CcEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999998888999999999999
Q ss_pred EEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|+||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 240 ~I~FTGS~~~G~~i~~~aa~~~l~------pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~ 313 (500)
T 1o04_A 240 KVAFTGSTEIGRVIQVAAGSSNLK------RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 313 (500)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred EEEEECCHHHHHHHHHhhhhhcCc------eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehh
Confidence 9999999999999999999 8887 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 314 i~d~f~~~l~~~~~~~~ 330 (500)
T 1o04_A 314 IYDEFVERSVARAKSRV 330 (500)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999999865
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-58 Score=485.26 Aligned_cols=286 Identities=20% Similarity=0.248 Sum_probs=260.0
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. +
T Consensus 27 ~~~~i~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~-------~ 90 (515)
T 2d4e_A 27 ALHFIAGEFVPSESGETFP--------SLDPAT-NEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERK-------R 90 (515)
T ss_dssp BCEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------H
T ss_pred cCeeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 5689999999865433333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-----c--------cccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-----L--------ASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-----~--------~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. + +...+..+.|+|||
T Consensus 91 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 166 (515)
T 2d4e_A 91 YLLRI-AEL--IEKHAD-ELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPV 166 (515)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCce
Confidence 99999 999 999988 7777888999999876653 245555431 0 11235677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.+++++|+.||+|++|+
T Consensus 167 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~ 246 (515)
T 2d4e_A 167 GIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLT 246 (515)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 247 FTGS~~~G~~I~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 320 (515)
T 2d4e_A 247 LTGETETGKIVMRNAADHLK------RLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFED 320 (515)
T ss_dssp EESCHHHHHHHHHHHGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHH
T ss_pred EeCcHHHHHHHHHHHhhcCC------ceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 321 f~~~l~~~~~~~~~ 334 (515)
T 2d4e_A 321 FVGKVVERARAIRV 334 (515)
T ss_dssp HHHHHHHHHHHCCB
T ss_pred HHHHHHHHHhhccc
Confidence 99999999998753
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-58 Score=481.21 Aligned_cols=284 Identities=19% Similarity=0.219 Sum_probs=259.1
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC--ccccCChhhhhhhhhhH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC--PYEKNSVGLLINTEVLH 138 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~--~W~~~~~~~R~~~~~~~ 138 (428)
.+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.++.++|.
T Consensus 9 ~~~~i~G~~~~~~~~~~~~--------~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~------ 73 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIE--------VRCPAT-GEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERA------ 73 (495)
T ss_dssp SSEEETTEEECCSSCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHH------
T ss_pred cceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHH------
Confidence 3689999999765433323 789998 89999999999999 99999999 999 99999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCccc-c------hhhhhhhccc------------cccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGR-M------SALTFYLEVL------------ASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~-~------~~l~~~~~~~------------~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++ . +.++|++... ....+..+.|+|
T Consensus 74 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~G 148 (495)
T 3b4w_A 74 -AVIAAA-VKM--LAERKD-LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVG 148 (495)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCc
Confidence 999999 999 999988 777788899999987765 3 3456665321 113466778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.+++++|+.||+|++
T Consensus 149 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~ 227 (495)
T 3b4w_A 149 VVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDM 227 (495)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCE
T ss_pred eEEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCE
Confidence 999999999999999999999998 99999999999999999999999999999999999999 8889999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 228 I~FTGS~~~G~~i~~~aa~~l~------pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 301 (495)
T 3b4w_A 228 FTFTGSSAVGREVGRRAAEMLK------PCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRY 301 (495)
T ss_dssp EEEESCHHHHHHHHHHHHHTTC------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGH
T ss_pred EEEeCCHHHHHHHHHHhhhcCC------ceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHH
Confidence 9999999999999999998888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 302 d~f~~~l~~~~~~~~ 316 (495)
T 3b4w_A 302 DEIVAAVTNFVTALP 316 (495)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999999865
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-58 Score=484.86 Aligned_cols=286 Identities=21% Similarity=0.235 Sum_probs=260.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 77 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFE--------SIFPAT-GEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARG------ 77 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH------
Confidence 456899999999766544433 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc----hhhhhhhcc----------------ccccceeeeccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM----SALTFYLEV----------------LASNLGRGEGLD 198 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~----~~l~~~~~~----------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..++.. +.++|++.. .+. .+..+.|+
T Consensus 78 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~eaev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~ 151 (517)
T 3r31_A 78 -RILKRA-ADI--MRERND-ALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPL 151 (517)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEEC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCc
Confidence 999999 999 999988 7777888999999876522 345554321 122 56778899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+| +.++++.|+.||+|+
T Consensus 152 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd 230 (517)
T 3r31_A 152 GVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVA 230 (517)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEE
T ss_pred cEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcC
Confidence 9999999999999999999999998 99999999999999999999999999999999999999 778999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 231 ~I~FTGS~~~G~~i~~~aa~~lk------~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i 304 (517)
T 3r31_A 231 KVSLTGSVPTGRKVAAAAAGHLK------HVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKA 304 (517)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGG
T ss_pred EEeccCCHHHHHHHHHHhhcCCC------cEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHH
Confidence 99999999999999999999888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 305 ~d~f~~~l~~~~~~~~~ 321 (517)
T 3r31_A 305 KARFLENLKRRTEAMIL 321 (517)
T ss_dssp HHHHHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHHHHhccC
Confidence 99999999999998653
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-58 Score=479.67 Aligned_cols=286 Identities=21% Similarity=0.301 Sum_probs=261.5
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+.+...++ ++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++.++|. +
T Consensus 10 ~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~ 73 (481)
T 3jz4_A 10 QQALINGEWLDANNGEAID--------VTNPAN-GDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERA-------T 73 (481)
T ss_dssp CSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------H
T ss_pred cceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHH-------H
Confidence 3689999999875543333 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+.++.|+|||
T Consensus 74 ~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 149 (481)
T 3jz4_A 74 ILRNW-FNL--MMEHQD-DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVT 149 (481)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEE
Confidence 99999 999 999988 7777888999999877654 345666531 122345678889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+
T Consensus 150 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~ 229 (481)
T 3jz4_A 150 AAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLS 229 (481)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 999999999999999999999999999999999999998889999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 230 fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 303 (481)
T 3jz4_A 230 FTGSTEIGRQLMEQCAKDIK------KVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDR 303 (481)
T ss_dssp EESCHHHHHHHHHHHTTTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred EECCHHHHHHHHHHHhhcCC------ceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 304 f~~~l~~~~~~~~~ 317 (481)
T 3jz4_A 304 FAEKLQQAMSKLHI 317 (481)
T ss_dssp HHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998753
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-58 Score=483.06 Aligned_cols=286 Identities=20% Similarity=0.250 Sum_probs=259.7
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
...+++|||+|+.+.+...++ ++||+| ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~--------v~nP~t-g~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~------ 74 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERIS--------ISAPAS-GVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERV------ 74 (505)
T ss_dssp EECCEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccCeeECCEEecCCCCCEEE--------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHH------
Confidence 445799999999876543333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc--------------c----cccceee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV--------------L----ASNLGRG 194 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~--------------~----~~~~~~~ 194 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. . ....+..
T Consensus 75 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 149 (505)
T 3prl_A 75 -DLLYAW-ADL--LEERKE-IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVE 149 (505)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEE
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEE
Confidence 999999 999 999988 7777888999999877654 245555431 0 1224566
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
+.|+|||++|+|||||+...+++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.+++++|+.|
T Consensus 150 ~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~ 229 (505)
T 3prl_A 150 REPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEH 229 (505)
T ss_dssp EEECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTC
T ss_pred EcCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhC
Confidence 88899999999999999999999999998 99999999999999999999999999999999999999888999999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|+|++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 230 p~vd~I~FTGS~~~G~~i~~~aa--l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 301 (505)
T 3prl_A 230 PGIDMITFTGGTTTGERISEKAK--MI------PVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFV 301 (505)
T ss_dssp TTCCEEEEESCHHHHHHHHHHCC--SS------CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEE
T ss_pred CCCCEEEEeCCHHHHHHHHHHcc--CC------cEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEE
Confidence 99999999999999999999887 66 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 302 ~~~i~d~f~~~l~~~~~~~~~ 322 (505)
T 3prl_A 302 QDSVADQLVANIKELVEQLTV 322 (505)
T ss_dssp EHHHHHHHHHHHHHHHHHCCB
T ss_pred eHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999998753
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-57 Score=479.02 Aligned_cols=284 Identities=20% Similarity=0.294 Sum_probs=259.5
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
..+++|||+|+.+.+ ..++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~--------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 85 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQP--------VYNPAT-GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA------- 85 (495)
T ss_dssp CCCEEETTEEECCCS-CEEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------
T ss_pred ccCeEECCEEecCCC-CeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------
Confidence 467999999998754 3333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc-------------ccccceeeecccc
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV-------------LASNLGRGEGLDG 199 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~-------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. ++...+..+.|+|
T Consensus 86 ~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~G 161 (495)
T 1wnd_A 86 ECLLKL-ADV--IEENGQ-VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLG 161 (495)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECS
T ss_pred HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCC
Confidence 999999 999 999988 7777888999999877654 345665531 1112356678899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++ +|+|++|+|+|++.+++++|+.||+|++
T Consensus 162 VV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~ 240 (495)
T 1wnd_A 162 VVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRM 240 (495)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEE
T ss_pred eEEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCE
Confidence 999999999999999999999998 99999999999999999999999999 9999999999988889999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++
T Consensus 241 I~FTGS~~~G~~i~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~ 314 (495)
T 1wnd_A 241 VSLTGSIATGEHIISHTASSIK------RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 314 (495)
T ss_dssp EEEESCHHHHHHHHHHHGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred EEEECcHHHHHHHHHHHHhcCC------ccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhH
Confidence 9999999999999999999888 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCC
Q psy1960 359 CFCSCFLLLFLFSAS 373 (428)
Q Consensus 359 d~f~~~L~~~l~~l~ 373 (428)
|+|+++|++++++++
T Consensus 315 d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 315 DTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999999875
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-57 Score=478.29 Aligned_cols=283 Identities=20% Similarity=0.253 Sum_probs=258.8
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHH
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDD 140 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~ 140 (428)
.+++|||+|+.+..... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. +
T Consensus 13 ~~~~i~g~~~~~~~~~~----------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~ 74 (487)
T 2w8n_A 13 TDSFVGGRWLPAAATFP----------VQDPAS-GAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERS-------S 74 (487)
T ss_dssp CSEEETTEEECCSCEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------H
T ss_pred cCeeECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------H
Confidence 57899999997763233 789998 89999999999999 99999999 99999999999999 9
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeecccceE
Q psy1960 141 LYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLDGFV 201 (428)
Q Consensus 141 iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~GVV 201 (428)
+|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+|||
T Consensus 75 ~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv 150 (487)
T 2w8n_A 75 LLRKW-YNL--MIQNKD-DLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVA 150 (487)
T ss_dssp HHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEE
T ss_pred HHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEE
Confidence 99999 999 999988 7777888999999877654 345665531 112235677889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEee---CCChhhhhhhhcCCCee
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVP---ADGPVFGDTITASPYLA 277 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~---g~g~~~g~~L~~~~~v~ 277 (428)
++|+|||||+...++++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++ |++.+++++|+.||+|+
T Consensus 151 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~ 230 (487)
T 2w8n_A 151 AVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVS 230 (487)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcC
Confidence 9999999999999999999998 9999999999999999999999999999999999999 87778999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc
Q psy1960 278 GINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL 357 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si 357 (428)
+|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++
T Consensus 231 ~V~fTGS~~~g~~i~~~aa~~~~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i 304 (487)
T 2w8n_A 231 KISFTGSTTTGKILLHHAANSVK------RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGI 304 (487)
T ss_dssp EEEEEECHHHHHHHHHHHHTTTC------EEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHH
T ss_pred EEEEeCCHHHHHHHHHHHhccCC------cEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccH
Confidence 99999999999999999998888 899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhc-CC
Q psy1960 358 FCFCSCFLLLFLFS-AS 373 (428)
Q Consensus 358 ~d~f~~~L~~~l~~-l~ 373 (428)
+|+|+++|++++++ ++
T Consensus 305 ~d~f~~~l~~~~~~~~~ 321 (487)
T 2w8n_A 305 HDAFVKAFAEAMKKNLR 321 (487)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhhcc
Confidence 99999999999998 65
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-57 Score=475.87 Aligned_cols=285 Identities=19% Similarity=0.174 Sum_probs=256.5
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
..++|.+|||+|+.++.... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 21 ~~~~~~~i~g~~~~~~~~~~----------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 84 (500)
T 2j6l_A 21 REENEGVYNGSWGGRGEVIT----------TYCPAN-NEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRG----- 84 (500)
T ss_dssp CSEEECEESSSEECCSCEEE----------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-----
T ss_pred CCCCCceECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-----
Confidence 36689999999996433333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+...+..+.|+
T Consensus 85 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~ 158 (500)
T 2j6l_A 85 --EIVRQI-GDA--LREKIQ-VLGSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPV 158 (500)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHHHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecc
Confidence 999999 999 999988 7777888999999876543 245555431 011234567889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHH----cCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIE----AGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~e----AGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.+ +|+|+|++|+|+| +.+++++|+.|
T Consensus 159 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~ 237 (500)
T 2j6l_A 159 GLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKD 237 (500)
T ss_dssp SEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHC
T ss_pred cEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcC
Confidence 9999999999999999999999998 9999999999999999999988764 6999999999999 77899999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|++++|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 238 ~~vd~I~FTGS~~~g~~i~~~aa~~l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 311 (500)
T 2j6l_A 238 ERVNLLSFTGSTQVGKQVGLMVQERFG------RSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFI 311 (500)
T ss_dssp TTCSEEEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CCcCEEEEECCHHHHHHHHHHhccCCC------ceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEE
Confidence 999999999999999999999999888 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCC
Q psy1960 354 PESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~ 373 (428)
|++++|+|+++|++++++++
T Consensus 312 ~~~i~d~f~~~l~~~~~~~~ 331 (500)
T 2j6l_A 312 HESIHDEVVNRLKKAYAQIR 331 (500)
T ss_dssp ETTTHHHHHHHHHHHHHTCC
T ss_pred cHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999865
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-57 Score=475.99 Aligned_cols=288 Identities=18% Similarity=0.189 Sum_probs=262.3
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVL 137 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~ 137 (428)
....+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~--------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~----- 75 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRIST--------NINPYD-DSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERS----- 75 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-----
T ss_pred ccccceeECCEEecCCCCCEEE--------eECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH-----
Confidence 3556899999999765543333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .+++++.. .+...+..+.|+
T Consensus 76 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~ 149 (508)
T 3r64_A 76 --AIIYRA-AEL--LEEHRE-EIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAK 149 (508)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCEEEECCSSTTEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcCcccccCCCCceeEEEEecc
Confidence 999999 999 999988 77778899999998776642 45555432 112346678889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++ ..+++++.++|+|+|++|+++|++.+++++|+.||+|
T Consensus 150 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v 229 (508)
T 3r64_A 150 GVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVP 229 (508)
T ss_dssp SEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSC
T ss_pred eEEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCc
Confidence 9999999999999999999999998 9999999999999999 9999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhc--ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 277 AGINFTGSVPTFNRLWLQVGK--NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~--~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
++|+||||+++|+.|++++++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||
T Consensus 230 d~I~fTGS~~~g~~i~~~aa~~~~l~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~ 303 (508)
T 3r64_A 230 KLISFTGSTPVGRRVGELAINGGPMK------TVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVD 303 (508)
T ss_dssp SEEEEESCHHHHHHHHHHHHSSSSCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEE
T ss_pred cEEEEECCHHHHHHHHHHhhcccCCC------ceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEe
Confidence 999999999999999999988 777 899999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCC
Q psy1960 355 ESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~ 373 (428)
++++|+|+++|++++++++
T Consensus 304 ~~i~d~f~~~l~~~~~~~~ 322 (508)
T 3r64_A 304 AAVHDEFLEKFVEAVKNIP 322 (508)
T ss_dssp HHHHHHHHHHHHHHHHTCC
T ss_pred hhHHHHHHHHHHHHHHhcc
Confidence 9999999999999999875
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-57 Score=475.49 Aligned_cols=287 Identities=21% Similarity=0.182 Sum_probs=257.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|.
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------ 69 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTED--------ILNPYD-QSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRK------ 69 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHH------
T ss_pred cccceeECCEEecCCCCCeEE--------eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH------
Confidence 346799999999765544333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc--------------ccccceeeeccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV--------------LASNLGRGEGLD 198 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~--------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...+.|||+.+++.+ .+++++.. .+...+.++.|+
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 144 (485)
T 4dng_A 70 -AVLQKA-RGY--LHENRD-DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPL 144 (485)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEEC
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecc
Confidence 999999 999 999988 77778889999998776542 45555431 112346778899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHH-HHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCe
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSN-YTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYL 276 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a-~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v 276 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++ ..+.+++.++|+|+|++|+++|++.++++.|+.||++
T Consensus 145 GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v 224 (485)
T 4dng_A 145 GVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIP 224 (485)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSC
T ss_pred eEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCC
Confidence 9999999999999999999999998 9999999999999999 9999999999999999999999888899999999999
Q ss_pred eEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 277 AGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 277 ~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
++|+||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 225 ~~v~fTGS~~~g~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~ 298 (485)
T 4dng_A 225 RLISFTGSTAVGRHIGEIAGRAFK------RMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQD 298 (485)
T ss_dssp SEEEEEECHHHHHHHHHHHHHHTC------EEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHH
T ss_pred CEEEEECCcHHHHHHHHHHhhhcc------chhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHH
Confidence 999999999999999999999888 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 299 i~d~f~~~l~~~~~~~~ 315 (485)
T 4dng_A 299 VYDEFVEKFTARVKQLP 315 (485)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcc
Confidence 99999999999999865
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-57 Score=473.95 Aligned_cols=286 Identities=19% Similarity=0.233 Sum_probs=258.5
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
..++++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|.
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~--------~~~P~t-~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------ 68 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYED--------VVNPAT-KEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA------ 68 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH------
T ss_pred cccceeECCEEecCCCCCeEE--------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH------
Confidence 457899999999765433333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-------------ccccceeeecccc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-------------LASNLGRGEGLDG 199 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-------------~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. .+...+.++.|+|
T Consensus 69 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~G 143 (486)
T 1t90_A 69 -RILFNF-QQL--LSQHKE-ELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIG 143 (486)
T ss_dssp -HHHHHH-HHH--HHTTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECS
T ss_pred -HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccC
Confidence 999999 999 999988 77778889999998766542 45555421 1123356778899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++| +.+++++|+.||+|++
T Consensus 144 VV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~ 222 (486)
T 1t90_A 144 VVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKA 222 (486)
T ss_dssp EEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEE
T ss_pred EEEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCE
Confidence 999999999999999999999998 99999999999999999999999999999999999999 4578999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCce-EEEeCCc
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSR-MYVPESL 357 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~sr-v~V~~si 357 (428)
|+||||+++|+.|+++++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++| ++||++
T Consensus 223 I~fTGS~~~g~~i~~~aa~~~~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~- 295 (486)
T 1t90_A 223 ISFVGSKPVGEYVYKKGSENLK------RVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI- 295 (486)
T ss_dssp EEEESCHHHHHHHHHHHHHTTC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-
T ss_pred EEEeCCHHHHHHHHHHHhccCC------cEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-
Confidence 9999999999999999998888 89999999999999999999999999999999999999999999 999999
Q ss_pred hHHHHHHHHHHHhcCCc
Q psy1960 358 FCFCSCFLLLFLFSASV 374 (428)
Q Consensus 358 ~d~f~~~L~~~l~~l~v 374 (428)
+|+|+++|+++++++++
T Consensus 296 ~d~f~~~l~~~~~~~~v 312 (486)
T 1t90_A 296 ADEFMAKLQEKVADIKI 312 (486)
T ss_dssp HHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999998764
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-57 Score=472.56 Aligned_cols=283 Identities=20% Similarity=0.236 Sum_probs=257.8
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
.++++|||+|+.+.+... ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|.
T Consensus 4 ~~~~~i~g~~~~~~~~~~----------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 65 (475)
T 1euh_A 4 QYKNYVNGEWKLSENEIK----------IYEPAS-GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA------- 65 (475)
T ss_dssp BCCEEETTEEECCSSEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------
T ss_pred ccceeECCEEecCCCceE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------
Confidence 468999999998766333 789998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc-------------cc----ccc-eeee
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV-------------LA----SNL-GRGE 195 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~-------------~~----~~~-~~~~ 195 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. .+ ... +..+
T Consensus 66 ~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (475)
T 1euh_A 66 AYLHKV-ADI--LMRDKE-KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRR 141 (475)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEE
T ss_pred HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEE
Confidence 999999 999 999988 7777888999999876653 345555431 11 123 6777
Q ss_pred cccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCC
Q psy1960 196 GLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASP 274 (428)
Q Consensus 196 ~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~ 274 (428)
.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.+++++|+.||
T Consensus 142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~ 221 (475)
T 1euh_A 142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ 221 (475)
T ss_dssp EECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT
T ss_pred eccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC
Confidence 8899999999999999999999999998 999999999999999999999999999999999999998788999999999
Q ss_pred CeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEe
Q psy1960 275 YLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVP 354 (428)
Q Consensus 275 ~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~ 354 (428)
++++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||
T Consensus 222 ~v~~V~fTGS~~~g~~i~~~aa--~~------~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~ 293 (475)
T 1euh_A 222 AVNFINFTGSTGIGERIGKMAG--MR------PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVM 293 (475)
T ss_dssp TCCEEEEESCHHHHHHHHHHTT--TS------CEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEE
T ss_pred CcCEEEEECchHHHHHHHHhcC--CC------cEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEe
Confidence 9999999999999999999887 66 899999999999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHHHHHhcCCc
Q psy1960 355 ESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 355 ~si~d~f~~~L~~~l~~l~v 374 (428)
++++|+|+++|+++++++++
T Consensus 294 ~~i~d~f~~~l~~~~~~~~~ 313 (475)
T 1euh_A 294 ESVADELVEKIREKVLALTI 313 (475)
T ss_dssp HHHHHHHHHHHHHHHHTSCB
T ss_pred hhHHHHHHHHHHHHHHhccC
Confidence 99999999999999998764
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-57 Score=475.70 Aligned_cols=287 Identities=19% Similarity=0.216 Sum_probs=260.4
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
..+++|||+|+.+.+...++ ++||++ ++++++++.++.++ ++|+++|+ |++.|+.++.++|.
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~--------~~~P~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~------- 70 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIE--------VINPAT-EEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQ------- 70 (478)
T ss_dssp CCEEEETTEEEECSSSCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHH-------
T ss_pred hhhheECCEEecCCCCCeEE--------eECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------
Confidence 46799999999876544333 789999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcc-cc------hhhhhhhcc--------ccccceeeecccceEEEE
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGG-RM------SALTFYLEV--------LASNLGRGEGLDGFVAAV 204 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~-~~------~~l~~~~~~--------~~~~~~~~~~p~GVV~~I 204 (428)
++|+++ +++ |+++.+ ....+...+.|||..++ .. +.+++++.. .....+.++.|+|||++|
T Consensus 71 ~~L~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~P~GVv~~I 146 (478)
T 3ty7_A 71 ALLDKI-VKE--YENRKD-DIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGDDLVVKEAIGVSGLI 146 (478)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEEETTEEEEEEECCCEEEE
T ss_pred HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccCCccceEEecCceEEEEE
Confidence 999999 999 999988 77778889999998877 32 245555532 123456778899999999
Q ss_pred CCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeC
Q psy1960 205 SPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTG 283 (428)
Q Consensus 205 ~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTG 283 (428)
+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++.++++.|+.||+|++|+|||
T Consensus 147 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTG 226 (478)
T 3ty7_A 147 TPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTG 226 (478)
T ss_dssp CCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECS
T ss_pred CCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999 999999999999999999999999999999999999998889999999999999999999
Q ss_pred ChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHH
Q psy1960 284 SVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSC 363 (428)
Q Consensus 284 S~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~ 363 (428)
|+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|++
T Consensus 227 S~~~G~~i~~~aa~~~~------~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~ 300 (478)
T 3ty7_A 227 SGPTGSKIMEKAAKDFK------KVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLA 300 (478)
T ss_dssp CHHHHCC--CSTTTTTC------EEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHH
T ss_pred cHHHHHHHHHHHHhcCC------ceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHH
Confidence 99999999999998888 899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCc
Q psy1960 364 FLLLFLFSASV 374 (428)
Q Consensus 364 ~L~~~l~~l~v 374 (428)
+|+++++++++
T Consensus 301 ~l~~~~~~~~~ 311 (478)
T 3ty7_A 301 ELKEQFSQVRV 311 (478)
T ss_dssp HHHHHHHTCCB
T ss_pred HHHHHHHhccC
Confidence 99999998753
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-57 Score=475.00 Aligned_cols=279 Identities=22% Similarity=0.240 Sum_probs=249.8
Q ss_pred eEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHH
Q psy1960 65 IVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLY 142 (428)
Q Consensus 65 ~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL 142 (428)
++|||+|+.++. .. ++||++ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|
T Consensus 2 ~~I~G~~~~~~~-~~----------~~nP~t-g~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L 62 (486)
T 3pqa_A 2 MFIDGKWINRED-MD----------VINPYS-LEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRY-------NIL 62 (486)
T ss_dssp -------CCCCC-EE----------EECTTT-CCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHH-------HHH
T ss_pred eeECCEEecCCC-eE----------EECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHH
Confidence 589999998754 43 899999 89999999999999 99999999 99999999999999 999
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----------ccccceeeecccceEEEEC
Q psy1960 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-----------LASNLGRGEGLDGFVAAVS 205 (428)
Q Consensus 143 ~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-----------~~~~~~~~~~p~GVV~~I~ 205 (428)
+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. .+...+..+.|+|||++|+
T Consensus 63 ~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~ 138 (486)
T 3pqa_A 63 MNI-AKQ--IKEKKE-ELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSDDRLIFTRREPVGIVGAIT 138 (486)
T ss_dssp HHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCTTEEEEEEEEECSEEEEEE
T ss_pred HHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEEEEccccEEEEEC
Confidence 999 999 999988 77778899999998876543 45665531 1223567788899999999
Q ss_pred CCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 206 PFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 206 P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++ |+|+|++|+++|++.++++.|+.||+|++|+
T Consensus 139 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~ 218 (486)
T 3pqa_A 139 PFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMIS 218 (486)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEE
T ss_pred CCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEE
Confidence 999999999999999998 99999999999999999999999999 9999999999998888999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+
T Consensus 219 fTGS~~~g~~i~~~aa--~~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~ 290 (486)
T 3pqa_A 219 FTGSSKVGELITKKAG--FK------KIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADK 290 (486)
T ss_dssp EESCHHHHHHHHHHCC--SS------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHH
T ss_pred EECChHHHHHHHHHcC--CC------ceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHH
Confidence 9999999999998877 55 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 291 f~~~l~~~~~~~~~ 304 (486)
T 3pqa_A 291 FIEMFVNKAKVLNV 304 (486)
T ss_dssp HHHHHHHHHHTCCB
T ss_pred HHHHHHHHHHhccc
Confidence 99999999998653
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-56 Score=472.14 Aligned_cols=283 Identities=19% Similarity=0.197 Sum_probs=256.8
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-ccccCChhhhhhhhhh
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-PYEKNSVGLLINTEVL 137 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-~W~~~~~~~R~~~~~~ 137 (428)
..++++|||+|+.+..... ++||++ ++++++++.++.++ ++|+++|+ ||+ .|+.+|.++|.
T Consensus 17 ~~~~~~i~g~~~~~~~~~~----------v~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~----- 80 (501)
T 1uxt_A 17 PVYPSYLAGEWGGSGQEIE----------VKSPID-LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL----- 80 (501)
T ss_dssp EEECEECSSSEECCSCEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHH-----
T ss_pred cccceeECCEEecCCCeEE----------EECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHH-----
Confidence 4678999999998753233 789999 89999999999999 99999999 999 99999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc--------------c---cccceee
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV--------------L---ASNLGRG 194 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~--------------~---~~~~~~~ 194 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++. +.++|++.. . ....+.+
T Consensus 81 --~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~ 154 (501)
T 1uxt_A 81 --AVLRKA-ADI--IERNLD-VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVR 154 (501)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEE
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEE
Confidence 999999 999 999988 7777888999999876654 245555431 1 1134567
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +++++|+.|
T Consensus 155 ~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~ 233 (501)
T 1uxt_A 155 REPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVAD 233 (501)
T ss_dssp EEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTC
T ss_pred EeeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhC
Confidence 78899999999999999999999999998 9999999999999999999999999999999999999987 899999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|+|++|+||||+++|+.|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+||
T Consensus 234 ~~vd~I~FTGS~~~G~~i~~~aa--l~------~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV 305 (501)
T 1uxt_A 234 DRVAAVSFTGSTEVGERVVKVGG--VK------QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLA 305 (501)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHC--SS------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEE
T ss_pred CCcCEEEEeCcHHHHHHHHHhcC--CC------eEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEe
Confidence 99999999999999999999887 66 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++|+|+++|+++++++++
T Consensus 306 ~~~i~d~f~~~l~~~~~~~~~ 326 (501)
T 1uxt_A 306 ERPVYGKLVEEVAKRLSSLRV 326 (501)
T ss_dssp EHHHHHHHHHHHHHHHHTCCB
T ss_pred ccchHHHHHHHHHHHHHhccC
Confidence 999999999999999998764
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-56 Score=466.30 Aligned_cols=283 Identities=23% Similarity=0.244 Sum_probs=256.0
Q ss_pred CeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHH
Q psy1960 64 PIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDL 141 (428)
Q Consensus 64 p~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~i 141 (428)
+++|||+|+.+.+... + ++||.+ ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++
T Consensus 7 ~~~I~G~~~~~~~~~~-~--------~~~P~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~ 69 (490)
T 3ju8_A 7 THYIAGQWLAGQGETL-E--------SLDPVG-QGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRI-------EL 69 (490)
T ss_dssp CEEETTEEECCCSCEE-E--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HH
T ss_pred CceECCEEecCCCCeE-E--------EECCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HH
Confidence 7999999998754322 2 679998 89999999999999 99999999 99999999999999 99
Q ss_pred HHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEE
Q psy1960 142 YFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAA 203 (428)
Q Consensus 142 L~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~ 203 (428)
|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. ........+.|+|||++
T Consensus 70 L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~ 145 (490)
T 3ju8_A 70 LERF-AAT--LKSRAD-ELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAV 145 (490)
T ss_dssp HHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEE
T ss_pred HHHH-HHH--HHHHHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEE
Confidence 9999 999 999988 77778889999998776542 44554321 11223455788999999
Q ss_pred ECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEee
Q psy1960 204 VSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFT 282 (428)
Q Consensus 204 I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fT 282 (428)
|+|||||+....+++++||+ ||+||+|||+.+|+++..+++++.++|+|+|++|+++| +.+++++|+.||+|++|+||
T Consensus 146 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fT 224 (490)
T 3ju8_A 146 FGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFT 224 (490)
T ss_dssp ECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEE
T ss_pred ECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEE
Confidence 99999999999999999998 99999999999999999999999999999999999999 57889999999999999999
Q ss_pred CChhhHHHHHHHHhcccCcccCCCcE-EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCc-hHH
Q psy1960 283 GSVPTFNRLWLQVGKNINVYKNFPRL-IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESL-FCF 360 (428)
Q Consensus 283 GS~~~g~~i~~~~a~~~~~~~~~~~~-~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si-~d~ 360 (428)
||+++|+.|+++++++++ |+ ++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++ +|+
T Consensus 225 GS~~~g~~i~~~aa~~~~------~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~ 298 (490)
T 3ju8_A 225 GSSRTGNLLHSQFGGQPQ------KILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDA 298 (490)
T ss_dssp SCHHHHHHHHHHTTTCTT------SEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHH
T ss_pred CcHHHHHHHHHHhhccCC------CcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHH
Confidence 999999999999999888 77 7999999999999999999999999999999999999999999999997 999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|+++|+++++++++
T Consensus 299 f~~~l~~~~~~~~~ 312 (490)
T 3ju8_A 299 LLARLVAVSATLRV 312 (490)
T ss_dssp HHHHHHHHHHHCCB
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998754
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-56 Score=463.75 Aligned_cols=265 Identities=17% Similarity=0.181 Sum_probs=246.6
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||+| ++++++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 8 ~~nP~t-g~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 75 (484)
T 3ros_A 8 SVNPYT-NEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRA-------EILHDI-ANA--LKEHED-ELAKMMTLE 75 (484)
T ss_dssp EEETTT-TEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred eeCCCC-CCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccc------hhhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRM------SALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~------~~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
.|||..+++. +.++|++.. .....+..+.|+|||++|+|||||+....++++|||+ ||+||
T Consensus 76 ~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VV 155 (484)
T 3ros_A 76 MGKLLSESKEEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPIL 155 (484)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEE
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEE
Confidence 9999887654 245555431 1234567788999999999999999999999999999 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++ |+.||+|++|+||||+++|+.|+++++++++ |+
T Consensus 156 lKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk------~v 228 (484)
T 3ros_A 156 LKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLK------KS 228 (484)
T ss_dssp EECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTC------EE
T ss_pred EECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCC------ce
Confidence 9999999999999999999999999999999998888888 9999999999999999999999999999888 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 229 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 293 (484)
T 3ros_A 229 TMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLK 293 (484)
T ss_dssp EEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCC
T ss_pred EeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999865
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-55 Score=464.77 Aligned_cols=289 Identities=17% Similarity=0.103 Sum_probs=256.3
Q ss_pred HHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEE-EEeCCCHhH-HHHHHHHh-ccCccccCChhh
Q psy1960 54 KRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIA-KFYYATPVL-KSALDIVS-SLCPYEKNSVGL 130 (428)
Q Consensus 54 ~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia-~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~ 130 (428)
+.+.+.....++||||+|+.+.+ ++||+| +++++ +++.++.++ ++|+++|+ ||+.|+.++.++
T Consensus 21 ~~~~~~~~~~~~~I~G~~~~~~~-------------v~nP~t-g~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~ 86 (528)
T 3v4c_A 21 QSMMIFTPKGKHLVAGEWLDGAG-------------TFASAP-AHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKE 86 (528)
T ss_dssp --CCSCCCCCCEEETTEEECCSS-------------EEECCC-SSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHH
T ss_pred HHhhhcccccCceECCEEecCCC-------------ccCCCC-CCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHH
Confidence 33444456678999999998754 379998 89998 999999999 99999999 999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhhhhcc------------------
Q psy1960 131 LINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTFYLEV------------------ 186 (428)
Q Consensus 131 R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~~~~~------------------ 186 (428)
|. ++|+++ +++ |+++.+ ....+...+.|||+.+++. +.++|++..
T Consensus 87 R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~ 155 (528)
T 3v4c_A 87 RA-------AFLRAI-ADE--IEARAE-AITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPER 155 (528)
T ss_dssp HH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTC
T ss_pred HH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccc
Confidence 99 999999 999 999988 7777888999999876554 244554321
Q ss_pred ---ccccceeeecccceEEEECCCchhhhhhH--hhhhhhcC-CCEEEEeCCccchHHHHHHHHHH----HHcCCCCccE
Q psy1960 187 ---LASNLGRGEGLDGFVAAVSPFNFTAIGGN--LAYTPALM-GSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVV 256 (428)
Q Consensus 187 ---~~~~~~~~~~p~GVV~~I~P~NfP~~~~~--~~iapALa-GN~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv 256 (428)
.....+..+.|+|||++|+|||||+...+ ++++|||+ ||+||+|||+.+|+++..+++++ .++|+|+|++
T Consensus 156 ~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv 235 (528)
T 3v4c_A 156 QPAPRQEIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVF 235 (528)
T ss_dssp SSSCBCCEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGE
T ss_pred cCCCCCcceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeE
Confidence 11224567888999999999999988754 89999999 99999999999999999999875 4689999999
Q ss_pred EEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhccc--CcccCCCcEEEecCCCceeEEcCCC---CHHHHHH
Q psy1960 257 NFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNI--NVYKNFPRLIGECGGKNFHFIHASA---NVESVVN 331 (428)
Q Consensus 257 ~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~--~~~~~~~~~~lElGGkn~~iV~~dA---Dld~Aa~ 331 (428)
|+|+|++.+++++|+.||+|++|+||||+++|+.|++++++++ + |+++|+|||||+||++|| |+|.|++
T Consensus 236 ~vv~g~~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~------pv~lElGGk~p~iV~~dAd~~dl~~Aa~ 309 (528)
T 3v4c_A 236 SLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPI------PFFGELGSVNPMFLLPEALKARAETLGQ 309 (528)
T ss_dssp EEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCC------CEEEECCCCCCEEECHHHHHHHHHHHHH
T ss_pred EEEeCCCHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCC------ceEEecCCCCeEEECCCCChhhHHHHHH
Confidence 9999988899999999999999999999999999999999988 5 899999999999999999 8999999
Q ss_pred HHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHHHHhcCC
Q psy1960 332 GTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 332 ~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~~l~~l~ 373 (428)
.+++++|.|+||.|++++|+|||++ ++|+|+++|++++++++
T Consensus 310 ~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 352 (528)
T 3v4c_A 310 GWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVA 352 (528)
T ss_dssp HHHHHHHGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCccccCcEEEEecccHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999998 99999999999998875
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-54 Score=447.12 Aligned_cols=265 Identities=20% Similarity=0.229 Sum_probs=245.0
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ |++.|+.++.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 11 ~~~P~t-~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 78 (462)
T 3etf_A 11 SVNPAT-GQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRA-------QTLRDI-GQA--LRAHAE-EMAQCITRE 78 (462)
T ss_dssp EECTTT-CCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred eECCCC-CCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCcccch------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEE
Q psy1960 168 GQQPFGGGRMS------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVL 228 (428)
Q Consensus 168 ~gkp~~~~~~~------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VV 228 (428)
.|||..+++.+ .++|++.. .+...+.++.|+|||++|+|||||+....+++++||+ ||+||
T Consensus 79 ~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~Vv 158 (462)
T 3etf_A 79 MGKPIKQARAEVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYL 158 (462)
T ss_dssp HCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEE
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEE
Confidence 99998776542 45555431 1223566788899999999999999999999999998 99999
Q ss_pred EeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 229 WKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 229 lKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
+|||+.+|+++..+++++.++|+|+|++|+++|+ .+.++.|+.||++++|+||||+++|+.|++.++++++ |+
T Consensus 159 lKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~-~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~------~v 231 (462)
T 3etf_A 159 LKHAPNVTGCAQMIARILAEAGTPAGVYGWVNAN-NEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALK------KC 231 (462)
T ss_dssp EECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCC-HHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTC------CE
T ss_pred EECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECC-HHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCC------ce
Confidence 9999999999999999999999999999999995 5678999999999999999999999999999999888 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 232 ~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 296 (462)
T 3etf_A 232 VLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALK 296 (462)
T ss_dssp EEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCC
T ss_pred EEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999865
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-54 Score=456.42 Aligned_cols=282 Identities=17% Similarity=0.171 Sum_probs=246.7
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-c-cCccccCChhhhhhhhhhH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-S-LCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A-~~~W~~~~~~~R~~~~~~~ 138 (428)
.++++|||+|+.+.+. .++ ++||++ ++++++++.++ ++ ++|+++|+ | |+.|+.++.++|.
T Consensus 7 ~~~~~i~G~~~~~~~~-~~~--------v~nP~t-g~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~------ 69 (534)
T 2y53_A 7 LLKNHVAGQWIAGTGA-GIT--------LTDPVT-GVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRA------ 69 (534)
T ss_dssp ECCEEETTEEECCSSS-CEE--------EECTTT-CCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred hhhhEECCEEecCCCC-eEE--------EECCCC-CCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHH------
Confidence 4789999999976443 222 789999 89999999987 78 99999999 9 5999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------cc-------c--cc
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------LA-------S--NL 191 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------~~-------~--~~ 191 (428)
++|+++ +++ |+++.+ ....+...+.|||..+++.+ .++|++.. ++ . ..
T Consensus 70 -~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 144 (534)
T 2y53_A 70 -ARLADI-VKL--LQAKRG-DYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSA 144 (534)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEE
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccc
Confidence 999999 999 999988 77778889999998766542 35555431 00 0 12
Q ss_pred eeeeccc-ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcC-CCCccEEEeeCCChhhhh
Q psy1960 192 GRGEGLD-GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAG-VPPGVVNFVPADGPVFGD 268 (428)
Q Consensus 192 ~~~~~p~-GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAG-lP~gvv~vv~g~g~~~g~ 268 (428)
...+.|. |||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++.++++
T Consensus 145 ~~~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~ 224 (534)
T 2y53_A 145 QHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLD 224 (534)
T ss_dssp EEEEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGG
T ss_pred eEEEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHh
Confidence 4556675 9999999999999999999999998 999999999999999999999999999 799999999997655444
Q ss_pred hhhcCCCeeEEEeeCChhhHHHHHHHHh--cccCcccCCCcEEEecCCCceeEEcCCC-----CHHHHHHHHHHHHhhcC
Q psy1960 269 TITASPYLAGINFTGSVPTFNRLWLQVG--KNINVYKNFPRLIGECGGKNFHFIHASA-----NVESVVNGTIRSAFEYC 341 (428)
Q Consensus 269 ~L~~~~~v~~I~fTGS~~~g~~i~~~~a--~~~~~~~~~~~~~lElGGkn~~iV~~dA-----Dld~Aa~~iv~saf~~~ 341 (428)
.| +++++|+||||+++|+.|++.++ ++++ |+++|+|||||+||++|| |+|.|++.+++++|.|+
T Consensus 225 ~l---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k------~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~ 295 (534)
T 2y53_A 225 QI---RSFDVVSFTGSADTAATLRAHPAFVQRGA------RLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKS 295 (534)
T ss_dssp GC---CTTCEEEEESCHHHHHHHHTSHHHHTTCC------EEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGG
T ss_pred cc---cccCEEEEECCHHHHHHHHHhhhhhcCCC------cEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCC
Confidence 43 57899999999999999998775 7777 899999999999999999 99999999999999999
Q ss_pred CCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 342 GQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 342 GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
||.|++++|+|||++++|+|+++|+++++++++
T Consensus 296 GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 328 (534)
T 2y53_A 296 GQKCTAIRRAFVPEAALEPVLEALKAKLAKITV 328 (534)
T ss_dssp GCCTTSEEEEEEEGGGHHHHHHHHHHHHTTCCB
T ss_pred CCcccCCCEEEEeccHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999764
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-54 Score=451.66 Aligned_cols=266 Identities=16% Similarity=0.130 Sum_probs=240.7
Q ss_pred cccCCCCCeeE-EEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 90 QPMPHNHKKKI-AKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 90 ~~~P~~~g~~i-a~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
++||++ ++++ ++++.++.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...
T Consensus 11 ~~nP~t-g~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~ 78 (510)
T 1ez0_A 11 ATNAFT-GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRA-------SLLRTI-ASE--LEARSD-DIIARAHL 78 (510)
T ss_dssp EECTTT-SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHH
T ss_pred eECCCC-CCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHH
Confidence 789998 8999 7999999999 99999999 99999999999999 999999 999 999988 77778889
Q ss_pred hcCCCCCcccch------hhhhhhcc-------------------c-c-ccceeeecccceEEEECCCchhhhhh--Hhh
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV-------------------L-A-SNLGRGEGLDGFVAAVSPFNFTAIGG--NLA 217 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~-------------------~-~-~~~~~~~~p~GVV~~I~P~NfP~~~~--~~~ 217 (428)
+.|||..+++.| .++|++.. . . ...+.++.|+|||++|+|||||+... .++
T Consensus 79 e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 158 (510)
T 1ez0_A 79 ETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGD 158 (510)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHH
Confidence 999998655432 34444320 0 1 12356778899999999999998874 499
Q ss_pred hhhhcC-CCEEEEeCCccchHHHHHHHHHH----HHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHH
Q psy1960 218 YTPALM-GSSVLWKPSDTALLSNYTIYKIM----IEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLW 292 (428)
Q Consensus 218 iapALa-GN~VVlKPs~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~ 292 (428)
+++||+ ||+||+|||+.+|+++..+++++ .++|+|+|++|+++|++.+++++|+.||+|++|+||||+++|+.|+
T Consensus 159 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~ 238 (510)
T 1ez0_A 159 TASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALF 238 (510)
T ss_dssp HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHH
Confidence 999998 99999999999999999999998 5679999999999998888999999999999999999999999999
Q ss_pred HHHhccc--CcccCCCcEEEecCCCceeEEcCCCCHH--HHHHHHHHHHhhcCCCccccCceEEEeCC-chHHHHHHHHH
Q psy1960 293 LQVGKNI--NVYKNFPRLIGECGGKNFHFIHASANVE--SVVNGTIRSAFEYCGQKCSACSRMYVPES-LFCFCSCFLLL 367 (428)
Q Consensus 293 ~~~a~~~--~~~~~~~~~~lElGGkn~~iV~~dADld--~Aa~~iv~saf~~~GQ~C~a~srv~V~~s-i~d~f~~~L~~ 367 (428)
+++++++ + |+++|+|||||+||++|||+| .|++.+++++|.|+||.|++++|+|||++ ++|+|+++|++
T Consensus 239 ~~aa~~l~~~------pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~ 312 (510)
T 1ez0_A 239 NLAHERPEPI------PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQS 312 (510)
T ss_dssp HHHHHSSSCC------CEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHH
T ss_pred HHhhccCCCc------cEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHH
Confidence 9999886 6 899999999999999999999 99999999999999999999999999999 99999999999
Q ss_pred HHhcCC
Q psy1960 368 FLFSAS 373 (428)
Q Consensus 368 ~l~~l~ 373 (428)
++++++
T Consensus 313 ~~~~~~ 318 (510)
T 1ez0_A 313 LIRQQS 318 (510)
T ss_dssp HHHHCC
T ss_pred HHHhcC
Confidence 998875
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-53 Score=439.72 Aligned_cols=263 Identities=20% Similarity=0.152 Sum_probs=230.1
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
..||++ ++++++++.++.++ ++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 10 ~~~~~~-~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 77 (457)
T 3lns_A 10 HSSGHI-DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRK-------QSLERL-KEA--VINNKE-ALYSALAED 77 (457)
T ss_dssp --------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHH-------HHHHHH-HHH--HHTTHH-HHHHHHHHH
T ss_pred ccCCCC-CCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 678998 89999999999999 99999999 99999999999999 999999 999 999988 777888999
Q ss_pred cCCCCCcccc-------hhhhhhhcc----------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-
Q psy1960 168 GQQPFGGGRM-------SALTFYLEV----------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM- 223 (428)
Q Consensus 168 ~gkp~~~~~~-------~~l~~~~~~----------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa- 223 (428)
.|||..+++. +.+++++.. .....+..+.|+|||++|+|||||+....+++++||+
T Consensus 78 ~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaa 157 (457)
T 3lns_A 78 LGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIG 157 (457)
T ss_dssp HCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHT
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHc
Confidence 9999887653 234444320 1233467788899999999999999999999999998
Q ss_pred CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCccc
Q psy1960 224 GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYK 303 (428)
Q Consensus 224 GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~ 303 (428)
||+||+|||+.+|+++..+++++.++ +|+|++|+++| +.+++++|+. ++|++|+||||+++|+.|+++++++++
T Consensus 158 GN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~--- 231 (457)
T 3lns_A 158 GNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLT--- 231 (457)
T ss_dssp TCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTC---
T ss_pred CCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccC---
Confidence 99999999999999999999999999 99999999999 6678999998 689999999999999999999999888
Q ss_pred CCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 304 NFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 304 ~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 232 ---pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 298 (457)
T 3lns_A 232 ---PVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL 298 (457)
T ss_dssp ---CEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC
T ss_pred ---ceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999999999999999999999999998864
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-53 Score=443.03 Aligned_cols=263 Identities=19% Similarity=0.135 Sum_probs=236.9
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||+| |+++++++.+++++ ++|+++|+ ||+.|+++|.++|. ++|+++ +++ |+++.+ ....+...+
T Consensus 10 v~nP~t-g~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 77 (474)
T 4h7n_A 10 VRNPRT-GKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRI-------TTLQQW-KQA--ILSRRE-QLTEALVND 77 (474)
T ss_dssp EECTTT-CSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHH-------HHHHHH-HHH--HHTTHH-HHHHHHHHH
T ss_pred eECCCC-CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHH
Confidence 789999 89999999999999 99999999 99999999999999 999999 999 999988 777788899
Q ss_pred cCCCCCccc-----chhhhhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEE
Q psy1960 168 GQQPFGGGR-----MSALTFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSV 227 (428)
Q Consensus 168 ~gkp~~~~~-----~~~l~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~V 227 (428)
+||+..... .+.++++... +.......+.|+|||++|+|||||+....++++|||+ ||+|
T Consensus 78 ~Gk~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~V 157 (474)
T 4h7n_A 78 TGRLSITVLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAV 157 (474)
T ss_dssp HSCSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEE
T ss_pred cCCcHHHHHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCce
Confidence 999743211 1234444320 1122334567899999999999999999999999999 9999
Q ss_pred EEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 228 LWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 228 VlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+|||+.+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| +++|+||||+++|+.|++.++++++ |
T Consensus 158 VlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~------~ 228 (474)
T 4h7n_A 158 VVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAARRFI------P 228 (474)
T ss_dssp EEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTC------C
T ss_pred eecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccc------c
Confidence 9999999999999999999999999999999999 55778889876 8999999999999999999999988 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|++++++++
T Consensus 229 v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~ 294 (474)
T 4h7n_A 229 AYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQ 294 (474)
T ss_dssp EEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCC
T ss_pred ccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999865
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=451.83 Aligned_cols=287 Identities=22% Similarity=0.245 Sum_probs=254.4
Q ss_pred cCCCCCCCCCCCcHHHHHHHHHHHHhccCCcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH
Q psy1960 31 VQETPEWTYLPGSKEREAITAALKRVGSTVEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL 110 (428)
Q Consensus 31 ~~n~p~~~~~~~s~~r~~~~~al~~~~~~~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~ 110 (428)
..|++.+||. ...+++++.++++.+... | . | ++.++.++
T Consensus 513 r~n~~~~d~~-~~~~~~~~~~~~~~~~~~-----------~-------~-------------p---------v~~a~~~d 551 (1001)
T 3haz_A 513 RRNSRGVEFG-ARTALDQLLTDVKAETGD-----------L-------K-------------P---------IADATPDQ 551 (1001)
T ss_dssp CCCCCCCCTT-SHHHHHHHHHHHHHCCCC-----------C-------C-------------C---------CCCCCHHH
T ss_pred cCCCCCCCCC-CHHHHHHHHHHHHHHhhc-----------C-------C-------------C---------cccCCHHH
Confidence 4699999997 467788898888887431 1 1 2 56778999
Q ss_pred -HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc------hhhhh
Q psy1960 111 -KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM------SALTF 182 (428)
Q Consensus 111 -~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~------~~l~~ 182 (428)
++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+.|||+.++.. +.++|
T Consensus 552 v~~Av~aA~~A~~~W~~~~~~eR~-------~iL~~~-ad~--l~~~~~-eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~ 620 (1001)
T 3haz_A 552 AHAAVAAARAGFAGWSRTPAGIRA-------AALEQA-AHL--LESRSA-HFIALLQREGGKTLDDALSELREAADFCRY 620 (1001)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHTTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Confidence 99999999 99999999999999 999999 999 999988 7777888999999877654 35666
Q ss_pred hhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHH
Q psy1960 183 YLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMI 247 (428)
Q Consensus 183 ~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~ 247 (428)
|+.. .+......+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 6541 1122345677899999999999999999999999998 999999999999999999999999
Q ss_pred HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHH
Q psy1960 248 EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVE 327 (428)
Q Consensus 248 eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld 327 (428)
++|+|+|++|+|+|++.+ ++.|+.||+|++|+||||+++|+.|.+.++++.. +.+|+++|+|||||+||++|||+|
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~---~l~pv~lElGGknp~IV~~dADld 776 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDG---PIVPLIAETGGINAMIADATALPE 776 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS---CCCCEEEECCCCEEEEECTTSCHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccC---CCceEEeecCCcceEEEcCCCCHH
Confidence 999999999999998887 9999999999999999999999999999887511 123899999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCC
Q psy1960 328 SVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 328 ~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~ 373 (428)
+|++.+++|+|.|+||.|+|++|+|||++++|+|+++|++++++++
T Consensus 777 ~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~ 822 (1001)
T 3haz_A 777 QVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELK 822 (1001)
T ss_dssp HHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999865
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-50 Score=417.64 Aligned_cols=248 Identities=13% Similarity=0.077 Sum_probs=219.5
Q ss_pred CCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-----
Q psy1960 105 YATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM----- 177 (428)
Q Consensus 105 ~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~----- 177 (428)
..+.++ ++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||..+++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~ea~~~ev~~ 82 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRI-------QQLEAL-QRL--IQEQEQ-ELVGALAADLHKNEWNAYYEEVVY 82 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHHHH
Confidence 345668 99999999 99999999999999 999999 999 999988 7777888999999876642
Q ss_pred --hhhhhhh--------cc--------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHH
Q psy1960 178 --SALTFYL--------EV--------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLS 238 (428)
Q Consensus 178 --~~l~~~~--------~~--------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~ 238 (428)
+.++++. +. .....+..+.|+|||++|+|||||+....++++|||+ ||+||+|||+.+|++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t 162 (469)
T 3sza_A 83 VLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENM 162 (469)
T ss_dssp HHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHH
T ss_pred HHHHHHHHHHHHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 1222221 11 0123466788999999999999999999999999998 999999999999999
Q ss_pred HHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 239 NYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 239 a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+..+++++.++ +|+|++|+++|++. .+..|+.| ++++|+||||+++|+.|+++++++++ |+++|+|||||+
T Consensus 163 ~~~l~~l~~~a-lP~gvv~vv~g~~~-~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lk------pv~lELGGk~p~ 233 (469)
T 3sza_A 163 ASLLATIIPQY-LDKDLYPVINGGVP-ETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLT------PVTLELGGKSPC 233 (469)
T ss_dssp HHHHHHHHHHH-SCTTTSCBCCCSHH-HHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTC------CEEEECCCCCEE
T ss_pred HHHHHHHHHHh-CCcceEEEEECCHH-HHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccC------ceEEecCCCCce
Confidence 99999999998 99999999999554 46677778 89999999999999999999999888 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcC
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSA 372 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l 372 (428)
||++|||+|.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++
T Consensus 234 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 287 (469)
T 3sza_A 234 YVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF 287 (469)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999873
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-49 Score=409.09 Aligned_cols=263 Identities=13% Similarity=0.037 Sum_probs=204.8
Q ss_pred cccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHh
Q psy1960 90 QPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVV 167 (428)
Q Consensus 90 ~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~ 167 (428)
++||.+ ++++++++.++.++ ++|+++|+ ||+.|+.++..+|. ++|+++ +++ |+++.+ ....+...+
T Consensus 11 ~~~P~t-g~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e 78 (463)
T 2h5g_A 11 VDLGTE-NLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRA-------EIIHHL-ADL--LTDQRD-EILLANKKD 78 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHH
T ss_pred CcCCCC-CCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHH
Confidence 689998 89999999999999 99999999 99999999999999 999999 999 999887 665666666
Q ss_pred c-------CCCCC----cccc------hhhhhhhcc---------------ccccceeeecccceEEEECCCchhhhhhH
Q psy1960 168 G-------QQPFG----GGRM------SALTFYLEV---------------LASNLGRGEGLDGFVAAVSPFNFTAIGGN 215 (428)
Q Consensus 168 ~-------gkp~~----~~~~------~~l~~~~~~---------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~ 215 (428)
. |||+. ++.. +.++|++.. .+...+..+.|+|||++|+||| |....
T Consensus 79 ~g~~~~~~Gk~~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p- 156 (463)
T 2h5g_A 79 LEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP- 156 (463)
T ss_dssp HHHHTTTSCHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-
T ss_pred hhcccccCCCchhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-
Confidence 6 68875 2222 345666521 1112356778899999999776 65554
Q ss_pred hhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHH
Q psy1960 216 LAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNR 290 (428)
Q Consensus 216 ~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~ 290 (428)
++++|||+ ||+||+|||+.+|+++..++++++++ | |+|++|+|+| +.++++.|+.||+|++|+||||+++|+.
T Consensus 157 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 234 (463)
T 2h5g_A 157 QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRD 234 (463)
T ss_dssp HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHH
Confidence 78999998 99999999999999999999999999 9 9999999999 6778999999999999999999999999
Q ss_pred HHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchH-HHHHHHHHHH
Q psy1960 291 LWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFC-FCSCFLLLFL 369 (428)
Q Consensus 291 i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d-~f~~~L~~~l 369 (428)
|+++++ ++ |+++|+|||||+||++|||+|.|++.+++++|.| ||.|++++|+|||++++| .+.+++.+.+
T Consensus 235 i~~~aa--l~------pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d~p~~~~~i~~~ 305 (463)
T 2h5g_A 235 IQKAAK--GI------PVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLRTPLFDQIIDML 305 (463)
T ss_dssp HHHHCS--SS------CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTTSHHHHHHHHHH
T ss_pred HHHhcC--CC------CEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccchHHHHHHHHHH
Confidence 999887 56 8999999999999999999999999999999999 999999999999999998 5777887777
Q ss_pred hcCCcceE
Q psy1960 370 FSASVPVF 377 (428)
Q Consensus 370 ~~l~v~~~ 377 (428)
.+-+..++
T Consensus 306 ~~~Ga~v~ 313 (463)
T 2h5g_A 306 RVEQVKIH 313 (463)
T ss_dssp HHTTCEEE
T ss_pred HhCCCEEE
Confidence 66555544
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=399.28 Aligned_cols=245 Identities=11% Similarity=0.073 Sum_probs=214.5
Q ss_pred EeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc---
Q psy1960 103 FYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM--- 177 (428)
Q Consensus 103 v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~--- 177 (428)
++.++.++ ++++++|+ ||+.|+.++.++|. ++|+++ +++ ++++.+ ....+...++|++..+++.
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~il~~~-a~~--l~~~~~-~la~~~~~e~Gk~~~e~~~~~~ 69 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVD-------KIFRAA-SLA--ANQARI-PLAQQAVEESGMGIVEDKVIKN 69 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCSCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHHHHHH
Confidence 35678899 99999999 99999999999999 999999 999 999888 7777888999999887654
Q ss_pred ----hhh-hhhhcc---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHH
Q psy1960 178 ----SAL-TFYLEV---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242 (428)
Q Consensus 178 ----~~l-~~~~~~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l 242 (428)
+.+ +++... .....+..+.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+
T Consensus 70 ~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~ 149 (452)
T 3my7_A 70 HFASEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDA 149 (452)
T ss_dssp HHHHHHHHHHHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHH
Confidence 122 344321 1223467788899999999999999999999999998 9999999999999999998
Q ss_pred HHHHH----HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCcee
Q psy1960 243 YKIMI----EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFH 318 (428)
Q Consensus 243 ~~ll~----eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~ 318 (428)
+++++ ++|+|+|++|+++|++.++++.|+.||+|++|+||||+++++ +++++++ |+++|+|||||+
T Consensus 150 ~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~k------p~~~e~gG~~p~ 219 (452)
T 3my7_A 150 AKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYSSGK------PAIGVGAGNVPV 219 (452)
T ss_dssp HHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSS------CEEECC--CEEE
T ss_pred HHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCC------CEEecCCCCCeE
Confidence 88876 789999999999998889999999999999999999998654 4555666 899999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHH
Q psy1960 319 FIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLF 368 (428)
Q Consensus 319 iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~ 368 (428)
||++|||+|+|++.+++|+|.|+||.|++.+|+|||+++||+|+++|+++
T Consensus 220 iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 269 (452)
T 3my7_A 220 VIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH 269 (452)
T ss_dssp EECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998764
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-47 Score=395.04 Aligned_cols=245 Identities=13% Similarity=0.016 Sum_probs=214.1
Q ss_pred EeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch--
Q psy1960 103 FYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS-- 178 (428)
Q Consensus 103 v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~-- 178 (428)
++.++.++ ++++++|+ ||+.|+.++.++|. ++|+++ +++ ++++.+ ....+...++|++..+++..
T Consensus 6 ~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~e~~~~~~ 74 (464)
T 3k9d_A 6 KDLRSIQEVRNLIESANKAQKELAAMSQQQID-------TIVKAI-ADA--GYGARE-KLAKMAHEETGFGIWQDKVIKN 74 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCSCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhCcCHHHHHHHHH
Confidence 34567788 99999999 99999999999999 999999 999 999888 77777888999998765431
Q ss_pred -----hh-hhhhc---------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHH
Q psy1960 179 -----AL-TFYLE---------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTI 242 (428)
Q Consensus 179 -----~l-~~~~~---------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l 242 (428)
.+ +|+.. ..+...+.++.|+|||++|+|||||+.+.++++++||+ ||+||+|||+.+|+++..+
T Consensus 75 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l 154 (464)
T 3k9d_A 75 VFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILET 154 (464)
T ss_dssp HHHHHHHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH
T ss_pred HHHHHHHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHH
Confidence 11 12211 11234566788999999999999999999999999998 9999999999999999986
Q ss_pred HH----HHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecC-CCce
Q psy1960 243 YK----IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECG-GKNF 317 (428)
Q Consensus 243 ~~----ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElG-Gkn~ 317 (428)
++ ++.++|+|+|++|+|+|++.+.++.|+.||+|++|+||||+++ .++++++++ |+ +|+| ||||
T Consensus 155 ~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~k------pv-lelG~G~~p 223 (464)
T 3k9d_A 155 VRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGT------PA-IGVGPGNGP 223 (464)
T ss_dssp HHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSS------CE-EEBCCCCCE
T ss_pred HHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCC------cE-EeeCCCCCe
Confidence 55 5688999999999999988899999999999999999999984 455666666 78 7888 9999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHH
Q psy1960 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFL 369 (428)
Q Consensus 318 ~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l 369 (428)
+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++.
T Consensus 224 ~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~ 275 (464)
T 3k9d_A 224 AFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQG 275 (464)
T ss_dssp EEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTT
T ss_pred EEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999875
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-46 Score=389.55 Aligned_cols=244 Identities=15% Similarity=0.088 Sum_probs=204.8
Q ss_pred HhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Ccccc----
Q psy1960 108 PVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGRM---- 177 (428)
Q Consensus 108 ~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~~---- 177 (428)
.++ ++|+++|+ ||+.|+.+|.++|. ++|+++ +++ |+++.+ ....+...+.|++. .+++.
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~gk~~~~g~~ea~~~~~~ 93 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKN-------AALEAV-ARA--IERDAG-ALKAANARDVARAKDKGLDAAFVDRLT 93 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHH-------HHHHHH-HHH--HHHSHH-HHHHHHHHHHCC------CCSHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHH-------HHHHHH-HHH--HHhhHH-HHHHHHHHHHhhhhhccchHHHHHHhh
Confidence 467 99999999 99999999999999 999999 999 999887 66666677777763 34331
Q ss_pred ----------hhhhhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCC
Q psy1960 178 ----------SALTFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPS 232 (428)
Q Consensus 178 ----------~~l~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs 232 (428)
+.+++++.. .+...+.++.|+|||++|+||| | ....++++|||+ ||+||+|||
T Consensus 94 ~~~~~v~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps 171 (444)
T 4ghk_A 94 LSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGG 171 (444)
T ss_dssp CCTTHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECC
T ss_pred ccHHHHHHHHHHHHHHHhhccccCccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECC
Confidence 234554321 1223466788999999999999 8 578899999998 999999999
Q ss_pred ccchHHHHHHHHHH----HHcCCCCccEEEeeCCCh-hhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 233 DTALLSNYTIYKIM----IEAGVPPGVVNFVPADGP-VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 233 ~~apl~a~~l~~ll----~eAGlP~gvv~vv~g~g~-~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
+.+|+++..+++++ .++|+|+|++|+++|++. ++++.|..||+|++|+||||+.+|+.+++++ ++ |
T Consensus 172 ~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~------p 242 (444)
T 4ghk_A 172 SEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RV------P 242 (444)
T ss_dssp GGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CS------C
T ss_pred ccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CC------C
Confidence 99999999999997 799999999999998665 5788899999999999999999999998765 44 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||++++|+|+++|+++++++++
T Consensus 243 v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 308 (444)
T 4ghk_A 243 MIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGV 308 (444)
T ss_dssp BCCCCCCCCEEEECTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999 9999999999999999999999999999987
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-46 Score=385.65 Aligned_cols=246 Identities=14% Similarity=0.066 Sum_probs=214.0
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Cccc------
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGR------ 176 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~------ 176 (428)
++ ++++++|+ ||+.|+.+|..+|. ++|+++ +++ |+++.+ ....+...+.|++. .++.
T Consensus 14 ~~~~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-~la~~~~~e~gk~~~~g~~ea~~~~~~~ 82 (427)
T 1o20_A 14 DELLEKAKKVREAWDVLRNATTREKN-------KAIKKI-AEK--LDERRK-EILEANRIDVEKARERGVKESLVDRLAL 82 (427)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHTTCCHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHhhccccccccHHHHHHHhc
Confidence 35 99999999 99999999999999 999999 999 999887 66666666667653 3322
Q ss_pred --------chhhhhhhcc----c----------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCc
Q psy1960 177 --------MSALTFYLEV----L----------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSD 233 (428)
Q Consensus 177 --------~~~l~~~~~~----~----------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~ 233 (428)
.+.+++++.. + +...+.++.|+|||++|+||| | ....++++|||+ ||+||+|||+
T Consensus 83 ~~~ev~~~~~~l~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p-~-~~~~~~~~~ALaaGNtVVlKps~ 160 (427)
T 1o20_A 83 NDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESR-P-NVTVETTILALKSGNTILLRGGS 160 (427)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSC-T-HHHHHHHHHHHHTTCCEEEECCG
T ss_pred CHHHHHHHHHHHHHHHhcccccCccccccccCCCceeEEEeecceeEEEEecCC-h-HHHHHHHHHHHHcCCEEEEECCH
Confidence 1345565431 0 112356778899999999987 4 578899999998 9999999999
Q ss_pred cchHHHHHHHHHHH----HcCCCCccEEEeeCC-ChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcE
Q psy1960 234 TALLSNYTIYKIMI----EAGVPPGVVNFVPAD-GPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRL 308 (428)
Q Consensus 234 ~apl~a~~l~~ll~----eAGlP~gvv~vv~g~-g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~ 308 (428)
.+|+++..+++++. ++|+|+|++|+|+|+ ++++++.|..||+|++|+||||+++|+.|++++ .+ |+
T Consensus 161 ~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~------~v 231 (427)
T 1o20_A 161 DALNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TV------PV 231 (427)
T ss_dssp GGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SS------CB
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CC------CE
Confidence 99999999999998 679999999999984 567889999999999999999999999998876 34 89
Q ss_pred EEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceE
Q psy1960 309 IGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVF 377 (428)
Q Consensus 309 ~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~ 377 (428)
++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||++++|+|+++|+++++++++.+.
T Consensus 232 ~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~ 299 (427)
T 1o20_A 232 LETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVR 299 (427)
T ss_dssp CCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCeee
Confidence 9999999999999999999999999999999999 9999999999999999999999999999987543
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-46 Score=388.58 Aligned_cols=239 Identities=12% Similarity=0.088 Sum_probs=208.0
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCC----Cccc--------c
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPF----GGGR--------M 177 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~----~~~~--------~ 177 (428)
++|+++|+ ||+.|+.++.++|. ++|+++ +++ |+++.+ ....+...+.|||. .++. .
T Consensus 17 ~~av~aA~~A~~~w~~~~~~~R~-------~~L~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~ 85 (468)
T 1vlu_A 17 QQIAKNARKAGNILKTISNEGRS-------DILYKI-HDA--LKANAH-AIEEANKIDLAVAKETGLADSLLKRLDLFKG 85 (468)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHSSCCHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCcccccccchHHHHHHhhhhH
Confidence 89999999 99999999999999 999999 999 999988 77777788888886 5542 1
Q ss_pred hhhhhhhc-------------c--c------cccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccc
Q psy1960 178 SALTFYLE-------------V--L------ASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 235 (428)
Q Consensus 178 ~~l~~~~~-------------~--~------~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~a 235 (428)
+.+++++. . . +...+..+.|+|||++|+||| | ....++++|||+ ||+||+|||+.+
T Consensus 86 ~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~t 163 (468)
T 1vlu_A 86 DKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKES 163 (468)
T ss_dssp THHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCcc
Confidence 22333321 0 0 112356778899999999999 9 889999999999 999999999999
Q ss_pred hHHHHHHHHHHH----H----cCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 236 LLSNYTIYKIMI----E----AGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 236 pl~a~~l~~ll~----e----AGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
|+++..++++++ + +|+|+|++|+|+ +++++++.|..||+|++|+||||+++|+.|++++ ++ |
T Consensus 164 p~t~~~l~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~k------p 233 (468)
T 1vlu_A 164 VNTFREMAKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KI------P 233 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CS------C
T ss_pred HHHHHHHHHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CC------C
Confidence 999999999995 8 999999999999 7778899999999999999999999999998876 44 8
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+++|+|||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ |+|+++|.++++++++
T Consensus 234 v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v 298 (468)
T 1vlu_A 234 VLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGV 298 (468)
T ss_dssp BTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCC
T ss_pred EEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999 99999999999999 9999999999999886
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 428 | ||||
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-33 | |
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-32 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 2e-30 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 4e-23 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 8e-20 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 8e-17 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 5e-05 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-10 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 3e-04 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 7e-05 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-04 |
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 128 bits (324), Expect = 2e-33
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G+ V+ K ++ L+ + ++ EAG PPGVVN
Sbjct: 154 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVN 213
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
VP GP G I + + + FTGS + + G N R+ E GGK+
Sbjct: 214 IVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS-----SNLKRVTLELGGKSP 268
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ I + A+++ V + F GQ A SR +V E ++
Sbjct: 269 NIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIY 309
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 126 bits (318), Expect = 1e-32
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPAL-MGSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVN 257
G + P+NF + PAL G++V+ KP++ L+ + ++ EAG PPGVVN
Sbjct: 154 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVN 213
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
VP GP G I++ + + FTGS + GK+ N R+ E GGK+
Sbjct: 214 IVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKS-----NLKRVSLELGGKSP 268
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358
+ A A++++ V + F + GQ C A SR++V ES++
Sbjct: 269 CIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 309
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 120 bits (301), Expect = 2e-30
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 206 PFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGP 264
+N+ + PAL G++V++KPS ++ + +I EAGVP G+VN V
Sbjct: 164 AWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAE 223
Query: 265 VFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASA 324
G + P +A ++FTGSVPT ++ K + + E GGK+ I
Sbjct: 224 T-GSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKTV------KHVTLELGGKSPLLIFKDC 276
Query: 325 NVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
+E+ V G + + F GQ C+ +R++V + ++
Sbjct: 277 ELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV 318
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 99.1 bits (246), Expect = 4e-23
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 8/163 (4%)
Query: 203 AVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPA 261
+++P+N+ + PAL G+ V+ KPS+ L+ + ++ + P GVVN +
Sbjct: 144 SIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAEL-AKDIFPAGVVNILFG 202
Query: 262 DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIH 321
G GD +T P + ++ TGS+ T + + + R E GGK +
Sbjct: 203 RGKTVGDPLTGHPKVRMVSLTGSIATGEHII------SHTASSIKRTHMELGGKAPVIVF 256
Query: 322 ASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCF 364
A++E+VV G + GQ C+A R+Y + ++
Sbjct: 257 DDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEK 299
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 89.2 bits (220), Expect = 8e-20
Identities = 50/167 (29%), Positives = 73/167 (43%), Gaps = 9/167 (5%)
Query: 199 GFVAAVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTAL-LSNYTIYKIMIEAGVPPGVVN 257
G V A+SPFN+ PAL+ +V+ T +S + + EAG+P GV N
Sbjct: 144 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 203
Query: 258 FVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNF 317
+ G GD I + INFTGS +G+ I ++ E GGK+
Sbjct: 204 TITGRGSEIGDYIVEHQAVNFINFTGST--------GIGERIGKMAGMRPIMLELGGKDS 255
Query: 318 HFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCF 364
+ A++E I AF Y GQ+C+A R+ V ES+
Sbjct: 256 AIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEK 302
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 79.9 bits (196), Expect = 8e-17
Identities = 64/345 (18%), Positives = 117/345 (33%), Gaps = 24/345 (6%)
Query: 35 PEWTYLPGSKEREAITAALKRVGSTV-EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMP 93
P T+ R A+ AL+RV P+ IG + T+ + ++ P
Sbjct: 10 PIETFQTEE-ARRAMREALRRVREEFGRHYPLYIGGEWVDTK--ERMVSLN--------P 58
Query: 94 HNHKKKIAKFYYATP--------VLKSALDIVSSLCPYEKNSVGLLI--NTEVLHDDLYF 143
+ + A A +++ + L +L
Sbjct: 59 SAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSRLLLKAAALMRRRKRELEA 118
Query: 144 RCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLD-GFVA 202
+ ++ + + R + + G
Sbjct: 119 TLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGV 178
Query: 203 AVSPFNFTAIGGNLAYTPALMGSSVLWKPSDTAL-LSNYTIYKIMIEAGVPPGVVNFVPA 261
++P+NF + + + + +++I EAG PPGVVNF+P
Sbjct: 179 VIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPG 238
Query: 262 DGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIH 321
G G + P + INFTGS+ +++ G+ F R E GGKN +
Sbjct: 239 VGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVD 298
Query: 322 ASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLL 366
+A+ + G + SA+ + GQKCSA SR+ + + + +L
Sbjct: 299 ETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVL 343
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 42.9 bits (100), Expect = 5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 10/44 (22%)
Query: 153 AGNYYINDKSTGSVVGQQPFGG----------GRMSALTFYLEV 186
GN Y N K TG++VG QPFGG G + L +LE+
Sbjct: 466 VGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEM 509
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 58.4 bits (140), Expect = 5e-10
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 6/81 (7%)
Query: 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEY 340
+TGS + K++ + E GGK+ ++ +++ F
Sbjct: 184 YTGSTAVGKIVMAAAAKHLT------PVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMN 237
Query: 341 CGQKCSACSRMYVPESLFCFC 361
GQ C A + S+
Sbjct: 238 SGQTCVAPDYILCDPSIQNQI 258
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 40.7 bits (94), Expect = 3e-04
Identities = 12/48 (25%), Positives = 14/48 (29%), Gaps = 11/48 (22%)
Query: 153 AGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRGEGLDGF 200
+G ND V PFGG S +G G F
Sbjct: 381 SGGVTANDVIVHITVPTLPFGGVGNSG-----------MGAYHGKKSF 417
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 42.4 bits (98), Expect = 7e-05
Identities = 15/65 (23%), Positives = 22/65 (33%), Gaps = 8/65 (12%)
Query: 143 FRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMSALTFYLEVLASNLGRG--EGLDGF 200
+ + L+ AG N TG VG GG A T S E + +
Sbjct: 416 SQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTH------SASTSVGAEAIHRW 469
Query: 201 VAAVS 205
+ V+
Sbjct: 470 LRPVA 474
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 40.3 bits (93), Expect = 3e-04
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 294 QVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMY 352
+VG+ + + + E GG + + A+++ + R + Y GQ+C A +
Sbjct: 244 EVGERVVKVGGVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 302
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 428 | |||
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 99.98 |
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=5.4e-63 Score=519.50 Aligned_cols=323 Identities=23% Similarity=0.277 Sum_probs=292.0
Q ss_pred ccCCCCCCCCCCCcHHHHHHHHHHHHhccC-CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCH
Q psy1960 30 NVQETPEWTYLPGSKEREAITAALKRVGST-VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATP 108 (428)
Q Consensus 30 ~~~n~p~~~~~~~s~~r~~~~~al~~~~~~-~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~ 108 (428)
+|+|||.++|..++ +|.++++++++++.. .+++|+||||+|+.+++... ++||.++++++++++.++.
T Consensus 5 ~~~nep~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~I~G~~v~s~~~~~----------~~nP~~tge~i~~~~~a~~ 73 (516)
T d1uzba_ 5 PFRNEPIETFQTEE-ARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMV----------SLNPSAPSEVVGTTAKAGK 73 (516)
T ss_dssp CCCCCCCCCCCSHH-HHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEE----------EEETTEEEEEEEEEECCCH
T ss_pred CCCCCCCCCCCCch-HHHHHHHHHHHHHHhcCCCCCeEEcCEEECCCCCeE----------EeCCCCCCeEEEEEcCCCH
Confidence 69999999997655 566799999998766 57889999999999877655 7899766899999999999
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hh
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------AL 180 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l 180 (428)
+| ++|+++|+ ||+.|+++|.++|. ++|+++ +++ |+++.+ ....+...++|+|+.+++.+ .+
T Consensus 74 ~dv~~Av~aA~~A~~~W~~~s~~~R~-------~iL~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~ev~~~~~~~ 142 (516)
T d1uzba_ 74 AEAEAALEAAWKAFKTWKDWPQEDRS-------RLLLKA-AAL--MRRRKR-ELEATLVYEVGKNWVEASADVAEAIDFI 142 (516)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHhCCCccccchhHHHHHHHH
Confidence 99 99999999 99999999999999 999999 999 999988 77778889999998776543 34
Q ss_pred hhhhcc--------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 181 TFYLEV--------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 181 ~~~~~~--------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
++++.. .......++.|+|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..+.++
T Consensus 143 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~ 222 (516)
T d1uzba_ 143 EYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEI 222 (516)
T ss_dssp HHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHHHhhhhcccccccccccceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHH
Confidence 444321 1223456677899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
+.++|+|+|++|+|+|+++++++.|+.||+|++|.||||+++|+.|++.+++....+.+++|+++|+|||||+||++|||
T Consensus 223 ~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd 302 (516)
T d1uzba_ 223 FHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETAD 302 (516)
T ss_dssp HHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSC
T ss_pred HHHhCcCcCeEEEccCChHHHHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchh
Confidence 99999999999999999999999999999999999999999999999999876666677779999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v 374 (428)
+|.|++.+++++|.++||.|++++|++||++++|+|+++++++++++++
T Consensus 303 ~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~d~~~~~~~~~~~~l~~ 351 (516)
T d1uzba_ 303 FDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred HHHHHHHHhhhhcccCCCcccccCccccccccccchhhHHHHHHHhccc
Confidence 9999999999999999999999999999999999999999999998775
|
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=6.1e-59 Score=486.17 Aligned_cols=304 Identities=22% Similarity=0.220 Sum_probs=268.6
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhhh
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEVL 137 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~~ 137 (428)
.++||||+|+.+.+...++ ++||+| ++++++++.++.+| +.||++|+ ||+ .|+.+|.++|.
T Consensus 14 ~~~yI~G~w~~~~s~~~~~--------v~nP~t-~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~----- 79 (494)
T d1bxsa_ 14 TKIFINNEWHSSVSGKKFP--------VFNPAT-EEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERG----- 79 (494)
T ss_dssp CSEEETTEEECCTTCCEEE--------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH-----
T ss_pred CCEEECCEecCCCCCCEEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHH-----
Confidence 3799999999876554444 889999 89999999999999 99999999 985 69999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++++ ....+...++|||+.+... +.+++++.. .....+..+.|+
T Consensus 80 --~iL~ki-a~~--L~~~~e-ela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~ 153 (494)
T d1bxsa_ 80 --RLLNKL-ADL--IERDRL-LLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPV 153 (494)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHhCHH-HHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccE
Confidence 999999 999 999988 7777888999999876432 234454431 223456677889
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....++++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|+
T Consensus 154 GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~ 233 (494)
T d1bxsa_ 154 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 233 (494)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCS
T ss_pred EEEEEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999889999999999999
Q ss_pred EEEeeCChhhHHHHHHHHhc-ccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVGK-NINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a~-~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|+||||+++|+.|++.+++ +++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||++
T Consensus 234 ~i~fTGS~~~g~~i~~~aa~~~~~------~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~ 307 (494)
T d1bxsa_ 234 KVAFTGSTEVGKLIKEAAGKSNLK------RVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEES 307 (494)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHH
T ss_pred EEEecCCHHHHHHHHHHhcccCCC------eEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccc
Confidence 99999999999999998885 566 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCCcceEEEeehhhhccc--ccccCCcccccchHH
Q psy1960 357 LFCFCSCFLLLFLFSASVPVFCFCSCFLLLFL--FSTSVPVFCFCSCFL 403 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 403 (428)
++|+|+++|+++++++++ |.| -.+.++|+.-....+
T Consensus 308 ~~d~f~~~l~~~~~~~~~-----------g~~~~~~~~~gpli~~~~~~ 345 (494)
T d1bxsa_ 308 IYDEFVRRSVERAKKYVL-----------GNPLTPGVSQGPQIDKEQYE 345 (494)
T ss_dssp HHHHHHHHHHHHHTCCCB-----------SCTTSTTCCBCCCSCHHHHH
T ss_pred hhHHHHHHHHhhhhheee-----------eccCCCCCcCCCcCCHHHHH
Confidence 999999999999998653 444 355677776555443
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.6e-58 Score=476.00 Aligned_cols=285 Identities=20% Similarity=0.286 Sum_probs=258.0
Q ss_pred ccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 62 EVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 62 ~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
+.++||||+|+.+++. .++ ++||+| ++++++++.++.+| ++|+++|+ ||+.|+++|.++|.
T Consensus 2 ~~~l~I~G~~v~~~g~-~~~--------v~nP~t-g~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~------- 64 (474)
T d1wnda_ 2 QHKLLINGELVSGEGE-KQP--------VYNPAT-GDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRA------- 64 (474)
T ss_dssp CCCEEETTEEECCCSC-EEE--------EEETTT-TEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------
T ss_pred CCccEECCeEeCCCCC-eee--------eECCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------
Confidence 3579999999987643 334 889999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch-------hhhhhhc-------------cccccceeeecccc
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS-------ALTFYLE-------------VLASNLGRGEGLDG 199 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~-------~l~~~~~-------------~~~~~~~~~~~p~G 199 (428)
++|+++ +++ |+++.+ ....+...++|||+.++..+ ..+++.. ......+.++.|+|
T Consensus 65 ~iL~~~-a~~--l~~~~~-ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 140 (474)
T d1wnda_ 65 ECLLKL-ADV--IEENGQ-VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLG 140 (474)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECS
T ss_pred HHHHHH-HHH--HHhCHH-HHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEeccc
Confidence 999999 999 999988 77778899999998766432 2222221 11234567788899
Q ss_pred eEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeE
Q psy1960 200 FVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAG 278 (428)
Q Consensus 200 VV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~ 278 (428)
||++|+|||||+....++++|||+ ||+||+|||+.+|+++..+++++++ ++|+|++|+|+|+++++++.|++||+|++
T Consensus 141 VV~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~ 219 (474)
T d1wnda_ 141 VVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRM 219 (474)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEE
T ss_pred ceEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCE
Confidence 999999999999999999999998 9999999999999999999999976 49999999999999899999999999999
Q ss_pred EEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCch
Q psy1960 279 INFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLF 358 (428)
Q Consensus 279 I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~ 358 (428)
|.||||+++|+.|.+.++++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++|
T Consensus 220 v~fTGS~~~G~~i~~~a~~~~k------~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~ 293 (474)
T d1wnda_ 220 VSLTGSIATGEHIISHTASSIK------RTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIY 293 (474)
T ss_dssp EEEESCHHHHHHHHHHHGGGTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTH
T ss_pred EEeeCCHHHHHHHHHhhhcCCC------eEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccc
Confidence 9999999999999999999988 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCc
Q psy1960 359 CFCSCFLLLFLFSASV 374 (428)
Q Consensus 359 d~f~~~L~~~l~~l~v 374 (428)
|+|+++|+++++++++
T Consensus 294 d~~~~~l~~~~~~l~~ 309 (474)
T d1wnda_ 294 DTLVEKLGAAVATLKS 309 (474)
T ss_dssp HHHHHHHHHHHHTCCB
T ss_pred hhhhhhhHHHHHhhcc
Confidence 9999999999998763
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=7e-58 Score=478.13 Aligned_cols=285 Identities=22% Similarity=0.248 Sum_probs=258.2
Q ss_pred cCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC---ccccCChhhhhhhhhh
Q psy1960 63 VPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC---PYEKNSVGLLINTEVL 137 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~---~W~~~~~~~R~~~~~~ 137 (428)
.++||||+|+++.+..+++ ++||+| ++++++++.++.+| ++|+++|+ ||+ .|++++.++|.
T Consensus 14 ~~~~I~G~w~~~~~~~~~~--------v~nP~t-g~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa----- 79 (494)
T d1o04a_ 14 NQIFINNEWHDAVSRKTFP--------TVNPST-GEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRG----- 79 (494)
T ss_dssp CSEEETTEEECCTTCCEEE--------EEETTT-TEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHH-----
T ss_pred CCeEECCEecCCCCCCEEE--------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHH-----
Confidence 4799999999876655444 889999 89999999999999 99999999 885 59999999999
Q ss_pred HHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhhhhcc------------ccccceeeeccc
Q psy1960 138 HDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTFYLEV------------LASNLGRGEGLD 198 (428)
Q Consensus 138 ~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~~~~~------------~~~~~~~~~~p~ 198 (428)
++|+++ +++ |+++.+ ....+...++|||..++.. +.+++++.. .....+.+++|+
T Consensus 80 --~iL~~~-a~~--l~~~~e-ela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~ 153 (494)
T d1o04a_ 80 --RLLNRL-ADL--IERDRT-YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPV 153 (494)
T ss_dssp --HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEEC
T ss_pred --HHHHHH-HHH--HHHhHH-HHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecc
Confidence 999999 999 999988 7777888999999876542 234454431 223356778899
Q ss_pred ceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCee
Q psy1960 199 GFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLA 277 (428)
Q Consensus 199 GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~ 277 (428)
|||++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+|++.++++.|+.||+|+
T Consensus 154 GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~ 233 (494)
T d1o04a_ 154 GVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVD 233 (494)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCC
T ss_pred cEEEEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcC
Confidence 9999999999999999999999998 999999999999999999999999999999999999999889999999999999
Q ss_pred EEEeeCChhhHHHHHHHHh-cccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCC
Q psy1960 278 GINFTGSVPTFNRLWLQVG-KNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPES 356 (428)
Q Consensus 278 ~I~fTGS~~~g~~i~~~~a-~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~s 356 (428)
+|.||||+++|+.|+++++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++
T Consensus 234 ~v~fTGS~~~g~~i~~~aa~~~~~------~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~ 307 (494)
T d1o04a_ 234 KVAFTGSTEIGRVIQVAAGSSNLK------RVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQED 307 (494)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCC------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHH
T ss_pred EEEEeCCHHHHHHHHHHhhccCCC------eEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccch
Confidence 9999999999999998876 5666 89999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHhcCC
Q psy1960 357 LFCFCSCFLLLFLFSAS 373 (428)
Q Consensus 357 i~d~f~~~L~~~l~~l~ 373 (428)
++|+|+++|++++++++
T Consensus 308 i~d~f~~~l~~~~~~~~ 324 (494)
T d1o04a_ 308 IYDEFVERSVARAKSRV 324 (494)
T ss_dssp HHHHHHHHHHHHHHHCC
T ss_pred hhHHHHHHHHHHhhhee
Confidence 99999999999999865
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.8e-57 Score=474.53 Aligned_cols=285 Identities=20% Similarity=0.254 Sum_probs=260.9
Q ss_pred cCeEEcCEEeecCCee-eeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHH
Q psy1960 63 VPIVIGSKEYKTEHVQ-YQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHD 139 (428)
Q Consensus 63 ip~~IgG~~v~s~~~~-~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~ 139 (428)
...||||+|+++.+.. +.+ ++||+| ++++++++.++.+| ++||++|+ ||+.|++++..+|.
T Consensus 20 ~~n~I~G~~v~~~~g~~~~~--------V~nP~t-ge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~------- 83 (503)
T d1a4sa_ 20 DLNYWGGRRIKSKDGATTEP--------VFEPAT-GRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERS------- 83 (503)
T ss_dssp CCEEETTEEECCCTTCCCEE--------EECTTT-CCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHH-------
T ss_pred CCeEECCEEeCCCCCCeeee--------eecCCC-CCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH-------
Confidence 3479999999886543 223 689999 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhc------------cccccceeeecccceE
Q psy1960 140 DLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLE------------VLASNLGRGEGLDGFV 201 (428)
Q Consensus 140 ~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~------------~~~~~~~~~~~p~GVV 201 (428)
++|+++ +++ |+++++ ....+...++|||+.+++.+ .+++++. +++...+..+.|.|||
T Consensus 84 ~iL~~~-a~~--L~~~~e-ela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv 159 (503)
T d1a4sa_ 84 RVMLEA-ARI--IRERRD-NIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC 159 (503)
T ss_dssp HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEE
T ss_pred HHHHHH-HHH--HHHhHH-HHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccccCCCcccccccccceee
Confidence 999999 999 999988 77788899999999877653 4555543 1233456778889999
Q ss_pred EEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEE
Q psy1960 202 AAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGIN 280 (428)
Q Consensus 202 ~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~ 280 (428)
++|+|||||+....+++++||+ ||+||+|||+.+|+++..++++++++|+|+|++|+|+| +.++++.|+.||+|++|+
T Consensus 160 ~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g-~~e~g~~L~~~~~v~~V~ 238 (503)
T d1a4sa_ 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVS 238 (503)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTCCEEE
T ss_pred ecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC-CHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999998 99999999999999999999999999999999999999 568999999999999999
Q ss_pred eeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHH
Q psy1960 281 FTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCF 360 (428)
Q Consensus 281 fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~ 360 (428)
||||+++|+.|++.++++++ |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|||++++++
T Consensus 239 fTGS~~~G~~i~~~aa~~~~------~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~ 312 (503)
T d1a4sa_ 239 FTGSVPTGKKVMEMSAKTVK------HVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312 (503)
T ss_dssp EESCHHHHHHHHHHHHTTTC------EEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHH
T ss_pred EeCCHHHHHHHHHHhhhcCC------cEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhh
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCc
Q psy1960 361 CSCFLLLFLFSASV 374 (428)
Q Consensus 361 f~~~L~~~l~~l~v 374 (428)
|++++.+.++++++
T Consensus 313 ~~~~l~~~~~~~~~ 326 (503)
T d1a4sa_ 313 FLEEVVKRTKAIVV 326 (503)
T ss_dssp HHHHHHHHHHTCCB
T ss_pred HHHHHHHhhhhEee
Confidence 99999999998774
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=2.2e-53 Score=441.15 Aligned_cols=284 Identities=20% Similarity=0.222 Sum_probs=257.7
Q ss_pred cccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhH
Q psy1960 61 EEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLH 138 (428)
Q Consensus 61 ~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~ 138 (428)
+.+++||||+|+.+++... ++||.| |+++++++.++.+| ++|+++|+ |++.|+++|.++|.
T Consensus 2 k~~~n~I~G~~~~~~~~~~----------v~~P~t-g~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~------ 64 (474)
T d1euha_ 2 KQYKNYVNGEWKLSENEIK----------IYEPAS-GAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA------ 64 (474)
T ss_dssp CBCCEEETTEEECCSSEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH------
T ss_pred ccccceecCeecCCCCCEE----------EeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHH------
Confidence 4679999999998877655 899998 89999999999999 99999999 99999999999999
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc------------------ccccceee
Q psy1960 139 DDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV------------------LASNLGRG 194 (428)
Q Consensus 139 ~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~------------------~~~~~~~~ 194 (428)
++|+++ +++ |+++.+ ....+...++||+..+++.+ .++++... .....+.+
T Consensus 65 -~iL~~~-a~~--L~~~~~-~la~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (474)
T d1euha_ 65 -AYLHKV-ADI--LMRDKE-KIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVR 139 (474)
T ss_dssp -HHHHHH-HHH--HHHTHH-HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEE
T ss_pred -HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEE
Confidence 999999 999 999988 77778889999998776553 23333220 11223567
Q ss_pred ecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhcC
Q psy1960 195 EGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITAS 273 (428)
Q Consensus 195 ~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~~ 273 (428)
++|+|||++|+|||||+......++|||+ ||+||+|||+.+|+++..++++++++|+|+|++|+++|++.++++.|+.|
T Consensus 140 r~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~ 219 (474)
T d1euha_ 140 REPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEH 219 (474)
T ss_dssp EEECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHC
T ss_pred eeceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhC
Confidence 88899999999999999999999999998 99999999999999999999999999999999999999988999999999
Q ss_pred CCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEE
Q psy1960 274 PYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYV 353 (428)
Q Consensus 274 ~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V 353 (428)
|+|+.|.||||+++++.+.+.++ .+ |+++|+||+||+||++|||+|.|++.+++++|.++||.|++++++||
T Consensus 220 ~~v~~v~ftGs~~~~~~i~~~a~--~k------~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v 291 (474)
T d1euha_ 220 QAVNFINFTGSTGIGERIGKMAG--MR------PIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLV 291 (474)
T ss_dssp TTCCEEEEESCHHHHHHHHHHTT--TS------CEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEE
T ss_pred CCccEEEecCccccccchhhhcc--cc------eEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccch
Confidence 99999999999999999988765 33 89999999999999999999999999999999999999999999999
Q ss_pred eCCchHHHHHHHHHHHhcCCc
Q psy1960 354 PESLFCFCSCFLLLFLFSASV 374 (428)
Q Consensus 354 ~~si~d~f~~~L~~~l~~l~v 374 (428)
|++++++|++.++++...+++
T Consensus 292 ~~~~~~~~~~~l~~~~~~~~~ 312 (474)
T d1euha_ 292 MESVADELVEKIREKVLALTI 312 (474)
T ss_dssp EHHHHHHHHHHHHHHHHTSCB
T ss_pred hhhhhhhhhHhhhhhhhhccc
Confidence 999999999999999998774
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=4.4e-52 Score=434.57 Aligned_cols=303 Identities=19% Similarity=0.163 Sum_probs=266.6
Q ss_pred CcccCeEEcCEEeecCCeeeeccccccccccccCCCCCeeEEEEeCCCHhH-HHHHHHHh-ccC-ccccCChhhhhhhhh
Q psy1960 60 VEEVPIVIGSKEYKTEHVQYQPMVSLHVQYQPMPHNHKKKIAKFYYATPVL-KSALDIVS-SLC-PYEKNSVGLLINTEV 136 (428)
Q Consensus 60 ~~~ip~~IgG~~v~s~~~~~~~~~~~~~~~~~~P~~~g~~ia~v~~a~~~~-~~Av~aA~-A~~-~W~~~~~~~R~~~~~ 136 (428)
...+++||||+|+.+++... ++||.| ++++++++.++.+| ++|+++|+ +++ .|+++|.++|+
T Consensus 14 ~~~~~~~I~G~~~~sg~~~~----------v~~P~t-~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~---- 78 (499)
T d1ky8a_ 14 VPVYPSYLAGEWGGSGQEIE----------VKSPID-LATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERL---- 78 (499)
T ss_dssp EEEECEECSSSEECCSCEEE----------EECTTT-CCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHH----
T ss_pred CCCCCCEECCeECCCCCeEE----------eeCCCC-CCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHH----
Confidence 45688999999998766554 899999 79999999999999 99999998 766 79999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch------hhhhhhcc-----------------cccccee
Q psy1960 137 LHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS------ALTFYLEV-----------------LASNLGR 193 (428)
Q Consensus 137 ~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~------~l~~~~~~-----------------~~~~~~~ 193 (428)
++|+++ +++ |+++.+ ....+...++|||..+++.| .++|++.. .....+.
T Consensus 79 ---~iL~~~-a~~--l~~~~~-~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (499)
T d1ky8a_ 79 ---AVLRKA-ADI--IERNLD-VFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLV 151 (499)
T ss_dssp ---HHHHHH-HHH--HHHTHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEE
T ss_pred ---HHHHHH-HHH--HHHhHH-HHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceecccccccccccccee
Confidence 999999 999 999988 77778888999998877643 45555431 1123457
Q ss_pred eecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHHHHHcCCCCccEEEeeCCChhhhhhhhc
Q psy1960 194 GEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKIMIEAGVPPGVVNFVPADGPVFGDTITA 272 (428)
Q Consensus 194 ~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~ll~eAGlP~gvv~vv~g~g~~~g~~L~~ 272 (428)
.++|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..+.+++.++|+|+++++++.+++. .+..|+.
T Consensus 152 ~r~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~-~~~~l~~ 230 (499)
T d1ky8a_ 152 RREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGK-EAEKIVA 230 (499)
T ss_dssp EEEECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGG-GGHHHHH
T ss_pred eeeccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChH-HHHHHhh
Confidence 788899999999999999999999999998 99999999999999999999999999999999999999764 5888999
Q ss_pred CCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEE
Q psy1960 273 SPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMY 352 (428)
Q Consensus 273 ~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~ 352 (428)
||+++.+.||||+.+++.+.+.++. + |+++|+|||||+||++|||+|.|++.+++++|.++||.|++++|+|
T Consensus 231 ~~~i~~v~ftGs~~~g~~i~~~~~~--~------~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~ 302 (499)
T d1ky8a_ 231 DDRVAAVSFTGSTEVGERVVKVGGV--K------QYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVL 302 (499)
T ss_dssp CTTCCEEEEESCHHHHHHHHHHHCS--S------EEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEE
T ss_pred ccceeEEEeecccccceEEeecccc--c------ceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCccccccccccc
Confidence 9999999999999999999887643 3 8999999999999999999999999999999999999999999999
Q ss_pred EeCCchHHHHHHHHHHHhcCCcceEEEeehhhhccc--ccccCCcccccchHHH
Q psy1960 353 VPESLFCFCSCFLLLFLFSASVPVFCFCSCFLLLFL--FSTSVPVFCFCSCFLL 404 (428)
Q Consensus 353 V~~si~d~f~~~L~~~l~~l~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 404 (428)
||++++|+|+++|+++++++++ |+| ..+.|+|+......+-
T Consensus 303 V~~~v~d~f~~~l~~~~~~l~~-----------G~p~~~~~~~gpli~~~~~~~ 345 (499)
T d1ky8a_ 303 AERPVYGKLVEEVAKRLSSLRV-----------GDPRDPTVDVGPLISPSAVDE 345 (499)
T ss_dssp EEHHHHHHHHHHHHHHHHTCCB-----------SCTTSTTCSBCCCSCHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhCcc-----------CCCCCccccccccchHHHHHH
Confidence 9999999999999999999764 444 4566777777665543
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.3e-50 Score=421.94 Aligned_cols=268 Identities=16% Similarity=0.127 Sum_probs=231.7
Q ss_pred cccCCCCCeeEE-EEeCCCHhH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHH
Q psy1960 90 QPMPHNHKKKIA-KFYYATPVL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSV 166 (428)
Q Consensus 90 ~~~P~~~g~~ia-~v~~a~~~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l 166 (428)
++||+| |++|+ +++.++++| ++|+++|+ ||+.|++++.++|. ++|+++ +++ |+++++ ....+...
T Consensus 7 ~~nP~t-ge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~-------~iL~~~-a~~--l~~~~~-~la~~~~~ 74 (504)
T d1ez0a_ 7 ATNAFT-GEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRA-------SLLRTI-ASE--LEARSD-DIIARAHL 74 (504)
T ss_dssp EECTTT-SSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHH
T ss_pred EECCCC-CCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHH
Confidence 789998 89997 799999999 99999999 99999999999999 999999 999 999988 77777888
Q ss_pred hcCCCCCcccch------hhhhhhcc---------------------ccccceeeecccceEEEECCCchhhhh--hHhh
Q psy1960 167 VGQQPFGGGRMS------ALTFYLEV---------------------LASNLGRGEGLDGFVAAVSPFNFTAIG--GNLA 217 (428)
Q Consensus 167 ~~gkp~~~~~~~------~l~~~~~~---------------------~~~~~~~~~~p~GVV~~I~P~NfP~~~--~~~~ 217 (428)
++|||..+++.| .++|+++. ........+.|+|||++|+|||||+.. ...+
T Consensus 75 e~Gkp~~~a~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~ 154 (504)
T d1ez0a_ 75 ETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGD 154 (504)
T ss_dssp HHCCCHHHHHHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHH
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHH
Confidence 999998776543 56666531 112334566689999999999999754 4468
Q ss_pred hhhhcC-CCEEEEeCCccchHHHHHHHH----HHHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHH
Q psy1960 218 YTPALM-GSSVLWKPSDTALLSNYTIYK----IMIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLW 292 (428)
Q Consensus 218 iapALa-GN~VVlKPs~~apl~a~~l~~----ll~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~ 292 (428)
++|||+ ||+||+|||+.+|.++..+.+ +++++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|+
T Consensus 155 ~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~ 234 (504)
T d1ez0a_ 155 TASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALF 234 (504)
T ss_dssp HHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccccccccccccccceeeeccchHHHHHHH
Confidence 999998 999999999999999877655 456779999999999999999999999999999999999999999999
Q ss_pred HHHhcccCcccCCCcEEEecCCCceeEEcCCCCHHHHH--HHHHHHHhhcCCCccccCceEEEeCCchH-HHHHHHHHHH
Q psy1960 293 LQVGKNINVYKNFPRLIGECGGKNFHFIHASANVESVV--NGTIRSAFEYCGQKCSACSRMYVPESLFC-FCSCFLLLFL 369 (428)
Q Consensus 293 ~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dADld~Aa--~~iv~saf~~~GQ~C~a~srv~V~~si~d-~f~~~L~~~l 369 (428)
+.+++++++. ++++|+|||||+||++|||+|+|+ +.++.++|.|+||.|++++|+||+++.++ .|++.+.+.+
T Consensus 235 ~~aa~~~~~~----~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~ 310 (504)
T d1ez0a_ 235 NLAHERPEPI----PFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLI 310 (504)
T ss_dssp HHHHHSSSCC----CEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred hhhhcccccc----cccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhh
Confidence 9999998843 577899999999999999999874 47899999999999999999999888766 5777777665
Q ss_pred hcCC
Q psy1960 370 FSAS 373 (428)
Q Consensus 370 ~~l~ 373 (428)
+...
T Consensus 311 ~~~~ 314 (504)
T d1ez0a_ 311 RQQS 314 (504)
T ss_dssp HHCC
T ss_pred hhcc
Confidence 5443
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-45 Score=377.95 Aligned_cols=241 Identities=14% Similarity=0.079 Sum_probs=213.0
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccc-------hhhhh
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRM-------SALTF 182 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~-------~~l~~ 182 (428)
++||++|+ ||+.|+.+|.++|. ++|+++ +++ |+++++ ....+...+.||+..+++. +.+++
T Consensus 3 ~~av~~Ar~Af~~w~~~s~~~R~-------~iL~~~-a~~--l~~~~~-~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~ 71 (446)
T d1ad3a_ 3 SDTVKRAREAFNSGKTRSLQFRI-------QQLEAL-QRM--INENLK-SISGALASDLGKNEWTSYYEEVAHVLEELDT 71 (446)
T ss_dssp HHHHHHHHHHHHTTGGGCHHHHH-------HHHHHH-HHH--HHHHHH-HHHHHHHHHHCCCHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 68999999 99999999999999 999999 999 999988 7777888999999766542 22333
Q ss_pred hhc-------c---------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccchHHHHHHHHH
Q psy1960 183 YLE-------V---------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTALLSNYTIYKI 245 (428)
Q Consensus 183 ~~~-------~---------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~apl~a~~l~~l 245 (428)
+.. + .....+..+.|+|||++|+|||||+...++++++||+ ||+||+|||+.+|+++..++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~ 151 (446)
T d1ad3a_ 72 TIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATL 151 (446)
T ss_dssp HHHHHHHHHSCEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccc
Confidence 321 0 1123456678899999999999999999999999998 9999999999999999999999
Q ss_pred HHHcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEecCCCceeEEcCCCC
Q psy1960 246 MIEAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGECGGKNFHFIHASAN 325 (428)
Q Consensus 246 l~eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lElGGkn~~iV~~dAD 325 (428)
+++ ++|+++++++.+.+.+.+ .+. +++++.|.||||+++|+.|.+.++++++ |+++|+|||||+||++|||
T Consensus 152 ~~~-~~~~~~~~~~~~~~~~~~-~~~-~~~~~~v~fTGs~~~G~~i~~~aa~~~~------~~~lElgG~np~iV~~dAD 222 (446)
T d1ad3a_ 152 IPQ-YMDQNLYLVVKGGVPETT-ELL-KERFDHIMYTGSTAVGKIVMAAAAKHLT------PVTLELGGKSPCYVDKDCD 222 (446)
T ss_dssp HHH-HSCTTTEEECCCSHHHHH-HHT-TSCCSEEEEESCHHHHHHHHHHHHTTTC------CEEEECCCCCEEEECSSSC
T ss_pred ccc-cccccccccccccchhhh-hhc-ccccCceEEECcHHHHHHHHHHHHhcCC------cEEEECCCcCcEEEecCCc
Confidence 876 589999999998766543 343 5689999999999999999999999888 8999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhc
Q psy1960 326 VESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFS 371 (428)
Q Consensus 326 ld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~ 371 (428)
+|+|++.+++++|.++||.|++++|+|||++++|+|+++|++.+++
T Consensus 223 l~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~ 268 (446)
T d1ad3a_ 223 LDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKD 268 (446)
T ss_dssp HHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCCCccccCCccccccchhHHHHHhhhhhhhe
Confidence 9999999999999999999999999999999999999999988875
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=5.4e-38 Score=319.95 Aligned_cols=249 Identities=14% Similarity=0.004 Sum_probs=201.0
Q ss_pred hH-HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHHHHHhcCCCCCcccch--------
Q psy1960 109 VL-KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKSTGSVVGQQPFGGGRMS-------- 178 (428)
Q Consensus 109 ~~-~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~~~l~~gkp~~~~~~~-------- 178 (428)
++ ++++++|+ ||+.|+++|..+|. ++|+++ +++ |++|++ ....+.+.+.||+..+++.+
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~-------~iL~k~-a~~--l~~~~~-eia~~~~~e~gk~~~~~~~e~~~~rl~~ 69 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKN-------KAIKKI-AEK--LDERRK-EILEANRIDVEKARERGVKESLVDRLAL 69 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHTTCCHHHHHHHCC
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHH-------HHHHHH-HHH--HHHhHH-HHHHHHHHHHhhHHhccccHHHHHHHhc
Confidence 35 78999999 99999999999999 999999 999 999988 66666777777776543322
Q ss_pred ----------hhhhhhcc------------ccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccc
Q psy1960 179 ----------ALTFYLEV------------LASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 235 (428)
Q Consensus 179 ----------~l~~~~~~------------~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~a 235 (428)
.++++... .......++.|.|++++++|||||+....++++|||+ ||+||+|||+.+
T Consensus 70 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~t 149 (414)
T d1o20a_ 70 NDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDA 149 (414)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCTTCEEEEEECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHHHhhhhccccccccccccccceeecccccccccccccCcHHHhhhccchheecccchhccccccc
Confidence 33444321 1233455666789999999999999999999999998 999999999999
Q ss_pred hHHHHHHHHHHHHc----CCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCcEEEe
Q psy1960 236 LLSNYTIYKIMIEA----GVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPRLIGE 311 (428)
Q Consensus 236 pl~a~~l~~ll~eA----GlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~~~lE 311 (428)
|.++..++++++++ |+|.++++.+.+.+.+.+..+..++ .+.||||+..++.+.+.++++.+ +.++|
T Consensus 150 p~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~v~~~a~~~~~------~~~le 220 (414)
T d1o20a_ 150 LNSNKAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLR---EYLSLVIPRGGYGLISFVRDNAT------VPVLE 220 (414)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCT---TTCSEEEECSCHHHHHHHHHHCS------SCBCC
T ss_pred ccccchhhhHHHhhhhhccccccccccccccchhhhhhccccc---ccCeEEEcccHHHHHHHhhhccc------cceec
Confidence 99999999998877 5555557777766656666655544 45555555566677777787777 66777
Q ss_pred cCCCc-eeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEE
Q psy1960 312 CGGKN-FHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFC 378 (428)
Q Consensus 312 lGGkn-~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~ 378 (428)
+||+| ++||++|||+|.|++.++.++|.+ ||.|++++|++||+++||+|+++|.+..++..+....
T Consensus 221 ~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~ 287 (414)
T d1o20a_ 221 TGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRG 287 (414)
T ss_dssp CCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ccCCCCCeecccccchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHHcCCcccc
Confidence 77655 688999999999999999999976 9999999999999999999999999999998865543
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=1.2e-32 Score=281.91 Aligned_cols=243 Identities=12% Similarity=0.091 Sum_probs=182.9
Q ss_pred HHHHHHHh-ccCccccCChhhhhhhhhhHHHHHHHHHHHHHHHhhccchhHHHH------HHHhcCCC--------CCc-
Q psy1960 111 KSALDIVS-SLCPYEKNSVGLLINTEVLHDDLYFRCLDDLKYAAGNYYINDKST------GSVVGQQP--------FGG- 174 (428)
Q Consensus 111 ~~Av~aA~-A~~~W~~~~~~~R~~~~~~~~~iL~~~~a~l~~L~~~~~~~~~~~------~~l~~gkp--------~~~- 174 (428)
+++++.|+ |++.|+.++.++|. ++|+++ +++ |+++++ ....+ ...+.|.+ +.+
T Consensus 6 e~~~~~Ak~A~~~l~~~s~~~R~-------~iL~~~-a~~--L~~~~~-eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~ 74 (436)
T d1vlua_ 6 QQIAKNARKAGNILKTISNEGRS-------DILYKI-HDA--LKANAH-AIEEANKIDLAVAKETGLADSLLKRLDLFKG 74 (436)
T ss_dssp HHHHHHHHHHHHHHTTSCHHHHH-------HHHHHH-HHH--HHHTHH-HHHHHHHHHHHHHHHSSCCHHHHHHHCTTST
T ss_pred HHHHHHHHHHHHHHHhCCHHHHH-------HHHHHH-HHH--HHHCHH-HHHHHHHHHHHHHHHcCCcHHHHHHHhcCch
Confidence 77889999 99999999999999 999999 999 998877 32211 11222322 101
Q ss_pred ccc----hhhhhhhc--------------cccccceeeecccceEEEECCCchhhhhhHhhhhhhcC-CCEEEEeCCccc
Q psy1960 175 GRM----SALTFYLE--------------VLASNLGRGEGLDGFVAAVSPFNFTAIGGNLAYTPALM-GSSVLWKPSDTA 235 (428)
Q Consensus 175 ~~~----~~l~~~~~--------------~~~~~~~~~~~p~GVV~~I~P~NfP~~~~~~~iapALa-GN~VVlKPs~~a 235 (428)
.+. +.++..+. +.+......+.|+||+++| |||+|. ....+.+++|. ||+||+||++.+
T Consensus 75 ~ri~~~~~~l~~i~~~~dpvg~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P~-vt~~~~~lalksGNavIlk~~~~a 152 (436)
T d1vlua_ 75 DKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVI-FESRPE-VIANITALSIKSGNAAILKGGKES 152 (436)
T ss_dssp THHHHHHHHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCTH-HHHHHHHHHHHHTCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHhccccceeEeeeeeccccceEEEeeeeeeeeecc-ccccch-hhhhhhhcccccCCcceecCCccc
Confidence 111 11221111 1233455677899999998 666673 34456677888 999999999999
Q ss_pred hHHHHHHHHHHH--------HcCCCCccEEEeeCCChhhhhhhhcCCCeeEEEeeCChhhHHHHHHHHhcccCcccCCCc
Q psy1960 236 LLSNYTIYKIMI--------EAGVPPGVVNFVPADGPVFGDTITASPYLAGINFTGSVPTFNRLWLQVGKNINVYKNFPR 307 (428)
Q Consensus 236 pl~a~~l~~ll~--------eAGlP~gvv~vv~g~g~~~g~~L~~~~~v~~I~fTGS~~~g~~i~~~~a~~~~~~~~~~~ 307 (428)
+.++..+.++++ ++|+|+|+++++++. .++++.|..|++|+.|+||||...++.+.+.+. .|
T Consensus 153 ~~s~~~l~~~~~~al~~a~~~aGlP~~~i~~v~~~-~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---------~p 222 (436)
T d1vlua_ 153 VNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETR-QDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---------IP 222 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTTSEEECCCC---CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---------SC
T ss_pred ccCHHHHHHHHHHhhhhhccccCCCCceEEEecch-hHHHHHhccCCCCceEEEecCCceeeeeecccc---------ce
Confidence 999998887764 669999999999874 578999999999999999999998888755532 17
Q ss_pred EEEecCCCceeEEcCCCCHHHHHHHHHHHHhhcCCCccccCceEEEeCCchHHHHHHHHHHHhcCCcceEE
Q psy1960 308 LIGECGGKNFHFIHASANVESVVNGTIRSAFEYCGQKCSACSRMYVPESLFCFCSCFLLLFLFSASVPVFC 378 (428)
Q Consensus 308 ~~lElGGkn~~iV~~dADld~Aa~~iv~saf~~~GQ~C~a~srv~V~~si~d~f~~~L~~~l~~l~v~~~~ 378 (428)
+++++||++++||++|||+|+|++.++.++|.+.|| |++.++++||+++++.|.. +...+.+-.+.+++
T Consensus 223 vi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~-~~~~~~~~gv~l~~ 291 (436)
T d1vlua_ 223 VLGHADGICSIYLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEV-LENLTLEGGVTIHA 291 (436)
T ss_dssp BTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHH-HHHHHHHHCCCBEE
T ss_pred EEEecCCccceeecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhh-hHHHHHhCCcEEEe
Confidence 899999999999999999999999999999999997 8899999999999988754 44555555555554
|