Psyllid ID: psy2097

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-
Protein Sequence
MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPSHRGQSLGTTGTGI
Secondary Structure (PSIPRED)
cccccccHHHHHHHHcccccccEEEEccccccccccEEcccHHHHHHHHHHccccccEEEEEEcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHcccccEEEEEccccccccHHHcEEcccccccccccccccc
Coil and Loop (DISEMBL)
MLDGVVNDAVEARALGlninhidiysaswgpeddgrtvdgpgpllmvqategfprshlyfiepgvtkwsiedrivnpshrgqslgttgtgi
Flexible Loop (DISEMBL)
MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDrivnpshrgqslgttgtgi
Low Complexity Region (SEG)
MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPSHRGQSLGTTGTGI
Disordered region (IsUnstruct)
*****VNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIV****************
Disordered Region (DISOPRED)
*LDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIED*******************
Disordered Region (DISEMBL)
MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPSHR***********
Disordered Region (DISPRO)
***GVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNP**************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPSHRGQSLGTTGTGI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	91	2.2.26 [Sep-21-2011]
P30432	1679	Furin-like protease 2 OS=	yes	N/A	0.483	0.026	0.840	3e-16
P29119	783	Furin-1 OS=Xenopus laevis	N/A	N/A	0.560	0.065	0.727	6e-15
P51559	943	Endoprotease bli-4 OS=Cae	yes	N/A	0.560	0.054	0.690	7e-15
P09958	794	Furin OS=Homo sapiens GN=	yes	N/A	0.560	0.064	0.727	2e-14
P23188	793	Furin OS=Mus musculus GN=	yes	N/A	0.560	0.064	0.727	2e-14
P23377	793	Furin OS=Rattus norvegicu	yes	N/A	0.560	0.064	0.727	2e-14
Q28193	797	Furin OS=Bos taurus GN=FU	yes	N/A	0.560	0.063	0.727	2e-14
P26016	1269	Furin-like protease 1, is	no	N/A	0.483	0.034	0.795	7e-14
P30430	1101	Furin-like protease 1, is	no	N/A	0.483	0.039	0.795	8e-14
P29122	969	Proprotein convertase sub	no	N/A	0.483	0.045	0.727	1e-13

>sp|P30432|FUR2_DROME Furin-like protease 2 OS=Drosophila melanogaster GN=Fur2 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/44 (84%), Positives = 39/44 (88%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VND VEA+AL LN +HIDIYSASWGPEDDG TVDGPGPL
Sbjct: 488 MLDGKVNDVVEAQALSLNPSHIDIYSASWGPEDDGSTVDGPGPL 531

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.
Drosophila melanogaster (taxid: 7227)
EC: 3EC: .EC: 4EC: .EC: 2EC: 1EC: .EC: 7EC: 5

>sp|P29119|FURI1_XENLA Furin-1 OS=Xenopus laevis GN=furin PE=2 SV=1

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 224 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPAKL----AEEAFYR 274

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Xenopus laevis (taxid: 8355)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P51559|BLI4_CAEEL Endoprotease bli-4 OS=Caenorhabditis elegans GN=bli-4 PE=2 SV=2

 Score = 79.0 bits (193), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/55 (69%), Positives = 43/55 (78%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V+D+VEA +L LN +HIDIYSASWGPEDDG+T DGPGPL    A E F R
Sbjct: 273 MLDGAVSDSVEAASLSLNQDHIDIYSASWGPEDDGKTFDGPGPL----AREAFYR 323

The Kex2/subtilisin-like proteinase activity of this enzyme is required for the normal production of adult cuticle. There is functional redundancy between the isoforms. Vital for embryonic and larval development.

Caenorhabditis elegans (taxid: 6239)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

>sp|P09958|FURIN_HUMAN Furin OS=Homo sapiens GN=FURIN PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL----AEEAFFR 276

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P23188|FURIN_MOUSE Furin OS=Mus musculus GN=Furin PE=1 SV=2

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL----AEEAFFR 276

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P23377|FURIN_RAT Furin OS=Rattus norvegicus GN=Furin PE=1 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL----AEEAFFR 276

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|Q28193|FURIN_BOVIN Furin OS=Bos taurus GN=FURIN PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPAHL----AEEAFFR 276

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P26016|FUR11_DROME Furin-like protease 1, isoforms 1/1-X/2 OS=Drosophila melanogaster GN=Fur1 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 38/44 (86%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG V DAVEAR+L LN  HIDIYSASWGP+DDG+TVDGPG L
Sbjct: 445 MLDGDVTDAVEARSLSLNPQHIDIYSASWGPDDDGKTVDGPGEL 488

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P30430|FUR1C_DROME Furin-like protease 1, isoform 1-CRR OS=Drosophila melanogaster GN=Fur1 PE=2 SV=2

 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 35/44 (79%), Positives = 38/44 (86%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG V DAVEAR+L LN  HIDIYSASWGP+DDG+TVDGPG L
Sbjct: 445 MLDGDVTDAVEARSLSLNPQHIDIYSASWGPDDDGKTVDGPGEL 488

Furin is likely to represent the ubiquitous endoprotease activity within constitutive secretory pathways and capable of cleavage at the RX(K/R)R consensus motif.

Drosophila melanogaster (taxid: 7227)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: 7

EC: 5

>sp|P29122|PCSK6_HUMAN Proprotein convertase subtilisin/kexin type 6 OS=Homo sapiens GN=PCSK6 PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/44 (72%), Positives = 38/44 (86%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG V D VEA++LG+  N+IDIYSASWGP+DDG+TVDGPG L
Sbjct: 278 MLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRL 321

Likely to represent an endoprotease activity within the constitutive secretory pathway, with unique restricted distribution in both neuroendocrine and non-neuroendocrine tissues and capable of cleavage at the RX(K/R)R consensus motif.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 4

EC: .

EC: 2

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
328711436	1335	PREDICTED: furin-like protease 2-like [A	0.483	0.032	0.954	2e-18
357608164	1300	Endoprotease FURIN [Danaus plexippus]	0.483	0.033	0.931	9e-18
270002486	1361	hypothetical protein TcasGA2_TC004554 [T	0.483	0.032	0.931	1e-17
91076308	1231	PREDICTED: similar to Endoprotease FURIN	0.483	0.035	0.931	1e-17
1167860	1299	Endoprotease FURIN [Spodoptera frugiperd	0.483	0.033	0.931	1e-17
47681489	949	furin-like convertase [Trichoplusia ni]	0.483	0.046	0.931	3e-17
345493157	1282	PREDICTED: furin-like protease 2-like, p	0.483	0.034	0.909	5e-17
383854126	1297	PREDICTED: furin-like protease 2-like [M	0.483	0.033	0.909	5e-17
380013082	1325	PREDICTED: furin-like protease 2-like [A	0.483	0.033	0.909	5e-17
340720987	1307	PREDICTED: furin-like protease 2-like [B	0.483	0.033	0.909	5e-17

>gi|328711436|ref|XP_001943296.2| PREDICTED: furin-like protease 2-like [Acyrthosiphon pisum]

 Score = 96.3 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/44 (95%), Positives = 43/44 (97%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VNDAVEARALGLNINHIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 265 MLDGTVNDAVEARALGLNINHIDIYSASWGPEDDGKTVDGPGPL 308

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|357608164|gb|EHJ65855.1| Endoprotease FURIN [Danaus plexippus]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 41/44 (93%), Positives = 43/44 (97%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDGVVNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 250 MLDGVVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 293

Source: Danaus plexippus

Species: Danaus plexippus

Genus: Danaus

Family: Nymphalidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|270002486|gb|EEZ98933.1| hypothetical protein TcasGA2_TC004554 [Tribolium castaneum]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDGVVNDAVEARALGLN  HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 401 MLDGVVNDAVEARALGLNPEHIDIYSASWGPEDDGKTVDGPGPL 444

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91076308|ref|XP_969307.1| PREDICTED: similar to Endoprotease FURIN [Tribolium castaneum]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/44 (93%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDGVVNDAVEARALGLN  HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 271 MLDGVVNDAVEARALGLNPEHIDIYSASWGPEDDGKTVDGPGPL 314

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|1167860|emb|CAA93116.1| Endoprotease FURIN [Spodoptera frugiperda]

 Score = 93.6 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/44 (93%), Positives = 43/44 (97%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDGVVNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 250 MLDGVVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 293

Source: Spodoptera frugiperda

Species: Spodoptera frugiperda

Genus: Spodoptera

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47681489|gb|AAT37510.1| furin-like convertase [Trichoplusia ni]

 Score = 92.4 bits (228), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/44 (93%), Positives = 43/44 (97%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDGVVNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 250 MLDGVVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 293

Source: Trichoplusia ni

Species: Trichoplusia ni

Genus: Trichoplusia

Family: Noctuidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493157|ref|XP_001601381.2| PREDICTED: furin-like protease 2-like, partial [Nasonia vitripennis]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/44 (90%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 206 MLDGPVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 249

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854126|ref|XP_003702573.1| PREDICTED: furin-like protease 2-like [Megachile rotundata]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/44 (90%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 223 MLDGPVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 266

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380013082|ref|XP_003690599.1| PREDICTED: furin-like protease 2-like [Apis florea]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/44 (90%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 268 MLDGPVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 311

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340720987|ref|XP_003398909.1| PREDICTED: furin-like protease 2-like [Bombus terrestris]

 Score = 91.7 bits (226), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/44 (90%), Positives = 42/44 (95%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           MLDG VNDAVEARALGLN +HIDIYSASWGPEDDG+TVDGPGPL
Sbjct: 270 MLDGPVNDAVEARALGLNPDHIDIYSASWGPEDDGKTVDGPGPL 313

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	91
FB|FBgn0004598	1679	Fur2 "Furin 2" [Drosophila mel	0.483	0.026	0.840	4.2e-14
UNIPROTKB|G8JYA5	666	bli-4 "Protein BLI-4, isoform	0.560	0.076	0.690	8.5e-14
UNIPROTKB|I3L8I1	134	PCSK6 "Uncharacterized protein	0.549	0.373	0.686	1.3e-13
UNIPROTKB|E2RSE6	792	FURIN "Uncharacterized protein	0.483	0.055	0.818	1.4e-13
WB|WBGene00000254	943	bli-4 [Caenorhabditis elegans	0.560	0.054	0.690	1.4e-13
UNIPROTKB|P51559	943	bli-4 "Endoprotease bli-4" [Ca	0.560	0.054	0.690	1.4e-13
MGI|MGI:97513	793	Furin "furin (paired basic ami	0.483	0.055	0.818	1.4e-13
RGD|3274	793	Furin "furin (paired basic ami	0.483	0.055	0.818	1.4e-13
UNIPROTKB|P23377	793	Furin "Furin" [Rattus norvegic	0.483	0.055	0.818	1.4e-13
UNIPROTKB|P09958	794	FURIN "Furin" [Homo sapiens (t	0.483	0.055	0.818	1.4e-13

FB|FBgn0004598 Fur2 "Furin 2" [Drosophila melanogaster (taxid:7227)]

 Score = 197 (74.4 bits), Expect = 4.2e-14, P = 4.2e-14
 Identities = 37/44 (84%), Positives = 39/44 (88%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG VND VEA+AL LN +HIDIYSASWGPEDDG TVDGPGPL
Sbjct:   488 MLDGKVNDVVEAQALSLNPSHIDIYSASWGPEDDGSTVDGPGPL 531

GO:0004252 "serine-type endopeptidase activity" evidence=IGI;NAS;IDA

GO:0005886 "plasma membrane" evidence=ISS

GO:0006508 "proteolysis" evidence=IEA;NAS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016485 "protein processing" evidence=IBA

UNIPROTKB|G8JYA5 bli-4 "Protein BLI-4, isoform f" [Caenorhabditis elegans (taxid:6239)]

 Score = 189 (71.6 bits), Expect = 8.5e-14, P = 8.5e-14
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
             MLDG V+D+VEA +L LN +HIDIYSASWGPEDDG+T DGPGPL    A E F R
Sbjct:   273 MLDGAVSDSVEAASLSLNQDHIDIYSASWGPEDDGKTFDGPGPL----AREAFYR 323

GO:0004252 "serine-type endopeptidase activity" evidence=IBA

UNIPROTKB|I3L8I1 PCSK6 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 177 (67.4 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 35/51 (68%), Positives = 41/51 (80%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATE 51
             MLDG V D VEA++LG+  N+IDIYSASWGP+DDG+TVDGPG L   QA E
Sbjct:     1 MLDGDVTDVVEAKSLGIRPNYIDIYSASWGPDDDGKTVDGPGRLAK-QAFE 50

GO:0048406 "nerve growth factor binding" evidence=IEA

GO:0043499 "eukaryotic cell surface binding" evidence=IEA

GO:0032940 "secretion by cell" evidence=IEA

GO:0032902 "nerve growth factor production" evidence=IEA

GO:0031012 "extracellular matrix" evidence=IEA

GO:0016486 "peptide hormone processing" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0009100 "glycoprotein metabolic process" evidence=IEA

GO:0008201 "heparin binding" evidence=IEA

GO:0007368 "determination of left/right symmetry" evidence=IEA

GO:0007354 "zygotic determination of anterior/posterior axis, embryo" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|E2RSE6 FURIN "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L
Sbjct:   226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL 269

GO:0048406 "nerve growth factor binding" evidence=IEA

GO:0045121 "membrane raft" evidence=IEA

GO:0043043 "peptide biosynthetic process" evidence=IEA

GO:0042277 "peptide binding" evidence=IEA

GO:0032940 "secretion by cell" evidence=IEA

GO:0032911 "negative regulation of transforming growth factor beta1 production" evidence=IEA

GO:0032902 "nerve growth factor production" evidence=IEA

GO:0032804 "negative regulation of low-density lipoprotein particle receptor catabolic process" evidence=IEA

GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA

GO:0019067 "viral assembly, maturation, egress, and release" evidence=IEA

GO:0016486 "peptide hormone processing" evidence=IEA

GO:0009986 "cell surface" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0008283 "cell proliferation" evidence=IEA

GO:0006465 "signal peptide processing" evidence=IEA

GO:0005802 "trans-Golgi network" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0002020 "protease binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004252 "serine-type endopeptidase activity" evidence=IEA

WB|WBGene00000254 bli-4 [Caenorhabditis elegans (taxid:6239)]

 Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
             MLDG V+D+VEA +L LN +HIDIYSASWGPEDDG+T DGPGPL    A E F R
Sbjct:   273 MLDGAVSDSVEAASLSLNQDHIDIYSASWGPEDDGKTFDGPGPL----AREAFYR 323

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;ISS

GO:0006508 "proteolysis" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040002 "collagen and cuticulin-based cuticle development" evidence=IMP

GO:0005634 "nucleus" evidence=IDA

UNIPROTKB|P51559 bli-4 "Endoprotease bli-4" [Caenorhabditis elegans (taxid:6239)]

 Score = 189 (71.6 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 38/55 (69%), Positives = 43/55 (78%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
             MLDG V+D+VEA +L LN +HIDIYSASWGPEDDG+T DGPGPL    A E F R
Sbjct:   273 MLDGAVSDSVEAASLSLNQDHIDIYSASWGPEDDGKTFDGPGPL----AREAFYR 323

GO:0004252 "serine-type endopeptidase activity" evidence=IBA;NAS

GO:0016021 "integral to membrane" evidence=NAS

MGI|MGI:97513 Furin "furin (paired basic amino acid cleaving enzyme)" [Mus musculus (taxid:10090)]

 Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L
Sbjct:   226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL 269

GO:0002020 "protease binding" evidence=ISO

GO:0004175 "endopeptidase activity" evidence=ISO

GO:0004252 "serine-type endopeptidase activity" evidence=ISO;IBA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005615 "extracellular space" evidence=IBA

GO:0005769 "early endosome" evidence=TAS

GO:0005789 "endoplasmic reticulum membrane" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IBA

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0006465 "signal peptide processing" evidence=ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=ISO

GO:0008236 "serine-type peptidase activity" evidence=IEA

GO:0008283 "cell proliferation" evidence=ISO

GO:0009966 "regulation of signal transduction" evidence=IDA

GO:0009986 "cell surface" evidence=ISO

GO:0012510 "trans-Golgi network transport vesicle membrane" evidence=TAS

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=TAS

GO:0016485 "protein processing" evidence=ISO;IDA

GO:0016486 "peptide hormone processing" evidence=ISO

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030140 "trans-Golgi network transport vesicle" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=ISO

GO:0031985 "Golgi cisterna" evidence=ISO

GO:0032804 "negative regulation of low-density lipoprotein particle receptor catabolic process" evidence=ISO

GO:0032902 "nerve growth factor production" evidence=ISO

GO:0032911 "negative regulation of transforming growth factor beta1 production" evidence=ISO

GO:0032940 "secretion by cell" evidence=ISO

GO:0042176 "regulation of protein catabolic process" evidence=ISO

GO:0042277 "peptide binding" evidence=ISO

GO:0043043 "peptide biosynthetic process" evidence=ISO

GO:0045121 "membrane raft" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048406 "nerve growth factor binding" evidence=ISO

GO:0052548 "regulation of endopeptidase activity" evidence=ISO

RGD|3274 Furin "furin (paired basic amino acid cleaving enzyme)" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L
Sbjct:   226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL 269

GO:0002020 "protease binding" evidence=IEA;ISO

GO:0004175 "endopeptidase activity" evidence=ISO

GO:0004252 "serine-type endopeptidase activity" evidence=IEA;ISO;IMP

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISO

GO:0005615 "extracellular space" evidence=ISO;IBA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IDA

GO:0006465 "signal peptide processing" evidence=IEA;ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008233 "peptidase activity" evidence=ISO

GO:0008283 "cell proliferation" evidence=IEA;ISO

GO:0009966 "regulation of signal transduction" evidence=IEA;ISO

GO:0009986 "cell surface" evidence=IEA;ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0016485 "protein processing" evidence=ISO;IDA;IMP

GO:0016486 "peptide hormone processing" evidence=IEA;ISO

GO:0019067 "viral assembly, maturation, egress, and release" evidence=IEA;ISO

GO:0030140 "trans-Golgi network transport vesicle" evidence=IEA;ISO

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0030511 "positive regulation of transforming growth factor beta receptor signaling pathway" evidence=IMP

GO:0031985 "Golgi cisterna" evidence=IDA

GO:0032804 "negative regulation of low-density lipoprotein particle receptor catabolic process" evidence=IEA;ISO

GO:0032902 "nerve growth factor production" evidence=IEA;ISO

GO:0032911 "negative regulation of transforming growth factor beta1 production" evidence=IEA;ISO

GO:0032940 "secretion by cell" evidence=IEA;ISO

GO:0042176 "regulation of protein catabolic process" evidence=ISO

GO:0042277 "peptide binding" evidence=IEA;ISO

GO:0043043 "peptide biosynthetic process" evidence=IEA;ISO

GO:0045121 "membrane raft" evidence=IEA;ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0048406 "nerve growth factor binding" evidence=IEA;ISO

GO:0052548 "regulation of endopeptidase activity" evidence=ISO

GO:0032904 "negative regulation of nerve growth factor production" evidence=ISO

UNIPROTKB|P23377 Furin "Furin" [Rattus norvegicus (taxid:10116)]

 Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L
Sbjct:   226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL 269

GO:0006508 "proteolysis" evidence=IEA

UNIPROTKB|P09958 FURIN "Furin" [Homo sapiens (taxid:9606)]

 Score = 188 (71.2 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)

Query:     1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
             MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L
Sbjct:   226 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL 269

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0008233 "peptidase activity" evidence=IDA

GO:0016485 "protein processing" evidence=IMP;IDA

GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA

GO:0006465 "signal peptide processing" evidence=IDA

GO:0032804 "negative regulation of low-density lipoprotein particle receptor catabolic process" evidence=IDA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0005796 "Golgi lumen" evidence=TAS

GO:0006508 "proteolysis" evidence=TAS

GO:0007179 "transforming growth factor beta receptor signaling pathway" evidence=TAS

GO:0007219 "Notch signaling pathway" evidence=TAS

GO:0017187 "peptidyl-glutamic acid carboxylation" evidence=TAS

GO:0022617 "extracellular matrix disassembly" evidence=TAS

GO:0030198 "extracellular matrix organization" evidence=TAS

GO:0032455 "nerve growth factor processing" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0048011 "neurotrophin TRK receptor signaling pathway" evidence=TAS

GO:0019067 "viral assembly, maturation, egress, and release" evidence=IEP

GO:0042277 "peptide binding" evidence=IDA

GO:0004175 "endopeptidase activity" evidence=IDA

GO:0016486 "peptide hormone processing" evidence=IDA

GO:0043043 "peptide biosynthetic process" evidence=IDA

GO:0008283 "cell proliferation" evidence=IMP

GO:0032911 "negative regulation of transforming growth factor beta1 production" evidence=IMP

GO:0042176 "regulation of protein catabolic process" evidence=IMP

GO:0032902 "nerve growth factor production" evidence=IDA

GO:0048406 "nerve growth factor binding" evidence=IDA

GO:0004252 "serine-type endopeptidase activity" evidence=IDA

GO:0032940 "secretion by cell" evidence=IDA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IDA

GO:0005615 "extracellular space" evidence=IDA

GO:0032904 "negative regulation of nerve growth factor production" evidence=IDA

GO:0052548 "regulation of endopeptidase activity" evidence=IDA

GO:0002020 "protease binding" evidence=IPI

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0009986 "cell surface" evidence=IDA

GO:0045121 "membrane raft" evidence=IDA

GO:0051044 "positive regulation of membrane protein ectodomain proteolysis" evidence=IC

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P23188	FURIN_MOUSE	3, ., 4, ., 2, 1, ., 7, 5	0.7272	0.5604	0.0643	yes	N/A
P51559	BLI4_CAEEL	3, ., 4, ., 2, 1, ., -	0.6909	0.5604	0.0540	yes	N/A
Q09175	KRP1_SCHPO	3, ., 4, ., 2, 1, ., -	0.5227	0.4395	0.0564	yes	N/A
Q28193	FURIN_BOVIN	3, ., 4, ., 2, 1, ., 7, 5	0.7272	0.5604	0.0639	yes	N/A
P23377	FURIN_RAT	3, ., 4, ., 2, 1, ., 7, 5	0.7272	0.5604	0.0643	yes	N/A
P09958	FURIN_HUMAN	3, ., 4, ., 2, 1, ., 7, 5	0.7272	0.5604	0.0642	yes	N/A
P30432	FUR2_DROME	3, ., 4, ., 2, 1, ., 7, 5	0.8409	0.4835	0.0262	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	91
cd04059	297	cd04059, Peptidases_S8_Protein_convertases_Kexins_	2e-18

>gnl|CDD|173789 cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases

 Score = 76.4 bits (189), Expect = 2e-18
 Identities = 33/46 (71%), Positives = 38/46 (82%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLM 46
           MLDG V D VEA +LGLN ++IDIYS SWGP+DDG+TVDGPGPL  
Sbjct: 118 MLDGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGPGPLAQ 163

Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation. Length = 297

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	91
KOG3526|consensus	629		99.88
KOG3525|consensus	431		99.55
cd04059	297	Peptidases_S8_Protein_convertases_Kexins_Furin-lik	98.11
cd07490	254	Peptidases_S8_6 Peptidase S8 family domain, unchar	96.77
cd07487	264	Peptidases_S8_1 Peptidase S8 family domain, unchar	96.64
cd07481	264	Peptidases_S8_BacillopeptidaseF-like Peptidase S8	96.62
cd07493	261	Peptidases_S8_9 Peptidase S8 family domain, unchar	96.56
cd07483	291	Peptidases_S8_Subtilisin_Novo-like Peptidase S8 fa	96.53
cd07498	242	Peptidases_S8_15 Peptidase S8 family domain, uncha	96.43
cd07474	295	Peptidases_S8_subtilisin_Vpr-like Peptidase S8 fam	96.38
cd07492	222	Peptidases_S8_8 Peptidase S8 family domain, unchar	96.37
cd07480	297	Peptidases_S8_12 Peptidase S8 family domain, uncha	96.23
cd07473	259	Peptidases_S8_Subtilisin_like Peptidase S8 family	96.15
cd04848	267	Peptidases_S8_Autotransporter_serine_protease_like	96.14
cd07496	285	Peptidases_S8_13 Peptidase S8 family domain, uncha	95.93
cd07497	311	Peptidases_S8_14 Peptidase S8 family domain, uncha	95.65
cd07476	267	Peptidases_S8_thiazoline_oxidase_subtilisin-like_p	95.55
cd07485	273	Peptidases_S8_Fervidolysin_like Peptidase S8 famil	95.07
cd07482	294	Peptidases_S8_Lantibiotic_specific_protease Peptid	94.95
cd07484	260	Peptidases_S8_Thermitase_like Peptidase S8 family	94.95
cd07494	298	Peptidases_S8_10 Peptidase S8 family domain, uncha	94.4
cd07475	346	Peptidases_S8_C5a_Peptidase Peptidase S8 family do	94.36
cd00306	241	Peptidases_S8_S53 Peptidase domain in the S8 and S	94.29
cd04843	277	Peptidases_S8_11 Peptidase S8 family domain, uncha	93.76
cd07477	229	Peptidases_S8_Subtilisin_subset Peptidase S8 famil	93.58
PF00082	282	Peptidase_S8: Subtilase family This is family S8 i	91.48
cd04077	255	Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8	91.21
cd04842	293	Peptidases_S8_Kp43_protease Peptidase S8 family do	90.11
cd05561	239	Peptidases_S8_4 Peptidase S8 family domain, unchar	89.54
cd07479	255	Peptidases_S8_SKI-1_like Peptidase S8 family domai	88.3
cd07489	312	Peptidases_S8_5 Peptidase S8 family domain, unchar	85.87
KOG3052|consensus	311		84.62
cd04852	307	Peptidases_S8_3 Peptidase S8 family domain, unchar	83.18
cd07491	247	Peptidases_S8_7 Peptidase S8 family domain, unchar	81.2

>KOG3526|consensus

Probab=99.88  E-value=3.6e-23  Score=172.91  Aligned_cols=66  Identities=44%  Similarity=0.720  Sum_probs=62.1

Q ss_pred             CCCcc-cCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHH----hcCCC-CeEEEEccCCC
Q psy2097           1 MLDGV-VNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQAT----EGFPR-SHLYFIEPGVT   66 (91)
Q Consensus         1 mLdg~-vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~----~Gr~g-GsIYVfa~GNg   66 (91)
                      |||++ +||++||.++++.++.|||||+||||.||||||+||..++++|+.    ||||| |||||||||.|
T Consensus       242 mldqpymtdlieansmghep~kihiysaswgptddgktvdgprnatmraiv~gvnegrnglgsiyvwasgdg  313 (629)
T KOG3526|consen  242 MLDQPYMTDLIEANSMGHEPSKIHIYSASWGPTDDGKTVDGPRNATMRAIVRGVNEGRNGLGSIYVWASGDG  313 (629)
T ss_pred             ecCCchhhhhhhhcccCCCCceEEEEecccCcCCCCcccCCchhHHHHHHHHhhhcccCCcccEEEEecCCC
Confidence            89999 999999999999999999999999999999999999999999954    57788 99999999984

>KOG3525|consensus

Probab=99.55  E-value=1.6e-15  Score=123.81  Aligned_cols=66  Identities=48%  Similarity=0.808  Sum_probs=61.7

Q ss_pred             CCCcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHh----cCCC-CeEEEEccCCC
Q psy2097           1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATE----GFPR-SHLYFIEPGVT   66 (91)
Q Consensus         1 mLdg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~----Gr~g-GsIYVfa~GNg   66 (91)
                      ||++.++|++||.++.|+++++|||||||+|.||++++++|..+..+|++.    ||.+ |+|+|||+||+
T Consensus       114 ~l~~~v~~~~~~~~~~~~~~~~di~scsw~pddd~~t~~~~~~l~~~~~~~~~~~g~~~~gs~~v~as~ng  184 (431)
T KOG3525|consen  114 MLAGCVSDAVEAPSLGFGPCHIDIYSCSWGPDDDGKTCDGPGTLAREALVYGRGCGRHGKGSIFVWASGNG  184 (431)
T ss_pred             eeeeecccceecccccCCCCCceeecCcCCcccCCCcCCCCcchhhhhhhccccccccCCCCeeEEEecCc
Confidence            789999999999999999999999999999999999999999999998776    4566 99999999993

>cd04059 Peptidases_S8_Protein_convertases_Kexins_Furin-like Peptidase S8 family domain in Protein convertases

Probab=98.11  E-value=1.6e-05  Score=59.01  Aligned_cols=66  Identities=52%  Similarity=0.844  Sum_probs=54.0

Q ss_pred             CcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHH----HHhcCCC-CeEEEEccCCCCc
Q psy2097           3 DGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQ----ATEGFPR-SHLYFIEPGVTKW   68 (91)
Q Consensus         3 dg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~a----l~~Gr~g-GsIYVfa~GNg~~   68 (91)
                      +...++..++.++.+..+.++|.++|||+......+++|..+..++    +++++++ |-|+|||+||...
T Consensus       120 ~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~gilvV~AAGN~g~  190 (297)
T cd04059         120 DGDVTDVVEAESLGLNPDYIDIYSNSWGPDDDGKTVDGPGPLAQRALENGVTNGRNGKGSIFVWAAGNGGN  190 (297)
T ss_pred             CCccccHHHHHHHhcccCCceEEECCCCCCCCCCccCCCcHHHHHHHHHHHHhCCCCCceEEEEeCCCCCC
Confidence            3446678899999999999999999999988887788888776555    5556665 9999999999554

Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.

>cd07490 Peptidases_S8_6 Peptidase S8 family domain, uncharacterized subfamily 6

Probab=96.77  E-value=0.0019  Score=46.78  Aligned_cols=43  Identities=16%  Similarity=0.207  Sum_probs=30.7

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|+++|||..+..   ..|.....+++++.  .|-|+||++||..
T Consensus        97 ~~~~Vin~S~g~~~~~---~~~~~~~~~~~~~~--~g~lvV~aAGN~g  139 (254)
T cd07490          97 KDADVVSMSLGGTYYS---EDPLEEAVEALSNQ--TGALFVVSAGNEG  139 (254)
T ss_pred             CCCCEEEECCCcCCCC---CcHHHHHHHHHHHc--CCCEEEEeCCCCC
Confidence            5689999999987765   33444444555543  4899999999953

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07487 Peptidases_S8_1 Peptidase S8 family domain, uncharacterized subfamily 1

Probab=96.64  E-value=0.0024  Score=46.12  Aligned_cols=45  Identities=13%  Similarity=0.076  Sum_probs=32.7

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      .++|+++|||.....   ........+++++.++.|-|+|+++||...
T Consensus       106 ~~~Iin~S~g~~~~~---~~~~~~~~~~~~~~~~~gilvv~aaGN~~~  150 (264)
T cd07487         106 NIRVVNLSLGAPPDP---SYGEDPLCQAVERLWDAGIVVVVAAGNSGP  150 (264)
T ss_pred             CceEEEeccCCCCCC---CCCCCHHHHHHHHHHhCCCEEEEeCCCCCC
Confidence            799999999987654   112233345666666679999999999543

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07481 Peptidases_S8_BacillopeptidaseF-like Peptidase S8 family domain in BacillopeptidaseF-like proteins

Probab=96.62  E-value=0.0039  Score=46.11  Aligned_cols=53  Identities=13%  Similarity=0.091  Sum_probs=34.2

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCccccccccCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPS   78 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s~~d~~~~~~   78 (91)
                      +.+||.++|||....      .......+++.-+..|-|+||++||...........|.
T Consensus       118 ~~~~Iin~S~G~~~~------~~~~~~~~~~~~~~~gvlvV~aaGN~~~~~~~~~~~pa  170 (264)
T cd07481         118 LAPDVINNSWGGPSG------DNEWLQPAVAAWRAAGIFPVFAAGNDGPRCSTLNAPPA  170 (264)
T ss_pred             cCCeEEEeCCCcCCC------CchHHHHHHHHHHHCCCEEEEECCCCCCCCCCCcCCCC
Confidence            557999999998765      12222345555556699999999996543333333343

Bacillus subtilis produces and secretes proteases and other types of exoenzymes at the end of the exponential phase of growth. The ones that make up this group is known as bacillopeptidase F, encoded by bpr, a serine protease with high esterolytic activity which is inhibited by PMSF. Like other members of the peptidases S8 family these have a Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity.

>cd07493 Peptidases_S8_9 Peptidase S8 family domain, uncharacterized subfamily 9

Probab=96.56  E-value=0.0051  Score=45.31  Aligned_cols=49  Identities=20%  Similarity=0.171  Sum_probs=35.1

Q ss_pred             CcceeecCCCCCCCCCCc--------cccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRT--------VDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~t--------vegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.++|||....-..        ++++.....+++++.+..|-++|||+||...
T Consensus       103 ~~v~VIn~S~G~~~~~~~~~~~~~~~~~~~~~~l~~a~~~a~~~gilvv~AAGN~g~  159 (261)
T cd07493         103 LGVDIISSSLGYTTFDNPTYSYTYADMDGKTSFISRAANIAASKGMLVVNSAGNEGS  159 (261)
T ss_pred             cCCCEEEeCCCcCCCCCcccccccccccccchHHHHHHHHHHhCCeEEEEECCCCCC
Confidence            458999999997655432        3344344456777777779999999999543

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07483 Peptidases_S8_Subtilisin_Novo-like Peptidase S8 family domain in Subtilisin_Novo-like proteins

Probab=96.53  E-value=0.0042  Score=47.23  Aligned_cols=60  Identities=13%  Similarity=0.072  Sum_probs=39.4

Q ss_pred             cCcHHHHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCccc
Q psy2097           6 VNDAVEARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSI   70 (91)
Q Consensus         6 vTD~~EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s~   70 (91)
                      ..+...++|+.|.. +.++|.++|||..-     ........+|++.-+..|.|+|||+||.....
T Consensus       125 ~~~~~i~~Ai~~a~~~g~~IiN~S~G~~~-----~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~  185 (291)
T cd07483         125 ERDKDIANAIRYAVDNGAKVINMSFGKSF-----SPNKEWVDDAIKYAESKGVLIVHAAGNDGLDL  185 (291)
T ss_pred             cCHHHHHHHHHHHHHCCCcEEEeCCCCCC-----CCccHHHHHHHHHHHhCCeEEEEeCCCCCCCC
Confidence            34445556665533 35899999999631     11224455677777767999999999965433

Subtilisins are a group of alkaline proteinases originating from different strains of Bacillus subtilis. Novo is one of the strains that produced enzymes belonging to this group. The enzymes obtained from the Novo and BPN' strains are identical. The Carlsburg and Novo subtilisins are thought to have arisen from a common ancestral protein. They have similar peptidase and esterase activities, pH profiles, catalyze transesterification reactions, and are both inhibited by diispropyl fluorophosphate, though they differ in 85 positions in the amino acid sequence. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a cat

>cd07498 Peptidases_S8_15 Peptidase S8 family domain, uncharacterized subfamily 15

Probab=96.43  E-value=0.0046  Score=44.60  Aligned_cols=48  Identities=25%  Similarity=0.326  Sum_probs=34.3

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCC-CeEEEEccCCCCccc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR-SHLYFIEPGVTKWSI   70 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~g-GsIYVfa~GNg~~s~   70 (91)
                      +.++|.++|||......   .......+++++.+.+ |-|+||++||.....
T Consensus        96 ~~~~Vin~S~g~~~~~~---~~~~~~~~~~~~~~~~~gvliv~aaGN~g~~~  144 (242)
T cd07498          96 NGADVISNSWGGSDSTE---SISSAIDNAATYGRNGKGGVVLFAAGNSGRSV  144 (242)
T ss_pred             CCCeEEEeccCCCCCCc---hHHHHHHHHHHHHhhcCCeEEEEecCCCCCcc
Confidence            45899999999865542   1122334568888885 999999999965443

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07474 Peptidases_S8_subtilisin_Vpr-like Peptidase S8 family domain in Vpr-like proteins

Probab=96.38  E-value=0.0034  Score=46.39  Aligned_cols=41  Identities=15%  Similarity=0.246  Sum_probs=31.6

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      .++|.++|||.....     +.....+++++....|-|+||++||.
T Consensus       119 ~~~Iin~S~g~~~~~-----~~~~~~~~~~~~~~~gil~V~aAGN~  159 (295)
T cd07474         119 GMDVINLSLGSSVNG-----PDDPDAIAINNAVKAGVVVVAAAGNS  159 (295)
T ss_pred             CCCEEEeCCCCCCCC-----CCCHHHHHHHHHHhcCCEEEEECCCC
Confidence            689999999986544     44455566666666689999999994

The maturation of the peptide antibiotic (lantibiotic) subtilin in Bacillus subtilis ATCC 6633 includes posttranslational modifications of the propeptide and proteolytic cleavage of the leader peptide. Vpr was identified as one of the proteases, along with WprA, that are capable of processing subtilin. Asp, Ser, His triadPeptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07492 Peptidases_S8_8 Peptidase S8 family domain, uncharacterized subfamily 8

Probab=96.37  E-value=0.0042  Score=44.51  Aligned_cols=50  Identities=22%  Similarity=0.214  Sum_probs=33.5

Q ss_pred             HHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          13 RALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        13 ~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +|+.|-. +.++|.++|||...+.     +.....+++++....|.|+||++||..
T Consensus        82 ~ai~~a~~~~v~Vin~S~G~~~~~-----~~~~~~~~~~~a~~~g~l~V~aagN~~  132 (222)
T cd07492          82 KALRACVENDIRIVNLSLGGPGDR-----DFPLLKELLEYAYKAGGIIVAAAPNNN  132 (222)
T ss_pred             HHHHHHHHCCCCEEEeCCCCCCCC-----cCHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            3443333 5689999999987654     233344555555555889999999943

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07480 Peptidases_S8_12 Peptidase S8 family domain, uncharacterized subfamily 12

Probab=96.23  E-value=0.0067  Score=45.84  Aligned_cols=46  Identities=20%  Similarity=0.160  Sum_probs=29.5

Q ss_pred             cceeecCCCCCCCCCCcccc--C---hHHHHHHHHhcC---------------CC-CeEEEEccCCC
Q psy2097          21 HIDIYSASWGPEDDGRTVDG--P---GPLLMVQATEGF---------------PR-SHLYFIEPGVT   66 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tveg--P---~~Lt~~al~~Gr---------------~g-GsIYVfa~GNg   66 (91)
                      ..+|.++|||...+|+...+  +   ..-.++++.+-.               .+ |.|+||++||.
T Consensus       102 g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~gvlvV~aAGN~  168 (297)
T cd07480         102 GADVISMSLGADFPGLVDQGWPPGLAFSRALEAYRQRARLFDALMTLVAAQAALARGTLIVAAAGNE  168 (297)
T ss_pred             CCCEEEeccCCCCcccccccCCCCchhHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCceEEEecCCC
Confidence            36999999999887764332  1   111233322222               44 99999999994

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07473 Peptidases_S8_Subtilisin_like Peptidase S8 family domain in Subtilisin-like proteins

Probab=96.15  E-value=0.0095  Score=43.27  Aligned_cols=54  Identities=19%  Similarity=0.260  Sum_probs=36.9

Q ss_pred             cHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCcc
Q psy2097           8 DAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWS   69 (91)
Q Consensus         8 D~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s   69 (91)
                      ++.+|-....+ +.++|.++|||....       .....+++++....|-|+||++||....
T Consensus       108 ~~~~a~~~a~~-~~~~vin~S~G~~~~-------~~~~~~~~~~~~~~g~ivV~aaGN~g~~  161 (259)
T cd07473         108 DAIKAIDYAVD-MGAKIINNSWGGGGP-------SQALRDAIARAIDAGILFVAAAGNDGTN  161 (259)
T ss_pred             HHHHHHHHHHH-CCCeEEEeCCCCCCC-------CHHHHHHHHHHHhCCCEEEEeCCCCCCC
Confidence            44444333333 679999999998655       3344566666666699999999995443

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases

Probab=96.14  E-value=0.011  Score=42.08  Aligned_cols=48  Identities=21%  Similarity=0.336  Sum_probs=33.8

Q ss_pred             CcceeecCCCCCCCCCCccc--------cChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVD--------GPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tve--------gP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.+.|||+.......+        .......+++++-...|-|+|+++||..
T Consensus       102 ~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~iv~aaGN~~  157 (267)
T cd04848         102 SGVRIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAANAGGLFVFAAGNDG  157 (267)
T ss_pred             CCCeEEEccCCCCCcccccccchhhhccccchHHHHHHHHHhhCCeEEEEeCCCCC
Confidence            45899999999988665433        1223334456666666999999999943

Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.

>cd07496 Peptidases_S8_13 Peptidase S8 family domain, uncharacterized subfamily 13

Probab=95.93  E-value=0.011  Score=44.27  Aligned_cols=44  Identities=14%  Similarity=0.103  Sum_probs=33.2

Q ss_pred             CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          19 INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        19 ~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      .+..+|.++|||.....      .....+++++.+..|.|.|||+||...
T Consensus       135 ~~~~~Iin~S~G~~~~~------~~~~~~ai~~a~~~GvivV~AAGN~g~  178 (285)
T cd07496         135 PNPAKVINLSLGGDGAC------SATMQNAINDVRARGVLVVVAAGNEGS  178 (285)
T ss_pred             CCCCeEEEeCCCCCCCC------CHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence            46689999999985432      334456777777779999999999543

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07497 Peptidases_S8_14 Peptidase S8 family domain, uncharacterized subfamily 14

Probab=95.65  E-value=0.013  Score=45.86  Aligned_cols=51  Identities=20%  Similarity=0.199  Sum_probs=32.0

Q ss_pred             HhccC-CCcceeecCCCCCCCCCCccccCh----HHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          14 ALGLN-INHIDIYSASWGPEDDGRTVDGPG----PLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        14 ALsy~-~~~idIYScSWGP~DdG~tvegP~----~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      ++.|. .+.+||.++|||....-.+...|+    .....++.+  +.|-++|||+||.
T Consensus       123 ~~~~~~~~~~~VIN~S~G~~~~~~~~~~~g~~~~~~~~d~~~~--~~Gv~vV~AAGN~  178 (311)
T cd07497         123 SWIYTGGPRVDVISNSWGISNFAYTGYAPGLDISSLVIDALVT--YTGVPIVSAAGNG  178 (311)
T ss_pred             hhhhccCCCceEEEecCCcCCCCccccccCcCHHHHHHHHHHh--cCCCEEEEeCCCC
Confidence            33443 467999999999865543333332    223333432  4499999999994

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases

Probab=95.55  E-value=0.011  Score=44.81  Aligned_cols=55  Identities=20%  Similarity=0.165  Sum_probs=37.6

Q ss_pred             HHHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          10 VEARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        10 ~EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      ..++|+.|.. +.+||-++|||+...-   ..+.....+|++.-+..|-|+|||+||..
T Consensus        94 ~i~~ai~~a~~~g~~VIN~S~G~~~~~---~~~~~~l~~a~~~a~~~gvlvv~AaGN~g  149 (267)
T cd07476          94 DLARAINLALEQGAHIINISGGRLTQT---GEADPILANAVAMCQQNNVLIVAAAGNEG  149 (267)
T ss_pred             HHHHHHHHHHHCCCCEEEecCCcCCCC---CCCCHHHHHHHHHHHHCCCEEEEecCCCC
Confidence            4445554444 3489999999975421   12344556777777777999999999954

Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).

>cd07485 Peptidases_S8_Fervidolysin_like Peptidase S8 family domain in Fervidolysin

Probab=95.07  E-value=0.031  Score=41.53  Aligned_cols=60  Identities=18%  Similarity=0.126  Sum_probs=32.2

Q ss_pred             cHHHHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcC--CC-CeEEEEccCCCC
Q psy2097           8 DAVEARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGF--PR-SHLYFIEPGVTK   67 (91)
Q Consensus         8 D~~EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr--~g-GsIYVfa~GNg~   67 (91)
                      +...++|+.|.. +.++|.++|||......--..-......+.++.+  .. |.|+|||+||..
T Consensus       110 ~~~~~~ai~~a~~~g~~Vin~S~g~~~~~~~~~~~~~a~~~~~~~~~~~~~~g~lvv~AaGN~g  173 (273)
T cd07485         110 DDAVAAAIVYAADNGAVILQNSWGGTGGGIYSPLLKDAFDYFIENAGGSPLDGGIVVFSAGNSY  173 (273)
T ss_pred             HHHHHHHHHHHHHcCCcEEEecCCCCCccccCHHHHHHHHHHHHhcccccCCCeEEEEecCCCC
Confidence            333444443322 3589999999986532111101111123344432  22 999999999953

Fervidolysin found in Fervidobacterium pennivorans is an extracellular subtilisin-like keratinase. It is contains a signal peptide, a propeptide, and a catalytic region. The tertiary structure of fervidolysin is similar to that of subtilisin. It contains a Asp/His/Ser catalytic triad and is a member of the peptidase S8 (subtilisin and kexin) family. The catalytic triad is similar to that found in trypsin-like proteases, but it does not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. Howev

>cd07482 Peptidases_S8_Lantibiotic_specific_protease Peptidase S8 family domain in Lantiobiotic (lanthionine-containing antibiotics) specific proteases

Probab=94.95  E-value=0.039  Score=40.54  Aligned_cols=51  Identities=8%  Similarity=-0.039  Sum_probs=32.9

Q ss_pred             CcceeecCCCCCCCCCCccccCh----HHHHHHHHhcCCCCeEEEEccCCCCccc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPG----PLLMVQATEGFPRSHLYFIEPGVTKWSI   70 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~----~Lt~~al~~Gr~gGsIYVfa~GNg~~s~   70 (91)
                      +.++|.++|||........+.+.    ..-.+++++.+..|-|+|||+||.....
T Consensus       105 ~~~~vin~S~G~~~~~~~~~~~~~~~~~~~~~~i~~a~~~g~lvv~AAGN~g~~~  159 (294)
T cd07482         105 DGVDVINLSLGGYLIIGGEYEDDDVEYNAYKKAINYAKSKGSIVVAAAGNDGLDV  159 (294)
T ss_pred             CCCCEEEeCCccCCCCCcccccchhhhHHHHHHHHHHHHCCCEEEEeCCCCCccc
Confidence            34899999999755443322111    1223456665566999999999965544

Lantiobiotic (lanthionine-containing antibiotics) specific proteases are very similar in structure to serine proteases. Lantibiotics are ribosomally synthesised antimicrobial agents derived from ribosomally synthesised peptides with antimicrobial activities against Gram-positive bacteria. The proteases that cleave the N-terminal leader peptides from lantiobiotics include: epiP, nsuP, mutP, and nisP. EpiP, from Staphylococcus, is thought to cleave matured epidermin. NsuP, a dehydratase from Streptococcus and NisP, a membrane-anchored subtilisin-like serine protease from Lactococcus cleave nisin. MutP is highly similar to epiP and nisP and is thought to process the prepeptide mutacin III of S. mutans. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family h

>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins

Probab=94.95  E-value=0.028  Score=41.05  Aligned_cols=42  Identities=10%  Similarity=0.032  Sum_probs=31.6

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.+.|||.+.       +.....++++.-...|.|+|+++||...
T Consensus       124 ~~~~iin~S~g~~~-------~~~~~~~~~~~a~~~gilvV~aaGN~g~  165 (260)
T cd07484         124 KGAKVINLSLGGGL-------GSTALQEAINYAWNKGVVVVAAAGNEGV  165 (260)
T ss_pred             CCCeEEEecCCCCC-------CCHHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            34899999999876       3344556666666679999999999544

Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid

>cd07494 Peptidases_S8_10 Peptidase S8 family domain, uncharacterized subfamily 10

Probab=94.40  E-value=0.067  Score=41.29  Aligned_cols=49  Identities=20%  Similarity=0.300  Sum_probs=31.8

Q ss_pred             CcceeecCCCCCCCCCCc------cccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRT------VDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~t------vegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +..||.++|||.......      +........+|+++-++.|-+.|+|+||..+
T Consensus       103 ~g~dVIn~SlG~~~~~~~~~~~~~~~~~~~al~~ai~~A~~~Gi~vVaAAGN~~~  157 (298)
T cd07494         103 LSPDIISNSWGYDLRSPGTSWSRSLPNALKALAATLQDAVARGIVVVFSAGNGGW  157 (298)
T ss_pred             cCCCEEEeecccCCCCcccccccccchhhHHHHHHHHHHHHCCcEEEEeCCCCCC
Confidence            568999999997432211      1111222345677766779999999999543

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07475 Peptidases_S8_C5a_Peptidase Peptidase S8 family domain in Streptococcal C5a peptidases

Probab=94.36  E-value=0.067  Score=40.75  Aligned_cols=45  Identities=9%  Similarity=-0.040  Sum_probs=34.0

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||....-.   .+.....+++++-+..|-++||++||..
T Consensus       143 ~g~~Vin~S~G~~~~~~---~~~~~~~~~~~~a~~~giliv~aAGN~g  187 (346)
T cd07475         143 LGADVINMSLGSTAGFV---DLDDPEQQAIKRAREAGVVVVVAAGNDG  187 (346)
T ss_pred             cCCCEEEECCCcCCCCC---CCCCHHHHHHHHHhhCCeEEEEeCCCCC
Confidence            35789999999865543   3445556777777777999999999954

Streptococcal C5a peptidase (SCP), is a highly specific protease and adhesin/invasin. The subtilisin-like protease domain is located at the N-terminus and contains a protease-associated domain inserted into a loop. There are three fibronectin type III (Fn) domains at the C-terminus. SCP binds to integrins with the help of Arg-Gly-Asp motifs which are thought to stabilize conformational changes required for substrate binding. Peptidases S8 or Subtilases are a serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intr

>cd00306 Peptidases_S8_S53 Peptidase domain in the S8 and S53 families

Probab=94.29  E-value=0.1  Score=35.65  Aligned_cols=48  Identities=15%  Similarity=0.076  Sum_probs=33.3

Q ss_pred             CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCC-CeEEEEccCCCCcccc
Q psy2097          19 INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR-SHLYFIEPGVTKWSIE   71 (91)
Q Consensus        19 ~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~g-GsIYVfa~GNg~~s~~   71 (91)
                      .+.++|.++|||.....     +.....+++.+-... |-|+|+++||......
T Consensus        99 ~~~~~iin~S~g~~~~~-----~~~~~~~~~~~~~~~~~~i~V~aaGN~~~~~~  147 (241)
T cd00306          99 DQGADVINLSLGGPGSP-----PSSALSEAIDYALAKLGVLVVAAAGNDGPDGG  147 (241)
T ss_pred             ccCCCEEEeCCCCCCCC-----CCHHHHHHHHHHHHhcCeEEEEecCCCCCCCC
Confidence            47799999999986554     333334444444444 9999999999655443

Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) family include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid has the same role here as the histidine base. However, the aspartic acid residue that acts as an electrophile is quite different. In S53, it follows glutamic acid, while in S8 it precedes histidine. The stability of these enzymes may be enhanced by calcium; some members hav

>cd04843 Peptidases_S8_11 Peptidase S8 family domain, uncharacterized subfamily 11

Probab=93.76  E-value=0.17  Score=38.84  Aligned_cols=49  Identities=8%  Similarity=-0.017  Sum_probs=34.8

Q ss_pred             CcceeecCCCCCCCCCCccccChH---HHHHHHHhcCCCCeEEEEccCCCCcc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGP---LLMVQATEGFPRSHLYFIEPGVTKWS   69 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~---Lt~~al~~Gr~gGsIYVfa~GNg~~s   69 (91)
                      ..+.+-+.|||..+...... |..   ...+|+++-+..|.++|+++||....
T Consensus       104 ~~v~~in~s~g~~~~~~~~~-p~~~~~~~~~av~~a~~~G~~vV~AAGN~~~~  155 (277)
T cd04843         104 GDVILLEMQTGGPNNGYPPL-PVEYEQANFDAIRTATDLGIIVVEAAGNGGQD  155 (277)
T ss_pred             CCEEEEEccccCCCcCcccC-cchhhHHHHHHHHHHHhCCcEEEEeCCCCCcc
Confidence            44677899999987765442 332   23456777776799999999996544

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07477 Peptidases_S8_Subtilisin_subset Peptidase S8 family domain in Subtilisin proteins

Probab=93.58  E-value=0.087  Score=37.35  Aligned_cols=53  Identities=21%  Similarity=0.301  Sum_probs=33.5

Q ss_pred             cHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097           8 DAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus         8 D~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      ++.+|-....+ +.++|.++|||..++-       ....+++++-...|-|+||++||...
T Consensus        84 ~l~~ai~~a~~-~~~~Vin~S~g~~~~~-------~~~~~~~~~a~~~giliv~aaGN~~~  136 (229)
T cd07477          84 DIIAGIEWAIE-NGMDIINMSLGGPSDS-------PALREAIKKAYAAGILVVAAAGNSGN  136 (229)
T ss_pred             HHHHHHHHHHH-CCCCEEEECCccCCCC-------HHHHHHHHHHHHCCCEEEEecCCCCC
Confidence            34444333333 3489999999976543       22334555555558999999999544

This group is composed of many different subtilisins: Pro-TK-subtilisin, subtilisin Carlsberg, serine protease Pb92 subtilisin, and BPN subtilisins just to name a few. Pro-TK-subtilisin is a serine protease from the hyperthermophilic archaeon Thermococcus kodakaraensis and consists of a signal peptide, a propeptide, and a mature domain. TK-subtilisin is matured from pro-TK-subtilisin upon autoprocessing and degradation of the propeptide. Unlike other subtilisins though, the folding of the unprocessed form of pro-TK-subtilisin is induced by Ca2+ binding which is almost completed prior to autoprocessing. Ca2+ is required for activity unlike the bacterial subtilisins. The propeptide is not required for folding of the mature domain unlike the bacterial subtilases because of the stability produced from Ca2+ binding. Subtilisin Carlsberg is extremely similar in structure to subtilisin BPN'/Novo thoug

>PF00082 Peptidase_S8: Subtilase family This is family S8 in the peptidase classification

Probab=91.48  E-value=0.062  Score=38.91  Aligned_cols=59  Identities=15%  Similarity=0.168  Sum_probs=30.5

Q ss_pred             CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCccccccccCCC
Q psy2097          19 INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSIEDRIVNPS   78 (91)
Q Consensus        19 ~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s~~d~~~~~~   78 (91)
                      .+.++|.+.|||+.+ +.....-..+..++++.-...|-|+|+++||........+..|.
T Consensus       102 ~~~~~Vin~S~G~~~-~~~~~~~~~~~~~~~~~~~~~g~l~v~aaGN~~~~~~~~~~~Pa  160 (282)
T PF00082_consen  102 NDGVDVINLSFGSNS-GPPDPSYSDILEEAIDYAEKKGILIVFAAGNNGPNDDRNISFPA  160 (282)
T ss_dssp             HTTSSEEEECEEBEE-SSSHSHHHHHHHHHHHHHHHTTEEEEEE--SSSSBTTBTGEBTT
T ss_pred             ccCCccccccccccc-cccccccccccccccccccccCcceeeccccccccccccccccc
Confidence            466799999999955 11110111122233443334499999999995333222244444

; InterPro: IPR000209 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase families S8 (subfamilies S8A (subtilisin) and S8B (kexin)) and S53 (sedolisin) both of which are members of clan SB. The subtilisin family is the second largest serine protease family characterised to date. Over 200 subtilises are presently known, more than 170 of which with their complete amino acid sequence []. It is widespread, being found in eubacteria, archaebacteria, eukaryotes and viruses []. The vast majority of the family are endopeptidases, although there is an exopeptidase, tripeptidyl peptidase [, ]. Structures have been determined for several members of the subtilisin family: they exploit the same catalytic triad as the chymotrypsins, although the residues occur in a different order (HDS in chymotrypsin and DHS in subtilisin), but the structures show no other similarity [, ]. Some subtilisins are mosaic proteins, while others contain N- and C-terminal extensions that show no sequence similarity to any other known protein []. Based on sequence homology, a subdivision into six families has been proposed []. The proprotein-processing endopeptidases kexin, furin and related enzymes form a distinct subfamily known as the kexin subfamily (S8B). These preferentially cleave C-terminally to paired basic amino acids. Members of this subfamily can be identified by subtly different motifs around the active site [, ]. Members of the kexin family, along with endopeptidases R, T and K from the yeast Tritirachium and cuticle-degrading peptidase from Metarhizium, require thiol activation. This can be attributed to the presence of Cys-173 near to the active histidine [].Only 1 viral member of the subtilisin family is known, a 56kDa protease from herpes virus 1, which infects the channel catfish []. Sedolisins (serine-carboxyl peptidases) are proteolytic enzymes whose fold resembles that of subtilisin; however, they are considerably larger, with the mature catalytic domains containing approximately 375 amino acids. The defining features of these enzymes are a unique catalytic triad, Ser-Glu-Asp, as well as the presence of an aspartic acid residue in the oxyanion hole. High-resolution crystal structures have now been solved for sedolisin from Pseudomonas sp. 101, as well as for kumamolisin from a thermophilic bacterium, Bacillus sp. MN-32. Mutations in the human gene leads to a fatal neurodegenerative disease []. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 3EIF_A 1XF1_B 3F7M_A 3F7O_B 2QTW_B 2W2O_A 3GCX_A 3P5B_A 3M0C_B 2XTJ_A ....

>cd04077 Peptidases_S8_PCSK9_ProteinaseK_like Peptidase S8 family domain in ProteinaseK-like proteins

Probab=91.21  E-value=0.43  Score=34.83  Aligned_cols=40  Identities=10%  Similarity=0.092  Sum_probs=28.0

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      .++|.++|||-..        .....+++.+-...|-|+||++||...
T Consensus       119 ~~~iin~S~g~~~--------~~~~~~~~~~~~~~g~liV~aaGN~g~  158 (255)
T cd04077         119 KPAVANMSLGGGA--------STALDAAVAAAVNAGVVVVVAAGNSNQ  158 (255)
T ss_pred             CCeEEEeCCCCCC--------CHHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            4799999999642        223334555555559999999999543

The peptidase S8 or Subtilase clan of proteases have a Asp/His/Ser catalytic triad that is not homologous to trypsin. This CD contains several members of this clan including: PCSK9 (Proprotein convertase subtilisin/kexin type 9), Proteinase_K, Proteinase_T, and other subtilisin-like serine proteases. PCSK9 posttranslationally regulates hepatic low-density lipoprotein receptors (LDLRs) by binding to LDLRs on the cell surface, leading to their degradation. The binding site of PCSK9 has been localized to the epidermal growth factor-like repeat A (EGF-A) domain of the LDLR. Characterized Proteinases K are secreted endopeptidases with a high degree of sequence conservation. Proteinases K are not substrate-specific and function in a wide variety of species in different pathways. It can hydrolyze keratin and other proteins with subtilisin-like specificity. The number of calcium-binding moti

>cd04842 Peptidases_S8_Kp43_protease Peptidase S8 family domain in Kp43 proteases

Probab=90.11  E-value=0.48  Score=34.87  Aligned_cols=45  Identities=20%  Similarity=0.248  Sum_probs=27.4

Q ss_pred             ceeecCCCCCCCCCCccccChHHHHHHHHh-cCC-CCeEEEEccCCCCcccc
Q psy2097          22 IDIYSASWGPEDDGRTVDGPGPLLMVQATE-GFP-RSHLYFIEPGVTKWSIE   71 (91)
Q Consensus        22 idIYScSWGP~DdG~tvegP~~Lt~~al~~-Gr~-gGsIYVfa~GNg~~s~~   71 (91)
                      ++|.++|||.....     +.....+++.. -++ .|-|.||++||......
T Consensus       116 ~~Vin~S~G~~~~~-----~~~~~~~~~~~~~~~~~g~lvV~aAGN~g~~~~  162 (293)
T cd04842         116 ARISSNSWGSPVNN-----GYTLLARAYDQFAYNNPDILFVFSAGNDGNDGS  162 (293)
T ss_pred             CEEEeccCCCCCcc-----ccchHHHHHHHHHHhCCCeEEEEeCCCCCCCCC
Confidence            89999999987653     11111122111 112 48899999999654433

Kp43 proteases are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Kp43 is topologically similar to kexin and furin both of which are proprotein convertases, but differ in amino acids sequence and the position of its C-terminal barrel. Kp43 has 3 Ca2+ binding sites that differ from the corresponding sites in the other known subtilisin-like proteases. KP-43 protease is known to be an oxidation-resistant protease when compared with the other subtilisin-like proteases

>cd05561 Peptidases_S8_4 Peptidase S8 family domain, uncharacterized subfamily 4

Probab=89.54  E-value=0.43  Score=35.32  Aligned_cols=40  Identities=13%  Similarity=0.175  Sum_probs=29.0

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|-++|||-+++        .+..+++++-.+.|-|.|+|+||..
T Consensus        92 ~g~~VIn~S~g~~~~--------~~l~~ai~~a~~~gilvv~AaGN~g  131 (239)
T cd05561          92 QGVRVVNISLAGPPN--------ALLAAAVAAAAARGMVLVAAAGNDG  131 (239)
T ss_pred             CCCCEEEeCCCCCCC--------HHHHHHHHHHHHCCCEEEEecCCCC
Confidence            458999999985432        2334566666666899999999953

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07479 Peptidases_S8_SKI-1_like Peptidase S8 family domain in SKI-1-like proteins

Probab=88.30  E-value=0.49  Score=35.44  Aligned_cols=48  Identities=21%  Similarity=0.247  Sum_probs=29.9

Q ss_pred             HHhccC-CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          13 RALGLN-INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        13 ~ALsy~-~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      +++.|- .+.+||.++|||.++.   .+  ..+ .+++.+-...|-|.|+++||.
T Consensus        90 ~a~~~a~~~~~~Vin~S~G~~~~---~~--~~~-~~~~~~~~~~gi~vV~aaGN~  138 (255)
T cd07479          90 DAFNYAILTKIDVLNLSIGGPDF---MD--KPF-VDKVWELTANNIIMVSAIGND  138 (255)
T ss_pred             HHHHhhhhcCCCEEEeeccCCCC---CC--cHH-HHHHHHHHHCCcEEEEEcCCC
Confidence            444432 2568999999997542   11  222 234444344589999999994

SKI-1 (type I membrane-bound subtilisin-kexin-isoenzyme) proteins are secretory Ca2+-dependent serine proteinases cleave at nonbasic residues: Thr, Leu, and Lys. SKI-1s play a critical role in the regulation of the synthesis and metabolism of cholesterol and fatty acid metabolism. Members of the peptidases S8 and S35 clan include endopeptidases, exopeptidases and also a tripeptidyl-peptidase. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The S53 family contains a catalytic triad Glu/Asp/Ser. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme tem

>cd07489 Peptidases_S8_5 Peptidase S8 family domain, uncharacterized subfamily 5

Probab=85.87  E-value=1.5  Score=33.28  Aligned_cols=44  Identities=20%  Similarity=0.155  Sum_probs=27.3

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.++|||.+..- ..   ..+ .+++++-...|-|.||++||...
T Consensus       123 ~~~~iIn~S~g~~~~~-~~---~~~-~~~~~~~~~~gv~iv~aaGN~g~  166 (312)
T cd07489         123 DGADVITASLGGPSGW-SE---DPW-AVVASRIVDAGVVVTIAAGNDGE  166 (312)
T ss_pred             cCCCEEEeCCCcCCCC-CC---CHH-HHHHHHHHHCCCEEEEECCCCCC
Confidence            4689999999975421 11   112 22333333348899999999543

gap in seq This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>KOG3052|consensus

Probab=84.62  E-value=0.95  Score=37.03  Aligned_cols=72  Identities=26%  Similarity=0.461  Sum_probs=50.4

Q ss_pred             CcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHH------------HHHHHh------------cCCCCeEEEEc
Q psy2097           7 NDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLL------------MVQATE------------GFPRSHLYFIE   62 (91)
Q Consensus         7 TD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt------------~~al~~------------Gr~gGsIYVfa   62 (91)
                      --..||.|+.=.-.++|      ||.|.|..+..|+.|+            .+|..|            +|.||-=|||+
T Consensus       125 ~Te~EaKa~A~eiev~D------gpdd~G~~~~RPGkLsD~~P~PYpNeeAAraANnGA~PPDLS~iv~aRhgG~DYvfS  198 (311)
T KOG3052|consen  125 YTEEEAKAMAAEIEVVD------GPDDEGEMFTRPGKLSDYFPSPYPNEEAARAANNGAYPPDLSLIVKARHGGEDYVFS  198 (311)
T ss_pred             ccHHHHHHhhhheeecc------CCCCCCCcccCCccccccCCCCCCCHHHHHHhcCCCCCCCchhhhhhhcCCcceeee
Confidence            34567777766666666      9999999999999993            233444            46778899997


Q ss_pred             --cCC----CCccccccc-cCCCCCCccc
Q psy2097          63 --PGV----TKWSIEDRI-VNPSHRGQSL   84 (91)
Q Consensus        63 --~GN----g~~s~~d~~-~~~~~~~~~~   84 (91)
                        +|-    .-.++.||. .||-.-|+.+
T Consensus       199 LLTGY~epPAGv~l~~G~~fNPyFpGgaI  227 (311)
T KOG3052|consen  199 LLTGYCEPPAGVSLREGLYFNPYFPGGAI  227 (311)
T ss_pred             hhhCCCCCCCCcccCCCcccCCCCCCccc
Confidence              343    235666765 5787777654

>cd04852 Peptidases_S8_3 Peptidase S8 family domain, uncharacterized subfamily 3

Probab=83.18  E-value=1.5  Score=33.20  Aligned_cols=44  Identities=14%  Similarity=0.110  Sum_probs=28.6

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.+.|||....    ........+++.+-+..|-+.|+++||..
T Consensus       172 ~g~~Vin~S~G~~~~----~~~~~~~~~~~~~a~~~gilvV~aAGN~g  215 (307)
T cd04852         172 DGVDVISYSIGGGSP----DPYEDPIAIAFLHAVEAGIFVAASAGNSG  215 (307)
T ss_pred             cCCCEEEeCCCCCCC----CcccCHHHHHHHHHHhCCCEEEEECCCCC
Confidence            468999999997542    11112223344445566999999999953

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

>cd07491 Peptidases_S8_7 Peptidase S8 family domain, uncharacterized subfamily 7

Probab=81.20  E-value=2.7  Score=31.60  Aligned_cols=57  Identities=23%  Similarity=0.250  Sum_probs=36.1

Q ss_pred             HHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          11 EARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        11 EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      -++|+.|.. +.+||-++|||....- ..........+|+++-.+.|-|.|.++||..-
T Consensus        91 i~~Ai~~Ai~~gadIIn~S~g~~~~~-~~~~~~~~l~~ai~~A~~~GilvvaaAGN~g~  148 (247)
T cd07491          91 AAKAIEAAVEKKVDIISMSWTIKKPE-DNDNDINELENAIKEALDRGILLFCSASDQGA  148 (247)
T ss_pred             HHHHHHHHHHCCCcEEEeeeeccccc-ccccchHHHHHHHHHHHhCCeEEEEecCCCCC
Confidence            345555433 4589999999974321 11111334456677777779999999999543

This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	91
1p8j_A	471	Crystal Structure Of The Proprotein Convertase Furi		2e-15
1r64_A	481	The 2.2 A Crystal Structure Of Kex2 Protease In Com		8e-05
1ot5_A	477	The 2.4 Angstrom Crystal Sructure Of Kex2 In Comple		8e-05
2id4_A	503	The 1.9 A Structure Of Kex2 In Complex With An Ac-R		8e-05

>pdb|1P8J|A Chain A, Crystal Structure Of The Proprotein Convertase Furin Length = 471

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/55 (72%), Positives = 42/55 (76%), Gaps = 4/55 (7%)
Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPR 55
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L    A E F R
Sbjct: 119 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARL----AEEAFFR 169

>pdb|1R64|A Chain A, The 2.2 A Crystal Structure Of Kex2 Protease In Complex With Ac-Arg- Glu-Lys-Boroarg Peptidyl Boronic Acid Inhibitor Length = 481

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 1   MLDGVVNDAVEARAL--GLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEG 52
           +L G +    EA +L  GL++N  DIYS SWGP DDGR + GP  L+     +G
Sbjct: 125 ILSGDITTEDEAASLIYGLDVN--DIYSCSWGPADDGRHLQGPSDLVKKALVKG 176

>pdb|1OT5|A Chain A, The 2.4 Angstrom Crystal Sructure Of Kex2 In Complex With A Peptidyl- Boronic Acid Inhibitor Length = 477

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 1   MLDGVVNDAVEARAL--GLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEG 52
           +L G +    EA +L  GL++N  DIYS SWGP DDGR + GP  L+     +G
Sbjct: 123 ILSGDITTEDEAASLIYGLDVN--DIYSCSWGPADDGRHLQGPSDLVKKALVKG 174

>pdb|2ID4|A Chain A, The 1.9 A Structure Of Kex2 In Complex With An Ac-R-E-R-K-Chloromethyl Ketone Inhibitor. Length = 503

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 1   MLDGVVNDAVEARAL--GLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEG 52
           +L G +    EA +L  GL++N  DIYS SWGP DDGR + GP  L+     +G
Sbjct: 132 ILSGDITTEDEAASLIYGLDVN--DIYSCSWGPADDGRHLQGPSDLVKKALVKG 183

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	91
1p8j_A	471	Furin precursor; prohormone convertase, SPC1, PACE	3e-10
2id4_A	503	Kexin; KEX2, kexin, furin, proprotein, prohormone,	4e-10

>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1 Length = 471

 Score = 53.9 bits (129), Expect = 3e-10
 Identities = 37/57 (64%), Positives = 40/57 (70%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSH 57
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  L       G  +  
Sbjct: 119 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGR 175

>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A* Length = 503

 Score = 53.6 bits (128), Expect = 4e-10
 Identities = 20/44 (45%), Positives = 26/44 (59%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPL 44
           +L G +    EA +L   ++  DIYS SWGP DDGR + GP  L
Sbjct: 132 ILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDL 175

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	91
2id4_A	503	Kexin; KEX2, kexin, furin, proprotein, prohormone,	98.92
1p8j_A	471	Furin precursor; prohormone convertase, SPC1, PACE	98.89
3hjr_A	600	Extracellular serine protease; kexin, hydrolase; 1	97.48
2oxa_A	600	Extracellular serine protease; kexin, hydrolase; 1	97.22
3lxu_X	1354	Tripeptidyl-peptidase 2; spindle complex, aminopep	95.74
1gci_A	269	Subtilisin; hydrolase, serine protease; 0.78A {Bac	94.93
2iy9_A	347	SUBA; toxin, shiga, plasmid; 1.8A {Escherichia col	94.71
3t41_A	471	Epidermin leader peptide processing serine protea;	94.31
1dbi_A	280	AK.1 serine protease; hydrolase; 1.80A {Bacillus S	93.75
1sh7_A	284	Extracellular subtilisin-like serine proteinase; c	93.62
1r0r_E	274	Subtilisin carlsberg; high resolution, serine prot	93.58
2b6n_A	278	Proteinase K; S binding, substrate specificity, pr	93.32
2pwa_A	279	Proteinase K; structure, alanine boronic acid, hyd	93.02
1to2_E	281	Subtilisin BPN'; serine protease, hydrolase; HET:	92.94
1y9z_A	441	Alkaline serine protease; subtilisin-like alpha/be	92.53
2ixt_A	310	36KDA protease; serine protease, sphericase, subti	92.41
3zxy_A	282	Subtilisin-like protein; hydrolase; 1.58A {Prochlo	92.33
1thm_A	279	Thermitase; hydrolase(serine protease); 1.37A {The	92.21
2x8j_A	327	Intracellular subtilisin protease; hydrolase, seri	92.01
1r6v_A	671	Subtilisin-like serine protease; sandwich domain,	91.93
3f7m_A	279	Alkaline serine protease VER112; verticillium psal	91.82
4dzt_A	276	Aqualysin-1, aqualysin-I; serine protease, calcium	91.72
3i6s_A	649	Subtilisin-like protease; PA-domain, FN3-domain, h	91.69
2z30_A	320	TK-subtilisin; thermococcus kodakaraensis, hydrola	91.04
3lpc_A	340	APRB2; protease, subtilase, virulence factor, hydr	90.58
1wmd_A	434	Protease; alpha-beta hydrolase fold, jelly-roll be	90.02
3afg_A	539	Subtilisin-like serine protease; propeptide, therm	89.66
2z2z_A	395	TK-subtilisin precursor; thermococcus kodakaraensi	87.45
4h6x_A	357	Thiazoline oxidase/subtilisin-like protease; hydro	86.9

>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*

Probab=98.92  E-value=5.8e-10  Score=88.95  Aligned_cols=69  Identities=36%  Similarity=0.604  Sum_probs=58.8

Q ss_pred             CCCcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHH----HhcCCC-CeEEEEccCCCCcc
Q psy2097           1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQA----TEGFPR-SHLYFIEPGVTKWS   69 (91)
Q Consensus         1 mLdg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al----~~Gr~g-GsIYVfa~GNg~~s   69 (91)
                      +|++..++..+++|+.|..+..||+++|||+.++++++++|..+..+|+    ++||++ |.|+|||+||....
T Consensus       132 v~~~~~~~~~~~~ai~~a~~~~~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~  205 (503)
T 2id4_A          132 ILSGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTR  205 (503)
T ss_dssp             CTTSCCCHHHHHHHTTTTTTTCSEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGG
T ss_pred             eeCCCCChHHHHHHHHhHhhcCCEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCc
Confidence            4677788999999999999999999999999999999999988766654    456656 99999999996543

>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1

Probab=98.89  E-value=1.2e-09  Score=86.21  Aligned_cols=69  Identities=55%  Similarity=0.860  Sum_probs=58.8

Q ss_pred             CCCcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHH----HHhcCCC-CeEEEEccCCCCcc
Q psy2097           1 MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQ----ATEGFPR-SHLYFIEPGVTKWS   69 (91)
Q Consensus         1 mLdg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~a----l~~Gr~g-GsIYVfa~GNg~~s   69 (91)
                      +|++..+|+.||-.+.++++.++|+++|||+.++++++++|..+..+|    ++++|++ |.|+|||+||....
T Consensus       119 v~~g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~  192 (471)
T 1p8j_A          119 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGRE  192 (471)
T ss_dssp             CSSSCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGG
T ss_pred             ccCCchhHHHHHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCC
Confidence            467888999999999988889999999999999999999998876555    4556666 99999999996543

>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}

Probab=97.48  E-value=4.9e-05  Score=60.78  Aligned_cols=64  Identities=9%  Similarity=0.015  Sum_probs=42.7

Q ss_pred             cCcHHHHHHhccCCCcceeecCCCCCCCCCCccccC-hHHHHHH--HHhcCCC-CeEEEEccCCCCcc
Q psy2097           6 VNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGP-GPLLMVQ--ATEGFPR-SHLYFIEPGVTKWS   69 (91)
Q Consensus         6 vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP-~~Lt~~a--l~~Gr~g-GsIYVfa~GNg~~s   69 (91)
                      .+|..+|.......+.++||+||||+.........+ ......+  ....+++ |.+||+|+||+...
T Consensus       155 ~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~  222 (600)
T 3hjr_A          155 QKDWLYALGDSNASRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNK  222 (600)
T ss_dssp             HHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSE
T ss_pred             HHHHHHHhhhhhhhcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCcccc
Confidence            456677766677778899999999987554333222 2222222  2345666 99999999997543

>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}

Probab=95.74  E-value=0.0076  Score=55.07  Aligned_cols=50  Identities=16%  Similarity=0.194  Sum_probs=33.0

Q ss_pred             hccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          15 LGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        15 Lsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +..+.+.+||+++|||+.++....+.+..+..+|+.   +.|.|+|||+||..
T Consensus       327 ~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~---~~GVlVVaAAGN~G  376 (1354)
T 3lxu_X          327 LCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVN---KYGVVWVASAGNHG  376 (1354)
T ss_dssp             HHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHH---TSCCEEEEECCSCC
T ss_pred             HHhhcCCceEEEcCCccCCCCCccHHHHHHHHHHHH---hCCcEEEEeCCCCC
Confidence            333445799999999998765444433333333332   34899999999954

>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*

Probab=94.93  E-value=0.01  Score=43.50  Aligned_cols=41  Identities=17%  Similarity=0.192  Sum_probs=30.1

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||.+...       ....+++++-++.|-++|||+||..
T Consensus       115 ~~~~Vin~S~G~~~~~-------~~~~~ai~~a~~~gv~vV~AaGN~g  155 (269)
T 1gci_A          115 NGMHVANLSLGSPSPS-------ATLEQAVNSATSRGVLVVAASGNSG  155 (269)
T ss_dssp             TTCSEEEECCCBSSCC-------HHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred             CCCeEEEeCCCCCCCC-------HHHHHHHHHHHHCCCEEEEecCCCC
Confidence            4589999999986642       2333556665556999999999953

>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}

Probab=94.71  E-value=0.021  Score=42.64  Aligned_cols=46  Identities=15%  Similarity=0.057  Sum_probs=32.8

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCccc
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWSI   70 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s~   70 (91)
                      .++|.++|||....    ..+.....+|++..+..|-|+|+|+||.....
T Consensus       143 ~~~Vin~S~G~~~~----~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~  188 (347)
T 2iy9_A          143 EEKIINISGGQKGV----ASASVWTELLSRMGRNNDRLIVAAVGNDGADI  188 (347)
T ss_dssp             EEEEEEESSCBCCC-----CCHHHHHHHHHHHHHTSCEEEEECCBSCCBT
T ss_pred             CceEEEeccccCCC----CCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCC
Confidence            68999999996432    12344455667766666999999999965543

>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A

Probab=94.31  E-value=0.014  Score=45.26  Aligned_cols=50  Identities=8%  Similarity=-0.058  Sum_probs=32.1

Q ss_pred             CcceeecCCCCC-CCCCCccccCh--------HHHHHHHHhcCCCCeEEEEccCCCCcc
Q psy2097          20 NHIDIYSASWGP-EDDGRTVDGPG--------PLLMVQATEGFPRSHLYFIEPGVTKWS   69 (91)
Q Consensus        20 ~~idIYScSWGP-~DdG~tvegP~--------~Lt~~al~~Gr~gGsIYVfa~GNg~~s   69 (91)
                      +.++|.+.|||. ..++...++|.        ....++++..++.|.|+|||+||....
T Consensus       250 ~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~  308 (471)
T 3t41_A          250 DGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGID  308 (471)
T ss_dssp             TTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCB
T ss_pred             CCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcC
Confidence            468999999995 22232222221        223455666666799999999995443

>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1

Probab=93.75  E-value=0.028  Score=41.29  Aligned_cols=41  Identities=10%  Similarity=0.114  Sum_probs=29.6

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||....       .....+++++-++.|-|+|||+||..
T Consensus       126 ~g~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gilvV~AAGN~g  166 (280)
T 1dbi_A          126 SGAEVINLSLGCDCH-------TTTLENAVNYAWNKGSVVVAAAGNNG  166 (280)
T ss_dssp             TTCSEEEECCSSCCC-------CHHHHHHHHHHHHTTCEEEEECCBC-
T ss_pred             CCCCEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            458999999998532       23334566666667999999999954

>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*

Probab=93.62  E-value=0.026  Score=41.69  Aligned_cols=39  Identities=10%  Similarity=0.143  Sum_probs=29.2

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .++|.+.|||...        .....+++++-+..|-|+|||+||..
T Consensus       121 ~~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g  159 (284)
T 1sh7_A          121 GPSVANMSLGGGQ--------STALDSAVQGAIQSGVSFMLAAGNSN  159 (284)
T ss_dssp             SSEEEEECCCBSC--------CHHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CCcEEEeCCCCCC--------CHHHHHHHHHHHHCCCEEEEECCcCC
Confidence            4899999999862        23334566666666999999999954

>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...

Probab=93.58  E-value=0.026  Score=41.22  Aligned_cols=42  Identities=14%  Similarity=0.238  Sum_probs=30.4

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.++|||....       .....+++++-++.|-|+|||+||...
T Consensus       116 ~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~  157 (274)
T 1r0r_E          116 NGMDVINMSLGGASG-------STAMKQAVDNAYARGVVVVAAAGNSGN  157 (274)
T ss_dssp             TTCSEEEECEEBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCCC
T ss_pred             cCCCEEEeCCCCCCC-------cHHHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            458999999997543       223345666666669999999999543

>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}

Probab=93.32  E-value=0.027  Score=41.25  Aligned_cols=40  Identities=8%  Similarity=0.055  Sum_probs=29.9

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||...        .....+++++.++.|-|+|||+||..
T Consensus       122 ~g~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g  161 (278)
T 2b6n_A          122 SGPAVANMSLGGGA--------SQATDDAVNAAVAAGITFVVAAGNDN  161 (278)
T ss_dssp             CSSEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CCCeEEEECCCCCc--------CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            46899999999754        23334566666666999999999954

>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...

Probab=93.02  E-value=0.033  Score=41.05  Aligned_cols=40  Identities=13%  Similarity=-0.039  Sum_probs=29.2

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      .++|.++|||...        .....+++++-+..|-|+|||+||...
T Consensus       125 ~~~Vin~S~G~~~--------~~~~~~ai~~a~~~gi~vV~AAGN~g~  164 (279)
T 2pwa_A          125 KGVVASLSLGGGY--------SSSVNSAAARLQSSGVMVAVAAGNNNA  164 (279)
T ss_dssp             TEEEEEECCCEEC--------CHHHHHHHHHHHHTTEEEEEECCSSSS
T ss_pred             CccEEEecCCCCC--------CHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence            3599999999642        233445666666669999999999543

>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...

Probab=92.94  E-value=0.041  Score=40.39  Aligned_cols=42  Identities=14%  Similarity=0.191  Sum_probs=29.8

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.++|||.+..-       ....+++++-++.|-|+|||+||...
T Consensus       117 ~~~~Vin~S~G~~~~~-------~~~~~ai~~a~~~gi~vV~AAGN~g~  158 (281)
T 1to2_E          117 NNMDVINMSLGGPSGS-------AALKAAVDKAVASGVVVVAAAGNEGT  158 (281)
T ss_dssp             TTCSEEEECEEBSCCC-------HHHHHHHHHHHHTTCEEEEECCSCCC
T ss_pred             CCCcEEEECCcCCCCC-------HHHHHHHHHHHHCCCEEEEECCCCCC
Confidence            4589999999975431       23345566655569999999999543

>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*

Probab=92.53  E-value=0.077  Score=41.20  Aligned_cols=55  Identities=13%  Similarity=0.082  Sum_probs=36.4

Q ss_pred             cCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097           6 VNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus         6 vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      ..++.+|-....+...+||.++|||....       .....+|+++.++.|-|+|+|+||..
T Consensus       107 ~~~~~~ai~~a~~~~g~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g  161 (441)
T 1y9z_A          107 SSSLVAAIDTCVNSGGANVVTMSLGGSGS-------TTTERNALNTHYNNGVLLIAAAGNAG  161 (441)
T ss_dssp             SSCHHHHHHHHHHTTCCSEEEECCCBSCC-------BHHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             HHHHHHHHHHHHHhcCCcEEEeCCCCCCC-------CHHHHHHHHHHHHCCCEEEEecCCCC
Confidence            44555553333333368999999997543       12334667776666999999999954

>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*

Probab=92.41  E-value=0.051  Score=39.82  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=28.5

Q ss_pred             ceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          22 IDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        22 idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .+|.++|||....       .....+++++-++.|-|+|||+||..
T Consensus       133 ~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g  171 (310)
T 2ixt_A          133 KTIISMSLGSSAN-------NSLISSAVNYAYSKGVLIVAAAGNSG  171 (310)
T ss_dssp             CEEEEECCCBSSC-------CHHHHHHHHHHHHTTCEEEEECCSCC
T ss_pred             CeEEEEcCCCCCC-------CHHHHHHHHHHHhCCcEEEEcCCCCC
Confidence            4999999998654       23334556655556999999999954

>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A

Probab=92.33  E-value=0.046  Score=39.67  Aligned_cols=59  Identities=15%  Similarity=0.009  Sum_probs=38.0

Q ss_pred             cCcHHHHHHhccC-CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097           6 VNDAVEARALGLN-INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus         6 vTD~~EA~ALsy~-~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .++..-++++.|. .+.++|.++|||...+.   ..+.....+|++..++.|-|+|+|+||..
T Consensus        89 ~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~---~~~~~~~~~ai~~a~~~gi~vV~AaGN~g  148 (282)
T 3zxy_A           89 ITQLDLARGIERAVNAGAHIINISGGELTDF---GEADGWLENAVSLCRQNNVLLVAAAGNNG  148 (282)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEECCCEEESS---SCCCHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred             chHHHHHHHHHHhhccCCeEEeccCcccccc---ccccHHHHHHHHHHhhcCceEEEecccCC
Confidence            3444444555543 24589999999964332   12334455677777777999999999954

>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E

Probab=92.21  E-value=0.059  Score=39.40  Aligned_cols=41  Identities=12%  Similarity=0.099  Sum_probs=29.7

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||....-       ....+++++-++.|-|+|+|+||..
T Consensus       125 ~g~~Vin~S~G~~~~~-------~~l~~ai~~a~~~gvlvV~AAGN~g  165 (279)
T 1thm_A          125 QGAKVISLSLGGTVGN-------SGLQQAVNYAWNKGSVVVAAAGNAG  165 (279)
T ss_dssp             TTCSEEEECCCBSSCC-------HHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CCCCEEEEecCCCCCC-------HHHHHHHHHHHHCCCEEEEeCCCCC
Confidence            4689999999986432       2234556665556999999999954

>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*

Probab=92.01  E-value=0.042  Score=41.26  Aligned_cols=42  Identities=14%  Similarity=0.063  Sum_probs=29.7

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      +.++|.++|||...+-       ....+++++-++.|-++|||+||...
T Consensus       145 ~~~~Vin~S~G~~~~~-------~~~~~ai~~a~~~gi~vV~AAGN~g~  186 (327)
T 2x8j_A          145 EQMRIITMSLGGPTDS-------EELHDAVKYAVSNNVSVVCAAGNEGD  186 (327)
T ss_dssp             CCCSEEEECEEBSCCC-------HHHHHHHHHHHHTTCEEEEECCCT--
T ss_pred             CCceEEEECCCcCCCC-------HHHHHHHHHHHHCCCeEEEEcCCCCC
Confidence            6689999999975431       23345566666669999999999543

>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1

Probab=91.93  E-value=0.043  Score=46.31  Aligned_cols=55  Identities=13%  Similarity=0.137  Sum_probs=36.4

Q ss_pred             cCcHHHHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097           6 VNDAVEARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus         6 vTD~~EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .++..-++|+.|.. +.+||.++|||.....       ....+|++..++.|.|+|+|+||..
T Consensus       244 ~s~~~i~~ai~~A~~~gadVIN~SlG~~~~s-------~~l~~Ai~~A~~~GvlvVaAAGN~g  299 (671)
T 1r6v_A          244 VGDDYVAAGIIWATDHGAKVMNHSWGGWGYS-------YTMKEAFDYAMEHGVVMVVSAGNNT  299 (671)
T ss_dssp             CCHHHHHHHHHHHHHTTCSEEEECEEBSCCC-------HHHHHHHHHHHHTTCEEEEECCSCS
T ss_pred             cCHHHHHHHHHHHHHcCCCEEEeCCCCCCCC-------HHHHHHHHHHHhCCCEEEEeCCCCC
Confidence            34444455554422 4589999999986432       2334566666666999999999954

>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A

Probab=91.82  E-value=0.065  Score=38.91  Aligned_cols=39  Identities=15%  Similarity=0.045  Sum_probs=28.0

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .++|.+.|||..        ......+++++-...|-|+|||+||..
T Consensus       126 ~~~Vin~S~g~~--------~~~~~~~a~~~a~~~gv~vV~AAGN~g  164 (279)
T 3f7m_A          126 RRTVASMSLGGG--------YSAALNQAAARLQSSGVFVAVAAGNDN  164 (279)
T ss_dssp             TEEEEEECCCEE--------CCHHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CCeEEEeCCCcC--------ccHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            489999999953        223344555555556899999999953

>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}

Probab=91.72  E-value=0.075  Score=38.50  Aligned_cols=40  Identities=13%  Similarity=0.138  Sum_probs=28.6

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      ..++|.++|||-..        .....+++++-+..|-|+|+|+||..
T Consensus       120 ~~~~vin~S~g~~~--------~~~~~~a~~~a~~~gvlvv~AAGN~g  159 (276)
T 4dzt_A          120 RRPAVANMSLGGGV--------STALDNAVKNSIAAGVVYAVAAGNDN  159 (276)
T ss_dssp             CSSEEEEECCCEEC--------CHHHHHHHHHHHHTTCEEEEECCSSS
T ss_pred             CCCeEEEECCCCCC--------CHHHHHHHHHHHhCCCEEEEECCCCC
Confidence            36899999999532        23334556665566899999999943

>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*

Probab=91.69  E-value=0.11  Score=43.29  Aligned_cols=43  Identities=16%  Similarity=0.087  Sum_probs=27.8

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      +.+||.|+|||........+ +-   ..++.+-++.|-+.|+|+||.
T Consensus       164 ~gvdVIn~SlG~~~~~~~~~-~i---~~a~~~A~~~Gi~vV~AAGN~  206 (649)
T 3i6s_A          164 DGVDMISISYGYRFIPLYED-AI---SIASFGAMMKGVLVSASAGNR  206 (649)
T ss_dssp             TTCSEEEECCCCCSCCGGGC-HH---HHHHHHHHHTTCEEEEECCSC
T ss_pred             cCCCEEEeCCccCCcccchh-HH---HHHHHHHHhCCcEEEEeCCCC
Confidence            57899999999874432222 21   123333344577999999994

>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A

Probab=91.04  E-value=0.09  Score=39.07  Aligned_cols=41  Identities=15%  Similarity=0.202  Sum_probs=30.3

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||...+       .....+++++-++.|-|+|||+||..
T Consensus       148 ~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g  188 (320)
T 2z30_A          148 DAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEG  188 (320)
T ss_dssp             CCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred             CCceEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEeCCCCC
Confidence            478999999997543       23334566665566999999999954

>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A

Probab=90.58  E-value=0.098  Score=38.69  Aligned_cols=43  Identities=12%  Similarity=0.070  Sum_probs=28.9

Q ss_pred             CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          19 INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        19 ~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .+.++|.+.|||....      +......++++-+..|-|+|||+||..
T Consensus       166 ~~~~~Vin~S~G~~~~------~~~~~~~~~~~a~~~gi~vV~AAGN~g  208 (340)
T 3lpc_A          166 RNPAKVINMSLGSDGQ------CSYNAQTMIDRATRLGALVVVAAGNEN  208 (340)
T ss_dssp             SSCCSEEEECCCEESC------CCHHHHHHHHHHHHHTCEEEEECCSSS
T ss_pred             cCCCeEEEeCcCCCCC------cchhHHHHHHHHHhCCcEEEEeCCCCC
Confidence            3678999999996321      223334445554445899999999953

>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A

Probab=90.02  E-value=0.17  Score=39.03  Aligned_cols=56  Identities=11%  Similarity=0.102  Sum_probs=32.0

Q ss_pred             CcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097           7 NDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus         7 TD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      .+..+|-...+. +.++|.++|||....+.. . +..-+...+.  ++.|-++|||+||..
T Consensus       109 ~~~~~ai~~a~~-~g~~Vin~S~G~~~~~~~-~-~~~~~id~~~--~~~gvlvV~AAGN~g  164 (434)
T 1wmd_A          109 SNLQTLFSQAYS-AGARIHTNSWGAAVNGAY-T-TDSRNVDDYV--RKNDMTILFAAGNEG  164 (434)
T ss_dssp             SSHHHHHHHHHH-TTCSEEEECCCBCCTTCC-C-HHHHHHHHHH--HHSSCEEEEECCSCT
T ss_pred             HHHHHHHHHHHh-cCCeEEEecCCCCcCCcC-C-HHHHHHHHHH--hCCCeEEEEECCCCC
Confidence            344444333232 458999999998764321 1 1111222222  334999999999954

>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}

Probab=89.66  E-value=0.11  Score=42.08  Aligned_cols=42  Identities=12%  Similarity=0.190  Sum_probs=28.3

Q ss_pred             cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          21 HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        21 ~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      .++|.++|||......    ......+|+.+-++.|-++|+|+||.
T Consensus       240 g~~Vin~SlG~~~~~~----~~~~l~~ai~~a~~~GvlvV~AAGN~  281 (539)
T 3afg_A          240 GIKVINLSLGSSQSSD----GTDSLSQAVNNAWDAGLVVVVAAGNS  281 (539)
T ss_dssp             TEEEEEECCCCCSCCC----SCSHHHHHHHHHHHTTCEEEEECCSC
T ss_pred             CCcEEEeCCCCCCCCc----cchHHHHHHHHHHhcCCEEEEECCCC
Confidence            5899999999865421    11222344554445589999999994

>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A

Probab=87.45  E-value=0.23  Score=37.95  Aligned_cols=41  Identities=15%  Similarity=0.202  Sum_probs=29.6

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      +.++|.++|||....       .....+++++-++.|-++|+|+||..
T Consensus       223 ~~~~Vin~S~G~~~~-------~~~~~~ai~~a~~~gv~vV~AAGN~g  263 (395)
T 2z2z_A          223 DAAEVISMSLGGPAD-------DSYLYDMIIQAYNAGIVIVAASGNEG  263 (395)
T ss_dssp             CCCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSSC
T ss_pred             CCCeEEEecCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            368999999997543       22334566665566999999999943

>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A

Probab=86.90  E-value=0.14  Score=38.71  Aligned_cols=52  Identities=15%  Similarity=0.178  Sum_probs=26.2

Q ss_pred             HHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          12 ARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        12 A~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      ++|+.|.. +..+|.++|||-...-.  + ......+|++..++.|-|+|+|+||.
T Consensus       157 ~~ai~~a~~~g~~Vin~S~G~~~~~~--~-~~~~~~~ai~~a~~~gv~vV~AAGN~  209 (357)
T 4h6x_A          157 ARAIDLALELGANIIHCAFCRPTQTS--E-GEEILVQAIKKCQDNNVLIVSPTGNN  209 (357)
T ss_dssp             HHHHHHHHHTTCSEEEEC--------------CHHHHHHHHHHHTTCEEEEECC--
T ss_pred             HHHHHHHHHcCCCEEeeccccCCccc--c-chhHHHHHHHHHhhCCeEEEecccCC
Confidence            34444432 34789999999533211  1 11223455666666699999999994

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	91
d1p8ja2	334	c.41.1.1 (A:109-442) Furin, N-terminal domain {Mou	0.004

>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 334

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Furin, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.4 bits (72), Expect = 0.004
 Identities = 35/43 (81%), Positives = 37/43 (86%)

Query: 1   MLDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGP 43
           MLDG V DAVEAR+LGLN NHI IYSASWGPEDDG+TVDGP  
Sbjct: 118 MLDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPAR 160

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	91
d1p8ja2	334	Furin, N-terminal domain {Mouse (Mus musculus) [Ta	97.77
d2id4a2	339	Kexin, N-terminal domain {Baker's yeast (Saccharom	97.47
d1ga6a_	369	Serine-carboxyl proteinase, SCP {Pseudomonas sp.,	94.26
d1v6ca_	435	Alkaline serine protease Apa1 {Pseudoalteromonas s	90.67
d1dbia_	280	Thermostable serine protease {Bacillus sp., AK.1 [	89.66
d1t1ga_	357	Serine-carboxyl proteinase, SCP {Bacillus novosp.	88.9
d1r6va_	671	Fervidolysin {Fervidobacterium pennivorans [TaxId:	87.39
d1r0re_	274	Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1	85.84
d1thma_	279	Thermitase {Thermoactinomyces vulgaris [TaxId: 202	84.35
d1to2e_	281	Subtilisin {Bacillus amyloliquefaciens, Novo/BPN'	81.8

>d1p8ja2 c.41.1.1 (A:109-442) Furin, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Furin, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=2e-05  Score=54.96  Aligned_cols=69  Identities=52%  Similarity=0.762  Sum_probs=55.7

Q ss_pred             CCcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHH-----HHhcCCCCeEEEEccCCCCccc
Q psy2097           2 LDGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQ-----ATEGFPRSHLYFIEPGVTKWSI   70 (91)
Q Consensus         2 Ldg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~a-----l~~Gr~gGsIYVfa~GNg~~s~   70 (91)
                      +++...+..|+.++.++.+.++++++|||+.+.+..+++|..+....     ++...+.|.|.|+|.||+....
T Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~n~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~lvV~AaGN~~~~~  192 (334)
T d1p8ja2         119 LDGEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREH  192 (334)
T ss_dssp             SSSCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGT
T ss_pred             ccccccchHHHHHHHhhhcCCcEEeCCCCCCCcCcccCCccchhhHHHHHHHHHHHhcCCceEEEecCCCCccC
Confidence            56678889999999999999999999999999999999998876443     2223334999999999965443

>d2id4a2 c.41.1.1 (A:122-460) Kexin, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Kexin, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.47  E-value=7.2e-05  Score=52.43  Aligned_cols=69  Identities=35%  Similarity=0.570  Sum_probs=53.8

Q ss_pred             CcccCcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHH----HHhcCCC-CeEEEEccCCCCcccc
Q psy2097           3 DGVVNDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQ----ATEGFPR-SHLYFIEPGVTKWSIE   71 (91)
Q Consensus         3 dg~vTD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~a----l~~Gr~g-GsIYVfa~GNg~~s~~   71 (91)
                      ++.........++.+..+.++|+++|||+.+++..++.+..+...+    +.+.+.. |.|+|++.||......
T Consensus       126 ~~~~~~~~~~~~~~~~~~~~~v~~~s~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~i~v~AaGN~~~~~~  199 (339)
T d2id4a2         126 SGDITTEDEAASLIYGLDVNDIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGD  199 (339)
T ss_dssp             TSCCCHHHHHHHTTTTTTTCSEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTC
T ss_pred             eccccchHHHHHHHHHHhhCCEEeccCCCCCCcccccCccchhHHHHHHHHHHHHhcCCcEEEecccCCccCCC
Confidence            4455566677889999999999999999999999999888775443    3444444 9999999999665443

>d1ga6a_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Pseudomonas sp., sedolisin [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Serine-carboxyl proteinase, SCP
domain: Serine-carboxyl proteinase, SCP
species: Pseudomonas sp., sedolisin [TaxId: 306]

Probab=94.26  E-value=0.0019  Score=46.31  Aligned_cols=48  Identities=13%  Similarity=0.056  Sum_probs=32.2

Q ss_pred             CCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097          19 INHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        19 ~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      .+..||.|+|||........+.......+++++....|-++||++||.
T Consensus       123 ~~~~~Vis~S~g~~~~~~~~~~~~~~~~~a~~~a~~~Gi~vv~AaGN~  170 (369)
T d1ga6a_         123 DNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSGDE  170 (369)
T ss_dssp             HCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECCSB
T ss_pred             cCCCceeeccccccccCCCcchHHHHHHHHHHHHHHCCCEEEEeCCCC
Confidence            346799999999854433233333333455666666689999999994

>d1v6ca_ c.41.1.1 (A:) Alkaline serine protease Apa1 {Pseudoalteromonas sp. AS-11 [TaxId: 247492]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Alkaline serine protease Apa1
species: Pseudoalteromonas sp. AS-11 [TaxId: 247492]

Probab=90.67  E-value=0.075  Score=38.50  Aligned_cols=53  Identities=13%  Similarity=0.098  Sum_probs=34.0

Q ss_pred             CcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097           7 NDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus         7 TD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      .++.+|-....+.+..+|-++|||....       ..+..++++.-++.|-++||+.||.
T Consensus       108 ~~~~~a~~~a~~~~~~~vin~S~g~~~~-------~~~~~~a~~~~~~~g~~~v~aaGN~  160 (435)
T d1v6ca_         108 SSLVAAIDTCVNSGGANVVTMSLGGSGS-------TTTERNALNTHYNNGVLLIAAAGNA  160 (435)
T ss_dssp             SCHHHHHHHHHHTTCCSEEEECCCBSCC-------BHHHHHHHHHHHHTTCEEEEECCSS
T ss_pred             hhhhhHHHHHhhcccceEEecccCCCCC-------CHHHHhhhhhccccceEEEEeccCC
Confidence            3444543333334567899999998532       2333455555555688999999994

>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp., AK.1 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Thermostable serine protease
species: Bacillus sp., AK.1 [TaxId: 1409]

Probab=89.66  E-value=0.071  Score=36.85  Aligned_cols=50  Identities=12%  Similarity=0.088  Sum_probs=32.2

Q ss_pred             HHHHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCC
Q psy2097          11 EARALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTK   67 (91)
Q Consensus        11 EA~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~   67 (91)
                      -++|+.|.. +.+||-++|||....       ......+++.-++.|-|+|+++||..
T Consensus       116 ~~~ai~~a~~~g~~iin~S~g~~~~-------~~~~~~a~~~a~~~gilvv~aaGn~g  166 (280)
T d1dbia_         116 IADAIIYAADSGAEVINLSLGCDCH-------TTTLENAVNYAWNKGSVVVAAAGNNG  166 (280)
T ss_dssp             HHHHHHHHHHTTCSEEEECCSSCCC-------CHHHHHHHHHHHHTTCEEEEECCBC-
T ss_pred             HHHHHHHHHHcCCcEeecccccccc-------chhHHHHHHHHHHCCEEEEEecCccC
Confidence            334444322 458999999998543       23334455555566899999999954

>d1t1ga_ c.41.1.2 (A:) Serine-carboxyl proteinase, SCP {Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Serine-carboxyl proteinase, SCP
domain: Serine-carboxyl proteinase, SCP
species: Bacillus novosp. MN-32, kumamolisin [TaxId: 198803]

Probab=88.90  E-value=0.044  Score=37.40  Aligned_cols=50  Identities=18%  Similarity=0.221  Sum_probs=31.3

Q ss_pred             HhccCCCcceeecCCCCCCCCCCccccChHHH--HHHHHhcCCCCeEEEEccCCC
Q psy2097          14 ALGLNINHIDIYSASWGPEDDGRTVDGPGPLL--MVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus        14 ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt--~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      ++....+.++|.++|||..++...   +....  ..+++.....|.++|+++||.
T Consensus       114 ~~~~~~~~~~Vin~S~G~~~~~~~---~~~~~~~~~~~~~~~~~g~~vv~aagn~  165 (357)
T d1t1ga_         114 AVHDPTHKPSIVSISWGGPEDSWA---PASIAAMNRAFLDAAALGVTVLAAAGDS  165 (357)
T ss_dssp             HHHCTTTCCSEEEECCCEEGGGSC---HHHHHHHHHHHHHHHHHTCEEEEECCSB
T ss_pred             HHHhhhcCCeEEecccccCcCccc---cchHHHHHHhhhhhccCCcEEEEEeccC
Confidence            455566789999999998654422   12221  122333333488999999994

>d1r6va_ c.41.1.1 (A:) Fervidolysin {Fervidobacterium pennivorans [TaxId: 93466]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Fervidolysin
species: Fervidobacterium pennivorans [TaxId: 93466]

Probab=87.39  E-value=0.074  Score=41.90  Aligned_cols=56  Identities=14%  Similarity=0.173  Sum_probs=38.3

Q ss_pred             cccCcHHHHHHhccCCC-cceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCC
Q psy2097           4 GVVNDAVEARALGLNIN-HIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVT   66 (91)
Q Consensus         4 g~vTD~~EA~ALsy~~~-~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg   66 (91)
                      +...+..-++++.|..+ .++|.++|||....       ......|++.-++.|.|.|+++||.
T Consensus       242 g~~~~~~i~~ai~~a~~~g~~Vin~S~g~~~~-------~~~~~~ai~~a~~~gv~vV~aAGN~  298 (671)
T d1r6va_         242 GYVGDDYVAAGIIWATDHGAKVMNHSWGGWGY-------SYTMKEAFDYAMEHGVVMVVSAGNN  298 (671)
T ss_dssp             SBCCHHHHHHHHHHHHHTTCSEEEECEEBSCC-------CHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred             CcccHHHHHHHHHHHHhCCCcEEecccccccC-------ChHHHHHHHHHHhccCcEEEEEecC
Confidence            44566666677766543 48999999986432       3344456666666689999999993

>d1r0re_ c.41.1.1 (E:) Subtilisin {Bacillus subtilis, carlsberg [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Subtilisin
species: Bacillus subtilis, carlsberg [TaxId: 1423]

Probab=85.84  E-value=0.14  Score=34.58  Aligned_cols=54  Identities=13%  Similarity=0.190  Sum_probs=32.5

Q ss_pred             CcHHHHHHhccCCCcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCc
Q psy2097           7 NDAVEARALGLNINHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKW   68 (91)
Q Consensus         7 TD~~EA~ALsy~~~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~   68 (91)
                      .++.+|-..... +.++|+++||+......       ....++.+-...+.|+||+.||...
T Consensus       104 ~~i~~ai~~a~~-~~~~i~n~S~~~~~~~~-------~~~~~~~~a~~~~~l~V~aaGN~g~  157 (274)
T d1r0re_         104 SGIVSGIEWATT-NGMDVINMSLGGASGST-------AMKQAVDNAYARGVVVVAAAGNSGN  157 (274)
T ss_dssp             HHHHHHHHHHHH-TTCSEEEECEEBSSCCH-------HHHHHHHHHHHTTCEEEEECCSCCC
T ss_pred             HHHHHHHHHHHh-cCCceeccccccccchh-------hhhHHHHHHhhCceEEEeeccCCCC
Confidence            444444333333 56899999998855432       2222333333447899999999543

>d1thma_ c.41.1.1 (A:) Thermitase {Thermoactinomyces vulgaris [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Thermitase
species: Thermoactinomyces vulgaris [TaxId: 2026]

Probab=84.35  E-value=0.28  Score=33.15  Aligned_cols=50  Identities=10%  Similarity=0.077  Sum_probs=32.3

Q ss_pred             HHhccCC-CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCcc
Q psy2097          13 RALGLNI-NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWS   69 (91)
Q Consensus        13 ~ALsy~~-~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s   69 (91)
                      +++.+.. +.++|.++|||....-       ....+++..-.+.+.+.|++.||....
T Consensus       117 ~ai~~~~~~~~~i~n~S~G~~~~~-------~~~~~a~~~a~~~~~~~v~aagn~g~~  167 (279)
T d1thma_         117 NGITYAADQGAKVISLSLGGTVGN-------SGLQQAVNYAWNKGSVVVAAAGNAGNT  167 (279)
T ss_dssp             HHHHHHHHTTCSEEEECCCBSSCC-------HHHHHHHHHHHHTTCEEEEECCSSSSC
T ss_pred             HHHHHHhhcCCceeccccCccccc-------hhHHHHHHHHHhcCceEEEeccccccC
Confidence            4444332 4589999999975433       223344555555688999999996543

>d1to2e_ c.41.1.1 (E:) Subtilisin {Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]}

class: Alpha and beta proteins (a/b)
fold: Subtilisin-like
superfamily: Subtilisin-like
family: Subtilases
domain: Subtilisin
species: Bacillus amyloliquefaciens, Novo/BPN' [TaxId: 1390]

Probab=81.80  E-value=0.29  Score=33.19  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=29.5

Q ss_pred             CcceeecCCCCCCCCCCccccChHHHHHHHHhcCCCCeEEEEccCCCCcc
Q psy2097          20 NHIDIYSASWGPEDDGRTVDGPGPLLMVQATEGFPRSHLYFIEPGVTKWS   69 (91)
Q Consensus        20 ~~idIYScSWGP~DdG~tvegP~~Lt~~al~~Gr~gGsIYVfa~GNg~~s   69 (91)
                      +.++|.++|||.++.-       .....++.+-+..|-++|+++||..-.
T Consensus       117 ~~~~v~n~S~g~~~~~-------~~~~~ai~~~~~~gil~V~aAGN~g~~  159 (281)
T d1to2e_         117 NNMDVINMSLGGPSGS-------AALKAAVDKAVASGVVVVAAAGNEGTS  159 (281)
T ss_dssp             TTCSEEEECEEBSCCC-------HHHHHHHHHHHHTTCEEEEECCSCCCC
T ss_pred             ccccccccccCCCcch-------HHHHHHHHHHHhcCCcceecccCcccC
Confidence            4589999999965433       222345555555589999999995433