Psyllid ID: psy2094
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| 350407693 | 628 | PREDICTED: hypothetical protein LOC10074 | 0.882 | 0.479 | 0.360 | 1e-48 | |
| 332374952 | 349 | unknown [Dendroctonus ponderosae] | 0.882 | 0.862 | 0.349 | 3e-48 | |
| 328778924 | 415 | PREDICTED: MOSC domain-containing protei | 0.888 | 0.730 | 0.359 | 2e-47 | |
| 380030626 | 676 | PREDICTED: uncharacterized protein LOC10 | 0.888 | 0.448 | 0.356 | 2e-47 | |
| 340717405 | 442 | PREDICTED: MOSC domain-containing protei | 0.868 | 0.669 | 0.354 | 5e-47 | |
| 383856386 | 404 | PREDICTED: MOSC domain-containing protei | 0.885 | 0.747 | 0.343 | 5e-45 | |
| 91080253 | 347 | PREDICTED: similar to molybdopterin cofa | 0.900 | 0.884 | 0.309 | 9e-43 | |
| 380026215 | 343 | PREDICTED: MOSC domain-containing protei | 0.868 | 0.862 | 0.358 | 1e-40 | |
| 114052577 | 336 | Mo-molybdopterin cofactor sulfurase [Bom | 0.862 | 0.875 | 0.359 | 3e-40 | |
| 307188961 | 343 | MOSC domain-containing protein 1, mitoch | 0.876 | 0.871 | 0.350 | 2e-39 |
| >gi|350407693|ref|XP_003488163.1| PREDICTED: hypothetical protein LOC100741218 [Bombus impatiens] | Back alignment and taxonomy information |
|---|
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 186/319 (58%), Gaps = 18/319 (5%)
Query: 19 WKQVGYVTEINIYPLKSGYYLSVEKAFCDFK--GLSRIGQG-YPLSDRCFLLFNRSKGTY 75
W++VG + E+ +YPLKSG +V + CDF G+ G + L DR FL++N G +
Sbjct: 307 WEKVGQIQELYMYPLKSGRGKNVRE--CDFTEYGMKLDNAGKFALRDRMFLVYNEETGRF 364
Query: 76 ISNIAHNRLVLVKVTALDKDLIQFSVHNDDTYTPFVLNMADFNRSGSVHTI--RMYEKDL 133
+ + L+LV ++ +D++ ++ P V+ N + + +M+ +
Sbjct: 365 QTGRQYPTLILVSLSVVDENKVKLEA----VGMPSVIFEVPKNLMDASEAVQCKMWWGEP 420
Query: 134 VHAFDCGDAASEWFSRFLLGKEDPDIRLGYDCDEQRKLNGTIYERYRHHYGDHITNEDMG 193
V+ DCG +EW SRFL G +RLGY ++R + ++++ Y + +ED G
Sbjct: 421 VNCIDCGTEPAEWLSRFLTGTTS-GLRLGYTRMDRRDVFVDPWKKFTQVYR-TLRSEDTG 478
Query: 194 KYAYLASYMLMNEASVKDLNERLQLKGETEVSIHNFRGNIILSTDQAYEEDNWDWVRLNE 253
++ LASYMLM +SV+ LNE+L ET VS FR NI++ST Q +EED W+W+++ E
Sbjct: 479 LFSDLASYMLMTTSSVEQLNEKL----ETPVSTLQFRPNILVSTQQPFEEDEWEWIKIGE 534
Query: 254 DIILRGMKPCTRCTMTCLDPETGQKNLRTEPLKTLRSYRGPIGEKARALEKGSPRLGLYC 313
+++R +KPC+RC + ++PE G + + EPLKTL+S+R P + +LE +P +G+YC
Sbjct: 535 RVVIRNVKPCSRCKLVGVNPENGVMD-KEEPLKTLKSFREPTDPERISLEGKAPVMGIYC 593
Query: 314 GLYSRGTVQKGDPVYVAVS 332
GLY G VQ GD V++ S
Sbjct: 594 GLYVTGRVQIGDEVFIHRS 612
|
Source: Bombus impatiens Species: Bombus impatiens Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332374952|gb|AEE62617.1| unknown [Dendroctonus ponderosae] | Back alignment and taxonomy information |
|---|
| >gi|328778924|ref|XP_003249565.1| PREDICTED: MOSC domain-containing protein 1, mitochondrial-like [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|380030626|ref|XP_003698944.1| PREDICTED: uncharacterized protein LOC100869847 [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|340717405|ref|XP_003397174.1| PREDICTED: MOSC domain-containing protein 1, mitochondrial-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|383856386|ref|XP_003703690.1| PREDICTED: MOSC domain-containing protein 1, mitochondrial-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
| >gi|91080253|ref|XP_973258.1| PREDICTED: similar to molybdopterin cofactor sulfurase (mosc) [Tribolium castaneum] gi|270005692|gb|EFA02140.1| hypothetical protein TcasGA2_TC007790 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|380026215|ref|XP_003696850.1| PREDICTED: MOSC domain-containing protein 2, mitochondrial-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|114052577|ref|NP_001040259.1| Mo-molybdopterin cofactor sulfurase [Bombyx mori] gi|87248539|gb|ABD36322.1| Mo-molybdopterin cofactor sulfurase [Bombyx mori] | Back alignment and taxonomy information |
|---|
| >gi|307188961|gb|EFN73478.1| MOSC domain-containing protein 1, mitochondrial [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 341 | ||||||
| UNIPROTKB|G5E6I5 | 343 | MOSC1 "Uncharacterized protein | 0.565 | 0.562 | 0.355 | 8.3e-39 | |
| MGI|MGI:1913362 | 340 | Marc1 "mitochondrial amidoxime | 0.513 | 0.514 | 0.354 | 1.3e-34 | |
| UNIPROTKB|G3V6I4 | 339 | Mosc1 "RCG20363, isoform CRA_a | 0.521 | 0.525 | 0.355 | 2.1e-34 | |
| UNIPROTKB|F1NXH1 | 348 | MARC2 "Uncharacterized protein | 0.551 | 0.540 | 0.349 | 2.4e-33 | |
| FB|FBgn0033451 | 340 | CG1665 [Drosophila melanogaste | 0.853 | 0.855 | 0.304 | 1.3e-29 | |
| UNIPROTKB|Q5VT66 | 337 | MARC1 "MOSC domain-containing | 0.601 | 0.608 | 0.345 | 1.1e-25 | |
| UNIPROTKB|Q1LZH1 | 336 | MARC2 "MOSC domain-containing | 0.568 | 0.577 | 0.330 | 3.6e-25 | |
| UNIPROTKB|F1Q1D9 | 304 | MARC1 "Uncharacterized protein | 0.595 | 0.667 | 0.346 | 9.7e-25 | |
| UNIPROTKB|F1S9I9 | 336 | MARC2 "MOSC domain-containing | 0.557 | 0.565 | 0.367 | 1.2e-24 | |
| UNIPROTKB|G3X6L2 | 335 | MOSC2 "Uncharacterized protein | 0.565 | 0.576 | 0.330 | 2e-24 |
| UNIPROTKB|G5E6I5 MOSC1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 75/211 (35%), Positives = 114/211 (54%)
Query: 123 VHTIRMYEKDLVHAFDCGDAASEWFSRFLLGKEDPDIRLGYDCDEQRKLNGTIYERYRHH 182
VH R++ + + DCG+AA++W + FL K P RL + + R H
Sbjct: 151 VHRCRVHGLE-IEGRDCGEAAAQWITNFL--KTQP-YRLVH-------FEPHMQPRNSHQ 199
Query: 183 YGDHITNEDMGKYAYLASYMLMNEASVKDLNERLQLKGETEVSIHNFRGNIILSTDQAYE 242
D + D Y+ + +++++EAS+ DLN RL+ K V I NFR NI++S Y
Sbjct: 200 VEDAFSPTDQIPYSDASPFLILSEASLADLNSRLEKK----VKIANFRPNIVISGCGVYA 255
Query: 243 EDNWDWVRLNEDIILRGMKPCTRCTMTCLDPETGQKNLRTEPLKTLRSYRGPIGEKARAL 302
ED+W+ + + D+ L+ + C+RC +T +DP+TG + R EPL+TL+SYR R L
Sbjct: 256 EDSWNELLIG-DVELKRVMACSRCILTTVDPDTGVMS-RKEPLETLKSYR-LCDPSERKL 312
Query: 303 EKGSPRLGLYCGLYSRGTVQKGDPVYVAVSE 333
SP G Y L + GT+ GDPVY+ E
Sbjct: 313 YGKSPLFGQYFVLENPGTIHVGDPVYLLGQE 343
|
|
| MGI|MGI:1913362 Marc1 "mitochondrial amidoxime reducing component 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3V6I4 Mosc1 "RCG20363, isoform CRA_a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NXH1 MARC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0033451 CG1665 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5VT66 MARC1 "MOSC domain-containing protein 1, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q1LZH1 MARC2 "MOSC domain-containing protein 2, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1Q1D9 MARC1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1S9I9 MARC2 "MOSC domain-containing protein 2, mitochondrial" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3X6L2 MOSC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| COG3217 | 270 | COG3217, COG3217, Uncharacterized Fe-S protein [Ge | 1e-25 | |
| PLN02724 | 805 | PLN02724, PLN02724, Molybdenum cofactor sulfurase | 1e-15 | |
| pfam03476 | 118 | pfam03476, MOSC_N, MOSC N-terminal beta barrel dom | 2e-11 | |
| pfam03473 | 124 | pfam03473, MOSC, MOSC domain | 3e-09 |
| >gnl|CDD|225758 COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only] | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-25
Identities = 75/307 (24%), Positives = 126/307 (41%), Gaps = 49/307 (15%)
Query: 24 YVTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNR 83
++++ IYP+KS + +A D GL+ DR F+L + G +I+
Sbjct: 3 TLSQLYIYPVKSLRGERLSRALVDASGLA--------GDRRFMLVD-PDGRFITARRRPA 53
Query: 84 LVLVKVTALDKDLIQFSVHNDDT-YTPFVLNMADFNRSGSVHTIRMYEKDLVHAFDCGDA 142
+V D ++ + + + Y F AD R+ D A GDA
Sbjct: 54 MVRFTPAYEH-DGLRLTAPDGEELYVRF----ADAQRAPV-----EVWGDHFTADAAGDA 103
Query: 143 ASEWFSRFLLGKEDPDIRLGYDCDEQRKLNGTIYERYRHHYGDHITNEDMGKYAYLASYM 202
A++W S FL + L +D + R + +T +A +
Sbjct: 104 ANDWLSGFL----GRAVSLRWDGAGFAR-------RVKAGPAVPVT------FADGYPIL 146
Query: 203 LMNEASVKDLNERLQLKGETEVSIHNFRGNIILSTDQAYEEDNWDWVRLNEDIILRGMKP 262
L N AS+ DL R + + FR N+++ + A+ ED+W +R+ + +KP
Sbjct: 147 LFNTASLADLRRR----VPANLEMERFRPNLVVEGEDAFAEDSWKSIRIG-GVRFDVVKP 201
Query: 263 CTRCTMTCLDPETGQKNLRTEPLKTLRSYRGPIGEKARALEKGSPRLGLYCGLYSRGTVQ 322
C+RC T +DP+TG++ EPL TL +R + G G + G ++
Sbjct: 202 CSRCIFTTVDPDTGERRPGGEPLFTLNRFR-------TNPDAGGVLFGQNLIARNEGRIR 254
Query: 323 KGDPVYV 329
GD V V
Sbjct: 255 VGDAVEV 261
|
Length = 270 |
| >gnl|CDD|215384 PLN02724, PLN02724, Molybdenum cofactor sulfurase | Back alignment and domain information |
|---|
| >gnl|CDD|217584 pfam03476, MOSC_N, MOSC N-terminal beta barrel domain | Back alignment and domain information |
|---|
| >gnl|CDD|217583 pfam03473, MOSC, MOSC domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| PLN02724 | 805 | Molybdenum cofactor sulfurase | 100.0 | |
| KOG2362|consensus | 336 | 100.0 | ||
| COG3217 | 270 | Uncharacterized Fe-S protein [General function pre | 100.0 | |
| PF03476 | 120 | MOSC_N: MOSC N-terminal beta barrel domain; InterP | 99.97 | |
| PF03473 | 133 | MOSC: MOSC domain; InterPro: IPR005302 Molybdenum | 99.95 | |
| KOG2142|consensus | 728 | 99.17 | ||
| PRK14499 | 308 | molybdenum cofactor biosynthesis protein MoaC/MOSC | 98.68 | |
| PRK11536 | 223 | 6-N-hydroxylaminopurine resistance protein; Provis | 98.19 | |
| COG2258 | 210 | Uncharacterized protein conserved in bacteria [Fun | 98.0 |
| >PLN02724 Molybdenum cofactor sulfurase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-63 Score=528.46 Aligned_cols=277 Identities=23% Similarity=0.320 Sum_probs=235.2
Q ss_pred EceEEEeEEeccccccCceeeeeEEecccCcccccCCCCCCCceEEEEEcCCCeeEeecCCCceeeEEEEEcC-CCeEEE
Q psy2094 21 QVGYVTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNRLVLVKVTALD-KDLIQF 99 (341)
Q Consensus 21 ~~~~V~~L~iyPVKS~~g~~v~~~~l~~~Gl~~D~~~~~l~DR~f~l~d~~~g~~lt~r~~p~L~~i~~~~~~-~~~L~l 99 (341)
..++|++|||||||||+|++|++|.|++.||++| |+|||+|. +|+|+|||++|+|++|++.++. ++.|+|
T Consensus 516 ~~~~v~~l~iYPVKS~~g~~v~~a~~~~~Gl~~D--------R~~~lvd~-~g~~~t~r~~p~l~~i~~~~~~~~~~l~l 586 (805)
T PLN02724 516 DSHRLKSITVYPIKSCAGFSVERWPLSETGLLYD--------REWMIQSL-TGEILTQKKVPEMCLITTFIDLESGKLVV 586 (805)
T ss_pred CCCEEEEEEEeccccCCCceeeEEEEeccccccc--------ceEEEEcC-CCcEEEcccCceEEEEEeEEecCCCeEEE
Confidence 4679999999999999999999999999999999 99999998 9999999999999999999963 378999
Q ss_pred EEeCCCCCc-cEEEeccCCCCC-CeeEEEEeeccCceeeeecchhHHHHHHHhhCCCCCCCeEEE-EcCCCccccccccc
Q psy2094 100 SVHNDDTYT-PFVLNMADFNRS-GSVHTIRMYEKDLVHAFDCGDAASEWFSRFLLGKEDPDIRLG-YDCDEQRKLNGTIY 176 (341)
Q Consensus 100 ~~p~~~~~~-~l~v~l~~~~~~-~~~~~~v~~~~~~~~~~d~G~~~~~wlS~~Lg~~~~~~~rL~-~~~~~~~r~~~~~~ 176 (341)
++| +|+ ++.|++++...+ ....++| |++.+.++|||+++++|||++|| .+|||+ +.+... |....-.
T Consensus 587 ~~~---~~~~~l~v~l~~~~~~~~~~~v~v--~~~~~~~~~~g~~~~~w~S~~lg----~~~~Lv~~~~~~~-r~~~~~~ 656 (805)
T PLN02724 587 RAP---RCDHKLEIPLESDSQHEESGEVIL--CGNRAESMSYGTEINEWFTNALG----RRCTLVRKSSSNT-RVCRNRN 656 (805)
T ss_pred EcC---CCCccEEEeCCCcccccccceeEE--eCCcceeEecchhHHHHHHHHhC----CceEEEEeCCccc-ccccccc
Confidence 999 776 799999876543 3567888 99999999999999999999999 789999 654432 2221100
Q ss_pred cccccccCCCCCCCCcccccCcceeEEeehhhHHHHHHHhccc---CCccccccceeecEEEecCCCCCCCCccEEEECC
Q psy2094 177 ERYRHHYGDHITNEDMGKYAYLASYMLMNEASVKDLNERLQLK---GETEVSIHNFRGNIILSTDQAYEEDNWDWVRLNE 253 (341)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~f~D~~p~~lis~aSl~~L~~~l~~~---~~~~v~~~RFRpNIvI~g~~pf~Ed~W~~l~IG~ 253 (341)
. .. ..........+|+|.+||||+|++||++||++++.. +..+++++||||||||+|++||+||.|++|+||+
T Consensus 657 -~-~~--~~~~~~~~~~~faD~~p~llis~aSl~~Ln~~l~~~~~~~~~~v~~~RFRpNiVv~g~~~f~ED~W~~l~IG~ 732 (805)
T PLN02724 657 -P-SH--SPCGDDESRLSFANEGQFLLISEASVEDLNRRLATGQEDAKIRLDPTRFRPNLVVSGGEAYAEDEWQSLSIGD 732 (805)
T ss_pred -c-cc--ccccCcCCceeecCCCceEEecHHHHHHHHHHhccccccccCCCcHHHccceEEECCCCCccccCceEEEECC
Confidence 0 00 000012235899999999999999999999999731 1237999999999999999999999999999999
Q ss_pred cEEEEEEeecCCceeeeecCCCCcCCCCCchHHHHHhhcCCCcchhccccCCCCeeeeeeee----cCCCEEeeCCeEEE
Q psy2094 254 DIILRGMKPCTRCTMTCLDPETGQKNLRTEPLKTLRSYRGPIGEKARALEKGSPRLGLYCGL----YSRGTVQKGDPVYV 329 (341)
Q Consensus 254 ~~~~~v~~pc~RC~~~~vdp~tg~~~~~~epl~tL~~~R~~~~~~~~~~~~~~~~fGv~~~v----~~~G~I~VGD~V~v 329 (341)
+.|++++||+||+||||||+||+++.+.|||+||++||+.+ +++.||+|+.. ...|.|+|||.|.+
T Consensus 733 -~~~~~~~~C~RC~~~tvDp~tg~~~~~~epl~tL~~~R~~~---------~~~~FG~~~~~~~~~~~~~~i~vGd~v~~ 802 (805)
T PLN02724 733 -AEFTVLGGCNRCQMINIDQETGLVNPSNEPLATLASYRRVK---------GKILFGILLRYEISDKRDQWIAVGSRVNP 802 (805)
T ss_pred -EEEEEecccCCCCCCcCCcccCccCCCCChHHHHHHHhCcC---------CCCCccceeeccccCCCCcEEEeCCEEEe
Confidence 99999999999999999999999765679999999999743 68999999976 46689999999977
Q ss_pred e
Q psy2094 330 A 330 (341)
Q Consensus 330 ~ 330 (341)
.
T Consensus 803 ~ 803 (805)
T PLN02724 803 R 803 (805)
T ss_pred c
Confidence 5
|
|
| >KOG2362|consensus | Back alignment and domain information |
|---|
| >COG3217 Uncharacterized Fe-S protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF03476 MOSC_N: MOSC N-terminal beta barrel domain; InterPro: IPR005303 This domain is found to the N terminus of MOSC domain (IPR005302 from INTERPRO) | Back alignment and domain information |
|---|
| >PF03473 MOSC: MOSC domain; InterPro: IPR005302 Molybdenum cofactor (MOCO) sulphurases [] catalyse the insertion of a terminal sulphur ligand into the molybdenum cofactor, thereby converting the oxo form of MOCO to a sulphurylated form | Back alignment and domain information |
|---|
| >KOG2142|consensus | Back alignment and domain information |
|---|
| >PRK14499 molybdenum cofactor biosynthesis protein MoaC/MOSC-domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK11536 6-N-hydroxylaminopurine resistance protein; Provisional | Back alignment and domain information |
|---|
| >COG2258 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 341 | |||
| 2exn_A | 136 | Hypothetical protein BOR11; beta barrel containing | 7e-14 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 7e-04 |
| >2exn_A Hypothetical protein BOR11; beta barrel containing fold, autostructure, autoassign, structure, structural genomics, PSI; NMR {Bordetella bronchiseptica} SCOP: b.165.1.1 Length = 136 | Back alignment and structure |
|---|
Score = 66.8 bits (163), Expect = 7e-14
Identities = 24/160 (15%), Positives = 49/160 (30%), Gaps = 25/160 (15%)
Query: 25 VTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNRL 84
++ P+ + +A + +L+ N G +++ RL
Sbjct: 1 MSTTAYQPIAECGATTQSEAA--------------AYQKRWLVAN-DAGQWLNRDLCPRL 45
Query: 85 VLVKVTALDKDLIQFSVHNDDTYT-PFVLNMADFNRSGSVHTIRMYEKDLVHAFDCGDAA 143
V V L + P + D + + + E+ V D G+ A
Sbjct: 46 AEVSVE-LRMGYLVLKAPGMLRLDIPLDVIEDDDSVRYQM---LVGEQT-VDVVDEGELA 100
Query: 144 SEWFSRFLLGKEDPDIRLGYDCDEQRKLNGTIYERYRHHY 183
+ W S G R+ + ++ E + HH+
Sbjct: 101 AAWISNH-AGV---PCRILKVHPDMAEVRWPSLEHHHHHH 136
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| 2exn_A | 136 | Hypothetical protein BOR11; beta barrel containing | 99.97 | |
| 1oru_A | 195 | YUAD protein; structural genomics, cytosolic hypot | 99.65 | |
| 1o65_A | 246 | Hypothetical protein YIIM; structural genomics, un | 99.27 | |
| 1oru_A | 195 | YUAD protein; structural genomics, cytosolic hypot | 92.3 |
| >2exn_A Hypothetical protein BOR11; beta barrel containing fold, autostructure, autoassign, structure, structural genomics, PSI; NMR {Bordetella bronchiseptica} SCOP: b.165.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-31 Score=221.71 Aligned_cols=118 Identities=15% Similarity=0.148 Sum_probs=106.8
Q ss_pred EEeEEeccccccCceeeeeEEecccCcccccCCCCCCCceEEEEEcCCCeeEeecCCCceeeEEEEEcCCCeEEEEEeCC
Q psy2094 25 VTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNRLVLVKVTALDKDLIQFSVHND 104 (341)
Q Consensus 25 V~~L~iyPVKS~~g~~v~~~~l~~~Gl~~D~~~~~l~DR~f~l~d~~~g~~lt~r~~p~L~~i~~~~~~~~~L~l~~p~~ 104 (341)
|++|||||||||+|++|+++. .+| |+|||+|. +|+|+|||++|+|++|++.+++ +.|+|++|
T Consensus 1 v~~L~iYPIKSc~g~~l~~a~------~~D--------R~wmlvd~-~G~~lt~r~~P~Lali~~~~~~-~~L~l~~p-- 62 (136)
T 2exn_A 1 MSTTAYQPIAECGATTQSEAA------AYQ--------KRWLVAND-AGQWLNRDLCPRLAEVSVELRM-GYLVLKAP-- 62 (136)
T ss_dssp CCCCCEEEETTTEEECCGGGG------GTC--------CSEEEEET-TSCEECTTTCGGGGCCEEEECS-SEEEEECS--
T ss_pred CceEEEeccccCCceecCccC------ccC--------CcEEEEeC-CCCEEEccCCccccEEEEEecC-CEEEEEeC--
Confidence 578999999999999999875 778 99999998 9999999999999999999998 79999999
Q ss_pred CCCccEEEeccCCCC--CCeeEEEEeeccCceeeeecchhHHHHHHHhhCCCCCCCeEEE-EcCCC
Q psy2094 105 DTYTPFVLNMADFNR--SGSVHTIRMYEKDLVHAFDCGDAASEWFSRFLLGKEDPDIRLG-YDCDE 167 (341)
Q Consensus 105 ~~~~~l~v~l~~~~~--~~~~~~~v~~~~~~~~~~d~G~~~~~wlS~~Lg~~~~~~~rL~-~~~~~ 167 (341)
+++++.+++++... ...+.++| |++.+.++|||+++++|||+||| .+|||+ +.++.
T Consensus 63 -g~~~l~vpl~~~~~~~~~~~~v~v--w~~~~~a~d~g~~~~~W~S~~Lg----~p~rLv~~~~~~ 121 (136)
T 2exn_A 63 -GMLRLDIPLDVIEDDDSVRYQMLV--GEQTVDVVDEGELAAAWISNHAG----VPCRILKVHPDM 121 (136)
T ss_dssp -SSCEEEEESSCCCSSCSCEEEEEE--TTEEEEEEECCHHHHHHHHHHTC----SSEEEEEECTTT
T ss_pred -CCceEEEECCCccccccCceeEEE--eCCcceeEeccHHHHHHHHHHhC----CCeEEEEcCCCC
Confidence 99999999987641 14668899 99999999999999999999999 899999 65543
|
| >1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2 | Back alignment and structure |
|---|
| >1o65_A Hypothetical protein YIIM; structural genomics, unknown function; 2.33A {Escherichia coli} SCOP: b.58.1.2 PDB: 1o67_A | Back alignment and structure |
|---|
| >1oru_A YUAD protein; structural genomics, cytosolic hypothetical protein, PSI, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.80A {Bacillus subtilis} SCOP: b.58.1.2 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 341 | ||||
| d2exna1 | 128 | b.165.1.1 (A:1-128) Hypothetical protein BB0938 {B | 9e-10 | |
| d1orua_ | 182 | b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus | 6e-06 |
| >d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]} Length = 128 | Back information, alignment and structure |
|---|
class: All beta proteins fold: MOSC N-terminal domain-like superfamily: MOSC N-terminal domain-like family: MOSC N-terminal domain-like domain: Hypothetical protein BB0938 species: Bordetella bronchiseptica [TaxId: 518]
Score = 53.8 bits (129), Expect = 9e-10
Identities = 21/141 (14%), Positives = 41/141 (29%), Gaps = 24/141 (17%)
Query: 25 VTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNRL 84
++ P+ + +A + +L+ N G +++ RL
Sbjct: 1 MSTTAYQPIAECGATTQSEAA--------------AYQKRWLVAN-DAGQWLNRDLCPRL 45
Query: 85 VLVKVTALDKDLIQFSVHNDDTYTPFVLNMADFNRSGSVHTIRMYEKDLVHAFDCGDAAS 144
V V L+ + P + D + + V D G+ A+
Sbjct: 46 AEVSVELRMGYLVLKAPGMLRLDIPLDVIEDDDSVRYQMLVGE----QTVDVVDEGELAA 101
Query: 145 EWFSRFL-----LGKEDPDIR 160
W S + K PD+
Sbjct: 102 AWISNHAGVPCRILKVHPDMA 122
|
| >d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis [TaxId: 1423]} Length = 182 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 341 | |||
| d2exna1 | 128 | Hypothetical protein BB0938 {Bordetella bronchisep | 99.97 | |
| d1orua_ | 182 | Hypothetical protein YuaD {Bacillus subtilis [TaxI | 99.44 | |
| d1o65a_ | 233 | Hypothetical protein YiiM {Escherichia coli [TaxId | 98.86 | |
| d1orua_ | 182 | Hypothetical protein YuaD {Bacillus subtilis [TaxI | 83.22 |
| >d2exna1 b.165.1.1 (A:1-128) Hypothetical protein BB0938 {Bordetella bronchiseptica [TaxId: 518]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: MOSC N-terminal domain-like superfamily: MOSC N-terminal domain-like family: MOSC N-terminal domain-like domain: Hypothetical protein BB0938 species: Bordetella bronchiseptica [TaxId: 518]
Probab=99.97 E-value=1.9e-32 Score=227.32 Aligned_cols=118 Identities=14% Similarity=0.141 Sum_probs=107.0
Q ss_pred EEeEEeccccccCceeeeeEEecccCcccccCCCCCCCceEEEEEcCCCeeEeecCCCceeeEEEEEcCCCeEEEEEeCC
Q psy2094 25 VTEINIYPLKSGYYLSVEKAFCDFKGLSRIGQGYPLSDRCFLLFNRSKGTYISNIAHNRLVLVKVTALDKDLIQFSVHND 104 (341)
Q Consensus 25 V~~L~iyPVKS~~g~~v~~~~l~~~Gl~~D~~~~~l~DR~f~l~d~~~g~~lt~r~~p~L~~i~~~~~~~~~L~l~~p~~ 104 (341)
|+.|++||||||+|++++ .||++| |+|||+|+ +|+|+|||++|+|++|++.+++ +.|+|++|
T Consensus 1 ~s~~~~~PIKsc~g~~~~------~gl~~D--------R~wmlvd~-~G~fltqR~~P~La~i~~~~~~-~~L~l~~p-- 62 (128)
T d2exna1 1 MSTTAYQPIAECGATTQS------EAAAYQ--------KRWLVAND-AGQWLNRDLCPRLAEVSVELRM-GYLVLKAP-- 62 (128)
T ss_dssp CCCCCEEEETTTEEECCG------GGGGTC--------CSEEEEET-TSCEECTTTCGGGGCCEEEECS-SEEEEECS--
T ss_pred CcceeeecccccCCcccc------chhhhc--------eeEEEECC-CCCEEEcccCCcEEEEEEEEeC-CEEEEEec--
Confidence 578999999999999985 599999 99999997 8999999999999999999998 89999999
Q ss_pred CCCccEEEeccCCCCC--CeeEEEEeeccCceeeeecchhHHHHHHHhhCCCCCCCeEEE-EcCCC
Q psy2094 105 DTYTPFVLNMADFNRS--GSVHTIRMYEKDLVHAFDCGDAASEWFSRFLLGKEDPDIRLG-YDCDE 167 (341)
Q Consensus 105 ~~~~~l~v~l~~~~~~--~~~~~~v~~~~~~~~~~d~G~~~~~wlS~~Lg~~~~~~~rL~-~~~~~ 167 (341)
+|+++.|++.....+ ....+.+ |++.+.++|||+++++|||++|| .+|||+ +.|+.
T Consensus 63 -g~~~l~vpL~~~~~~~~~~~~v~v--w~~~~~a~~~g~~~~~WfS~~LG----~~~rLv~~~p~~ 121 (128)
T d2exna1 63 -GMLRLDIPLDVIEDDDSVRYQMLV--GEQTVDVVDEGELAAAWISNHAG----VPCRILKVHPDM 121 (128)
T ss_dssp -SSCEEEEESSCCCSSCSCEEEEEE--TTEEEEEEECCHHHHHHHHHHTC----SSEEEEEECTTT
T ss_pred -CCCceeeccccccccccceEEEEE--cCCeeEEEECChHHHHHHHHHhC----CceEEEEECCCC
Confidence 999999998765443 3567888 99999999999999999999999 899999 77764
|
| >d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1o65a_ b.58.1.2 (A:) Hypothetical protein YiiM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1orua_ b.58.1.2 (A:) Hypothetical protein YuaD {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|