Psyllid ID: psy2082

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKVRLKMSATRAQTV
cccccEEEEEEcccccEEEEEccccEEEccccccccccEEEEEccccccEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEEccccccccccHHHHHHHHHHcccccccEEEccccccccEEEEcccccccccccEEEEEEEEEEEcccccccccEEEEEEEEEcccccccccccccEEEEEccEEEccccEEEEEEEccccccccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEcccEEEEEEEEEEcccccccccccEEEEEEEEEEEEEEEccccccEEEEEcEEEEcccccccccccccccc
ccccEEEEEEEccccEEEEEEcccccEccccccccccEEEEEcHHHHcccEEEEEEEEEEEccccHHHEEcEEEHHHHEEEEEEEccccccccccccHHHHHHHHHHccccccEEEEcccccccEEEEccccccccccccEEEEEEEEEEccHHccccccccEEEEEEEEEEccccccccccEEEEEcEEcccccEEEEEEEccEEEEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEcccEEEEEEEEcccccccccccEEEEEEEEEEEEEEEEEcccccEEEEEcEEEccccccccccccccccc
mvanfkvfkkcspngkltlymgkrdfvdyvtgvepidgvvvfeedyiqdrkVFGQVVCSfrygreedeilGLNFQKELYLASeqiyprsekqhtsLTKMQDCllkklgpkaypftfnitpaappsvtlqpgpdetgepcgvTYYVKLFVgenetdrshrrSTVALGIRKiqyapskngrqpctvvrkdfmlspgdlelEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLfqngqfrhsvdcvethlaspdpkdaFGIVVSYMVKVKLYLGAlggelsaelpfilmhPKVRLKMSATRAQTV
mvanfkvfkkcspngkltlymgKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFvgenetdrshrrstvalgirkiqyapskngrqpcTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKVRLKMSATRAQTV
MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKlylgalggelsaelPFILMHPKVRLKMSATRAQTV
****FKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYP********LTKMQDCLLKKLGPKAYPFTFNITP*****************PCGVTYYVKLFVGEN********STVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKVR***********
***NFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEK******KMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQP**DETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYA**********VVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFIL*****************
MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKVRL**********
**ANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPK*************
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MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQNGQFRHSVDCVETHLASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKVRLKMSATRAQTV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query314 2.2.26 [Sep-21-2011]
P55274381 Arrestin homolog OS=Helio N/A N/A 0.996 0.821 0.607 1e-121
P15372364 Phosrestin-2 OS=Drosophil yes N/A 0.955 0.824 0.597 1e-117
P51486363 Phosrestin-2 OS=Calliphor N/A N/A 0.968 0.837 0.581 1e-115
P51484400 Arrestin, lateral eye OS= N/A N/A 0.945 0.742 0.430 4e-78
P32122407 Arrestin homolog OS=Locus N/A N/A 0.917 0.707 0.438 1e-77
Q4R562410 Beta-arrestin-1 OS=Macaca N/A N/A 0.939 0.719 0.438 2e-76
P19107401 Phosrestin-1 OS=Drosophil no N/A 0.949 0.743 0.425 1e-75
P17870418 Beta-arrestin-1 OS=Bos ta yes N/A 0.942 0.708 0.438 1e-75
P49407418 Beta-arrestin-1 OS=Homo s yes N/A 0.942 0.708 0.435 3e-75
P29066418 Beta-arrestin-1 OS=Rattus yes N/A 0.942 0.708 0.435 3e-75
>sp|P55274|ARRH_HELVI Arrestin homolog OS=Heliothis virescens PE=3 SV=1 Back     alignment and function desciption
 Score =  435 bits (1119), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 220/362 (60%), Positives = 264/362 (72%), Gaps = 49/362 (13%)

Query: 1   MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSF 60
           MV NFKVFKKC+PNGK+TLYM KRDFVD+++ VEPIDGVV+ +E+Y++ RKVFGQ+VC+F
Sbjct: 1   MVYNFKVFKKCAPNGKITLYMAKRDFVDHISTVEPIDGVVLLDEEYVRGRKVFGQMVCTF 60

Query: 61  RYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITP 120
           RYGREEDE++GLNF KEL+LASEQIYP  EK++  L++ Q+ L+KKLG  A PF   + P
Sbjct: 61  RYGREEDEVMGLNFYKELFLASEQIYPPPEKRNYELSRTQERLIKKLGDGAIPFRLTVPP 120

Query: 121 AAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQ 180
            AP SV LQPG ++ GEPCGV YYVK+FVG++E DRSHRRSTVALGIRK+QYAP+K G Q
Sbjct: 121 GAPGSVILQPGLEDDGEPCGVQYYVKIFVGDSEIDRSHRRSTVALGIRKVQYAPAKPGPQ 180

Query: 181 PCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDV 240
           PCTVVRKDF+LSPG LELE+TLDKQLY H E +AV++C+RN+SNKVVKKIKA +QQGVDV
Sbjct: 181 PCTVVRKDFVLSPGQLELELTLDKQLYIHGETVAVNMCVRNHSNKVVKKIKACIQQGVDV 240

Query: 241 VLFQNGQFRHSVDCVET----------------HLA------------------------ 260
           VLFQNGQ+R+ V  +ET                HL                         
Sbjct: 241 VLFQNGQYRNIVASIETQDGCPLQPGSSLQKVLHLTPTLAHNRDKRGIALDGQLKRSDTT 300

Query: 261 --------SPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPKV-RLKMSATRA 311
                    PD +DAFGIVVSY  KVKLYLGA+ GEL AELPFILMHPK  R+KM    +
Sbjct: 301 LASTTLLLDPDQRDAFGIVVSYSAKVKLYLGAISGELVAELPFILMHPKEGRVKMIHADS 360

Query: 312 QT 313
           Q 
Sbjct: 361 QA 362

Heliothis virescens (taxid: 7102)
>sp|P15372|ARRA_DROME Phosrestin-2 OS=Drosophila melanogaster GN=Arr1 PE=1 SV=1 Back     alignment and function description
>sp|P51486|ARR1_CALVI Phosrestin-2 OS=Calliphora vicina GN=ARR1 PE=2 SV=1 Back     alignment and function description
>sp|P51484|ARRH_LIMPO Arrestin, lateral eye OS=Limulus polyphemus PE=2 SV=1 Back     alignment and function description
>sp|P32122|ARRH_LOCMI Arrestin homolog OS=Locusta migratoria PE=2 SV=1 Back     alignment and function description
>sp|Q4R562|ARRB1_MACFA Beta-arrestin-1 OS=Macaca fascicularis GN=ARRB1 PE=2 SV=1 Back     alignment and function description
>sp|P19107|ARRB_DROME Phosrestin-1 OS=Drosophila melanogaster GN=Arr2 PE=1 SV=2 Back     alignment and function description
>sp|P17870|ARRB1_BOVIN Beta-arrestin-1 OS=Bos taurus GN=ARRB1 PE=1 SV=1 Back     alignment and function description
>sp|P49407|ARRB1_HUMAN Beta-arrestin-1 OS=Homo sapiens GN=ARRB1 PE=1 SV=2 Back     alignment and function description
>sp|P29066|ARRB1_RAT Beta-arrestin-1 OS=Rattus norvegicus GN=Arrb1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
157136383383 phosrestin ii (arrestin a) (arrestin 1) 0.958 0.785 0.662 1e-134
338858979384 arrestin 1c [Culex pipiens pallens] 0.958 0.783 0.66 1e-132
170033242384 phosrestin ii [Culex quinquefasciatus] g 0.958 0.783 0.66 1e-132
58392333383 AGAP010134-PA [Anopheles gambiae str. PE 0.996 0.817 0.643 1e-131
91082137377 PREDICTED: similar to arrestin1 isoform 0.949 0.790 0.654 1e-128
124107284375 arrestin1 precursor [Dianemobius nigrofa 0.958 0.802 0.650 1e-128
332372734379 unknown [Dendroctonus ponderosae] 0.987 0.817 0.634 1e-126
383851766377 PREDICTED: arrestin homolog [Megachile r 0.984 0.819 0.611 1e-125
328783656374 PREDICTED: arrestin homolog isoform 1 [A 1.0 0.839 0.605 1e-125
380024627375 PREDICTED: phosrestin-2-like [Apis flore 1.0 0.837 0.605 1e-125
>gi|157136383|ref|XP_001663732.1| phosrestin ii (arrestin a) (arrestin 1) [Aedes aegypti] gi|108869981|gb|EAT34206.1| AAEL013535-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 232/350 (66%), Positives = 274/350 (78%), Gaps = 49/350 (14%)

Query: 1   MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQD-RKVFGQVVCS 59
           MV NFKVFKKCSPNGK+T+YMGKRDFVD+V+GVEPIDG+VV +++YI+D RK+FGQ++CS
Sbjct: 1   MVYNFKVFKKCSPNGKVTIYMGKRDFVDHVSGVEPIDGIVVLDDEYIRDHRKIFGQIICS 60

Query: 60  FRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNIT 119
           FRYGREEDE++GLNFQKELYLASEQIYP+ EK     TK+QD LLKKLGP A+PFTFN++
Sbjct: 61  FRYGREEDEVMGLNFQKELYLASEQIYPQPEKSGKEQTKLQDRLLKKLGPNAFPFTFNVS 120

Query: 120 PAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGR 179
           P AP SVTLQPG  + GEPCGV+YYVK+F GE+ETDR+HRRSTV+LGIRKIQ+AP+K G+
Sbjct: 121 PNAPSSVTLQPGEKDQGEPCGVSYYVKIFAGESETDRTHRRSTVSLGIRKIQFAPTKQGQ 180

Query: 180 QPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVD 239
           QPCTVVRKDFMLSPG+LELEVTLDKQLY H E+I V+ICIRNNSNKVVKK+KAM+QQGVD
Sbjct: 181 QPCTVVRKDFMLSPGELELEVTLDKQLYLHGERIGVNICIRNNSNKVVKKVKAMIQQGVD 240

Query: 240 VVLFQNGQFRHSVDCVETH----------------------------------------- 258
           VVLFQNG +R++V  +ET                                          
Sbjct: 241 VVLFQNGSYRNTVASIETSEGCPIQPGSSLQKVMYLTPLLASNKQRRGIALDGQIKRHEQ 300

Query: 259 -------LASPDPKDAFGIVVSYMVKVKLYLGALGGELSAELPFILMHPK 301
                  LA PD +DAFGI+VSY VKVKL+LGALGGEL+AELPF+LMHPK
Sbjct: 301 CLASTTLLAQPDQRDAFGIIVSYAVKVKLFLGALGGELAAELPFVLMHPK 350

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|338858979|gb|AEJ33052.1| arrestin 1c [Culex pipiens pallens] Back     alignment and taxonomy information
>gi|170033242|ref|XP_001844487.1| phosrestin ii [Culex quinquefasciatus] gi|167873894|gb|EDS37277.1| phosrestin ii [Culex quinquefasciatus] gi|338858975|gb|AEJ33050.1| arrestin 1 [Culex pipiens pallens] gi|338858977|gb|AEJ33051.1| arrestin 1b [Culex pipiens pallens] Back     alignment and taxonomy information
>gi|58392333|ref|XP_319289.2| AGAP010134-PA [Anopheles gambiae str. PEST] gi|14572580|emb|CAC39103.2| arrestin [Anopheles gambiae] gi|14581441|gb|AAG54081.1| arrestin [Anopheles gambiae] gi|55236335|gb|EAA13874.3| AGAP010134-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|91082137|ref|XP_966595.1| PREDICTED: similar to arrestin1 isoform 1 [Tribolium castaneum] gi|270008184|gb|EFA04632.1| arrestin 1 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|124107284|dbj|BAF45419.1| arrestin1 precursor [Dianemobius nigrofasciatus] Back     alignment and taxonomy information
>gi|332372734|gb|AEE61509.1| unknown [Dendroctonus ponderosae] Back     alignment and taxonomy information
>gi|383851766|ref|XP_003701402.1| PREDICTED: arrestin homolog [Megachile rotundata] Back     alignment and taxonomy information
>gi|328783656|ref|XP_003250326.1| PREDICTED: arrestin homolog isoform 1 [Apis mellifera] gi|328783658|ref|XP_003250327.1| PREDICTED: arrestin homolog isoform 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|380024627|ref|XP_003696095.1| PREDICTED: phosrestin-2-like [Apis florea] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
FB|FBgn0000120364 Arr1 "Arrestin 1" [Drosophila 0.872 0.752 0.643 3.2e-104
FB|FBgn0040206 470 krz "kurtz" [Drosophila melano 0.799 0.534 0.543 2e-79
ZFIN|ZDB-GENE-060824-1 418 arrb1 "arrestin, beta 1" [Dani 0.802 0.602 0.511 3.2e-73
UNIPROTKB|F1MZR6409 ARRB1 "Beta-arrestin-1" [Bos t 0.777 0.596 0.504 1.4e-72
UNIPROTKB|J9NY42405 ARRB1 "Uncharacterized protein 0.773 0.6 0.502 4.7e-72
UNIPROTKB|P17870 418 ARRB1 "Beta-arrestin-1" [Bos t 0.777 0.583 0.504 1.6e-71
UNIPROTKB|F1SUN0 413 ARRB1 "Uncharacterized protein 0.777 0.590 0.5 2.6e-71
ZFIN|ZDB-GENE-040426-1332408 arrb2b "arrestin, beta 2b" [Da 0.808 0.622 0.480 2.6e-71
UNIPROTKB|F1PQM2 418 ARRB1 "Uncharacterized protein 0.777 0.583 0.5 3.3e-71
UNIPROTKB|P49407 418 ARRB1 "Beta-arrestin-1" [Homo 0.777 0.583 0.5 3.3e-71
FB|FBgn0000120 Arr1 "Arrestin 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 940 (336.0 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
 Identities = 179/278 (64%), Positives = 224/278 (80%)

Query:     1 MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYI-QDRKVFGQVVCS 59
             MV NFKVFKKCSPN  +TLYM +RDFVD VT VEPIDG++V +++Y+ Q+RK+F Q+VC+
Sbjct:     1 MVVNFKVFKKCSPNNMITLYMNRRDFVDSVTQVEPIDGIIVLDDEYVRQNRKIFVQLVCN 60

Query:    60 FRYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNIT 119
             FRYGRE+DE++GL FQKEL L S+Q+ P  +KQ   LTKMQ+ LLKKLG  AYPF   + 
Sbjct:    61 FRYGREDDEMIGLRFQKELTLVSQQVCP-PQKQDIQLTKMQERLLKKLGSNAYPFVMQMP 119

Query:   120 PAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGR 179
             P++P SV LQ    +  +PCGV Y+VK+F G+++ DRSHRRST+ LGIRK+QYAP+K G 
Sbjct:   120 PSSPASVVLQQKASDESQPCGVQYFVKIFTGDSDCDRSHRRSTINLGIRKVQYAPTKQGI 179

Query:   180 QPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVD 239
             QPCTVVRKDF+LSPG+LELEVTLDKQLY H EKI+V+IC+RNNSNKVVKKIKAMVQQGVD
Sbjct:   180 QPCTVVRKDFLLSPGELELEVTLDKQLYHHGEKISVNICVRNNSNKVVKKIKAMVQQGVD 239

Query:   240 VVLFQNGQFRHSVDCVETHLASP-DPKDAFGIVVSYMV 276
             VVLFQNGQFR+++  +ET    P +P  +   V+ Y+V
Sbjct:   240 VVLFQNGQFRNTIAFMETSEGCPLNPGSSLQKVM-YLV 276
GO:0002046 "opsin binding" evidence=ISS;TAS
GO:0016060 "metarhodopsin inactivation" evidence=IGI;NAS
GO:0016059 "deactivation of rhodopsin mediated signaling" evidence=IGI;TAS
GO:0016028 "rhabdomere" evidence=IDA
GO:0007602 "phototransduction" evidence=NAS
GO:0006897 "endocytosis" evidence=IMP
GO:0045494 "photoreceptor cell maintenance" evidence=IMP
GO:0005737 "cytoplasm" evidence=IDA
FB|FBgn0040206 krz "kurtz" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060824-1 arrb1 "arrestin, beta 1" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1MZR6 ARRB1 "Beta-arrestin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|J9NY42 ARRB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P17870 ARRB1 "Beta-arrestin-1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1SUN0 ARRB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-1332 arrb2b "arrestin, beta 2b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PQM2 ARRB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P49407 ARRB1 "Beta-arrestin-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P29066ARRB1_RATNo assigned EC number0.43550.94260.7081yesN/A
P51485ARRB_CAEELNo assigned EC number0.41190.94260.6804yesN/A
P51486ARR1_CALVINo assigned EC number0.58190.96810.8374N/AN/A
P49407ARRB1_HUMANNo assigned EC number0.43550.94260.7081yesN/A
Q5RCR4ARRB2_PONABNo assigned EC number0.41970.98080.7530yesN/A
Q8BWG8ARRB1_MOUSENo assigned EC number0.42970.94260.7081yesN/A
P55274ARRH_HELVINo assigned EC number0.60770.99680.8215N/AN/A
P17870ARRB1_BOVINNo assigned EC number0.43830.94260.7081yesN/A
P15372ARRA_DROMENo assigned EC number0.59710.95540.8241yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
pfam00339148 pfam00339, Arrestin_N, Arrestin (or S-antigen), N- 7e-26
smart01017142 smart01017, Arrestin_C, Arrestin (or S-antigen), C 1e-18
pfam02752136 pfam02752, Arrestin_C, Arrestin (or S-antigen), C- 6e-17
>gnl|CDD|215866 pfam00339, Arrestin_N, Arrestin (or S-antigen), N-terminal domain Back     alignment and domain information 
 Score =  100 bits (250), Expect = 7e-26
 Identities = 49/166 (29%), Positives = 74/166 (44%), Gaps = 27/166 (16%)

Query: 17  LTLYMGKRDFVDYVTGVEPIDGVVVFEED-YIQDRKVFGQVVCSFRYGREEDEILGLNFQ 75
            T+Y+ K D V +    EP+ G V+      I+ R V   +    R G EE E++GL F+
Sbjct: 1   FTIYLDKPDPVYHPG--EPVSGKVLLTTKKPIKARAVKITLKGRARTGWEESEVMGLTFR 58

Query: 76  KELYLASEQIYPRSEKQHTSLTKMQDCLLKK--------LGPKAYPFTFNITPAAPPSVT 127
           K++Y           K+  +    Q+ L KK         G  A+PF+F + P  PPS  
Sbjct: 59  KQIY-----PTVNYSKE--TYLDTQERLWKKKDGSNELPAGTHAFPFSFELPPNCPPSFE 111

Query: 128 LQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYA 173
            QPG        G+ Y VK+ + +    + H+R  V   IRK+   
Sbjct: 112 GQPG--------GIRYEVKVEL-DRPWKKDHKRKKVFTVIRKLDLN 148

Ig-like beta-sandwich fold. Scop reports duplication with C-terminal domain. Length = 148
>gnl|CDD|214976 smart01017, Arrestin_C, Arrestin (or S-antigen), C-terminal domain Back     alignment and domain information
>gnl|CDD|217215 pfam02752, Arrestin_C, Arrestin (or S-antigen), C-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 314
KOG3865|consensus402 100.0
KOG3780|consensus427 99.95
PF02752136 Arrestin_C: Arrestin (or S-antigen), C-terminal do 99.75
PF00339149 Arrestin_N: Arrestin (or S-antigen), N-terminal do 99.61
PF03643275 Vps26: Vacuolar protein sorting-associated protein 98.44
PF13002191 LDB19: Arrestin_N terminal like; InterPro: IPR0243 98.16
PF08737415 Rgp1: Rgp1; InterPro: IPR014848 Rgp1 forms heterod 97.17
PF00339149 Arrestin_N: Arrestin (or S-antigen), N-terminal do 95.28
PF07070218 Spo0M: SpoOM protein; InterPro: IPR009776 This fam 94.86
PF0183599 A2M_N: MG2 domain; InterPro: IPR002890 The protein 88.76
KOG3063|consensus301 88.25
KOG2717|consensus313 88.04
KOG3780|consensus 427 87.72
PF0134576 DUF11: Domain of unknown function DUF11; InterPro: 85.76
PF0020792 A2M: Alpha-2-macroglobulin family; InterPro: IPR00 84.98
TIGR0145153 B_ant_repeat conserved repeat domain. This model r 83.52
PF03643 275 Vps26: Vacuolar protein sorting-associated protein 82.05
>KOG3865|consensus Back     alignment and domain information 
Probab=100.00  E-value=5.2e-113  Score=789.91  Aligned_cols=305  Identities=54%  Similarity=0.930  Sum_probs=294.7

Q ss_pred             CCccceEEEeecCCCcEEEEecceeeEecCCCceeeeeEEEEecceeeceeEEEEEEEeeecccccccccCccccceEEE
Q psy2082           1 MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYL   80 (314)
Q Consensus         1 ~~~~~~vfkk~s~n~~~t~yl~~rd~~d~~~~vd~v~GvV~vd~~~lk~rkv~~~~~~~fryG~~d~dv~gl~f~k~l~~   80 (314)
                      |.+++|||||+|||||||+||||||||||++.||||||||+|||||+|+||||+||+|+|||||||+|||||+||||||+
T Consensus         1 ~~~~~rVFKK~SpNgkiT~YLgkRDFvDhvd~vdPvDGvVlvDpeYlK~RKvfv~L~caFRYGREDldVlGLtFrKdL~~   80 (402)
T KOG3865|consen    1 MKVGTRVFKKASPNGKITVYLGKRDFVDHVDQVDPVDGVVLVDPEYLKDRKVFVQLTCAFRYGREDLDVLGLTFRKDLYL   80 (402)
T ss_pred             CCcceeEeEecCCCCcEEEEecccccccccccccccceeEEEChHHhccceEEEEEEeeeecccccceeeeeEEEeeeEE
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCCCCCCcchhhhhhhccCCCeeEeEEeeCCCCCCCeEEecCCCCCCCCCeEEEEEEEEEEccCCccCcccc
Q psy2082          81 ASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRR  160 (314)
Q Consensus        81 ~~~qv~p~~~~~~~~lt~lq~~l~~k~G~h~fPF~f~LP~~lPsSf~lq~~~~~~G~~g~V~Y~Vka~i~~~~~dr~~K~  160 (314)
                      ++.|+||+.+ ...|||+|||||++|+|.|+|||.|++|+++|||++|||+++|.|++|||+|+||||++++.+||+|||
T Consensus        81 ~~~Qv~Pp~~-~~~plT~lQErLlkKLG~nAyPF~f~~pp~~P~SVtLQp~p~D~gKpcGVdyevkaF~~~s~edk~hKr  159 (402)
T KOG3865|consen   81 ATVQVYPPPE-DSRPLTRLQERLLKKLGSNAYPFTFEFPPNLPCSVTLQPGPEDTGKPCGVDYEVKAFVADSEEDKIHKR  159 (402)
T ss_pred             EEEEeeCCCc-CCCcccHHHHHHHHHhCCCCCceEEeCCCCCCceEEeccCCccCCCcccceEEEEEEecCCcccccccc
Confidence            9999999843 356799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceEEEeeeeccCCCCCCCCCCeEEEeEEEEeeCCcEEEEEEECCccccCCCeEEEEEEEEccccceeEEEEEEEEEeEEE
Q psy2082         161 STVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDV  240 (314)
Q Consensus       161 ~~v~l~irkl~~~p~~~~~~p~~e~~k~f~~s~G~l~l~asldK~~Y~pGE~I~v~v~I~N~Ssk~Vk~Ikv~L~Q~~~~  240 (314)
                      |+|+|+|||+||||..++++|+++++|.|+||+|+|+|+|+|||++|||||+|.+||+|+|||+|+||+||+.+.|++++
T Consensus       160 ~sVrL~IRKvqyAP~~~GpqP~~~v~k~FlmS~~~lhLevsLDkEiYyHGE~isvnV~V~NNsnKtVKkIK~~V~Q~adi  239 (402)
T KOG3865|consen  160 NSVRLVIRKVQYAPLEPGPQPSAEVSKQFLMSDGPLHLEVSLDKEIYYHGEPISVNVHVTNNSNKTVKKIKISVRQVADI  239 (402)
T ss_pred             cceeeeeeeeeecCCCCCCCchhHhhHhhccCCCceEEEEEecchheecCCceeEEEEEecCCcceeeeeEEEeEeeceE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEecCeEEEEEEEEeec------------------------------------------------cCCCCCCCceeEEE
Q psy2082         241 VLFQNGQFRHSVDCVETH------------------------------------------------LASPDPKDAFGIVV  272 (314)
Q Consensus       241 ~~~~~~~~~~~Va~~E~~------------------------------------------------L~~~~~~~~~~I~V  272 (314)
                      ++|++++|+|+||.+|+.                                                +.+++.++.+||.|
T Consensus       240 ~Lfs~aqy~~~VA~~E~~eGc~v~Pgstl~Kvf~l~PllanN~dkrGlALDG~lKhEDtnLASSTii~~~~~re~lGI~V  319 (402)
T KOG3865|consen  240 CLFSTAQYKKPVAMEETDEGCPVAPGSTLSKVFTLTPLLANNKDKRGLALDGKLKHEDTNLASSTIIREGADREALGILV  319 (402)
T ss_pred             EEEecccccceeeeeecccCCccCCCCeeeeeEEechhhhcCcccccccccccccccccccchhheecCCCCcceeEEEE
Confidence            999999999999999876                                                26778899999999


Q ss_pred             EEEEEEEEEECC-CCceeEEEEeEEEecCCCCCcc
Q psy2082         273 SYMVKVKLYLGA-LGGELSAELPFILMHPKVRLKM  306 (314)
Q Consensus       273 sY~vkV~l~v~~-~~~~v~velPi~I~~p~p~~~~  306 (314)
                      ||+|+|+|.+++ .++++.+||||+||||+|.+++
T Consensus       320 sY~VkVkL~vs~ll~ge~~~ElPF~LmhPkP~~~p  354 (402)
T KOG3865|consen  320 SYKVKVKLVVSRLLGGEVAAELPFTLMHPKPGEEP  354 (402)
T ss_pred             EEEEEEEEEEecccCCceeeecceEEecCCCCCCc
Confidence            999999999994 7899999999999999997753

>KOG3780|consensus Back     alignment and domain information
>PF02752 Arrestin_C: Arrestin (or S-antigen), C-terminal domain; InterPro: IPR011022 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli Back     alignment and domain information
>PF00339 Arrestin_N: Arrestin (or S-antigen), N-terminal domain; InterPro: IPR011021 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli Back     alignment and domain information
>PF03643 Vps26: Vacuolar protein sorting-associated protein 26 ; InterPro: IPR005377 The movement of lipid and protein components between intracellular organelles requires the regulated interactions of many molecules Back     alignment and domain information
>PF13002 LDB19: Arrestin_N terminal like; InterPro: IPR024391 This entry represents a predicted Ig-like beta sandwich domain found towards the N terminus of protein LDB19 [] Back     alignment and domain information
>PF08737 Rgp1: Rgp1; InterPro: IPR014848 Rgp1 forms heterodimer with Ric1 (IPR009771 from INTERPRO) which associates with Golgi membranes and functions as a guanyl-nucleotide exchange factor [] Back     alignment and domain information
>PF00339 Arrestin_N: Arrestin (or S-antigen), N-terminal domain; InterPro: IPR011021 G protein-coupled receptors are a large family of signalling molecules that respond to a wide variety of extracellular stimuli Back     alignment and domain information
>PF07070 Spo0M: SpoOM protein; InterPro: IPR009776 This family consists of several bacterial SpoOM proteins which are thought to control sporulation in Bacillus subtilis Back     alignment and domain information
>PF01835 A2M_N: MG2 domain; InterPro: IPR002890 The proteinase-binding alpha-macroglobulins (A2M) [] are large glycoproteins found in the plasma of vertebrates, in the hemolymph of some invertebrates and in reptilian and avian egg white Back     alignment and domain information
>KOG3063|consensus Back     alignment and domain information
>KOG2717|consensus Back     alignment and domain information
>KOG3780|consensus Back     alignment and domain information
>PF01345 DUF11: Domain of unknown function DUF11; InterPro: IPR001434 This group of sequences is represented by a conserved region of about 53 amino acids shared between regions, usually repeated, of proteins from a small number of phylogenetically distant prokaryotes Back     alignment and domain information
>PF00207 A2M: Alpha-2-macroglobulin family; InterPro: IPR001599 This entry contains serum complement C3 and C4 precursors and alpha-macrogrobulins Back     alignment and domain information
>TIGR01451 B_ant_repeat conserved repeat domain Back     alignment and domain information
>PF03643 Vps26: Vacuolar protein sorting-associated protein 26 ; InterPro: IPR005377 The movement of lipid and protein components between intracellular organelles requires the regulated interactions of many molecules Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
3gc3_A385 Crystal Structure Of Arrestin2s And Clathrin Length 7e-73
1g4m_A393 Crystal Structure Of Bovine Beta-Arrestin 1 Length 2e-72
1jsy_A418 Crystal Structure Of Bovine Arrestin-2 Length = 418 3e-72
2wtr_B418 Full Length Arrestin2 Length = 418 7e-72
3p2d_A393 Crystal Structure Of Arrestin-3 Reveals The Basis O 3e-68
1suj_A392 X-Ray Crystal Structure Of Ambystoma Tigrinum Cone 1e-63
1ayr_A368 Arrestin From Bovine Rod Outer Segments Length = 36 9e-52
3ugu_A380 Crystal Structure Of P44 (Splice Variant Of Visual 1e-51
3ugx_A414 Crystal Structure Of Visual Arrestin Length = 414 1e-51
1cf1_A404 Arrestin From Bovine Rod Outer Segments Length = 40 2e-51
>pdb|3GC3|A Chain A, Crystal Structure Of Arrestin2s And Clathrin Length = 385 Back     alignment and structure 
Iteration: 1

 Score =  270 bits (690), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 146/342 (42%), Positives = 207/342 (60%), Gaps = 47/342 (13%)
Query: 6   KVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGRE 65
           +VFKK SPNGKLT+Y+GKRDFVD++  VEP+DGVV+ + +Y+++R+V+  + C+FRYGRE
Sbjct: 7   RVFKKASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTCAFRYGRE 66
Query: 66  EDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPS 125
           + ++LGL F+K+L++A+ Q +P + +    LT++Q+ L+KKLG  AYPFTF I P  P S
Sbjct: 67  DLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCS 126
Query: 126 VTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAPSKNGRQPCTVV 185
           VTLQPGP++TG+ CGV Y VK F  EN  ++ H+R++V L IRK+QYAP + G QP    
Sbjct: 127 VTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAET 186
Query: 186 RKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQGVDVVLFQN 245
            + F++S   L LE +LDK++Y H E I+V++ + NN+NK VKKIK  V+Q  D+ LF  
Sbjct: 187 TRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLFNT 246
Query: 246 GQFRHSV------DCV----------------------------------ETHLASPD-- 263
            Q++  V      D V                                  +T+LAS    
Sbjct: 247 AQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLL 306
Query: 264 ----PKDAFGIVVSYMVKVKXXXXXXXXXXXXXXPFILMHPK 301
                ++  GI+VSY VKVK              PF LMHPK
Sbjct: 307 REGANREILGIIVSYKVKVK-LVVSRGGDVAVELPFTLMHPK 347
>pdb|1G4M|A Chain A, Crystal Structure Of Bovine Beta-Arrestin 1 Length = 393 Back     alignment and structure
>pdb|1JSY|A Chain A, Crystal Structure Of Bovine Arrestin-2 Length = 418 Back     alignment and structure
>pdb|2WTR|B Chain B, Full Length Arrestin2 Length = 418 Back     alignment and structure
>pdb|3P2D|A Chain A, Crystal Structure Of Arrestin-3 Reveals The Basis Of The Difference In Receptor Binding Between Two Non-Visual Subtypes Length = 393 Back     alignment and structure
>pdb|1SUJ|A Chain A, X-Ray Crystal Structure Of Ambystoma Tigrinum Cone Arrestin Length = 392 Back     alignment and structure
>pdb|1AYR|A Chain A, Arrestin From Bovine Rod Outer Segments Length = 368 Back     alignment and structure
>pdb|3UGU|A Chain A, Crystal Structure Of P44 (Splice Variant Of Visual Arrestin) Length = 380 Back     alignment and structure
>pdb|3UGX|A Chain A, Crystal Structure Of Visual Arrestin Length = 414 Back     alignment and structure
>pdb|1CF1|A Chain A, Arrestin From Bovine Rod Outer Segments Length = 404 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
3ugu_A380 S-arrestin; arrestin fold, signal termination, GPC 1e-121
1g4m_A393 Beta-arrestin1; sensory transduction, alternative 1e-120
1suj_A392 CONE arrestin; sensory transduction, signaling pro 1e-119
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A Length = 380 Back     alignment and structure
 Score =  352 bits (903), Expect = e-121
 Identities = 118/355 (33%), Positives = 189/355 (53%), Gaps = 55/355 (15%)

Query: 1   MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSF 60
              N  +FKK S +  +T+Y+GKRD++D+V  VEP+DGVV+ + + ++ ++V+  + C+F
Sbjct: 16  PAPNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAF 75

Query: 61  RYGREEDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITP 120
           RYG+E+ +++GL+F+++LY +  Q++P       + T++Q+ L+KKLG   YPF      
Sbjct: 76  RYGQEDIDVMGLSFRRDLYFSQVQVFPPVGAS-GATTRLQESLIKKLGANTYPFLLTFPD 134

Query: 121 AAPPSVTLQPGPDETGEPCGVTYYVKLFVGEN---ETDRSHRRSTVALGIRKIQYAPSKN 177
             P SV LQP P + G+ CGV + +K F   +   E D+  ++S+V L IRK+Q+AP   
Sbjct: 135 YLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIRKVQHAPRDM 194

Query: 178 GRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQG 237
           G QP       F +S   L L V+L K++Y H E I V++ + N++ K VKKIK +V+Q 
Sbjct: 195 GPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQV 254

Query: 238 VDVVLFQNGQFRHSVDCVE----------------------------------------- 256
            +VVL+ +  +  +V   E                                         
Sbjct: 255 TNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDT 314

Query: 257 -----THLASPDPKDAFGIVVSYMVKVKLYLGALGG-----ELSAELPFILMHPK 301
                T +     K   GI+VSY +KVKL +  L G     E++ E+PF LMHP+
Sbjct: 315 NLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQ 369
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A Length = 393 Back     alignment and structure
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum} Length = 392 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
3ugu_A380 S-arrestin; arrestin fold, signal termination, GPC 100.0
1suj_A392 CONE arrestin; sensory transduction, signaling pro 100.0
1g4m_A393 Beta-arrestin1; sensory transduction, alternative 100.0
2r51_A340 Vacuolar protein sorting-associated protein 26B; r 99.89
2fau_A341 Vacuolar protein sorting 26; arrestin, retromer, p 99.83
2r51_A 340 Vacuolar protein sorting-associated protein 26B; r 92.83
2fau_A 341 Vacuolar protein sorting 26; arrestin, retromer, p 91.47
2p9r_A102 Alpha-2-M, alpha-2-macroglobulin; human alpha2-mac 89.58
3isy_A120 Bsupi, intracellular proteinase inhibitor; intrace 83.89
>3ugu_A S-arrestin; arrestin fold, signal termination, GPCR, outer segment, SIGN protein; 1.85A {Bos taurus} PDB: 3ugx_A 1cf1_A 1ayr_A Back     alignment and structure
Probab=100.00  E-value=9.8e-108  Score=783.00  Aligned_cols=306  Identities=38%  Similarity=0.695  Sum_probs=279.9

Q ss_pred             CCccceEEEeecCCCcEEEEecceeeEecCCCceeeeeEEEEecceeeceeEEEEEEEeeecccccccccCccccceEEE
Q psy2082           1 MVANFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYL   80 (314)
Q Consensus         1 ~~~~~~vfkk~s~n~~~t~yl~~rd~~d~~~~vd~v~GvV~vd~~~lk~rkv~~~~~~~fryG~~d~dv~gl~f~k~l~~   80 (314)
                      |..++|||||+|||||||+||||||||||+++||||||||+|||||+||||||+||+|+|||||||+|||||+|+||||+
T Consensus        16 ~~~~~~VfKK~s~n~klt~YlgkRdfvdh~~~vdpvdGvv~vd~~~~~~rkvf~~l~~~fRYGred~dV~Gl~F~kdl~~   95 (380)
T 3ugu_A           16 PAPNHVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDVMGLSFRRDLYF   95 (380)
T ss_dssp             ----CCCEEEECTTSSEEEEESCSEEEECSSCBCCEEEEEEECHHHHTTCEEEEEEEEEEEECC------CCCEEEEEEE
T ss_pred             cCcceeEEEeeCCCCcEEEEecCceEEeecCcccccceEEEECHHHhCCCEEEEEEEEEEecCCCccccccchhhhhhhh
Confidence            67789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCCCCCCCCcchhhhhhhccCCCeeEeEEeeCCCCCCCeEEecCCCCCCCCCeEEEEEEEEEEccCC---ccCc
Q psy2082          81 ASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENE---TDRS  157 (314)
Q Consensus        81 ~~~qv~p~~~~~~~~lt~lq~~l~~k~G~h~fPF~f~LP~~lPsSf~lq~~~~~~G~~g~V~Y~Vka~i~~~~---~dr~  157 (314)
                      ++.|+||+.+ .+++||++||||++|+|.|+|||+|+||++|||||+|||+++|.|++|+|+|+|||++++++   +|++
T Consensus        96 ~~~qvyP~~~-~~~~lT~lQe~L~kKlG~nayPF~f~LP~~lPsSv~LQp~p~d~Gk~cgV~YeVKafia~~~~~~~dk~  174 (380)
T 3ugu_A           96 SQVQVFPPVG-ASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSVMLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKI  174 (380)
T ss_dssp             EEEEEESCCS-CCCCCCHHHHHHHHHHCTTEEEEEECCCSSCCCSEEECCCTTCCSCCEEEEEEEEEEEEBCCSSSSSBC
T ss_pred             eeEEecCCCC-CCCCCCHHHHHHHHHhCcCceeEEEeCCCCCCCEEEeccCCccCCCccceEEEEEEEEccCcccccccc
Confidence            9999999875 45789999999999999999999999999999999999999999999999999999999987   8999


Q ss_pred             cccceEEEeeeeccCCCCCCCCCCeEEEeEEEEeeCCcEEEEEEECCccccCCCeEEEEEEEEccccceeEEEEEEEEEe
Q psy2082         158 HRRSTVALGIRKIQYAPSKNGRQPCTVVRKDFMLSPGDLELEVTLDKQLYAHNEKIAVSICIRNNSNKVVKKIKAMVQQG  237 (314)
Q Consensus       158 ~K~~~v~l~irkl~~~p~~~~~~p~~e~~k~f~~s~G~l~l~asldK~~Y~pGE~I~v~v~I~N~Ssk~Vk~Ikv~L~Q~  237 (314)
                      ||+++++|+||++|++|...+++|+++++|+|+|++|+|+|+|+|||++|+|||+|.|+++|+|+|+++|++|+++|.|+
T Consensus       175 ~Kr~sV~L~Irklq~aP~~~~~~P~~e~~K~F~~ssGpl~L~vsLdK~~Y~pGE~I~V~v~I~N~Ssk~Vk~Ikv~L~Q~  254 (380)
T 3ugu_A          175 PKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQV  254 (380)
T ss_dssp             CGGGEEEEEEEEEEBCCSCCCCCCEEEEEEECTTCCCEEEEEEEESCSEEETTCCEEEEEEEEECSSSCEEEEEEEEEEE
T ss_pred             cccceEEEeeeecccCCcccCCCCcceEEEEeEecCCCEEEEEEeCCccCcCCCEEEEEEEEEcCCCCeEeEEEEEEEEE
Confidence            99999999999999999988999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEecCeEEEEEEEEeec----------------------------------------c------CCCCCCCceeEE
Q psy2082         238 VDVVLFQNGQFRHSVDCVETH----------------------------------------L------ASPDPKDAFGIV  271 (314)
Q Consensus       238 ~~~~~~~~~~~~~~Va~~E~~----------------------------------------L------~~~~~~~~~~I~  271 (314)
                      +++++|++++|+++||++|+.                                        |      .++..++..||.
T Consensus       255 ~~v~l~s~~~y~~~Va~~E~~epV~pgst~~k~~~l~P~l~~n~~krglALdG~lk~edtnLASsT~~~~~~~ke~~GI~  334 (380)
T 3ugu_A          255 TNVVLYSSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGIL  334 (380)
T ss_dssp             EEECSSSCCEEEEEEEEEECSCCBCTTEEEEEEEEECCCGGGCSCCTTSCBSSCTTCTTCCBCCCCCCCTTCCGGGGSEE
T ss_pred             EEEEEecCCeEEEEEEEeccCCcCCCCCeEEeeEEEEEecccCCceeeEEecceeccCCCcccceeEecCCCCCcceEEE
Confidence            999999999999999998854                                        2      556788999999


Q ss_pred             EEEEEEEEEEECCCC-----ceeEEEEeEEEecCCCCCccC
Q psy2082         272 VSYMVKVKLYLGALG-----GELSAELPFILMHPKVRLKMS  307 (314)
Q Consensus       272 VsY~vkV~l~v~~~~-----~~v~velPi~I~~p~p~~~~~  307 (314)
                      |||+|+|+|.++++|     +|+.+||||+||||+|+++..
T Consensus       335 VsY~VkVkl~v~~lgg~~~~sdv~~elPf~Lmhp~P~~~~~  375 (380)
T 3ugu_A          335 VSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQPEDPDT  375 (380)
T ss_dssp             EEEEEEEEEEECCCTTCSSCEEEEEEEEEEEEBCCC-----
T ss_pred             EEEEEEEEEEEecccCCccccceEEEecccccCCCCCCccc
Confidence            999999999998543     599999999999999987543
>1suj_A CONE arrestin; sensory transduction, signaling protein; 2.38A {Ambystoma tigrinum} Back     alignment and structure
>1g4m_A Beta-arrestin1; sensory transduction, alternative splicing, signaling protein; 1.90A {Bos taurus} SCOP: b.1.18.11 b.1.18.11 PDB: 1g4r_A 3gd1_C 1jsy_A 1zsh_A* 2wtr_A 2wtr_B 3gc3_A 3p2d_A Back     alignment and structure
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A Back     alignment and structure
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens} Back     alignment and structure
>2r51_A Vacuolar protein sorting-associated protein 26B; retromer, fibronectin III, arrestin domain, membrane, phosphorylation, protein transport; 2.10A {Mus musculus} PDB: 3lh9_A 3lh8_A 3lha_A Back     alignment and structure
>2fau_A Vacuolar protein sorting 26; arrestin, retromer, protein transport; HET: CAF; 2.10A {Homo sapiens} Back     alignment and structure
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens} Back     alignment and structure
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 314
d1g4ma1171 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), be 2e-95
d1cf1a1173 b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), v 4e-91
d1cf1a2211 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), 2e-33
d1g4ma2218 b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), 8e-31
>d1g4ma1 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Length = 171 Back     information, alignment and structure

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Arrestin/Vps26-like
domain: Arrestin
species: Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]

 Score =  277 bits (710), Expect = 2e-95
 Identities = 92/169 (54%), Positives = 132/169 (78%)

Query: 6   KVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGRE 65
           +VFKK SPNGKLT+Y+GKRDFVD++  VEP+DGVV+ + +Y+++R+V+  + C+FRYGRE
Sbjct: 3   RVFKKASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTCAFRYGRE 62

Query: 66  EDEILGLNFQKELYLASEQIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPS 125
           + ++LGL F+K+L++A+ Q +P + +    LT++Q+ L+KKLG  AYPFTF I P  P S
Sbjct: 63  DLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCS 122

Query: 126 VTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTVALGIRKIQYAP 174
           VTLQPGP++TG+ CGV Y VK F  EN  ++ H+R++V L IRK+QYAP
Sbjct: 123 VTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAP 171
>d1cf1a1 b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Length = 173 Back     information, alignment and structure
>d1cf1a2 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Length = 211 Back     information, alignment and structure
>d1g4ma2 b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Length = 218 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
d1g4ma1171 Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId 100.0
d1cf1a1173 Arrestin {Cow (Bos taurus), visual arrestin [TaxId 100.0
d1cf1a2211 Arrestin {Cow (Bos taurus), visual arrestin [TaxId 99.97
d1g4ma2218 Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId 99.96
d1ex0a2112 Transglutaminase, two C-terminal domains {Human (H 84.44
d1vjja2115 Transglutaminase, two C-terminal domains {Human (H 82.61
>d1g4ma1 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Back     information, alignment and structure
class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Arrestin/Vps26-like
domain: Arrestin
species: Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]

Probab=100.00  E-value=5.8e-80  Score=524.05  Aligned_cols=171  Identities=54%  Similarity=1.007  Sum_probs=167.7

Q ss_pred             cceEEEeecCCCcEEEEecceeeEecCCCceeeeeEEEEecceeeceeEEEEEEEeeecccccccccCccccceEEEEEE
Q psy2082           4 NFKVFKKCSPNGKLTLYMGKRDFVDYVTGVEPIDGVVVFEEDYIQDRKVFGQVVCSFRYGREEDEILGLNFQKELYLASE   83 (314)
Q Consensus         4 ~~~vfkk~s~n~~~t~yl~~rd~~d~~~~vd~v~GvV~vd~~~lk~rkv~~~~~~~fryG~~d~dv~gl~f~k~l~~~~~   83 (314)
                      +.|||||+|||||||+||||||||||+++||||||||+||||||||||||+||+|+|||||||+|||||+|+||+|+++.
T Consensus         1 g~rVFKKsSpNgklTvYLgKRDfvDh~~~vdpvDGVVlvDpeylk~rKVf~~l~c~FRYGRed~dVmGL~Frkdl~l~~~   80 (171)
T d1g4ma1           1 GTRVFKKASPNGKLTVYLGKRDFVDHIDLVEPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDVLGLTFRKDLFVANV   80 (171)
T ss_dssp             CEEEEEEECTTSSCEEEESCSEEEECSSCBCCEEEEEECCHHHHTTCEEEEEEEEEEEESCTTCCCTTTCEEEEEEEEEE
T ss_pred             CCceeeecCCCCcEEEEeccceEEecCCcccccceEEEECHHHhCcceeEEEEEEEEeecccchhccccceeeeeeecce
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCCCcchhhhhhhccCCCeeEeEEeeCCCCCCCeEEecCCCCCCCCCeEEEEEEEEEEccCCccCccccceE
Q psy2082          84 QIYPRSEKQHTSLTKMQDCLLKKLGPKAYPFTFNITPAAPPSVTLQPGPDETGEPCGVTYYVKLFVGENETDRSHRRSTV  163 (314)
Q Consensus        84 qv~p~~~~~~~~lt~lq~~l~~k~G~h~fPF~f~LP~~lPsSf~lq~~~~~~G~~g~V~Y~Vka~i~~~~~dr~~K~~~v  163 (314)
                      |+||+.++++.+||++||+|++|+|.|+|||+|++|+++|||++||||++|.|++|||+|+||||++++.+||+||||+|
T Consensus        81 QvyPp~~~~~~~lT~lQerLlkKLG~nA~PF~f~~p~~~P~SVtLQP~~~d~gkpcGVdyevk~f~ae~~dek~hkR~sV  160 (171)
T d1g4ma1          81 QSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLPCSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSV  160 (171)
T ss_dssp             EEESCSTTSCCCCCHHHHHHHHHSCTTEEEEEECCCTTSCCCEEEECCGGGGGGCEEEEEEEEEEEESSTTSCCCGGGEE
T ss_pred             eecCCCccCCCCCcHHHHHHHHhhccCceeeeecCCCCCCCeEEeccCCccCCCcceeEEEEEEEEcCCccccccccceE
Confidence            99998876677899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEeeeeccCCC
Q psy2082         164 ALGIRKIQYAP  174 (314)
Q Consensus       164 ~l~irkl~~~p  174 (314)
                      +|+|||+||||
T Consensus       161 rL~IRKvqyAP  171 (171)
T d1g4ma1         161 RLVIRKVQYAP  171 (171)
T ss_dssp             EEEEEEEECCC
T ss_pred             EEEEEEeeecC
Confidence            99999999998
>d1cf1a1 b.1.18.11 (A:10-182) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Back     information, alignment and structure
>d1cf1a2 b.1.18.11 (A:183-393) Arrestin {Cow (Bos taurus), visual arrestin [TaxId: 9913]} Back     information, alignment and structure
>d1g4ma2 b.1.18.11 (A:176-393) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]} Back     information, alignment and structure
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} Back     information, alignment and structure