Psyllid ID: psy2008

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MSENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISERVDQ
cHHcHHHHccccEEEEEcccccccHHHHcccccccccEEEccccccEEEEEccHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHHcccccccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccHHHHHHHHHHHcccccccccccccccc
cccHHHHHHcccEEEEEEccccccHHHHHccccccccEEEccccccEEEEEcccHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccHHEEHHHHHHHHHHHHHccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEccccHHHcccHHHHHHHHHHHcccccccccccHHccc
msenqyskaldkeasgysrpkthnisdafnqkftstptkvngidnlfameidpnirqtelsqddilsdeanggsgnmfgggMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVvvfdtaptghtlrllsfpQNIERGLSKILALRNQIGpfltqigtlfgladftsdnIAGKFEELLGNVRemnaqfrdpakstFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEedfhvtklplqseeirgVAKVEAFSRMlvtpfeptnkiservdq
msenqyskaldkeasgysrpkthnisdafnqkftstptkVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTklplqseeirGVAKVEAFSrmlvtpfeptnkiservdq
MSENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEAnggsgnmfgggmINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISERVDQ
***************************************VNGIDNLFAMEID***********************NMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVT**************
MSENQY*KALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGS**MFG**MINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQ*******************DNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTN********
******************RPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISERVDQ
******SKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPT*********
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MSENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGMINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISERVDQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query311 2.2.26 [Sep-21-2011]
Q5TRE7337 ATPase ASNA1 homolog OS=A yes N/A 0.868 0.801 0.630 9e-99
B0WEV5348 ATPase ASNA1 homolog OS=C N/A N/A 0.871 0.778 0.610 5e-97
Q16MG9341 ATPase ASNA1 homolog OS=A N/A N/A 0.890 0.812 0.604 6e-97
B3MHB7336 ATPase ASNA1 homolog OS=D N/A N/A 0.887 0.821 0.582 1e-94
Q28YJ2336 ATPase ASNA1 homolog OS=D yes N/A 0.887 0.821 0.578 4e-94
B4P1R6336 ATPase ASNA1 homolog OS=D N/A N/A 0.890 0.824 0.569 1e-93
B4H8J5336 ATPase ASNA1 homolog OS=D N/A N/A 0.887 0.821 0.575 2e-93
B3N9X2336 ATPase ASNA1 homolog OS=D N/A N/A 0.890 0.824 0.569 2e-93
B4LN33336 ATPase ASNA1 homolog OS=D N/A N/A 0.868 0.803 0.580 7e-93
B4QEC4336 ATPase ASNA1 homolog OS=D N/A N/A 0.890 0.824 0.559 2e-92
>sp|Q5TRE7|ASNA_ANOGA ATPase ASNA1 homolog OS=Anopheles gambiae GN=AGAP005782 PE=3 SV=3 Back     alignment and function desciption
 Score =  360 bits (923), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 176/279 (63%), Positives = 213/279 (76%), Gaps = 9/279 (3%)

Query: 23  HNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM 82
           HNISDAF+QKFT  PTKVNG DNLFAMEIDPN+  +EL  D+   DEA+  +    G GM
Sbjct: 61  HNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNVGISELP-DEYFEDEASPLN---VGKGM 116

Query: 83  INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGL 142
           + +V+  L    PGIDEAMSYAEV+KLVK MNFSVVVFDTAPTGHTLRLLSFPQ +E+GL
Sbjct: 117 LQEVIGTL----PGIDEAMSYAEVMKLVKAMNFSVVVFDTAPTGHTLRLLSFPQVVEKGL 172

Query: 143 SKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCV 202
            K+L L+ ++ P +TQ+G+LFG+ DF  D IA K EE+L  ++++N QF +P ++TFVCV
Sbjct: 173 GKLLRLKMKLAPIITQMGSLFGVQDFNGDTIANKLEEMLSIIQQVNEQFHNPQQTTFVCV 232

Query: 203 CIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQI 262
           CIAEFLSLYETERLVQEL K GIDT NIIVNQL+F       C++CS R + Q KYLDQI
Sbjct: 233 CIAEFLSLYETERLVQELTKCGIDTHNIIVNQLMFQKKGQQPCSMCSARCKVQEKYLDQI 292

Query: 263 LDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEP 301
            DLY EDFHV +LPL  EE+RGV KV+ FSR L+ P+ P
Sbjct: 293 ADLY-EDFHVVRLPLLDEEVRGVEKVKKFSRNLLVPYSP 330
ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting.
Anopheles gambiae (taxid: 7165)
EC: 3EC: .EC: 6EC: .EC: -EC: .EC: -
>sp|B0WEV5|ASNA_CULQU ATPase ASNA1 homolog OS=Culex quinquefasciatus GN=CPIJ005690 PE=3 SV=1 Back     alignment and function description
>sp|Q16MG9|ASNA_AEDAE ATPase ASNA1 homolog OS=Aedes aegypti GN=AAEL011136 PE=3 SV=1 Back     alignment and function description
>sp|B3MHB7|ASNA_DROAN ATPase ASNA1 homolog OS=Drosophila ananassae GN=GF11712 PE=3 SV=1 Back     alignment and function description
>sp|Q28YJ2|ASNA_DROPS ATPase ASNA1 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA14038 PE=3 SV=1 Back     alignment and function description
>sp|B4P1R6|ASNA_DROYA ATPase ASNA1 homolog OS=Drosophila yakuba GN=GE23838 PE=3 SV=1 Back     alignment and function description
>sp|B4H8J5|ASNA_DROPE ATPase ASNA1 homolog OS=Drosophila persimilis GN=GL20106 PE=3 SV=1 Back     alignment and function description
>sp|B3N9X2|ASNA_DROER ATPase ASNA1 homolog OS=Drosophila erecta GN=GG10733 PE=3 SV=1 Back     alignment and function description
>sp|B4LN33|ASNA_DROVI ATPase ASNA1 homolog OS=Drosophila virilis GN=GJ21093 PE=3 SV=1 Back     alignment and function description
>sp|B4QEC4|ASNA_DROSI ATPase ASNA1 homolog OS=Drosophila simulans GN=GD10240 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
158294768337 AGAP005782-PA [Anopheles gambiae str. PE 0.868 0.801 0.630 6e-97
332018453338 ATPase ASNA1-like protein [Acromyrmex ec 0.881 0.810 0.602 2e-96
170038806348 arsenical pump-driving ATPase [Culex qui 0.871 0.778 0.610 3e-95
157128460341 arsenical pump-driving atpase [Aedes aeg 0.890 0.812 0.604 4e-95
340717228339 PREDICTED: ATPase ASNA1 homolog [Bombus 0.881 0.808 0.591 8e-95
380018758339 PREDICTED: LOW QUALITY PROTEIN: ATPase A 0.881 0.808 0.594 1e-94
156537421344 PREDICTED: ATPase ASNA1 homolog isoform 0.932 0.843 0.585 4e-94
357622384335 putative Arsenical pump-driving ATPase [ 0.858 0.797 0.6 6e-94
307205172338 Arsenical pump-driving ATPase [Harpegnat 0.874 0.804 0.598 7e-94
350407246337 PREDICTED: ATPase ASNA1 homolog [Bombus 0.874 0.807 0.591 8e-94
>gi|158294768|ref|XP_556439.3| AGAP005782-PA [Anopheles gambiae str. PEST] gi|263409801|sp|Q5TRE7.3|ASNA_ANOGA RecName: Full=ATPase ASNA1 homolog; AltName: Full=Arsenical pump-driving ATPase homolog; AltName: Full=Arsenite-stimulated ATPase gi|157015719|gb|EAL39917.3| AGAP005782-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
 Score =  360 bits (923), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 176/279 (63%), Positives = 213/279 (76%), Gaps = 9/279 (3%)

Query: 23  HNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM 82
           HNISDAF+QKFT  PTKVNG DNLFAMEIDPN+  +EL  D+   DEA+  +    G GM
Sbjct: 61  HNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNVGISELP-DEYFEDEASPLN---VGKGM 116

Query: 83  INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGL 142
           + +V+  L    PGIDEAMSYAEV+KLVK MNFSVVVFDTAPTGHTLRLLSFPQ +E+GL
Sbjct: 117 LQEVIGTL----PGIDEAMSYAEVMKLVKAMNFSVVVFDTAPTGHTLRLLSFPQVVEKGL 172

Query: 143 SKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCV 202
            K+L L+ ++ P +TQ+G+LFG+ DF  D IA K EE+L  ++++N QF +P ++TFVCV
Sbjct: 173 GKLLRLKMKLAPIITQMGSLFGVQDFNGDTIANKLEEMLSIIQQVNEQFHNPQQTTFVCV 232

Query: 203 CIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQI 262
           CIAEFLSLYETERLVQEL K GIDT NIIVNQL+F       C++CS R + Q KYLDQI
Sbjct: 233 CIAEFLSLYETERLVQELTKCGIDTHNIIVNQLMFQKKGQQPCSMCSARCKVQEKYLDQI 292

Query: 263 LDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEP 301
            DLY EDFHV +LPL  EE+RGV KV+ FSR L+ P+ P
Sbjct: 293 ADLY-EDFHVVRLPLLDEEVRGVEKVKKFSRNLLVPYSP 330

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|332018453|gb|EGI59043.1| ATPase ASNA1-like protein [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|170038806|ref|XP_001847239.1| arsenical pump-driving ATPase [Culex quinquefasciatus] gi|263406173|sp|B0WEV5.1|ASNA_CULQU RecName: Full=ATPase ASNA1 homolog; AltName: Full=Arsenical pump-driving ATPase homolog; AltName: Full=Arsenite-stimulated ATPase gi|167882485|gb|EDS45868.1| arsenical pump-driving ATPase [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|157128460|ref|XP_001661438.1| arsenical pump-driving atpase [Aedes aegypti] gi|157132015|ref|XP_001662407.1| arsenical pump-driving atpase [Aedes aegypti] gi|122127164|sp|Q16MG9.1|ASNA_AEDAE RecName: Full=ATPase ASNA1 homolog; AltName: Full=Arsenical pump-driving ATPase homolog; AltName: Full=Arsenite-stimulated ATPase gi|108871294|gb|EAT35519.1| AAEL012316-PA [Aedes aegypti] gi|108872580|gb|EAT36805.1| AAEL011136-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|340717228|ref|XP_003397088.1| PREDICTED: ATPase ASNA1 homolog [Bombus terrestris] Back     alignment and taxonomy information
>gi|380018758|ref|XP_003693290.1| PREDICTED: LOW QUALITY PROTEIN: ATPase ASNA1 homolog [Apis florea] Back     alignment and taxonomy information
>gi|156537421|ref|XP_001606891.1| PREDICTED: ATPase ASNA1 homolog isoform 1 [Nasonia vitripennis] gi|345479455|ref|XP_003423951.1| PREDICTED: ATPase ASNA1 homolog isoform 2 [Nasonia vitripennis] Back     alignment and taxonomy information
>gi|357622384|gb|EHJ73886.1| putative Arsenical pump-driving ATPase [Danaus plexippus] Back     alignment and taxonomy information
>gi|307205172|gb|EFN83600.1| Arsenical pump-driving ATPase [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|350407246|ref|XP_003488032.1| PREDICTED: ATPase ASNA1 homolog [Bombus impatiens] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
FB|FBgn0033191336 CG1598 [Drosophila melanogaste 0.903 0.836 0.551 1.7e-82
UNIPROTKB|A5PJI5348 ASNA1 "ATPase ASNA1" [Bos taur 0.877 0.784 0.556 2.2e-80
UNIPROTKB|O43681348 ASNA1 "ATPase ASNA1" [Homo sap 0.877 0.784 0.556 2.2e-80
UNIPROTKB|F2Z5J4348 ASNA1 "Uncharacterized protein 0.877 0.784 0.556 2.2e-80
MGI|MGI:1928379348 Asna1 "arsA arsenite transport 0.877 0.784 0.556 2.2e-80
UNIPROTKB|G3V9T7348 Asna1 "ArsA arsenite transport 0.877 0.784 0.556 2.2e-80
ZFIN|ZDB-GENE-040625-120341 asna1 "arsA arsenite transport 0.887 0.809 0.550 2.2e-80
UNIPROTKB|J9P8B5342 ASNA1 "Uncharacterized protein 0.858 0.780 0.524 2.2e-73
WB|WBGene00014025342 asna-1 [Caenorhabditis elegans 0.900 0.818 0.503 2.7e-68
UNIPROTKB|P30632342 asna-1 "ATPase asna-1" [Caenor 0.900 0.818 0.503 2.7e-68
FB|FBgn0033191 CG1598 [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
 Identities = 160/290 (55%), Positives = 208/290 (71%)

Query:    18 SRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEAXXXXXXX 77
             S    HNISDAF+QKFT  PTKVNG DNLFAMEIDPN    EL ++    +         
Sbjct:    56 STDPAHNISDAFDQKFTKVPTKVNGFDNLFAMEIDPNAGLNELPEEYFDGENEALRVS-- 113

Query:    78 XXXXXINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQN 137
                     V+ ++IN  PGIDEAMSYAEV+KLVKGMNFSVVVFDTAPTGHTLRL++FPQ 
Sbjct:   114 ------KGVMQEMINALPGIDEAMSYAEVMKLVKGMNFSVVVFDTAPTGHTLRLIAFPQV 167

Query:   138 IERGLSKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKS 197
             +E+GL K+L L+ ++ P L+Q  ++ G+AD  +D ++ K +++L  + ++N QF++P ++
Sbjct:   168 VEKGLGKLLRLKMKVAPLLSQFVSMLGMADVNADTLSQKLDDMLRVITQVNEQFKNPDQT 227

Query:   198 TFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAK 257
             TFVCVCIAEF SLYETERLVQEL K GID  NIIVNQL+F   S D+C++C++R++ Q K
Sbjct:   228 TFVCVCIAEFFSLYETERLVQELTKCGIDVHNIIVNQLLFLQNSHDSCSMCASRFKIQEK 287

Query:   258 YLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISE 307
             YLDQI DLYE DFHVTKLPL  +E+RG   + +FS  L+ P+ P  +  E
Sbjct:   288 YLDQIADLYE-DFHVTKLPLLEKEVRGPESIRSFSENLMKPYNPKGEPKE 336
GO:0015446 "arsenite-transmembrane transporting ATPase activity" evidence=ISS
GO:0071722 "detoxification of arsenic-containing substance" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
UNIPROTKB|A5PJI5 ASNA1 "ATPase ASNA1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|O43681 ASNA1 "ATPase ASNA1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F2Z5J4 ASNA1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1928379 Asna1 "arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|G3V9T7 Asna1 "ArsA arsenite transporter, ATP-binding, homolog 1 (Bacterial)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040625-120 asna1 "arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9P8B5 ASNA1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
WB|WBGene00014025 asna-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
UNIPROTKB|P30632 asna-1 "ATPase asna-1" [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B4P1R6ASNA_DROYA3, ., 6, ., -, ., -0.56990.89060.8244N/AN/A
B4J4F6ASNA_DROGR3, ., 6, ., -, ., -0.57340.86810.8035N/AN/A
A7RQM5ASNA_NEMVE3, ., 6, ., -, ., -0.58060.86170.8023N/AN/A
P0CM24GET3_CRYNJ3, ., 6, ., -, ., -0.52680.84880.8123yesN/A
P0CM25GET3_CRYNB3, ., 6, ., -, ., -0.52680.84880.8123N/AN/A
Q16MG9ASNA_AEDAE3, ., 6, ., -, ., -0.60410.89060.8123N/AN/A
O43681ASNA_HUMAN3, ., 6, ., -, ., -0.56730.87130.7787yesN/A
Q8T662ASNA_DICDI3, ., 6, ., -, ., -0.46990.84880.8024yesN/A
Q2UKT0GET3_ASPOR3, ., 6, ., -, ., -0.49290.87450.8023yesN/A
P30632ASNA_CAEEL3, ., 6, ., -, ., -0.52810.87450.7953yesN/A
Q5B971GET3_EMENI3, ., 6, ., -, ., -0.49290.88100.8058yesN/A
A5PJI5ASNA_BOVIN3, ., 6, ., -, ., -0.56730.87130.7787yesN/A
B4QEC4ASNA_DROSI3, ., 6, ., -, ., -0.55940.89060.8244N/AN/A
A8N0V8GET3_COPC73, ., 6, ., -, ., -0.50890.85200.8128N/AN/A
O54984ASNA_MOUSE3, ., 6, ., -, ., -0.56730.87130.7787yesN/A
Q4WY07GET3_ASPFU3, ., 6, ., -, ., -0.50350.87450.8yesN/A
Q0IIZ2ASNA_XENTR3, ., 6, ., -, ., -0.56380.87130.7923yesN/A
Q5TRE7ASNA_ANOGA3, ., 6, ., -, ., -0.63080.86810.8011yesN/A
B0CPJ0GET3_LACBS3, ., 6, ., -, ., -0.50170.85530.8060N/AN/A
A8WNH9ASNA_CAEBR3, ., 6, ., -, ., -0.52410.89710.8086N/AN/A
Q7JWD3ASNA_DROME3, ., 6, ., -, ., -0.55940.89060.8244yesN/A
Q6IQE5ASNA_DANRE3, ., 6, ., -, ., -0.56530.87450.7976yesN/A
B3MHB7ASNA_DROAN3, ., 6, ., -, ., -0.58240.88740.8214N/AN/A
B4KTG7ASNA_DROMO3, ., 6, ., -, ., -0.57140.87130.8162N/AN/A
A5AAA1GET3_ASPNC3, ., 6, ., -, ., -0.49640.87450.7976yesN/A
B2VVF0GET3_PYRTR3, ., 6, ., -, ., -0.51060.87780.8053N/AN/A
Q28YJ2ASNA_DROPS3, ., 6, ., -, ., -0.57890.88740.8214yesN/A
B3N9X2ASNA_DROER3, ., 6, ., -, ., -0.56990.89060.8244N/AN/A
Q6C3M9GET3_YARLI3, ., 6, ., -, ., -0.50170.84880.8073yesN/A
Q1E167GET3_COCIM3, ., 6, ., -, ., -0.50340.87450.8023N/AN/A
B4LN33ASNA_DROVI3, ., 6, ., -, ., -0.58060.86810.8035N/AN/A
B4HR35ASNA_DROSE3, ., 6, ., -, ., -0.55940.88740.8238N/AN/A
B6H443GET3_PENCW3, ., 6, ., -, ., -0.50880.87130.7970yesN/A
B4H8J5ASNA_DROPE3, ., 6, ., -, ., -0.57540.88740.8214N/AN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
pfam02374304 pfam02374, ArsA_ATPase, Anion-transporting ATPase 2e-93
TIGR00345284 TIGR00345, GET3_arsA_TRC40, transport-energizing A 5e-69
COG0003322 COG0003, ArsA, Predicted ATPase involved in chromo 1e-47
cd02035217 cd02035, ArsA, ArsA ATPase functionas as an efflux 9e-46
TIGR04291 566 TIGR04291, arsen_driv_ArsA, arsenical pump-driving 2e-15
TIGR04291566 TIGR04291, arsen_driv_ArsA, arsenical pump-driving 4e-08
>gnl|CDD|217004 pfam02374, ArsA_ATPase, Anion-transporting ATPase Back     alignment and domain information 
 Score =  278 bits (714), Expect = 2e-93
 Identities = 111/274 (40%), Positives = 152/274 (55%), Gaps = 11/274 (4%)

Query: 23  HNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM 82
           H++SD+FNQKF   PTK+ G++NL AMEIDP +   E   +  + D  N       G  M
Sbjct: 41  HSLSDSFNQKFGHEPTKIKGVENLSAMEIDPQMELEEYRGE--VQDPINAV----LGLDM 94

Query: 83  INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGL 142
           +  +L + ++  PGIDE  S+ E  K +    + VV+FDTAPTGHTLRLLS P  +   L
Sbjct: 95  LEGILAEELSSLPGIDEIASFDEFKKYMDEGEYDVVIFDTAPTGHTLRLLSLPTVLSWYL 154

Query: 143 SKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCV 202
            KI+ L+NQIGP       + G+            EE    + +      DP +++F  V
Sbjct: 155 EKIVKLKNQIGPLAKPFKGM-GMGGSCLPEALESLEETKEQIEKAREILSDPERTSFRLV 213

Query: 203 CIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQI 262
           CI E +SLYETER +QELAK GID   +IVNQ++      + C  C  R   Q KYL +I
Sbjct: 214 CIPEKMSLYETERAIQELAKYGIDVDAVIVNQVL---PETEQCPFCEARKEIQQKYLKEI 270

Query: 263 LDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLV 296
            +L+  D  V KLPL  EE+ G+  +E FS+ L 
Sbjct: 271 EELF-SDLPVAKLPLLPEEVVGLEALEKFSQTLY 303

This Pfam family represents a conserved domain, which is sometimes repeated, in an anion-transporting ATPase. The ATPase is involved in the removal of arsenate, antimonite, and arsenate from the cell. Length = 304
>gnl|CDD|232932 TIGR00345, GET3_arsA_TRC40, transport-energizing ATPase, TRC40/GET3/ArsA family Back     alignment and domain information
>gnl|CDD|223082 COG0003, ArsA, Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|238992 cd02035, ArsA, ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell Back     alignment and domain information
>gnl|CDD|213904 TIGR04291, arsen_driv_ArsA, arsenical pump-driving ATPase Back     alignment and domain information
>gnl|CDD|213904 TIGR04291, arsen_driv_ArsA, arsenical pump-driving ATPase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 311
PF02374305 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_ 100.0
KOG2825|consensus323 100.0
TIGR00345284 arsA arsenite-activated ATPase (arsA). The N-termi 100.0
COG0003322 ArsA Predicted ATPase involved in chromosome parti 100.0
cd00550254 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). 100.0
cd02035217 ArsA ArsA ATPase functionas as an efflux pump loca 99.92
cd02037169 MRP-like MRP (Multiple Resistance and pH adaptatio 99.22
PRK11670369 antiporter inner membrane protein; Provisional 98.7
CHL00175281 minD septum-site determining protein; Validated 98.62
COG0489265 Mrp ATPases involved in chromosome partitioning [C 98.53
PRK13869405 plasmid-partitioning protein RepA; Provisional 98.53
cd02117212 NifH_like This family contains the NifH (iron prot 98.44
cd02036179 MinD Bacterial cell division requires the formatio 98.4
TIGR03029274 EpsG chain length determinant protein tyrosine kin 98.4
TIGR03371246 cellulose_yhjQ cellulose synthase operon protein Y 98.39
TIGR01007204 eps_fam capsular exopolysaccharide family. This mo 98.37
TIGR01969251 minD_arch cell division ATPase MinD, archaeal. Thi 98.32
PF1060981 ParA: ParA/MinD ATPase like; InterPro: IPR019591 T 98.28
TIGR01005754 eps_transp_fam exopolysaccharide transport protein 98.27
PRK13232273 nifH nitrogenase reductase; Reviewed 98.24
PRK09841726 cryptic autophosphorylating protein tyrosine kinas 98.24
TIGR01968261 minD_bact septum site-determining protein MinD. Th 98.24
COG0455262 flhG Antiactivator of flagellar biosynthesis FleN, 98.22
PRK13235274 nifH nitrogenase reductase; Reviewed 98.22
PRK11519719 tyrosine kinase; Provisional 98.22
TIGR03453387 partition_RepA plasmid partitioning protein RepA. 98.2
PHA02519387 plasmid partition protein SopA; Reviewed 98.18
PRK13705388 plasmid-partitioning protein SopA; Provisional 98.18
PRK13233275 nifH nitrogenase reductase; Reviewed 98.16
PF01656195 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domai 98.14
CHL00072290 chlL photochlorophyllide reductase subunit L 98.13
cd02040270 NifH NifH gene encodes component II (iron protein) 98.11
KOG3022|consensus300 98.09
PRK10818270 cell division inhibitor MinD; Provisional 98.08
TIGR01281268 DPOR_bchL light-independent protochlorophyllide re 98.07
PRK13230279 nitrogenase reductase-like protein; Reviewed 98.07
PHA02518211 ParA-like protein; Provisional 98.07
cd02032267 Bchl_like This family of proteins contains bchL an 98.07
TIGR03018207 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus t 98.06
cd02033329 BchX Chlorophyllide reductase converts chlorophyll 98.05
PRK13185270 chlL protochlorophyllide reductase iron-sulfur ATP 98.0
TIGR01287275 nifH nitrogenase iron protein. This model describe 97.98
COG1192259 Soj ATPases involved in chromosome partitioning [C 97.96
PRK13234295 nifH nitrogenase reductase; Reviewed 97.95
PRK13849231 putative crown gall tumor protein VirC1; Provision 97.95
PRK13236296 nitrogenase reductase; Reviewed 97.92
COG3640255 CooC CO dehydrogenase maturation factor [Cell divi 97.77
TIGR02016296 BchX chlorophyllide reductase iron protein subunit 97.72
TIGR03815322 CpaE_hom_Actino helicase/secretion neighborhood Cp 97.66
cd03111106 CpaE_like This protein family consists of proteins 97.63
PRK10037250 cell division protein; Provisional 97.57
cd03110179 Fer4_NifH_child This protein family's function is 97.39
PRK00090222 bioD dithiobiotin synthetase; Reviewed 97.29
PRK13231264 nitrogenase reductase-like protein; Reviewed 97.27
cd02038139 FleN-like FleN is a member of the Fer4_NifH superf 97.23
cd02042104 ParA ParA and ParB of Caulobacter crescentus belon 97.03
PF06564243 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ p 96.71
TIGR00347166 bioD dethiobiotin synthase. Dethiobiotin synthase 96.49
TIGR00064272 ftsY signal recognition particle-docking protein F 96.41
COG2894272 MinD Septum formation inhibitor-activating ATPase 96.27
PRK10867433 signal recognition particle protein; Provisional 95.93
PRK10416318 signal recognition particle-docking protein FtsY; 95.48
COG1149284 MinD superfamily P-loop ATPase containing an inser 95.35
PF07015231 VirC1: VirC1 protein; InterPro: IPR009744 This fam 94.34
PF13614157 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ 93.16
PRK13886241 conjugal transfer protein TraL; Provisional 93.05
TIGR01425429 SRP54_euk signal recognition particle protein SRP5 92.92
cd03109134 DTBS Dethiobiotin synthetase (DTBS) is the penulti 92.77
PF13500199 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R 92.24
cd03115173 SRP The signal recognition particle (SRP) mediates 92.15
cd03114148 ArgK-like The function of this protein family is u 92.04
PRK05632 684 phosphate acetyltransferase; Reviewed 90.63
cd02034116 CooC The accessory protein CooC, which contains a 90.39
PF09140261 MipZ: ATPase MipZ; InterPro: IPR015223 Cell divisi 90.21
PRK12726407 flagellar biosynthesis regulator FlhF; Provisional 89.64
TIGR00959428 ffh signal recognition particle protein. This mode 88.1
COG4963366 CpaE Flp pilus assembly protein, ATPase CpaE [Intr 87.49
cd03113255 CTGs CTP synthetase (CTPs) is a two-domain protein 86.38
TIGR00750300 lao LAO/AO transport system ATPase. Mutations have 85.29
TIGR00313 475 cobQ cobyric acid synthase CobQ. 84.05
PRK12374231 putative dithiobiotin synthetase; Provisional 83.36
PF00142273 Fer4_NifH: 4Fe-4S iron sulfur cluster binding prot 82.84
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B Back     alignment and domain information 
Probab=100.00  E-value=1.1e-65  Score=481.40  Aligned_cols=286  Identities=32%  Similarity=0.528  Sum_probs=244.9

Q ss_pred             ChhhhHHhCCCcEEEEecCCCCChhhhhccCCCCCCeeeCCCCCeEEEEecchHHHHhhcccchhhhhhhCCccccccCC
Q psy2008           2 SENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGG   81 (311)
Q Consensus         2 ~~~~~aa~~G~rtLlvS~DPa~sL~d~l~~~l~~~p~~v~~~~nL~a~eid~~~~~~~~~~~~~l~~~~~~~~~~~l~~~   81 (311)
                      +.|.++|++|+||||+|+||||||+|+||++++++|++|.+.+||+++|||+..++++||.      ++.+.....+...
T Consensus        20 A~A~~~A~~G~rtLlvS~Dpa~~L~d~l~~~~~~~~~~v~~~~~L~a~eid~~~~~~~~~~------~~~~~~~~~~~~~   93 (305)
T PF02374_consen   20 ALALALARRGKRTLLVSTDPAHSLSDVLGQKLGGEPTKVEGVPNLSAMEIDPEAELEEYWE------EVQKDLSSLLPLI   93 (305)
T ss_dssp             HHHHHHHHTTS-EEEEESSTTTHHHHHHTS--BSS-EEETTCSSEEEEE--HHHHHHHHHH------HHHHGCSTCHHCH
T ss_pred             HHHHHHhhCCCCeeEeecCCCccHHHHhCCcCCCCCeEecCCCCceeeecCHHHHHHHHHH------HHHhhhccchhhh
Confidence            3678889999999999999999999999999999999999999999999999999999993      3333222233212


Q ss_pred             CchhHHHHHhhcCCCHHHHHHHHHHHHHHhcCCCcEEEEcCCCchHHHHhhhhHHHHHHHHHHHHHHHhhhchhhhhhhh
Q psy2008          82 MINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGT  161 (311)
Q Consensus        82 ~~~~~~~~~~~~~PG~~E~~aL~~l~~~~~~~~yD~IV~Dt~Ptg~tLrlL~lP~~l~~~l~~l~~l~~k~~~~~~~l~~  161 (311)
                      ..++++..++..+||++|+++|.+|.+++++++||+|||||||||||||||++|+.+.||+++++++++++.++.+.+.+
T Consensus        94 ~~~~~~~~~~~~~PG~~E~~~l~~l~~~~~~~~~D~IVvDt~ptg~tLrlL~lP~~l~~~l~~l~~~~~~~~~~~~~~~~  173 (305)
T PF02374_consen   94 GLERILDEELSSLPGLDELAALLRLADLLESGEYDLIVVDTPPTGHTLRLLSLPERLRWWLDRLLKLRRKIRSLARPLSG  173 (305)
T ss_dssp             HHHHHHHHHTTSSTTHHHHHHHHHHHHHHHHCSTSEEEEESSSSHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCH
T ss_pred             hhHHHHHHHHhcCCcHHHHHHHHHHHHHHHhCCCCEEEECCCCcHHHHHHHhHHHHHHHHHHHHHHHHHhhcchhhhhhc
Confidence            33567888899899999999999999999999999999999999999999999999999999999999998887776655


Q ss_pred             hcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEecCCcccHHHHHHHHHHHHhcCCCcceEEEcCCcCcCcc
Q psy2008         162 LFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSAS  241 (311)
Q Consensus       162 ~~g~~~~~~d~~~~~l~~~~~~~~~~~~~L~dp~~T~~~lVt~pe~l~v~Et~rl~~~L~~~gi~v~~vvvNrv~~~~~~  241 (311)
                       .+.+....+++++.++++++++++++++|+||++|+|++|++||++++.||+|++++|+++||+++++||||++|+.. 
T Consensus       174 -~~~~~~~~~~~~~~l~~~~~~~~~~~~~L~dp~~T~~~lV~~pE~l~i~Et~r~~~~L~~~gi~v~~vVvNrvlp~~~-  251 (305)
T PF02374_consen  174 -LGLGAVPLDEILEELEEMRERLERLRELLRDPERTSFRLVTNPEPLAIAETERLLTELKLYGIPVDAVVVNRVLPEEE-  251 (305)
T ss_dssp             -SHCCHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTEEEEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEEEEEE-TTCS-
T ss_pred             -ccccccchHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccCeEEEEccccccc-
Confidence             222234446799999999999999999999999999999999999999999999999999999999999999999875 


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHhhhcCCCcEEEecCCCCCCCCHHHHHHHHHHhcC
Q psy2008         242 VDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVT  297 (311)
Q Consensus       242 ~~~~~~~~~r~~~q~~~l~~i~~~f~~~~pv~~vp~~~~e~~g~~~L~~l~~~l~~  297 (311)
                       .+|+||++|.+.|+++++++++.|+ ++||+.+|+++.||.|+++|++|++.|+.
T Consensus       252 -~~c~~~~~r~~~Q~~~l~~i~~~f~-~~~v~~vp~~~~ev~G~~~L~~~~~~L~~  305 (305)
T PF02374_consen  252 -DDCPFCAARRKEQQKYLAEIEESFP-DLPVVKVPLLPEEVRGLDALEALADHLYK  305 (305)
T ss_dssp             -TTSHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEE--SS-S-SHHHHHHHHHHHH-
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHHhc-CCCEEEecCCCCCCCCHHHHHHHHHHhcC
Confidence             3589999999999999999999999 99999999999999999999999999874

...
>KOG2825|consensus Back     alignment and domain information
>TIGR00345 arsA arsenite-activated ATPase (arsA) Back     alignment and domain information
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning] Back     alignment and domain information
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA) Back     alignment and domain information
>cd02035 ArsA ArsA ATPase functionas as an efflux pump located on the inner membrane of the cell Back     alignment and domain information
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily Back     alignment and domain information
>PRK11670 antiporter inner membrane protein; Provisional Back     alignment and domain information
>CHL00175 minD septum-site determining protein; Validated Back     alignment and domain information
>COG0489 Mrp ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK13869 plasmid-partitioning protein RepA; Provisional Back     alignment and domain information
>cd02117 NifH_like This family contains the NifH (iron protein) of nitrogenase, L subunit (BchL/ChlL) of the protochlorophyllide reductase and the BchX subunit of the Chlorophyllide reductase Back     alignment and domain information
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell Back     alignment and domain information
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG Back     alignment and domain information
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ Back     alignment and domain information
>TIGR01007 eps_fam capsular exopolysaccharide family Back     alignment and domain information
>TIGR01969 minD_arch cell division ATPase MinD, archaeal Back     alignment and domain information
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning [] Back     alignment and domain information
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family Back     alignment and domain information
>PRK13232 nifH nitrogenase reductase; Reviewed Back     alignment and domain information
>PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional Back     alignment and domain information
>TIGR01968 minD_bact septum site-determining protein MinD Back     alignment and domain information
>COG0455 flhG Antiactivator of flagellar biosynthesis FleN, an ATPase [Cell motility] Back     alignment and domain information
>PRK13235 nifH nitrogenase reductase; Reviewed Back     alignment and domain information
>PRK11519 tyrosine kinase; Provisional Back     alignment and domain information
>TIGR03453 partition_RepA plasmid partitioning protein RepA Back     alignment and domain information
>PHA02519 plasmid partition protein SopA; Reviewed Back     alignment and domain information
>PRK13705 plasmid-partitioning protein SopA; Provisional Back     alignment and domain information
>PRK13233 nifH nitrogenase reductase; Reviewed Back     alignment and domain information
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases Back     alignment and domain information
>CHL00072 chlL photochlorophyllide reductase subunit L Back     alignment and domain information
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase Back     alignment and domain information
>KOG3022|consensus Back     alignment and domain information
>PRK10818 cell division inhibitor MinD; Provisional Back     alignment and domain information
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein Back     alignment and domain information
>PRK13230 nitrogenase reductase-like protein; Reviewed Back     alignment and domain information
>PHA02518 ParA-like protein; Provisional Back     alignment and domain information
>cd02032 Bchl_like This family of proteins contains bchL and chlL Back     alignment and domain information
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase Back     alignment and domain information
>cd02033 BchX Chlorophyllide reductase converts chlorophylls into bacteriochlorophylls by reducing the chlorin B-ring Back     alignment and domain information
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional Back     alignment and domain information
>TIGR01287 nifH nitrogenase iron protein Back     alignment and domain information
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK13234 nifH nitrogenase reductase; Reviewed Back     alignment and domain information
>PRK13849 putative crown gall tumor protein VirC1; Provisional Back     alignment and domain information
>PRK13236 nitrogenase reductase; Reviewed Back     alignment and domain information
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning] Back     alignment and domain information
>TIGR02016 BchX chlorophyllide reductase iron protein subunit X Back     alignment and domain information
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein Back     alignment and domain information
>cd03111 CpaE_like This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster Back     alignment and domain information
>PRK10037 cell division protein; Provisional Back     alignment and domain information
>cd03110 Fer4_NifH_child This protein family's function is unkown Back     alignment and domain information
>PRK00090 bioD dithiobiotin synthetase; Reviewed Back     alignment and domain information
>PRK13231 nitrogenase reductase-like protein; Reviewed Back     alignment and domain information
>cd02038 FleN-like FleN is a member of the Fer4_NifH superfamily Back     alignment and domain information
>cd02042 ParA ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation Back     alignment and domain information
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon Back     alignment and domain information
>TIGR00347 bioD dethiobiotin synthase Back     alignment and domain information
>TIGR00064 ftsY signal recognition particle-docking protein FtsY Back     alignment and domain information
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK10867 signal recognition particle protein; Provisional Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>COG1149 MinD superfamily P-loop ATPase containing an inserted ferredoxin domain [Energy production and conversion] Back     alignment and domain information
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins Back     alignment and domain information
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D Back     alignment and domain information
>PRK13886 conjugal transfer protein TraL; Provisional Back     alignment and domain information
>TIGR01425 SRP54_euk signal recognition particle protein SRP54 Back     alignment and domain information
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms Back     alignment and domain information
>PF13500 AAA_26: AAA domain; PDB: 3OF5_A 2IOJ_A 4A0G_B 4A0R_A 4A0H_B 4A0F_B 3FMI_C 3FPA_D 3FMF_C 3FGN_A Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>cd03114 ArgK-like The function of this protein family is unkown Back     alignment and domain information
>PRK05632 phosphate acetyltransferase; Reviewed Back     alignment and domain information
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) Back     alignment and domain information
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments Back     alignment and domain information
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional Back     alignment and domain information
>TIGR00959 ffh signal recognition particle protein Back     alignment and domain information
>COG4963 CpaE Flp pilus assembly protein, ATPase CpaE [Intracellular trafficking and secretion] Back     alignment and domain information
>cd03113 CTGs CTP synthetase (CTPs) is a two-domain protein, which consists of an N-terminal synthetase domain and C-terminal glutaminase domain Back     alignment and domain information
>TIGR00750 lao LAO/AO transport system ATPase Back     alignment and domain information
>TIGR00313 cobQ cobyric acid synthase CobQ Back     alignment and domain information
>PRK12374 putative dithiobiotin synthetase; Provisional Back     alignment and domain information
>PF00142 Fer4_NifH: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; InterPro: IPR000392 This entry represents members of the NifH/BchL/ChlL family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
3iqw_A334 Amppnp Complex Of C. Therm. Get3 Length = 334 1e-68
3ibg_A348 Crystal Structure Of Aspergillus Fumigatus Get3 Wit 3e-68
2woo_A329 Nucleotide-Free Form Of S. Pombe Get3 Length = 329 4e-67
3io3_A348 Get3 With Adp From D. Hansenii In Closed Form Lengt 7e-62
2woj_A354 Adp-Alf4 Complex Of S. Cerevisiae Get3 Length = 354 2e-58
3a36_A362 Structural Insight Into The Membrane Insertion Of T 2e-58
3sja_A362 Crystal Structure Of S. Cerevisiae Get3 In The Open 2e-58
3vlc_A354 Crystal Structure Of S. Cerevisiae Get3 In The Semi 2e-58
3idq_A369 Crystal Structure Of S. Cerevisiae Get3 At 3.7 Angs 2e-58
3zq6_A324 Adp-Alf4 Complex Of M. Therm. Trc40 Length = 324 3e-33
3ug6_A349 Crystal Structure Of Get3 From Methanocaldococcus J 8e-32
1f48_A 589 Crystal Structure Of The Escherichia Coli Arsenite- 3e-05
>pdb|3IQW|A Chain A, Amppnp Complex Of C. Therm. Get3 Length = 334 Back     alignment and structure 
Iteration: 1

 Score =  256 bits (655), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 138/284 (48%), Positives = 175/284 (61%), Gaps = 16/284 (5%)
Query: 22  THNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEAXXXXXXXXXXX 81
            HN+SDAF+QKF      V G DNL+AMEIDPN      S  D+L+ +            
Sbjct: 55  AHNLSDAFSQKFGKEARLVEGFDNLYAMEIDPNG-----SMQDLLAGQTGDGDAGMGGV- 108
Query: 82  XINDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERG 141
               V+ DL    PGIDEAMS+AEVLK V  +++  +VFDTAPTGHTLR L FP  +E+ 
Sbjct: 109 ---GVMQDLAYAIPGIDEAMSFAEVLKQVNSLSYETIVFDTAPTGHTLRFLQFPTVLEKA 165
Query: 142 LSKILALRNQIGPFLTQIGTLFGLADF----TSDNIAGKFEELLGNVREMNAQFRDPAKS 197
           L+K+  L  Q G  L   G L G        T  ++  K + L   + E+NAQF+D   +
Sbjct: 166 LAKVSQLSGQYGSLLN--GILGGSGTLPNGQTLSDVMEKLDSLRVTISEVNAQFKDERLT 223
Query: 198 TFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAK 257
           TFVCVCI EFLSLYETER++QELA  GIDT  I+VNQL+F     D C  C+ R R Q K
Sbjct: 224 TFVCVCIPEFLSLYETERMIQELANYGIDTHCIVVNQLLFPKPGSD-CEQCTARRRMQKK 282
Query: 258 YLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEP 301
           YLDQI +LY+E+F+V K+PL  EE+RG  ++E FS ML+ PF P
Sbjct: 283 YLDQIEELYDEEFNVVKMPLLVEEVRGKERLEKFSEMLIKPFVP 326
>pdb|3IBG|A Chain A, Crystal Structure Of Aspergillus Fumigatus Get3 With Bound Adp Length = 348 Back     alignment and structure
>pdb|2WOO|A Chain A, Nucleotide-Free Form Of S. Pombe Get3 Length = 329 Back     alignment and structure
>pdb|3IO3|A Chain A, Get3 With Adp From D. Hansenii In Closed Form Length = 348 Back     alignment and structure
>pdb|2WOJ|A Chain A, Adp-Alf4 Complex Of S. Cerevisiae Get3 Length = 354 Back     alignment and structure
>pdb|3A36|A Chain A, Structural Insight Into The Membrane Insertion Of Tail- Anchored Proteins By Get3 Length = 362 Back     alignment and structure
>pdb|3SJA|A Chain A, Crystal Structure Of S. Cerevisiae Get3 In The Open State In Complex With Get1 Cytosolic Domain Length = 362 Back     alignment and structure
>pdb|3VLC|A Chain A, Crystal Structure Of S. Cerevisiae Get3 In The Semi Open Conformation In Complex With Get1 Cytosolic Domain At 4.5 Angstrom Resolution Length = 354 Back     alignment and structure
>pdb|3IDQ|A Chain A, Crystal Structure Of S. Cerevisiae Get3 At 3.7 Angstrom Resolution Length = 369 Back     alignment and structure
>pdb|3ZQ6|A Chain A, Adp-Alf4 Complex Of M. Therm. Trc40 Length = 324 Back     alignment and structure
>pdb|3UG6|A Chain A, Crystal Structure Of Get3 From Methanocaldococcus Jannaschii Length = 349 Back     alignment and structure
>pdb|1F48|A Chain A, Crystal Structure Of The Escherichia Coli Arsenite-Translocating Atpase Length = 589 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
2woo_A329 ATPase GET3; tail-anchored, membrane protein, targ 4e-92
3io3_A348 DEHA2D07832P; chaperone, membrane traffic, ATPase; 1e-85
3iqw_A334 Tail-anchored protein targeting factor GET3; ATPas 2e-84
3ug7_A349 Arsenical pump-driving ATPase; tail-anchored, memb 3e-83
2woj_A354 ATPase GET3; tail-anchored, membrane protein, targ 2e-81
3zq6_A324 Putative arsenical pump-driving ATPase; tail-ancho 6e-79
1ihu_A 589 Arsenical pump-driving ATPase; aluminum fluoride, 3e-65
1ihu_A589 Arsenical pump-driving ATPase; aluminum fluoride, 2e-60
3igf_A374 ALL4481 protein; two-domained protein consisting o 1e-55
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe} Length = 329 Back     alignment and structure
 Score =  275 bits (706), Expect = 4e-92
 Identities = 127/285 (44%), Positives = 172/285 (60%), Gaps = 14/285 (4%)

Query: 23  HNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM 82
           HN+SDAF  KF     KV G DNL AMEIDPN+             E    +        
Sbjct: 59  HNLSDAFGTKFGKDARKVPGFDNLSAMEIDPNLS----------IQEMTEQADQQNPNNP 108

Query: 83  INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGL 142
           ++ ++ DL    PGIDEA+++AE+LK +K M F  V+FDTAPTGHTLR L+FP  +E+ L
Sbjct: 109 LSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKAL 168

Query: 143 SKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCV 202
            K+  L ++ GP + Q+G++ G  +    ++ GK E +  N+ E+N QF++P  +TFVCV
Sbjct: 169 GKLGGLSSRFGPMINQMGSIMG-VNANEQDLFGKMESMRANISEVNKQFKNPDLTTFVCV 227

Query: 203 CIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQI 262
           CI+EFLSLYETER++QEL    IDT NI+VNQL+        C  C  R + Q KYL QI
Sbjct: 228 CISEFLSLYETERMIQELTSYEIDTHNIVVNQLLL--DPNTTCPQCMARRKMQQKYLAQI 285

Query: 263 LDLYEEDFHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTNKISE 307
            +LY EDFHV K+P    E+RG   +++FS MLV P+       E
Sbjct: 286 EELY-EDFHVVKVPQVPAEVRGTEALKSFSEMLVKPYVYPTSGKE 329
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii} Length = 348 Back     alignment and structure
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A* Length = 334 Back     alignment and structure
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A* Length = 349 Back     alignment and structure
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A* Length = 354 Back     alignment and structure
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 324 Back     alignment and structure
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Length = 589 Back     alignment and structure
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Length = 589 Back     alignment and structure
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP} Length = 374 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
3iqw_A334 Tail-anchored protein targeting factor GET3; ATPas 100.0
3io3_A348 DEHA2D07832P; chaperone, membrane traffic, ATPase; 100.0
3ug7_A349 Arsenical pump-driving ATPase; tail-anchored, memb 100.0
3zq6_A324 Putative arsenical pump-driving ATPase; tail-ancho 100.0
2woo_A329 ATPase GET3; tail-anchored, membrane protein, targ 100.0
2woj_A354 ATPase GET3; tail-anchored, membrane protein, targ 100.0
3igf_A374 ALL4481 protein; two-domained protein consisting o 100.0
1ihu_A 589 Arsenical pump-driving ATPase; aluminum fluoride, 100.0
1ihu_A589 Arsenical pump-driving ATPase; aluminum fluoride, 99.96
3la6_A286 Tyrosine-protein kinase WZC; P-loop protein, nucle 98.78
3kjh_A254 CO dehydrogenase/acetyl-COA synthase complex, acce 98.73
1wcv_1257 SOJ, segregation protein; ATPase, bacterial, chrom 98.67
2ph1_A262 Nucleotide-binding protein; alpha-beta protein, st 98.65
3bfv_A271 CAPA1, CAPB2, membrane protein CAPA1, protein tyro 98.64
3cio_A299 ETK, tyrosine-protein kinase ETK; WZC, escherichia 98.61
3end_A307 Light-independent protochlorophyllide reductase ir 98.6
2oze_A298 ORF delta'; para, walker type atpases, DNA segrega 98.57
3ea0_A245 ATPase, para family; alpha-beta-alpha sandwich, st 98.56
1g3q_A237 MIND ATPase, cell division inhibitor; alpha-beta-a 98.48
3pg5_A361 Uncharacterized protein; structural genomics, PSI- 98.47
1hyq_A263 MIND, cell division inhibitor (MIND-1); MINC, FTSZ 98.45
4dzz_A206 Plasmid partitioning protein PARF; deviant walker 98.39
3k9g_A267 PF-32 protein; ssgcid, SBRI, decode biostructures, 98.21
2afh_E289 Nitrogenase iron protein 1; nitrogen fixation, iro 98.21
3q9l_A260 Septum site-determining protein MIND; ATPase, bact 98.2
1cp2_A269 CP2, nitrogenase iron protein; oxidoreductase; 1.9 98.15
3ez2_A398 Plasmid partition protein A; type IA, DNA binding, 98.09
3fwy_A314 Light-independent protochlorophyllide reductase I 98.04
3ez9_A403 Para; DNA binding, winged-HTH, partition, biosynth 97.97
3cwq_A209 Para family chromosome partitioning protein; alpha 97.93
3fkq_A373 NTRC-like two-domain protein; RER070207001320, str 97.65
1byi_A224 Dethiobiotin synthase; biotin synthesis, cyclo-lig 97.37
3of5_A228 Dethiobiotin synthetase; structural genomics, cent 97.08
2xxa_A433 Signal recognition particle protein; protein trans 96.94
3fgn_A251 Dethiobiotin synthetase; biotin biosynthesis, BIOD 96.91
1j8m_F297 SRP54, signal recognition 54 kDa protein; signalin 96.76
2xj4_A286 MIPZ; replication, cell division, ATPase, WACA; 1. 96.15
3qxc_A242 Dethiobiotin synthetase; DTBS, structural genomics 95.46
3dm5_A443 SRP54, signal recognition 54 kDa protein; protein- 94.97
1zu4_A320 FTSY; GTPase, signal recognition particle, SRP, re 94.35
1ls1_A295 Signal recognition particle protein; FFH, SRP54, S 94.33
2j37_W504 Signal recognition particle 54 kDa protein (SRP54) 93.93
2ffh_A425 Protein (FFH); SRP54, signal recognition particle, 92.14
1g5t_A196 COB(I)alamin adenosyltransferase; P-loop protein, 87.58
4a0g_A 831 Adenosylmethionine-8-amino-7-oxononanoate aminotra 80.11
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A* Back     alignment and structure
Probab=100.00  E-value=9.2e-53  Score=397.75  Aligned_cols=289  Identities=47%  Similarity=0.751  Sum_probs=213.3

Q ss_pred             hhhhHHhCCCcEEEEecCCCCChhhhhccCCCCCCeeeCCCCCeEEEEecchHHHHhhcccchhhhhhhCCccccccCCC
Q psy2008           3 ENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM   82 (311)
Q Consensus         3 ~~~~aa~~G~rtLlvS~DPa~sL~d~l~~~l~~~p~~v~~~~nL~a~eid~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~   82 (311)
                      +|..+|+.|+||||+++||++|+++.||.+.+..|+.+.+.+||+++++|+...+++|+.      .+........ ..+
T Consensus        36 lA~~la~~g~~vllid~D~~~~l~~~l~~~~~~~~~~v~~~~~L~~~~id~~~~~~~~~~------~~~~~~~~~~-~~l  108 (334)
T 3iqw_A           36 LAIQLAKVRRSVLLLSTDPAHNLSDAFSQKFGKEARLVEGFDNLYAMEIDPNGSMQDLLA------GQTGDGDAGM-GGV  108 (334)
T ss_dssp             HHHHHTTSSSCEEEEECCSSCHHHHHHTSCCCSSCEECTTCSSEEEEECCC-----------------------------
T ss_pred             HHHHHHhCCCcEEEEECCCCCChhHHhccccCCCceeecCCCCceeeecCHHHHHHHHHH------Hhhccccccc-ccc
Confidence            566778899999999999999999999999999999998889999999999999999983      1211100000 112


Q ss_pred             chhHHHHHhhcCCCHHHHHHHHHHHHHHhcCCCcEEEEcCCCchHHHHhhhhHHHHHHHHHHHHHHHhhhchhhhhhhhh
Q psy2008          83 INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFLTQIGTL  162 (311)
Q Consensus        83 ~~~~~~~~~~~~PG~~E~~aL~~l~~~~~~~~yD~IV~Dt~Ptg~tLrlL~lP~~l~~~l~~l~~l~~k~~~~~~~l~~~  162 (311)
                        .++.++....||++|++++.++.+++++++||+|||||||||||||||++|+.+.||++++++++++++++.+++.+.
T Consensus       109 --~~~~~~~~~~Pg~~e~~~~~~~~~~~~~~~yD~VIiDtpPtg~tLrlL~lp~~l~~~l~~~~~~~~~~~~~~~~~~~~  186 (334)
T 3iqw_A          109 --GVMQDLAYAIPGIDEAMSFAEVLKQVNSLSYETIVFDTAPTGHTLRFLQFPTVLEKALAKVSQLSGQYGSLLNGILGG  186 (334)
T ss_dssp             ------------CCHHHHHHHHHHHHHHHTSSCSEEEEECCCHHHHHHHHTHHHHC------------------------
T ss_pred             --hhhHHhhcCCCCHHHHHHHHHHHHHHHhCCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence              344566667899999999999999999999999999999999999999999999999999999999998888877776


Q ss_pred             cCC--CCCCchHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEecCCcccHHHHHHHHHHHHhcCCCcceEEEcCCc-CcC
Q psy2008         163 FGL--ADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLV-FYS  239 (311)
Q Consensus       163 ~g~--~~~~~d~~~~~l~~~~~~~~~~~~~L~dp~~T~~~lVt~pe~l~v~Et~rl~~~L~~~gi~v~~vvvNrv~-~~~  239 (311)
                      +|.  +....+++++.++++++++++++++|+||+.|+|++||+|+.+++.|++|+++.|+++|+++.++|+|+++ |+.
T Consensus       187 ~g~~p~~~~~~~~~~~l~~~~~~~~~~~~~L~dp~~t~~vlVt~pe~~~~~ea~r~~~~L~~~gi~v~gvVvN~~~~p~~  266 (334)
T 3iqw_A          187 SGTLPNGQTLSDVMEKLDSLRVTISEVNAQFKDERLTTFVCVCIPEFLSLYETERMIQELANYGIDTHCIVVNQLLFPKP  266 (334)
T ss_dssp             -----------CCHHHHHHHHHHHHHHHHHHTCTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTCCEEEEEEEEECCCCT
T ss_pred             hcCCcccccHHHHHHHHHHHHHHHHHHHHHhhCCCCeeEEEEECCCccHHHHHHHHHHHHHHCCCCccEEEECCCcCccc
Confidence            652  13456789999999999999999999999999999999999999999999999999999999999999999 433


Q ss_pred             ccccchHHHHHHHHHHHHHHHHHHhhhcCC-CcEEEecCCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy2008         240 ASVDACALCSTRYRTQAKYLDQILDLYEED-FHVTKLPLQSEEIRGVAKVEAFSRMLVTPFEPTN  303 (311)
Q Consensus       240 ~~~~~~~~~~~r~~~q~~~l~~i~~~f~~~-~pv~~vp~~~~e~~g~~~L~~l~~~l~~~~~~~~  303 (311)
                      .  ..|++|++|++.|+++|+++.+.|+ + +|++.+|+++.||.|+++|++|++.|+++.+|-.
T Consensus       267 ~--~~~~~~~~r~~~q~~~l~~i~~~~~-~~~~~~~~pl~~~e~~G~~~L~~~~~~l~~~~~~~~  328 (334)
T 3iqw_A          267 G--SDCEQCTARRRMQKKYLDQIEELYD-EEFNVVKMPLLVEEVRGKERLEKFSEMLIKPFVPPE  328 (334)
T ss_dssp             T--CCCHHHHHHHHHHHHHHHHHHHHHT-TTSEEEEEECCSSCCCHHHHHHHHHHHHHSCCCCCC
T ss_pred             C--CcCHHHHHHHHHHHHHHHHHHHhcc-CCCCEEEecCCCCCCCCHHHHHHHHHHHcCCCCCcc
Confidence            2  4799999999999999999999998 7 9999999999999999999999999999976643
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii} Back     alignment and structure
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A* Back     alignment and structure
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe} Back     alignment and structure
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A* Back     alignment and structure
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP} Back     alignment and structure
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Back     alignment and structure
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A* Back     alignment and structure
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli} Back     alignment and structure
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A* Back     alignment and structure
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A* Back     alignment and structure
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A* Back     alignment and structure
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A* Back     alignment and structure
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli} Back     alignment and structure
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes} Back     alignment and structure
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum} Back     alignment and structure
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A* Back     alignment and structure
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae} Back     alignment and structure
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10 Back     alignment and structure
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A* Back     alignment and structure
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A Back     alignment and structure
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A Back     alignment and structure
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A* Back     alignment and structure
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10 Back     alignment and structure
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A Back     alignment and structure
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} Back     alignment and structure
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A Back     alignment and structure
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP} Back     alignment and structure
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale} Back     alignment and structure
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A Back     alignment and structure
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp} Back     alignment and structure
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9 Back     alignment and structure
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A* Back     alignment and structure
>1j8m_F SRP54, signal recognition 54 kDa protein; signaling protein; 2.00A {Acidianus ambivalens} SCOP: a.24.13.1 c.37.1.10 PDB: 1j8y_F Back     alignment and structure
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A Back     alignment and structure
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A Back     alignment and structure
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus} Back     alignment and structure
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A Back     alignment and structure
>1ls1_A Signal recognition particle protein; FFH, SRP54, SRP, GTPase, ultrahigh resolution, protein transport; 1.10A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 1jpn_B* 1jpj_A* 1ry1_U* 2j45_A* 1o87_A* 2c04_A* 2j46_A* 1rj9_B* 2c03_A* 2j7p_A* 1okk_A* 2cnw_A* 1ng1_A* 2xkv_A 3ng1_A 1ffh_A 2ng1_A* Back     alignment and structure
>2j37_W Signal recognition particle 54 kDa protein (SRP54); ribosome, SRP, translation/RNA; 8.00A {Canis SP} PDB: 1wgw_A Back     alignment and structure
>2ffh_A Protein (FFH); SRP54, signal recognition particle, GTPase, M domain, RNA-binding, signal sequence-binding, helix-turn-helix, protein targeting; 3.20A {Thermus aquaticus} SCOP: a.24.13.1 a.36.1.1 c.37.1.10 PDB: 2iy3_A Back     alignment and structure
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A* Back     alignment and structure
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 311
d1ihua1296 c.37.1.10 (A:1-296) Arsenite-translocating ATPase 3e-32
d1ihua2279 c.37.1.10 (A:308-586) Arsenite-translocating ATPas 3e-23
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Length = 296 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

 Score =  119 bits (298), Expect = 3e-32
 Identities = 51/269 (18%), Positives = 92/269 (34%), Gaps = 25/269 (9%)

Query: 23  HNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM 82
            N+   F+Q   +T   +  +  L A+EIDP     +     +  D   G   +     +
Sbjct: 48  SNVGQVFSQTIGNTIQAIASVPGLSALEIDPQAAAQQYRARIV--DPIKGVLPDDVVSSI 105

Query: 83  INDVLNDLINGFPGIDEAMSYAEVLKLVKGMNFSVVVFDTAPTGHTLRLLSFPQNIERGL 142
              +           DE         L+    F  ++FDTAPTGHT+RLL  P      +
Sbjct: 106 NEQLSGACTTEIAAFDEFTGLLTDASLLT--RFDHIIFDTAPTGHTIRLLQLPGAWSSFI 163

Query: 143 SKILALRNQIGPFLTQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCV 202
                  + +GP                       E+             DP ++  V V
Sbjct: 164 DSNPEGASCLGPM-------------------AGLEKQREQYAYAVEALSDPKRTRLVLV 204

Query: 203 CIAEFLSLYETERLVQELAKTGIDTRNIIVNQLVFYSASVDACALCSTRYRTQAKYLDQI 262
              +  +L E  R   ELA  G+  + +++N ++  + + +   L +  +  + + L  +
Sbjct: 205 ARLQKSTLQEVARTHLELAAIGLKNQYLVINGVLPKTEAAN-DTLAAAIWEREQEALANL 263

Query: 263 LDLYEEDFHVTKLPLQSEEIRGVAKVEAF 291
                       L LQ   + GV+ +   
Sbjct: 264 PADL-AGLPTDTLFLQPVNMVGVSALSRL 291
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Length = 279 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
d1ihua1296 Arsenite-translocating ATPase ArsA {Escherichia co 100.0
d1ihua2279 Arsenite-translocating ATPase ArsA {Escherichia co 99.93
d1hyqa_232 Cell division regulator MinD {Archaeon Archaeoglob 98.36
d1g3qa_237 Cell division regulator MinD {Archaeon Pyrococcus 98.15
d1cp2a_269 Nitrogenase iron protein {Clostridium pasteurianum 98.11
d2afhe1289 Nitrogenase iron protein {Azotobacter vinelandii [ 98.05
d1byia_224 Dethiobiotin synthetase {Escherichia coli [TaxId: 97.74
d2qy9a2211 GTPase domain of the signal recognition particle r 90.95
d1okkd2207 GTPase domain of the signal recognition particle r 90.78
d1vmaa2213 GTPase domain of the signal recognition particle r 86.6
d1ls1a2207 GTPase domain of the signal sequence recognition p 86.02
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-40  Score=298.99  Aligned_cols=258  Identities=21%  Similarity=0.276  Sum_probs=202.5

Q ss_pred             hhhhHHhCCCcEEEEecCCCCChhhhhccCCCCCCeeeCCCCCeEEEEecchHHHHhhcccchhhhhhhCCccccccCCC
Q psy2008           3 ENQYSKALDKEASGYSRPKTHNISDAFNQKFTSTPTKVNGIDNLFAMEIDPNIRQTELSQDDILSDEANGGSGNMFGGGM   82 (311)
Q Consensus         3 ~~~~aa~~G~rtLlvS~DPa~sL~d~l~~~l~~~p~~v~~~~nL~a~eid~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~   82 (311)
                      +|...|++|+|||||++||+|||+++||.+++..|+.+.+.+|+++.++|++..+++++.      .....    +....
T Consensus        28 lA~~lA~~G~rVLlvD~Dp~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----~~~~~   97 (296)
T d1ihua1          28 TAIRLAEQGKRVLLVSTDPASNVGQVFSQTIGNTIQAIASVPGLSALEIDPQAAAQQYRA------RIVDP----IKGVL   97 (296)
T ss_dssp             HHHHHHHTTCCEEEEECCTTCCHHHHTTSCCCSSCEECTTSTTEEEEECCHHHHHHHHHH------HHHGG----GTTTS
T ss_pred             HHHHHHHCCCCEEEEeCCCCCCHHHHhCCCCcccccccccccccchhccChhhHHHHHHh------hccch----hhhcc
Confidence            577778899999999999999999999999999999988889999999999999999983      22111    11112


Q ss_pred             chhHHH--HHhhcCCCHHHHHHHHHHHHHHh----cCCCcEEEEcCCCchHHHHhhhhHHHHHHHHHHHHHHHhhhchhh
Q psy2008          83 INDVLN--DLINGFPGIDEAMSYAEVLKLVK----GMNFSVVVFDTAPTGHTLRLLSFPQNIERGLSKILALRNQIGPFL  156 (311)
Q Consensus        83 ~~~~~~--~~~~~~PG~~E~~aL~~l~~~~~----~~~yD~IV~Dt~Ptg~tLrlL~lP~~l~~~l~~l~~l~~k~~~~~  156 (311)
                      ....+.  ......++..+...+.++...+.    .++||+||+||||++|+++++.+|..+.+|+.........+.   
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yD~iviD~pp~~~~l~~~~l~~~~~~~~~~~~~~~~~~~---  174 (296)
T d1ihua1          98 PDDVVSSINEQLSGACTTEIAAFDEFTGLLTDASLLTRFDHIIFDTAPTGHTIRLLQLPGAWSSFIDSNPEGASCLG---  174 (296)
T ss_dssp             CHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHCTTHHHHCSEEEESSCCCHHHHHHHHCGGGGTCCC------CCCCG---
T ss_pred             cccchhhhHHhhhhhhhhhHHHHHHHHHHHHHhhhcccceEEEeccCCCchHHHHHhHHHHHHHHHhhccchhhhcc---
Confidence            122221  11223344555556666655553    357999999999999999999999999999875443322221   


Q ss_pred             hhhhhhcCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCCCceEEEEecCCcccHHHHHHHHHHHHhcCCCcceEEEcCCc
Q psy2008         157 TQIGTLFGLADFTSDNIAGKFEELLGNVREMNAQFRDPAKSTFVCVCIAEFLSLYETERLVQELAKTGIDTRNIIVNQLV  236 (311)
Q Consensus       157 ~~l~~~~g~~~~~~d~~~~~l~~~~~~~~~~~~~L~dp~~T~~~lVt~pe~l~v~Et~rl~~~L~~~gi~v~~vvvNrv~  236 (311)
                          ...|.            ..+.+.+..+.+.+.||+.|+|++||+||++++.+++|+++.|+++|+++.++|+||++
T Consensus       175 ----~~~~~------------~~~~~~~~~~~~~~~~~~~t~~~lVt~pe~~~~~~~~r~~~~l~~~gi~~~~vVvN~v~  238 (296)
T d1ihua1         175 ----PMAGL------------EKQREQYAYAVEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQYLVINGVL  238 (296)
T ss_dssp             ----GGGGC------------CSCHHHHHHHHHHHHCTTTEEEEEEEESCHHHHHHHHHHHHHHHHHTCCCEEEEEEEEC
T ss_pred             ----cccch------------hHHHHHHHHHHhhccCcccceeeEecCcchhHHHHHHHHHHHHHhcCCCceEEEEcCCc
Confidence                11121            12445666777889999999999999999999999999999999999999999999999


Q ss_pred             CcCccccchHHHHHHHHHHHHHHHHHHhhhcCCCcEEEecCCCCCCCCHHHHHHH
Q psy2008         237 FYSASVDACALCSTRYRTQAKYLDQILDLYEEDFHVTKLPLQSEEIRGVAKVEAF  291 (311)
Q Consensus       237 ~~~~~~~~~~~~~~r~~~q~~~l~~i~~~f~~~~pv~~vp~~~~e~~g~~~L~~l  291 (311)
                      |.... ..|.+|+.+.+.|+++++++.+.|. ++|+..+|+++.|+.|+++|+++
T Consensus       239 p~~~~-~~~~~~~~~~~~q~~~l~~i~~~~~-~~~~~~vp~~~~e~~G~~aL~~l  291 (296)
T d1ihua1         239 PKTEA-ANDTLAAAIWEREQEALANLPADLA-GLPTDTLFLQPVNMVGVSALSRL  291 (296)
T ss_dssp             CGGGG-SSCHHHHHHHHHHHHHHHTCCHHHH-TSCEEEEECCSSCCCSHHHHHHT
T ss_pred             CccCC-CCCHHHHHHHHHHHHHHHHHHHHcc-CCceEEecCCCCCCcCHHHHHHH
Confidence            87543 5789999999999999999999999 99999999999999999998875
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} Back     information, alignment and structure
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]} Back     information, alignment and structure
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure