Psyllid ID: psy2107

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-
Protein Sequence
MAEEENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEEEcccccEEEccEEEEEcccccccccHHHHHHHHcccccccccccEEEEEEEcccEEEEcHHHHHHHcccccccEEEEEEccccccccccccccccccEEEEEEcccEEEEEEcccEEEEEEccccEEEEEEcccccEEEEEEEcccccccEEEEccccccEEEEEcccccccEEEEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccccccccccccccEEEcccccEEEccccccccEEEcccccccEEEEEEcccccEEEEEccccEEEEEcccccEEEEEEccccEEEEEEcccccEEEEccccccEEEEcccccccEEEccccccccccEEEEEEccccccEEEEEEccccEEEEEcc
Secondary Structure Prediction (SSPRO)
cccEcccccccccccEEEEEEEEccccEEcccccEEEcccccHHHHHHHHHHHHHHHHccccccccEEEEEcccccEEEEEEEcccccEEEEcccccEEEEEccccccEEEEEcccccEEEEEEcccccEEcccccEEEEEEccccEEEEEccccccEEEEEEccccccccEEEEEccccEEEEEEcccccccccEEEEEEcccccEEEEEEcccccEEEEEccccEEEEEEcccccEEEEcccccEEEEEcccccEEEEEcccccEEEEEEcccccEEEEEEccccEEEEEccccEEEEEEcccccEEEEEEccccEEEEEEcccccEEEEEccccEEEEEEcccccccEEEEEEccccccEEEEEEccccccEEEEEccccEEEEEEcc
Coil and Loop (DISEMBL)
maeeentvetsdvpsevQLKFFtkqekyavpdlvfavqgnlgvpglnSLINEILKedsnednykdiqFDFLIAGELLRTSVTSFLeskgissenvidveylestptpspldcilhddwvsaidfhndwiltgcydhsvhiwtrrgehklnipghggpvkGVAWLYndgkdaafisvSTDQTAMIWEWKVESNSIECIHVCrghergletvTVSESRQQFATGGWDCLLKIWSAdiskergdpsengdegttskkrkkeyssassrtplitlkghKEAISAVQWTAVDEIITSSWDHTLKIWDAelggmkseivgnksffdvhysplSKLVITASadkqirlydpkvkegaiVKSTFSSHKEWVqsvrwspidpqlfvsasfdnsvklwdlr
Flexible Loop (DISEMBL)
maeeentvetsdvpsevQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFleskgissenvIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADiskergdpsengdegttskkrkkeyssassrtplitlkghkEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRwspidpqlfvsasfdnsvklwdlr
Low Complexity Region (SEG)
MAEEENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Disordered region (IsUnstruct)
*****************QLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD*********************************LITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW***
Disordered Region (DISOPRED)
*****NT****DVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE******************KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Disordered Region (DISEMBL)
*************PSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK***************************RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Disordered Region (DISPRO)
********ETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEEENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	391	2.2.26 [Sep-21-2011]
Q17BB0	427	Ribosome biogenesis prote	N/A	N/A	0.938	0.859	0.502	1e-114
B0W517	425	Ribosome biogenesis prote	N/A	N/A	0.948	0.872	0.5	1e-114
Q7QJ33	428	Ribosome biogenesis prote	yes	N/A	0.951	0.869	0.479	1e-112
B4KKN1	419	Ribosome biogenesis prote	N/A	N/A	0.938	0.875	0.479	1e-109
B4LS78	419	Ribosome biogenesis prote	N/A	N/A	0.938	0.875	0.484	1e-109
B4MU54	423	Ribosome biogenesis prote	N/A	N/A	0.928	0.858	0.484	1e-108
B4P116	420	Ribosome biogenesis prote	N/A	N/A	0.920	0.857	0.486	1e-107
B4JPT9	419	Ribosome biogenesis prote	N/A	N/A	0.938	0.875	0.476	1e-107
B3N534	420	Ribosome biogenesis prote	N/A	N/A	0.920	0.857	0.486	1e-107
Q9VKQ3	420	Ribosome biogenesis prote	yes	N/A	0.920	0.857	0.484	1e-107

>sp|Q17BB0|WDR12_AEDAE Ribosome biogenesis protein WDR12 homolog OS=Aedes aegypti GN=AAEL005041 PE=3 SV=1

 Score =  412 bits (1059), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 189/376 (50%), Positives = 269/376 (71%), Gaps = 9/376 (2%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           ++QL  +TKQ+++AVPD+ ++++ N+    LN LIN +LK+  N +  K ++FDFL+ GE
Sbjct: 12  QLQLHLYTKQKQFAVPDVPYSIRANVSNKELNVLINTLLKDSGNSEAGK-VEFDFLLNGE 70

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            ++  +   L+ + IS E+ +++EY+E  P P P DC+LHDDWVSA++  ++WILTGCYD
Sbjct: 71  FVKIPLGQHLKEREISFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEAKDNWILTGCYD 130

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           ++++IWT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V++NS+E
Sbjct: 131 NTLNIWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNVKANSVE 190

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+   R D    GD   ++ KR
Sbjct: 191 CVQVCKGHERGVDCIAANRSKTRMATGSWDTMLKIWSTDV---RND----GDSQPSTSKR 243

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
           +K   +  +RTP++TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+KSEI G+
Sbjct: 244 QK-LDTEKARTPVLTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSGIKSEICGH 302

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KSFFD+ YS L+ L+I AS DK +RLYDPK  +G IVK+T+  H +WVQSVRWS  +  L
Sbjct: 303 KSFFDLSYSHLNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYL 362

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN VKLWD R
Sbjct: 363 FVSGAYDNHVKLWDYR 378

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.
Aedes aegypti (taxid: 7159)

>sp|B0W517|WDR12_CULQU Ribosome biogenesis protein WDR12 homolog OS=Culex quinquefasciatus GN=CPIJ001500 PE=3 SV=2

 Score =  411 bits (1057), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/382 (50%), Positives = 268/382 (70%), Gaps = 11/382 (2%)

Query: 10  TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
           T     ++QL   TKQ+++AVPD+ ++++ N+    LN L+N +LK+  N +  K ++FD
Sbjct: 6   TGKAEGQLQLHLITKQKQFAVPDVPYSIRANVSTKELNVLVNTLLKDAGNAEAGK-VEFD 64

Query: 70  FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
           FL+ GE     +   L+ + +S E+ +++EY+E  P P P DC+LHDDWVSA++  ++WI
Sbjct: 65  FLLNGEF---PLGQHLKERDVSFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEARDNWI 121

Query: 130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
           LTGCYD+++++WT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V
Sbjct: 122 LTGCYDNTLNLWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNV 181

Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
            +NS+EC+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+    GD      E 
Sbjct: 182 AANSVECVQVCKGHERGVDCIAANGSKTKMATGSWDTMLKIWSTDVRSGGGD-----SEP 236

Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
           +TSK++K +  SA  RTPL+TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+K
Sbjct: 237 STSKRQKLDQGSA--RTPLMTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALNGIK 294

Query: 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
           SEI GNKSFFD+ YS L+ L+ITAS DK +RLYDPK  +G +VK+T+  H +WVQSVRWS
Sbjct: 295 SEISGNKSFFDLSYSKLNGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWS 354

Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
             +  LFVS ++DN VKLWD R
Sbjct: 355 TTNEYLFVSGAYDNHVKLWDYR 376

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Culex quinquefasciatus (taxid: 7176)

>sp|Q7QJ33|WDR12_ANOGA Ribosome biogenesis protein WDR12 homolog OS=Anopheles gambiae GN=AGAP007244 PE=3 SV=3

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 183/382 (47%), Positives = 265/382 (69%), Gaps = 10/382 (2%)

Query: 10  TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
           TS    ++Q+ F TKQ++YAVPD+ ++++ N+G   LN+L+  +LK+  N+   K + FD
Sbjct: 6   TSATEGQLQVHFTTKQKQYAVPDVPYSIRANVGCSELNTLLGTVLKDAGNKQGAK-VAFD 64

Query: 70  FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
           FL+ GE +R++++  L+ + IS E+ I++EY+E  P P P DC+LHDDWVSA+   + WI
Sbjct: 65  FLLNGEFVRSTLSQHLKERDISFEDTIELEYVERYPAPQPQDCLLHDDWVSAVQAKDGWI 124

Query: 130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
           LTG YD++V++W  +G+HKL IPGH   VKGVAW+  + +   F S S DQT MIWEW +
Sbjct: 125 LTGTYDNTVNLWNTKGKHKLTIPGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNM 184

Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
            +N+ EC+HVC+GHERG+  + V+ ++ Q A+G  D +LKIWS ++  ++G+PS      
Sbjct: 185 TTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMDTMLKIWSTELQADKGEPS------ 238

Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
             +KK K E  +   RTP++TL GH+E +S VQW     I T SWDHT+K+WD  +GG+K
Sbjct: 239 -ATKKAKLEQDNV--RTPVVTLAGHREFVSGVQWIDNTTIATCSWDHTIKLWDLSMGGIK 295

Query: 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
           +E  GNKSFFD+ YSPL+ ++ITAS DK +RLYDP+ K G  VK+T+  H +WVQ+ RWS
Sbjct: 296 TEFTGNKSFFDLSYSPLNGMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWS 355

Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
             +  LFVS ++DN VKLWD R
Sbjct: 356 TTNEYLFVSGAYDNRVKLWDYR 377

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Anopheles gambiae (taxid: 7165)

>sp|B4KKN1|WDR12_DROMO Ribosome biogenesis protein WDR12 homolog OS=Drosophila mojavensis GN=GI17814 PE=3 SV=1

 Score =  397 bits (1019), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 184/384 (47%), Positives = 260/384 (67%), Gaps = 17/384 (4%)

Query: 8   VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
           +E  +   +VQ+   TKQE+YAVPD+ +A++G++    LN  +N +L+    E     + 
Sbjct: 1   MEVENGEGQVQVHLKTKQEQYAVPDVPYAIEGSVSTTELNIFLNALLQNKGAES----VD 56

Query: 68  FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
           FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct: 57  FDFLVFDEYLRGRLCDHLREKAISFEDSIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 116

Query: 128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
           WILTGCYD++++IWT +G+HKL IPGH  P+K V W+  D ++  F+S S DQTAM+W+W
Sbjct: 117 WILTGCYDNTLNIWTYKGKHKLTIPGHTAPIKAVDWISLDNENGRFVSTSQDQTAMMWQW 176

Query: 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
            + SN++EC+ VC+GHERG+++V VS   Q+FATG WD +LKIWSA++           D
Sbjct: 177 NIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAELE----------D 226

Query: 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
            G ++ KR KE   +  RTP +TL+GH+E+ISAVQW   + ++T SWDHTLK+WD  L G
Sbjct: 227 AGESTAKRAKE---SGVRTPRMTLQGHRESISAVQWMDNNTLLTGSWDHTLKVWDLNLEG 283

Query: 308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
           +K+EI  NKS FD  +S L+ L++TASADK +RLYD +  +G++V+ST+  H  WVQ+V 
Sbjct: 284 IKTEISTNKSIFDASHSKLNNLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVM 343

Query: 368 WSPIDPQLFVSASFDNSVKLWDLR 391
           WS  +  LFVS ++DN  KLWD R
Sbjct: 344 WSITEEFLFVSGAYDNQNKLWDCR 367

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila mojavensis (taxid: 7230)

>sp|B4LS78|WDR12_DROVI Ribosome biogenesis protein WDR12 homolog OS=Drosophila virilis GN=GJ17641 PE=3 SV=1

 Score =  395 bits (1014), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/384 (48%), Positives = 258/384 (67%), Gaps = 17/384 (4%)

Query: 8   VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
           +E  +   +VQ+   TKQE YAVPD+ +A+ G++    LN  +N +L+    E     + 
Sbjct: 1   MEAENGEGQVQVHLKTKQEHYAVPDVPYAIDGSVSTTELNIFLNALLQSKGAEG----VD 56

Query: 68  FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
           FDFL+  E LR  +   L  K IS E+ ID+EY+E  P P P DC+LHDDWVSA+     
Sbjct: 57  FDFLVFDEYLRGRLCDHLREKAISFEDAIDIEYVERFPAPEPQDCLLHDDWVSAVKACGK 116

Query: 128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
           WILTGCYD++++IWT +G+HKL IPGH  P+K V W+  D ++  F+S S DQTAM+W+W
Sbjct: 117 WILTGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQW 176

Query: 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
            + SN++EC+ VC+GHERG+++V VS   Q+FATG WD +LKIWSA +        ++  
Sbjct: 177 NIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAGL--------DDTS 228

Query: 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
           EGT   KR KE   +  RTP +TL+GH+E+ISAVQW     ++T SWDHTLK+WD +L G
Sbjct: 229 EGTA--KRVKE---SGVRTPKMTLQGHRESISAVQWMDATTLVTGSWDHTLKVWDLQLEG 283

Query: 308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
           +K+EI  NKS FD  YS L++L++TASADK +RLYD +  +G++V++T+  H  WVQ+V 
Sbjct: 284 IKTEISTNKSIFDASYSKLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVM 343

Query: 368 WSPIDPQLFVSASFDNSVKLWDLR 391
           WS  +  LFVS S+D   KLWD R
Sbjct: 344 WSNTEEFLFVSGSYDTQNKLWDCR 367

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila virilis (taxid: 7244)

>sp|B4MU54|WDR12_DROWI Ribosome biogenesis protein WDR12 homolog OS=Drosophila willistoni GN=GK23981 PE=3 SV=1

 Score =  393 bits (1010), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 182/376 (48%), Positives = 256/376 (68%), Gaps = 13/376 (3%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L+  S +++   I FDFL+  E
Sbjct: 9   QVQVHLKTKQEHYAVPDVPYAIDGTMTTVELNTFLNALLRNKSGDESA--IDFDFLVFDE 66

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LR  +   L+ K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WILTGCYD
Sbjct: 67  YLRGRLCDHLKEKAISFEDAIEIEYVERFPAPQPQDCLLHDDWVSAVKVSGKWILTGCYD 126

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           ++++IWT +G+H L IPGH  P+K V W+  D     F+S S DQT M+W+W V+SN++E
Sbjct: 127 NTLNIWTHKGKHILTIPGHTAPIKAVDWISLDNDIGRFVSSSQDQTVMLWQWNVDSNAVE 186

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ +C+GHERG+++++VS    +FATG WD +LK+WSA      GD +        S KR
Sbjct: 187 CVSICKGHERGVDSISVSPDATRFATGSWDTMLKVWSAAEDDAGGDAA--------SSKR 238

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
            KE      RTP++TL+GH+E+ISAVQW     ++T+SWDHT+KIWD  L G+K+EI  N
Sbjct: 239 PKE---NGVRTPIMTLQGHRESISAVQWIDTSTLLTTSWDHTMKIWDLSLEGIKTEISTN 295

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KS FD  YS L++L++TASADK +RLYDP+  +G+IV++T+  H  WVQ+V WS  +  L
Sbjct: 296 KSIFDASYSNLNRLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEEFL 355

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN  KLWD R
Sbjct: 356 FVSGAYDNQNKLWDCR 371

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila willistoni (taxid: 7260)

>sp|B4P116|WDR12_DROYA Ribosome biogenesis protein WDR12 homolog OS=Drosophila yakuba GN=GE13328 PE=2 SV=1

 Score =  390 bits (1002), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/376 (48%), Positives = 256/376 (68%), Gaps = 16/376 (4%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  FDFL+  E
Sbjct: 9   QVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTDFDFLVFDE 65

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WIL+GCYD
Sbjct: 66  YLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGKWILSGCYD 125

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           +++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W V SNS+E
Sbjct: 126 NTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVE 185

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ VC+GHERG+++V+VS    +FATG WD +LK+WSA++        E+  EG  S KR
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEV--------EDAVEG--SSKR 235

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
            KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G+K+EI  N
Sbjct: 236 MKE---SGVRTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTN 292

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V WS  +  L
Sbjct: 293 KSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 352

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN  KLWD R
Sbjct: 353 FVSGAYDNQNKLWDCR 368

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila yakuba (taxid: 7245)

>sp|B4JPT9|WDR12_DROGR Ribosome biogenesis protein WDR12 homolog OS=Drosophila grimshawi GN=GH13339 PE=3 SV=1

 Score =  390 bits (1001), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/384 (47%), Positives = 259/384 (67%), Gaps = 17/384 (4%)

Query: 8   VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
           +E  +   +VQ+   TKQE YAVPD+ +A++G++    LN  +N +L+          + 
Sbjct: 1   MEAENGEGQVQVHLKTKQEHYAVPDVPYAIEGSVSTTELNIFLNALLQNKG----AASVD 56

Query: 68  FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
           FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct: 57  FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 116

Query: 128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
           WILTGCYD++++IWT +G+H L IPGH  P+K V WL  D  +  F+S S DQTAM+W+W
Sbjct: 117 WILTGCYDNTINIWTNKGKHILTIPGHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQW 176

Query: 188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
            ++SN+++C+ VC+GHER +++V VS   Q+FATG WD +LK+WSA++        E+  
Sbjct: 177 NIDSNAVDCVSVCKGHERSVDSVAVSPDAQRFATGSWDTMLKLWSAEL--------EDAV 228

Query: 248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
           EG  S KR KE   +  RTP +TL+GH+E+ISAVQW     ++T SWDHTLK+WD  L G
Sbjct: 229 EG--SAKRAKE---SGVRTPKMTLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDLNLEG 283

Query: 308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
           +K+EI  NKS FD ++S L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V 
Sbjct: 284 IKTEISTNKSIFDANFSKLNRLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVM 343

Query: 368 WSPIDPQLFVSASFDNSVKLWDLR 391
           WS  +  LFVS S+DN  KLWD R
Sbjct: 344 WSTTEEFLFVSGSYDNQNKLWDCR 367

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila grimshawi (taxid: 7222)

>sp|B3N534|WDR12_DROER Ribosome biogenesis protein WDR12 homolog OS=Drosophila erecta GN=GG10358 PE=3 SV=1

 Score =  389 bits (1000), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 183/376 (48%), Positives = 255/376 (67%), Gaps = 16/376 (4%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  FDFL+  E
Sbjct: 9   QVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTDFDFLVFDE 65

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WIL+GCYD
Sbjct: 66  YLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGKWILSGCYD 125

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           +++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W V SNS+E
Sbjct: 126 NTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVE 185

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ VC+GHERG+++V+VS    +FATG WD +LK+WSA+         E+  EG  S KR
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAE--------QEDAAEG--SSKR 235

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
            KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G+K+EI  N
Sbjct: 236 MKE---SGVRTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEGIKTEISTN 292

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V WS  +  L
Sbjct: 293 KSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 352

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN  KLWD R
Sbjct: 353 FVSGAYDNQNKLWDCR 368

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila erecta (taxid: 7220)

>sp|Q9VKQ3|WDR12_DROME Ribosome biogenesis protein WDR12 homolog OS=Drosophila melanogaster GN=CG6724 PE=2 SV=1

 Score =  389 bits (998), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 182/376 (48%), Positives = 256/376 (68%), Gaps = 16/376 (4%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  FDFL+  E
Sbjct: 9   QVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTDFDFLVFDE 65

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WIL+GCYD
Sbjct: 66  YLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGKWILSGCYD 125

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           +++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W V SNS+E
Sbjct: 126 NTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVE 185

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ VC+GHERG+++V+VS    +FATG WD +LK+WSA++        ++  EG  S KR
Sbjct: 186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEL--------DDAVEG--SSKR 235

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
            KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G+K+EI  N
Sbjct: 236 MKE---SGVRTPKITLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTN 292

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V WS  +  L
Sbjct: 293 KSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 352

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN  KLWD R
Sbjct: 353 FVSGAYDNQNKLWDCR 368

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
340712088	423	PREDICTED: ribosome biogenesis protein W	0.936	0.865	0.561	1e-124
345493565	422	PREDICTED: ribosome biogenesis protein W	0.959	0.888	0.534	1e-123
383861212	423	PREDICTED: ribosome biogenesis protein W	0.959	0.886	0.533	1e-121
380030452	423	PREDICTED: ribosome biogenesis protein W	0.961	0.888	0.542	1e-121
328783893	423	PREDICTED: ribosome biogenesis protein W	0.936	0.865	0.545	1e-120
157108390	427	wd-repeat protein [Aedes aegypti] gi|122	0.938	0.859	0.502	1e-112
226698191	425	RecName: Full=Ribosome biogenesis protei	0.948	0.872	0.5	1e-112
332025573	443	Ribosome biogenesis protein WDR12-like p	0.941	0.830	0.482	1e-110
118778288	428	AGAP007244-PA [Anopheles gambiae str. PE	0.951	0.869	0.479	1e-110
322800369	433	hypothetical protein SINV_04859 [Solenop	0.969	0.875	0.470	1e-110

>gi|340712088|ref|XP_003394596.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Bombus terrestris]

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 211/376 (56%), Positives = 276/376 (73%), Gaps = 10/376 (2%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ+KF TKQE+YAVPD   +V  ++    LN+L+NE+LKE +N  N  DI+FDFL+  +
Sbjct: 12  QVQIKFLTKQEQYAVPDFPLSVHTSIVTSELNTLVNELLKESTNIKN--DIEFDFLVCSQ 69

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LRTS++  +  K IS+E VI VEY+E  P P P DC+LHDDWVSA+D +  WILTGCYD
Sbjct: 70  FLRTSLSEHIAEKNISTEEVIIVEYVEKYPPPEPQDCLLHDDWVSAVDVYEKWILTGCYD 129

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           +++HIWT +G+H L IPGH  PVK VAW+      A+F+S S DQTA+IW+W +  NS++
Sbjct: 130 NTLHIWTSKGKHHLVIPGHTSPVKAVAWISLTSDTASFVSASQDQTAIIWDWNIMENSVD 189

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           CIHVCRGHERGLE V+++  +   ATG WD +LKIWS        +  EN D  ++SK+ 
Sbjct: 190 CIHVCRGHERGLEAVSINYDKTIMATGSWDTMLKIWST------ANQDENEDGESSSKRL 243

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
           K E+    +R P  T+KGHKEAIS V W+   EIITSSWDHT+KIWD+ELGG+K E+ GN
Sbjct: 244 KSEH--GKTRVPKRTMKGHKEAISGVVWSDKTEIITSSWDHTIKIWDSELGGIKHELAGN 301

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KSFFD+ YSPL++ VITASAD+ IRLYDP+  EG +VK+ F+SH +WVQSVRWSP+D  L
Sbjct: 302 KSFFDLDYSPLTRTVITASADRHIRLYDPRSTEGTLVKAIFTSHTQWVQSVRWSPVDETL 361

Query: 376 FVSASFDNSVKLWDLR 391
           F+S ++DN +KLWD R
Sbjct: 362 FISGAYDNEMKLWDTR 377

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345493565|ref|XP_001602606.2| PREDICTED: ribosome biogenesis protein WDR12 homolog [Nasonia vitripennis]

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 207/387 (53%), Positives = 279/387 (72%), Gaps = 12/387 (3%)

Query: 5   ENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYK 64
           +N    SD P ++Q++F TKQ++YAVPD   +V   + +  LN L+NE+LKE       +
Sbjct: 2   DNKNADSDTP-QIQIRFVTKQQQYAVPDYPLSVPATVIISELNVLVNELLKESGTVS--Q 58

Query: 65  DIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDF 124
           +++FDFL+  E LRTS+   +  +G+S E+VIDVEY+E  P P P DC++HDDWVSA+  
Sbjct: 59  EVEFDFLVCSEFLRTSLAEHIAERGVSIEDVIDVEYIEKHPPPEPQDCLIHDDWVSAVAV 118

Query: 125 HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184
              WILTGCYD+++H+WT +G+H L IPGH  P+K VAW+  DG++  F+S S DQTA++
Sbjct: 119 CEKWILTGCYDNTLHLWTAKGKHHLTIPGHSSPIKAVAWISLDGENGTFVSASQDQTAVL 178

Query: 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE 244
           W+W VESNS+E IH+C+GHERGLE V V+ +    ATG WD +LKIWS  +        +
Sbjct: 179 WKWNVESNSVESIHICKGHERGLEAVGVNTANNLMATGSWDTMLKIWSTSL-------QD 231

Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 304
           + +EG ++ KRKK  + + +R PL T+KGHKEA+S V WT   EI+TSSWDHTLK+WD E
Sbjct: 232 DTEEGESASKRKK--TESKTRVPLRTMKGHKEAVSGVVWTDKTEIVTSSWDHTLKVWDTE 289

Query: 305 LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ 364
           LGG+K E+ GNKSFFDV YSPLSK++I ASADK +RLYDP+  EGA+ KS F+SH +WVQ
Sbjct: 290 LGGIKHELAGNKSFFDVDYSPLSKVLIAASADKHVRLYDPRSTEGAVCKSMFTSHTQWVQ 349

Query: 365 SVRWSPIDPQLFVSASFDNSVKLWDLR 391
           SVRWS     LF+S ++DN+VKLWD R
Sbjct: 350 SVRWSTTQDHLFMSGAYDNNVKLWDTR 376

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383861212|ref|XP_003706080.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Megachile rotundata]

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 206/386 (53%), Positives = 279/386 (72%), Gaps = 11/386 (2%)

Query: 6   NTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKD 65
           NT   S  P ++Q++F TKQE+YAVPD   +V  ++    LN+L+NE+LKE ++  N  D
Sbjct: 3   NTSLNSSAP-QIQIRFITKQEQYAVPDFPLSVHTSIVSSELNTLVNELLKESTDIKN--D 59

Query: 66  IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH 125
           I+FDFLI  + LR S++  +  K IS+E VI+VEY+E  P P P DC++HDDWV+A+D  
Sbjct: 60  IEFDFLICSQFLRGSLSEHIAEKNISTEEVINVEYVEKYPPPEPQDCLIHDDWVAAVDVC 119

Query: 126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185
             WILTGCYD+++HIWT +G+H L IPGH  P+K VAW+  +   A+F+S S DQTA+IW
Sbjct: 120 EKWILTGCYDNTLHIWTSKGKHHLVIPGHTSPIKAVAWISLNNDTASFVSASQDQTAIIW 179

Query: 186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSEN 245
           +W +  NS++CIH+CRGHERGLE V+V+  +   ATG WD +LKIWS        +  EN
Sbjct: 180 DWNIVENSVDCIHICRGHERGLEAVSVNYDKTTIATGAWDTMLKIWST------SNQDEN 233

Query: 246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL 305
            D  +TSK+ K E+    +R P  T+KGHKEAIS+V W+   E+IT+SWDHT+K+WD+EL
Sbjct: 234 EDGESTSKRLKSEH--GKTRVPKRTMKGHKEAISSVVWSDKTELITASWDHTIKLWDSEL 291

Query: 306 GGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS 365
           GG+K E+ GNKSFFD+ YS LS+ +I ASAD+ IRLYDP+  EG +VKS F+SH +WVQS
Sbjct: 292 GGIKHELAGNKSFFDLDYSLLSRAIIAASADRHIRLYDPRSTEGTLVKSVFTSHTQWVQS 351

Query: 366 VRWSPIDPQLFVSASFDNSVKLWDLR 391
           VRWSP+D  LF+S ++DN +KLWD R
Sbjct: 352 VRWSPVDENLFISGAYDNDMKLWDTR 377

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030452|ref|XP_003698862.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Apis florea]

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 210/387 (54%), Positives = 278/387 (71%), Gaps = 11/387 (2%)

Query: 5   ENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYK 64
           +NT     VP ++Q+KF TKQ++YAVPD   +V  ++    LN+LINE+LKE S+  N  
Sbjct: 2   DNTNVNKSVP-QIQIKFLTKQKQYAVPDFPLSVHTSIVSNELNTLINELLKESSDIKN-- 58

Query: 65  DIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDF 124
           +I+FDFL+  + LRTS+   +  K IS+E+VI +EY+E  P P P DC++HDDWVSAI  
Sbjct: 59  EIEFDFLVCSQFLRTSLIEHITEKNISTEDVIIIEYVEKYPPPEPQDCLIHDDWVSAIAV 118

Query: 125 HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI 184
              WILTGCYD+++HIWT +G+H L IPGH  P+K VAW+      A+F+S S DQTA+I
Sbjct: 119 CEKWILTGCYDNTLHIWTCKGKHHLVIPGHTSPIKAVAWISLTNDTASFVSASQDQTAII 178

Query: 185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE 244
           W+W +  NS++CIHVCRGHERGLE V ++  +   ATG WD +LKIWS        +  E
Sbjct: 179 WDWNIMENSVDCIHVCRGHERGLEAVNINYDKTVMATGAWDTMLKIWST------ANQDE 232

Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE 304
           N D  +TSK+ K E+    +R P  T+KGHKEAIS V W+   EIITSSWDHT+KIWD+E
Sbjct: 233 NEDGESTSKRLKSEH--GKTRIPKRTMKGHKEAISGVVWSDKIEIITSSWDHTIKIWDSE 290

Query: 305 LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ 364
           LGG+K E+ GNKSFFD+ +SPLS  +ITASAD+ IRLYDP+  EG++VK+ F+SH +WVQ
Sbjct: 291 LGGIKHELTGNKSFFDLDFSPLSHTIITASADRHIRLYDPRSTEGSLVKAIFTSHTQWVQ 350

Query: 365 SVRWSPIDPQLFVSASFDNSVKLWDLR 391
           SVRWSPI   LF+S ++DN +KLWD+R
Sbjct: 351 SVRWSPIHENLFISGAYDNDMKLWDIR 377

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328783893|ref|XP_396848.3| PREDICTED: ribosome biogenesis protein WDR12 homolog [Apis mellifera]

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 205/376 (54%), Positives = 272/376 (72%), Gaps = 10/376 (2%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           +VQ++F TKQ++YAVPD   +V  ++    LN+LINE+LKE +N  N  +I+FDFL+  +
Sbjct: 12  QVQIRFLTKQKQYAVPDFPLSVHTSIVSNELNTLINELLKESNNIKN--EIEFDFLVCSQ 69

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            LRTS+   +  K IS+E+VI +EY+E  P P P DC++HDDWVSAI     WILTGCYD
Sbjct: 70  FLRTSLIEHITEKNISTEDVISIEYVEKYPPPEPQDCLIHDDWVSAIAVCEKWILTGCYD 129

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           +++HIWT +G+H L IPGH  P+K VAW+      A+F+S S DQTA+IW+W +  NS++
Sbjct: 130 NTLHIWTCKGKHHLVIPGHTSPIKAVAWISLTNDTASFVSASQDQTAIIWDWNIMENSVD 189

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           CIHVCRGHERGLE V ++  +   ATG WD +LKIWS        +  EN D  +TSK+ 
Sbjct: 190 CIHVCRGHERGLEAVNINYDKTIMATGAWDTMLKIWST------ANQDENEDGESTSKRL 243

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
           K E+    +R P  T+KGHKEAIS V W+   EIITSSWDHT+KIWD+ELGG+K E+ GN
Sbjct: 244 KSEH--GKTRIPKRTMKGHKEAISGVVWSDKIEIITSSWDHTIKIWDSELGGIKHELTGN 301

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KSFFD+ YSPLS  +ITASAD+ IRLYDP+  EG++VK+ F+SH +WVQS+RWSP+   L
Sbjct: 302 KSFFDLDYSPLSHTIITASADRHIRLYDPRSTEGSLVKAIFTSHTQWVQSIRWSPVHENL 361

Query: 376 FVSASFDNSVKLWDLR 391
           F+S ++DN +KLWD R
Sbjct: 362 FISGAYDNDMKLWDTR 377

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157108390|ref|XP_001650205.1| wd-repeat protein [Aedes aegypti] gi|122106389|sp|Q17BB0.1|WDR12_AEDAE RecName: Full=Ribosome biogenesis protein WDR12 homolog gi|108879311|gb|EAT43536.1| AAEL005041-PA [Aedes aegypti]

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/376 (50%), Positives = 269/376 (71%), Gaps = 9/376 (2%)

Query: 16  EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
           ++QL  +TKQ+++AVPD+ ++++ N+    LN LIN +LK+  N +  K ++FDFL+ GE
Sbjct: 12  QLQLHLYTKQKQFAVPDVPYSIRANVSNKELNVLINTLLKDSGNSEAGK-VEFDFLLNGE 70

Query: 76  LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
            ++  +   L+ + IS E+ +++EY+E  P P P DC+LHDDWVSA++  ++WILTGCYD
Sbjct: 71  FVKIPLGQHLKEREISFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEAKDNWILTGCYD 130

Query: 136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
           ++++IWT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V++NS+E
Sbjct: 131 NTLNIWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNVKANSVE 190

Query: 196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
           C+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+   R D    GD   ++ KR
Sbjct: 191 CVQVCKGHERGVDCIAANRSKTRMATGSWDTMLKIWSTDV---RND----GDSQPSTSKR 243

Query: 256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
           +K   +  +RTP++TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+KSEI G+
Sbjct: 244 QK-LDTEKARTPVLTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSGIKSEICGH 302

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           KSFFD+ YS L+ L+I AS DK +RLYDPK  +G IVK+T+  H +WVQSVRWS  +  L
Sbjct: 303 KSFFDLSYSHLNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYL 362

Query: 376 FVSASFDNSVKLWDLR 391
           FVS ++DN VKLWD R
Sbjct: 363 FVSGAYDNHVKLWDYR 378

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|226698191|sp|B0W517.2|WDR12_CULQU RecName: Full=Ribosome biogenesis protein WDR12 homolog

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 191/382 (50%), Positives = 268/382 (70%), Gaps = 11/382 (2%)

Query: 10  TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
           T     ++QL   TKQ+++AVPD+ ++++ N+    LN L+N +LK+  N +  K ++FD
Sbjct: 6   TGKAEGQLQLHLITKQKQFAVPDVPYSIRANVSTKELNVLVNTLLKDAGNAEAGK-VEFD 64

Query: 70  FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
           FL+ GE     +   L+ + +S E+ +++EY+E  P P P DC+LHDDWVSA++  ++WI
Sbjct: 65  FLLNGEF---PLGQHLKERDVSFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEARDNWI 121

Query: 130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
           LTGCYD+++++WT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V
Sbjct: 122 LTGCYDNTLNLWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNV 181

Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
            +NS+EC+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+    GD      E 
Sbjct: 182 AANSVECVQVCKGHERGVDCIAANGSKTKMATGSWDTMLKIWSTDVRSGGGD-----SEP 236

Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
           +TSK++K +  SA  RTPL+TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+K
Sbjct: 237 STSKRQKLDQGSA--RTPLMTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALNGIK 294

Query: 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
           SEI GNKSFFD+ YS L+ L+ITAS DK +RLYDPK  +G +VK+T+  H +WVQSVRWS
Sbjct: 295 SEISGNKSFFDLSYSKLNGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWS 354

Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
             +  LFVS ++DN VKLWD R
Sbjct: 355 TTNEYLFVSGAYDNHVKLWDYR 376

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332025573|gb|EGI65736.1| Ribosome biogenesis protein WDR12-like protein [Acromyrmex echinatior]

 Score =  405 bits (1042), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 182/377 (48%), Positives = 261/377 (69%), Gaps = 9/377 (2%)

Query: 15  SEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAG 74
           +++Q++F TKQ+++AVPD   +V  ++    LN+LINE+L+E +N    + ++FDFLI  
Sbjct: 30  TQIQIRFITKQQQFAVPDYPLSVHSSIITDELNTLINELLRESNNIQ--EQVEFDFLICS 87

Query: 75  ELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCY 134
           + LR S+   +  + IS+E+VIDVEY+E  P+P P DC++HDDWVSA+     WILTG Y
Sbjct: 88  QFLRNSLIEHITDREISTEDVIDVEYVEKHPSPEPKDCLIHDDWVSAVAVCGKWILTGSY 147

Query: 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194
           D+ +HIWT +G+H L IPGH  PV+ VAW+  +  +A+F+S S DQT MIW W +  NS+
Sbjct: 148 DNMLHIWTLKGKHHLVIPGHVSPVRAVAWISFNDDNASFVSASMDQTCMIWNWDITKNSV 207

Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254
           EC+++C+GH R +E V+++  +   ATG WD +L IWS           E+ ++G ++ K
Sbjct: 208 ECVYICKGHRRSIEAVSINYDKTLMATGAWDNMLYIWST-------STHEDDNDGESASK 260

Query: 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314
           R +   +  ++TP   +KGHK+AIS + W+   EIIT SWDHT+K WD EL G+K EI G
Sbjct: 261 RARSEYANKTKTPKCAMKGHKQAISGIVWSDKTEIITGSWDHTIKTWDTELNGIKQEIYG 320

Query: 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
           +K FFD+ YSPLS++VI  SAD+ +RLYDP+  EG IVK+ F+SH +WV SVRWS ID  
Sbjct: 321 DKCFFDIDYSPLSRVVIAGSADQHVRLYDPRSTEGTIVKARFTSHTQWVTSVRWSTIDEH 380

Query: 375 LFVSASFDNSVKLWDLR 391
           LF+S ++DN VKLWD R
Sbjct: 381 LFISGAYDNIVKLWDTR 397

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|118778288|ref|XP_308556.3| AGAP007244-PA [Anopheles gambiae str. PEST] gi|226698195|sp|Q7QJ33.3|WDR12_ANOGA RecName: Full=Ribosome biogenesis protein WDR12 homolog gi|116132311|gb|EAA04191.3| AGAP007244-PA [Anopheles gambiae str. PEST]

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/382 (47%), Positives = 265/382 (69%), Gaps = 10/382 (2%)

Query: 10  TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
           TS    ++Q+ F TKQ++YAVPD+ ++++ N+G   LN+L+  +LK+  N+   K + FD
Sbjct: 6   TSATEGQLQVHFTTKQKQYAVPDVPYSIRANVGCSELNTLLGTVLKDAGNKQGAK-VAFD 64

Query: 70  FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
           FL+ GE +R++++  L+ + IS E+ I++EY+E  P P P DC+LHDDWVSA+   + WI
Sbjct: 65  FLLNGEFVRSTLSQHLKERDISFEDTIELEYVERYPAPQPQDCLLHDDWVSAVQAKDGWI 124

Query: 130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
           LTG YD++V++W  +G+HKL IPGH   VKGVAW+  + +   F S S DQT MIWEW +
Sbjct: 125 LTGTYDNTVNLWNTKGKHKLTIPGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNM 184

Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
            +N+ EC+HVC+GHERG+  + V+ ++ Q A+G  D +LKIWS ++  ++G+PS      
Sbjct: 185 TTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMDTMLKIWSTELQADKGEPS------ 238

Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
             +KK K E  +   RTP++TL GH+E +S VQW     I T SWDHT+K+WD  +GG+K
Sbjct: 239 -ATKKAKLEQDNV--RTPVVTLAGHREFVSGVQWIDNTTIATCSWDHTIKLWDLSMGGIK 295

Query: 310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
           +E  GNKSFFD+ YSPL+ ++ITAS DK +RLYDP+ K G  VK+T+  H +WVQ+ RWS
Sbjct: 296 TEFTGNKSFFDLSYSPLNGMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWS 355

Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
             +  LFVS ++DN VKLWD R
Sbjct: 356 TTNEYLFVSGAYDNRVKLWDYR 377

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322800369|gb|EFZ21373.1| hypothetical protein SINV_04859 [Solenopsis invicta]

 Score =  403 bits (1036), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/389 (47%), Positives = 267/389 (68%), Gaps = 10/389 (2%)

Query: 3   EEENTVETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDN 62
           ++++ + T+   + +Q++F TKQE+YAVPD   +V  ++    LN LINE+L+E ++  N
Sbjct: 14  KDKSIMGTNKDEAHIQIRFITKQERYAVPDYPLSVHSSIITNELNILINELLRESNDIQN 73

Query: 63  YKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAI 122
              ++FDFL+  + LR+S+   +  +G+S+E VIDVEY+E  P+P P DC++HDDWVSA+
Sbjct: 74  --QVEFDFLVCSQFLRSSLIEHIAERGVSTEEVIDVEYVEKHPSPEPKDCLIHDDWVSAV 131

Query: 123 DFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA 182
                WILTG YD+ +HIWT +G+H L IPGH  PV+ VAW+  +   A+F+S S DQT 
Sbjct: 132 AVCGKWILTGSYDNMLHIWTLKGKHHLVIPGHVSPVRAVAWISLNDDSASFVSASMDQTC 191

Query: 183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP 242
           MIW W +  N +EC++VC+GH R +E V+V+  +   ATG WD +L IWS  + ++    
Sbjct: 192 MIWSWDITRNFVECVYVCKGHRRSIEAVSVNYDKTLMATGAWDNMLYIWSTSMQED---- 247

Query: 243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWD 302
               D+G ++ KR +   ++  +TP   +KGHK+AIS + W+   E+IT SWDHT+K WD
Sbjct: 248 ----DDGESASKRARSEYASKIKTPKSAMKGHKQAISGIVWSDKTEVITGSWDHTIKTWD 303

Query: 303 AELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW 362
            EL G+K EI G+K FFD+ YSPLS++VI  SAD+ +RLYDP+  EGAIVK+ F+SHK+W
Sbjct: 304 TELNGIKQEIHGDKCFFDIDYSPLSRVVIAGSADQHVRLYDPRSTEGAIVKARFTSHKQW 363

Query: 363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           V SVRWS ++  LF+S ++DN VK WD R
Sbjct: 364 VVSVRWSTVNEYLFISGAYDNIVKFWDTR 392

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	391
UNIPROTKB|Q17BB0	427	AAEL005041 "Ribosome biogenesi	0.953	0.873	0.497	7e-109
UNIPROTKB|B0W517	425	CPIJ001500 "Ribosome biogenesi	0.948	0.872	0.5	9e-109
UNIPROTKB|Q7QJ33	428	AGAP007244 "Ribosome biogenesi	0.951	0.869	0.479	2.8e-105
UNIPROTKB|B4LS78	419	GJ17641 "Ribosome biogenesis p	0.938	0.875	0.489	2.9e-103
UNIPROTKB|B4MU54	423	GK23981 "Ribosome biogenesis p	0.928	0.858	0.484	7.7e-103
UNIPROTKB|B4KKN1	419	GI17814 "Ribosome biogenesis p	0.938	0.875	0.479	1.3e-102
UNIPROTKB|B4P116	420	GE13328 "Ribosome biogenesis p	0.936	0.871	0.484	2.6e-102
UNIPROTKB|B3N534	420	GG10358 "Ribosome biogenesis p	0.936	0.871	0.484	4.2e-102
UNIPROTKB|B4JPT9	419	GH13339 "Ribosome biogenesis p	0.938	0.875	0.479	5.4e-102
FB|FBgn0032298	420	CG6724 [Drosophila melanogaste	0.920	0.857	0.484	8.8e-102

UNIPROTKB|Q17BB0 AAEL005041 "Ribosome biogenesis protein WDR12 homolog" [Aedes aegypti (taxid:7159)]

 Score = 1076 (383.8 bits), Expect = 7.0e-109, P = 7.0e-109
 Identities = 190/382 (49%), Positives = 271/382 (70%)

Query:    10 TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
             T     ++QL  +TKQ+++AVPD+ ++++ N+    LN LIN +LK+  N +  K ++FD
Sbjct:     6 TGKSEGQLQLHLYTKQKQFAVPDVPYSIRANVSNKELNVLINTLLKDSGNSEAGK-VEFD 64

Query:    70 FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
             FL+ GE ++  +   L+ + IS E+ +++EY+E  P P P DC+LHDDWVSA++  ++WI
Sbjct:    65 FLLNGEFVKIPLGQHLKEREISFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEAKDNWI 124

Query:   130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
             LTGCYD++++IWT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V
Sbjct:   125 LTGCYDNTLNIWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNV 184

Query:   190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
             ++NS+EC+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+  + GD      + 
Sbjct:   185 KANSVECVQVCKGHERGVDCIAANRSKTRMATGSWDTMLKIWSTDVRND-GD-----SQP 238

Query:   250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
             +TSK++K +   A  RTP++TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+K
Sbjct:   239 STSKRQKLDTEKA--RTPVLTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALSGIK 296

Query:   310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
             SEI G+KSFFD+ YS L+ L+I AS DK +RLYDPK  +G IVK+T+  H +WVQSVRWS
Sbjct:   297 SEICGHKSFFDLSYSHLNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWS 356

Query:   370 PIDPQLFVSASFDNSVKLWDLR 391
               +  LFVS ++DN VKLWD R
Sbjct:   357 TTNEYLFVSGAYDNHVKLWDYR 378

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B0W517 CPIJ001500 "Ribosome biogenesis protein WDR12 homolog" [Culex quinquefasciatus (taxid:7176)]

 Score = 1075 (383.5 bits), Expect = 9.0e-109, P = 9.0e-109
 Identities = 191/382 (50%), Positives = 268/382 (70%)

Query:    10 TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
             T     ++QL   TKQ+++AVPD+ ++++ N+    LN L+N +LK+  N +  K ++FD
Sbjct:     6 TGKAEGQLQLHLITKQKQFAVPDVPYSIRANVSTKELNVLVNTLLKDAGNAEAGK-VEFD 64

Query:    70 FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
             FL+ GE     +   L+ + +S E+ +++EY+E  P P P DC+LHDDWVSA++  ++WI
Sbjct:    65 FLLNGEF---PLGQHLKERDVSFEDTVELEYVERYPAPEPQDCLLHDDWVSAVEARDNWI 121

Query:   130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
             LTGCYD+++++WT +G+HKL IPGH  PVKGV W+  D +   F S S DQT M+WEW V
Sbjct:   122 LTGCYDNTLNLWTTKGKHKLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNV 181

Query:   190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
              +NS+EC+ VC+GHERG++ +  + S+ + ATG WD +LKIWS D+    GD      E 
Sbjct:   182 AANSVECVQVCKGHERGVDCIAANGSKTKMATGSWDTMLKIWSTDVRSGGGD-----SEP 236

Query:   250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
             +TSK++K +  SA  RTPL+TL GH+E IS VQW   + ++TSSWDHT+KIWD  L G+K
Sbjct:   237 STSKRQKLDQGSA--RTPLMTLAGHRECISGVQWIDDNTLVTSSWDHTIKIWDLALNGIK 294

Query:   310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
             SEI GNKSFFD+ YS L+ L+ITAS DK +RLYDPK  +G +VK+T+  H +WVQSVRWS
Sbjct:   295 SEISGNKSFFDLSYSKLNGLIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWS 354

Query:   370 PIDPQLFVSASFDNSVKLWDLR 391
               +  LFVS ++DN VKLWD R
Sbjct:   355 TTNEYLFVSGAYDNHVKLWDYR 376

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|Q7QJ33 AGAP007244 "Ribosome biogenesis protein WDR12 homolog" [Anopheles gambiae (taxid:7165)]

 Score = 1042 (371.9 bits), Expect = 2.8e-105, P = 2.8e-105
 Identities = 183/382 (47%), Positives = 265/382 (69%)

Query:    10 TSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFD 69
             TS    ++Q+ F TKQ++YAVPD+ ++++ N+G   LN+L+  +LK+  N+   K + FD
Sbjct:     6 TSATEGQLQVHFTTKQKQYAVPDVPYSIRANVGCSELNTLLGTVLKDAGNKQGAK-VAFD 64

Query:    70 FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWI 129
             FL+ GE +R++++  L+ + IS E+ I++EY+E  P P P DC+LHDDWVSA+   + WI
Sbjct:    65 FLLNGEFVRSTLSQHLKERDISFEDTIELEYVERYPAPQPQDCLLHDDWVSAVQAKDGWI 124

Query:   130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
             LTG YD++V++W  +G+HKL IPGH   VKGVAW+  + +   F S S DQT MIWEW +
Sbjct:   125 LTGTYDNTVNLWNTKGKHKLTIPGHVAAVKGVAWISLNEQTGVFASASHDQTIMIWEWNM 184

Query:   190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
              +N+ EC+HVC+GHERG+  + V+ ++ Q A+G  D +LKIWS ++  ++G+PS      
Sbjct:   185 TTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMDTMLKIWSTELQADKGEPS------ 238

Query:   250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK 309
               +KK K E  +   RTP++TL GH+E +S VQW     I T SWDHT+K+WD  +GG+K
Sbjct:   239 -ATKKAKLEQDNV--RTPVVTLAGHREFVSGVQWIDNTTIATCSWDHTIKLWDLSMGGIK 295

Query:   310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
             +E  GNKSFFD+ YSPL+ ++ITAS DK +RLYDP+ K G  VK+T+  H +WVQ+ RWS
Sbjct:   296 TEFTGNKSFFDLSYSPLNGMIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWS 355

Query:   370 PIDPQLFVSASFDNSVKLWDLR 391
               +  LFVS ++DN VKLWD R
Sbjct:   356 TTNEYLFVSGAYDNRVKLWDYR 377

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B4LS78 GJ17641 "Ribosome biogenesis protein WDR12 homolog" [Drosophila virilis (taxid:7244)]

 Score = 1023 (365.2 bits), Expect = 2.9e-103, P = 2.9e-103
 Identities = 188/384 (48%), Positives = 258/384 (67%)

Query:     8 VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
             +E  +   +VQ+   TKQE YAVPD+ +A+ G++    LN  +N +L+    E     + 
Sbjct:     1 MEAENGEGQVQVHLKTKQEHYAVPDVPYAIDGSVSTTELNIFLNALLQSKGAEG----VD 56

Query:    68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
             FDFL+  E LR  +   L  K IS E+ ID+EY+E  P P P DC+LHDDWVSA+     
Sbjct:    57 FDFLVFDEYLRGRLCDHLREKAISFEDAIDIEYVERFPAPEPQDCLLHDDWVSAVKACGK 116

Query:   128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
             WILTGCYD++++IWT +G+HKL IPGH  P+K V W+  D ++  F+S S DQTAM+W+W
Sbjct:   117 WILTGCYDNTINIWTNKGKHKLTIPGHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQW 176

Query:   188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
              + SN++EC+ VC+GHERG+++V VS   Q+FATG WD +LKIWSA +     D SE   
Sbjct:   177 NIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAGLD----DTSE--- 229

Query:   248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
              GT   KR KE   +  RTP +TL+GH+E+ISAVQW     ++T SWDHTLK+WD +L G
Sbjct:   230 -GTA--KRVKE---SGVRTPKMTLQGHRESISAVQWMDATTLVTGSWDHTLKVWDLQLEG 283

Query:   308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
             +K+EI  NKS FD  YS L++L++TASADK +RLYD +  +G++V++T+  H  WVQ+V 
Sbjct:   284 IKTEISTNKSIFDASYSKLNRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVM 343

Query:   368 WSPIDPQLFVSASFDNSVKLWDLR 391
             WS  +  LFVS S+D   KLWD R
Sbjct:   344 WSNTEEFLFVSGSYDTQNKLWDCR 367

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B4MU54 GK23981 "Ribosome biogenesis protein WDR12 homolog" [Drosophila willistoni (taxid:7260)]

 Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
 Identities = 182/376 (48%), Positives = 256/376 (68%)

Query:    16 EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
             +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L+  S +++   I FDFL+  E
Sbjct:     9 QVQVHLKTKQEHYAVPDVPYAIDGTMTTVELNTFLNALLRNKSGDESA--IDFDFLVFDE 66

Query:    76 LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
              LR  +   L+ K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WILTGCYD
Sbjct:    67 YLRGRLCDHLKEKAISFEDAIEIEYVERFPAPQPQDCLLHDDWVSAVKVSGKWILTGCYD 126

Query:   136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
             ++++IWT +G+H L IPGH  P+K V W+  D     F+S S DQT M+W+W V+SN++E
Sbjct:   127 NTLNIWTHKGKHILTIPGHTAPIKAVDWISLDNDIGRFVSSSQDQTVMLWQWNVDSNAVE 186

Query:   196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
             C+ +C+GHERG+++++VS    +FATG WD +LK+WSA       +    GD    S KR
Sbjct:   187 CVSICKGHERGVDSISVSPDATRFATGSWDTMLKVWSA------AEDDAGGD--AASSKR 238

Query:   256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
              KE      RTP++TL+GH+E+ISAVQW     ++T+SWDHT+KIWD  L G+K+EI  N
Sbjct:   239 PKENGV---RTPIMTLQGHRESISAVQWIDTSTLLTTSWDHTMKIWDLSLEGIKTEISTN 295

Query:   316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
             KS FD  YS L++L++TASADK +RLYDP+  +G+IV++T+  H  WVQ+V WS  +  L
Sbjct:   296 KSIFDASYSNLNRLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEEFL 355

Query:   376 FVSASFDNSVKLWDLR 391
             FVS ++DN  KLWD R
Sbjct:   356 FVSGAYDNQNKLWDCR 371

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B4KKN1 GI17814 "Ribosome biogenesis protein WDR12 homolog" [Drosophila mojavensis (taxid:7230)]

 Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
 Identities = 184/384 (47%), Positives = 260/384 (67%)

Query:     8 VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
             +E  +   +VQ+   TKQE+YAVPD+ +A++G++    LN  +N +L+    E     + 
Sbjct:     1 MEVENGEGQVQVHLKTKQEQYAVPDVPYAIEGSVSTTELNIFLNALLQNKGAES----VD 56

Query:    68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
             FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct:    57 FDFLVFDEYLRGRLCDHLREKAISFEDSIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 116

Query:   128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
             WILTGCYD++++IWT +G+HKL IPGH  P+K V W+  D ++  F+S S DQTAM+W+W
Sbjct:   117 WILTGCYDNTLNIWTYKGKHKLTIPGHTAPIKAVDWISLDNENGRFVSTSQDQTAMMWQW 176

Query:   188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
              + SN++EC+ VC+GHERG+++V VS   Q+FATG WD +LKIWSA++           D
Sbjct:   177 NIASNAVECVSVCKGHERGVDSVCVSPDAQRFATGSWDTMLKIWSAELE----------D 226

Query:   248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
              G ++ KR KE   +  RTP +TL+GH+E+ISAVQW   + ++T SWDHTLK+WD  L G
Sbjct:   227 AGESTAKRAKE---SGVRTPRMTLQGHRESISAVQWMDNNTLLTGSWDHTLKVWDLNLEG 283

Query:   308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
             +K+EI  NKS FD  +S L+ L++TASADK +RLYD +  +G++V+ST+  H  WVQ+V 
Sbjct:   284 IKTEISTNKSIFDASHSKLNNLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVM 343

Query:   368 WSPIDPQLFVSASFDNSVKLWDLR 391
             WS  +  LFVS ++DN  KLWD R
Sbjct:   344 WSITEEFLFVSGAYDNQNKLWDCR 367

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B4P116 GE13328 "Ribosome biogenesis protein WDR12 homolog" [Drosophila yakuba (taxid:7245)]

 Score = 1014 (362.0 bits), Expect = 2.6e-102, P = 2.6e-102
 Identities = 186/384 (48%), Positives = 259/384 (67%)

Query:     8 VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
             VE  +   +V LK  TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  
Sbjct:     3 VENGEGQVQVHLK--TKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTD 57

Query:    68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
             FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct:    58 FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 117

Query:   128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
             WIL+GCYD+++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W
Sbjct:   118 WILSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQW 177

Query:   188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
              V SNS+EC+ VC+GHERG+++V+VS    +FATG WD +LK+WSA++        E+  
Sbjct:   178 NVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEV--------EDAV 229

Query:   248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
             EG  S KR KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G
Sbjct:   230 EG--SSKRMKE---SGVRTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEG 284

Query:   308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
             +K+EI  NKS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V 
Sbjct:   285 IKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVM 344

Query:   368 WSPIDPQLFVSASFDNSVKLWDLR 391
             WS  +  LFVS ++DN  KLWD R
Sbjct:   345 WSTTEEFLFVSGAYDNQNKLWDCR 368

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B3N534 GG10358 "Ribosome biogenesis protein WDR12 homolog" [Drosophila erecta (taxid:7220)]

 Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
 Identities = 186/384 (48%), Positives = 258/384 (67%)

Query:     8 VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
             VE  +   +V LK  TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  
Sbjct:     3 VENGEGQVQVHLK--TKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTD 57

Query:    68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
             FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct:    58 FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 117

Query:   128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
             WIL+GCYD+++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W
Sbjct:   118 WILSGCYDNTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQW 177

Query:   188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
              V SNS+EC+ VC+GHERG+++V+VS    +FATG WD +LK+WSA+         E+  
Sbjct:   178 NVGSNSVECVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAE--------QEDAA 229

Query:   248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
             EG  S KR KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G
Sbjct:   230 EG--SSKRMKE---SGVRTPKITLQGHRESVSAVQWMDASTLLTGSWDHTLKVWDLSLEG 284

Query:   308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
             +K+EI  NKS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V 
Sbjct:   285 IKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVM 344

Query:   368 WSPIDPQLFVSASFDNSVKLWDLR 391
             WS  +  LFVS ++DN  KLWD R
Sbjct:   345 WSTTEEFLFVSGAYDNQNKLWDCR 368

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

UNIPROTKB|B4JPT9 GH13339 "Ribosome biogenesis protein WDR12 homolog" [Drosophila grimshawi (taxid:7222)]

 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 184/384 (47%), Positives = 261/384 (67%)

Query:     8 VETSDVPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQ 67
             +E  +   +VQ+   TKQE YAVPD+ +A++G++    LN  +N +L+   N+     + 
Sbjct:     1 MEAENGEGQVQVHLKTKQEHYAVPDVPYAIEGSVSTTELNIFLNALLQ---NK-GAASVD 56

Query:    68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND 127
             FDFL+  E LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     
Sbjct:    57 FDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKASGK 116

Query:   128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW 187
             WILTGCYD++++IWT +G+H L IPGH  P+K V WL  D  +  F+S S DQTAM+W+W
Sbjct:   117 WILTGCYDNTINIWTNKGKHILTIPGHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQW 176

Query:   188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD 247
              ++SN+++C+ VC+GHER +++V VS   Q+FATG WD +LK+WSA++        E+  
Sbjct:   177 NIDSNAVDCVSVCKGHERSVDSVAVSPDAQRFATGSWDTMLKLWSAEL--------EDAV 228

Query:   248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG 307
             EG  S KR KE   +  RTP +TL+GH+E+ISAVQW     ++T SWDHTLK+WD  L G
Sbjct:   229 EG--SAKRAKE---SGVRTPKMTLQGHRESISAVQWMDGTTLLTGSWDHTLKVWDLNLEG 283

Query:   308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR 367
             +K+EI  NKS FD ++S L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V 
Sbjct:   284 IKTEISTNKSIFDANFSKLNRLIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVM 343

Query:   368 WSPIDPQLFVSASFDNSVKLWDLR 391
             WS  +  LFVS S+DN  KLWD R
Sbjct:   344 WSTTEEFLFVSGSYDNQNKLWDCR 367

GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS

GO:0070545 "PeBoW complex" evidence=ISS

FB|FBgn0032298 CG6724 [Drosophila melanogaster (taxid:7227)]

 Score = 1009 (360.2 bits), Expect = 8.8e-102, P = 8.8e-102
 Identities = 182/376 (48%), Positives = 256/376 (68%)

Query:    16 EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
             +VQ+   TKQE YAVPD+ +A+ G +    LN+ +N +L++   +D   D  FDFL+  E
Sbjct:     9 QVQVHLKTKQEHYAVPDVPYAIDGTVTTVELNTFVNALLRQ---KDGSSDTDFDFLVFDE 65

Query:    76 LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYD 135
              LR  +   L  K IS E+ I++EY+E  P P P DC+LHDDWVSA+     WIL+GCYD
Sbjct:    66 YLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGKWILSGCYD 125

Query:   136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE 195
             +++++WT +G+H L I GH  P+K V W+  D +   F+S S DQTAM+W+W V SNS+E
Sbjct:   126 NTLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVE 185

Query:   196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR 255
             C+ VC+GHERG+++V+VS    +FATG WD +LK+WSA++        ++  EG  S KR
Sbjct:   186 CVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAEL--------DDAVEG--SSKR 235

Query:   256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN 315
              KE   +  RTP ITL+GH+E++SAVQW     ++T SWDHTLK+WD  L G+K+EI  N
Sbjct:   236 MKE---SGVRTPKITLQGHRESVSAVQWMDATTLLTGSWDHTLKVWDLSLEGIKTEISTN 292

Query:   316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
             KS FD  YS L++L++TASADK +RLYDP+  +G++V++T+  H  WVQ+V WS  +  L
Sbjct:   293 KSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFL 352

Query:   376 FVSASFDNSVKLWDLR 391
             FVS ++DN  KLWD R
Sbjct:   353 FVSGAYDNQNKLWDCR 368

GO:0022008 "neurogenesis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P91343	WDR12_CAEEL	No assigned EC number	0.3211	0.9462	0.8428	yes	N/A
Q6BLS5	YTM1_DEBHA	No assigned EC number	0.2781	0.9641	0.8090	yes	N/A
Q6NX08	WDR12_DANRE	No assigned EC number	0.4137	0.9488	0.8791	yes	N/A
Q5REE6	WDR12_PONAB	No assigned EC number	0.4221	0.9462	0.8747	yes	N/A
Q5BJ90	WDR12_XENTR	No assigned EC number	0.4244	0.9514	0.8794	yes	N/A
P61480	WDR12_RAT	No assigned EC number	0.4190	0.9514	0.8794	yes	N/A
Q9GZL7	WDR12_HUMAN	No assigned EC number	0.4248	0.9462	0.8747	yes	N/A
Q0VC24	WDR12_BOVIN	No assigned EC number	0.4274	0.9462	0.8747	yes	N/A
Q29KQ0	WDR12_DROPS	No assigned EC number	0.4893	0.9181	0.8568	yes	N/A
Q9VKQ3	WDR12_DROME	No assigned EC number	0.4840	0.9207	0.8571	yes	N/A
Q6CU59	YTM1_KLULA	No assigned EC number	0.2989	0.9309	0.8198	yes	N/A
A3LQ86	YTM1_PICST	No assigned EC number	0.2846	0.9641	0.8072	yes	N/A
Q7QJ33	WDR12_ANOGA	No assigned EC number	0.4790	0.9514	0.8691	yes	N/A
Q9JJA4	WDR12_MOUSE	No assigned EC number	0.4168	0.9462	0.8747	yes	N/A
Q17BB0	WDR12_AEDAE	No assigned EC number	0.5026	0.9386	0.8594	N/A	N/A
Q756D0	YTM1_ASHGO	No assigned EC number	0.2938	0.9156	0.8044	yes	N/A
Q9URY0	YTM1_SCHPO	No assigned EC number	0.3012	0.9335	0.8295	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	391
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	3e-40
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	5e-34
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	2e-32
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	1e-21
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-21
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	2e-19
pfam08154	64	pfam08154, NLE, NLE (NUC135) domain	1e-15
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	4e-08
COG2319	466	COG2319, COG2319, FOG: WD40 repeat [General functi	1e-06
smart00320	40	smart00320, WD40, WD40 repeats	2e-06
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-06
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	2e-05
smart00320	40	smart00320, WD40, WD40 repeats	7e-05
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	1e-04
smart00320	40	smart00320, WD40, WD40 repeats	2e-04
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	2e-04
PLN00181	793	PLN00181, PLN00181, protein SPA1-RELATED; Provisio	2e-04
PTZ00420	568	PTZ00420, PTZ00420, coronin; Provisional	4e-04
cd00200	289	cd00200, WD40, WD40 domain, found in a number of e	0.001
smart00320	40	smart00320, WD40, WD40 repeats	0.001
pfam00400	39	pfam00400, WD40, WD domain, G-beta repeat	0.001

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  144 bits (364), Expect = 3e-40
 Identities = 71/282 (25%), Positives = 124/282 (43%), Gaps = 45/282 (15%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   V+ + F  D   + TG  D ++ +W    GE    + GH GPV+ VA   +     
Sbjct: 8   HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTY-- 65

Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
              S S+D+T  +W+      + EC+    GH   + +V  S   +  ++   D  +K+W
Sbjct: 66  -LASGSSDKTIRLWDL----ETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVW 120

Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIIT 291
             +                             +   L TL+GH + +++V ++     + 
Sbjct: 121 DVE-----------------------------TGKCLTTLRGHTDWVNSVAFSPDGTFVA 151

Query: 292 -SSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLSKLVITASADKQIRLYDPKVKEG 349
            SS D T+K+WD   G   + + G+      V +SP  + ++++S+D  I+L+D     G
Sbjct: 152 SSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS--TG 209

Query: 350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
             +  T   H+  V SV +SP D  L  S S D ++++WDLR
Sbjct: 210 KCLG-TLRGHENGVNSVAFSP-DGYLLASGSEDGTIRVWDLR 249

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  127 bits (321), Expect = 5e-34
 Identities = 68/280 (24%), Positives = 118/280 (42%), Gaps = 45/280 (16%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLN-IPGHGGPVKGVAWLYNDGKDA 171
           H   V  +    D  ++ +G  D ++ +W       +  + GH   V  VA+   DG+  
Sbjct: 50  HTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFS-PDGR-- 106

Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
              S S D+T  +W+      + +C+   RGH   + +V  S      A+   D  +K+W
Sbjct: 107 ILSSSSRDKTIKVWDV----ETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLW 162

Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEII 290
                K                              + TL GH   +++V ++   ++++
Sbjct: 163 DLRTGK-----------------------------CVATLTGHTGEVNSVAFSPDGEKLL 193

Query: 291 TSSWDHTLKIWDAELGGMKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG 349
           +SS D T+K+WD   G     + G       V +SP   L+ + S D  IR++D  ++ G
Sbjct: 194 SSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWD--LRTG 251

Query: 350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
             V+ T S H   V S+ WSP D +   S S D ++++WD
Sbjct: 252 ECVQ-TLSGHTNSVTSLAWSP-DGKRLASGSADGTIRIWD 289

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score =  123 bits (310), Expect = 2e-32
 Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 42/243 (17%)

Query: 151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210
           + GH G V  VA+  +        + S D T  +W+ +      E +   +GH   +  V
Sbjct: 5   LKGHTGGVTCVAFSPDGKL---LATGSGDGTIKVWDLETG----ELLRTLKGHTGPVRDV 57

Query: 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270
             S      A+G  D  +++W  D+                                + T
Sbjct: 58  AASADGTYLASGSSDKTIRLW--DLETGE---------------------------CVRT 88

Query: 271 LKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLSK 328
           L GH   +S+V ++    I+ +SS D T+K+WD E G   + + G+  +   V +SP   
Sbjct: 89  LTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGT 148

Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
            V ++S D  I+L+D  ++ G  V  T + H   V SV +SP D +  +S+S D ++KLW
Sbjct: 149 FVASSSQDGTIKLWD--LRTGKCVA-TLTGHTGEVNSVAFSP-DGEKLLSSSSDGTIKLW 204

Query: 389 DLR 391
           DL 
Sbjct: 205 DLS 207

Length = 289

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 93.6 bits (233), Expect = 1e-21
 Identities = 41/124 (33%), Positives = 67/124 (54%), Gaps = 6/124 (4%)

Query: 270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLS 327
           TLKGH   ++ V ++   + + T S D T+K+WD E G +   + G+     DV  S   
Sbjct: 4   TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADG 63

Query: 328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL 387
             + + S+DK IRL+D +  E      T + H  +V SV +SP D ++  S+S D ++K+
Sbjct: 64  TYLASGSSDKTIRLWDLETGE---CVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKV 119

Query: 388 WDLR 391
           WD+ 
Sbjct: 120 WDVE 123

Length = 289

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 95.5 bits (236), Expect = 2e-21
 Identities = 83/321 (25%), Positives = 132/321 (41%), Gaps = 44/321 (13%)

Query: 80  SVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND--WILTGCYDHS 137
           S+ S   S+       +  + L S P  S L    H+D +++I F  D   +L+G  D +
Sbjct: 29  SLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDGELLLSGSSDGT 88

Query: 138 VHIWTRRGEHKLNI---PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI 194
           + +W      KL       H   V  +A    DG      S S D T  +W+    S   
Sbjct: 89  IKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDL---STPG 145

Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSK 253
           + I    GH   + ++  S   +  A+G   D  +K+W     K                
Sbjct: 146 KLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGK---------------- 189

Query: 254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKSE 311
                        PL TL GH + +S++ ++      I + S D T+++WD   G +   
Sbjct: 190 -------------PLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRS 236

Query: 312 IVGNKSFFDVH-YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP 370
            +   S   V  +SP   L+ + S+D  IRL+D  ++  + +  T S H   V SV +SP
Sbjct: 237 TLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWD--LRSSSSLLRTLSGHSSSVLSVAFSP 294

Query: 371 IDPQLFVSASFDNSVKLWDLR 391
            D +L  S S D +V+LWDL 
Sbjct: 295 -DGKLLASGSSDGTVRLWDLE 314

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 89.4 bits (220), Expect = 2e-19
 Identities = 67/282 (23%), Positives = 117/282 (41%), Gaps = 41/282 (14%)

Query: 115 HDDWVSAIDFHND---WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H D VS++ F  D    I +G  D ++ +W       L     G     V+    DG   
Sbjct: 197 HTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSL- 255

Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
              S S+D T  +W+ +  S+    +    GH   + +V  S   +  A+G  D  +++W
Sbjct: 256 -LASGSSDGTIRLWDLRSSSS---LLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLW 311

Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIIT 291
             +  K                               +TLKGH+  +S++ ++    ++ 
Sbjct: 312 DLETGKLL---------------------------SSLTLKGHEGPVSSLSFSPDGSLLV 344

Query: 292 S--SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG 349
           S  S D T+++WD   G     + G+ +   V +SP  ++V + S D  +RL+D      
Sbjct: 345 SGGSDDGTIRLWDLRTGKPLKTLEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLSTGS- 403

Query: 350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
             +      H   V S+ +SP D +   S S DN+++LWDL+
Sbjct: 404 --LLRNLDGHTSRVTSLDFSP-DGKSLASGSSDNTIRLWDLK 442

Length = 466

>gnl|CDD|219730 pfam08154, NLE, NLE (NUC135) domain

 Score = 70.6 bits (174), Expect = 1e-15
 Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 6/70 (8%)

Query: 16 EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGE 75
          +VQ++F T++  Y VP   F V  NL   GL+ L+N++L+ +      + + FDFLI GE
Sbjct: 1  QVQVQFVTEEGDYEVPGTPFLVPTNLTRDGLSELLNQLLENE------EPVPFDFLINGE 54

Query: 76 LLRTSVTSFL 85
           LRTS+  +L
Sbjct: 55 ELRTSLDEYL 64

This domain is located N terminal to WD40 repeats. It is found in the microtubule-associated yeast protein YTM1. Length = 64

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 54.7 bits (130), Expect = 4e-08
 Identities = 34/169 (20%), Positives = 69/169 (40%), Gaps = 5/169 (2%)

Query: 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
                  ++        + + G        +   +      + L+GH+++I+++ ++   
Sbjct: 18  KSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITSIAFSPDG 77

Query: 288 EII-TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY----SPLSKLVITASADKQIRLY 342
           E++ + S D T+K+WD + G    + +       V      SP    ++ AS+     + 
Sbjct: 78  ELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVK 137

Query: 343 DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
              +     +  T   H E V S+ +SP    L   +S D ++KLWDLR
Sbjct: 138 LWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLR 186

Length = 466

>gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only]

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 91  SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDW---ILTGCYDHSVHIWTRRGEH 147
           SS+  + +  LE+    S L    H+  VS++ F  D    +  G  D ++ +W  R   
Sbjct: 303 SSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362

Query: 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL 207
            L        V  V++  +        S STD T  +W+     ++   +    GH   +
Sbjct: 363 PLKTLEGHSNVLSVSFSPDGRV---VSSGSTDGTVRLWDL----STGSLLRNLDGHTSRV 415

Query: 208 ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252
            ++  S   +  A+G  D  +++W    S +    S +G    + 
Sbjct: 416 TSLDFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPDGKVLASK 460

Length = 466

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
           +  T   H   V SV +SP D +   S S D ++KLWD
Sbjct: 4   LLKTLKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
           T   H   V SV +SP D  L  S S D +V++WD
Sbjct: 6   TLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 19/140 (13%)

Query: 265 RTPLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVH 322
           + P   LKGHK+ IS + W  ++  I  +S +D  + IWD E      +I   K    + 
Sbjct: 115 KDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLK 174

Query: 323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-------WVQSVRWSPIDPQL 375
           ++    L+      K + + DP+ +E   + S+F  H         W+  +     D   
Sbjct: 175 WNIKGNLLSGTCVGKHMHIIDPRKQE---IASSFHIHDGGKNTKNIWIDGLGG---DDNY 228

Query: 376 FVSASFDNS----VKLWDLR 391
            +S  F  +    +KLWDL+
Sbjct: 229 ILSTGFSKNNMREMKLWDLK 248

Length = 568

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 264 SRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 302
           S   L TLKGH   +++V ++   + + + S D T+K+WD
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.9 bits (91), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 265 RTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 302
              L TLKGH   +++V ++     + + S D T+++WD
Sbjct: 1   GKLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 38.4 bits (90), Expect = 2e-04
 Identities = 11/40 (27%), Positives = 19/40 (47%)

Query: 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
           S E +   +GH   + +V  S   +  A+G  D  +K+W 
Sbjct: 1   SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 38.1 bits (89), Expect = 2e-04
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
           + +   +GH   + +V  S      A+G  D  +++W 
Sbjct: 2   KLLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39

Length = 39

>gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional

 Score = 43.2 bits (101), Expect = 2e-04
 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 8/131 (6%)

Query: 264 SRTPLIT-LKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGGMKSEIVGNKSFFD 320
           +R+ L+T +K H++ + ++ +++ D  + +S   D ++K+W    G     I    +   
Sbjct: 563 ARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICC 622

Query: 321 VHY-SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
           V + S   + +   SAD ++  YD  ++   +   T   H + V  VR+  +D    VS+
Sbjct: 623 VQFPSESGRSLAFGSADHKVYYYD--LRNPKLPLCTMIGHSKTVSYVRF--VDSSTLVSS 678

Query: 380 SFDNSVKLWDL 390
           S DN++KLWDL
Sbjct: 679 STDNTLKLWDL 689

Length = 793

>gnl|CDD|240412 PTZ00420, PTZ00420, coronin; Provisional

 Score = 42.2 bits (99), Expect = 4e-04
 Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 6/80 (7%)

Query: 317 SFFDVHYSP-LSKLVITASADKQIRLY-----DPKVKEGAIVKSTFSSHKEWVQSVRWSP 370
           S  D+ ++P  S+++ + S D  IR++     D  VKE    +     HK+ +  + W+P
Sbjct: 76  SILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNP 135

Query: 371 IDPQLFVSASFDNSVKLWDL 390
           ++  +  S+ FD+ V +WD+
Sbjct: 136 MNYYIMCSSGFDSFVNIWDI 155

Length = 568

>gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           + T   H   V  V +SP D +L  + S D ++K+WDL
Sbjct: 2   RRTLKGHTGGVTCVAFSP-DGKLLATGSGDGTIKVWDL 38

Length = 289

>gnl|CDD|197651 smart00320, WD40, WD40 repeats

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 7/29 (24%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW 141
           H   V+++ F  D  ++ +G  D ++ +W
Sbjct: 11  HTGPVTSVAFSPDGKYLASGSDDGTIKLW 39

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40

>gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat

 Score = 35.8 bits (83), Expect = 0.001
 Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW 141
           H   V+++ F  D   + +G  D +V +W
Sbjct: 10  HTGPVTSVAFSPDGNLLASGSDDGTVRVW 38

Length = 39

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	391
KOG0313|consensus	423		100.0
KOG0271|consensus	480		100.0
KOG0271|consensus	480		100.0
KOG0272|consensus	459		100.0
KOG0272|consensus	459		100.0
KOG0286|consensus	343		100.0
KOG0263|consensus	707		100.0
KOG0279|consensus	315		100.0
KOG0279|consensus	315		100.0
KOG0273|consensus	524		100.0
KOG0285|consensus	460		100.0
KOG0295|consensus	406		100.0
KOG0645|consensus	312		100.0
KOG0281|consensus	499		100.0
KOG0295|consensus	406		100.0
KOG0281|consensus	499		100.0
KOG0284|consensus	464		100.0
KOG0316|consensus	307		100.0
KOG0273|consensus	524		100.0
KOG0282|consensus	503		100.0
KOG0284|consensus	464		100.0
KOG0263|consensus	707		100.0
KOG0265|consensus	338		100.0
KOG0266|consensus	456		100.0
KOG0277|consensus	311		100.0
KOG0315|consensus	311		100.0
KOG0286|consensus	343		100.0
KOG0296|consensus	399		100.0
KOG0291|consensus	893		100.0
KOG0319|consensus	775		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0276|consensus	794		100.0
KOG0315|consensus	311		100.0
KOG0266|consensus	456		100.0
KOG0293|consensus	519		100.0
KOG0319|consensus	775		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0278|consensus	334		100.0
KOG0291|consensus	893		100.0
KOG0318|consensus	603		100.0
KOG0276|consensus	794		100.0
KOG0305|consensus	484		100.0
cd00200	289	WD40 WD40 domain, found in a number of eukaryotic	100.0
KOG0292|consensus	1202		100.0
KOG0643|consensus	327		100.0
KOG0274|consensus	537		100.0
KOG0645|consensus	312		100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG0294|consensus	362		100.0
KOG0285|consensus	460		100.0
KOG0265|consensus	338		100.0
KOG0277|consensus	311		100.0
KOG0296|consensus	399		100.0
KOG0275|consensus	508		100.0
KOG0316|consensus	307		100.0
KOG0264|consensus	422		99.98
PTZ00420	568	coronin; Provisional	99.98
KOG0318|consensus	603		99.98
KOG1332|consensus	299		99.98
KOG0292|consensus	1202		99.98
PTZ00421	493	coronin; Provisional	99.98
KOG0283|consensus	712		99.98
KOG0274|consensus	537		99.97
KOG1407|consensus	313		99.97
KOG0313|consensus	423		99.97
KOG0640|consensus	430		99.97
KOG0306|consensus	888		99.97
KOG0288|consensus	459		99.97
PTZ00421	493	coronin; Provisional	99.97
KOG0310|consensus	487		99.97
KOG0308|consensus	735		99.97
KOG0301|consensus	745		99.97
KOG0310|consensus	487		99.97
KOG0772|consensus	641		99.97
KOG0289|consensus	506		99.97
PTZ00420	568	coronin; Provisional	99.97
KOG0641|consensus	350		99.97
KOG1446|consensus	311		99.97
KOG0641|consensus	350		99.96
KOG0306|consensus	888		99.96
KOG0268|consensus	433		99.96
KOG0293|consensus	519		99.96
KOG0646|consensus	476		99.96
KOG0299|consensus	479		99.96
KOG1036|consensus	323		99.96
KOG0300|consensus	481		99.96
KOG2445|consensus	361		99.96
KOG0282|consensus	503		99.96
KOG0283|consensus	712		99.96
KOG0973|consensus	942		99.96
KOG0269|consensus	839		99.96
KOG0301|consensus	745		99.96
KOG0647|consensus	347		99.96
KOG0299|consensus	479		99.96
KOG0275|consensus	508		99.96
KOG1332|consensus	299		99.96
KOG0308|consensus	735		99.96
KOG0300|consensus	481		99.96
KOG0973|consensus	942		99.96
KOG0264|consensus	422		99.95
KOG0772|consensus	641		99.95
KOG0302|consensus	440		99.95
KOG0647|consensus	347		99.95
KOG0289|consensus	506		99.95
KOG0643|consensus	327		99.95
KOG2096|consensus	420		99.95
KOG0268|consensus	433		99.95
KOG0302|consensus	440		99.94
KOG0639|consensus	705		99.94
KOG1408|consensus	1080		99.94
KOG1407|consensus	313		99.94
KOG4283|consensus	397		99.94
KOG0278|consensus	334		99.94
KOG0640|consensus	430		99.94
KOG1036|consensus	323		99.94
KOG0267|consensus	825		99.94
KOG0305|consensus	484		99.94
KOG1274|consensus	933		99.94
KOG1274|consensus	933		99.93
KOG0321|consensus	720		99.93
KOG0646|consensus	476		99.93
KOG0269|consensus	839		99.93
KOG0639|consensus	705		99.93
KOG0270|consensus	463		99.93
KOG0267|consensus	825		99.93
KOG2048|consensus	691		99.93
KOG0294|consensus	362		99.93
KOG0307|consensus	1049		99.93
KOG1539|consensus	910		99.92
KOG2445|consensus	361		99.92
KOG1034|consensus	385		99.92
KOG1446|consensus	311		99.92
KOG2106|consensus	626		99.91
KOG4378|consensus	673		99.91
KOG4328|consensus	498		99.91
KOG1408|consensus	1080		99.91
KOG4283|consensus	397		99.91
KOG0270|consensus	463		99.91
KOG2055|consensus	514		99.91
KOG0288|consensus	459		99.91
KOG2096|consensus	420		99.9
KOG0650|consensus	733		99.9
KOG1063|consensus	764		99.9
KOG2048|consensus	691		99.9
KOG1273|consensus	405		99.9
KOG4328|consensus	498		99.9
KOG2106|consensus	626		99.9
KOG0322|consensus	323		99.89
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.89
KOG4378|consensus	673		99.89
KOG0290|consensus	364		99.89
KOG0642|consensus	577		99.89
KOG0321|consensus	720		99.88
KOG1539|consensus	910		99.88
KOG0303|consensus	472		99.88
KOG1188|consensus	376		99.87
KOG1007|consensus	370		99.87
TIGR03866	300	PQQ_ABC_repeats PQQ-dependent catabolism-associate	99.87
KOG0307|consensus	1049		99.87
KOG0649|consensus	325		99.86
KOG1587|consensus	555		99.86
KOG1445|consensus	1012		99.86
KOG1009|consensus	434		99.86
KOG1063|consensus	764		99.86
KOG1007|consensus	370		99.85
KOG2919|consensus	406		99.85
KOG1273|consensus	405		99.84
KOG4227|consensus	609		99.84
KOG0303|consensus	472		99.84
KOG1538|consensus	1081		99.84
KOG1034|consensus	385		99.83
COG2319	466	FOG: WD40 repeat [General function prediction only	99.83
KOG0644|consensus	1113		99.83
KOG2055|consensus	514		99.82
KOG1587|consensus	555		99.81
KOG2919|consensus	406		99.81
KOG2394|consensus	636		99.8
KOG0649|consensus	325		99.8
KOG0650|consensus	733		99.8
KOG1523|consensus	361		99.79
KOG0771|consensus	398		99.79
KOG0290|consensus	364		99.78
KOG1517|consensus	1387		99.78
COG2319	466	FOG: WD40 repeat [General function prediction only	99.77
KOG1445|consensus	1012		99.77
PRK11028	330	6-phosphogluconolactonase; Provisional	99.76
KOG1310|consensus	758		99.75
KOG1334|consensus	559		99.75
KOG1524|consensus	737		99.75
KOG1188|consensus	376		99.75
KOG1240|consensus	1431		99.75
KOG1009|consensus	434		99.74
KOG2110|consensus	391		99.74
PRK01742	429	tolB translocation protein TolB; Provisional	99.74
KOG1517|consensus	1387		99.74
KOG1310|consensus	758		99.72
KOG1523|consensus	361		99.72
PRK01742	429	tolB translocation protein TolB; Provisional	99.72
KOG0322|consensus	323		99.72
PRK11028	330	6-phosphogluconolactonase; Provisional	99.71
KOG1538|consensus	1081		99.71
KOG1963|consensus	792		99.71
KOG1240|consensus	1431		99.7
KOG1963|consensus	792		99.7
KOG2139|consensus	445		99.7
KOG1524|consensus	737		99.69
KOG2110|consensus	391		99.69
KOG3881|consensus	412		99.68
KOG0642|consensus	577		99.68
KOG2111|consensus	346		99.67
KOG1272|consensus	545		99.67
KOG4227|consensus	609		99.66
KOG1409|consensus	404		99.65
KOG0644|consensus	1113		99.65
KOG1334|consensus	559		99.64
KOG0771|consensus	398		99.64
KOG2139|consensus	445		99.62
KOG1272|consensus	545		99.62
KOG2321|consensus	703		99.6
PRK03629	429	tolB translocation protein TolB; Provisional	99.6
PRK05137	435	tolB translocation protein TolB; Provisional	99.59
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.59
PRK02889	427	tolB translocation protein TolB; Provisional	99.59
PF08154	65	NLE: NLE (NUC135) domain; InterPro: IPR012972 This	99.58
PRK02889	427	tolB translocation protein TolB; Provisional	99.58
KOG3881|consensus	412		99.58
KOG2321|consensus	703		99.57
KOG2394|consensus	636		99.57
KOG2111|consensus	346		99.57
PRK04922	433	tolB translocation protein TolB; Provisional	99.56
KOG1354|consensus	433		99.55
KOG0974|consensus	967		99.54
PF08662	194	eIF2A: Eukaryotic translation initiation factor eI	99.53
PRK03629	429	tolB translocation protein TolB; Provisional	99.53
KOG1354|consensus	433		99.5
KOG4547|consensus	541		99.5
PRK04922	433	tolB translocation protein TolB; Provisional	99.49
KOG0974|consensus	967		99.49
PRK05137	435	tolB translocation protein TolB; Provisional	99.49
KOG4497|consensus	447		99.49
KOG0280|consensus	339		99.46
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.44
KOG4497|consensus	447		99.43
PRK00178	430	tolB translocation protein TolB; Provisional	99.43
KOG1409|consensus	404		99.41
KOG1064|consensus	2439		99.41
KOG4547|consensus	541		99.38
KOG0309|consensus	1081		99.37
PRK04792	448	tolB translocation protein TolB; Provisional	99.36
KOG0280|consensus	339		99.36
KOG1064|consensus	2439		99.35
PRK01029	428	tolB translocation protein TolB; Provisional	99.34
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.34
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.34
KOG2315|consensus	566		99.3
TIGR02800	417	propeller_TolB tol-pal system beta propeller repea	99.3
PRK01029	428	tolB translocation protein TolB; Provisional	99.29
KOG4190|consensus	1034		99.27
KOG2695|consensus	425		99.25
PRK00178	430	tolB translocation protein TolB; Provisional	99.24
KOG2041|consensus	1189		99.22
PRK04792	448	tolB translocation protein TolB; Provisional	99.22
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.21
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.19
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.16
PF10282	345	Lactonase: Lactonase, 7-bladed beta-propeller; Int	99.15
COG5170	460	CDC55 Serine/threonine protein phosphatase 2A, reg	99.14
PF02239	369	Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO	99.14
KOG3914|consensus	390		99.14
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	99.13
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	99.12
KOG4532|consensus	344		99.08
KOG3914|consensus	390		99.04
COG2706	346	3-carboxymuconate cyclase [Carbohydrate transport	99.03
KOG2114|consensus	933		99.03
KOG2066|consensus	846		99.03
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	99.01
KOG4532|consensus	344		99.01
KOG4714|consensus	319		99.0
PRK04043	419	tolB translocation protein TolB; Provisional	98.97
KOG4714|consensus	319		98.96
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.93
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.93
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.92
KOG0309|consensus	1081		98.92
KOG2695|consensus	425		98.9
COG4946	668	Uncharacterized protein related to the periplasmic	98.9
TIGR03300	377	assembly_YfgL outer membrane assembly lipoprotein	98.89
KOG4190|consensus	1034		98.89
PF15492	282	Nbas_N: Neuroblastoma-amplified sequence, N termin	98.89
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.88
PF00400	39	WD40: WD domain, G-beta repeat; InterPro: IPR01978	98.86
KOG1275|consensus	1118		98.84
KOG2315|consensus	566		98.82
KOG0882|consensus	558		98.81
KOG1275|consensus	1118		98.81
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	98.81
KOG1912|consensus	1062		98.78
KOG1912|consensus	1062		98.78
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.77
TIGR02658	352	TTQ_MADH_Hv methylamine dehydrogenase heavy chain.	98.76
PF04762	928	IKI3: IKI3 family; InterPro: IPR006849 Members of	98.75
KOG1920|consensus	1265		98.73
KOG2041|consensus	1189		98.73
KOG1008|consensus	783		98.7
COG4946	668	Uncharacterized protein related to the periplasmic	98.69
KOG1832|consensus	1516		98.66
KOG1920|consensus	1265		98.61
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.61
KOG1832|consensus	1516		98.58
KOG0882|consensus	558		98.56
KOG2114|consensus	933		98.56
PF11768	545	DUF3312: Protein of unknown function (DUF3312); In	98.54
KOG2314|consensus	698		98.54
PRK04043	419	tolB translocation protein TolB; Provisional	98.52
PF13360	238	PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A	98.45
PF08450	246	SGL: SMP-30/Gluconolaconase/LRE-like region; Inter	98.45
COG5354	561	Uncharacterized protein, contains Trp-Asp (WD) rep	98.44
KOG4649|consensus	354		98.44
KOG2314|consensus	698		98.43
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.42
KOG1008|consensus	783		98.41
KOG3621|consensus	726		98.38
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	98.33
KOG1645|consensus	463		98.33
PRK11138	394	outer membrane biogenesis protein BamB; Provisiona	98.29
KOG3617|consensus	1416		98.29
KOG2066|consensus	846		98.2
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.14
KOG1645|consensus	463		98.13
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	98.1
PF14783	111	BBS2_Mid: Ciliary BBSome complex subunit 2, middle	98.08
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	98.05
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.96
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.96
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.93
PF03178	321	CPSF_A: CPSF A subunit region; InterPro: IPR004871	97.86
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.83
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	97.82
smart00320	40	WD40 WD40 repeats. Note that these repeats are per	97.8
KOG4640|consensus	665		97.62
KOG3621|consensus	726		97.61
PF08553	794	VID27: VID27 cytoplasmic protein; InterPro: IPR013	97.59
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	97.58
PF08596	395	Lgl_C: Lethal giant larvae(Lgl) like, C-terminal;	97.57
PHA02713	557	hypothetical protein; Provisional	97.54
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.53
PRK02888	635	nitrous-oxide reductase; Validated	97.51
PF07433	305	DUF1513: Protein of unknown function (DUF1513); In	97.48
KOG3617|consensus	1416		97.46
KOG4640|consensus	665		97.37
PF04053	443	Coatomer_WDAD: Coatomer WD associated region ; Int	97.36
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	97.31
PRK02888	635	nitrous-oxide reductase; Validated	97.26
KOG4441|consensus	571		97.22
KOG2079|consensus	1206		97.19
PF04841	410	Vps16_N: Vps16, N-terminal region; InterPro: IPR00	97.19
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	97.16
PHA02713	557	hypothetical protein; Provisional	97.13
KOG2079|consensus	1206		97.13
KOG4649|consensus	354		97.12
cd00216	488	PQQ_DH Dehydrogenases with pyrrolo-quinoline quino	97.1
KOG2395|consensus	644		97.05
KOG2395|consensus	644		97.04
KOG2444|consensus	238		97.02
KOG2444|consensus	238		96.93
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	96.93
PF06977	248	SdiA-regulated: SdiA-regulated; InterPro: IPR00972	96.88
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	96.85
KOG4441|consensus	571		96.83
COG0823	425	TolB Periplasmic component of the Tol biopolymer t	96.83
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.74
PF00780	275	CNH: CNH domain; InterPro: IPR001180 Based on sequ	96.74
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	96.71
PF12894	47	Apc4_WD40: Anaphase-promoting complex subunit 4 WD	96.61
COG3391	381	Uncharacterized conserved protein [Function unknow	96.54
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	96.48
PRK13616	591	lipoprotein LpqB; Provisional	96.44
PHA03098	534	kelch-like protein; Provisional	96.43
PRK13616	591	lipoprotein LpqB; Provisional	96.41
PF14761	215	HPS3_N: Hermansky-Pudlak syndrome 3	96.4
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	96.39
COG3391	381	Uncharacterized conserved protein [Function unknow	96.28
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	96.07
KOG1916|consensus	1283		96.06
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	96.04
PF14727	418	PHTB1_N: PTHB1 N-terminus	95.98
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	95.98
KOG2280|consensus	829		95.94
PF12234	631	Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0	95.92
PF15390	671	DUF4613: Domain of unknown function (DUF4613)	95.87
PF08728	717	CRT10: CRT10; InterPro: IPR014839 CRT10 is a trans	95.86
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.82
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	95.67
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	95.66
PF06433	342	Me-amine-dh_H: Methylamine dehydrogenase heavy cha	95.64
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.64
KOG3630|consensus	1405		95.61
PHA03098	534	kelch-like protein; Provisional	95.55
PF00930	353	DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-termin	95.54
TIGR02604	367	Piru_Ver_Nterm putative membrane-bound dehydrogena	95.49
KOG1916|consensus	1283		95.48
PF14870	302	PSII_BNR: Photosynthesis system II assembly factor	95.33
PRK13684	334	Ycf48-like protein; Provisional	95.3
KOG1897|consensus	1096		95.17
PHA02790	480	Kelch-like protein; Provisional	95.07
KOG4499|consensus	310		95.03
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	94.92
KOG1897|consensus	1096		94.86
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	94.74
PHA02790	480	Kelch-like protein; Provisional	94.58
KOG1900|consensus	1311		94.46
COG3204	316	Uncharacterized protein conserved in bacteria [Fun	94.31
COG3386	307	Gluconolactonase [Carbohydrate transport and metab	94.3
PF10313	43	DUF2415: Uncharacterised protein domain (DUF2415);	94.26
TIGR03075	527	PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan	94.04
COG5276	370	Uncharacterized conserved protein [Function unknow	93.99
KOG4499|consensus	310		93.62
PF10647	253	Gmad1: Lipoprotein LpqB beta-propeller domain; Int	93.26
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	93.22
PF07569	219	Hira: TUP1-like enhancer of split; InterPro: IPR01	92.88
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	92.63
COG5276	370	Uncharacterized conserved protein [Function unknow	92.59
KOG3630|consensus	1405		92.31
KOG1983|consensus	993		92.14
KOG4460|consensus	741		92.13
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	92.12
COG5167	776	VID27 Protein involved in vacuole import and degra	92.07
KOG2377|consensus	657		92.04
PLN02153	341	epithiospecifier protein	91.85
PF07995	331	GSDH: Glucose / Sorbosone dehydrogenase; InterPro:	91.71
PF05694	461	SBP56: 56kDa selenium binding protein (SBP56); Int	91.61
KOG4460|consensus	741		91.09
KOG2377|consensus	657		91.08
PF02897	414	Peptidase_S9_N: Prolyl oligopeptidase, N-terminal	90.97
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	90.94
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	90.9
PF14655	415	RAB3GAP2_N: Rab3 GTPase-activating protein regulat	90.61
PF12341	27	DUF3639: Protein of unknown function (DUF3639) ; I	90.6
COG5167	776	VID27 Protein involved in vacuole import and degra	90.55
KOG2247|consensus	615		90.44
PRK14131	376	N-acetylneuraminic acid mutarotase; Provisional	88.93
KOG2247|consensus	615		88.77
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	88.66
PF10168	717	Nup88: Nuclear pore component; InterPro: IPR019321	88.55
KOG1900|consensus	1311		88.24
COG4590	733	ABC-type uncharacterized transport system, permeas	87.84
KOG3616|consensus	1636		87.83
KOG3522|consensus	925		87.65
PF07676	39	PD40: WD40-like Beta Propeller Repeat; InterPro: I	87.47
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	87.23
PF12657	173	TFIIIC_delta: Transcription factor IIIC subunit de	86.57
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	86.33
PF08801	422	Nucleoporin_N: Nup133 N terminal like; InterPro: I	85.3
COG3490	366	Uncharacterized protein conserved in bacteria [Fun	85.05
PF14583	386	Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C	85.05
smart00564	33	PQQ beta-propeller repeat. Beta-propeller repeat o	85.0
PF11635	753	Med16: Mediator complex subunit 16; InterPro: IPR0	84.89
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.57
TIGR03074	764	PQQ_membr_DH membrane-bound PQQ-dependent dehydrog	84.55
PF11715	547	Nup160: Nucleoporin Nup120/160; InterPro: IPR02171	84.51
PF05096	264	Glu_cyclase_2: Glutamine cyclotransferase; InterPr	84.42
TIGR03547	346	muta_rot_YjhT mutatrotase, YjhT family. Members of	84.33
PF13449	326	Phytase-like: Esterase-like activity of phytase	84.04
TIGR03548	323	mutarot_permut cyclically-permuted mutatrotase fam	83.6
PF01011	38	PQQ: PQQ enzyme repeat family.; InterPro: IPR00237	82.95
PLN02153	341	epithiospecifier protein	82.69
PLN00033	398	photosystem II stability/assembly factor; Provisio	82.66
COG5308	1263	NUP170 Nuclear pore complex subunit [Intracellular	82.57
TIGR02276	42	beta_rpt_yvtn 40-residue YVTN family beta-propelle	82.31
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	81.05
PRK13684	334	Ycf48-like protein; Provisional	81.05
PF02333	381	Phytase: Phytase; InterPro: IPR003431 Phytase (3.1	80.91
PF14781	136	BBS2_N: Ciliary BBSome complex subunit 2, N-termin	80.45

>KOG0313|consensus

Probab=100.00  E-value=2e-69  Score=433.42  Aligned_cols=373  Identities=45%  Similarity=0.890  Sum_probs=337.1

Q ss_pred             CCceEEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCc
Q psy2107          13 VPSEVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISS   92 (391)
Q Consensus        13 ~~~~v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~   92 (391)
                      ..++||++|+|+++.|++|+.||.||++.++++|+.++|+||+.++..-++  .||+|++.|++|++++.+||...++++
T Consensus         4 ~~~qvqvrF~Tk~e~~aVpD~p~~iP~~~~r~gLs~ivN~ll~se~~~~K~--~pFDFLi~gelLRtsL~e~l~~kgiSs   81 (423)
T KOG0313|consen    4 NSGQVQVRFFTKNEDYAVPDVPFAIPTSVERYGLSNIVNKLLKSENGFWKP--VPFDFLIKGELLRTSLDEHLEEKGISS   81 (423)
T ss_pred             CcceEEEEEEecccccCCCCcceeccCcceEccHHHHHHHHHhccCCcCCC--CcceEEEcceeeeccHHHHHHHcCcCh
Confidence            468999999999889999999999999999999999999999998877777  999999999999999999999999999


Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeE
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA  172 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~  172 (391)
                      |..++++|.+...+|.++.++.|.++|.++...++.+++|++||.+++||..|+....+.+|.++|.+++|.-.++....
T Consensus        82 E~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~  161 (423)
T KOG0313|consen   82 EEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCL  161 (423)
T ss_pred             hheeEEEEEEecCCCCccccccchhhhhhhcccCceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999766566668


Q ss_pred             EEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       173 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      |++++.|.++++|.++........+....||...|.+++..+++..+++|+.|..|++|+..+.........    ....
T Consensus       162 fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~----s~~r  237 (423)
T KOG0313|consen  162 FVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESS----SNRR  237 (423)
T ss_pred             EEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCcccccccc----chhh
Confidence            999999999999999877776777777779999999999999999999999999999999433221100000    0011


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~  332 (391)
                      .+..........+.|+..+.+|..+|.++.|++...+++++.|.+|+.||+.++....++.+...+.++.++|..++|++
T Consensus       238 rk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~  317 (423)
T KOG0313|consen  238 RKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLAS  317 (423)
T ss_pred             hhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeee
Confidence            11112233456688999999999999999999989999999999999999999999999999999999999999999999


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+.|..|++||++++.+..+...+.+|.+.|.++.|+|.+.++|++++.|+++++||+|
T Consensus       318 gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvR  376 (423)
T KOG0313|consen  318 GSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVR  376 (423)
T ss_pred             cCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEec
Confidence            99999999999999998889999999999999999999999999999999999999997

>KOG0271|consensus

Probab=100.00  E-value=1.1e-56  Score=360.75  Aligned_cols=334  Identities=25%  Similarity=0.429  Sum_probs=288.3

Q ss_pred             CceEEEEEEeC-CCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCc
Q psy2107          14 PSEVQLKFFTK-QEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISS   92 (391)
Q Consensus        14 ~~~v~~~~~~~-~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~   92 (391)
                      ..+|+..|+.- ........+++.+|..+++.||..++|+|+.+.++   +  +||.|+.++..+..++++.|....+++
T Consensus        11 ~~~i~~~l~~~~~d~g~~~g~~~~vp~~is~~qL~~l~n~ll~~s~d---p--~pysf~v~~~ei~~~l~~tL~~~~v~t   85 (480)
T KOG0271|consen   11 LVTIPLLLVSVATDTGENEGSALLVPGDISTLQLELLCNQLLGNSDD---P--VPYSFFVTEIEILDSLETTLEKQNVST   85 (480)
T ss_pred             cccchhhcccccCCcccccCCceeccccCCHHHHHHHHHHHhhcccC---C--cceEEEecchHHHHHHHHHHhhcccch
Confidence            34678888772 22333556789999999999999999999998532   3  889999999999999999999999999


Q ss_pred             cceEEEEEEeccCC------CCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEE
Q psy2107          93 ENVIDVEYLESTPT------PSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAW  163 (391)
Q Consensus        93 ~~~~~~~~~~~~~~------~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~  163 (391)
                      |..+.+-|.+....      +....+.||.++|.|++|+  +..|++|+.|.++|+||+ +.....+.++|...|.|++|
T Consensus        86 e~~l~lvyqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvaw  165 (480)
T KOG0271|consen   86 EDVLTLVYQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAW  165 (480)
T ss_pred             hheeeEEeccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEE
Confidence            99999999874332      2334567899999999999  569999999999999999 45567789999999999999


Q ss_pred             EecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         164 LYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-----SRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       164 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-----~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                         +||+..||+|+.||+|++||....   ......+.+|...|++++|.|     ..++|++++.||.++|||+..   
T Consensus       166 ---sPDgk~iASG~~dg~I~lwdpktg---~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~---  236 (480)
T KOG0271|consen  166 ---SPDGKKIASGSKDGSIRLWDPKTG---QQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL---  236 (480)
T ss_pred             ---CCCcchhhccccCCeEEEecCCCC---CcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccC---
Confidence               889999999999999999995422   244567899999999999976     567999999999999999965   


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC---
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN---  315 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---  315 (391)
                                                +.++..+.+|+.+|+|+.|-..+.+++|+.|++|++|+...|.+...+++|   
T Consensus       237 --------------------------~~~~~~lsgHT~~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahw  290 (480)
T KOG0271|consen  237 --------------------------GTCVRTLSGHTASVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHW  290 (480)
T ss_pred             --------------------------ceEEEEeccCccceEEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchh
Confidence                                      557889999999999999999999999999999999998766554444332   


Q ss_pred             -----------------------------------------------------------------------------eee
Q psy2107         316 -----------------------------------------------------------------------------KSF  318 (391)
Q Consensus       316 -----------------------------------------------------------------------------~~i  318 (391)
                                                                                                   .-|
T Consensus       291 vN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lV  370 (480)
T KOG0271|consen  291 VNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALV  370 (480)
T ss_pred             eeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhe
Confidence                                                                                         136


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         319 FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+.||||++++|+++.|.+|++||-++++   .+..+++|-..|..++|+. +.++|+||+.|.++++||+|
T Consensus       371 n~V~fSPd~r~IASaSFDkSVkLW~g~tGk---~lasfRGHv~~VYqvawsa-DsRLlVS~SkDsTLKvw~V~  439 (480)
T KOG0271|consen  371 NHVSFSPDGRYIASASFDKSVKLWDGRTGK---FLASFRGHVAAVYQVAWSA-DSRLLVSGSKDSTLKVWDVR  439 (480)
T ss_pred             eeEEECCCccEEEEeecccceeeeeCCCcc---hhhhhhhccceeEEEEecc-CccEEEEcCCCceEEEEEee
Confidence            889999999999999999999999999888   8889999999999999999 77899999999999999986

>KOG0271|consensus

Probab=100.00  E-value=5.6e-48  Score=310.60  Aligned_cols=303  Identities=23%  Similarity=0.429  Sum_probs=251.5

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      +...|.++|..|++          .+-+.++++|+.....+  ..++.+|..+|.|++|+  |+.||+|+.||+|++||.
T Consensus       119 l~~~fsp~g~~l~t----------GsGD~TvR~WD~~TeTp--~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdp  186 (480)
T KOG0271|consen  119 LSVQFSPTGSRLVT----------GSGDTTVRLWDLDTETP--LFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDP  186 (480)
T ss_pred             EEEEecCCCceEEe----------cCCCceEEeeccCCCCc--ceeecCCccEEEEEEECCCcchhhccccCCeEEEecC
Confidence            56688888877765          45688999998865554  57889999999999998  669999999999999998


Q ss_pred             -CCce-EEeccCCCCCeeEEEEEecC--CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107         144 -RGEH-KLNIPGHGGPVKGVAWLYND--GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF  219 (391)
Q Consensus       144 -~~~~-~~~~~~~~~~v~~l~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l  219 (391)
                       ++++ ...+.+|...|++++|.|.+  +...+||+++.||.|+|||+.    ...++..+.+|+.+|+|+.|-.+| +|
T Consensus       187 ktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~----~~~~~~~lsgHT~~VTCvrwGG~g-li  261 (480)
T KOG0271|consen  187 KTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTK----LGTCVRTLSGHTASVTCVRWGGEG-LI  261 (480)
T ss_pred             CCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEcc----CceEEEEeccCccceEEEEEcCCc-eE
Confidence             4444 44789999999999998753  456799999999999999954    557889999999999999998766 79


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCC------------------------CCC-------------------------CCc
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSE------------------------NGD-------------------------EGT  250 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~------------------------~~~-------------------------~~~  250 (391)
                      ++|+.|++|++|+...+........                        ...                         ...
T Consensus       262 ySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVS  341 (480)
T KOG0271|consen  262 YSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVS  341 (480)
T ss_pred             EecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEE
Confidence            9999999999999887664332200                        000                         000


Q ss_pred             c-ccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC
Q psy2107         251 T-SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS  327 (391)
Q Consensus       251 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~  327 (391)
                      . .+.....+......+++..+.+|+.-|..+.|+|+++ +++++.|..|++||.++|+.+.++++|- .|+.++|+.|.
T Consensus       342 gsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDs  421 (480)
T KOG0271|consen  342 GSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADS  421 (480)
T ss_pred             ecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCc
Confidence            0 0111112234456678888999999999999998776 8899999999999999999999999775 89999999999


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++|++|+.|.++++|++++.+   +...+.+|...|.++.|+| ++..+++|+.|..+++|.
T Consensus       422 RLlVS~SkDsTLKvw~V~tkK---l~~DLpGh~DEVf~vDwsp-DG~rV~sggkdkv~~lw~  479 (480)
T KOG0271|consen  422 RLLVSGSKDSTLKVWDVRTKK---LKQDLPGHADEVFAVDWSP-DGQRVASGGKDKVLRLWR  479 (480)
T ss_pred             cEEEEcCCCceEEEEEeeeee---ecccCCCCCceEEEEEecC-CCceeecCCCceEEEeec
Confidence            999999999999999999877   8889999999999999999 556799999999999995

>KOG0272|consensus

Probab=100.00  E-value=1.7e-45  Score=299.84  Aligned_cols=272  Identities=25%  Similarity=0.356  Sum_probs=242.0

Q ss_pred             cee-eEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC----CEEEEEECCCeEEE
Q psy2107          66 IQF-DFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN----DWILTGCYDHSVHI  140 (391)
Q Consensus        66 ~~~-~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~----~~l~t~~~dg~i~i  140 (391)
                      +.+ .|+.|++.+++          .+-.+..++|..+..  +....+.+|.+.|.++.|++    ..+|||+.||++++
T Consensus       178 is~~~fS~ds~~laT----------~swsG~~kvW~~~~~--~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl  245 (459)
T KOG0272|consen  178 ISGCSFSRDSKHLAT----------GSWSGLVKVWSVPQC--NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL  245 (459)
T ss_pred             ceeeEeecCCCeEEE----------eecCCceeEeecCCc--ceeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence            555 67788877765          345678888887766  44677889999999999983    28999999999999


Q ss_pred             EcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107         141 WTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF  219 (391)
Q Consensus       141 wd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l  219 (391)
                      |++++ ..+..+.+|...|..++|   +|+|++|++++.|.+-++||++    +...+....||..+|.+++|+|+|.++
T Consensus       246 w~~~~e~~l~~l~gH~~RVs~Vaf---HPsG~~L~TasfD~tWRlWD~~----tk~ElL~QEGHs~~v~~iaf~~DGSL~  318 (459)
T KOG0272|consen  246 WKLSQETPLQDLEGHLARVSRVAF---HPSGKFLGTASFDSTWRLWDLE----TKSELLLQEGHSKGVFSIAFQPDGSLA  318 (459)
T ss_pred             eccCCCcchhhhhcchhhheeeee---cCCCceeeecccccchhhcccc----cchhhHhhcccccccceeEecCCCcee
Confidence            99965 777899999999999999   7789999999999999999976    334456668999999999999999999


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeE
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTL  298 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i  298 (391)
                      ++||.|..-+|||+++                             ..++..+.+|..+|..+.|+|+|+ +++|+.|+++
T Consensus       319 ~tGGlD~~~RvWDlRt-----------------------------gr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~  369 (459)
T KOG0272|consen  319 ATGGLDSLGRVWDLRT-----------------------------GRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTC  369 (459)
T ss_pred             eccCccchhheeeccc-----------------------------CcEEEEecccccceeeEeECCCceEEeecCCCCcE
Confidence            9999999999999988                             457889999999999999999888 9999999999


Q ss_pred             EEEecccCceeEEEECCe-eeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         299 KIWDAELGGMKSEIVGNK-SFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~-~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      +|||++....+.++..|. -|..+.|+| .|.+|++++.|++++||..++..   ++..+.||.+.|.+++.++ ++.++
T Consensus       370 kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~---~~ksLaGHe~kV~s~Dis~-d~~~i  445 (459)
T KOG0272|consen  370 KVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWS---PLKSLAGHEGKVISLDISP-DSQAI  445 (459)
T ss_pred             EEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcc---cchhhcCCccceEEEEecc-CCceE
Confidence            999999999999999887 678899999 68899999999999999987766   8889999999999999999 77789


Q ss_pred             EEeeCCCcEEEEe
Q psy2107         377 VSASFDNSVKLWD  389 (391)
Q Consensus       377 ~s~~~dg~v~iwd  389 (391)
                      +|++.|.++++|.
T Consensus       446 ~t~s~DRT~KLW~  458 (459)
T KOG0272|consen  446 ATSSFDRTIKLWR  458 (459)
T ss_pred             EEeccCceeeecc
Confidence            9999999999995

>KOG0272|consensus

Probab=100.00  E-value=9.5e-44  Score=289.65  Aligned_cols=240  Identities=22%  Similarity=0.413  Sum_probs=217.7

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      +-+.+|..+.|+  ++.|+|||.+|.+++|+. +...+.++.+|...|.++.|+|.. ++..+|+|+.||++++|+++  
T Consensus       173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~-~~~~lat~s~Dgtvklw~~~--  249 (459)
T KOG0272|consen  173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVD-SDLNLATASADGTVKLWKLS--  249 (459)
T ss_pred             cCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCC-CccceeeeccCCceeeeccC--
Confidence            467789999998  779999999999999998 667888999999999999998753 36689999999999999965  


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                        .-.++..+.+|...|..++|+|+|++|++++.|.+-++||++++.                             .+..
T Consensus       250 --~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~-----------------------------ElL~  298 (459)
T KOG0272|consen  250 --QETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKS-----------------------------ELLL  298 (459)
T ss_pred             --CCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccch-----------------------------hhHh
Confidence              226788899999999999999999999999999999999998844                             4556


Q ss_pred             ecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         271 LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      ..+|...|.+++|.++|. +++|+.|..-+|||+++|.++..+.+|. +|.+++|+|+|-.||+|+.|++++|||++...
T Consensus       299 QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~  378 (459)
T KOG0272|consen  299 QEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRS  378 (459)
T ss_pred             hcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccc
Confidence            779999999999996655 7788999999999999999999999886 99999999999999999999999999999776


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                         .+..+.+|.+-|+.+.|+|..+++|+|+|.|++++||.-
T Consensus       379 ---~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~  417 (459)
T KOG0272|consen  379 ---ELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWST  417 (459)
T ss_pred             ---cceecccccchhhheEecccCCeEEEEcccCcceeeecC
Confidence               688999999999999999988999999999999999964

>KOG0286|consensus

Probab=100.00  E-value=2.1e-39  Score=252.45  Aligned_cols=272  Identities=16%  Similarity=0.237  Sum_probs=235.9

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|.++.|+  .+++++++.||.+.|||. ++.+...++-....|..++|   +|.++++|+|+-|+...||+
T Consensus        49 r~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~---sPSg~~VAcGGLdN~Csiy~  125 (343)
T KOG0286|consen   49 RTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAY---SPSGNFVACGGLDNKCSIYP  125 (343)
T ss_pred             EEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEE---CCCCCeEEecCcCceeEEEe
Confidence            5677999999999998  569999999999999998 78888888888899999999   77899999999999999999


Q ss_pred             ecCC--CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC--------------CCCCCCc
Q psy2107         187 WKVE--SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS--------------ENGDEGT  250 (391)
Q Consensus       187 ~~~~--~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~--------------~~~~~~~  250 (391)
                      +...  .......+.+.+|.+.+.|+.|-+++ .|++++.|.++.+||+++++....+.              ..+....
T Consensus       126 ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvS  204 (343)
T KOG0286|consen  126 LSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVS  204 (343)
T ss_pred             cccccccccceeeeeecCccceeEEEEEcCCC-ceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEe
Confidence            8755  44456677899999999999999854 69999999999999999988765431              1112223


Q ss_pred             cccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCC
Q psy2107         251 TSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPL  326 (391)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~  326 (391)
                      .........|+.+.....+++.+|...|.+++|.|++. |++|+.|++.|+||++..+.+..+.+..   +|++++||..
T Consensus       205 g~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~S  284 (343)
T KOG0286|consen  205 GGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKS  284 (343)
T ss_pred             cccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEccc
Confidence            33444556778888899999999999999999998877 9999999999999999999999888664   8999999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      |++|++|..|..+.+||.-..+   ....+.+|.+.|+++..+| ++..++|||.|.+++||.
T Consensus       285 GRlLfagy~d~~c~vWDtlk~e---~vg~L~GHeNRvScl~~s~-DG~av~TgSWDs~lriW~  343 (343)
T KOG0286|consen  285 GRLLFAGYDDFTCNVWDTLKGE---RVGVLAGHENRVSCLGVSP-DGMAVATGSWDSTLRIWA  343 (343)
T ss_pred             ccEEEeeecCCceeEeeccccc---eEEEeeccCCeeEEEEECC-CCcEEEecchhHheeecC
Confidence            9999999999999999976655   6778899999999999999 777899999999999994

>KOG0263|consensus

Probab=100.00  E-value=6.9e-40  Score=287.07  Aligned_cols=237  Identities=25%  Similarity=0.485  Sum_probs=213.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc--------------------------------eEEeccCCCCCeeE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE--------------------------------HKLNIPGHGGPVKG  160 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~--------------------------------~~~~~~~~~~~v~~  160 (391)
                      -...++|..|+  +..+|.|..|..|++|.++..                                ....+.+|.++|..
T Consensus       377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg  456 (707)
T KOG0263|consen  377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG  456 (707)
T ss_pred             cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence            34478999998  559999999999999987531                                12235689999999


Q ss_pred             EEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCC
Q psy2107         161 VAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERG  240 (391)
Q Consensus       161 l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~  240 (391)
                      +.|   +|+.++|++++.|+++|+|.+.    ++.++..+.+|..+|..+.|+|.|-+||+||.|++-++|..+.     
T Consensus       457 ~sF---sPd~rfLlScSED~svRLWsl~----t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~-----  524 (707)
T KOG0263|consen  457 CSF---SPDRRFLLSCSEDSSVRLWSLD----TWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDH-----  524 (707)
T ss_pred             eee---cccccceeeccCCcceeeeecc----cceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeeccc-----
Confidence            999   7788999999999999999976    5678888899999999999999999999999999999999876     


Q ss_pred             CCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe-ee
Q psy2107         241 DPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SF  318 (391)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i  318 (391)
                                              ..+++.+.+|-+.|.|+.|+|+ .++++||.|.+||+||+.+|..++.|.+|. +|
T Consensus       525 ------------------------~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V  580 (707)
T KOG0263|consen  525 ------------------------NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPV  580 (707)
T ss_pred             ------------------------CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCce
Confidence                                    5578889999999999999965 569999999999999999999999999887 99


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         319 FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+++|||+|++|++|+.||.|.+||+..+.   ++..+.+|.+.|.++.|+. ++.+||+||.|++|++||+.
T Consensus       581 ~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~---~v~~l~~Ht~ti~SlsFS~-dg~vLasgg~DnsV~lWD~~  649 (707)
T KOG0263|consen  581 TALAFSPCGRYLASGDEDGLIKIWDLANGS---LVKQLKGHTGTIYSLSFSR-DGNVLASGGADNSVRLWDLT  649 (707)
T ss_pred             EEEEEcCCCceEeecccCCcEEEEEcCCCc---chhhhhcccCceeEEEEec-CCCEEEecCCCCeEEEEEch
Confidence            999999999999999999999999998877   7888999999999999999 66799999999999999974

>KOG0279|consensus

Probab=100.00  E-value=1.3e-38  Score=246.60  Aligned_cols=238  Identities=24%  Similarity=0.433  Sum_probs=205.3

Q ss_pred             CcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCC------CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC
Q psy2107         110 LDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRR------GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ  180 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~------~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg  180 (391)
                      .++.+|+++|+.++..   .+.+++++.|.++.+|+++      +.....+.+|...|..+..   ++++++.++++.|+
T Consensus         9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~---s~dg~~alS~swD~   85 (315)
T KOG0279|consen    9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVL---SSDGNFALSASWDG   85 (315)
T ss_pred             eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEE---ccCCceEEeccccc
Confidence            3456899999999986   6799999999999999983      3457788999999999999   77999999999999


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      ++++||+.    ..+..+.|.+|...|.+++|+++.+.+++|+.|++|++|++..                         
T Consensus        86 ~lrlWDl~----~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g-------------------------  136 (315)
T KOG0279|consen   86 TLRLWDLA----TGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLG-------------------------  136 (315)
T ss_pred             eEEEEEec----CCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecc-------------------------
Confidence            99999965    3367788999999999999999999999999999999999864                         


Q ss_pred             cCCCCCceeeecC--ccCcccEEEeccCC---eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEee
Q psy2107         261 SASSRTPLITLKG--HKEAISAVQWTAVD---EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       261 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~  334 (391)
                           .+..++..  +...|.|+.|+|..   .|++++.|++|++||+++.+....+.+|. .++.+++||||...++|+
T Consensus       137 -----~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGg  211 (315)
T KOG0279|consen  137 -----VCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGG  211 (315)
T ss_pred             -----cEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCC
Confidence                 23334433  37899999999763   49999999999999999999999998876 788999999999999999


Q ss_pred             CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         335 ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .||.+.+||++.++   .+..+ +|...|.+++|+| +...|+.+. +..|+|||+
T Consensus       212 kdg~~~LwdL~~~k---~lysl-~a~~~v~sl~fsp-nrywL~~at-~~sIkIwdl  261 (315)
T KOG0279|consen  212 KDGEAMLWDLNEGK---NLYSL-EAFDIVNSLCFSP-NRYWLCAAT-ATSIKIWDL  261 (315)
T ss_pred             CCceEEEEEccCCc---eeEec-cCCCeEeeEEecC-CceeEeecc-CCceEEEec
Confidence            99999999998876   44444 5889999999999 766665554 557999997

>KOG0279|consensus

Probab=100.00  E-value=9.4e-38  Score=241.78  Aligned_cols=259  Identities=21%  Similarity=0.332  Sum_probs=213.1

Q ss_pred             CccceEEEEEEeccCCCC---CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEE
Q psy2107          91 SSENVIDVEYLESTPTPS---PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWL  164 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~  164 (391)
                      +.++++-+|...+.....   ...+.||...|..+..+  +++.++++.|+++++||+ .++....+.+|...|.+++| 
T Consensus        35 srDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~-  113 (315)
T KOG0279|consen   35 SRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAF-  113 (315)
T ss_pred             ccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEe-
Confidence            456677777665443322   35667899999999987  779999999999999999 56888899999999999999 


Q ss_pred             ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec--CCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCC
Q psy2107         165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG--HERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERG  240 (391)
Q Consensus       165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~  240 (391)
                        +++...+++|+.|.+|++|+.-     ..+..+...  +++.|.|+.|+|+  ..+|++++.|+++++||+++     
T Consensus       114 --s~dn~qivSGSrDkTiklwnt~-----g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~-----  181 (315)
T KOG0279|consen  114 --STDNRQIVSGSRDKTIKLWNTL-----GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRN-----  181 (315)
T ss_pred             --cCCCceeecCCCcceeeeeeec-----ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCC-----
Confidence              7788899999999999999942     234444443  3789999999998  68999999999999999987     


Q ss_pred             CCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCeeeE
Q psy2107         241 DPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFF  319 (391)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~  319 (391)
                                              .+....+.+|++.++.++++|+|. +++|+.||.+.+||++.++.+..+.+...|.
T Consensus       182 ------------------------~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~v~  237 (315)
T KOG0279|consen  182 ------------------------CQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDIVN  237 (315)
T ss_pred             ------------------------cchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCeEe
Confidence                                    446677889999999999997766 7788999999999999999999999999999


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec---------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS---------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++|+|+.-.|+.+. +..|+|||+.+..   ++..+.         ...-...+++|++ ++..|.+|-.|+.|++|.+
T Consensus       238 sl~fspnrywL~~at-~~sIkIwdl~~~~---~v~~l~~d~~g~s~~~~~~~clslaws~-dG~tLf~g~td~~irv~qv  312 (315)
T KOG0279|consen  238 SLCFSPNRYWLCAAT-ATSIKIWDLESKA---VVEELKLDGIGPSSKAGDPICLSLAWSA-DGQTLFAGYTDNVIRVWQV  312 (315)
T ss_pred             eEEecCCceeEeecc-CCceEEEeccchh---hhhhccccccccccccCCcEEEEEEEcC-CCcEEEeeecCCcEEEEEe
Confidence            999999877777665 5669999998754   322221         1233467889999 6678999999999999987


Q ss_pred             C
Q psy2107         391 R  391 (391)
Q Consensus       391 r  391 (391)
                      +
T Consensus       313 ~  313 (315)
T KOG0279|consen  313 A  313 (315)
T ss_pred             e
Confidence            4

>KOG0273|consensus

Probab=100.00  E-value=1.5e-37  Score=256.89  Aligned_cols=240  Identities=21%  Similarity=0.440  Sum_probs=209.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-  191 (391)
                      -...|++++|+  |.+||+|+.||.++||+..+..+.++..|+++|.++.|   +..|.+|++++.||++.+||..... 
T Consensus       234 ~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKW---nk~G~yilS~~vD~ttilwd~~~g~~  310 (524)
T KOG0273|consen  234 SNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKW---NKKGTYILSGGVDGTTILWDAHTGTV  310 (524)
T ss_pred             ccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEE---cCCCCEEEeccCCccEEEEeccCceE
Confidence            34679999998  88999999999999999999999999999999999999   8899999999999999999942110 


Q ss_pred             ------------------------------------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         192 ------------------------------------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       192 ------------------------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                                                          ....++.++.+|.++|.+|.|+|.+.+|++++.|++++||....
T Consensus       311 ~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~  390 (524)
T KOG0273|consen  311 KQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQ  390 (524)
T ss_pred             EEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCC
Confidence                                                11234566778999999999999999999999999999999865


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC----------eEEEEECCCeEEEEeccc
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD----------EIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----------~l~s~~~dg~i~iwd~~~  305 (391)
                                                   ......+.+|...|..+.|+|.+          .+++++.|++|++||+..
T Consensus       391 -----------------------------~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~  441 (524)
T KOG0273|consen  391 -----------------------------SNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVES  441 (524)
T ss_pred             -----------------------------CcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccC
Confidence                                         34667788999999999998642          489999999999999999


Q ss_pred             CceeEEEEC-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         306 GGMKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       306 ~~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      +.++.++.. ..+|.+++|+|+|+++|+|+.||.|++|++++++   +.+.+.+ .+.|..++|+. .+..|..+-.||.
T Consensus       442 gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~---l~~s~~~-~~~Ifel~Wn~-~G~kl~~~~sd~~  516 (524)
T KOG0273|consen  442 GVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGK---LVKSYQG-TGGIFELCWNA-AGDKLGACASDGS  516 (524)
T ss_pred             CceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchh---eeEeecC-CCeEEEEEEcC-CCCEEEEEecCCC
Confidence            999999954 4599999999999999999999999999998877   6666654 45699999999 4467888888999


Q ss_pred             EEEEecC
Q psy2107         385 VKLWDLR  391 (391)
Q Consensus       385 v~iwdlr  391 (391)
                      +++-|+|
T Consensus       517 vcvldlr  523 (524)
T KOG0273|consen  517 VCVLDLR  523 (524)
T ss_pred             ceEEEec
Confidence            9999987

>KOG0285|consensus

Probab=100.00  E-value=3e-38  Score=252.57  Aligned_cols=241  Identities=25%  Similarity=0.479  Sum_probs=215.5

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+.+|.+||.|+++.  +.++++|+.|++|+|||+ ++....++.+|-..|..+++   ++...|+++++.|+.|+.|
T Consensus       144 ~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vav---S~rHpYlFs~gedk~VKCw  220 (460)
T KOG0285|consen  144 YRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAV---SKRHPYLFSAGEDKQVKCW  220 (460)
T ss_pred             hhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeee---cccCceEEEecCCCeeEEE
Confidence            34456899999999998  559999999999999999 67777799999999999999   4456689999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      |++    ..+.++.+.+|-+.|.|++.+|.-..|++|+.|..+++||+++                             +
T Consensus       221 DLe----~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt-----------------------------r  267 (460)
T KOG0285|consen  221 DLE----YNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT-----------------------------R  267 (460)
T ss_pred             ech----hhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecc-----------------------------c
Confidence            976    3366788899999999999999999999999999999999987                             6


Q ss_pred             CceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         266 TPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      ..+..+.+|..+|..+.+.+ +..+++|+.|++|++||++.|+...++.+|. .+.+++.+|....+|+++.|. |+-|+
T Consensus       268 ~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~  346 (460)
T KOG0285|consen  268 ASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWK  346 (460)
T ss_pred             ceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceecc
Confidence            68899999999999999984 6789999999999999999999999888776 899999999999999998775 89999


Q ss_pred             CCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..+.   .+..+.+|...|++++.+. ++ ++++|++.|.+.+||-|
T Consensus       347 ~p~g~---f~~nlsgh~~iintl~~ns-D~-v~~~G~dng~~~fwdwk  389 (460)
T KOG0285|consen  347 LPEGE---FLQNLSGHNAIINTLSVNS-DG-VLVSGGDNGSIMFWDWK  389 (460)
T ss_pred             CCccc---hhhccccccceeeeeeecc-Cc-eEEEcCCceEEEEEecC
Confidence            87765   5666899999999999987 44 69999999999999964

>KOG0295|consensus

Probab=100.00  E-value=3.9e-38  Score=252.34  Aligned_cols=248  Identities=23%  Similarity=0.429  Sum_probs=221.7

Q ss_pred             CCCCCCcccCCCCcEEEEEecCC--EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         105 PTPSPLDCILHDDWVSAIDFHND--WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       105 ~~~~~~~~~~h~~~V~~~~~~~~--~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      +++....+.+|..+|+.+-|++.  .+++++.|++|++||. +++....+++|...+..++|   +..|.++++++.|-.
T Consensus        97 Rp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~---~a~Gk~l~tcSsDl~  173 (406)
T KOG0295|consen   97 RPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISF---DASGKYLATCSSDLS  173 (406)
T ss_pred             CCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEE---ecCccEEEecCCccc
Confidence            33456677789999999999976  6777788999999999 77777889999999999999   778999999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      +.+||..   ...+++..+.+|...|.+++|-|.|.++++++.|.+|+.|++.+                          
T Consensus       174 ~~LWd~~---~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~t--------------------------  224 (406)
T KOG0295|consen  174 AKLWDFD---TFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDT--------------------------  224 (406)
T ss_pred             hhheeHH---HHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEeccc--------------------------
Confidence            9999965   23677788889999999999999999999999999999999987                          


Q ss_pred             CCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-------------
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL-------------  326 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~-------------  326 (391)
                         ..++.++.+|...|..+..+.++. +++++.|.++++|-+.++++...+..|. ++.|++|.|.             
T Consensus       225 ---g~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~  301 (406)
T KOG0295|consen  225 ---GYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGST  301 (406)
T ss_pred             ---ceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCC
Confidence               557889999999999999995555 7888999999999999998888887765 8889998763             


Q ss_pred             --CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         327 --SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       327 --~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                        +.++.+++.|++|++||+.++.   ++.++.+|..+|..++|+| ++++|+|+.+|+++++||++
T Consensus       302 ~~~~~l~s~SrDktIk~wdv~tg~---cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~  364 (406)
T KOG0295|consen  302 NGGQVLGSGSRDKTIKIWDVSTGM---CLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLK  364 (406)
T ss_pred             CCccEEEeecccceEEEEeccCCe---EEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEec
Confidence              2589999999999999999887   8899999999999999999 88999999999999999985

>KOG0645|consensus

Probab=100.00  E-value=3.3e-36  Score=232.27  Aligned_cols=249  Identities=24%  Similarity=0.430  Sum_probs=209.3

Q ss_pred             cccCCCCcEEEEEecCC---EEEEEECCCeEEEEcCCC-c--eEE-ec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         111 DCILHDDWVSAIDFHND---WILTGCYDHSVHIWTRRG-E--HKL-NI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~---~l~t~~~dg~i~iwd~~~-~--~~~-~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      .+.+|.++|..++|++.   .||+++.|..|+||+..+ .  .+. .+ .+|+..|++++|   +|.+++|++|+.|.++
T Consensus         9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAw---sp~g~~La~aSFD~t~   85 (312)
T KOG0645|consen    9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAW---SPHGRYLASASFDATV   85 (312)
T ss_pred             eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeee---cCCCcEEEEeeccceE
Confidence            45579999999999933   899999999999999863 2  222 11 379999999999   7789999999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      .||.  .....++++.++.||...|.|++|+++|++||+++.|+.|-||.+.....                        
T Consensus        86 ~Iw~--k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE------------------------  139 (312)
T KOG0645|consen   86 VIWK--KEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE------------------------  139 (312)
T ss_pred             EEee--cCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc------------------------
Confidence            9998  66778999999999999999999999999999999999999999975443                        


Q ss_pred             CCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecc---cCceeEEEECCe-eeEEEEECCCCCEEEEeeCCC
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAE---LGGMKSEIVGNK-SFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg  337 (391)
                        ..+...+..|...|..+.|+|. +.|++++.|.+|++|+-.   .-.+.+++.++. .+.+++|+|.|..|++++.|+
T Consensus       140 --fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~  217 (312)
T KOG0645|consen  140 --FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDG  217 (312)
T ss_pred             --EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCc
Confidence              5578889999999999999974 679999999999999876   335778888776 999999999999999999999


Q ss_pred             cEEEEcCCCCC-----cce-------------------E----------------EEEeccccCcEEEEEECCCCCCEEE
Q psy2107         338 QIRLYDPKVKE-----GAI-------------------V----------------KSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       338 ~i~iwd~~~~~-----~~~-------------------~----------------~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      +++||-..+.-     .+.                   .                ...-..|...|++++|+|....+|+
T Consensus       218 tv~Iw~~~~~~~~~~sr~~Y~v~W~~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~  297 (312)
T KOG0645|consen  218 TVSIWRLYTDLSGMHSRALYDVPWDNGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLA  297 (312)
T ss_pred             ceEeeeeccCcchhcccceEeeeecccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCcee
Confidence            99999833210     000                   0                0011247788999999996578899


Q ss_pred             EeeCCCcEEEEec
Q psy2107         378 SASFDNSVKLWDL  390 (391)
Q Consensus       378 s~~~dg~v~iwdl  390 (391)
                      +|++||.|++|.+
T Consensus       298 s~~DDG~v~~W~l  310 (312)
T KOG0645|consen  298 SGGDDGIVNFWEL  310 (312)
T ss_pred             ecCCCceEEEEEe
Confidence            9999999999987

>KOG0281|consensus

Probab=100.00  E-value=6.4e-39  Score=255.69  Aligned_cols=231  Identities=24%  Similarity=0.473  Sum_probs=205.9

Q ss_pred             CCCcEEEEEecCCEEEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         115 HDDWVSAIDFHNDWILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       115 h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ....|.|+.++.+.+++|..|++|+|||.+. .....+.+|++.|.|+.|     +...+++|+.|.+|++||++    +
T Consensus       196 ~skgVYClQYDD~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy-----d~rviisGSSDsTvrvWDv~----t  266 (499)
T KOG0281|consen  196 NSKGVYCLQYDDEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY-----DERVIVSGSSDSTVRVWDVN----T  266 (499)
T ss_pred             cCCceEEEEecchhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeec-----cceEEEecCCCceEEEEecc----C
Confidence            5678999999999999999999999999954 556688899999999999     66799999999999999976    5


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      .+++.++.+|...|..+.|+.  .++++++.|.++.+||+.....                          ......+.+
T Consensus       267 ge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~--------------------------it~rrVLvG  318 (499)
T KOG0281|consen  267 GEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTD--------------------------ITLRRVLVG  318 (499)
T ss_pred             CchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchH--------------------------HHHHHHHhh
Confidence            578889999999999999975  4899999999999999976332                          235567789


Q ss_pred             ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      |...|..+.|++ .++++++.|.+|++|++.++..++++.+|. .|-|+.+.  ++++++|+.|.+|++||+..+.   +
T Consensus       319 HrAaVNvVdfd~-kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQYr--~rlvVSGSSDntIRlwdi~~G~---c  392 (499)
T KOG0281|consen  319 HRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---C  392 (499)
T ss_pred             hhhheeeecccc-ceEEEecCCceEEEEeccceeeehhhhcccccceehhcc--CeEEEecCCCceEEEEeccccH---H
Confidence            999999999986 499999999999999999999999999887 78888774  8999999999999999999887   8


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++.+.||..-|.++.|..   ..+++|+.||+|+|||+.
T Consensus       393 LRvLeGHEeLvRciRFd~---krIVSGaYDGkikvWdl~  428 (499)
T KOG0281|consen  393 LRVLEGHEELVRCIRFDN---KRIVSGAYDGKIKVWDLQ  428 (499)
T ss_pred             HHHHhchHHhhhheeecC---ceeeeccccceEEEEecc
Confidence            889999999999999953   569999999999999974

>KOG0295|consensus

Probab=100.00  E-value=7.8e-37  Score=244.93  Aligned_cols=259  Identities=25%  Similarity=0.410  Sum_probs=228.4

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC--ceEEeccCCCCCeeEEEEEec
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG--EHKLNIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~  166 (391)
                      +.+.++.+|......-  ...+.||.+.|..++|+  |+++++++.|-.+++||...  +++..+.+|...|.++.|.|.
T Consensus       127 s~d~tikv~D~~tg~~--e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~  204 (406)
T KOG0295|consen  127 SEDATIKVFDTETGEL--ERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPL  204 (406)
T ss_pred             cCCceEEEEEccchhh--hhhhhccccceeEEEEecCccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEec
Confidence            3467777777654443  56677899999999998  88999999999999999943  566678899999999999775


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                         ++++++++.|.+|+.|++.    ...++.++.+|...|..++.+.||.++++++.|.++++|-+.+           
T Consensus       205 ---gd~ilS~srD~tik~We~~----tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t-----------  266 (406)
T KOG0295|consen  205 ---GDHILSCSRDNTIKAWECD----TGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVAT-----------  266 (406)
T ss_pred             ---CCeeeecccccceeEEecc----cceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEecc-----------
Confidence               6899999999999999976    6689999999999999999999999999999999999999977           


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEeccC----------------CeEEEEECCCeEEEEecccCceeE
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV----------------DEIITSSWDHTLKIWDAELGGMKS  310 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------------~~l~s~~~dg~i~iwd~~~~~~~~  310 (391)
                                        +.+...+..|+.+|.+++|.|.                ..+.+++.|++|++||+.++.++.
T Consensus       267 ------------------~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~  328 (406)
T KOG0295|consen  267 ------------------KQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLF  328 (406)
T ss_pred             ------------------chhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEE
Confidence                              3456677889999999988531                268899999999999999999999


Q ss_pred             EEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         311 EIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       311 ~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++.+|. .|..++|+|.|+||+++.+|+++++||++..+   +...+..|...|++++|+. +..+++||+-|.++++|.
T Consensus       329 tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~---cmk~~~ah~hfvt~lDfh~-~~p~VvTGsVdqt~KvwE  404 (406)
T KOG0295|consen  329 TLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQ---CMKTLEAHEHFVTSLDFHK-TAPYVVTGSVDQTVKVWE  404 (406)
T ss_pred             EEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccce---eeeccCCCcceeEEEecCC-CCceEEeccccceeeeee
Confidence            999887 89999999999999999999999999999877   7888889999999999998 555899999999999997


Q ss_pred             cC
Q psy2107         390 LR  391 (391)
Q Consensus       390 lr  391 (391)
                      -|
T Consensus       405 cr  406 (406)
T KOG0295|consen  405 CR  406 (406)
T ss_pred             cC
Confidence            54

>KOG0281|consensus

Probab=100.00  E-value=1.7e-38  Score=253.33  Aligned_cols=256  Identities=21%  Similarity=0.387  Sum_probs=221.0

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      ...++++++|......-  ...+.||++.|.|+.|+.+.+++|+.|.+|+|||+ +++.+.++..|...|..+.|     
T Consensus       213 GlrDnTikiWD~n~~~c--~~~L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf-----  285 (499)
T KOG0281|consen  213 GLRDNTIKIWDKNSLEC--LKILTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRF-----  285 (499)
T ss_pred             ccccCceEEeccccHHH--HHhhhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEE-----
Confidence            35788999998654332  34567999999999999999999999999999999 67888899999999999999     


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      .+.++++++.|.++.+||+.... ...+.+.+.||...|..+.|+  .+++++++.|.+|++|++.+             
T Consensus       286 ~ng~mvtcSkDrsiaVWdm~sps-~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~st-------------  349 (499)
T KOG0281|consen  286 SNGYMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTST-------------  349 (499)
T ss_pred             eCCEEEEecCCceeEEEeccCch-HHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEeccc-------------
Confidence            45699999999999999986444 455667788999999999996  45999999999999999977             


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS  327 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~  327 (391)
                                      ...+.++.+|+..|.|+.+.+ ..+++|+.|.+|++||+..|.+++.+.+|. -|.|+.|.  .
T Consensus       350 ----------------~efvRtl~gHkRGIAClQYr~-rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~  410 (499)
T KOG0281|consen  350 ----------------CEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--N  410 (499)
T ss_pred             ----------------eeeehhhhcccccceehhccC-eEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--C
Confidence                            457889999999999998864 678999999999999999999999999987 67889985  6


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcc------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         328 KLVITASADKQIRLYDPKVKEGA------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.+++|..||.|++||+.....+      .++..+..|++.|..+.|   +...+++++.|.+|-|||+
T Consensus       411 krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF---D~fqIvsssHddtILiWdF  476 (499)
T KOG0281|consen  411 KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF---DEFQIISSSHDDTILIWDF  476 (499)
T ss_pred             ceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee---cceEEEeccCCCeEEEEEc
Confidence            88999999999999999765433      245566779999999999   4577999999999999996

>KOG0284|consensus

Probab=100.00  E-value=5.3e-38  Score=255.11  Aligned_cols=258  Identities=22%  Similarity=0.366  Sum_probs=217.4

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCC-CCeeEEEEEecC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHG-GPVKGVAWLYND  167 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~l~~~~~~  167 (391)
                      +..+.+++|....+.-  ......|..+|+++.|+  +.++++|..+|.|++|+.....+..+..|. ..|++++|   +
T Consensus       115 s~SGEFtLWNg~~fnF--EtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlaf---S  189 (464)
T KOG0284|consen  115 SQSGEFTLWNGTSFNF--ETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAF---S  189 (464)
T ss_pred             cccccEEEecCceeeH--HHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheecc---C
Confidence            4556677876533322  22334599999999997  779999999999999999777777666655 99999999   5


Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      ++...|++++.||+|+|||....    .....+.+|.-.|++++|+|...+|++||.|..|++||.++            
T Consensus       190 pnDskF~t~SdDg~ikiWdf~~~----kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprS------------  253 (464)
T KOG0284|consen  190 PNDSKFLTCSDDGTIKIWDFRMP----KEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRS------------  253 (464)
T ss_pred             CCCceeEEecCCCeEEEEeccCC----chhheeccCCCCcceeccCCccceeEEccCCceeEeecCCC------------
Confidence            56778999999999999996533    33455689999999999999999999999999999999987            


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECC
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP  325 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p  325 (391)
                                       ..++.++.+|+..|..+.|++ .+.|+++|.|..++++|+++.+.++++++|. .++++.|+|
T Consensus       254 -----------------g~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP  316 (464)
T KOG0284|consen  254 -----------------GSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP  316 (464)
T ss_pred             -----------------cchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence                             447888999999999999994 4679999999999999999989999998665 899999999


Q ss_pred             C-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         326 L-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       326 ~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      - ..+|.+|+.||.|..|.+...+  .+...-.+|...|++++|+| -+.+|++|+.|.++++|.
T Consensus       317 ~~~~lftsgg~Dgsvvh~~v~~~~--p~~~i~~AHd~~iwsl~~hP-lGhil~tgsnd~t~rfw~  378 (464)
T KOG0284|consen  317 LNESLFTSGGSDGSVVHWVVGLEE--PLGEIPPAHDGEIWSLAYHP-LGHILATGSNDRTVRFWT  378 (464)
T ss_pred             ccccceeeccCCCceEEEeccccc--cccCCCcccccceeeeeccc-cceeEeecCCCcceeeec
Confidence            6 4588899999999999987322  23344568999999999999 778999999999999995

>KOG0316|consensus

Probab=100.00  E-value=3e-36  Score=228.00  Aligned_cols=242  Identities=24%  Similarity=0.395  Sum_probs=213.3

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+..|.++|.++.|+  |++.++++.|.+|++|+. .+..+.++.+|...|..++.   +.++..|++|+.|..+.+|
T Consensus        10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~---s~Dnskf~s~GgDk~v~vw   86 (307)
T KOG0316|consen   10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAAL---SSDNSKFASCGGDKAVQVW   86 (307)
T ss_pred             ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccc---cccccccccCCCCceEEEE
Confidence            34456799999999998  889999999999999998 88899999999999999998   6678899999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      |++    +++.++.+.+|.+.|+.++|+.+...+++|+.|..+++||.+.                           .+.
T Consensus        87 DV~----TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS---------------------------~s~  135 (307)
T KOG0316|consen   87 DVN----TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRS---------------------------RSF  135 (307)
T ss_pred             Ecc----cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEccc---------------------------CCC
Confidence            965    5678899999999999999999999999999999999999987                           335


Q ss_pred             CceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         266 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      +|++.+......|.++.... ..+++|+.||++|.||++.|+....+- ..+|++++|+++++..++++.|+++++.|-.
T Consensus       136 ePiQildea~D~V~Si~v~~-heIvaGS~DGtvRtydiR~G~l~sDy~-g~pit~vs~s~d~nc~La~~l~stlrLlDk~  213 (307)
T KOG0316|consen  136 EPIQILDEAKDGVSSIDVAE-HEIVAGSVDGTVRTYDIRKGTLSSDYF-GHPITSVSFSKDGNCSLASSLDSTLRLLDKE  213 (307)
T ss_pred             CccchhhhhcCceeEEEecc-cEEEeeccCCcEEEEEeecceeehhhc-CCcceeEEecCCCCEEEEeeccceeeecccc
Confidence            68888888888899988764 679999999999999999998765443 4589999999999999999999999999988


Q ss_pred             CCCcceEEEEeccccCcEEEE--EECCCCCCEEEEeeCCCcEEEEec
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSV--RWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~--~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++   ++..+.+|...=..+  +++. ....+++|+.||.|.+|||
T Consensus       214 tGk---lL~sYkGhkn~eykldc~l~q-sdthV~sgSEDG~Vy~wdL  256 (307)
T KOG0316|consen  214 TGK---LLKSYKGHKNMEYKLDCCLNQ-SDTHVFSGSEDGKVYFWDL  256 (307)
T ss_pred             hhH---HHHHhcccccceeeeeeeecc-cceeEEeccCCceEEEEEe
Confidence            877   888899998765544  4444 4568999999999999997

>KOG0273|consensus

Probab=100.00  E-value=1.7e-36  Score=250.68  Aligned_cols=270  Identities=20%  Similarity=0.352  Sum_probs=217.0

Q ss_pred             CcccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCC--ceE-E--ec----------cCCCCCeeEEEEEecCCCCe
Q psy2107         110 LDCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRG--EHK-L--NI----------PGHGGPVKGVAWLYNDGKDA  171 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~--~~~-~--~~----------~~~~~~v~~l~~~~~~~~~~  171 (391)
                      .....|..+|.+.+|++   ..+++|+.|...++|++..  ... .  .+          ......|++++|   +.+|.
T Consensus       172 ~kvl~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~W---n~~G~  248 (524)
T KOG0273|consen  172 AKVLRHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDW---NNDGT  248 (524)
T ss_pred             eeeccCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEe---cCCCC
Confidence            34455999999999993   3899999999999999832  100 0  01          123468999999   88899


Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC---
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE---  248 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~---  248 (391)
                      .||+|+.||.+++|+.     ....+.++..|+++|.++.|+..|.+|++++.||++.+||..++...........+   
T Consensus       249 ~LatG~~~G~~riw~~-----~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lD  323 (524)
T KOG0273|consen  249 LLATGSEDGEARIWNK-----DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALD  323 (524)
T ss_pred             eEEEeecCcEEEEEec-----CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccc
Confidence            9999999999999983     34567788889999999999999999999999999999999877654433222111   


Q ss_pred             ---------CccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-e
Q psy2107         249 ---------GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-S  317 (391)
Q Consensus       249 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~  317 (391)
                               ..................|+.++.+|.+.|.++.|+|.+. |++++.|++++||+.........+..|. .
T Consensus       324 VdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hske  403 (524)
T KOG0273|consen  324 VDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKE  403 (524)
T ss_pred             eEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccc
Confidence                     1111111111222334668889999999999999997654 8899999999999999888888888776 8


Q ss_pred             eEEEEECCCC---------CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         318 FFDVHYSPLS---------KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       318 i~~~~~~p~~---------~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      |..+.|+|.|         ..+++++.|++|++||+..+.   ++..+..|..+|.+++|+| ++.++|+|+.||.|.+|
T Consensus       404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv---~i~~f~kH~~pVysvafS~-~g~ylAsGs~dg~V~iw  479 (524)
T KOG0273|consen  404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV---PIHTLMKHQEPVYSVAFSP-NGRYLASGSLDGCVHIW  479 (524)
T ss_pred             eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc---eeEeeccCCCceEEEEecC-CCcEEEecCCCCeeEec
Confidence            9999999965         478999999999999998877   8889999999999999999 77899999999999999


Q ss_pred             ecC
Q psy2107         389 DLR  391 (391)
Q Consensus       389 dlr  391 (391)
                      +.+
T Consensus       480 s~~  482 (524)
T KOG0273|consen  480 STK  482 (524)
T ss_pred             ccc
Confidence            875

>KOG0282|consensus

Probab=100.00  E-value=3.6e-37  Score=255.51  Aligned_cols=245  Identities=22%  Similarity=0.417  Sum_probs=209.6

Q ss_pred             CCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107         105 PTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD  179 (391)
Q Consensus       105 ~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d  179 (391)
                      |........+|+..|+++.|.   +.+|++++.|+.|+||++  ++.++.++.+|..+|.+++|   ++++..|++++.|
T Consensus       203 Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~---s~~g~~fLS~sfD  279 (503)
T KOG0282|consen  203 PKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASF---NNCGTSFLSASFD  279 (503)
T ss_pred             cHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhc---cccCCeeeeeecc
Confidence            444456778999999999997   569999999999999999  57888999999999999999   8899999999999


Q ss_pred             CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      +.+++||.+    +++++..+.. ...++|+.|+|++ +.+++|+.|+.|+.||+++++                     
T Consensus       280 ~~lKlwDtE----TG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~k---------------------  333 (503)
T KOG0282|consen  280 RFLKLWDTE----TGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGK---------------------  333 (503)
T ss_pred             eeeeeeccc----cceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccchH---------------------
Confidence            999999954    4566666653 5678999999988 889999999999999998844                     


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE------------------------
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV------------------------  313 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------  313 (391)
                              .++.+..|-+.|..+.|-+++ ++++++.|++++||+.+.+..+....                        
T Consensus       334 --------vvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~  405 (503)
T KOG0282|consen  334 --------VVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSM  405 (503)
T ss_pred             --------HHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhcc
Confidence                    567778899999999999655 59999999999999976543322111                        


Q ss_pred             ----------------------CC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         314 ----------------------GN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       314 ----------------------~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                                            +|   +.-..+.|||||.+|++|+.||.+.+||.++-+   ++..+.+|.+++..+.|
T Consensus       406 dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~k---l~~~lkah~~~ci~v~w  482 (503)
T KOG0282|consen  406 DNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTK---LVSKLKAHDQPCIGVDW  482 (503)
T ss_pred             CceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhh---hhhccccCCcceEEEEe
Confidence                                  01   124568999999999999999999999998766   88899999999999999


Q ss_pred             CCCCCCEEEEeeCCCcEEEEe
Q psy2107         369 SPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +|.....+|||+.||.|++||
T Consensus       483 HP~e~Skvat~~w~G~Ikiwd  503 (503)
T KOG0282|consen  483 HPVEPSKVATCGWDGLIKIWD  503 (503)
T ss_pred             cCCCcceeEecccCceeEecC
Confidence            998888999999999999997

>KOG0284|consensus

Probab=100.00  E-value=3.1e-37  Score=250.71  Aligned_cols=234  Identities=24%  Similarity=0.459  Sum_probs=205.1

Q ss_pred             CcEEEEEec--CCEEEEEECCCeEEEEcCCCceE-EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHK-LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      -.|..+.|.  |+.|++|+..|.+.+|+...-.. ..+..|..+|+++.|   +.++..+++|+.+|.|++|+.+.    
T Consensus        97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~w---s~~g~wmiSgD~gG~iKyWqpnm----  169 (464)
T KOG0284|consen   97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKW---SHNGTWMISGDKGGMIKYWQPNM----  169 (464)
T ss_pred             cceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEE---ccCCCEEEEcCCCceEEecccch----
Confidence            478888997  67999999999999999854332 245689999999999   77899999999999999998542    


Q ss_pred             eeEEEEEecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         194 IECIHVCRGHE-RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       194 ~~~~~~~~~~~-~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                       ..+..+..|. ..|++++|+|+...|++++.||+|+|||....+                             ....+.
T Consensus       170 -nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k-----------------------------ee~vL~  219 (464)
T KOG0284|consen  170 -NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK-----------------------------EERVLR  219 (464)
T ss_pred             -hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc-----------------------------hhheec
Confidence             2344445554 899999999999999999999999999997633                             445678


Q ss_pred             CccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc
Q psy2107         273 GHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA  350 (391)
Q Consensus       273 ~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~  350 (391)
                      +|.-.|.++.|+|. +.+++++.|..|++||.+++.++.++..|+ .|..+.|+|++++|+++|.|..+++||+++.+  
T Consensus       220 GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mk--  297 (464)
T KOG0284|consen  220 GHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMK--  297 (464)
T ss_pred             cCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhH--
Confidence            99999999999964 679999999999999999999999998887 89999999999999999999999999999655  


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       -+..+++|+..|+++.|+|-...+|.+|+.||.|..|.+
T Consensus       298 -El~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v  336 (464)
T KOG0284|consen  298 -ELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVV  336 (464)
T ss_pred             -HHHHhhcchhhheeeccccccccceeeccCCCceEEEec
Confidence             567889999999999999999999999999999999975

>KOG0263|consensus

Probab=100.00  E-value=5.2e-36  Score=262.83  Aligned_cols=233  Identities=21%  Similarity=0.379  Sum_probs=202.6

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.||.++|....|+  .++|++++.|+++|+|.+ +...+..+.+|..+|+.+.|   +|.|-+|||++.|++.++|.
T Consensus       445 ~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F---~P~GyYFatas~D~tArLWs  521 (707)
T KOG0263|consen  445 RTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQF---APRGYYFATASHDQTARLWS  521 (707)
T ss_pred             EEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEe---cCCceEEEecCCCceeeeee
Confidence            4477899999999999  459999999999999999 55677788999999999999   66799999999999999998


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      .+    ...+++.+.+|.+.|.|++|+|+..++++||.|.++++||+.+                             ..
T Consensus       522 ~d----~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~-----------------------------G~  568 (707)
T KOG0263|consen  522 TD----HNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST-----------------------------GN  568 (707)
T ss_pred             cc----cCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCC-----------------------------Cc
Confidence            44    4578899999999999999999999999999999999999977                             44


Q ss_pred             ceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      .++.+.||.++|.+++|+|.|+ |++|+.||.|.+||+.++..+..+..|. .|.++.|+.+|..||+|+.|++|++||+
T Consensus       569 ~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~  648 (707)
T KOG0263|consen  569 SVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL  648 (707)
T ss_pred             EEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence            6888999999999999997766 9999999999999999999998888776 7899999999999999999999999998


Q ss_pred             CCCCc---------------------ceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         345 KVKEG---------------------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       345 ~~~~~---------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      .....                     ..++..+.....+|.++.|.- ....|+.|
T Consensus       649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~Ftr-rNl~L~~g  703 (707)
T KOG0263|consen  649 TKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTR-RNLLLAVG  703 (707)
T ss_pred             hhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEec-cceeEEec
Confidence            64321                     124556666777899999986 44444444

>KOG0265|consensus

Probab=100.00  E-value=1.5e-34  Score=226.27  Aligned_cols=271  Identities=20%  Similarity=0.303  Sum_probs=222.1

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC--CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR--GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      .+.+.+|.+.|..+.|+  |.+||+|+.|..|.+|++.  -+....+.+|+++|..+.|   ..+++.+++++.|.+|+.
T Consensus        40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~---~~d~s~i~S~gtDk~v~~  116 (338)
T KOG0265|consen   40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHG---MRDGSHILSCGTDKTVRG  116 (338)
T ss_pred             hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeee---ccCCCEEEEecCCceEEE
Confidence            45677899999999998  6699999999999999983  4556688899999999999   778999999999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCC------------CCCCcc
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSEN------------GDEGTT  251 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~------------~~~~~~  251 (391)
                      ||.+    +.++.+.+++|.+-|.++..+.-| .++.+|+.||++++||+++......+...            .+....
T Consensus       117 wD~~----tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~sg  192 (338)
T KOG0265|consen  117 WDAE----TGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVISG  192 (338)
T ss_pred             Eecc----cceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEecccccceeec
Confidence            9965    557788899999999999855544 45678899999999999966554433111            111222


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC----ceeEEEECCe-----eeEEE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG----GMKSEIVGNK-----SFFDV  321 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~-----~i~~~  321 (391)
                      ........|+.........+.+|..+|+.+..++.+ .+++-+.|.++++||++-.    .++..+.++.     ....+
T Consensus       193 gIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~c  272 (338)
T KOG0265|consen  193 GIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKC  272 (338)
T ss_pred             cccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhccee
Confidence            233334567777788899999999999999999554 5888899999999999743    3466666543     56778


Q ss_pred             EECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         322 HYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+|+++.+.+|+.|..+++||.....   ++..+.+|.+.|++++|+| ...++.+++.|.+|++=.+
T Consensus       273 swsp~~~~i~ags~dr~vyvwd~~~r~---~lyklpGh~gsvn~~~Fhp-~e~iils~~sdk~i~lgei  337 (338)
T KOG0265|consen  273 SWSPNGTKITAGSADRFVYVWDTTSRR---ILYKLPGHYGSVNEVDFHP-TEPIILSCSSDKTIYLGEI  337 (338)
T ss_pred             eccCCCCccccccccceEEEeeccccc---EEEEcCCcceeEEEeeecC-CCcEEEEeccCceeEeecc
Confidence            999999999999999999999987766   8889999999999999999 6678999999999987443

>KOG0266|consensus

Probab=100.00  E-value=2.2e-34  Score=258.35  Aligned_cols=277  Identities=25%  Similarity=0.436  Sum_probs=232.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++|+.+..          .+.++.+.+|............+.+|...|++++|+  ++++++++.|++|+|||+
T Consensus       163 ~~~~fs~~g~~l~~----------~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~  232 (456)
T KOG0266|consen  163 TCVDFSPDGRALAA----------ASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDL  232 (456)
T ss_pred             EEEEEcCCCCeEEE----------ccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeec
Confidence            45688999988765          457788888887444422334447899999999998  679999999999999999


Q ss_pred             -CC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE
Q psy2107         144 -RG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT  221 (391)
Q Consensus       144 -~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s  221 (391)
                       .. ..+..+.+|...|++++|   ++.++++++|+.|++|++||++    ..+++..+.+|.+.|++++|++++++|++
T Consensus       233 ~~~~~~~~~l~gH~~~v~~~~f---~p~g~~i~Sgs~D~tvriWd~~----~~~~~~~l~~hs~~is~~~f~~d~~~l~s  305 (456)
T KOG0266|consen  233 KDDGRNLKTLKGHSTYVTSVAF---SPDGNLLVSGSDDGTVRIWDVR----TGECVRKLKGHSDGISGLAFSPDGNLLVS  305 (456)
T ss_pred             cCCCeEEEEecCCCCceEEEEe---cCCCCEEEEecCCCcEEEEecc----CCeEEEeeeccCCceEEEEECCCCCEEEE
Confidence             44 677889999999999999   6677999999999999999965    36889999999999999999999999999


Q ss_pred             EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC--cccEEEeccCC-eEEEEECCCeE
Q psy2107         222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE--AISAVQWTAVD-EIITSSWDHTL  298 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~dg~i  298 (391)
                      ++.|+.|++||+.++...                           +...+.++..  +++++.|++++ ++++++.|+.+
T Consensus       306 ~s~d~~i~vwd~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~  358 (456)
T KOG0266|consen  306 ASYDGTIRVWDLETGSKL---------------------------CLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTL  358 (456)
T ss_pred             cCCCccEEEEECCCCcee---------------------------eeecccCCCCCCceeEEEECCCCcEEEEecCCCeE
Confidence            999999999999874420                           2344444444  59999999655 58899999999


Q ss_pred             EEEecccCceeEEEECCe----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCC
Q psy2107         299 KIWDAELGGMKSEIVGNK----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDP  373 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~  373 (391)
                      ++||+..+.....+..+.    .+.+...++.+.++++|+.|+.|++||+.++.   .+..+.+| ...+..++|+| ..
T Consensus       359 ~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~---~~~~l~~h~~~~~~~~~~~~-~~  434 (456)
T KOG0266|consen  359 KLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGG---ILQRLEGHSKAAVSDLSSHP-TE  434 (456)
T ss_pred             EEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCCccc---hhhhhcCCCCCceeccccCC-Cc
Confidence            999999999888887664    34455667889999999999999999998765   67788899 89999999999 77


Q ss_pred             CEEEEee--CCCcEEEEec
Q psy2107         374 QLFVSAS--FDNSVKLWDL  390 (391)
Q Consensus       374 ~~l~s~~--~dg~v~iwdl  390 (391)
                      .++++++  .|+.+++|..
T Consensus       435 ~~~~s~s~~~d~~~~~w~~  453 (456)
T KOG0266|consen  435 NLIASSSFEGDGLIRLWKY  453 (456)
T ss_pred             CeeeecCcCCCceEEEecC
Confidence            8899988  7899999964

>KOG0277|consensus

Probab=100.00  E-value=3.2e-35  Score=224.88  Aligned_cols=242  Identities=21%  Similarity=0.389  Sum_probs=207.0

Q ss_pred             cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ....-.+.+..++|+   .+.+++++.||+++|||+  ....+..++.|...|.++.|.+.  ....+++++.|++|++|
T Consensus        55 ~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~--~r~~~ltsSWD~TiKLW  132 (311)
T KOG0277|consen   55 QSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTV--RRRIFLTSSWDGTIKLW  132 (311)
T ss_pred             EeeecccceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccc--cceeEEeeccCCceEee
Confidence            334467789999998   569999999999999998  45678889999999999999654  56678888999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +..    ....+.++.+|...|...+|+| ..+++++++.|+.+++||++..                            
T Consensus       133 ~~~----r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~----------------------------  180 (311)
T KOG0277|consen  133 DPN----RPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP----------------------------  180 (311)
T ss_pred             cCC----CCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC----------------------------
Confidence            954    4567888999999999999999 5789999999999999999752                            


Q ss_pred             CCceeeecCccCcccEEEec--cCCeEEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEEECCC-CCEEEEeeCCCcE
Q psy2107         265 RTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVHYSPL-SKLVITASADKQI  339 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~-~~~l~~g~~dg~i  339 (391)
                      .+. ..+..|...+.++.|+  +...+++|+.|+.|++||+++- .++..+.+|. .|..++|||. ...|++++.|-++
T Consensus       181 gk~-~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~  259 (311)
T KOG0277|consen  181 GKF-MSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTV  259 (311)
T ss_pred             Cce-eEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceE
Confidence            223 3388899999999999  5567999999999999999874 4677787777 8999999997 4589999999999


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +|||.....  ..+.+...|+..|..+.|++..+.++|+++.|+.++||+
T Consensus       260 riw~~~~~d--s~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~  307 (311)
T KOG0277|consen  260 RIWDPERQD--SAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN  307 (311)
T ss_pred             Eecccccch--hhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence            999987533  255677789999999999998888999999999999998

>KOG0315|consensus

Probab=100.00  E-value=3.2e-34  Score=218.77  Aligned_cols=228  Identities=17%  Similarity=0.303  Sum_probs=194.9

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      +-+|+++++|-+||+|.. ++.+..+++...+.|+.+..   .++...||+++ ...||+||++  +....++.++.+|.
T Consensus        10 ~viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLei---Tpdk~~LAaa~-~qhvRlyD~~--S~np~Pv~t~e~h~   83 (311)
T KOG0315|consen   10 PVILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEI---TPDKKDLAAAG-NQHVRLYDLN--SNNPNPVATFEGHT   83 (311)
T ss_pred             ceEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEE---cCCcchhhhcc-CCeeEEEEcc--CCCCCceeEEeccC
Confidence            348999999999999998 77777888877889999999   67788888777 5679999976  44556899999999


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      +.|+++.|..+|+.+++||+||+++|||++...                              ......|..+|+++..+
T Consensus        84 kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~------------------------------~qR~~~~~spVn~vvlh  133 (311)
T KOG0315|consen   84 KNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS------------------------------CQRNYQHNSPVNTVVLH  133 (311)
T ss_pred             CceEEEEEeecCeEEEecCCCceEEEEeccCcc------------------------------cchhccCCCCcceEEec
Confidence            999999999999999999999999999998622                              22334577999999999


Q ss_pred             cC-CeEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc---ceEEEEecc
Q psy2107         285 AV-DEIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG---AIVKSTFSS  358 (391)
Q Consensus       285 ~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~~~~  358 (391)
                      |+ ..|++|..+|.|++||+....+...+...  .++.++...|+|.+++++...|..++|++-....   ..++..++.
T Consensus       134 pnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~a  213 (311)
T KOG0315|consen  134 PNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQA  213 (311)
T ss_pred             CCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheec
Confidence            65 46999999999999999988766665443  3899999999999999999999999999865432   345667889


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |.+.+..+.+|| +.++|+++|.|.+++||+.
T Consensus       214 h~~~il~C~lSP-d~k~lat~ssdktv~iwn~  244 (311)
T KOG0315|consen  214 HNGHILRCLLSP-DVKYLATCSSDKTVKIWNT  244 (311)
T ss_pred             ccceEEEEEECC-CCcEEEeecCCceEEEEec
Confidence            999999999999 7789999999999999985

>KOG0286|consensus

Probab=100.00  E-value=3.5e-34  Score=223.45  Aligned_cols=210  Identities=24%  Similarity=0.398  Sum_probs=187.0

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~  227 (391)
                      ...+++|.+.|.++.|   +++.+.+++++.||.+.|||.-    +...++.+.-....|..++|+|.++++|+|+.|+.
T Consensus        48 rr~LkGH~~Ki~~~~w---s~Dsr~ivSaSqDGklIvWDs~----TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~  120 (343)
T KOG0286|consen   48 RRTLKGHLNKIYAMDW---STDSRRIVSASQDGKLIVWDSF----TTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNK  120 (343)
T ss_pred             EEEecccccceeeeEe---cCCcCeEEeeccCCeEEEEEcc----cccceeEEecCceeEEEEEECCCCCeEEecCcCce
Confidence            3678899999999999   7789999999999999999943    33345566667889999999999999999999999


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      ..||++.+.....                       .......+.+|.+.+.|..|.+++.|++++.|.+..+||+++++
T Consensus       121 Csiy~ls~~d~~g-----------------------~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~  177 (343)
T KOG0286|consen  121 CSIYPLSTRDAEG-----------------------NVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQ  177 (343)
T ss_pred             eEEEecccccccc-----------------------cceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccce
Confidence            9999997532211                       12345568899999999999999999999999999999999999


Q ss_pred             eeEEEECCe-eeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         308 MKSEIVGNK-SFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       308 ~~~~~~~~~-~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      .+..+.+|. .|.+++++| +++.+++|+-|+..++||++.+.   +.+.+.+|...|++++|.| ++.-++||++|++.
T Consensus       178 ~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~---c~qtF~ghesDINsv~ffP-~G~afatGSDD~tc  253 (343)
T KOG0286|consen  178 QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQ---CVQTFEGHESDINSVRFFP-SGDAFATGSDDATC  253 (343)
T ss_pred             EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcc---eeEeecccccccceEEEcc-CCCeeeecCCCcee
Confidence            999999887 899999999 89999999999999999999876   8899999999999999999 66789999999999


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      ++||||
T Consensus       254 RlyDlR  259 (343)
T KOG0286|consen  254 RLYDLR  259 (343)
T ss_pred             EEEeec
Confidence            999997

>KOG0296|consensus

Probab=100.00  E-value=6.3e-34  Score=228.40  Aligned_cols=286  Identities=16%  Similarity=0.216  Sum_probs=222.3

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      ..+..--+|.....+  .+..+.+|++.|+|+.|+  |.+||||..+|.|+||.. ++.....+......+.=+.|   +
T Consensus        83 GgDD~AflW~~~~ge--~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~W---H  157 (399)
T KOG0296|consen   83 GGDDLAFLWDISTGE--FAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKW---H  157 (399)
T ss_pred             CCCceEEEEEccCCc--ceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEe---c
Confidence            356666777765554  577888999999999998  779999999999999999 55555566545555666666   6


Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC-
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG-  246 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-  246 (391)
                      |.+..|++|+.||.+.+|.+.  .  ....+.+.+|..++++=.|.|+|+.+++|..||+|++|++.++.+........ 
T Consensus       158 p~a~illAG~~DGsvWmw~ip--~--~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~  233 (399)
T KOG0296|consen  158 PRAHILLAGSTDGSVWMWQIP--S--QALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEG  233 (399)
T ss_pred             ccccEEEeecCCCcEEEEECC--C--cceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEeccccc
Confidence            678899999999999999965  2  25677889999999999999999999999999999999999987654332110 


Q ss_pred             ------------CCCcccccc-ccccccCCCCCceeeec--------CccCcccEEEeccC----CeEEEEECCCeEEEE
Q psy2107         247 ------------DEGTTSKKR-KKEYSSASSRTPLITLK--------GHKEAISAVQWTAV----DEIITSSWDHTLKIW  301 (391)
Q Consensus       247 ------------~~~~~~~~~-~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~----~~l~s~~~dg~i~iw  301 (391)
                                  ......... ........+.+.+....        .+...+.++.+.|.    ...++|+-||+|.||
T Consensus       234 ~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iy  313 (399)
T KOG0296|consen  234 LELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIY  313 (399)
T ss_pred             CcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEE
Confidence                        000000111 11111122222222222        34555666666532    247788999999999


Q ss_pred             ecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         302 DAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       302 d~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      |+...++.....+..+|..+.|-+ ..+|++++.+|.|+.||.|+++   ++..+.+|...|.+++.+| +.++++|+|.
T Consensus       314 D~a~~~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~---l~~~y~GH~~~Il~f~ls~-~~~~vvT~s~  388 (399)
T KOG0296|consen  314 DLAASTLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQ---LKFTYTGHQMGILDFALSP-QKRLVVTVSD  388 (399)
T ss_pred             ecccchhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccc---eEEEEecCchheeEEEEcC-CCcEEEEecC
Confidence            999999988899999999999998 7899999999999999999988   8999999999999999999 7789999999


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      |++.+||++
T Consensus       389 D~~a~VF~v  397 (399)
T KOG0296|consen  389 DNTALVFEV  397 (399)
T ss_pred             CCeEEEEec
Confidence            999999986

>KOG0291|consensus

Probab=100.00  E-value=1.6e-33  Score=245.70  Aligned_cols=278  Identities=23%  Similarity=0.350  Sum_probs=222.1

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      +..+|..|.+++.+          .+.+-..+++.........+..+.+|++.|-+.-|.  ...++|.+.||.+.+|..
T Consensus       149 ~si~Ws~DSr~l~~----------gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~  218 (893)
T KOG0291|consen  149 TSIDWSDDSRLLVT----------GSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTC  218 (893)
T ss_pred             eEEEeccCCceEEe----------ccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEe
Confidence            56788888888765          356777788888777777788889999999998887  448999999999999965


Q ss_pred             C------------------------Cce-----------EEeccCCCCCeeEEEEEec----------------------
Q psy2107         144 R------------------------GEH-----------KLNIPGHGGPVKGVAWLYN----------------------  166 (391)
Q Consensus       144 ~------------------------~~~-----------~~~~~~~~~~v~~l~~~~~----------------------  166 (391)
                      +                        ++.           ..-+......|++.+|++.                      
T Consensus       219 ~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~  298 (893)
T KOG0291|consen  219 DLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFN  298 (893)
T ss_pred             cCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecCCce
Confidence            4                        111           0001112244555555221                      


Q ss_pred             -----------------CCCCeEEEEEeCC-CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy2107         167 -----------------DGKDAAFISVSTD-QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLL  228 (391)
Q Consensus       167 -----------------~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i  228 (391)
                                       +..|+.+|.|+.. |.+.||++..    -..+...++|...+++++++|||+++++|+.||.|
T Consensus       299 lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqs----EsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV  374 (893)
T KOG0291|consen  299 LIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQS----ESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV  374 (893)
T ss_pred             EEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeec----cceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence                             3334445544432 5555665542    23455667899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCc
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      ++||...                             .-+..++..|+..|+.+.|+ .++.+++++.||+|+.||+...+
T Consensus       375 KvWn~~S-----------------------------gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYr  425 (893)
T KOG0291|consen  375 KVWNTQS-----------------------------GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYR  425 (893)
T ss_pred             EEEeccC-----------------------------ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccc
Confidence            9999965                             45889999999999999999 55669999999999999999999


Q ss_pred             eeEEEECCe--eeEEEEECCCCCEEEEeeCCC-cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         308 MKSEIVGNK--SFFDVHYSPLSKLVITASADK-QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       308 ~~~~~~~~~--~i~~~~~~p~~~~l~~g~~dg-~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      ..+++..+.  ...|++..|.|..+++|+.|. .|.+|++.+++   ++-.+.||.++|.+++|+| .+..|+|+|+|.+
T Consensus       426 NfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq---llDiLsGHEgPVs~l~f~~-~~~~LaS~SWDkT  501 (893)
T KOG0291|consen  426 NFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ---LLDILSGHEGPVSGLSFSP-DGSLLASGSWDKT  501 (893)
T ss_pred             eeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe---eeehhcCCCCcceeeEEcc-ccCeEEeccccce
Confidence            999998877  567899999999999998886 69999999988   8889999999999999999 6679999999999


Q ss_pred             EEEEec
Q psy2107         385 VKLWDL  390 (391)
Q Consensus       385 v~iwdl  390 (391)
                      ||+||+
T Consensus       502 VRiW~i  507 (893)
T KOG0291|consen  502 VRIWDI  507 (893)
T ss_pred             EEEEEe
Confidence            999996

>KOG0319|consensus

Probab=100.00  E-value=5.3e-35  Score=254.30  Aligned_cols=251  Identities=26%  Similarity=0.370  Sum_probs=214.5

Q ss_pred             cCCCCCCcccCCCCcEEEEE-ec-CCEEEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEE
Q psy2107         104 TPTPSPLDCILHDDWVSAID-FH-NDWILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISV  176 (391)
Q Consensus       104 ~~~~~~~~~~~h~~~V~~~~-~~-~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~  176 (391)
                      .+.+...-+.||++.|.++. ++ |.+|+||+.|.++++|.++.     ..+....+|.+.|.+++++..  ...+|+++
T Consensus       353 ~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~--~asffvsv  430 (775)
T KOG0319|consen  353 LPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKL--GASFFVSV  430 (775)
T ss_pred             cCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeeccc--CccEEEEe
Confidence            34444456778999999999 44 77999999999999997732     233356699999999999432  45699999


Q ss_pred             eCCCcEEEEeecCCCCcee-EE----EEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         177 STDQTAMIWEWKVESNSIE-CI----HVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       177 ~~dg~v~iwd~~~~~~~~~-~~----~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      |.|+++++|++........ ..    .....|...|+|++++|+.+++++||.|++.++|+++.                
T Consensus       431 S~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~----------------  494 (775)
T KOG0319|consen  431 SQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQ----------------  494 (775)
T ss_pred             cCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccC----------------
Confidence            9999999999864222211 11    13357999999999999999999999999999999974                


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKL  329 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~  329 (391)
                                   .....++.+|...|.++.|++. ..++++|.|++|+||.+.+..++.++.+|. .|..+.|-.+|+.
T Consensus       495 -------------~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~q  561 (775)
T KOG0319|consen  495 -------------LRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQ  561 (775)
T ss_pred             -------------ceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcE
Confidence                         4578899999999999999954 569999999999999999999999999776 8999999999999


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      |++++.||-|++|++.+..   +...+.+|...|++++.+| ...+++||+.||.|.+|.
T Consensus       562 liS~~adGliKlWnikt~e---C~~tlD~H~DrvWaL~~~~-~~~~~~tgg~Dg~i~~wk  617 (775)
T KOG0319|consen  562 LISAGADGLIKLWNIKTNE---CEMTLDAHNDRVWALSVSP-LLDMFVTGGGDGRIIFWK  617 (775)
T ss_pred             EEeccCCCcEEEEeccchh---hhhhhhhccceeEEEeecC-ccceeEecCCCeEEEEee
Confidence            9999999999999999888   8999999999999999999 556899999999999994

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=5.1e-33  Score=267.75  Aligned_cols=279  Identities=19%  Similarity=0.287  Sum_probs=218.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCC-----CCCCcccCCCCcEEEEEec---CCEEEEEECCCe
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPT-----PSPLDCILHDDWVSAIDFH---NDWILTGCYDHS  137 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~  137 (391)
                      ...+|.++|+++++          ...++.+.+|.......     ..+.....+...|.+++|+   +.+|++++.||+
T Consensus       487 ~~i~fs~dg~~lat----------gg~D~~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~  556 (793)
T PLN00181        487 CAIGFDRDGEFFAT----------AGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGV  556 (793)
T ss_pred             EEEEECCCCCEEEE----------EeCCCEEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeCCCe
Confidence            34588888887765          34688899997643211     1122223456789999996   569999999999


Q ss_pred             EEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc-CC
Q psy2107         138 VHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS-ES  215 (391)
Q Consensus       138 i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~  215 (391)
                      |++||+ ++..+..+.+|.+.|++++|+|.  ++.+|++|+.||+|++||++    ....+..+..+ ..|.++.|+ ++
T Consensus       557 v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~--~~~~L~Sgs~Dg~v~iWd~~----~~~~~~~~~~~-~~v~~v~~~~~~  629 (793)
T PLN00181        557 VQVWDVARSQLVTEMKEHEKRVWSIDYSSA--DPTLLASGSDDGSVKLWSIN----QGVSIGTIKTK-ANICCVQFPSES  629 (793)
T ss_pred             EEEEECCCCeEEEEecCCCCCEEEEEEcCC--CCCEEEEEcCCCEEEEEECC----CCcEEEEEecC-CCeEEEEEeCCC
Confidence            999999 45667788899999999999542  67899999999999999975    23455566544 679999995 57


Q ss_pred             CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECC
Q psy2107         216 RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD  295 (391)
Q Consensus       216 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d  295 (391)
                      +.+|++|+.||.|++||+++.+                            .+...+.+|...|.++.|.++..+++++.|
T Consensus       630 g~~latgs~dg~I~iwD~~~~~----------------------------~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D  681 (793)
T PLN00181        630 GRSLAFGSADHKVYYYDLRNPK----------------------------LPLCTMIGHSKTVSYVRFVDSSTLVSSSTD  681 (793)
T ss_pred             CCEEEEEeCCCeEEEEECCCCC----------------------------ccceEecCCCCCEEEEEEeCCCEEEEEECC
Confidence            8999999999999999997532                            145567789999999999987889999999


Q ss_pred             CeEEEEecccC------ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce----------EEEEecc
Q psy2107         296 HTLKIWDAELG------GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI----------VKSTFSS  358 (391)
Q Consensus       296 g~i~iwd~~~~------~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~----------~~~~~~~  358 (391)
                      ++|++||++.+      ..+..+.+|. .+.+++|+|++.+|++|+.|+.|++|+........          .......
T Consensus       682 ~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~  761 (793)
T PLN00181        682 NTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDD  761 (793)
T ss_pred             CEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCC
Confidence            99999999753      4566777665 67889999999999999999999999976432110          0011234


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |...|.+++|+| ++..|++|+.||.|+||++
T Consensus       762 ~~~~V~~v~ws~-~~~~lva~~~dG~I~i~~~  792 (793)
T PLN00181        762 ASQFISSVCWRG-QSSTLVAANSTGNIKILEM  792 (793)
T ss_pred             CCcEEEEEEEcC-CCCeEEEecCCCcEEEEec
Confidence            566799999999 6678999999999999997

>KOG0276|consensus

Probab=100.00  E-value=2.1e-34  Score=246.26  Aligned_cols=240  Identities=21%  Similarity=0.377  Sum_probs=214.6

Q ss_pred             ccCCCCcEEEEEecC--CEEEEEECCCeEEEEcCCCc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         112 CILHDDWVSAIDFHN--DWILTGCYDHSVHIWTRRGE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       112 ~~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      +..|+++|.++.+++  .+++++-++|.|.|||.+++ .+..+.-..-+|++..|.+   ..+.+++|+.|..|++|+++
T Consensus         9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia---RknWiv~GsDD~~IrVfnyn   85 (794)
T KOG0276|consen    9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA---RKNWIVTGSDDMQIRVFNYN   85 (794)
T ss_pred             hhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee---ccceEEEecCCceEEEEecc
Confidence            345889999999994  49999999999999999554 4556777788999999965   46799999999999999975


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                          +.+.+..|..|.+-|.|++.+|...+++++|.|-.|++||.+.                            ...+.
T Consensus        86 ----t~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~----------------------------~wa~~  133 (794)
T KOG0276|consen   86 ----TGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN----------------------------EWACE  133 (794)
T ss_pred             ----cceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccC----------------------------ceeee
Confidence                6678999999999999999999999999999999999999975                            24578


Q ss_pred             eeecCccCcccEEEecc--CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC--CEEEEeeCCCcEEEEc
Q psy2107         269 ITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS--KLVITASADKQIRLYD  343 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~--~~l~~g~~dg~i~iwd  343 (391)
                      +++.+|+..|.+++|+|  .+.+++++.|++|++|.+.+..+..++.+|. .|+|+.+-+.|  .+|++|++|..|+|||
T Consensus       134 qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWD  213 (794)
T KOG0276|consen  134 QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWD  213 (794)
T ss_pred             eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEee
Confidence            89999999999999995  4569999999999999999999999999886 89999998755  5999999999999999


Q ss_pred             CCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..+..   +++++.||...|..+.|+| .-.+++|||.||+||||+-
T Consensus       214 yQtk~---CV~TLeGHt~Nvs~v~fhp-~lpiiisgsEDGTvriWhs  256 (794)
T KOG0276|consen  214 YQTKS---CVQTLEGHTNNVSFVFFHP-ELPIIISGSEDGTVRIWNS  256 (794)
T ss_pred             cchHH---HHHHhhcccccceEEEecC-CCcEEEEecCCccEEEecC
Confidence            98776   8999999999999999999 6668999999999999973

>KOG0315|consensus

Probab=100.00  E-value=5.2e-33  Score=212.17  Aligned_cols=245  Identities=20%  Similarity=0.293  Sum_probs=202.5

Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCC
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKD  170 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~  170 (391)
                      -..+++.+.....+.....+.+|+..|+++.|.  |+++++|+.||+++|||+......+...|..+|+++..   +|+.
T Consensus        60 ~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvl---hpnQ  136 (311)
T KOG0315|consen   60 NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVL---HPNQ  136 (311)
T ss_pred             CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEe---cCCc
Confidence            445677777665554456777899999999997  88999999999999999988777788889999999999   5567


Q ss_pred             eEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCc
Q psy2107         171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGT  250 (391)
Q Consensus       171 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~  250 (391)
                      ..|++|..+|.|++||+....  ... ........+|.++...|+|.+++.+...|+.++|++-+....           
T Consensus       137 teLis~dqsg~irvWDl~~~~--c~~-~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~-----------  202 (311)
T KOG0315|consen  137 TELISGDQSGNIRVWDLGENS--CTH-ELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTA-----------  202 (311)
T ss_pred             ceEEeecCCCcEEEEEccCCc--ccc-ccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCcc-----------
Confidence            789999999999999976321  111 112234568999999999999999999999999999763321           


Q ss_pred             cccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEEECCCC
Q psy2107         251 TSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVHYSPLS  327 (391)
Q Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~~  327 (391)
                                  ....|+..++.|...+....++|++ +|++++.|.+++||+..+. +....+.++. .++.++||.+|
T Consensus       203 ------------s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg  270 (311)
T KOG0315|consen  203 ------------SELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG  270 (311)
T ss_pred             ------------ccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCc
Confidence                        2356778899999999999999765 5999999999999999987 4455556654 89999999999


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~  369 (391)
                      +||++|+.|+.+++|++..++   .++.+.+|.....|++..
T Consensus       271 ~YlvTassd~~~rlW~~~~~k---~v~qy~gh~K~~vc~~ln  309 (311)
T KOG0315|consen  271 EYLVTASSDHTARLWDLSAGK---EVRQYQGHHKAAVCVALN  309 (311)
T ss_pred             cEEEecCCCCceeecccccCc---eeeecCCcccccEEEEee
Confidence            999999999999999999877   778899999888888764

>KOG0266|consensus

Probab=100.00  E-value=2.4e-33  Score=251.69  Aligned_cols=237  Identities=26%  Similarity=0.449  Sum_probs=205.4

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCC-Cc--eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GE--HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~--~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      |...|+|+.|+  |+.+++++.|+.+++|+.. ..  ....+.+|...|.+++|   ++++.++++++.|+++++||+. 
T Consensus       158 ~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~f---s~d~~~l~s~s~D~tiriwd~~-  233 (456)
T KOG0266|consen  158 ECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAF---SPDGSYLLSGSDDKTLRIWDLK-  233 (456)
T ss_pred             ccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEE---CCCCcEEEEecCCceEEEeecc-
Confidence            47889999998  7799999999999999983 33  45566899999999999   7788899999999999999962 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                        .....++++.+|...|++++|+|+++++++|+.|++|++||+++                             .++..
T Consensus       234 --~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~-----------------------------~~~~~  282 (456)
T KOG0266|consen  234 --DDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT-----------------------------GECVR  282 (456)
T ss_pred             --CCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC-----------------------------CeEEE
Confidence              34578899999999999999999999999999999999999987                             45788


Q ss_pred             eecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCc--eeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         270 TLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGG--MKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      .+.+|...|++++|++ +..|++++.|+.|++||+.++.  +...+..+.   ++++++|+|++.++++++.|+.+++||
T Consensus       283 ~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~  362 (456)
T KOG0266|consen  283 KLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWD  362 (456)
T ss_pred             eeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEE
Confidence            9999999999999995 4568888999999999999999  456655433   579999999999999999999999999


Q ss_pred             CCCCCcceEEEEeccccCcE---EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFSSHKEWV---QSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v---~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++...   ....+.+|...+   .+...++ ++.++++|+.|+.|++||+
T Consensus       363 l~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~i~sg~~d~~v~~~~~  408 (456)
T KOG0266|consen  363 LRSGK---SVGTYTGHSNLVRCIFSPTLST-GGKLIYSGSEDGSVYVWDS  408 (456)
T ss_pred             ccCCc---ceeeecccCCcceeEecccccC-CCCeEEEEeCCceEEEEeC
Confidence            98776   677778887753   3444456 7789999999999999997

>KOG0293|consensus

Probab=100.00  E-value=1.2e-33  Score=230.24  Aligned_cols=285  Identities=19%  Similarity=0.370  Sum_probs=223.3

Q ss_pred             HHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCC-CCCCcccCCCCcEEEEEecCC--
Q psy2107          51 NEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPT-PSPLDCILHDDWVSAIDFHND--  127 (391)
Q Consensus        51 ~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~~~--  127 (391)
                      .+.+..+.+|.+-    ..|+.||+.|++          .+.+.+.-+|....... ....++.+|..+|..+.|+++  
T Consensus       217 ~qil~~htdEVWf----l~FS~nGkyLAs----------aSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdr  282 (519)
T KOG0293|consen  217 WQILQDHTDEVWF----LQFSHNGKYLAS----------ASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDR  282 (519)
T ss_pred             hhhHhhCCCcEEE----EEEcCCCeeEee----------ccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCC
Confidence            3455555555432    489999999987          56777777776654433 224678899999999999944  


Q ss_pred             EEEEEECCCeEEEEcCC-CceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-C
Q psy2107         128 WILTGCYDHSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-E  204 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~  204 (391)
                      +|++++.|..+.+||+. +.....+. +|...+.+++|   .|++..+++|+.|+++..||++  .+.   ....++- .
T Consensus       283 yLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W---~pDg~~~V~Gs~dr~i~~wdlD--gn~---~~~W~gvr~  354 (519)
T KOG0293|consen  283 YLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAW---CPDGFRFVTGSPDRTIIMWDLD--GNI---LGNWEGVRD  354 (519)
T ss_pred             eEEecCchHheeeccCCcchhhhhcccCcCCCcceeEE---ccCCceeEecCCCCcEEEecCC--cch---hhccccccc
Confidence            99999999999999995 44444433 34588999999   5678889999999999999965  221   2222221 2


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      ..|.+++..+||+++++.+.|..|++++.++...                             .. +.....+|++++.+
T Consensus       355 ~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~d-----------------------------r~-lise~~~its~~iS  404 (519)
T KOG0293|consen  355 PKVHDLAITYDGKYVLLVTVDKKIRLYNREARVD-----------------------------RG-LISEEQPITSFSIS  404 (519)
T ss_pred             ceeEEEEEcCCCcEEEEEecccceeeechhhhhh-----------------------------hc-cccccCceeEEEEc
Confidence            4689999999999999999999999999876221                             11 22345789999999


Q ss_pred             cCCe-EEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         285 AVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       285 ~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      .++. +++.-.+..+++||++....++.+.++.   -+..-+|.- +..++++|+.|+.|+||+..+++   ++..+.||
T Consensus       405 ~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgk---ll~~LsGH  481 (519)
T KOG0293|consen  405 KDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGK---LLAVLSGH  481 (519)
T ss_pred             CCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCc---eeEeecCC
Confidence            6555 5666789999999999888888888775   344555654 34799999999999999988877   89999999


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ...|++++|+|.+..++||+|+||+||||-.
T Consensus       482 s~~vNcVswNP~~p~m~ASasDDgtIRIWg~  512 (519)
T KOG0293|consen  482 SKTVNCVSWNPADPEMFASASDDGTIRIWGP  512 (519)
T ss_pred             cceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence            9999999999999999999999999999964

>KOG0319|consensus

Probab=100.00  E-value=2.9e-33  Score=243.58  Aligned_cols=256  Identities=23%  Similarity=0.348  Sum_probs=219.8

Q ss_pred             CCcccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+.|..+.|.+++|-|   +.++.++..+.+++|+..+.....+.+|...|.++..   ..+|.+|++|+.|.++++|
T Consensus       316 ~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~---~~~g~llat~sKD~svilW  392 (775)
T KOG0319|consen  316 VKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDV---WSSGDLLATGSKDKSVILW  392 (775)
T ss_pred             ehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeee---cccCcEEEEecCCceEEEE
Confidence            356678899999999986   6999999999999999988777789999999999994   3467899999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      .++.......++....+|...|.+++++..+ .+|+++|.|+++++|++...+....+                    ..
T Consensus       393 r~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~--------------------~~  452 (775)
T KOG0319|consen  393 RLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFP--------------------IV  452 (775)
T ss_pred             EecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCccccccc--------------------ce
Confidence            9855555666778888999999999997754 68999999999999999763321100                    00


Q ss_pred             CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                      .....+...|...|++++++|++ .+++||.|.+.+||++.......++.+|. .++|+.|+|..+.++++|.|++|+||
T Consensus       453 ~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW  532 (775)
T KOG0319|consen  453 LTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIW  532 (775)
T ss_pred             ehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEE
Confidence            11222445799999999999654 58899999999999999999999999987 89999999999999999999999999


Q ss_pred             cCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         343 DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       343 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+.+..   ++.++.||...|..+.|-. ++..|+||+.||.+++|+++
T Consensus       533 ~is~fS---ClkT~eGH~~aVlra~F~~-~~~qliS~~adGliKlWnik  577 (775)
T KOG0319|consen  533 SISTFS---CLKTFEGHTSAVLRASFIR-NGKQLISAGADGLIKLWNIK  577 (775)
T ss_pred             Eeccce---eeeeecCccceeEeeeeee-CCcEEEeccCCCcEEEEecc
Confidence            998877   9999999999999999998 66789999999999999985

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=1.4e-31  Score=228.96  Aligned_cols=272  Identities=27%  Similarity=0.448  Sum_probs=225.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++++.+..          ...++.+.+|......  .......|...+.++.|.  ++.+++++.||.|++|++
T Consensus        13 ~~~~~~~~~~~l~~----------~~~~g~i~i~~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200          13 TCVAFSPDGKLLAT----------GSGDGTIKVWDLETGE--LLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             EEEEEcCCCCEEEE----------eecCcEEEEEEeeCCC--cEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEc
Confidence            45688888777654          2347788888775433  234455788899999998  459999999999999999


Q ss_pred             CC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         144 RG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       144 ~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                      .. .....+..|...+.++.|   .+++.++++++.||.+.+||++    .......+..|...+.+++|+|++.+++++
T Consensus        81 ~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~  153 (289)
T cd00200          81 ETGECVRTLTGHTSYVSSVAF---SPDGRILSSSSRDKTIKVWDVE----TGKCLTTLRGHTDWVNSVAFSPDGTFVASS  153 (289)
T ss_pred             CcccceEEEeccCCcEEEEEE---cCCCCEEEEecCCCeEEEEECC----CcEEEEEeccCCCcEEEEEEcCcCCEEEEE
Confidence            54 667777889999999999   5557788888889999999965    345666777899999999999999988888


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEE
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIW  301 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iw  301 (391)
                      +.||.|++||++++                             +....+..|...+.++.|++++ .+++++.|+.+++|
T Consensus       154 ~~~~~i~i~d~~~~-----------------------------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~  204 (289)
T cd00200         154 SQDGTIKLWDLRTG-----------------------------KCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLW  204 (289)
T ss_pred             cCCCcEEEEEcccc-----------------------------ccceeEecCccccceEEECCCcCEEEEecCCCcEEEE
Confidence            88999999999752                             3455666888899999999766 68888889999999


Q ss_pred             ecccCceeEEEEC-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107         302 DAELGGMKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       302 d~~~~~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                      |++.++....+.. ...+.+++|+|++.++++++.+|.|++||+....   ....+..|...|.+++|+| ++.+|++++
T Consensus       205 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~---~~~~~~~~~~~i~~~~~~~-~~~~l~~~~  280 (289)
T cd00200         205 DLSTGKCLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVWDLRTGE---CVQTLSGHTNSVTSLAWSP-DGKRLASGS  280 (289)
T ss_pred             ECCCCceecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEEEcCCce---eEEEccccCCcEEEEEECC-CCCEEEEec
Confidence            9999888888844 4489999999998899988889999999988655   6667778999999999999 567899999


Q ss_pred             CCCcEEEEe
Q psy2107         381 FDNSVKLWD  389 (391)
Q Consensus       381 ~dg~v~iwd  389 (391)
                      .||.|++|+
T Consensus       281 ~d~~i~iw~  289 (289)
T cd00200         281 ADGTIRIWD  289 (289)
T ss_pred             CCCeEEecC
Confidence            999999996

>KOG0278|consensus

Probab=100.00  E-value=1.6e-34  Score=220.53  Aligned_cols=243  Identities=24%  Similarity=0.405  Sum_probs=198.4

Q ss_pred             CCCcccCCCCcEEEEEec-----CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         108 SPLDCILHDDWVSAIDFH-----NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       108 ~~~~~~~h~~~V~~~~~~-----~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      .|+.|.+|+.+|-.++|+     |-+|++++.||.-.+-+- ++.-+.++.+|.++|+....   +.+....++++.|-+
T Consensus         6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l---~~na~~aasaaadft   82 (334)
T KOG0278|consen    6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATL---NKNATRAASAAADFT   82 (334)
T ss_pred             CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeec---Cchhhhhhhhcccch
Confidence            378899999999999998     448999999999888776 67889999999999999998   667778899999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      .++||.-    ....++.+. |..-|.+++|+.+.++|++|+.+..+++||++..+                        
T Consensus        83 akvw~a~----tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~------------------------  133 (334)
T KOG0278|consen   83 AKVWDAV----TGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK------------------------  133 (334)
T ss_pred             hhhhhhh----hhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCC------------------------
Confidence            9999943    334556654 88899999999999999999999999999997533                        


Q ss_pred             CCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE----------
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV----------  330 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l----------  330 (391)
                          .+...+.+|.+.|..+.|. .+..+++++.|++||+||.+++..++++..+.++.++.++++|++|          
T Consensus       134 ----App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~F  209 (334)
T KOG0278|consen  134 ----APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKF  209 (334)
T ss_pred             ----CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEE
Confidence                3666788999999999999 6677899999999999999999999988877666666666665544          


Q ss_pred             ------------------------------EEeeCCCcEEEEcCCCCCcceEEEE-eccccCcEEEEEECCCCCCEEEEe
Q psy2107         331 ------------------------------ITASADKQIRLYDPKVKEGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       331 ------------------------------~~g~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                                                    ++|+.|..++.||..++.   -+.. ..+|.++|.|+.|+| ++.+.++|
T Consensus       210 wdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~Tge---Ei~~~nkgh~gpVhcVrFSP-dGE~yAsG  285 (334)
T KOG0278|consen  210 WDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGE---EIGSYNKGHFGPVHCVRFSP-DGELYASG  285 (334)
T ss_pred             eccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCc---eeeecccCCCCceEEEEECC-CCceeecc
Confidence                                          444444444444444433   2223 378999999999999 66689999


Q ss_pred             eCCCcEEEEec
Q psy2107         380 SFDNSVKLWDL  390 (391)
Q Consensus       380 ~~dg~v~iwdl  390 (391)
                      |.||+|++|..
T Consensus       286 SEDGTirlWQt  296 (334)
T KOG0278|consen  286 SEDGTIRLWQT  296 (334)
T ss_pred             CCCceEEEEEe
Confidence            99999999975

>KOG0291|consensus

Probab=100.00  E-value=6.6e-32  Score=235.70  Aligned_cols=260  Identities=22%  Similarity=0.343  Sum_probs=212.1

Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCC
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGK  169 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~  169 (391)
                      -+.+-+|..+...  -.+...+|...++|++++  |.++|||+.||.|+|||. .+.+..++..|+..|+.+.|   +..
T Consensus       329 lgQLlVweWqsEs--YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f---~~~  403 (893)
T KOG0291|consen  329 LGQLLVWEWQSES--YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQF---TAR  403 (893)
T ss_pred             cceEEEEEeeccc--eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEE---Eec
Confidence            3456666554322  245666899999999999  559999999999999999 67888999999999999999   667


Q ss_pred             CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCCCCCCCCCCCC
Q psy2107         170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTVSESRQQFATGGWDC-LLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      ++.+++.+-||+|+.||+.    ..+..+++... .-...|++..|.|.++.+|+.|. .|.+|++.+++          
T Consensus       404 g~~llssSLDGtVRAwDlk----RYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGq----------  469 (893)
T KOG0291|consen  404 GNVLLSSSLDGTVRAWDLK----RYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQ----------  469 (893)
T ss_pred             CCEEEEeecCCeEEeeeec----ccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCe----------
Confidence            8999999999999999975    45556666543 23578999999999998888874 59999998855          


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECC
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSP  325 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p  325 (391)
                                         .+-.+.+|.++|.+++|++. ..|+++|.|.+||+||+-.. ....++...+.+..++|.|
T Consensus       470 -------------------llDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrP  530 (893)
T KOG0291|consen  470 -------------------LLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRP  530 (893)
T ss_pred             -------------------eeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcC
Confidence                               57789999999999999965 45999999999999998654 4667888888999999999


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcc-----------------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGA-----------------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~-----------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      +|+-|++++.||.|.+||.......                 .....-.......+.+++++ ++.++++||....|++|
T Consensus       531 dG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySa-DG~~IlAgG~sn~iCiY  609 (893)
T KOG0291|consen  531 DGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSA-DGKCILAGGESNSICIY  609 (893)
T ss_pred             CCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcC-CCCEEEecCCcccEEEE
Confidence            9999999999999999998643211                 01111122346799999999 66789999999999999


Q ss_pred             ecC
Q psy2107         389 DLR  391 (391)
Q Consensus       389 dlr  391 (391)
                      |++
T Consensus       610 ~v~  612 (893)
T KOG0291|consen  610 DVP  612 (893)
T ss_pred             ECc
Confidence            975

>KOG0318|consensus

Probab=100.00  E-value=7.8e-32  Score=226.13  Aligned_cols=277  Identities=19%  Similarity=0.351  Sum_probs=205.2

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      ......|...|.|+.|+  |.++++.+.||.+.+||- +++++..+.   +|.+.|.+++|   +||+..+++++.|.++
T Consensus       183 k~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsW---sPDs~~~~T~SaDkt~  259 (603)
T KOG0318|consen  183 KSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSW---SPDSTQFLTVSADKTI  259 (603)
T ss_pred             eecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEE---CCCCceEEEecCCceE
Confidence            34556699999999998  669999999999999997 778887777   89999999999   7788999999999999


Q ss_pred             EEEeecCCC---------------------------------------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         183 MIWEWKVES---------------------------------------NSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       183 ~iwd~~~~~---------------------------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      +|||+....                                       .....+..+.+|...|+++..+|++++|++|+
T Consensus       260 KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~Sgs  339 (603)
T KOG0318|consen  260 KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGS  339 (603)
T ss_pred             EEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeec
Confidence            999965221                                       11123455678999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCC--CCCCCCc-ccccccc---cccc----------CCCCCce-ee----------------
Q psy2107         224 WDCLLKIWSADISKERGDPS--ENGDEGT-TSKKRKK---EYSS----------ASSRTPL-IT----------------  270 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~--~~~~~~~-~~~~~~~---~~~~----------~~~~~~~-~~----------------  270 (391)
                      .||.|.-|+..++.......  ....... .......   ..++          ..-.+.. ..                
T Consensus       340 yDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~  419 (603)
T KOG0318|consen  340 YDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGT  419 (603)
T ss_pred             cCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCE
Confidence            99999999998766543210  0000000 0000000   0011          1100000 00                


Q ss_pred             -----------ecCc--------cCcccEEEeccCC-eEEEEECCCeEEEEecccCcee---EEEECCeeeEEEEECCCC
Q psy2107         271 -----------LKGH--------KEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMK---SEIVGNKSFFDVHYSPLS  327 (391)
Q Consensus       271 -----------~~~~--------~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~i~~~~~~p~~  327 (391)
                                 +..+        .-...+++++|++ .++.|+.|+.|++|.+..+...   ....+..++++++++|++
T Consensus       420 avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~  499 (603)
T KOG0318|consen  420 AVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDG  499 (603)
T ss_pred             EEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCC
Confidence                       0101        0123577778554 5889999999999999875533   345566799999999999


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .|||+|...+.+.+||+.+.+.  ....+.-|...|++++|+| +..++|||+.|-.|.||++.
T Consensus       500 ~yla~~Da~rkvv~yd~~s~~~--~~~~w~FHtakI~~~aWsP-~n~~vATGSlDt~Viiysv~  560 (603)
T KOG0318|consen  500 AYLAAGDASRKVVLYDVASREV--KTNRWAFHTAKINCVAWSP-NNKLVATGSLDTNVIIYSVK  560 (603)
T ss_pred             cEEEEeccCCcEEEEEcccCce--ecceeeeeeeeEEEEEeCC-CceEEEeccccceEEEEEcc
Confidence            9999999999999999987653  2334555999999999999 66799999999999999873

>KOG0276|consensus

Probab=100.00  E-value=7e-33  Score=236.95  Aligned_cols=271  Identities=21%  Similarity=0.367  Sum_probs=223.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.|..-.+..++          -.+.+.+|..+.+..-...  .-..-+|.+..|-  .+++++|+.|..|+||+.
T Consensus        17 KsVd~HPtePw~la~L----------ynG~V~IWnyetqtmVksf--eV~~~PvRa~kfiaRknWiv~GsDD~~IrVfny   84 (794)
T KOG0276|consen   17 KSVDFHPTEPWILAAL----------YNGDVQIWNYETQTMVKSF--EVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNY   84 (794)
T ss_pred             eeeecCCCCceEEEee----------ecCeeEEEecccceeeeee--eecccchhhheeeeccceEEEecCCceEEEEec
Confidence            4567777663332222          2456677766544332111  1134577788886  569999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFAT  221 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s  221 (391)
                       +.+++..+..|..-|++++.+   |...++++++.|-+|++||++   +.+.+.+++.+|..-|.+++|+| |.+.+++
T Consensus        85 nt~ekV~~FeAH~DyIR~iavH---Pt~P~vLtsSDDm~iKlW~we---~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS  158 (794)
T KOG0276|consen   85 NTGEKVKTFEAHSDYIRSIAVH---PTLPYVLTSSDDMTIKLWDWE---NEWACEQTFEGHEHYVMQVAFNPKDPNTFAS  158 (794)
T ss_pred             ccceeeEEeeccccceeeeeec---CCCCeEEecCCccEEEEeecc---CceeeeeEEcCcceEEEEEEecCCCccceee
Confidence             788999999999999999995   456689999999999999986   57889999999999999999999 5678999


Q ss_pred             EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC---eEEEEECCCeE
Q psy2107         222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD---EIITSSWDHTL  298 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i  298 (391)
                      ++-|++|++|.+..                             ..+..++.+|...|.|+.|-+.+   +|++|+.|.++
T Consensus       159 ~sLDrTVKVWslgs-----------------------------~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~ti  209 (794)
T KOG0276|consen  159 ASLDRTVKVWSLGS-----------------------------PHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTI  209 (794)
T ss_pred             eeccccEEEEEcCC-----------------------------CCCceeeeccccCcceEEeccCCCcceEEecCCCceE
Confidence            99999999999965                             45788999999999999999766   79999999999


Q ss_pred             EEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         299 KIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      +|||..+..+++++.+|. .|..+.|+|.-..+++|+.||+++||+..+-+   +...+.-.-..|++++-.+ +...++
T Consensus       210 KvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~---lE~tLn~gleRvW~I~~~k-~~~~i~  285 (794)
T KOG0276|consen  210 KVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYK---LEKTLNYGLERVWCIAAHK-GDGKIA  285 (794)
T ss_pred             EEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCccee---hhhhhhcCCceEEEEeecC-CCCeEE
Confidence            999999999999999887 89999999999999999999999999976654   4445555567899999988 555688


Q ss_pred             EeeCCCcEEE
Q psy2107         378 SASFDNSVKL  387 (391)
Q Consensus       378 s~~~dg~v~i  387 (391)
                      .|.+.|.|.+
T Consensus       286 vG~Deg~i~v  295 (794)
T KOG0276|consen  286 VGFDEGSVTV  295 (794)
T ss_pred             EeccCCcEEE
Confidence            8888877654

>KOG0305|consensus

Probab=100.00  E-value=1.2e-32  Score=237.47  Aligned_cols=235  Identities=21%  Similarity=0.422  Sum_probs=207.2

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      +.+.|+++.|+  |.+|++|..+|.|.|||. +.+.+..+.+ |...|-+++|     ++..+.+|+.|+.|..+|++..
T Consensus       216 ~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW-----~~~~lssGsr~~~I~~~dvR~~  290 (484)
T KOG0305|consen  216 GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAW-----NSSVLSSGSRDGKILNHDVRIS  290 (484)
T ss_pred             CCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEec-----cCceEEEecCCCcEEEEEEecc
Confidence            37899999998  889999999999999999 5666677777 9999999999     4678999999999999998855


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      .....   .+.+|...|..++|+++++++|+|+.|+.+.|||...                             ..+...
T Consensus       291 ~~~~~---~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~-----------------------------~~p~~~  338 (484)
T KOG0305|consen  291 QHVVS---TLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLS-----------------------------PEPKFT  338 (484)
T ss_pred             hhhhh---hhhcccceeeeeEECCCCCeeccCCCccceEeccCCC-----------------------------ccccEE
Confidence            43322   4788999999999999999999999999999999944                             457888


Q ss_pred             ecCccCcccEEEecc--CCeEEEE--ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEE--eeCCCcEEEEcC
Q psy2107         271 LKGHKEAISAVQWTA--VDEIITS--SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT--ASADKQIRLYDP  344 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~--~~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~--g~~dg~i~iwd~  344 (391)
                      +..|...|.+++|+|  .+.|++|  +.|+.|++||..+++.+..+.....|..+.|++..+-|++  |..++.|.||+.
T Consensus       339 ~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdtgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~  418 (484)
T KOG0305|consen  339 FTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDTGSQVCSLIWSKKYKELLSTHGYSENQITLWKY  418 (484)
T ss_pred             EeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccccCCceeeEEEcCCCCEEEEecCCCCCcEEEEec
Confidence            999999999999996  4568887  4699999999999999999999999999999999876665  456789999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+.+   .+..+.+|...|..++++| ++..+++|+.|.++++|++
T Consensus       419 ps~~---~~~~l~gH~~RVl~la~SP-dg~~i~t~a~DETlrfw~~  460 (484)
T KOG0305|consen  419 PSMK---LVAELLGHTSRVLYLALSP-DGETIVTGAADETLRFWNL  460 (484)
T ss_pred             cccc---eeeeecCCcceeEEEEECC-CCCEEEEecccCcEEeccc
Confidence            8766   7889999999999999999 5678999999999999986

>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto

Probab=100.00  E-value=3.5e-31  Score=226.44  Aligned_cols=241  Identities=29%  Similarity=0.520  Sum_probs=204.5

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      .+.+|.++|++++|+  ++++++++.||.+++|+.. +.....+..|...+..+.|   .+++.++++++.||.|++|++
T Consensus         4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~~~~i~i~~~   80 (289)
T cd00200           4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAA---SADGTYLASGSSDKTIRLWDL   80 (289)
T ss_pred             HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEE---CCCCCEEEEEcCCCeEEEEEc
Confidence            345799999999998  4799999999999999994 4566677889999999999   556789999999999999996


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      ..    ...+..+..|...+.++.|+++++++++++.||.|.+||+++                             ...
T Consensus        81 ~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----------------------------~~~  127 (289)
T cd00200          81 ET----GECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVET-----------------------------GKC  127 (289)
T ss_pred             Cc----ccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCC-----------------------------cEE
Confidence            52    245666778888999999999988888888899999999975                             234


Q ss_pred             eeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         268 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ...+..|...+.++.|++++. +++++.|+.|++||+++++....+..+. .+.+++|+|+++.+++++.++.|++||++
T Consensus       128 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~  207 (289)
T cd00200         128 LTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS  207 (289)
T ss_pred             EEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECC
Confidence            556668888999999998655 5555559999999999888888887766 89999999999999999999999999998


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...   ....+..|...+.+++|+| ++.++++++.||.|++||++
T Consensus       208 ~~~---~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~i~~~~  249 (289)
T cd00200         208 TGK---CLGTLRGHENGVNSVAFSP-DGYLLASGSEDGTIRVWDLR  249 (289)
T ss_pred             CCc---eecchhhcCCceEEEEEcC-CCcEEEEEcCCCcEEEEEcC
Confidence            755   6666768899999999999 57788888889999999974

>KOG0292|consensus

Probab=100.00  E-value=1e-32  Score=244.67  Aligned_cols=239  Identities=26%  Similarity=0.477  Sum_probs=208.0

Q ss_pred             CCCcEEEEEecCC--EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~~~--~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      .+.+|..++|++.  +++++-..|.|++||.. +..+..+..|.++|..+.|   ++.+.++++|+.|-.|++|++.   
T Consensus         8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~F---H~~qplFVSGGDDykIkVWnYk---   81 (1202)
T KOG0292|consen    8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDF---HPTQPLFVSGGDDYKIKVWNYK---   81 (1202)
T ss_pred             ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeee---cCCCCeEEecCCccEEEEEecc---
Confidence            4568889999955  99999999999999995 5667789999999999999   6678899999999999999975   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       ..+++.++.+|-+.|..+.|++.-.+|+++|.|.+|+||+..+                             ++++..+
T Consensus        82 -~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqs-----------------------------r~~iavl  131 (1202)
T KOG0292|consen   82 -TRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQS-----------------------------RKCIAVL  131 (1202)
T ss_pred             -cceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccC-----------------------------CceEEEE
Confidence             5588999999999999999999999999999999999999976                             6789999


Q ss_pred             cCccCcccEEEecc-CCeEEEEECCCeEEEEecccCc-----------------------------eeEEEECCe-eeEE
Q psy2107         272 KGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGG-----------------------------MKSEIVGNK-SFFD  320 (391)
Q Consensus       272 ~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~-----------------------------~~~~~~~~~-~i~~  320 (391)
                      .+|...|.|..|+| ...++++|-|.+||+||+.--+                             ....+.+|. .|+-
T Consensus       132 tGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNw  211 (1202)
T KOG0292|consen  132 TGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNW  211 (1202)
T ss_pred             ecCceEEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccce
Confidence            99999999999997 6779999999999999984210                             112233444 7889


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++|+|.-.++++|++|..|++|.+...+.. .+-+..+|.+.|.++-|+| ...+++|.|.|++|+|||+.
T Consensus       212 aAfhpTlpliVSG~DDRqVKlWrmnetKaW-EvDtcrgH~nnVssvlfhp-~q~lIlSnsEDksirVwDm~  280 (1202)
T KOG0292|consen  212 AAFHPTLPLIVSGADDRQVKLWRMNETKAW-EVDTCRGHYNNVSSVLFHP-HQDLILSNSEDKSIRVWDMT  280 (1202)
T ss_pred             EEecCCcceEEecCCcceeeEEEeccccce-eehhhhcccCCcceEEecC-ccceeEecCCCccEEEEecc
Confidence            999999999999999999999998654322 3457789999999999999 77899999999999999973

>KOG0643|consensus

Probab=100.00  E-value=5.5e-32  Score=208.67  Aligned_cols=249  Identities=21%  Similarity=0.257  Sum_probs=205.7

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      |+.+.||..+++.+.|+  |++|++++.|.+..||-. +++.+.++.+|.+.|+|+..   +.+...+++|+.|.++++|
T Consensus         3 pi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Di---d~~s~~liTGSAD~t~kLW   79 (327)
T KOG0643|consen    3 PILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDI---DWDSKHLITGSADQTAKLW   79 (327)
T ss_pred             ccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEe---cCCcceeeeccccceeEEE
Confidence            56678999999999998  999999999999999976 99999999999999999999   7788899999999999999


Q ss_pred             eecCCCC-------------------------------------------------ceeEEEEEecCCCCeEEEEEcCCC
Q psy2107         186 EWKVESN-------------------------------------------------SIECIHVCRGHERGLETVTVSESR  216 (391)
Q Consensus       186 d~~~~~~-------------------------------------------------~~~~~~~~~~~~~~v~~l~~~~~~  216 (391)
                      |+.....                                                 ..++...+..+.+.++.+-|.|-+
T Consensus        80 Dv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~  159 (327)
T KOG0643|consen   80 DVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLG  159 (327)
T ss_pred             EcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccC
Confidence            9652210                                                 112334445566788999999999


Q ss_pred             CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECC
Q psy2107         217 QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWD  295 (391)
Q Consensus       217 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d  295 (391)
                      +.|++|..||.|..||++++.+                            .+.....|...|+.++++++ .++++++.|
T Consensus       160 ~~ii~Ghe~G~is~~da~~g~~----------------------------~v~s~~~h~~~Ind~q~s~d~T~FiT~s~D  211 (327)
T KOG0643|consen  160 ETIIAGHEDGSISIYDARTGKE----------------------------LVDSDEEHSSKINDLQFSRDRTYFITGSKD  211 (327)
T ss_pred             CEEEEecCCCcEEEEEcccCce----------------------------eeechhhhccccccccccCCcceEEecccC
Confidence            9999999999999999988654                            44455678899999999954 569999999


Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------ceEEEEeccccCcEE
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----------AIVKSTFSSHKEWVQ  364 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~  364 (391)
                      .+-++||..+-.+++++....|+++.+++|....++.|+.....-|=-.....+           ...+..+.+|-++|+
T Consensus       212 ttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPIN  291 (327)
T KOG0643|consen  212 TTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPIN  291 (327)
T ss_pred             ccceeeeccceeeEEEeeecccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcc
Confidence            999999999999999999999999999999988887776543333322222111           113456789999999


Q ss_pred             EEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         365 SVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       365 ~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +++|+| ++...+||+.||.|++.-
T Consensus       292 svAfhP-dGksYsSGGEDG~VR~h~  315 (327)
T KOG0643|consen  292 SVAFHP-DGKSYSSGGEDGYVRLHH  315 (327)
T ss_pred             eeEECC-CCcccccCCCCceEEEEE
Confidence            999999 667799999999999864

>KOG0274|consensus

Probab=100.00  E-value=1.4e-31  Score=239.55  Aligned_cols=252  Identities=24%  Similarity=0.424  Sum_probs=215.2

Q ss_pred             CccceEEEEEEeccCCCCCCc-ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEec
Q psy2107          91 SSENVIDVEYLESTPTPSPLD-CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~-~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~  166 (391)
                      +.+..+.+|.....  ..... +.||.+.|.++++.  ++.+++|+.|.++++||. ++.+...+.+|...|.++..   
T Consensus       225 s~~~tl~~~~~~~~--~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~---  299 (537)
T KOG0274|consen  225 SDDSTLHLWDLNNG--YLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI---  299 (537)
T ss_pred             CCCceeEEeecccc--eEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc---
Confidence            34555555544221  12333 77999999999998  889999999999999999 78888899999999999987   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                        ...++++|+.|.+|++|++.    +..++..+.+|..+|.++..+  +.++++|+.||.|++||+.+           
T Consensus       300 --~~~~~~sgs~D~tVkVW~v~----n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~-----------  360 (537)
T KOG0274|consen  300 --DPFLLVSGSRDNTVKVWDVT----NGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRT-----------  360 (537)
T ss_pred             --cCceEeeccCCceEEEEecc----CcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhh-----------
Confidence              44578889999999999975    557888888899999999998  77999999999999999976           


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECC
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSP  325 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p  325 (391)
                                        .+++..+.+|...|.++.+.+...+++|+.|++|++||+++. +++.++.+|..+. -.+..
T Consensus       361 ------------------~~cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v-~~l~~  421 (537)
T KOG0274|consen  361 ------------------GKCLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLV-SSLLL  421 (537)
T ss_pred             ------------------ceeeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchhhhhhhhcCCcccc-ccccc
Confidence                              568899999999999998886688999999999999999999 9999999988554 33344


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+++|++++.|+.|++||...++   +...+.+ |...|..+++.   ...+++++.||++++||+|
T Consensus       422 ~~~~Lvs~~aD~~Ik~WD~~~~~---~~~~~~~~~~~~v~~l~~~---~~~il~s~~~~~~~l~dl~  482 (537)
T KOG0274|consen  422 RDNFLVSSSADGTIKLWDAEEGE---CLRTLEGRHVGGVSALALG---KEEILCSSDDGSVKLWDLR  482 (537)
T ss_pred             ccceeEeccccccEEEeecccCc---eeeeeccCCcccEEEeecC---cceEEEEecCCeeEEEecc
Confidence            58899999999999999998877   7778887 67889999885   3468999999999999986

>KOG0645|consensus

Probab=100.00  E-value=9.3e-31  Score=202.30  Aligned_cols=213  Identities=25%  Similarity=0.424  Sum_probs=182.1

Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      .+..+.+|.+.+..++|+|.  .|..||+|+.|..|++|+... .....+...+ .+|+..|.+++|+|.|++|++|+.|
T Consensus         6 ~~~~~~gh~~r~W~~awhp~--~g~ilAscg~Dk~vriw~~~~-~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD   82 (312)
T KOG0645|consen    6 LEQKLSGHKDRVWSVAWHPG--KGVILASCGTDKAVRIWSTSS-GDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFD   82 (312)
T ss_pred             eEEeecCCCCcEEEEEeccC--CceEEEeecCCceEEEEecCC-CCcEEEEEeccccchheeeeeeecCCCcEEEEeecc
Confidence            34577899999999999553  277999999999999999542 3446666555 3799999999999999999999999


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecc
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~  304 (391)
                      .++.||.-..+                           ..+++.++.+|...|.|++|+ ++++|++++.|..|-||.+.
T Consensus        83 ~t~~Iw~k~~~---------------------------efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~d  135 (312)
T KOG0645|consen   83 ATVVIWKKEDG---------------------------EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEID  135 (312)
T ss_pred             ceEEEeecCCC---------------------------ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEec
Confidence            99999987542                           256889999999999999999 55679999999999999987


Q ss_pred             cC---ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107         305 LG---GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       305 ~~---~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                      .+   .+...++.|. .|..+.|+|...+|++++.|++|++|+-.......+.+.+.+|...|.+++|++ .+..|++++
T Consensus       136 eddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~-~G~rl~s~s  214 (312)
T KOG0645|consen  136 EDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN-IGSRLVSCS  214 (312)
T ss_pred             CCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecC-CCceEEEec
Confidence            54   3556666665 899999999999999999999999998775556778899999999999999999 556799999


Q ss_pred             CCCcEEEEec
Q psy2107         381 FDNSVKLWDL  390 (391)
Q Consensus       381 ~dg~v~iwdl  390 (391)
                      .|++|+||.+
T Consensus       215 dD~tv~Iw~~  224 (312)
T KOG0645|consen  215 DDGTVSIWRL  224 (312)
T ss_pred             CCcceEeeee
Confidence            9999999974

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=1.3e-30  Score=251.03  Aligned_cols=240  Identities=18%  Similarity=0.278  Sum_probs=194.9

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ  180 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg  180 (391)
                      +..|.+.|++++|+  ++++|+|+.||.|+||+....         ....+ .+...+.+++|.|.  .+.+|++++.||
T Consensus       479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~--~~~~las~~~Dg  555 (793)
T PLN00181        479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVEL-ASRSKLSGICWNSY--IKSQVASSNFEG  555 (793)
T ss_pred             ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEe-cccCceeeEEeccC--CCCEEEEEeCCC
Confidence            45699999999998  679999999999999997421         11222 24567999999653  467899999999


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      +|++||+.    ....+..+.+|.+.|.+++|+| ++.+|++|+.||.|++||++++.                      
T Consensus       556 ~v~lWd~~----~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~----------------------  609 (793)
T PLN00181        556 VVQVWDVA----RSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV----------------------  609 (793)
T ss_pred             eEEEEECC----CCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc----------------------
Confidence            99999964    3456778889999999999997 78899999999999999997632                      


Q ss_pred             ccCCCCCceeeecCccCcccEEEec-c-CCeEEEEECCCeEEEEecccCc-eeEEEECCe-eeEEEEECCCCCEEEEeeC
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWT-A-VDEIITSSWDHTLKIWDAELGG-MKSEIVGNK-SFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~-~i~~~~~~p~~~~l~~g~~  335 (391)
                             .+..+..+ ..+.++.|+ + +..+++|+.||.|++||+++.. ....+..|. .|.++.|. ++.+|++++.
T Consensus       610 -------~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~  680 (793)
T PLN00181        610 -------SIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSST  680 (793)
T ss_pred             -------EEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEEC
Confidence                   34455443 578899996 3 4569999999999999998765 455666554 89999997 6889999999


Q ss_pred             CCcEEEEcCCCCC---cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         336 DKQIRLYDPKVKE---GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       336 dg~i~iwd~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+.|++||++...   ....+..+.+|...++.++|+| ++.+|++|+.||.|++|+.
T Consensus       681 D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~-~~~~lasgs~D~~v~iw~~  737 (793)
T PLN00181        681 DNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV-SDGYIATGSETNEVFVYHK  737 (793)
T ss_pred             CCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcC-CCCEEEEEeCCCEEEEEEC
Confidence            9999999987531   1235678889999999999999 5678999999999999985

>KOG0294|consensus

Probab=100.00  E-value=4.7e-31  Score=208.12  Aligned_cols=242  Identities=18%  Similarity=0.333  Sum_probs=199.1

Q ss_pred             CcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         110 LDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .....|.++|++++.++.++|+|+.|-+|+|||+ +..++..+..|.+.|+++.|.+.. ....|++|+.||.|.+|+. 
T Consensus        37 F~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~-S~shLlS~sdDG~i~iw~~-  114 (362)
T KOG0294|consen   37 FAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPL-SKSHLLSGSDDGHIIIWRV-  114 (362)
T ss_pred             ccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCc-chhheeeecCCCcEEEEEc-
Confidence            4445699999999999999999999999999999 556777888999999999996642 2237999999999999994 


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                         +.+.++..+++|.+.|+.++.+|.+++-++.+.|+.+++||+-.++..                           .+
T Consensus       115 ---~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a---------------------------~v  164 (362)
T KOG0294|consen  115 ---GSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA---------------------------FV  164 (362)
T ss_pred             ---CCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc---------------------------ee
Confidence               478999999999999999999999999999999999999999775531                           12


Q ss_pred             eeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      ..+.   ..-+.+.|+|.+. ++.++ ...|-+|-+.+......+..+..+.|+.|. ++..|++|.+|+.|.+||....
T Consensus       165 ~~L~---~~at~v~w~~~Gd~F~v~~-~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~  239 (362)
T KOG0294|consen  165 LNLK---NKATLVSWSPQGDHFVVSG-RNKIDIYQLDNASVFREIENPKRILCATFL-DGSELLVGGDNEWISLKDTDSD  239 (362)
T ss_pred             eccC---CcceeeEEcCCCCEEEEEe-ccEEEEEecccHhHhhhhhccccceeeeec-CCceEEEecCCceEEEeccCCC
Confidence            2222   2223489997665 55554 457899999988888877777778888876 4778889999999999998764


Q ss_pred             CcceEEEEeccccCcEEEEEECC-CCCCEEEEeeCCCcEEEEecC
Q psy2107         348 EGAIVKSTFSSHKEWVQSVRWSP-IDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       348 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .   +...+.+|...|.++.+-. ..+.+|+|+|.||.|+|||++
T Consensus       240 ~---~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~  281 (362)
T KOG0294|consen  240 T---PLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDID  281 (362)
T ss_pred             c---cceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcc
Confidence            4   7778899999999998432 256799999999999999985

>KOG0285|consensus

Probab=100.00  E-value=3.8e-31  Score=212.07  Aligned_cols=260  Identities=17%  Similarity=0.285  Sum_probs=215.5

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC--CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEec
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN--DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~  166 (391)
                      .+.++++.||+.....-  .+++.||-..|..++++.  .++++++.|+.|+.||+ ..+.+..+.+|-..|.|++.   
T Consensus       169 gs~DrtikIwDlatg~L--kltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~l---  243 (460)
T KOG0285|consen  169 GSADRTIKIWDLATGQL--KLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDL---  243 (460)
T ss_pred             cCCCceeEEEEcccCeE--EEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEec---
Confidence            46789999999865433  466778999999999994  49999999999999999 56677789999999999999   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                      .|.-+.|++|+.|.++++||++    ....+..+.+|..+|.++.+.|-...+++|+.|++|++||++.++         
T Consensus       244 hPTldvl~t~grDst~RvWDiR----tr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agk---------  310 (460)
T KOG0285|consen  244 HPTLDVLVTGGRDSTIRVWDIR----TRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGK---------  310 (460)
T ss_pred             cccceeEEecCCcceEEEeeec----ccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCc---------
Confidence            5567899999999999999987    445688999999999999999988889999999999999998744         


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECC
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP  325 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p  325 (391)
                                          ...++..|...|.+++.+|...+++.+.-..|+-|++..|..+..+.++. -+.+++...
T Consensus       311 --------------------t~~tlt~hkksvral~lhP~e~~fASas~dnik~w~~p~g~f~~nlsgh~~iintl~~ns  370 (460)
T KOG0285|consen  311 --------------------TMITLTHHKKSVRALCLHPKENLFASASPDNIKQWKLPEGEFLQNLSGHNAIINTLSVNS  370 (460)
T ss_pred             --------------------eeEeeecccceeeEEecCCchhhhhccCCccceeccCCccchhhccccccceeeeeeecc
Confidence                                56788899999999999987665555555579999999999998888777 567788776


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-----cccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFS-----SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      | .++++|+++|.+.+||.+++..........     .....|.+.+|.. .+..|+||..|.+|++|.
T Consensus       371 D-~v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDk-tg~rlit~eadKtIk~~k  437 (460)
T KOG0285|consen  371 D-GVLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDK-TGSRLITGEADKTIKMYK  437 (460)
T ss_pred             C-ceEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecc-cCceEEeccCCcceEEEe
Confidence            5 478889999999999998765332221111     1345789999998 555699999999999995

>KOG0265|consensus

Probab=100.00  E-value=2.5e-31  Score=208.33  Aligned_cols=205  Identities=22%  Similarity=0.396  Sum_probs=182.6

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~  227 (391)
                      +..+.+|.+.|+.+.|   +|++.+|++|+.|..|.+|+..   +..+-...+++|++.|..+.|.++++.+++++.|.+
T Consensus        40 ~m~l~gh~geI~~~~F---~P~gs~~aSgG~Dr~I~LWnv~---gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~  113 (338)
T KOG0265|consen   40 IMLLPGHKGEIYTIKF---HPDGSCFASGGSDRAIVLWNVY---GDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKT  113 (338)
T ss_pred             hhhcCCCcceEEEEEE---CCCCCeEeecCCcceEEEEecc---ccccceeeeccccceeEeeeeccCCCEEEEecCCce
Confidence            3456799999999999   7789999999999999999954   233445667799999999999999999999999999


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEeccc
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~  305 (391)
                      ++.||+++++                             ....+++|..-|..+.-..-  ..+.+++.|+++++||+++
T Consensus       114 v~~wD~~tG~-----------------------------~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~  164 (338)
T KOG0265|consen  114 VRGWDAETGK-----------------------------RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK  164 (338)
T ss_pred             EEEEecccce-----------------------------eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc
Confidence            9999998844                             57778899998888885532  3477889999999999999


Q ss_pred             CceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         306 GGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       306 ~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      ...++++....+++++.|...+..+.+|+-|+.|++||++...   ....+.||..+|+++..+| .+.++.+-+.|.++
T Consensus       165 k~~~~t~~~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d---~~~~lsGh~DtIt~lsls~-~gs~llsnsMd~tv  240 (338)
T KOG0265|consen  165 KEAIKTFENKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKND---GLYTLSGHADTITGLSLSR-YGSFLLSNSMDNTV  240 (338)
T ss_pred             cchhhccccceeEEEEEecccccceeeccccCceeeeccccCc---ceEEeecccCceeeEEecc-CCCccccccccceE
Confidence            9999999999999999999999999999999999999998877   7889999999999999999 66679999999999


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      ++||+|
T Consensus       241 rvwd~r  246 (338)
T KOG0265|consen  241 RVWDVR  246 (338)
T ss_pred             EEEEec
Confidence            999987

>KOG0277|consensus

Probab=100.00  E-value=2.6e-31  Score=203.49  Aligned_cols=221  Identities=23%  Similarity=0.379  Sum_probs=184.0

Q ss_pred             CCCeEEEEcCC-CceEEec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107         134 YDHSVHIWTRR-GEHKLNI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV  210 (391)
Q Consensus       134 ~dg~i~iwd~~-~~~~~~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l  210 (391)
                      ..|++.|.+++ .+-+..+  ..-...+..++|+++  ..+.+++++.||++++||...   ...+++.++.|...|.++
T Consensus        36 G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~--~e~~~~~a~GDGSLrl~d~~~---~s~Pi~~~kEH~~EV~Sv  110 (311)
T KOG0277|consen   36 GNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSEN--HENQVIAASGDGSLRLFDLTM---PSKPIHKFKEHKREVYSV  110 (311)
T ss_pred             cCceEEEEecCCCCCeEEEEeeecccceeEeeecCC--CcceEEEEecCceEEEeccCC---CCcchhHHHhhhhheEEe
Confidence            35889999984 4333322  235678999999765  456889999999999999542   345889999999999999


Q ss_pred             EEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CC
Q psy2107         211 TVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VD  287 (391)
Q Consensus       211 ~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~  287 (391)
                      .|++ +++.+++++.|++|++|+...                             ...+.++.+|...|....|+|  .+
T Consensus       111 dwn~~~r~~~ltsSWD~TiKLW~~~r-----------------------------~~Sv~Tf~gh~~~Iy~a~~sp~~~n  161 (311)
T KOG0277|consen  111 DWNTVRRRIFLTSSWDGTIKLWDPNR-----------------------------PNSVQTFNGHNSCIYQAAFSPHIPN  161 (311)
T ss_pred             ccccccceeEEeeccCCceEeecCCC-----------------------------CcceEeecCCccEEEEEecCCCCCC
Confidence            9998 556788889999999999865                             456888999999999999995  46


Q ss_pred             eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEE
Q psy2107         288 EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS  365 (391)
Q Consensus       288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~  365 (391)
                      .++++|.|+++++||++.......+..|. .+.++.|+.- .+.|++|+.|+.|+.||++..+.  ++..+.+|.-.|+.
T Consensus       162 lfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~--pl~eL~gh~~AVRk  239 (311)
T KOG0277|consen  162 LFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRT--PLFELNGHGLAVRK  239 (311)
T ss_pred             eEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccc--cceeecCCceEEEE
Confidence            79999999999999998754444466666 9999999985 56889999999999999987553  46788999999999


Q ss_pred             EEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         366 VRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       366 ~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++|||....+|+|++.|-+++|||.
T Consensus       240 vk~Sph~~~lLaSasYDmT~riw~~  264 (311)
T KOG0277|consen  240 VKFSPHHASLLASASYDMTVRIWDP  264 (311)
T ss_pred             EecCcchhhHhhhccccceEEeccc
Confidence            9999988889999999999999985

>KOG0296|consensus

Probab=100.00  E-value=1.5e-30  Score=209.13  Aligned_cols=241  Identities=18%  Similarity=0.298  Sum_probs=197.7

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+..|++.|.+++.+  .++++||+.|..-.+|+. ++.....+.+|+..|+++.|   +.++.+||+|..+|.|+||
T Consensus        57 ~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~F---shdgtlLATGdmsG~v~v~  133 (399)
T KOG0296|consen   57 LVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSF---SHDGTLLATGDMSGKVLVF  133 (399)
T ss_pred             eeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEE---ccCceEEEecCCCccEEEE
Confidence            34566899999999998  459999999999999999 67788899999999999999   7789999999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      +....    .....+...-..+.-+.|+|.+..|+.|+.||.+-+|.+.+                             .
T Consensus       134 ~~stg----~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~-----------------------------~  180 (399)
T KOG0296|consen  134 KVSTG----GEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS-----------------------------Q  180 (399)
T ss_pred             EcccC----ceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCC-----------------------------c
Confidence            96522    33344444567899999999999999999999999999965                             2


Q ss_pred             CceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe----------------------------
Q psy2107         266 TPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK----------------------------  316 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------------------  316 (391)
                      ...+.+.+|..++++=.|.|++ +++++..||+|++||+++++++..+....                            
T Consensus       181 ~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~  260 (399)
T KOG0296|consen  181 ALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGV  260 (399)
T ss_pred             ceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEE
Confidence            4567889999999999999655 59999999999999999999888776210                            


Q ss_pred             ---------------------------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107         317 ---------------------------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       317 ---------------------------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~  369 (391)
                                                 .|-.+.++..-.+.|+|+-||+|.|||+....   + +..-.|...|+.+.|.
T Consensus       261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~---~-R~~c~he~~V~~l~w~  336 (399)
T KOG0296|consen  261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAAST---L-RHICEHEDGVTKLKWL  336 (399)
T ss_pred             ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccch---h-heeccCCCceEEEEEc
Confidence                                       01112222233578899999999999987654   3 3444699999999998


Q ss_pred             CCCCCEEEEeeCCCcEEEEecC
Q psy2107         370 PIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      + . .+|++++.||.|+.||.|
T Consensus       337 ~-t-~~l~t~c~~g~v~~wDaR  356 (399)
T KOG0296|consen  337 N-T-DYLLTACANGKVRQWDAR  356 (399)
T ss_pred             C-c-chheeeccCceEEeeecc
Confidence            7 4 468999999999999987

>KOG0275|consensus

Probab=100.00  E-value=5.7e-32  Score=214.37  Aligned_cols=271  Identities=21%  Similarity=0.338  Sum_probs=222.4

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC------CCcccCCCCcEEEEEec--CCEEEEEECCCeEE
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS------PLDCILHDDWVSAIDFH--NDWILTGCYDHSVH  139 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~  139 (391)
                      -.|+|||++|.+          .+.++.+++|......-+.      .-.+.-|.++|.|+.|+  ...+|+|+.||.|+
T Consensus       219 A~FSPDgqyLvs----------gSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIK  288 (508)
T KOG0275|consen  219 ARFSPDGQYLVS----------GSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIK  288 (508)
T ss_pred             eeeCCCCceEee----------ccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEE
Confidence            479999998864          2344555555433222211      12344589999999999  45999999999999


Q ss_pred             EEcC-CCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         140 IWTR-RGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       140 iwd~-~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      +|.+ ++.++..+. .|...|+|+.|   +.++..+++++.|.++++.-+.    .++++..+++|++.|+...|.++|.
T Consensus       289 vWri~tG~ClRrFdrAHtkGvt~l~F---SrD~SqiLS~sfD~tvRiHGlK----SGK~LKEfrGHsSyvn~a~ft~dG~  361 (508)
T KOG0275|consen  289 VWRIETGQCLRRFDRAHTKGVTCLSF---SRDNSQILSASFDQTVRIHGLK----SGKCLKEFRGHSSYVNEATFTDDGH  361 (508)
T ss_pred             EEEEecchHHHHhhhhhccCeeEEEE---ccCcchhhcccccceEEEeccc----cchhHHHhcCccccccceEEcCCCC
Confidence            9999 677777776 89999999999   7888999999999999998754    5678999999999999999999999


Q ss_pred             EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccC--CeEEEEE
Q psy2107         218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAV--DEIITSS  293 (391)
Q Consensus       218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~--~~l~s~~  293 (391)
                      ++++++.||+|++|+..+...                             +.+++  +...+|.++..-|.  ..++.|.
T Consensus       362 ~iisaSsDgtvkvW~~KtteC-----------------------------~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN  412 (508)
T KOG0275|consen  362 HIISASSDGTVKVWHGKTTEC-----------------------------LSTFKPLGTDYPVNSVILLPKNPEHFIVCN  412 (508)
T ss_pred             eEEEecCCccEEEecCcchhh-----------------------------hhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence            999999999999999987553                             33333  24456777766643  4589999


Q ss_pred             CCCeEEEEecccCceeEEEECC----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGN----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~  369 (391)
                      ..+++.|.++. |+.++.+...    +...+++.+|.|.++.+.+.|+.++.|.+.+++   +...+.-|...|..++-+
T Consensus       413 rsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~---LE~tl~VhEkdvIGl~HH  488 (508)
T KOG0275|consen  413 RSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGK---LERTLPVHEKDVIGLTHH  488 (508)
T ss_pred             CCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCc---eeeeeecccccccccccC
Confidence            99999999875 7777777643    367888999999999999999999999998877   788889999999999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEe
Q psy2107         370 PIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwd  389 (391)
                      | ..+++++-+.||.+++|.
T Consensus       489 P-HqNllAsYsEDgllKLWk  507 (508)
T KOG0275|consen  489 P-HQNLLASYSEDGLLKLWK  507 (508)
T ss_pred             c-ccchhhhhcccchhhhcC
Confidence            9 778999999999999995

>KOG0316|consensus

Probab=100.00  E-value=1.4e-30  Score=197.32  Aligned_cols=268  Identities=19%  Similarity=0.256  Sum_probs=220.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|..+|+...+          --+++++++|...+..  ...+..+|...|..++.+  ...+++|+.|..+.+||+
T Consensus        21 ~avryN~dGnY~lt----------cGsdrtvrLWNp~rg~--liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV   88 (307)
T KOG0316|consen   21 RAVRYNVDGNYCLT----------CGSDRTVRLWNPLRGA--LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDV   88 (307)
T ss_pred             EEEEEccCCCEEEE----------cCCCceEEeecccccc--eeeeecCCCceeeeccccccccccccCCCCceEEEEEc
Confidence            34578889987644          2378999999765433  356677899999998876  569999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                       +++....+.+|.+.|+.++|   +.+...+++|+.|.++++||.+  ....++++.+......|.++..+.  ..|++|
T Consensus        89 ~TGkv~Rr~rgH~aqVNtV~f---NeesSVv~SgsfD~s~r~wDCR--S~s~ePiQildea~D~V~Si~v~~--heIvaG  161 (307)
T KOG0316|consen   89 NTGKVDRRFRGHLAQVNTVRF---NEESSVVASGSFDSSVRLWDCR--SRSFEPIQILDEAKDGVSSIDVAE--HEIVAG  161 (307)
T ss_pred             ccCeeeeecccccceeeEEEe---cCcceEEEeccccceeEEEEcc--cCCCCccchhhhhcCceeEEEecc--cEEEee
Confidence             78888899999999999999   7788899999999999999966  566788999988889999999864  569999


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEE
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIW  301 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iw  301 (391)
                      +.||+++.||++.+...                               ..--..+|++++|++++ -.++++.|+++++.
T Consensus       162 S~DGtvRtydiR~G~l~-------------------------------sDy~g~pit~vs~s~d~nc~La~~l~stlrLl  210 (307)
T KOG0316|consen  162 SVDGTVRTYDIRKGTLS-------------------------------SDYFGHPITSVSFSKDGNCSLASSLDSTLRLL  210 (307)
T ss_pred             ccCCcEEEEEeecceee-------------------------------hhhcCCcceeEEecCCCCEEEEeeccceeeec
Confidence            99999999999875541                               11235689999999655 58889999999999


Q ss_pred             ecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc-EEEEEECCCCCCEEE
Q psy2107         302 DAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW-VQSVRWSPIDPQLFV  377 (391)
Q Consensus       302 d~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~l~  377 (391)
                      |-.+|+.+..+++|.   --..++++.....+++|++||.|++||+....   .+..+..|... |.+++++|.-..++ 
T Consensus       211 Dk~tGklL~sYkGhkn~eykldc~l~qsdthV~sgSEDG~Vy~wdLvd~~---~~sk~~~~~~v~v~dl~~hp~~~~f~-  286 (307)
T KOG0316|consen  211 DKETGKLLKSYKGHKNMEYKLDCCLNQSDTHVFSGSEDGKVYFWDLVDET---QISKLSVVSTVIVTDLSCHPTMDDFI-  286 (307)
T ss_pred             ccchhHHHHHhcccccceeeeeeeecccceeEEeccCCceEEEEEeccce---eeeeeccCCceeEEeeecccCcccee-
Confidence            999999999999886   23567778778899999999999999998765   77778878777 89999999665544 


Q ss_pred             EeeCCCcEEEE
Q psy2107         378 SASFDNSVKLW  388 (391)
Q Consensus       378 s~~~dg~v~iw  388 (391)
                      ++. ++.+..|
T Consensus       287 ~A~-~~~~~~~  296 (307)
T KOG0316|consen  287 TAT-GHGDLFW  296 (307)
T ss_pred             Eec-CCceece
Confidence            443 3455555

>KOG0264|consensus

Probab=99.98  E-value=6.6e-31  Score=217.03  Aligned_cols=249  Identities=22%  Similarity=0.396  Sum_probs=205.1

Q ss_pred             cCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC---c--------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         113 ILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG---E--------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       113 ~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~---~--------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      ..|.+.|+.+.+-   +..+|+++..+.+.|||.+.   .        .-.++.+|...-+.++|.+.  ....+++++.
T Consensus       121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~--~~g~Lls~~~  198 (422)
T KOG0264|consen  121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQ--QEGTLLSGSD  198 (422)
T ss_pred             ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccc--cceeEeeccC
Confidence            3588888888875   66999999999999999732   1        11267789998899999654  5568999999


Q ss_pred             CCcEEEEeecCCCC---ceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107         179 DQTAMIWEWKVESN---SIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       179 dg~v~iwd~~~~~~---~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  254 (391)
                      |++|++||+.....   ...+...+.+|...|..++|++ +..+|++++.|+.+.|||+++. .                
T Consensus       199 d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~-~----------------  261 (422)
T KOG0264|consen  199 DHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSN-T----------------  261 (422)
T ss_pred             CCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCC-C----------------
Confidence            99999999875544   2456778899999999999999 4567899999999999999863 1                


Q ss_pred             cccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEEECCCC-CE
Q psy2107         255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVHYSPLS-KL  329 (391)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~~-~~  329 (391)
                                .++.....+|...|.|++|+|.  ..|++|+.|++|++||+++- +++.++.+|. .|.++.|+|.. ..
T Consensus       262 ----------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etv  331 (422)
T KOG0264|consen  262 ----------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETV  331 (422)
T ss_pred             ----------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCce
Confidence                      3466677899999999999954  45899999999999999975 4566777665 89999999984 58


Q ss_pred             EEEeeCCCcEEEEcCCCCC-----------cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         330 VITASADKQIRLYDPKVKE-----------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~-----------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ||+++.|+.+.|||+..-.           .+.++..-.||...|..+.|+|..+..++|.+.|+.+.||++
T Consensus       332 LASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~  403 (422)
T KOG0264|consen  332 LASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQM  403 (422)
T ss_pred             eEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeec
Confidence            8899999999999986421           133567778999999999999999999999999999999985

>PTZ00420 coronin; Provisional

Probab=99.98  E-value=3.5e-29  Score=224.90  Aligned_cols=227  Identities=13%  Similarity=0.259  Sum_probs=172.2

Q ss_pred             EECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc----eeEEEEEecCCCC
Q psy2107         132 GCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS----IECIHVCRGHERG  206 (391)
Q Consensus       132 ~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~~~  206 (391)
                      |+.+|.|++|+. +...+..+.+|.+.|.+++|+|.  ++.+|++|+.||+|++||+......    ..++..+.+|...
T Consensus        50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~--~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~  127 (568)
T PTZ00420         50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPC--FSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKK  127 (568)
T ss_pred             CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCC--CCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCc
Confidence            667889999998 55567788999999999999543  3679999999999999997532211    1245567899999


Q ss_pred             eEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         207 LETVTVSESRQQ-FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       207 v~~l~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      |.+++|+|++.. |++|+.|+.|++||+++++                             ....+. |...|.+++|++
T Consensus       128 V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~-----------------------------~~~~i~-~~~~V~Slswsp  177 (568)
T PTZ00420        128 ISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK-----------------------------RAFQIN-MPKKLSSLKWNI  177 (568)
T ss_pred             EEEEEECCCCCeEEEEEeCCCeEEEEECCCCc-----------------------------EEEEEe-cCCcEEEEEECC
Confidence            999999998875 5789999999999997633                             233343 557899999996


Q ss_pred             CCe-EEEEECCCeEEEEecccCceeEEEECCee------eEEEEECCCCCEEEEeeCCC----cEEEEcCCCCCcceEEE
Q psy2107         286 VDE-IITSSWDHTLKIWDAELGGMKSEIVGNKS------FFDVHYSPLSKLVITASADK----QIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       286 ~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------i~~~~~~p~~~~l~~g~~dg----~i~iwd~~~~~~~~~~~  354 (391)
                      ++. |++++.|+.|+|||+++++.+.++..|..      +....|++++.+|++++.|+    .|+|||++....+....
T Consensus       178 dG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~  257 (568)
T PTZ00420        178 KGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTM  257 (568)
T ss_pred             CCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEE
Confidence            655 67778899999999999999988887652      23344678999999887664    79999998644333333


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+..+.+.+.. .|.++.+.++++|+.|+.|++|+++
T Consensus       258 ~ld~~~~~L~p-~~D~~tg~l~lsGkGD~tIr~~e~~  293 (568)
T PTZ00420        258 SIDNASAPLIP-HYDESTGLIYLIGKGDGNCRYYQHS  293 (568)
T ss_pred             EecCCccceEE-eeeCCCCCEEEEEECCCeEEEEEcc
Confidence            33334443333 3445477889999999999999974

>KOG0318|consensus

Probab=99.98  E-value=1.2e-29  Score=213.18  Aligned_cols=270  Identities=20%  Similarity=0.294  Sum_probs=220.2

Q ss_pred             eEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECC----CeEEEEc
Q psy2107          69 DFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYD----HSVHIWT  142 (391)
Q Consensus        69 ~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d----g~i~iwd  142 (391)
                      .|+|+|..+++          ....+.+++|...........++..-.++|..++|+  ++++++.+..    |.+.+||
T Consensus        66 kySPsG~yiAS----------GD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D  135 (603)
T KOG0318|consen   66 KYSPSGFYIAS----------GDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHVFLWD  135 (603)
T ss_pred             EeCCCceEEee----------cCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEEEEec
Confidence            67888887776          456788899987543333233344467899999998  5566666543    4677777


Q ss_pred             CCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         143 RRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       143 ~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                      . +..+..+.+|...|+++.|-|..|  -.+++|+.|++|.+|+    ...++....+..|..-|.|+.|+|||.+++++
T Consensus       136 S-G~SvGei~GhSr~ins~~~KpsRP--fRi~T~sdDn~v~ffe----GPPFKFk~s~r~HskFV~~VRysPDG~~Fat~  208 (603)
T KOG0318|consen  136 S-GNSVGEITGHSRRINSVDFKPSRP--FRIATGSDDNTVAFFE----GPPFKFKSSFREHSKFVNCVRYSPDGSRFATA  208 (603)
T ss_pred             C-CCccceeeccceeEeeeeccCCCc--eEEEeccCCCeEEEee----CCCeeeeecccccccceeeEEECCCCCeEEEe
Confidence            4 455667889999999999966533  3799999999999997    44667778888999999999999999999999


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec---CccCcccEEEeccCC-eEEEEECCCeE
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK---GHKEAISAVQWTAVD-EIITSSWDHTL  298 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~-~l~s~~~dg~i  298 (391)
                      +.||.+.+||-.+++.                             +..+.   +|++.|.+++|+|++ ++++++.|.++
T Consensus       209 gsDgki~iyDGktge~-----------------------------vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~  259 (603)
T KOG0318|consen  209 GSDGKIYIYDGKTGEK-----------------------------VGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTI  259 (603)
T ss_pred             cCCccEEEEcCCCccE-----------------------------EEEecCCCCccccEEEEEECCCCceEEEecCCceE
Confidence            9999999999887553                             34444   899999999999665 59999999999


Q ss_pred             EEEecccCceeEEEECCee----eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         299 KIWDAELGGMKSEIVGNKS----FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~~----i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      +|||+.+.+++.++.....    ...+.|.  +..|++-+.+|.|.++++....   +...+.+|...|++++.+| ++.
T Consensus       260 KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--kd~lItVSl~G~in~ln~~d~~---~~~~i~GHnK~ITaLtv~~-d~~  333 (603)
T KOG0318|consen  260 KIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--KDHLITVSLSGTINYLNPSDPS---VLKVISGHNKSITALTVSP-DGK  333 (603)
T ss_pred             EEEEeeccceEEEeecCCchhceEEEEEEe--CCeEEEEEcCcEEEEecccCCC---hhheecccccceeEEEEcC-CCC
Confidence            9999999999999986553    3445565  6788889999999999988766   7778899999999999999 558


Q ss_pred             EEEEeeCCCcEEEEec
Q psy2107         375 LFVSASFDNSVKLWDL  390 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdl  390 (391)
                      +|.||+.||.|.-||+
T Consensus       334 ~i~SgsyDG~I~~W~~  349 (603)
T KOG0318|consen  334 TIYSGSYDGHINSWDS  349 (603)
T ss_pred             EEEeeccCceEEEEec
Confidence            9999999999999986

>KOG1332|consensus

Probab=99.98  E-value=3.3e-31  Score=201.82  Aligned_cols=247  Identities=21%  Similarity=0.357  Sum_probs=198.5

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC--C--ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR--G--EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~--~--~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .+|.+.|..+..+  |++|||++.|++|+|+...  +  ..+..+.+|.++|+.++|.. ...|.+||+++.||.|.||.
T Consensus         8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wah-Pk~G~iLAScsYDgkVIiWk   86 (299)
T KOG1332|consen    8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAH-PKFGTILASCSYDGKVIIWK   86 (299)
T ss_pred             hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecc-cccCcEeeEeecCceEEEEe
Confidence            3588888877655  9999999999999999983  2  45678999999999999964 23688999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                        .+.+.+........|...|++++|.|.  |-.|++++.||.|.+.+.+....                          
T Consensus        87 --e~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~--------------------------  138 (299)
T KOG1332|consen   87 --EENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGG--------------------------  138 (299)
T ss_pred             --cCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCC--------------------------
Confidence              445677777888899999999999884  57899999999999999876311                          


Q ss_pred             CCceeeecCccCcccEEEeccC---------------CeEEEEECCCeEEEEecccCc--eeEEEECCe-eeEEEEECCC
Q psy2107         265 RTPLITLKGHKEAISAVQWTAV---------------DEIITSSWDHTLKIWDAELGG--MKSEIVGNK-SFFDVHYSPL  326 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~---------------~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~-~i~~~~~~p~  326 (391)
                      .........|.-.|++++|.|.               .+|++|+.|..|+||+..++.  ...++..|. -++.++|.|.
T Consensus       139 w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~  218 (299)
T KOG1332|consen  139 WTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPS  218 (299)
T ss_pred             ccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccc
Confidence            1223345679999999999854               359999999999999998764  334456665 7899999997


Q ss_pred             C----CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         327 S----KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       327 ~----~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      -    .+||+++.||.+.||..+....+-....+......+..+.||+ .+++|+.++.|+.|.+|.
T Consensus       219 ~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~-sGn~LaVs~GdNkvtlwk  284 (299)
T KOG1332|consen  219 VGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSL-SGNILAVSGGDNKVTLWK  284 (299)
T ss_pred             cCCCceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEec-cccEEEEecCCcEEEEEE
Confidence            3    4899999999999998764322222334445667899999999 677899999999999994

>KOG0292|consensus

Probab=99.98  E-value=2.5e-30  Score=229.67  Aligned_cols=301  Identities=20%  Similarity=0.333  Sum_probs=227.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.|..-.+.+++          ..+.+.+|+.+...-  ...+.+|.++|..++|+  +.++++|+.|-.|+||+.
T Consensus        13 KglsFHP~rPwILtsl----------HsG~IQlWDYRM~tl--i~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnY   80 (1202)
T KOG0292|consen   13 KGLSFHPKRPWILTSL----------HSGVIQLWDYRMGTL--IDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNY   80 (1202)
T ss_pred             cceecCCCCCEEEEee----------cCceeeeehhhhhhH--HhhhhccCCccceeeecCCCCeEEecCCccEEEEEec
Confidence            4467777764444322          467889997754332  34556799999999999  559999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                       +.+++.++.+|-..|..+.|   ++.-..++++|.|.+|+||++.    ...++..+.||...|.|..|+|...+++++
T Consensus        81 k~rrclftL~GHlDYVRt~~F---HheyPWIlSASDDQTIrIWNwq----sr~~iavltGHnHYVMcAqFhptEDlIVSa  153 (1202)
T KOG0292|consen   81 KTRRCLFTLLGHLDYVRTVFF---HHEYPWILSASDDQTIRIWNWQ----SRKCIAVLTGHNHYVMCAQFHPTEDLIVSA  153 (1202)
T ss_pred             ccceehhhhccccceeEEeec---cCCCceEEEccCCCeEEEEecc----CCceEEEEecCceEEEeeccCCccceEEEe
Confidence             45666799999999999999   5566799999999999999975    557899999999999999999999999999


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEE
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIW  301 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iw  301 (391)
                      |-|.+|++||+..-+.....+......................-..+.+.+|...|+-++|+|. ..+++|+.|..|++|
T Consensus       154 SLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlW  233 (1202)
T KOG0292|consen  154 SLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLW  233 (1202)
T ss_pred             cccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEE
Confidence            9999999999975443322211000000000000001111122344568899999999999975 458899999999999


Q ss_pred             ecccCce--eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107         302 DAELGGM--KSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       302 d~~~~~~--~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  378 (391)
                      .....+.  +-+..+|. .|.++-|+|..+++++.+.|++|+|||+...+   .+..++.-.+.-+.++-+| ..++++ 
T Consensus       234 rmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt---~v~tfrrendRFW~laahP-~lNLfA-  308 (1202)
T KOG0292|consen  234 RMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRT---SVQTFRRENDRFWILAAHP-ELNLFA-  308 (1202)
T ss_pred             EeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEeccccc---ceeeeeccCCeEEEEEecC-Ccceee-
Confidence            9875442  33444554 89999999999999999999999999998766   6677776677899999999 666555 


Q ss_pred             eeCCCcEEEEec
Q psy2107         379 ASFDNSVKLWDL  390 (391)
Q Consensus       379 ~~~dg~v~iwdl  390 (391)
                      ++.|+-+.||.+
T Consensus       309 AgHDsGm~VFkl  320 (1202)
T KOG0292|consen  309 AGHDSGMIVFKL  320 (1202)
T ss_pred             eecCCceEEEEE
Confidence            555666666654

>PTZ00421 coronin; Provisional

Probab=99.98  E-value=2.1e-29  Score=225.28  Aligned_cols=234  Identities=21%  Similarity=0.309  Sum_probs=176.5

Q ss_pred             ecCCEEEEEECCCeEEEEcCCCce--------------EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         124 FHNDWILTGCYDHSVHIWTRRGEH--------------KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       124 ~~~~~l~t~~~dg~i~iwd~~~~~--------------~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      +++..+++++.+.....|+..+..              ...+.+|.+.|++++|+|.  ++.+|++|+.||+|++||+..
T Consensus        30 ~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~--d~~~LaSgS~DgtIkIWdi~~  107 (493)
T PTZ00421         30 WDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPF--DPQKLFTASEDGTIMGWGIPE  107 (493)
T ss_pred             CCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCC--CCCEEEEEeCCCEEEEEecCC
Confidence            344455666666666666543221              1135689999999999543  677999999999999999753


Q ss_pred             CC---CceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         190 ES---NSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       190 ~~---~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      ..   ....++..+.+|...|.+++|+|++ ++|++|+.|+.|++||++++                             
T Consensus       108 ~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg-----------------------------  158 (493)
T PTZ00421        108 EGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG-----------------------------  158 (493)
T ss_pred             CccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC-----------------------------
Confidence            21   1124567888999999999999975 68999999999999999763                             


Q ss_pred             CceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEee----CCCc
Q psy2107         266 TPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITAS----ADKQ  338 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~----~dg~  338 (391)
                      .....+.+|...|.+++|++++ .|++++.|+.|++||+++++.+..+..|.  ....+.|.+++..+++++    .|+.
T Consensus       159 ~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~  238 (493)
T PTZ00421        159 KAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQ  238 (493)
T ss_pred             eEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCe
Confidence            3566778899999999999655 58899999999999999999988887765  345678899888777654    4789


Q ss_pred             EEEEcCCCCCcceEEEEec-cccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr  391 (391)
                      |++||++....+  ..... .+...+....|++ ++.+|++++ .||.|++||++
T Consensus       239 VklWDlr~~~~p--~~~~~~d~~~~~~~~~~d~-d~~~L~lggkgDg~Iriwdl~  290 (493)
T PTZ00421        239 IMLWDTRKMASP--YSTVDLDQSSALFIPFFDE-DTNLLYIGSKGEGNIRCFELM  290 (493)
T ss_pred             EEEEeCCCCCCc--eeEeccCCCCceEEEEEcC-CCCEEEEEEeCCCeEEEEEee
Confidence            999999865432  22222 2334566677888 556677776 59999999984

>KOG0283|consensus

Probab=99.98  E-value=1.5e-30  Score=230.54  Aligned_cols=234  Identities=22%  Similarity=0.393  Sum_probs=188.8

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC----------------------------------------------
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG----------------------------------------------  145 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~----------------------------------------------  145 (391)
                      .|.+.|.++.|+  |++||+|+.||.|+||.+..                                              
T Consensus       265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~  344 (712)
T KOG0283|consen  265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ  344 (712)
T ss_pred             ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence            699999999998  88999999999999997622                                              


Q ss_pred             ---------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107         146 ---------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV  210 (391)
Q Consensus       146 ---------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l  210 (391)
                                     ..+..+.+|.+.|..+.|   + ..++|++++.|.+|++|++.    ...|+..|. |..-|+|+
T Consensus       345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSW---S-Kn~fLLSSSMDKTVRLWh~~----~~~CL~~F~-HndfVTcV  415 (712)
T KOG0283|consen  345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSW---S-KNNFLLSSSMDKTVRLWHPG----RKECLKVFS-HNDFVTCV  415 (712)
T ss_pred             CccccCCCccccccccchhhhhccchhheeccc---c-cCCeeEeccccccEEeecCC----CcceeeEEe-cCCeeEEE
Confidence                           001123589999999999   4 35689999999999999954    456777775 99999999


Q ss_pred             EEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-
Q psy2107         211 TVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-  288 (391)
Q Consensus       211 ~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  288 (391)
                      +|+| |.++|++|+-||.|+||++..                              ..+..+..-..-|++++|.|+|. 
T Consensus       416 aFnPvDDryFiSGSLD~KvRiWsI~d------------------------------~~Vv~W~Dl~~lITAvcy~PdGk~  465 (712)
T KOG0283|consen  416 AFNPVDDRYFISGSLDGKVRLWSISD------------------------------KKVVDWNDLRDLITAVCYSPDGKG  465 (712)
T ss_pred             EecccCCCcEeecccccceEEeecCc------------------------------CeeEeehhhhhhheeEEeccCCce
Confidence            9999 789999999999999999964                              23334444458899999997665 


Q ss_pred             EEEEECCCeEEEEecccCceeEEEEC---------CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEecc
Q psy2107         289 IITSSWDHTLKIWDAELGGMKSEIVG---------NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~  358 (391)
                      .+.|+.+|.+++|+....+.......         +..|+.+.|.|... .+++.+.|..|+|||.+...   ++..++|
T Consensus       466 avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~---lv~KfKG  542 (712)
T KOG0283|consen  466 AVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKD---LVHKFKG  542 (712)
T ss_pred             EEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchh---hhhhhcc
Confidence            88999999999999987776655431         23799999998643 46666789999999987665   7777776


Q ss_pred             ccC--cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKE--WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..  .-....|+. ++.+|+++++|..|+||++
T Consensus       543 ~~n~~SQ~~Asfs~-Dgk~IVs~seDs~VYiW~~  575 (712)
T KOG0283|consen  543 FRNTSSQISASFSS-DGKHIVSASEDSWVYIWKN  575 (712)
T ss_pred             cccCCcceeeeEcc-CCCEEEEeecCceEEEEeC
Confidence            543  345678998 7778999999999999986

>KOG0274|consensus

Probab=99.97  E-value=2.9e-30  Score=231.04  Aligned_cols=231  Identities=27%  Similarity=0.512  Sum_probs=205.9

Q ss_pred             CCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEe-ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         115 HDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLN-IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       115 h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~-~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      |...+.|..+.++++++++.|++|++|+. ++..+.. +.+|.+.|+++++   ..-+.++++|+.|.++++||..    
T Consensus       207 ~~~~~~~~q~~~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~---~~~~~~lvsgS~D~t~rvWd~~----  279 (537)
T KOG0274|consen  207 DDHVVLCLQLHDGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAF---PSGGDKLVSGSTDKTERVWDCS----  279 (537)
T ss_pred             CcchhhhheeecCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEE---ecCCCEEEEEecCCcEEeEecC----
Confidence            67789999999999999999999999998 6777776 9999999999999   4357799999999999999954    


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ...+...+.+|...|.++...+  .++++|+.|.+|++|++.+                             ...+..+.
T Consensus       280 sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n-----------------------------~~~l~l~~  328 (537)
T KOG0274|consen  280 TGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTN-----------------------------GACLNLLR  328 (537)
T ss_pred             CCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccC-----------------------------cceEEEec
Confidence            6689999999999999998765  4688899999999999976                             45778888


Q ss_pred             CccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      +|..+|.++..+ .+.+++|+.|++|++||+.+++++.++.+|. .|.++.+.+. ..+++|+.|+.|++||+++..  .
T Consensus       329 ~h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~--~  404 (537)
T KOG0274|consen  329 GHTGPVNCVQLD-EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKR--K  404 (537)
T ss_pred             cccccEEEEEec-CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchh--h
Confidence            899999999998 6899999999999999999999999999887 8999988765 899999999999999998872  2


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++..+.+|...|..+.+.   .++|++++.||+|++||.
T Consensus       405 c~~tl~~h~~~v~~l~~~---~~~Lvs~~aD~~Ik~WD~  440 (537)
T KOG0274|consen  405 CIHTLQGHTSLVSSLLLR---DNFLVSSSADGTIKLWDA  440 (537)
T ss_pred             hhhhhcCCcccccccccc---cceeEeccccccEEEeec
Confidence            888999999999888774   468999999999999986

>KOG1407|consensus

Probab=99.97  E-value=6.5e-30  Score=196.64  Aligned_cols=268  Identities=20%  Similarity=0.261  Sum_probs=209.3

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+|...|.+++|+  |..|++|+.|+++++|++....   .....+|.+.|-.++|.|.+  ...+++++.|.+|++|
T Consensus        15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~--~d~~atas~dk~ir~w   92 (313)
T KOG1407|consen   15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKH--PDLFATASGDKTIRIW   92 (313)
T ss_pred             HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCC--CcceEEecCCceEEEE
Confidence            345789999999998  8899999999999999995432   22456899999999998764  4589999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC-----------CCC-cccc
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG-----------DEG-TTSK  253 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-----------~~~-~~~~  253 (391)
                      |++    ..++........+ =.-+.|+|+|++++.++.|..|...|.++.+.........           ... ....
T Consensus        93 d~r----~~k~~~~i~~~~e-ni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G  167 (313)
T KOG1407|consen   93 DIR----SGKCTARIETKGE-NINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG  167 (313)
T ss_pred             Eec----cCcEEEEeeccCc-ceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence            977    3355555554333 3457899999999999999999999998766543221111           000 0111


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEE
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVI  331 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~  331 (391)
                      ............+++..++.|.....|+.|+|.|+ |++|+.|..+.+||+..--+.+.+.... +|..+.|+-+|++||
T Consensus       168 lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lA  247 (313)
T KOG1407|consen  168 LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLA  247 (313)
T ss_pred             CceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceee
Confidence            11222333456789999999999999999997665 9999999999999999988888887665 999999999999999


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC---------CcEEEEec
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---------NSVKLWDL  390 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---------g~v~iwdl  390 (391)
                      +|+.|..|-|=++.++.   .+..++ +.++-..++|+| ...+||-++.|         |.|++|-+
T Consensus       248 SaSEDh~IDIA~vetGd---~~~eI~-~~~~t~tVAWHP-k~~LLAyA~ddk~~d~~reag~vKiFG~  310 (313)
T KOG1407|consen  248 SASEDHFIDIAEVETGD---RVWEIP-CEGPTFTVAWHP-KRPLLAYACDDKDGDSNREAGTVKIFGL  310 (313)
T ss_pred             ccCccceEEeEecccCC---eEEEee-ccCCceeEEecC-CCceeeEEecCCCCccccccceeEEecC
Confidence            99999999999998877   444554 788999999999 66788877765         57777754

>KOG0313|consensus

Probab=99.97  E-value=6.8e-30  Score=206.32  Aligned_cols=257  Identities=20%  Similarity=0.383  Sum_probs=205.2

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--C---CEEEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEE
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--N---DWILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGV  161 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~---~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l  161 (391)
                      -++..++|...   ........||.++|.++++.  .   ..+++++.|.++++|-.+.     .......+|...|-++
T Consensus       123 YDg~~riWd~~---Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sV  199 (423)
T KOG0313|consen  123 YDGTSRIWDLK---GKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSV  199 (423)
T ss_pred             cCCeeEEEecC---CceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEE
Confidence            45666777653   33457788999999988885  2   2699999999999998732     1223345999999999


Q ss_pred             EEEecCCCCeEEEEEeCCCcEEEEeecC---------------------CCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107         162 AWLYNDGKDAAFISVSTDQTAMIWEWKV---------------------ESNSIECIHVCRGHERGLETVTVSESRQQFA  220 (391)
Q Consensus       162 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~---------------------~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~  220 (391)
                      +.   .+++..+++|+.|.++.+|+...                     ......++..+.+|..+|.++.|++ ...+.
T Consensus       200 sv---~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~y  275 (423)
T KOG0313|consen  200 SV---DSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIY  275 (423)
T ss_pred             Ee---cCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceE
Confidence            99   77899999999999999999321                     1123456778899999999999998 56799


Q ss_pred             EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEE
Q psy2107         221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLK  299 (391)
Q Consensus       221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~  299 (391)
                      +++.|.+|+.||+.++..                             ...+. ......++.+++. ..|++|+.|..++
T Consensus       276 S~SwDHTIk~WDletg~~-----------------------------~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~ir  325 (423)
T KOG0313|consen  276 SVSWDHTIKVWDLETGGL-----------------------------KSTLT-TNKSLNCISYSPLSKLLASGSSDRHIR  325 (423)
T ss_pred             eecccceEEEEEeecccc-----------------------------eeeee-cCcceeEeecccccceeeecCCCCcee
Confidence            999999999999988553                             33333 3567889999854 5588999999999


Q ss_pred             EEecccCc---eeEEEECCe-eeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         300 IWDAELGG---MKSEIVGNK-SFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       300 iwd~~~~~---~~~~~~~~~-~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      +||.+++.   ..+++.+|. .|.++.|+|... .|++|+.|+++++||+|....  ++..+.+|...|.++.|+.  +.
T Consensus       326 l~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~--plydI~~h~DKvl~vdW~~--~~  401 (423)
T KOG0313|consen  326 LWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKA--PLYDIAGHNDKVLSVDWNE--GG  401 (423)
T ss_pred             ecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCC--cceeeccCCceEEEEeccC--Cc
Confidence            99998764   345666665 788999999865 678999999999999987543  4568889999999999985  44


Q ss_pred             EEEEeeCCCcEEEEe
Q psy2107         375 LFVSASFDNSVKLWD  389 (391)
Q Consensus       375 ~l~s~~~dg~v~iwd  389 (391)
                      +++|||.|++|+|+.
T Consensus       402 ~IvSGGaD~~l~i~~  416 (423)
T KOG0313|consen  402 LIVSGGADNKLRIFK  416 (423)
T ss_pred             eEEeccCcceEEEec
Confidence            799999999999985

>KOG0640|consensus

Probab=99.97  E-value=1.8e-30  Score=204.59  Aligned_cols=249  Identities=17%  Similarity=0.223  Sum_probs=198.5

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-------------------ceEEeccCCCCCeeEEEEEecCC
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-------------------EHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-------------------~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      ..+..|..++.+-+|+  |.+++||+.|.+|+|.|+..                   ..+.++..|...|+++.|   +|
T Consensus       106 ~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~F---HP  182 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDF---HP  182 (430)
T ss_pred             EEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceee---cc
Confidence            3455699999999998  77999999999999999641                   245677889999999999   55


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ....|++|+.|++|+++|+.....  +.-........+|.++.|+|.|.+|+.|.....+++||+++-+...        
T Consensus       183 re~ILiS~srD~tvKlFDfsK~sa--KrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfv--------  252 (430)
T KOG0640|consen  183 RETILISGSRDNTVKLFDFSKTSA--KRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFV--------  252 (430)
T ss_pred             hhheEEeccCCCeEEEEecccHHH--HHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEee--------
Confidence            678999999999999999763221  1112222346789999999999999999999999999998855422        


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEE---CCeeeEEEEEC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYS  324 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~  324 (391)
                                        ....-..|.+.|+++.+++.+. .++++.||.|++||--+++++.++.   +...|.+..|.
T Consensus       253 ------------------sanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ft  314 (430)
T KOG0640|consen  253 ------------------SANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFT  314 (430)
T ss_pred             ------------------ecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEc
Confidence                              1112346899999999996555 7889999999999999999988875   23489999999


Q ss_pred             CCCCEEEEeeCCCcEEEEcCCCCCcce----------------------------------------------EEEEecc
Q psy2107         325 PLSKLVITASADKQIRLYDPKVKEGAI----------------------------------------------VKSTFSS  358 (391)
Q Consensus       325 p~~~~l~~g~~dg~i~iwd~~~~~~~~----------------------------------------------~~~~~~~  358 (391)
                      .+|+|+++.+.|..+++|.+.++....                                              ....-.+
T Consensus       315 kn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slg  394 (430)
T KOG0640|consen  315 KNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLG  394 (430)
T ss_pred             cCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccC
Confidence            999999999999999999987653000                                              0001135


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |.+.+..+.-+| .+.-++||+.|-..++|--
T Consensus       395 Hn~a~R~i~HSP-~~p~FmTcsdD~raRFWyr  425 (430)
T KOG0640|consen  395 HNGAVRWIVHSP-VEPAFMTCSDDFRARFWYR  425 (430)
T ss_pred             CCCCceEEEeCC-CCCceeeecccceeeeeee
Confidence            899999999999 4556999999999999953

>KOG0306|consensus

Probab=99.97  E-value=1.9e-29  Score=220.38  Aligned_cols=274  Identities=20%  Similarity=0.340  Sum_probs=223.6

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ..++|+.+..++.+           ...+.+.+|......-.....    .+.+.|..|.  ++++++|...|.+.+||+
T Consensus       377 Rsl~vS~d~~~~~S-----------ga~~SikiWn~~t~kciRTi~----~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdl  441 (888)
T KOG0306|consen  377 RSLCVSSDSILLAS-----------GAGESIKIWNRDTLKCIRTIT----CGYILASKFVPGDRYIVLGTKNGELQVFDL  441 (888)
T ss_pred             eEEEeecCceeeee-----------cCCCcEEEEEccCcceeEEec----cccEEEEEecCCCceEEEeccCCceEEEEe
Confidence            56788877766654           235678888765433322222    2377788886  459999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC---ceeEEEEEe-----cCCCCeEEEEEcC
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN---SIECIHVCR-----GHERGLETVTVSE  214 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---~~~~~~~~~-----~~~~~v~~l~~~~  214 (391)
                       ....+.++..|.+.|++++.   .|++..+++|+.|.+|++||+.....   ....+..+.     .-...|.|+++||
T Consensus       442 aS~~l~Eti~AHdgaIWsi~~---~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp  518 (888)
T KOG0306|consen  442 ASASLVETIRAHDGAIWSISL---SPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP  518 (888)
T ss_pred             ehhhhhhhhhccccceeeeee---cCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC
Confidence             56667788899999999999   67888999999999999999753221   111111111     1356899999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEE
Q psy2107         215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSS  293 (391)
Q Consensus       215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~  293 (391)
                      |+++|+++--|.++++|-+++                             .+....+.||.-||.||..+++ ..+++||
T Consensus       519 dgk~LaVsLLdnTVkVyflDt-----------------------------lKFflsLYGHkLPV~smDIS~DSklivTgS  569 (888)
T KOG0306|consen  519 DGKLLAVSLLDNTVKVYFLDT-----------------------------LKFFLSLYGHKLPVLSMDISPDSKLIVTGS  569 (888)
T ss_pred             CCcEEEEEeccCeEEEEEecc-----------------------------eeeeeeecccccceeEEeccCCcCeEEecc
Confidence            999999999999999999987                             4567788999999999999955 5599999


Q ss_pred             CCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID  372 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  372 (391)
                      .|.+|++|-+.-|.+-+.+..|. .|+++.|.|...++.+++.|+.|+-||-..-.   .+..+.+|...|++++.+| +
T Consensus       570 ADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe---~iq~L~~H~~ev~cLav~~-~  645 (888)
T KOG0306|consen  570 ADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFE---EIQKLDGHHSEVWCLAVSP-N  645 (888)
T ss_pred             CCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhh---hheeeccchheeeeeEEcC-C
Confidence            99999999999999988887665 89999999999999999999999999966544   7889999999999999999 6


Q ss_pred             CCEEEEeeCCCcEEEEec
Q psy2107         373 PQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdl  390 (391)
                      +.+++|+|.|.+|++|.-
T Consensus       646 G~~vvs~shD~sIRlwE~  663 (888)
T KOG0306|consen  646 GSFVVSSSHDKSIRLWER  663 (888)
T ss_pred             CCeEEeccCCceeEeeec
Confidence            678999999999999963

>KOG0288|consensus

Probab=99.97  E-value=6e-31  Score=214.59  Aligned_cols=269  Identities=19%  Similarity=0.318  Sum_probs=217.0

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      ...+-.|.+.|..+.|-  .+.|++|+.|..|++|++.+.   ...++.+..+.|+++.|   ++++..+++++.|+.++
T Consensus       168 ~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~---d~~~~~~iAas~d~~~r  244 (459)
T KOG0288|consen  168 LFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDF---DSDNKHVIAASNDKNLR  244 (459)
T ss_pred             hhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeee---cCCCceEEeecCCCcee
Confidence            34445699999999997  479999999999999999554   45577788899999999   88899999999999999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC----------Ccccc
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE----------GTTSK  253 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~----------~~~~~  253 (391)
                      +|+++    ..+...++.+|++.|+++.|......+++|+.|.+|++||+........+.+....          .....
T Consensus       245 ~Wnvd----~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~  320 (459)
T KOG0288|consen  245 LWNVD----SLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHF  320 (459)
T ss_pred             eeecc----chhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeeccc
Confidence            99965    55778899999999999999887777999999999999999876554443222211          11111


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC-----eeeEEEEECCCC
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLS  327 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~  327 (391)
                      .....+++.....+......+. .|+++..+.++ .+++++.|.++.+.|+++......+...     ...+.+.|||++
T Consensus       321 DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~  399 (459)
T KOG0288|consen  321 DKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDG  399 (459)
T ss_pred             ccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCC
Confidence            2223456667777777777665 89999999555 4999999999999999999988887643     368899999999


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC--cEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE--WVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .|+++|+.||.|+||++.+++   +...+.....  .|++++|+| .+..|++++.++.+.+|.
T Consensus       400 ~YvaAGS~dgsv~iW~v~tgK---lE~~l~~s~s~~aI~s~~W~~-sG~~Llsadk~~~v~lW~  459 (459)
T KOG0288|consen  400 SYVAAGSADGSVYIWSVFTGK---LEKVLSLSTSNAAITSLSWNP-SGSGLLSADKQKAVTLWT  459 (459)
T ss_pred             ceeeeccCCCcEEEEEccCce---EEEEeccCCCCcceEEEEEcC-CCchhhcccCCcceEecC
Confidence            999999999999999998877   5555544333  599999999 666799999999999993

>PTZ00421 coronin; Provisional

Probab=99.97  E-value=2.4e-28  Score=218.57  Aligned_cols=223  Identities=16%  Similarity=0.207  Sum_probs=173.7

Q ss_pred             CcccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCC--------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         110 LDCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRG--------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      ..+.+|.+.|++++|++   ++|++|+.||+|++||+..        ..+..+.+|...|.+++|+|.  ...+|++|+.
T Consensus        69 ~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~--~~~iLaSgs~  146 (493)
T PTZ00421         69 PILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPS--AMNVLASAGA  146 (493)
T ss_pred             ceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcC--CCCEEEEEeC
Confidence            44678999999999973   5999999999999999843        245678899999999999543  2468999999


Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |++|++||++    ....+..+.+|...|.+++|+|++.+|++|+.|+.|++||++++                      
T Consensus       147 DgtVrIWDl~----tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg----------------------  200 (493)
T PTZ00421        147 DMVVNVWDVE----RGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG----------------------  200 (493)
T ss_pred             CCEEEEEECC----CCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCC----------------------
Confidence            9999999975    33567778889999999999999999999999999999999863                      


Q ss_pred             cccCCCCCceeeecCccCcc-cEEEecc-CCeEEEEE----CCCeEEEEecccCc-eeEEEECC--eeeEEEEECCCCCE
Q psy2107         259 YSSASSRTPLITLKGHKEAI-SAVQWTA-VDEIITSS----WDHTLKIWDAELGG-MKSEIVGN--KSFFDVHYSPLSKL  329 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v-~~~~~~~-~~~l~s~~----~dg~i~iwd~~~~~-~~~~~~~~--~~i~~~~~~p~~~~  329 (391)
                             ..+..+.+|...+ ..+.|.+ .+.+++++    .|+.|++||+++.. +......+  ..+....|++++++
T Consensus       201 -------~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~  273 (493)
T PTZ00421        201 -------TIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNL  273 (493)
T ss_pred             -------cEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCE
Confidence                   3556677786653 4567774 45666654    47999999998754 33333322  35566789999999


Q ss_pred             EEEee-CCCcEEEEcCCCCCcceEEEEe-ccccCcEEEEEECC
Q psy2107         330 VITAS-ADKQIRLYDPKVKEGAIVKSTF-SSHKEWVQSVRWSP  370 (391)
Q Consensus       330 l~~g~-~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~  370 (391)
                      |++|+ .|+.|++||+..+.   +.... ..+..++..++|.|
T Consensus       274 L~lggkgDg~Iriwdl~~~~---~~~~~~~~s~~~~~g~~~~p  313 (493)
T PTZ00421        274 LYIGSKGEGNIRCFELMNER---LTFCSSYSSVEPHKGLCMMP  313 (493)
T ss_pred             EEEEEeCCCeEEEEEeeCCc---eEEEeeccCCCCCcceEecc
Confidence            98887 59999999998755   33222 23556788888888

>KOG0310|consensus

Probab=99.97  E-value=1.1e-29  Score=211.41  Aligned_cols=234  Identities=17%  Similarity=0.284  Sum_probs=193.6

Q ss_pred             CCCcEEEEEecC----CEEEEEECCCeEEEEcCCCce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         115 HDDWVSAIDFHN----DWILTGCYDHSVHIWTRRGEH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       115 h~~~V~~~~~~~----~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      ..+.|++++|++    ++.+|+|.  .+.||+..+.. ..++......|.++.|   ..||.++++|...|.|+++|+. 
T Consensus        25 e~~~vssl~fsp~~P~d~aVt~S~--rvqly~~~~~~~~k~~srFk~~v~s~~f---R~DG~LlaaGD~sG~V~vfD~k-   98 (487)
T KOG0310|consen   25 EHNSVSSLCFSPKHPYDFAVTSSV--RVQLYSSVTRSVRKTFSRFKDVVYSVDF---RSDGRLLAAGDESGHVKVFDMK-   98 (487)
T ss_pred             ccCcceeEecCCCCCCceEEeccc--EEEEEecchhhhhhhHHhhccceeEEEe---ecCCeEEEccCCcCcEEEeccc-
Confidence            345899999995    45555554  69999985544 3456677889999999   7799999999999999999943 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                         ....+..+.+|+.+|..+.|+|++ ..+++|+.|+.+++||+.+                             ....
T Consensus        99 ---~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~-----------------------------a~v~  146 (487)
T KOG0310|consen   99 ---SRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLST-----------------------------AYVQ  146 (487)
T ss_pred             ---cHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCC-----------------------------cEEE
Confidence               234567788999999999999965 5677888999999999976                             2234


Q ss_pred             eeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         269 ITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ..+.+|+..|.|.+|+|.  ..+++|+.||.|++||++.. ..+.++.+..+|..+.+-|.|..+++++ .+.|+|||+.
T Consensus       147 ~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~  225 (487)
T KOG0310|consen  147 AELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAG-GNSVKVWDLT  225 (487)
T ss_pred             EEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcC-CCeEEEEEec
Confidence            578899999999999964  35999999999999999987 7888899999999999999999999987 5679999997


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++.  ..+..+..|...|+|+++.. ++..|+|+|-|+.|++||+
T Consensus       226 ~G~--qll~~~~~H~KtVTcL~l~s-~~~rLlS~sLD~~VKVfd~  267 (487)
T KOG0310|consen  226 TGG--QLLTSMFNHNKTVTCLRLAS-DSTRLLSGSLDRHVKVFDT  267 (487)
T ss_pred             CCc--eehhhhhcccceEEEEEeec-CCceEeecccccceEEEEc
Confidence            643  24445555999999999998 5578999999999999985

>KOG0308|consensus

Probab=99.97  E-value=1.3e-29  Score=217.98  Aligned_cols=250  Identities=21%  Similarity=0.338  Sum_probs=204.9

Q ss_pred             CCCCcEE---EEEec---CCEEEEEECCCeEEEEcCC---C----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC
Q psy2107         114 LHDDWVS---AIDFH---NDWILTGCYDHSVHIWTRR---G----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ  180 (391)
Q Consensus       114 ~h~~~V~---~~~~~---~~~l~t~~~dg~i~iwd~~---~----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg  180 (391)
                      .|...|.   ++..+   +++|+||+.||.|++|+..   +    .....+..|...|..+..   ..+++.|++++.|-
T Consensus        19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL---~~~~~tlIS~SsDt   95 (735)
T KOG0308|consen   19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIIL---CGNGKTLISASSDT   95 (735)
T ss_pred             hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHh---hcCCCceEEecCCc
Confidence            3555555   44444   6689999999999999872   2    135577899999999998   55777899999999


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEE-cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTV-SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      +|++|+...  ....+..++..|.+.|.|+++ .++..++|+||-|+.|.+||++++.......                
T Consensus        96 TVK~W~~~~--~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s----------------  157 (735)
T KOG0308|consen   96 TVKVWNAHK--DNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVAS----------------  157 (735)
T ss_pred             eEEEeeccc--CcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhh----------------
Confidence            999999542  224677888999999999999 8888999999999999999998763310000                


Q ss_pred             ccCCCCCceeeec-CccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCC
Q psy2107         260 SSASSRTPLITLK-GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       260 ~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~d  336 (391)
                         ........+. ++..+|.+++.++.+. +++|+..+.+++||.++++.+..+++|. .|.++..+++|+.+++++.|
T Consensus       158 ---~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSD  234 (735)
T KOG0308|consen  158 ---FNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSD  234 (735)
T ss_pred             ---ccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCC
Confidence               0011222333 8899999999997665 7888999999999999999999999887 89999999999999999999


Q ss_pred             CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+|++||+....   ++.++..|...|+++..+| .=..+.+|+.||.|..=|||
T Consensus       235 gtIrlWdLgqQr---Cl~T~~vH~e~VWaL~~~~-sf~~vYsG~rd~~i~~Tdl~  285 (735)
T KOG0308|consen  235 GTIRLWDLGQQR---CLATYIVHKEGVWALQSSP-SFTHVYSGGRDGNIYRTDLR  285 (735)
T ss_pred             ceEEeeeccccc---eeeeEEeccCceEEEeeCC-CcceEEecCCCCcEEecccC
Confidence            999999997655   8889999999999999998 66789999999999987775

>KOG0301|consensus

Probab=99.97  E-value=1.2e-28  Score=213.59  Aligned_cols=250  Identities=18%  Similarity=0.311  Sum_probs=209.3

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEE-EEec---CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEe
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSA-IDFH---NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLY  165 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-~~~~---~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~  165 (391)
                      +.++++++|......-.......+|.+.|.+ ++|.   +.++++|+.|++|.+|.. .......+.+|...|.|++.  
T Consensus        32 sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~--  109 (745)
T KOG0301|consen   32 SRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSI--  109 (745)
T ss_pred             CCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeec--
Confidence            4577888887654444334556678888877 7775   347999999999999999 56788899999999999996  


Q ss_pred             cCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         166 NDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       166 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                       ..++. +++||.|.++++|..      .++...+.+|...|.+++.-|++ .+++|+.|+.|++|.-.+          
T Consensus       110 -~~~~~-~iSgSWD~TakvW~~------~~l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIklWk~~~----------  170 (745)
T KOG0301|consen  110 -GEDGT-LISGSWDSTAKVWRI------GELVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKLWKGGT----------  170 (745)
T ss_pred             -CCcCc-eEecccccceEEecc------hhhhcccCCcchheeeeeecCCC-cEEeccCcceeeeccCCc----------
Confidence             44444 999999999999973      35566689999999999999988 799999999999998743          


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEEC
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYS  324 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~  324 (391)
                                           .+.++.+|.+.|+.+++-+++.|++++.||.|++|++ +|.++.++.+|. -+.+++..
T Consensus       171 ---------------------~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~  228 (745)
T KOG0301|consen  171 ---------------------LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMA  228 (745)
T ss_pred             ---------------------hhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEec
Confidence                                 7889999999999999999999999999999999999 778888887776 78899988


Q ss_pred             CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       325 p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++..+++++.|++++||+..  .   +.+.+.-....|+++.+-+ ++. +++|+.||.||||-.
T Consensus       229 ~~~~~Ivs~gEDrtlriW~~~--e---~~q~I~lPttsiWsa~~L~-NgD-Ivvg~SDG~VrVfT~  287 (745)
T KOG0301|consen  229 LSDGLIVSTGEDRTLRIWKKD--E---CVQVITLPTTSIWSAKVLL-NGD-IVVGGSDGRVRVFTV  287 (745)
T ss_pred             CCCCeEEEecCCceEEEeecC--c---eEEEEecCccceEEEEEee-CCC-EEEeccCceEEEEEe
Confidence            889999999999999999964  2   5556654444799999988 555 888999999999964

>KOG0310|consensus

Probab=99.97  E-value=1.2e-28  Score=205.38  Aligned_cols=236  Identities=19%  Similarity=0.309  Sum_probs=193.0

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      +....+.|.++.|.  |+++|+|...|.|+|+|.+.. .+..+.+|..+|..+.|+|.  ++..+++|+.|+.+++||+.
T Consensus        64 ~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~--d~t~l~s~sDd~v~k~~d~s  141 (487)
T KOG0310|consen   64 FSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQ--DNTMLVSGSDDKVVKYWDLS  141 (487)
T ss_pred             HHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEeccc--CCeEEEecCCCceEEEEEcC
Confidence            34467789999996  889999999999999997543 45578899999999999765  67799999999999999965


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                        +  ......+.+|++.|.|.+|+|. +.++++||.||.|++||.+...                            ..
T Consensus       142 --~--a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~----------------------------~~  189 (487)
T KOG0310|consen  142 --T--AYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT----------------------------SR  189 (487)
T ss_pred             --C--cEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC----------------------------ce
Confidence              2  2346688999999999999995 4578999999999999998621                            23


Q ss_pred             eeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCce-eEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         268 LITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM-KSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      +..+ .|..+|..+.+-|++.+++......+++||+.+|.. +..+. +++.|+|+.+..++..|++|+-|+.+++||+.
T Consensus       190 v~el-nhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t  268 (487)
T KOG0310|consen  190 VVEL-NHGCPVESVLALPSGSLIASAGGNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTT  268 (487)
T ss_pred             eEEe-cCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEcc
Confidence            4444 589999999999887766666678999999996654 44443 67799999999999999999999999999965


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      +.+   .+..+. -.++|.+++.+| ++..++.|..||.+.+
T Consensus       269 ~~K---vv~s~~-~~~pvLsiavs~-dd~t~viGmsnGlv~~  305 (487)
T KOG0310|consen  269 NYK---VVHSWK-YPGPVLSIAVSP-DDQTVVIGMSNGLVSI  305 (487)
T ss_pred             ceE---EEEeee-cccceeeEEecC-CCceEEEecccceeee
Confidence            544   665554 678999999999 5567899999998765

>KOG0772|consensus

Probab=99.97  E-value=5.4e-29  Score=208.77  Aligned_cols=253  Identities=19%  Similarity=0.323  Sum_probs=191.6

Q ss_pred             cCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc----------------------------eEE----
Q psy2107         104 TPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE----------------------------HKL----  149 (391)
Q Consensus       104 ~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~----------------------------~~~----  149 (391)
                      .+.....++.+|+..|+++++.  |-.|++|+.|-+|++||+.+.                            .+.    
T Consensus       155 IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg  234 (641)
T KOG0772|consen  155 IPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG  234 (641)
T ss_pred             CCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEec
Confidence            4444556778899999999997  779999999999999997431                            000    


Q ss_pred             ----------------------------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         150 ----------------------------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       150 ----------------------------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                                                  ..++|...++|.+|+|.  +...+++++.||++|+||++......+.+....
T Consensus       235 ~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~--~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~  312 (641)
T KOG0772|consen  235 SAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPD--NKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP  312 (641)
T ss_pred             CcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccC--cccceEEecCCCcEEEEecCCchhheeEEeecc
Confidence                                        01478899999999876  455799999999999999764433333322211


Q ss_pred             --cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC--c
Q psy2107         202 --GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE--A  277 (391)
Q Consensus       202 --~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  277 (391)
                        +..-+++.++|++++++||+|+.||.|.+|+......                          +.....-..|..  .
T Consensus       313 ~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v--------------------------~p~~~vk~AH~~g~~  366 (641)
T KOG0772|consen  313 AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTV--------------------------RPVMKVKDAHLPGQD  366 (641)
T ss_pred             CCCcccCceeeecCCCcchhhhcccCCceeeeecCCccc--------------------------ccceEeeeccCCCCc
Confidence              2344789999999999999999999999999854221                          223334456766  8


Q ss_pred             ccEEEec-cCCeEEEEECCCeEEEEecccCc-eeEEEE---CCeeeEEEEECCCCCEEEEeeC------CCcEEEEcCCC
Q psy2107         278 ISAVQWT-AVDEIITSSWDHTLKIWDAELGG-MKSEIV---GNKSFFDVHYSPLSKLVITASA------DKQIRLYDPKV  346 (391)
Q Consensus       278 v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~---~~~~i~~~~~~p~~~~l~~g~~------dg~i~iwd~~~  346 (391)
                      |+|+.|+ ++++|++-+.|+++++||+++.+ ++....   ...+-+.++|||+.++|++|+.      .|.+.+||..+
T Consensus       367 Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t  446 (641)
T KOG0772|consen  367 ITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMT  446 (641)
T ss_pred             eeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccc
Confidence            9999999 45569999999999999999754 333332   2336788999999999999853      47899999877


Q ss_pred             CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .+   .+..+.-....|..+.|+| .-+.+..|+.||+++||
T Consensus       447 ~d---~v~ki~i~~aSvv~~~Whp-kLNQi~~gsgdG~~~vy  484 (641)
T KOG0772|consen  447 LD---TVYKIDISTASVVRCLWHP-KLNQIFAGSGDGTAHVY  484 (641)
T ss_pred             ee---eEEEecCCCceEEEEeecc-hhhheeeecCCCceEEE
Confidence            66   5666666677899999999 55557777789999886

>KOG0289|consensus

Probab=99.97  E-value=6.3e-28  Score=198.25  Aligned_cols=244  Identities=19%  Similarity=0.289  Sum_probs=204.0

Q ss_pred             CCcccCCCCcEEEEEecC--CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFHN--DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+.||...|+.+.|++  +.+++++.|-.|+||.. ..........|.++|+.+..   ++.+.||++++.||+..+.
T Consensus       254 l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~~~~~~~h~~~V~~ls~---h~tgeYllsAs~d~~w~Fs  330 (506)
T KOG0289|consen  254 LATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSEPTSSRPHEEPVTGLSL---HPTGEYLLSASNDGTWAFS  330 (506)
T ss_pred             hhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccCccccccccccceeeee---ccCCcEEEEecCCceEEEE
Confidence            456678999999999994  48999999999999998 44455567789999999999   6789999999999999999


Q ss_pred             eecCCCCceeEEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         186 EWKVESNSIECIHVCR--GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      |++.    ...+....  ...-.+++.+|+|||.+|.+|..||.|++||+..                            
T Consensus       331 d~~~----g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks----------------------------  378 (506)
T KOG0289|consen  331 DISS----GSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKS----------------------------  378 (506)
T ss_pred             EccC----CcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCC----------------------------
Confidence            9762    23333322  2234689999999999999999999999999976                            


Q ss_pred             CCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                       ...+..+.+|.++|..++|+.+|+ |++++.|+.|++||++..+...++....  ++.++.|.+.|.+|+.++.|=.|+
T Consensus       379 -~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy  457 (506)
T KOG0289|consen  379 -QTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVY  457 (506)
T ss_pred             -ccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEE
Confidence             335678899999999999998777 8889999999999999988888887655  699999999999999998887888


Q ss_pred             EEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++-.+. ....+..+..|.+..+++.|.. ..++++++|.|..++++-+
T Consensus       458 ~~~k~~k-~W~~~~~~~~~sg~st~v~Fg~-~aq~l~s~smd~~l~~~a~  505 (506)
T KOG0289|consen  458 ICKKKTK-SWTEIKELADHSGLSTGVRFGE-HAQYLASTSMDAILRLYAL  505 (506)
T ss_pred             EEecccc-cceeeehhhhcccccceeeecc-cceEEeeccchhheEEeec
Confidence            8775443 3446667788999999999987 6678999999999998865

>PTZ00420 coronin; Provisional

Probab=99.97  E-value=2.8e-27  Score=212.65  Aligned_cols=239  Identities=12%  Similarity=0.185  Sum_probs=175.4

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC-c--------eEEeccCCCCCee
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG-E--------HKLNIPGHGGPVK  159 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~-~--------~~~~~~~~~~~v~  159 (391)
                      ..+.+.+|...+.  +....+.+|.+.|.+++|+   +++|++|+.||+|+|||+.. .        ....+.+|...|.
T Consensus        52 ~~gvI~L~~~~r~--~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~  129 (568)
T PTZ00420         52 LIGAIRLENQMRK--PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS  129 (568)
T ss_pred             ceeEEEeeecCCC--ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence            4556677755432  2345567899999999998   45999999999999999842 1        2335678999999


Q ss_pred             EEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         160 GVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       160 ~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                      +++|   +|++. ++++++.|++|++||++..    ..+..+. |...|.+++|+|+|.+|++++.|+.|++||++++  
T Consensus       130 sVaf---~P~g~~iLaSgS~DgtIrIWDl~tg----~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg--  199 (568)
T PTZ00420        130 IIDW---NPMNYYIMCSSGFDSFVNIWDIENE----KRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ--  199 (568)
T ss_pred             EEEE---CCCCCeEEEEEeCCCeEEEEECCCC----cEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCC--
Confidence            9999   44554 5679999999999997522    2334444 5678999999999999999999999999999873  


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE-----ec-cCCeEEEEECCC----eEEEEeccc-Cc
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ-----WT-AVDEIITSSWDH----TLKIWDAEL-GG  307 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~-~~~~l~s~~~dg----~i~iwd~~~-~~  307 (391)
                                                 ..+..+.+|.+.+.+..     |+ .++.+++++.|+    .|+|||+++ +.
T Consensus       200 ---------------------------~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~  252 (568)
T PTZ00420        200 ---------------------------EIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTS  252 (568)
T ss_pred             ---------------------------cEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCC
Confidence                                       35567788887654332     33 345788888774    799999995 56


Q ss_pred             eeEEEECCee---eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         308 MKSEIVGNKS---FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       308 ~~~~~~~~~~---i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      ++..+..+..   +...-..++|.++++|+.|+.|++|++..+. ...+..+. +..++.+++|.|.
T Consensus       253 pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~-~~~l~~~~-s~~p~~g~~f~Pk  317 (568)
T PTZ00420        253 ALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS-IRKVNEYK-SCSPFRSFGFLPK  317 (568)
T ss_pred             ceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc-EEeecccc-cCCCccceEEccc
Confidence            6666554432   2223334558899999999999999997653 12222333 6678899999994

>KOG0641|consensus

Probab=99.97  E-value=6.7e-27  Score=176.63  Aligned_cols=280  Identities=21%  Similarity=0.307  Sum_probs=208.7

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCC----------C-C--CCcccCCCCcEEEEEec--CCEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPT----------P-S--PLDCILHDDWVSAIDFH--NDWIL  130 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~-~--~~~~~~h~~~V~~~~~~--~~~l~  130 (391)
                      ...+|.++|.+-+.          .+..+++++...+....          | .  ...-..|++.|.|.+|+  |++++
T Consensus        36 rav~fhp~g~lyav----------gsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~gelia  105 (350)
T KOG0641|consen   36 RAVAFHPAGGLYAV----------GSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIA  105 (350)
T ss_pred             eeEEecCCCceEEe----------ccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEE
Confidence            44788999877664          23445555543331111          1 1  12334599999999998  88999


Q ss_pred             EEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCe-EEEEEe-CCCcEEEEeecCCCCceeEEEEEec
Q psy2107         131 TGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVS-TDQTAMIWEWKVESNSIECIHVCRG  202 (391)
Q Consensus       131 t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~  202 (391)
                      +|+.|.+|++.-.+.      ..-..+.-|.+.|..++|......+. +|++++ .|..|.+-|    -+.....+.+.+
T Consensus       106 tgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~td----c~~g~~~~a~sg  181 (350)
T KOG0641|consen  106 TGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITD----CGRGQGFHALSG  181 (350)
T ss_pred             ecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEee----cCCCCcceeecC
Confidence            999999999986532      22335667999999999987554444 455443 244454444    345677888999


Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec----C---cc
Q psy2107         203 HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK----G---HK  275 (391)
Q Consensus       203 ~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~  275 (391)
                      |.+.|.++ ++-++-++++|+.|.+|++||++-...                             +.++.    +   ..
T Consensus       182 htghilal-yswn~~m~~sgsqdktirfwdlrv~~~-----------------------------v~~l~~~~~~~gles  231 (350)
T KOG0641|consen  182 HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSC-----------------------------VNTLDNDFHDGGLES  231 (350)
T ss_pred             CcccEEEE-EEecCcEEEccCCCceEEEEeeeccce-----------------------------eeeccCcccCCCccc
Confidence            99999887 344678999999999999999976332                             22221    1   24


Q ss_pred             CcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-cceE
Q psy2107         276 EAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE-GAIV  352 (391)
Q Consensus       276 ~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-~~~~  352 (391)
                      +.|.+++..|.++ |++|-.|....+||++-++.++.+..|. .|.|+.|+|...|+++++.|..|++-|+...- ....
T Consensus       232 savaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~  311 (350)
T KOG0641|consen  232 SAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELP  311 (350)
T ss_pred             ceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCc
Confidence            6789999998776 6777789999999999999999998776 89999999999999999999999999986421 2234


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.....|...+..+.|+| ...-+++.+.|.++.+|-+
T Consensus       312 ~~vv~ehkdk~i~~rwh~-~d~sfisssadkt~tlwa~  348 (350)
T KOG0641|consen  312 IMVVAEHKDKAIQCRWHP-QDFSFISSSADKTATLWAL  348 (350)
T ss_pred             eEEEEeccCceEEEEecC-ccceeeeccCcceEEEecc
Confidence            445667999999999999 5567899999999999976

>KOG1446|consensus

Probab=99.97  E-value=7.7e-27  Score=184.85  Aligned_cols=261  Identities=20%  Similarity=0.326  Sum_probs=199.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC--CCcEEEEeecC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST--DQTAMIWEWKV  189 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~--dg~v~iwd~~~  189 (391)
                      -.+.|+++.|+  |..+++++.|.+++|||. ++.++.++..+...+..++|..   ....++.++.  |.+|+..++. 
T Consensus        13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth---~~~~~i~sStk~d~tIryLsl~-   88 (311)
T KOG1446|consen   13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTH---HSNTVIHSSTKEDDTIRYLSLH-   88 (311)
T ss_pred             CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEec---CCceEEEccCCCCCceEEEEee-
Confidence            46789999998  889999999999999998 7788888888888899999953   3344555555  8899999865 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc------------c
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK------------K  257 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~------------~  257 (391)
                         ..+.++.+.||...|.+++.+|-+..+++++.|++|++||++..+..........+..+-+...            .
T Consensus        89 ---dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~Ik  165 (311)
T KOG1446|consen   89 ---DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIK  165 (311)
T ss_pred             ---cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEE
Confidence               4478999999999999999999999999999999999999997766544333332222222111            1


Q ss_pred             ccccC-CCCCceeeec---CccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCee----eEEEEECCCCC
Q psy2107         258 EYSSA-SSRTPLITLK---GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKS----FFDVHYSPLSK  328 (391)
Q Consensus       258 ~~~~~-~~~~~~~~~~---~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----i~~~~~~p~~~  328 (391)
                      .+... -...|..++.   +.....+.+.|+++|. ++.++..+.+++.|.-+|..+.++..+..    -...+|+|+++
T Consensus       166 LyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~  245 (311)
T KOG1446|consen  166 LYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSK  245 (311)
T ss_pred             EEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCc
Confidence            11111 1123333333   3356788999997665 88888899999999999999988876542    25789999999


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ++++|+.||+|++|+++++.   .+..+.+ +.+++.++.|+| .-.+++|+  +..+-+|
T Consensus       246 Fvl~gs~dg~i~vw~~~tg~---~v~~~~~~~~~~~~~~~fnP-~~~mf~sa--~s~l~fw  300 (311)
T KOG1446|consen  246 FVLSGSDDGTIHVWNLETGK---KVAVLRGPNGGPVSCVRFNP-RYAMFVSA--SSNLVFW  300 (311)
T ss_pred             EEEEecCCCcEEEEEcCCCc---EeeEecCCCCCCccccccCC-ceeeeeec--CceEEEE
Confidence            99999999999999998876   6667776 789999999999 54455555  4577777

>KOG0641|consensus

Probab=99.96  E-value=6.4e-27  Score=176.76  Aligned_cols=244  Identities=20%  Similarity=0.299  Sum_probs=196.4

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC------CC----------ceEEeccCCCCCeeEEEEEecCCCCeEE
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR------RG----------EHKLNIPGHGGPVKGVAWLYNDGKDAAF  173 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~------~~----------~~~~~~~~~~~~v~~l~~~~~~~~~~~l  173 (391)
                      .+.-+..|.+++|+  |.+.++|+...+++|--.      ..          -....-+.|.+.|.|.+|   ++.+.++
T Consensus        28 ~l~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~w---s~~geli  104 (350)
T KOG0641|consen   28 ILEDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAW---SPCGELI  104 (350)
T ss_pred             EecchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEe---cCccCeE
Confidence            34456689999998  779999999999998742      11          012234578999999999   7889999


Q ss_pred             EEEeCCCcEEEEeecCCCCc-eeEEEEEecCCCCeEEEEEcC----CCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         174 ISVSTDQTAMIWEWKVESNS-IECIHVCRGHERGLETVTVSE----SRQQFATGG-WDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       174 ~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~----~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      ++|+.|.+|++.-++.++.+ ...-..+.-|.+.|..++|-.    .+.+|++++ .|..|++-|...            
T Consensus       105 atgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~------------  172 (350)
T KOG0641|consen  105 ATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGR------------  172 (350)
T ss_pred             EecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCC------------
Confidence            99999999999876543322 122356778999999999954    345677665 456677667654            


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC--------CeeeE
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG--------NKSFF  319 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~i~  319 (391)
                                       ......+.+|.+.|.++---.+-.+++|+.|.+|++||++-..++.++..        .+.|.
T Consensus       173 -----------------g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessava  235 (350)
T KOG0641|consen  173 -----------------GQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVA  235 (350)
T ss_pred             -----------------CCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeE
Confidence                             45778899999998877433556799999999999999998888877642        13789


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +++..|.|++|++|-.|.+..+||++.+.   +++.+..|...|.++.|+| +..++++|+.|..|++=|++
T Consensus       236 av~vdpsgrll~sg~~dssc~lydirg~r---~iq~f~phsadir~vrfsp-~a~yllt~syd~~ikltdlq  303 (350)
T KOG0641|consen  236 AVAVDPSGRLLASGHADSSCMLYDIRGGR---MIQRFHPHSADIRCVRFSP-GAHYLLTCSYDMKIKLTDLQ  303 (350)
T ss_pred             EEEECCCcceeeeccCCCceEEEEeeCCc---eeeeeCCCccceeEEEeCC-CceEEEEecccceEEEeecc
Confidence            99999999999999999999999999877   8889999999999999999 88999999999999998874

>KOG0306|consensus

Probab=99.96  E-value=4.2e-28  Score=212.02  Aligned_cols=250  Identities=22%  Similarity=0.346  Sum_probs=202.8

Q ss_pred             CcccCCCCcEEEEEecCC-EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         110 LDCILHDDWVSAIDFHND-WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~~-~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      ....||+..|.+++++.+ .++.++..+.++||+.. .+++.++..  +.+.+..|.|   .++++++|...|.+.+||+
T Consensus       367 i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRTi~~--~y~l~~~Fvp---gd~~Iv~G~k~Gel~vfdl  441 (888)
T KOG0306|consen  367 IEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRTITC--GYILASKFVP---GDRYIVLGTKNGELQVFDL  441 (888)
T ss_pred             eeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEEecc--ccEEEEEecC---CCceEEEeccCCceEEEEe
Confidence            566789999999999954 44445556899999995 677777653  3888999955   5779999999999999997


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      .    ....+...+.|.+.|.+++.+|+++.+++||.|.+|++||..-.....          ....+.      .....
T Consensus       442 a----S~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~----------gt~~k~------lsl~~  501 (888)
T KOG0306|consen  442 A----SASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVP----------GTQKKV------LSLKH  501 (888)
T ss_pred             e----hhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccC----------ccccee------eeecc
Confidence            5    334566777999999999999999999999999999999985322100          000000      00001


Q ss_pred             eeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         268 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ..++ .-...|.|+.++|++. |+++--|.++++|-+.+-+....+.+|. ||.|+.++||+++++|||.|..|++|-+.
T Consensus       502 ~rtL-el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd  580 (888)
T KOG0306|consen  502 TRTL-ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD  580 (888)
T ss_pred             ceEE-eccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence            1122 2356799999998776 6667789999999999999999999998 99999999999999999999999999998


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      -+.   +...+.+|...|.++.|.| ...++.|||.|+.|+-||
T Consensus       581 FGD---CHKS~fAHdDSvm~V~F~P-~~~~FFt~gKD~kvKqWD  620 (888)
T KOG0306|consen  581 FGD---CHKSFFAHDDSVMSVQFLP-KTHLFFTCGKDGKVKQWD  620 (888)
T ss_pred             cch---hhhhhhcccCceeEEEEcc-cceeEEEecCcceEEeec
Confidence            888   7788899999999999999 778899999999999997

>KOG0268|consensus

Probab=99.96  E-value=3.6e-29  Score=201.07  Aligned_cols=240  Identities=22%  Similarity=0.351  Sum_probs=200.9

Q ss_pred             CCCCcccCCCCcEEEEEecCC---EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         107 PSPLDCILHDDWVSAIDFHND---WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       107 ~~~~~~~~h~~~V~~~~~~~~---~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      |..-.+.||.+.|.|++-+++   .+++|+.||.|+|||+ +..+...+..|.+.|..|++   +.  ..+++++.|.+|
T Consensus        57 PFv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v---~~--~~~~tvgdDKtv  131 (433)
T KOG0268|consen   57 PFVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICV---TQ--TSFFTVGDDKTV  131 (433)
T ss_pred             cchhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEe---cc--cceEEecCCcce
Confidence            334556789999999999854   7999999999999999 45667789999999999999   33  679999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +.|.++.     .+++++.+ ...+..+.-+..+..++++|.+  |.|||..-                           
T Consensus       132 K~wk~~~-----~p~~tilg-~s~~~gIdh~~~~~~FaTcGe~--i~IWD~~R---------------------------  176 (433)
T KOG0268|consen  132 KQWKIDG-----PPLHTILG-KSVYLGIDHHRKNSVFATCGEQ--IDIWDEQR---------------------------  176 (433)
T ss_pred             eeeeccC-----Ccceeeec-cccccccccccccccccccCce--eeeccccc---------------------------
Confidence            9998653     25566654 4567777777777889998864  99999864                           


Q ss_pred             CCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                        ..|+..+.-....|.++.|+|.  ..|++|+.|+.|.+||++++.++........-+.++|+|.+-.+++|+.|..++
T Consensus       177 --~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY  254 (433)
T KOG0268|consen  177 --DNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLY  254 (433)
T ss_pred             --CCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccce
Confidence              4577778777888999999964  447888899999999999999999888888888999999888899999999999


Q ss_pred             EEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .||++....  ++....+|.+.|.+++|+|. ++-++|||.|.+|+||.++
T Consensus       255 ~~DmR~l~~--p~~v~~dhvsAV~dVdfspt-G~EfvsgsyDksIRIf~~~  302 (433)
T KOG0268|consen  255 TYDMRNLSR--PLNVHKDHVSAVMDVDFSPT-GQEFVSGSYDKSIRIFPVN  302 (433)
T ss_pred             ehhhhhhcc--cchhhcccceeEEEeccCCC-cchhccccccceEEEeecC
Confidence            999987543  45677899999999999995 4569999999999999764

>KOG0293|consensus

Probab=99.96  E-value=4.1e-28  Score=198.21  Aligned_cols=242  Identities=18%  Similarity=0.290  Sum_probs=197.3

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC--C--ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR--G--EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~--~--~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      ..+..|++.|.-+.|+  |++||+++.|.+..||.+.  .  +...++.+|..+|..+.|   +|+.+++++|+.|..+.
T Consensus       218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~w---SPDdryLlaCg~~e~~~  294 (519)
T KOG0293|consen  218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMW---SPDDRYLLACGFDEVLS  294 (519)
T ss_pred             hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEE---CCCCCeEEecCchHhee
Confidence            3445699999999998  8899999999999999872  2  345688899999999999   77899999999999999


Q ss_pred             EEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +||..+    +.+.+.+. ++...+.+++|.|||..+++|+.|+.|..||++...                         
T Consensus       295 lwDv~t----gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-------------------------  345 (519)
T KOG0293|consen  295 LWDVDT----GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-------------------------  345 (519)
T ss_pred             eccCCc----chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-------------------------
Confidence            999652    23333332 356789999999999999999999999999997522                         


Q ss_pred             CCCCceeeecCc-cCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         263 SSRTPLITLKGH-KEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       263 ~~~~~~~~~~~~-~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                           ...+.+- ...|.+++..+++ .+++.+.|..|++++..+......+..+.+|+++++|.+++++++.-.+..++
T Consensus       346 -----~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~LvnL~~qei~  420 (519)
T KOG0293|consen  346 -----LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVNLQDQEIH  420 (519)
T ss_pred             -----hhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEEcccCeeE
Confidence                 2222222 2458899999554 58888999999999999887777788889999999999999999999999999


Q ss_pred             EEcCCCCCcceEEEEeccccC--cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKE--WVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +||+....   ++..+.||+.  .+..-+|--.+..+++|||.|+.|+||+.+
T Consensus       421 LWDl~e~~---lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~  470 (519)
T KOG0293|consen  421 LWDLEENK---LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRI  470 (519)
T ss_pred             Eeecchhh---HHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEcc
Confidence            99998544   7778888875  345556766456799999999999999853

>KOG0646|consensus

Probab=99.96  E-value=5.9e-28  Score=200.20  Aligned_cols=237  Identities=21%  Similarity=0.302  Sum_probs=196.0

Q ss_pred             CCEEEEEEC-CCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         126 NDWILTGCY-DHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       126 ~~~l~t~~~-dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      +.+++++.. -..|.+|.+. .........-.++|.+++-   ++.|.+++.|+..|.+++|.+.    .+..+..+.+|
T Consensus        50 ~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s---~n~G~~l~ag~i~g~lYlWels----sG~LL~v~~aH  122 (476)
T KOG0646|consen   50 NEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALAS---SNLGYFLLAGTISGNLYLWELS----SGILLNVLSAH  122 (476)
T ss_pred             hhheeeecccCccccccccCchhhhhhhcccccceeeeec---CCCceEEEeecccCcEEEEEec----cccHHHHHHhh
Confidence            456666654 3578999984 3333345556788999998   7789999999999999999975    45677778899


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW  283 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  283 (391)
                      -..|+|+.|+.|+.+|++||.||.|.+|++..--...                    ......++..+..|.-+|+.+..
T Consensus       123 YQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~--------------------~~~~~~p~~~f~~HtlsITDl~i  182 (476)
T KOG0646|consen  123 YQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSAD--------------------NDHSVKPLHIFSDHTLSITDLQI  182 (476)
T ss_pred             ccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccc--------------------cCCCccceeeeccCcceeEEEEe
Confidence            9999999999999999999999999999985311100                    01135688899999999999998


Q ss_pred             ccC---CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------
Q psy2107         284 TAV---DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----------  349 (391)
Q Consensus       284 ~~~---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----------  349 (391)
                      .++   .+++++|.|.++++||+..+.++.++..+.++.+++.+|.++.+.+|+.+|.|.+.++....+           
T Consensus       183 g~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~  262 (476)
T KOG0646|consen  183 GSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRH  262 (476)
T ss_pred             cCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccc
Confidence            844   579999999999999999999999999999999999999999999999999999988754331           


Q ss_pred             --ceEEEEeccccC--cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         350 --AIVKSTFSSHKE--WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 --~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        ......+.+|.+  .|+|++.+- ++.+|++|+.||.|+|||+
T Consensus       263 ~~~t~~~~~~Gh~~~~~ITcLais~-DgtlLlSGd~dg~VcvWdi  306 (476)
T KOG0646|consen  263 EENTQINVLVGHENESAITCLAIST-DGTLLLSGDEDGKVCVWDI  306 (476)
T ss_pred             cccceeeeeccccCCcceeEEEEec-CccEEEeeCCCCCEEEEec
Confidence              123456778988  999999999 7789999999999999997

>KOG0299|consensus

Probab=99.96  E-value=9.3e-28  Score=198.66  Aligned_cols=238  Identities=17%  Similarity=0.285  Sum_probs=197.8

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      .+|...|.+++.+  +++||+|+.|..|.||+. +.+.+..+.+|.+.|.+++|   ......+++++.|++|++|+++ 
T Consensus       199 ~~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~f---r~gt~~lys~s~Drsvkvw~~~-  274 (479)
T KOG0299|consen  199 KGHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAF---RKGTSELYSASADRSVKVWSID-  274 (479)
T ss_pred             ccccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeee---ecCccceeeeecCCceEEEehh-
Confidence            4899999999998  779999999999999999 56677788999999999999   4455679999999999999965 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                         ....+.++.+|.+.|.+|....-++.+-+|+.|+++++|++..                              ....
T Consensus       275 ---~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e------------------------------esql  321 (479)
T KOG0299|consen  275 ---QLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE------------------------------ESQL  321 (479)
T ss_pred             ---HhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc------------------------------ccee
Confidence               5566788899999999999988888888888999999999943                              1234


Q ss_pred             eecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-------------eeeEEEEECCCCCEEEEeeCC
Q psy2107         270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------------KSFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~i~~~~~~p~~~~l~~g~~d  336 (391)
                      .+.+|.+.+.|++|-++..+++|+.+|.|.+|++...+++.+....             ..|++++..|...++++|+.+
T Consensus       322 ifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~  401 (479)
T KOG0299|consen  322 IFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWS  401 (479)
T ss_pred             eeeCCCCCeeeEEEecccceeeccCCceEEEeeecccCceeEeeccccccCCccccccccceeeeEecccCceEEecCCC
Confidence            5668889999999999999999999999999999998888776521             168899999999999999999


Q ss_pred             CcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         337 KQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       337 g~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      |.|++|-+..+-. ..++..+. -.+.|++++|++++..+++..+....+--|
T Consensus       402 G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagiGkEhRlGRW  453 (479)
T KOG0299|consen  402 GCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGIGKEHRLGRW  453 (479)
T ss_pred             CceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEeccccccccee
Confidence            9999999876522 22444444 667899999999666577777766554433

>KOG1036|consensus

Probab=99.96  E-value=4.6e-27  Score=185.28  Aligned_cols=235  Identities=16%  Similarity=0.239  Sum_probs=183.5

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      .+.|+++.|+  ++.|++++.||++++|+.....+.....|..++.+++|.+    ...+++|+.||.|+.+|++...  
T Consensus        13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d----~~~~~~G~~dg~vr~~Dln~~~--   86 (323)
T KOG1036|consen   13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFAD----ESTIVTGGLDGQVRRYDLNTGN--   86 (323)
T ss_pred             hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccC----CceEEEeccCceEEEEEecCCc--
Confidence            4689999998  5578888899999999997666666667999999999943    4579999999999999976433  


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                         ...+..|..+|.||.+++....+++||.|++|++||.+...                             ....+. 
T Consensus        87 ---~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~-----------------------------~~~~~d-  133 (323)
T KOG1036|consen   87 ---EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKV-----------------------------VVGTFD-  133 (323)
T ss_pred             ---ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccc-----------------------------cccccc-
Confidence               23456799999999999988899999999999999998522                             222222 


Q ss_pred             ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-c
Q psy2107         274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE-G  349 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-~  349 (391)
                      ....|.++... ++.|+.|+.|..+.+||+++........   ....+.|+++.|++.-.++++-||.|.+=.+...+ .
T Consensus       134 ~~kkVy~~~v~-g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~  212 (323)
T KOG1036|consen  134 QGKKVYCMDVS-GNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEA  212 (323)
T ss_pred             cCceEEEEecc-CCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHH
Confidence            23367777655 4789999999999999999876554332   33489999999998888899999999886665441 1


Q ss_pred             ceEEEEecccc---------CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         350 AIVKSTFSSHK---------EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       350 ~~~~~~~~~h~---------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ......++.|.         .+|++|+|+| -...|+|||.||.|.+||+.
T Consensus       213 ~skkyaFkCHr~~~~~~~~~yPVNai~Fhp-~~~tfaTgGsDG~V~~Wd~~  262 (323)
T KOG1036|consen  213 QSKKYAFKCHRLSEKDTEIIYPVNAIAFHP-IHGTFATGGSDGIVNIWDLF  262 (323)
T ss_pred             hhhceeEEeeecccCCceEEEEeceeEecc-ccceEEecCCCceEEEccCc
Confidence            12333455564         3799999999 45679999999999999973

>KOG0300|consensus

Probab=99.96  E-value=1.1e-27  Score=189.70  Aligned_cols=264  Identities=22%  Similarity=0.398  Sum_probs=220.4

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-------C--------C-------
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-------R--------G-------  145 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-------~--------~-------  145 (391)
                      .+.+.+..+|..+...  ...++.||.+.|+|+.|+  +.++++++.|++..||..       .        +       
T Consensus       166 ASADhTA~iWs~Esg~--CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~s  243 (481)
T KOG0300|consen  166 ASADHTARIWSLESGA--CLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHS  243 (481)
T ss_pred             cccccceeEEeecccc--ceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcc
Confidence            3567778888876543  356778999999999998  679999999999999951       1        0       


Q ss_pred             -------------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         146 -------------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       146 -------------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                                         -.+..+.+|.+.|.+..|+   ..+..+++++.|.+..+||++    ....+..+.+|...
T Consensus       244 De~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL---~gg~Q~vTaSWDRTAnlwDVE----tge~v~~LtGHd~E  316 (481)
T KOG0300|consen  244 DEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWL---AGGQQMVTASWDRTANLWDVE----TGEVVNILTGHDSE  316 (481)
T ss_pred             cccccccccccccCCceeeeeeeeeeccccceEehhhh---cCcceeeeeeccccceeeeec----cCceeccccCcchh
Confidence                               0233566899999999995   467899999999999999976    55788999999999


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC
Q psy2107         207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV  286 (391)
Q Consensus       207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  286 (391)
                      .+.++-+|..+++++.+.|.+.++||++.                            ....+..+.+|...|+++.|.-+
T Consensus       317 LtHcstHptQrLVvTsSrDtTFRLWDFRe----------------------------aI~sV~VFQGHtdtVTS~vF~~d  368 (481)
T KOG0300|consen  317 LTHCSTHPTQRLVVTSSRDTTFRLWDFRE----------------------------AIQSVAVFQGHTDTVTSVVFNTD  368 (481)
T ss_pred             ccccccCCcceEEEEeccCceeEeccchh----------------------------hcceeeeecccccceeEEEEecC
Confidence            99999999999999999999999999973                            13367789999999999999988


Q ss_pred             CeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce-EEEEeccccCcEE
Q psy2107         287 DEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI-VKSTFSSHKEWVQ  364 (391)
Q Consensus       287 ~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~  364 (391)
                      ..+++|+.|.+|++||+++. .++.++....+++.++.+..+..++.--++..|++||+....-.. +...-.+|...|+
T Consensus       369 d~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~  448 (481)
T KOG0300|consen  369 DRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVT  448 (481)
T ss_pred             CceeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeee
Confidence            89999999999999999875 578899999999999999988899999999999999997544222 2224468999999


Q ss_pred             EEEECCCCC-CEEEEeeCCCcEEEEec
Q psy2107         365 SVRWSPIDP-QLFVSASFDNSVKLWDL  390 (391)
Q Consensus       365 ~~~~~~~~~-~~l~s~~~dg~v~iwdl  390 (391)
                      |++|..+.. .-|++||.|..+.=|.+
T Consensus       449 c~AW~eehp~cnLftcGFDR~v~gW~i  475 (481)
T KOG0300|consen  449 CCAWLEEHPACNLFTCGFDRMVAGWKI  475 (481)
T ss_pred             eeeccccCcccccccccccceeeeeEe
Confidence            999975211 23889999999999986

>KOG2445|consensus

Probab=99.96  E-value=1.1e-26  Score=183.08  Aligned_cols=258  Identities=21%  Similarity=0.315  Sum_probs=189.7

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---C--ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---G--EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---~--~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      .+|.+-|+|+.|+  |+.+|+|+.|++++|||.+   +  ......+.|.+.|..|.|.+ ..-|+.+|+++.|+++.||
T Consensus        10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAh-PEfGqvvA~cS~Drtv~iW   88 (361)
T KOG2445|consen   10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAH-PEFGQVVATCSYDRTVSIW   88 (361)
T ss_pred             cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecC-ccccceEEEEecCCceeee
Confidence            3699999999997  9999999999999999962   1  23345678999999999987 4578999999999999999


Q ss_pred             eec-----CCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         186 EWK-----VESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       186 d~~-----~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      .-.     ..+..+....++......|+.++|.|  -|-.|++++.||.++||+.-............+.          
T Consensus        89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei----------  158 (361)
T KOG2445|consen   89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEI----------  158 (361)
T ss_pred             eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhh----------
Confidence            731     11234556667777788999999999  4678999999999999997543322111100000          


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccCC----eEEEEECC-----CeEEEEecccCc----eeEEEECC-eeeEEEEEC
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAVD----EIITSSWD-----HTLKIWDAELGG----MKSEIVGN-KSFFDVHYS  324 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~l~s~~~d-----g~i~iwd~~~~~----~~~~~~~~-~~i~~~~~~  324 (391)
                            .........+..+..|+.|++..    .|+.|+.+     +.+.||....+.    .+.++..+ .+|++++|.
T Consensus       159 ------~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wA  232 (361)
T KOG2445|consen  159 ------QNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWA  232 (361)
T ss_pred             ------hhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeec
Confidence                  00011122456678899999643    35565544     488898765432    23344444 499999999


Q ss_pred             CC-C---CEEEEeeCCCcEEEEcCCCCC-----------------cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         325 PL-S---KLVITASADKQIRLYDPKVKE-----------------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       325 p~-~---~~l~~g~~dg~i~iwd~~~~~-----------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                      |+ |   .+||+++.|| |+||.++...                 .-..+..+.+|++.|..+.|+- -+..|+|.|.||
T Consensus       233 Pn~Gr~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNm-tGtiLsStGdDG  310 (361)
T KOG2445|consen  233 PNIGRSYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNM-TGTILSSTGDDG  310 (361)
T ss_pred             cccCCceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEee-eeeEEeecCCCc
Confidence            97 3   4799999999 9999987311                 1224566889999999999998 667999999999


Q ss_pred             cEEEEe
Q psy2107         384 SVKLWD  389 (391)
Q Consensus       384 ~v~iwd  389 (391)
                      +||+|.
T Consensus       311 ~VRLWk  316 (361)
T KOG2445|consen  311 CVRLWK  316 (361)
T ss_pred             eeeehh
Confidence            999995

>KOG0282|consensus

Probab=99.96  E-value=4.9e-29  Score=207.39  Aligned_cols=210  Identities=20%  Similarity=0.467  Sum_probs=174.8

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      ..+..+.+|+..|.++.|.|.  .+.+|++++.|+.|++|++.   ....+++++.+|..+|..++|+++|..|++++.|
T Consensus       205 k~~~~~~gH~kgvsai~~fp~--~~hLlLS~gmD~~vklW~vy---~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD  279 (503)
T KOG0282|consen  205 KLSHNLSGHTKGVSAIQWFPK--KGHLLLSGGMDGLVKLWNVY---DDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD  279 (503)
T ss_pred             hheeeccCCccccchhhhccc--eeeEEEecCCCceEEEEEEe---cCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence            455678899999999999765  78899999999999999976   2568999999999999999999999999999999


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEec
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDA  303 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~  303 (391)
                      +.|++||+++++.                             +..+. ....++|+.|+|++  .+++|+.|+.|+.||+
T Consensus       280 ~~lKlwDtETG~~-----------------------------~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDi  329 (503)
T KOG0282|consen  280 RFLKLWDTETGQV-----------------------------LSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDI  329 (503)
T ss_pred             eeeeeeccccceE-----------------------------EEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEec
Confidence            9999999998654                             44443 24567899999654  5999999999999999


Q ss_pred             ccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc-------------------------------e
Q psy2107         304 ELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA-------------------------------I  351 (391)
Q Consensus       304 ~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~-------------------------------~  351 (391)
                      ++++.++++..|- +|..+.|-++|+++++.++|++++||+.+..-..                               .
T Consensus       330 Rs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i  409 (503)
T KOG0282|consen  330 RSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYI  409 (503)
T ss_pred             cchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceE
Confidence            9999998887764 8999999999999999999999999997643200                               0


Q ss_pred             ------------EEEEecccc--CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         352 ------------VKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       352 ------------~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                  ....+.+|.  +--..+.||| ++.+|++|+.||.+.+||-+
T Consensus       410 ~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSp-DG~~l~SGdsdG~v~~wdwk  462 (503)
T KOG0282|consen  410 AIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSP-DGRTLCSGDSDGKVNFWDWK  462 (503)
T ss_pred             EEEecccccccCHhhhhcceeccCceeeEEEcC-CCCeEEeecCCccEEEeech
Confidence                        011234453  3456789999 66789999999999999964

>KOG0283|consensus

Probab=99.96  E-value=7.6e-28  Score=213.48  Aligned_cols=204  Identities=19%  Similarity=0.301  Sum_probs=169.1

Q ss_pred             ecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC----------------------------CC---------
Q psy2107         150 NIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV----------------------------ES---------  191 (391)
Q Consensus       150 ~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~----------------------------~~---------  191 (391)
                      .+. .|.+.|+++.|   +++|+|||+|+.||.|+||.+..                            ..         
T Consensus       261 e~~~ah~gaIw~mKF---S~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s  337 (712)
T KOG0283|consen  261 EISNAHKGAIWAMKF---SHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTS  337 (712)
T ss_pred             ccccccCCcEEEEEe---CCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccc
Confidence            344 89999999999   88999999999999999998643                            00         


Q ss_pred             -------------------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         192 -------------------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       192 -------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                                         -..++++.+.||.+.|..+.|+.++ +|+++++|.+|++|++..                 
T Consensus       338 ~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~-----------------  399 (712)
T KOG0283|consen  338 SSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGR-----------------  399 (712)
T ss_pred             ccccccCCccccCCCccccccccchhhhhccchhheecccccCC-eeEeccccccEEeecCCC-----------------
Confidence                               0012345567899999999999875 899999999999999965                 


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEec--cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV  330 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l  330 (391)
                                  ..++..+ .|...|+|++|+  ++++|++|+-||.||||++...+.......+.-|++++|.|+|++.
T Consensus       400 ------------~~CL~~F-~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~a  466 (712)
T KOG0283|consen  400 ------------KECLKVF-SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGA  466 (712)
T ss_pred             ------------cceeeEE-ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceE
Confidence                        4466666 499999999999  5678999999999999999999998888888899999999999999


Q ss_pred             EEeeCCCcEEEEcCCCCCcceEEEEec---------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         331 ITASADKQIRLYDPKVKEGAIVKSTFS---------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       331 ~~g~~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++|+.+|.+++|+....+   +.....         .|. .|+++.|.|.+..-++..+.|..|||+|+|
T Consensus       467 vIGt~~G~C~fY~t~~lk---~~~~~~I~~~~~Kk~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~  532 (712)
T KOG0283|consen  467 VIGTFNGYCRFYDTEGLK---LVSDFHIRLHNKKKKQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGR  532 (712)
T ss_pred             EEEEeccEEEEEEccCCe---EEEeeeEeeccCccccCc-eeeeeEecCCCCCeEEEecCCCceEEEecc
Confidence            999999999999987654   222111         133 799999999666557777889999999984

>KOG0973|consensus

Probab=99.96  E-value=4.2e-27  Score=214.11  Aligned_cols=241  Identities=24%  Similarity=0.426  Sum_probs=198.1

Q ss_pred             CCCcEEEEEec--CCEEEEEE--CCCeEEEEcCCC-------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEe
Q psy2107         115 HDDWVSAIDFH--NDWILTGC--YDHSVHIWTRRG-------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS  177 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~--~dg~i~iwd~~~-------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~  177 (391)
                      +...|.+++.+  +..++||+  .||.++||+.+.             +.+.+...|.+.|.|+.|   +++|.+||+|+
T Consensus        12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~---S~dG~~lAsGS   88 (942)
T KOG0973|consen   12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRF---SPDGSYLASGS   88 (942)
T ss_pred             CCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEE---CCCCCeEeecc
Confidence            45568889888  56999999  999999997521             234456689999999999   88999999999


Q ss_pred             CCCcEEEEeecC--------------CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC
Q psy2107         178 TDQTAMIWEWKV--------------ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS  243 (391)
Q Consensus       178 ~dg~v~iwd~~~--------------~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~  243 (391)
                      .|+.|.||....              ....++++..+.+|...|..++|+|++.+|++++.|++|.+|+..+        
T Consensus        89 DD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~t--------  160 (942)
T KOG0973|consen   89 DDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKT--------  160 (942)
T ss_pred             CcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccc--------
Confidence            999999999762              0124567889999999999999999999999999999999999977        


Q ss_pred             CCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC-------
Q psy2107         244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN-------  315 (391)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-------  315 (391)
                                           ...+..+.+|.+.|..+.|.|-|. |++-+.|++|++|++.+......+..+       
T Consensus       161 ---------------------F~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~  219 (942)
T KOG0973|consen  161 ---------------------FELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLT  219 (942)
T ss_pred             ---------------------ceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCc
Confidence                                 557889999999999999997665 888899999999998876666665543       


Q ss_pred             eeeEEEEECCCCCEEEEeeC----CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC----CCC------------E
Q psy2107         316 KSFFDVHYSPLSKLVITASA----DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI----DPQ------------L  375 (391)
Q Consensus       316 ~~i~~~~~~p~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~------------~  375 (391)
                      .-+..+.|||||.+|++...    -.++.|.+-.+   ...-..+-||.+++.+++|+|.    ...            .
T Consensus       220 T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~t---Wk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i  296 (942)
T KOG0973|consen  220 TFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGT---WKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCI  296 (942)
T ss_pred             ceeeecccCCCcCeecchhhccCCcceeEEEecCC---ceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEE
Confidence            25788999999999998732    34677777433   3366688899999999999982    111            7


Q ss_pred             EEEeeCCCcEEEEec
Q psy2107         376 FVSASFDNSVKLWDL  390 (391)
Q Consensus       376 l~s~~~dg~v~iwdl  390 (391)
                      +|+||.|++|-||..
T Consensus       297 ~AvgSqDrSlSVW~T  311 (942)
T KOG0973|consen  297 AAVGSQDRSLSVWNT  311 (942)
T ss_pred             EEEecCCccEEEEec
Confidence            899999999999973

>KOG0269|consensus

Probab=99.96  E-value=1e-28  Score=216.43  Aligned_cols=231  Identities=19%  Similarity=0.291  Sum_probs=191.3

Q ss_pred             EEEEec---CCEEEEEECCCeEEEEcCC----CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         120 SAIDFH---NDWILTGCYDHSVHIWTRR----GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       120 ~~~~~~---~~~l~t~~~dg~i~iwd~~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ..+.|.   .++|||++..|.|.+||+.    .+.+..+..|...++++.|++.  ...+|++|+.||+|++||++... 
T Consensus        91 ~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~t--ep~iliSGSQDg~vK~~DlR~~~-  167 (839)
T KOG0269|consen   91 ADVKWGQLYSNLIATCSTNGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHST--EPNILISGSQDGTVKCWDLRSKK-  167 (839)
T ss_pred             hhcccccchhhhheeecCCCcEEEEecCccccchhhhHhhhhccceeeeeeccC--CccEEEecCCCceEEEEeeeccc-
Confidence            344554   6799999999999999994    3455578899999999999876  44699999999999999987433 


Q ss_pred             ceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         193 SIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                         ...++.+....|..++|+| .+..|+++...|.+++||++...                            .+...+
T Consensus       168 ---S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~----------------------------r~~~k~  216 (839)
T KOG0269|consen  168 ---SKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPD----------------------------RCEKKL  216 (839)
T ss_pred             ---ccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCch----------------------------hHHHHh
Confidence               3556677888999999999 56789999999999999998633                            467788


Q ss_pred             cCccCcccEEEeccCC-eEEEEECCCeEEEEecccCc--eeEEEECCeeeEEEEECCCCCE-EEEee--CCCcEEEEcCC
Q psy2107         272 KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGG--MKSEIVGNKSFFDVHYSPLSKL-VITAS--ADKQIRLYDPK  345 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~i~~~~~~p~~~~-l~~g~--~dg~i~iwd~~  345 (391)
                      ..|.++|.|+.|+|++ .|++|+.|+.|+|||..+++  .+.++..-.++.++.|-|...+ |++++  .|-.|+|||++
T Consensus       217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvr  296 (839)
T KOG0269|consen  217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVR  296 (839)
T ss_pred             hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccchhhhhhccccceEEEEeec
Confidence            8999999999999754 49999999999999998654  4566667779999999998764 55554  47789999997


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      .  ...+...+..|...++.++|...+...+.+++.||+|.
T Consensus       297 R--PYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~  335 (839)
T KOG0269|consen  297 R--PYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL  335 (839)
T ss_pred             c--ccccceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence            5  34466788899999999999876677899999999874

>KOG0301|consensus

Probab=99.96  E-value=7.6e-28  Score=208.63  Aligned_cols=234  Identities=22%  Similarity=0.417  Sum_probs=199.3

Q ss_pred             cccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCCCceE---EeccCCCCCeeE-EEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHK---LNIPGHGGPVKG-VAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~---~~~~~~~~~v~~-l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      .+.+|+..|..+++. +..++++|.||++++|+-.++..   ..+.+|.+-|.. ++|.+  .++..+++|+.|.++.+|
T Consensus         9 ~l~gH~~DVr~v~~~~~~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e--~~~~~l~~g~~D~~i~v~   86 (745)
T KOG0301|consen    9 ELEGHKSDVRAVAVTDGVCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAE--SDKGRLVVGGMDTTIIVF   86 (745)
T ss_pred             EeccCccchheeEecCCeEEeecCCCCceeeeeccCcccccceecccCcceeeccceecc--ccCcceEeecccceEEEE
Confidence            356899999999987 55799999999999999855433   346678887777 88855  255579999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      ...    ...++..+.+|...|.|++...++. +++||.|.++++|....                              
T Consensus        87 ~~~----~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~~~------------------------------  131 (745)
T KOG0301|consen   87 KLS----QAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRIGE------------------------------  131 (745)
T ss_pred             ecC----CCCchhhhhccccceeeeecCCcCc-eEecccccceEEecchh------------------------------
Confidence            854    5578899999999999999888887 99999999999998843                              


Q ss_pred             CceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         266 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                       ....+.+|+..|+++..-|.+.+++||.|.+|++|.-  ++.++++.+|. .|+.+++-+++ .+++++.||.|++|++
T Consensus       132 -l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~  207 (745)
T KOG0301|consen  132 -LVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL  207 (745)
T ss_pred             -hhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec
Confidence             5566899999999999999899999999999999975  78889999887 78899998765 4667789999999998


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       +++   ++.++.+|+..|.+++..+ +...++|+|.|++++||+.
T Consensus       208 -~ge---~l~~~~ghtn~vYsis~~~-~~~~Ivs~gEDrtlriW~~  248 (745)
T KOG0301|consen  208 -DGE---VLLEMHGHTNFVYSISMAL-SDGLIVSTGEDRTLRIWKK  248 (745)
T ss_pred             -cCc---eeeeeeccceEEEEEEecC-CCCeEEEecCCceEEEeec
Confidence             445   7788999999999999777 5568999999999999974

>KOG0647|consensus

Probab=99.96  E-value=5.5e-27  Score=184.23  Aligned_cols=235  Identities=21%  Similarity=0.320  Sum_probs=181.4

Q ss_pred             CCCcEEEEEecC---CEEEEEECCCeEEEEcCCC--ceE-EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         115 HDDWVSAIDFHN---DWILTGCYDHSVHIWTRRG--EHK-LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       115 h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~--~~~-~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      -.+.|.+|+|++   .++++||.||+||+|+++.  ... .....|.++|.+++|   +.++..+++|+.|+.+++||+.
T Consensus        26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~W---sddgskVf~g~~Dk~~k~wDL~  102 (347)
T KOG0647|consen   26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCW---SDDGSKVFSGGCDKQAKLWDLA  102 (347)
T ss_pred             cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEE---ccCCceEEeeccCCceEEEEcc
Confidence            456899999994   4788999999999999943  222 345579999999999   8899999999999999999975


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQ--QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                        ++   .+..+..|.++|.++.|-+...  .|++||.|++|+.||.+..                             .
T Consensus       103 --S~---Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~-----------------------------~  148 (347)
T KOG0647|consen  103 --SG---QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS-----------------------------N  148 (347)
T ss_pred             --CC---CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCC-----------------------------C
Confidence              22   3456677999999999987655  8999999999999999863                             3


Q ss_pred             ceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE-E--CCeeeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI-V--GNKSFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      ++.++.- .+.+.++..- ...++.+..+..|.+|+++++...... .  ..-.+.|++..++....+.|+-+|.+.|..
T Consensus       149 pv~t~~L-PeRvYa~Dv~-~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~  226 (347)
T KOG0647|consen  149 PVATLQL-PERVYAADVL-YPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQY  226 (347)
T ss_pred             eeeeeec-cceeeehhcc-CceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEe
Confidence            4444442 2344444332 246788889999999999876543322 2  233788999999988889999999999998


Q ss_pred             CCCCCcceEEEEeccccC---------cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFSSHKE---------WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..+.. ..-..++.|+.         .|++++|+| ....|+|+|.||++.+||-
T Consensus       227 id~~~~-~~nFtFkCHR~~~~~~~~VYaVNsi~FhP-~hgtlvTaGsDGtf~FWDk  280 (347)
T KOG0647|consen  227 IDDPNP-KDNFTFKCHRSTNSVNDDVYAVNSIAFHP-VHGTLVTAGSDGTFSFWDK  280 (347)
T ss_pred             cCCCCc-cCceeEEEeccCCCCCCceEEecceEeec-ccceEEEecCCceEEEecc
Confidence            876532 23345566652         589999999 5557999999999999983

>KOG0299|consensus

Probab=99.96  E-value=2.5e-27  Score=196.12  Aligned_cols=242  Identities=19%  Similarity=0.353  Sum_probs=194.1

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceE---E-e------------c--cCCCCCeeEEEEEecCC
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHK---L-N------------I--PGHGGPVKGVAWLYNDG  168 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~---~-~------------~--~~~~~~v~~l~~~~~~~  168 (391)
                      .....|.-+|+|++++  +++.++++.||+|.=|++ ++...   . +            .  ..|...+.+++.   ++
T Consensus       136 ~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~av---S~  212 (479)
T KOG0299|consen  136 RVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAV---SS  212 (479)
T ss_pred             eeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEE---cC
Confidence            3345699999999998  459999999999999987 33211   0 0            1  268888999999   88


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ++.+|++|+.|..|.||+.+    +.+.+..+.+|.+.|.+++|-.....+++++.|+.|++|+++.             
T Consensus       213 Dgkylatgg~d~~v~Iw~~~----t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~-------------  275 (479)
T KOG0299|consen  213 DGKYLATGGRDRHVQIWDCD----TLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ-------------  275 (479)
T ss_pred             CCcEEEecCCCceEEEecCc----ccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH-------------
Confidence            99999999999999999965    5567788999999999999999888999999999999999975             


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECCeeeEEEEECCCC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS  327 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~  327 (391)
                                      ...+.++.+|++.|..+.-..-.++++.+ .|+++++|++.....+....+...+-|++|-. .
T Consensus       276 ----------------~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In-~  338 (479)
T KOG0299|consen  276 ----------------LSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIN-D  338 (479)
T ss_pred             ----------------hHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEec-c
Confidence                            45677889999999999888767766655 99999999996544443333444888999875 5


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEec----------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFS----------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..+++|+++|.|.+|++...+ +.......          .+..+|++++..| +..++++|+.+|.|++|-+
T Consensus       339 ~HfvsGSdnG~IaLWs~~KKk-plf~~~~AHgv~~~~~~~~~~~Witsla~i~-~sdL~asGS~~G~vrLW~i  409 (479)
T KOG0299|consen  339 EHFVSGSDNGSIALWSLLKKK-PLFTSRLAHGVIPELDPVNGNFWITSLAVIP-GSDLLASGSWSGCVRLWKI  409 (479)
T ss_pred             cceeeccCCceEEEeeecccC-ceeEeeccccccCCccccccccceeeeEecc-cCceEEecCCCCceEEEEe
Confidence            678899999999999987654 11111111          1223899999999 8889999999999999975

>KOG0275|consensus

Probab=99.96  E-value=5.4e-28  Score=191.90  Aligned_cols=237  Identities=17%  Similarity=0.275  Sum_probs=194.6

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE---------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL---------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~---------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      ++....+-|..|+  |++|++|+.||-|.+||....++.         .+.-+..+|.|+.|   +.+...+|+|+.||.
T Consensus       210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~F---SRDsEMlAsGsqDGk  286 (508)
T KOG0275|consen  210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISF---SRDSEMLASGSQDGK  286 (508)
T ss_pred             cccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEee---cccHHHhhccCcCCc
Confidence            3566778888998  679999999999999998433322         23357889999999   888999999999999


Q ss_pred             EEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      |++|.+.    ++.|++.|. .|+..|+|+.|+.++..+++++.|.++++.-+..                         
T Consensus       287 IKvWri~----tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKS-------------------------  337 (508)
T KOG0275|consen  287 IKVWRIE----TGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKS-------------------------  337 (508)
T ss_pred             EEEEEEe----cchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEecccc-------------------------
Confidence            9999976    456777776 8999999999999999999999999999998876                         


Q ss_pred             cCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCC-CEEEEeeC
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLS-KLVITASA  335 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~-~~l~~g~~  335 (391)
                          .+.+..+.+|++.|+...|.++ ..+++++.||+|++|+.++..++.+++...   +|.++..-|.+ ..++++..
T Consensus       338 ----GK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr  413 (508)
T KOG0275|consen  338 ----GKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR  413 (508)
T ss_pred             ----chhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcC
Confidence                4467789999999999999954 569999999999999999999999987543   78888887764 57888888


Q ss_pred             CCcEEEEcCCCCCcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .++|+|.++.. +   +++.+..   ..+...+...+| .+.++...+.|+.++.+.+
T Consensus       414 sntv~imn~qG-Q---vVrsfsSGkREgGdFi~~~lSp-kGewiYcigED~vlYCF~~  466 (508)
T KOG0275|consen  414 SNTVYIMNMQG-Q---VVRSFSSGKREGGDFINAILSP-KGEWIYCIGEDGVLYCFSV  466 (508)
T ss_pred             CCeEEEEeccc-e---EEeeeccCCccCCceEEEEecC-CCcEEEEEccCcEEEEEEe
Confidence            99999998753 2   4444432   123456667899 6678999999999988764

>KOG1332|consensus

Probab=99.96  E-value=1.6e-27  Score=181.88  Aligned_cols=228  Identities=21%  Similarity=0.339  Sum_probs=185.1

Q ss_pred             CCccceEEEEEEeccCC-CCCCcccCCCCcEEEEEec----CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEE
Q psy2107          90 ISSENVIDVEYLESTPT-PSPLDCILHDDWVSAIDFH----NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGV  161 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~----~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l  161 (391)
                      -++++.+++........ .....+.||+++|..++|.    |.+||++++||.|.||.-++.   +......|...|+++
T Consensus        29 csSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV  108 (299)
T KOG1332|consen   29 CSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSV  108 (299)
T ss_pred             ecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceee
Confidence            46889999988776655 4567788999999999996    779999999999999998543   334556899999999


Q ss_pred             EEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---C-----------CEEEEEeCCCc
Q psy2107         162 AWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES---R-----------QQFATGGWDCL  227 (391)
Q Consensus       162 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~-----------~~l~sg~~dg~  227 (391)
                      +|.| +..+-.|++++.||.|.+.+++.. +..........|.-.|++++|.|.   |           +.|++|+.|..
T Consensus       109 ~wap-heygl~LacasSDG~vsvl~~~~~-g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~  186 (299)
T KOG1332|consen  109 AWAP-HEYGLLLACASSDGKVSVLTYDSS-GGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNL  186 (299)
T ss_pred             cccc-cccceEEEEeeCCCcEEEEEEcCC-CCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccc
Confidence            9988 567889999999999999998754 344555667789999999999985   4           56999999999


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-----CeEEEEECCCeEEEEe
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-----DEIITSSWDHTLKIWD  302 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~l~s~~~dg~i~iwd  302 (391)
                      |+||+.+.+.                           .....++.+|.+.|+.++|.|.     ..+++++.||++.||.
T Consensus       187 VkiW~~~~~~---------------------------w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt  239 (299)
T KOG1332|consen  187 VKIWKFDSDS---------------------------WKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWT  239 (299)
T ss_pred             eeeeecCCcc---------------------------hhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEE
Confidence            9999997642                           2344568899999999999964     3599999999999998


Q ss_pred             cccCce--eEEE--ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         303 AELGGM--KSEI--VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       303 ~~~~~~--~~~~--~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      .+....  ..++  ..+..+..+.||+.|+.|++++.|+.|.+|.-..
T Consensus       240 ~~~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~  287 (299)
T KOG1332|consen  240 KDEEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENV  287 (299)
T ss_pred             ecCccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence            763211  1111  1345799999999999999999999999997554

>KOG0308|consensus

Probab=99.96  E-value=9e-28  Score=206.75  Aligned_cols=265  Identities=17%  Similarity=0.302  Sum_probs=211.9

Q ss_pred             CccceEEEEEEeccCCC----CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-C--ceEEeccCCCCCeeEE
Q psy2107          91 SSENVIDVEYLESTPTP----SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-G--EHKLNIPGHGGPVKGV  161 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~----~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~--~~~~~~~~~~~~v~~l  161 (391)
                      ..++.+++|........    .......|.+||+.++..  ++.|+++|.|-+|++|+.. .  ....++..|...|.|+
T Consensus        44 GRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcl  123 (735)
T KOG0308|consen   44 GRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCL  123 (735)
T ss_pred             CCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheee
Confidence            36888888876644332    233445599999999886  6799999999999999983 2  4556788999999999


Q ss_pred             EEEecCCCCeEEEEEeCCCcEEEEeecCCCC------ceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         162 AWLYNDGKDAAFISVSTDQTAMIWEWKVESN------SIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       162 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~------~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      ++.  .++..++|+|+-|+.|.+||++....      .......+. ++..+|.+++.++.|..|++|+..+.|++||.+
T Consensus       124 a~~--ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDpr  201 (735)
T KOG0308|consen  124 AYI--AKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPR  201 (735)
T ss_pred             eec--ccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccc
Confidence            984  34677999999999999999874421      111222333 788999999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV  313 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~  313 (391)
                      +                             .+.+..+.+|...|.++..+++| ++++++.||+|++||+...+++.++.
T Consensus       202 t-----------------------------~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~  252 (735)
T KOG0308|consen  202 T-----------------------------CKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI  252 (735)
T ss_pred             c-----------------------------ccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE
Confidence            7                             45677888999999999999555 69999999999999999999999998


Q ss_pred             CCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         314 GNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       314 ~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .|. .++++..+|+-..+.+|+.||.|+.=|+++.....++.   ....+|..+..+..+.. +-.++.|+.|+-|-+
T Consensus       253 vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlic---k~daPv~~l~~~~~~~~-~WvtTtds~I~rW~~  326 (735)
T KOG0308|consen  253 VHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLIC---KEDAPVLKLHLHEHDNS-VWVTTTDSSIKRWKL  326 (735)
T ss_pred             eccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEee---cCCCchhhhhhccccCC-ceeeeccccceecCC
Confidence            776 89999999999999999999999999998754332332   24456777777753333 466777889988864

>KOG0300|consensus

Probab=99.96  E-value=7.7e-28  Score=190.48  Aligned_cols=250  Identities=28%  Similarity=0.476  Sum_probs=195.2

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER  205 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  205 (391)
                      ...+++.-.++++.     ...+..+.+|...|+.++.   ......+.+++.|.+.+||.++    ...|+..+.+|.+
T Consensus       124 tsrivssFk~~t~~-----~~lvre~~GHkDGiW~Vaa---~~tqpi~gtASADhTA~iWs~E----sg~CL~~Y~GH~G  191 (481)
T KOG0300|consen  124 TSRIVSSFKDGTVK-----FRLVRELEGHKDGIWHVAA---DSTQPICGTASADHTARIWSLE----SGACLATYTGHTG  191 (481)
T ss_pred             cchheeeecCCcee-----Eeehhhhcccccceeeehh---hcCCcceeecccccceeEEeec----cccceeeeccccc
Confidence            34566666776643     2345567899999999998   5555689999999999999976    5689999999999


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC----CCCCC-CCcccccccc------ccccCCCCCceeeecCc
Q psy2107         206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP----SENGD-EGTTSKKRKK------EYSSASSRTPLITLKGH  274 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~----~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~  274 (391)
                      .|.+++|++.+.++++++.|++-.||...-.-.....    ...+. .....+....      ......-+.|+..+.+|
T Consensus       192 SVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH  271 (481)
T KOG0300|consen  192 SVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGH  271 (481)
T ss_pred             ceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeecc
Confidence            9999999999999999999999999984221111111    00000 0000000000      01111235678889999


Q ss_pred             cCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         275 KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       275 ~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      ...|.+..|. .+..+++++.|.+..+||++++.++..+.+|. ..+.++-+|..+++++++.|.+.++||++.  ....
T Consensus       272 ~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe--aI~s  349 (481)
T KOG0300|consen  272 RAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE--AIQS  349 (481)
T ss_pred             ccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchh--hcce
Confidence            9999999999 55669999999999999999999999999887 788889999999999999999999999983  3446


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..+.+|...|+++.|.. +. -+++|++|.+|+|||||
T Consensus       350 V~VFQGHtdtVTS~vF~~-dd-~vVSgSDDrTvKvWdLr  386 (481)
T KOG0300|consen  350 VAVFQGHTDTVTSVVFNT-DD-RVVSGSDDRTVKVWDLR  386 (481)
T ss_pred             eeeecccccceeEEEEec-CC-ceeecCCCceEEEeeec
Confidence            778999999999999998 43 39999999999999997

>KOG0973|consensus

Probab=99.96  E-value=2.8e-26  Score=208.84  Aligned_cols=277  Identities=21%  Similarity=0.328  Sum_probs=207.4

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccC----------CCCCCcccCCCCcEEEEEec--CCEEEEEEC
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTP----------TPSPLDCILHDDWVSAIDFH--NDWILTGCY  134 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~  134 (391)
                      ..+..++|..+++.-        .-.++.+.+|......          ++...+...|.+.|+|+.|+  |.+||+|+.
T Consensus        18 SIdv~pdg~~~aTgG--------q~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD   89 (942)
T KOG0973|consen   18 SIDVHPDGVKFATGG--------QVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD   89 (942)
T ss_pred             EEEecCCceeEecCC--------ccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC
Confidence            346667776666522        1123333466544222          22334455699999999998  779999999


Q ss_pred             CCeEEEEcCCC-------------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         135 DHSVHIWTRRG-------------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       135 dg~i~iwd~~~-------------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      |+.|.||....                   +.+..+.+|.+.|..++|   +|++.+|++++.|++|.+|+..    .+.
T Consensus        90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~W---sp~~~~lvS~s~DnsViiwn~~----tF~  162 (942)
T KOG0973|consen   90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNW---SPDDSLLVSVSLDNSVIIWNAK----TFE  162 (942)
T ss_pred             cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceecc---CCCccEEEEecccceEEEEccc----cce
Confidence            99999998641                   245567899999999999   7789999999999999999943    568


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--  273 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  273 (391)
                      .+..+.+|.+.|..+.|.|-|++|++-+.|++|++|+...-.                             ..+.+..  
T Consensus       163 ~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~-----------------------------i~k~It~pf  213 (942)
T KOG0973|consen  163 LLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWG-----------------------------IEKSITKPF  213 (942)
T ss_pred             eeeeeecccccccceEECCccCeeeeecCCceEEEEEcccce-----------------------------eeEeeccch
Confidence            899999999999999999999999999999999999975421                             2222222  


Q ss_pred             ----ccCcccEEEeccCCeEEEE-----ECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-----CC----------
Q psy2107         274 ----HKEAISAVQWTAVDEIITS-----SWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL-----SK----------  328 (391)
Q Consensus       274 ----~~~~v~~~~~~~~~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~-----~~----------  328 (391)
                          -...+..+.|+|+|.+++.     +.-.++.|.+-.+.+.-..+-+|. ++.++.|+|.     .+          
T Consensus       214 ~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~  293 (942)
T KOG0973|consen  214 EESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCY  293 (942)
T ss_pred             hhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcc
Confidence                2334678999988874443     223578888887777777777665 9999999982     11          


Q ss_pred             --EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         329 --LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       329 --~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        .+|+|+.|++|.||.....+....+..  -....|.+++|+| ++..|..||.||+|.+..+
T Consensus       294 y~i~AvgSqDrSlSVW~T~~~RPl~vi~~--lf~~SI~DmsWsp-dG~~LfacS~DGtV~~i~F  354 (942)
T KOG0973|consen  294 YCIAAVGSQDRSLSVWNTALPRPLFVIHN--LFNKSIVDMSWSP-DGFSLFACSLDGTVALIHF  354 (942)
T ss_pred             eEEEEEecCCccEEEEecCCCCchhhhhh--hhcCceeeeeEcC-CCCeEEEEecCCeEEEEEc
Confidence              678999999999999755442222222  2456799999999 6678999999999998865

>KOG0264|consensus

Probab=99.95  E-value=4.4e-27  Score=194.52  Aligned_cols=214  Identities=20%  Similarity=0.368  Sum_probs=174.9

Q ss_pred             ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc------eeEEEEEecCCCCeEEEEEcCCC-CEEEEEe
Q psy2107         151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS------IECIHVCRGHERGLETVTVSESR-QQFATGG  223 (391)
Q Consensus       151 ~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~------~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~  223 (391)
                      ...|.+.|+.+.+.|.  +...+++++..+.|.|||+......      ..+-..+.+|.+.-.+++|++.. -.|++|+
T Consensus       120 ~i~h~gEVnRaRymPQ--np~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~  197 (422)
T KOG0264|consen  120 KINHDGEVNRARYMPQ--NPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGS  197 (422)
T ss_pred             eccCCccchhhhhCCC--CCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeecc
Confidence            3469999999999886  4558889999999999997533322      23334788999888889999954 4689999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCeEEEEECCCeEEEE
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIW  301 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iw  301 (391)
                      .|+.|++||+......                      .....+...+.+|...|..++|++  ...|.+++.|+.+.||
T Consensus       198 ~d~~i~lwdi~~~~~~----------------------~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iw  255 (422)
T KOG0264|consen  198 DDHTICLWDINAESKE----------------------DKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIW  255 (422)
T ss_pred             CCCcEEEEeccccccC----------------------CccccceEEeecCCcceehhhccccchhhheeecCCCeEEEE
Confidence            9999999999764331                      112346778899999999999994  4569999999999999


Q ss_pred             eccc--CceeEEEECC-eeeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         302 DAEL--GGMKSEIVGN-KSFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       302 d~~~--~~~~~~~~~~-~~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      |+++  .++......| .++.|++|+|.+ ..||+|+.|++|.+||+|....  .+..+.+|...|..+.|+|....+||
T Consensus       256 D~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~--~lh~~e~H~dev~~V~WSPh~etvLA  333 (422)
T KOG0264|consen  256 DTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK--PLHTFEGHEDEVFQVEWSPHNETVLA  333 (422)
T ss_pred             EcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc--CceeccCCCcceEEEEeCCCCCceeE
Confidence            9994  4455555554 499999999975 5788999999999999998654  56788999999999999999999999


Q ss_pred             EeeCCCcEEEEec
Q psy2107         378 SASFDNSVKLWDL  390 (391)
Q Consensus       378 s~~~dg~v~iwdl  390 (391)
                      |++.|+.+.|||+
T Consensus       334 SSg~D~rl~vWDl  346 (422)
T KOG0264|consen  334 SSGTDRRLNVWDL  346 (422)
T ss_pred             ecccCCcEEEEec
Confidence            9999999999997

>KOG0772|consensus

Probab=99.95  E-value=2.6e-27  Score=198.76  Aligned_cols=225  Identities=22%  Similarity=0.305  Sum_probs=170.5

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      .....+.+|+..|.++++   ++.|..|++|+.|.+|++||+.-........+.+ ......|.++.|++.+..|++.+.
T Consensus       158 shEi~l~hgtk~Vsal~~---Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg  234 (641)
T KOG0772|consen  158 SHEIQLKHGTKIVSALAV---DPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSG  234 (641)
T ss_pred             cceEeccCCceEEEEeee---cCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEec
Confidence            445567889999999999   8889999999999999999976333222222222 234568999999999999999998


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEe
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWD  302 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd  302 (391)
                      ....+++|-+...... ...           ..     .-..-...-++|...++|.+|+|.+  .+++++.||++||||
T Consensus       235 ~aqakl~DRdG~~~~e-~~K-----------GD-----QYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWd  297 (641)
T KOG0772|consen  235 SAQAKLLDRDGFEIVE-FSK-----------GD-----QYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWD  297 (641)
T ss_pred             CcceeEEccCCceeee-eec-----------cc-----hhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEe
Confidence            9999999975422110 000           00     0011223346899999999999764  499999999999999


Q ss_pred             cccCc-eeEEEECC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC--cEEEEEECCCCC
Q psy2107         303 AELGG-MKSEIVGN------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE--WVQSVRWSPIDP  373 (391)
Q Consensus       303 ~~~~~-~~~~~~~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~  373 (391)
                      +.+.+ .+..++..      -+++.++|+|+|++||+|+.||+|.+|+............-.+|..  .|++++||+ ++
T Consensus       298 v~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~-dg  376 (641)
T KOG0772|consen  298 VNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSY-DG  376 (641)
T ss_pred             cCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEecc-cc
Confidence            98654 33333321      2789999999999999999999999999865444444555667877  899999999 66


Q ss_pred             CEEEEeeCCCcEEEEecC
Q psy2107         374 QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       374 ~~l~s~~~dg~v~iwdlr  391 (391)
                      ++|+|-|.|+++++||||
T Consensus       377 ~~LlSRg~D~tLKvWDLr  394 (641)
T KOG0772|consen  377 NYLLSRGFDDTLKVWDLR  394 (641)
T ss_pred             chhhhccCCCceeeeecc
Confidence            789999999999999997

>KOG0302|consensus

Probab=99.95  E-value=1.9e-26  Score=186.40  Aligned_cols=214  Identities=18%  Similarity=0.343  Sum_probs=175.7

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC------------CCCceeEEEEEecCCCCeEEEEEcCCC-
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV------------ESNSIECIHVCRGHERGLETVTVSESR-  216 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~------------~~~~~~~~~~~~~~~~~v~~l~~~~~~-  216 (391)
                      ...+|.+.++.+.-.+. ++..+.++-+..|.|.||++..            .....+++.++.+|...=..++|+|-. 
T Consensus       146 ~~i~h~g~~NRvr~~~~-~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~  224 (440)
T KOG0302|consen  146 KSIPHYGGINRVRVSRL-GNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKT  224 (440)
T ss_pred             cccccccccceeeeccc-CCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccccc
Confidence            34567888888877543 2456788888999999999641            123456788999999999999999932 


Q ss_pred             CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCeEEEEEC
Q psy2107         217 QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSW  294 (391)
Q Consensus       217 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~  294 (391)
                      ..|++|..-+.|++|...++.-..                          -...+.+|+..|..++|+|  .+.|++||.
T Consensus       225 g~LlsGDc~~~I~lw~~~~g~W~v--------------------------d~~Pf~gH~~SVEDLqWSptE~~vfaScS~  278 (440)
T KOG0302|consen  225 GRLLSGDCVKGIHLWEPSTGSWKV--------------------------DQRPFTGHTKSVEDLQWSPTEDGVFASCSC  278 (440)
T ss_pred             cccccCccccceEeeeeccCceee--------------------------cCccccccccchhhhccCCccCceEEeeec
Confidence            248888888999999987744311                          1223557999999999995  467999999


Q ss_pred             CCeEEEEecccC---ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         295 DHTLKIWDAELG---GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       295 dg~i~iwd~~~~---~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      ||+|+|||++.+   .++.+-.+.+.|+.+.|+....+||+|++||+++|||++.-+...++..+.-|..+|+++.|+|.
T Consensus       279 DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~  358 (440)
T KOG0302|consen  279 DGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPH  358 (440)
T ss_pred             CceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccc
Confidence            999999999988   45555556669999999998889999999999999999987777788899999999999999998


Q ss_pred             CCCEEEEeeCCCcEEEEec
Q psy2107         372 DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....|+++|.|..|.||||
T Consensus       359 e~s~iaasg~D~QitiWDl  377 (440)
T KOG0302|consen  359 EDSVIAASGEDNQITIWDL  377 (440)
T ss_pred             cCceEEeccCCCcEEEEEe
Confidence            8889999999999999997

>KOG0647|consensus

Probab=99.95  E-value=4.7e-25  Score=173.44  Aligned_cols=254  Identities=13%  Similarity=0.158  Sum_probs=194.6

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      +=++++++|..+......+.....|.++|.+++|+  |..+++|+.|+.+++||+...+..++..|.++|.++.|.+. .
T Consensus        47 SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~-~  125 (347)
T KOG0647|consen   47 SWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPG-M  125 (347)
T ss_pred             ccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCeeeeeecccceeEEEEecC-C
Confidence            45889999999886566667777899999999998  77999999999999999987799999999999999999874 3


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ....|++|+.|.+|+.||.+    ...++.++.- ...+.++..  ...+++++..++.|.+|+++++.....       
T Consensus       126 ~~~cl~TGSWDKTlKfWD~R----~~~pv~t~~L-PeRvYa~Dv--~~pm~vVata~r~i~vynL~n~~te~k-------  191 (347)
T KOG0647|consen  126 NYQCLVTGSWDKTLKFWDTR----SSNPVATLQL-PERVYAADV--LYPMAVVATAERHIAVYNLENPPTEFK-------  191 (347)
T ss_pred             CcceeEecccccceeecccC----CCCeeeeeec-cceeeehhc--cCceeEEEecCCcEEEEEcCCCcchhh-------
Confidence            35689999999999999965    3344444442 345666554  345788899999999999976432110       


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccC--ceeEEEECCe---------
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELG--GMKSEIVGNK---------  316 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~---------  316 (391)
                                          .....-.-.++|++.. +....+.|+-+|.+.|..+..+  +.-.++++|.         
T Consensus       192 --------------------~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~V  251 (347)
T KOG0647|consen  192 --------------------RIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDV  251 (347)
T ss_pred             --------------------hhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCce
Confidence                                0001123356788776 4445799999999999998876  4555666553         


Q ss_pred             -eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         317 -SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       317 -~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                       .|++++|+|....|++++.||+..+||-....   .+.....|..+|++.+|+.++..+..+.|.|
T Consensus       252 YaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~---kLk~s~~~~qpItcc~fn~~G~ifaYA~gYD  315 (347)
T KOG0647|consen  252 YAVNSIAFHPVHGTLVTAGSDGTFSFWDKDART---KLKTSETHPQPITCCSFNRNGSIFAYALGYD  315 (347)
T ss_pred             EEecceEeecccceEEEecCCceEEEecchhhh---hhhccCcCCCccceeEecCCCCEEEEEeecc
Confidence             57889999999999999999999999966543   4556677999999999999555444455555

>KOG0289|consensus

Probab=99.95  E-value=6.5e-26  Score=186.51  Aligned_cols=234  Identities=16%  Similarity=0.218  Sum_probs=191.3

Q ss_pred             CcEEEEEecC--CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         117 DWVSAIDFHN--DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       117 ~~V~~~~~~~--~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ..++++...+  +.++||+.|..+.++|. .++.+..+++|...|+.+.|   +++...+++++.|..|++|.....   
T Consensus       220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~---~~~~~~v~~aSad~~i~vws~~~~---  293 (506)
T KOG0289|consen  220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKF---HKDLDTVITASADEIIRVWSVPLS---  293 (506)
T ss_pred             CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEe---ccchhheeecCCcceEEeeccccc---
Confidence            3567777764  79999999999999998 55667789999999999999   667788999999999999985422   


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-  272 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  272 (391)
                       ........|..+|+.+..+|.|.||++++.||...+.|++++..                             +.... 
T Consensus       294 -s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~-----------------------------lt~vs~  343 (506)
T KOG0289|consen  294 -SEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQ-----------------------------LTVVSD  343 (506)
T ss_pred             -cCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcE-----------------------------EEEEee
Confidence             24556678999999999999999999999999999999987553                             22222 


Q ss_pred             -CccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107         273 -GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG  349 (391)
Q Consensus       273 -~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~  349 (391)
                       ...-.+++.+|+|++. |.+|+.||.|+|||+.++.....|.+|. +|..++|+.+|-||+++++|+.|++||+|..+.
T Consensus       344 ~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n  423 (506)
T KOG0289|consen  344 ETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN  423 (506)
T ss_pred             ccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc
Confidence             2334589999998887 6788899999999999999998998876 999999999999999999999999999987652


Q ss_pred             ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .... .+ .....|.++.|.+ .+.+|+.+|.|=.|++++
T Consensus       424 ~kt~-~l-~~~~~v~s~~fD~-SGt~L~~~g~~l~Vy~~~  460 (506)
T KOG0289|consen  424 FKTI-QL-DEKKEVNSLSFDQ-SGTYLGIAGSDLQVYICK  460 (506)
T ss_pred             ccee-ec-cccccceeEEEcC-CCCeEEeecceeEEEEEe
Confidence            2211 22 2234799999999 667888888877776654

>KOG0643|consensus

Probab=99.95  E-value=1.7e-25  Score=172.93  Aligned_cols=203  Identities=20%  Similarity=0.348  Sum_probs=171.1

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLL  228 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i  228 (391)
                      ..+.+|..+++.+.|   +.+|.+|++|+.|.+..+|--    .+++.+-++.+|++.|.|+..+-+.+++++|+.|.++
T Consensus         4 i~l~GHERplTqiKy---N~eGDLlFscaKD~~~~vw~s----~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~   76 (327)
T KOG0643|consen    4 ILLQGHERPLTQIKY---NREGDLLFSCAKDSTPTVWYS----LNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTA   76 (327)
T ss_pred             cccccCccccceEEe---cCCCcEEEEecCCCCceEEEe----cCCceeeeecCCCceEEEEEecCCcceeeecccccee
Confidence            346789999999999   889999999999999999972    3567889999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC------CCeEEEEe
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW------DHTLKIWD  302 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~------dg~i~iwd  302 (391)
                      ++||+++++                             .+..++ -..+|..+.|+.++.++..+.      .+.|.++|
T Consensus        77 kLWDv~tGk-----------------------------~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fd  126 (327)
T KOG0643|consen   77 KLWDVETGK-----------------------------QLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFD  126 (327)
T ss_pred             EEEEcCCCc-----------------------------EEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEE
Confidence            999998865                             455554 367899999996666544443      36799999


Q ss_pred             ccc-------CceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         303 AEL-------GGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       303 ~~~-------~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      ++.       ..+...+..+ +.++.+.|.|.+++|++|..||.|.+||++++.  ..+.....|...|+.|.+++ +..
T Consensus       127 i~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~--~~v~s~~~h~~~Ind~q~s~-d~T  203 (327)
T KOG0643|consen  127 IRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGK--ELVDSDEEHSSKINDLQFSR-DRT  203 (327)
T ss_pred             ccCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCc--eeeechhhhccccccccccC-Ccc
Confidence            983       3445555544 489999999999999999999999999998743  35666678999999999999 677


Q ss_pred             EEEEeeCCCcEEEEecC
Q psy2107         375 LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdlr  391 (391)
                      +++|++.|.+-++||++
T Consensus       204 ~FiT~s~Dttakl~D~~  220 (327)
T KOG0643|consen  204 YFITGSKDTTAKLVDVR  220 (327)
T ss_pred             eEEecccCccceeeecc
Confidence            89999999999999974

>KOG2096|consensus

Probab=99.95  E-value=1.5e-25  Score=177.51  Aligned_cols=245  Identities=18%  Similarity=0.270  Sum_probs=176.9

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce------EE-ec-----------------------------
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH------KL-NI-----------------------------  151 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~------~~-~~-----------------------------  151 (391)
                      ..+.+|.+.|++++|+  |+.|+|++.|++|+||+++...      +. .+                             
T Consensus        80 ~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~v  159 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCV  159 (420)
T ss_pred             hhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEE
Confidence            4567899999999997  8899999999999999873210      00 00                             


Q ss_pred             ------------------------cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107         152 ------------------------PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL  207 (391)
Q Consensus       152 ------------------------~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v  207 (391)
                                              ..|.-.+..+-.   ...+.+|++++.|..|.+|++.     ++.+..+......-
T Consensus       160 yk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGi---A~~~k~imsas~dt~i~lw~lk-----Gq~L~~idtnq~~n  231 (420)
T KOG2096|consen  160 YKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGI---AGNAKYIMSASLDTKICLWDLK-----GQLLQSIDTNQSSN  231 (420)
T ss_pred             EEeeecccCCCCcccccccccccchhcccceEEEee---cCCceEEEEecCCCcEEEEecC-----Cceeeeeccccccc
Confidence                                    012222222222   4467789999999999999953     34556666556666


Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-
Q psy2107         208 ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-  286 (391)
Q Consensus       208 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-  286 (391)
                      +..+.+|+|+++++++.---+++|.+--++.-.                     ...-..+..+++|+..|..++|+++ 
T Consensus       232 ~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~---------------------fqev~rvf~LkGH~saV~~~aFsn~S  290 (420)
T KOG2096|consen  232 YDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGT---------------------FQEVKRVFSLKGHQSAVLAAAFSNSS  290 (420)
T ss_pred             cceeeCCCCcEEEEecCCCCceEEEEEeccCcc---------------------hhhhhhhheeccchhheeeeeeCCCc
Confidence            778899999999999998899999975432100                     0112356788999999999999955 


Q ss_pred             CeEEEEECCCeEEEEeccc-------CceeEEEEC-----CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         287 DEIITSSWDHTLKIWDAEL-------GGMKSEIVG-----NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       287 ~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~-----~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      .++++.+.||++++||+.-       .+.+.+...     ......++++|.|+.||.+. ...+++|..++++....  
T Consensus       291 ~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~--  367 (420)
T KOG2096|consen  291 TRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPE--  367 (420)
T ss_pred             ceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchh--
Confidence            5699999999999999752       222333211     12344899999999998765 66799999887553222  


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .-..|...|.+++|++ ++++++||| |..+++.
T Consensus       368 ~e~~h~~~Is~is~~~-~g~~~atcG-dr~vrv~  399 (420)
T KOG2096|consen  368 LEDIHSTTISSISYSS-DGKYIATCG-DRYVRVI  399 (420)
T ss_pred             HHHhhcCceeeEEecC-CCcEEeeec-ceeeeee
Confidence            2346899999999999 667899888 6677775

>KOG0268|consensus

Probab=99.95  E-value=3.1e-26  Score=184.32  Aligned_cols=259  Identities=17%  Similarity=0.230  Sum_probs=197.8

Q ss_pred             HcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEec
Q psy2107          87 SKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~  166 (391)
                      ....+.++.+.+|.......  ...+..|.+.|..|+++...+++++.|.+|+.|.+.+....++.+ ...+..+.-   
T Consensus        82 ~aSGs~DG~VkiWnlsqR~~--~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~~p~~tilg-~s~~~gIdh---  155 (433)
T KOG0268|consen   82 VASGSCDGEVKIWNLSQREC--IRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDGPPLHTILG-KSVYLGIDH---  155 (433)
T ss_pred             hhccccCceEEEEehhhhhh--hheeecccCceeeEEecccceEEecCCcceeeeeccCCcceeeec-ccccccccc---
Confidence            34457899999998754332  345556999999999999999999999999999998876666654 344556665   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                      ...++.+++|+.  .|.|||..    ...++..+.-....|.++.|+|.. ..|++++.|+.|.+||+++...       
T Consensus       156 ~~~~~~FaTcGe--~i~IWD~~----R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~P-------  222 (433)
T KOG0268|consen  156 HRKNSVFATCGE--QIDIWDEQ----RDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQASP-------  222 (433)
T ss_pred             ccccccccccCc--eeeecccc----cCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCCc-------
Confidence            445667888876  48899954    335666776667889999999965 5677788999999999988553       


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEE
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVH  322 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~  322 (391)
                                            +..+. -...-..++|+|... +++++.|..++.||++.- .++.....|. .+.++.
T Consensus       223 ----------------------l~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVd  279 (433)
T KOG0268|consen  223 ----------------------LKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVD  279 (433)
T ss_pred             ----------------------cceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEEEec
Confidence                                  22221 123346799998665 888999999999999864 3555555554 899999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+|.|+-+++||.|.+|+||..+.+...-...  ...-..|.++.||. +.++++|||+|+.|++|.-
T Consensus       280 fsptG~EfvsgsyDksIRIf~~~~~~SRdiYh--tkRMq~V~~Vk~S~-Dskyi~SGSdd~nvRlWka  344 (433)
T KOG0268|consen  280 FSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH--TKRMQHVFCVKYSM-DSKYIISGSDDGNVRLWKA  344 (433)
T ss_pred             cCCCcchhccccccceEEEeecCCCcchhhhh--HhhhheeeEEEEec-cccEEEecCCCcceeeeec
Confidence            99999999999999999999987654222211  11224599999999 7789999999999999963

>KOG0302|consensus

Probab=99.94  E-value=3.7e-25  Score=179.01  Aligned_cols=245  Identities=20%  Similarity=0.359  Sum_probs=187.0

Q ss_pred             CcccCCCCcEEEEEec--CC--EEEEEECCCeEEEEcCCC-----------------ceEEeccCCCCCeeEEEEEecCC
Q psy2107         110 LDCILHDDWVSAIDFH--ND--WILTGCYDHSVHIWTRRG-----------------EHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~--~l~t~~~dg~i~iwd~~~-----------------~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      .....|.+.|+.+...  ++  +.++-+..|.|+||++..                 ..+.++.+|.+.-++++|+|.  
T Consensus       145 ~~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~--  222 (440)
T KOG0302|consen  145 MKSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPI--  222 (440)
T ss_pred             ccccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeecccc--
Confidence            4455687777777665  33  667778889999998631                 345567799999999999774  


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeE-EEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIEC-IHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                      ....|++|..-+.|++|....  +.+.. ...+.+|+..|..++|+|. ...|++||.||+|+|||++.+..        
T Consensus       223 ~~g~LlsGDc~~~I~lw~~~~--g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~--------  292 (440)
T KOG0302|consen  223 KTGRLLSGDCVKGIHLWEPST--GSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPK--------  292 (440)
T ss_pred             cccccccCccccceEeeeecc--CceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCc--------
Confidence            334588888889999998653  33332 2456679999999999995 46789999999999999987542        


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEeccc---CceeEEEECCe-eeEEE
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL---GGMKSEIVGNK-SFFDV  321 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~-~i~~~  321 (391)
                                         +.....+.|.+.|+.+.|+ ....|++|+.||+++|||+++   ++++..++.|. +|+++
T Consensus       293 -------------------~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsi  353 (440)
T KOG0302|consen  293 -------------------KAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSI  353 (440)
T ss_pred             -------------------cceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEE
Confidence                               2344458999999999999 445799999999999999985   56778887766 99999


Q ss_pred             EECCC-CCEEEEeeCCCcEEEEcCCCCCc------c-------eEEEEeccc--cCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         322 HYSPL-SKLVITASADKQIRLYDPKVKEG------A-------IVKSTFSSH--KEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       322 ~~~p~-~~~l~~g~~dg~i~iwd~~~~~~------~-------~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      .|+|. ...|++++.|..|.+||+.....      .       .+.+.+.-|  ...|..+.|++.-+-++++.+.||.-
T Consensus       354 eW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfn  433 (440)
T KOG0302|consen  354 EWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFN  433 (440)
T ss_pred             EeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEeccccee
Confidence            99997 45788888999999999865321      0       011122224  34689999999888899999999753

>KOG0639|consensus

Probab=99.94  E-value=3.4e-26  Score=191.57  Aligned_cols=240  Identities=16%  Similarity=0.269  Sum_probs=197.2

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc----eEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE----HKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~----~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      ..+.|.+-|.++..+  .+.++||+. |.|+|||++..    .+..+.  .....|+++..   .++++.|++|+.-.++
T Consensus       414 ~tL~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL---~pdgrtLivGGeastl  489 (705)
T KOG0639|consen  414 NTLAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKL---LPDGRTLIVGGEASTL  489 (705)
T ss_pred             hhhccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEe---cCCCceEEecccccee
Confidence            345699999999998  458888876 78999999432    222222  34567888888   6689999999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      .|||+...+.  .....+..-.-...+++.+||.+..+++..||.|.|||+.+                           
T Consensus       490 siWDLAapTp--rikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhn---------------------------  540 (705)
T KOG0639|consen  490 SIWDLAAPTP--RIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHN---------------------------  540 (705)
T ss_pred             eeeeccCCCc--chhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEccc---------------------------
Confidence            9999764433  33334443345677899999999999999999999999976                           


Q ss_pred             CCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                        ...+..+++|...+.||..++++ .|.+|+-|.+||.||++.+..+......+.|.++.++|.+.+|++|-.++.+.|
T Consensus       541 --q~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMens~vev  618 (705)
T KOG0639|consen  541 --QTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMENSNVEV  618 (705)
T ss_pred             --ceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeecccCcEEE
Confidence              45788899999999999999555 599999999999999999999888888889999999999999999999999999


Q ss_pred             EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ......+    ...+.-|.+.|.++.|.+ .++++++.|.|+.+..|..
T Consensus       619 lh~skp~----kyqlhlheScVLSlKFa~-cGkwfvStGkDnlLnawrt  662 (705)
T KOG0639|consen  619 LHTSKPE----KYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRT  662 (705)
T ss_pred             EecCCcc----ceeecccccEEEEEEecc-cCceeeecCchhhhhhccC
Confidence            8865433    345667999999999999 7789999999999999964

>KOG1408|consensus

Probab=99.94  E-value=1.2e-25  Score=195.92  Aligned_cols=245  Identities=17%  Similarity=0.241  Sum_probs=199.3

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      -+..|.|++.+  ++.||+|..-|+++||++ +-.....+..|...|.|+.|+...-..++||+++.|.-|.+||..   
T Consensus       458 ~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~---  534 (1080)
T KOG1408|consen  458 SRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVK---  534 (1080)
T ss_pred             cccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecc---
Confidence            34578888887  779999999999999999 445566778999999999996544456799999999999999964   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESR--QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      .+..++.++.+|...|+++.|..+|  ..+++++.|+.|.+ +........                       ..-+..
T Consensus       535 rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimF-r~~qk~~~g-----------------------~~f~r~  590 (1080)
T KOG1408|consen  535 RNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF-RVNQKASSG-----------------------RLFPRH  590 (1080)
T ss_pred             cccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhe-ehhccccCc-----------------------eecccc
Confidence            4667888999999999999998877  77899999988764 332211000                       000011


Q ss_pred             eecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECC----eeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         270 TLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGN----KSFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      +-......+..|+..|. +++++++.|..|+|||+.+++..+.|++.    +....+...|.|.||++.+.|.++.++|.
T Consensus       591 t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df  670 (1080)
T KOG1408|consen  591 TQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDF  670 (1080)
T ss_pred             ccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEe
Confidence            11112345778888854 56999999999999999999999999864    36778999999999999999999999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+++   ++....||...|+.+.|.+ +.+.|++.+.||.|.||.+
T Consensus       671 ~sgE---cvA~m~GHsE~VTG~kF~n-DCkHlISvsgDgCIFvW~l  712 (1080)
T KOG1408|consen  671 VSGE---CVAQMTGHSEAVTGVKFLN-DCKHLISVSGDGCIFVWKL  712 (1080)
T ss_pred             ccch---hhhhhcCcchheeeeeecc-cchhheeecCCceEEEEEC
Confidence            9888   8899999999999999999 6678999999999999986

>KOG1407|consensus

Probab=99.94  E-value=7.4e-25  Score=168.93  Aligned_cols=228  Identities=19%  Similarity=0.253  Sum_probs=190.8

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEc
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWT  142 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd  142 (391)
                      ....|..+|.-|+.          .+.++.+.+|..............+|.+.|-.++++   ++.+++++.|.+|++||
T Consensus        24 ~Sv~wn~~g~~las----------gs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd   93 (313)
T KOG1407|consen   24 HSVAWNCDGTKLAS----------GSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD   93 (313)
T ss_pred             eEEEEcccCceeee----------cccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence            55788999977775          567889999998887666677888999999999997   67999999999999999


Q ss_pred             C-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-------------------------------
Q psy2107         143 R-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-------------------------------  190 (391)
Q Consensus       143 ~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-------------------------------  190 (391)
                      . .+++........+.+ -+.|   +|++.+++.++.|..|.+.|.+..                               
T Consensus        94 ~r~~k~~~~i~~~~eni-~i~w---sp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~GlG  169 (313)
T KOG1407|consen   94 IRSGKCTARIETKGENI-NITW---SPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNGLG  169 (313)
T ss_pred             eccCcEEEEeeccCcce-EEEE---cCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecCCc
Confidence            9 566666655444444 4677   678888999999888888875311                               


Q ss_pred             ------CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         191 ------SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       191 ------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                            -...+++..++.|.....|+.|+|+|++||+|+.|..+.+||++.                             
T Consensus       170 ~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E-----------------------------  220 (313)
T KOG1407|consen  170 CVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDE-----------------------------  220 (313)
T ss_pred             eEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhH-----------------------------
Confidence                  012345566778999999999999999999999999999999965                             


Q ss_pred             CCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC
Q psy2107         265 RTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d  336 (391)
                      .-++..+..+.-+|..+.|+ ++.+|+++|.|..|-|=++++|..+..+++.++...++|+|...+||-+++|
T Consensus       221 LiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~dd  293 (313)
T KOG1407|consen  221 LICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDD  293 (313)
T ss_pred             hhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecC
Confidence            45777888899999999999 6667999999999999999999999999999999999999999999887765

>KOG4283|consensus

Probab=99.94  E-value=6.2e-25  Score=172.28  Aligned_cols=199  Identities=19%  Similarity=0.333  Sum_probs=159.3

Q ss_pred             CCCCcEEEEEec---CCEEEEEECCCeEEEEcCCCce-------E----E-----eccCCCCCeeEEEEEecCCCCeEEE
Q psy2107         114 LHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRGEH-------K----L-----NIPGHGGPVKGVAWLYNDGKDAAFI  174 (391)
Q Consensus       114 ~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~-------~----~-----~~~~~~~~v~~l~~~~~~~~~~~l~  174 (391)
                      .|.+.|+++...   |+++++|+.||.|.+||++...       +    .     .-.+|.-.|..+.|.|.  +...+.
T Consensus        41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~--DtGmFt  118 (397)
T KOG4283|consen   41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPI--DTGMFT  118 (397)
T ss_pred             cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeee--cCceee
Confidence            489999999997   8899999999999999984211       0    0     12368889999999997  667899


Q ss_pred             EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      +++.|.++++||.+    +.+....|. ..+.|.+-+++|-   .-++|+|..|-.|++.|+..                
T Consensus       119 ssSFDhtlKVWDtn----TlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~S----------------  177 (397)
T KOG4283|consen  119 SSSFDHTLKVWDTN----TLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIAS----------------  177 (397)
T ss_pred             cccccceEEEeecc----cceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccC----------------
Confidence            99999999999944    334444443 3567888888883   45788899999999999976                


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCCe--EEEEECCCeEEEEecccC-ceeEEEE---------------
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELG-GMKSEIV---------------  313 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~~~~-~~~~~~~---------------  313 (391)
                                   ...-+++.+|...|.++.|+|...  |++|+.||.|++||++.. .+...+.               
T Consensus       178 -------------Gs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~a  244 (397)
T KOG4283|consen  178 -------------GSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTA  244 (397)
T ss_pred             -------------CcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCcccccccc
Confidence                         446788999999999999997554  889999999999999854 3333332               


Q ss_pred             CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         314 GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       314 ~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      +.+.+..++|+.++.++++.+.|..+++|+...+.
T Consensus       245 h~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~  279 (397)
T KOG4283|consen  245 HYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR  279 (397)
T ss_pred             ccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence            22468999999999999999999999999986543

>KOG0278|consensus

Probab=99.94  E-value=5.9e-27  Score=179.37  Aligned_cols=231  Identities=16%  Similarity=0.182  Sum_probs=186.7

Q ss_pred             CcccCCCCcEEEEEecCC--EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFHND--WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~~--~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      -++.+|.+.|.....+.+  ..|+++.|=+-+|||. ++..+..+. |..-|.+++|   +.+.++|++|+.+..+||||
T Consensus        53 gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af---~~ds~~lltgg~ekllrvfd  128 (334)
T KOG0278|consen   53 GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAF---SQDSNYLLTGGQEKLLRVFD  128 (334)
T ss_pred             EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEe---cccchhhhccchHHHhhhhh
Confidence            345689999999999854  7888899999999998 777777765 8899999999   88899999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCC-----------CCCCcccccc
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSEN-----------GDEGTTSKKR  255 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-----------~~~~~~~~~~  255 (391)
                      ++...   .+...+.+|.+.|..+.|....+.|++.+.|+.|++||.+++.....+..+           +.........
T Consensus       129 ln~p~---App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gs  205 (334)
T KOG0278|consen  129 LNRPK---APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGS  205 (334)
T ss_pred             ccCCC---CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCc
Confidence            76433   345678899999999999999999999999999999999998876544222           2222233344


Q ss_pred             ccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEE-E-CCeeeEEEEECCCCCEEEE
Q psy2107         256 KKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEI-V-GNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~-~-~~~~i~~~~~~p~~~~l~~  332 (391)
                      ...+++......+...+. ...|.+.+.+|. +.+++|+.|..++.||..++..+..+ + ++++|.|+.|+|+|...++
T Consensus       206 sV~Fwdaksf~~lKs~k~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAs  284 (334)
T KOG0278|consen  206 SVKFWDAKSFGLLKSYKM-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYAS  284 (334)
T ss_pred             eeEEeccccccceeeccC-ccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeec
Confidence            445666666666665543 345778888865 45888899999999999999988775 4 4459999999999999999


Q ss_pred             eeCCCcEEEEcCCCCC
Q psy2107         333 ASADKQIRLYDPKVKE  348 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~  348 (391)
                      |+.||+|++|.....+
T Consensus       285 GSEDGTirlWQt~~~~  300 (334)
T KOG0278|consen  285 GSEDGTIRLWQTTPGK  300 (334)
T ss_pred             cCCCceEEEEEecCCC
Confidence            9999999999986654

>KOG0640|consensus

Probab=99.94  E-value=1.3e-25  Score=177.38  Aligned_cols=208  Identities=18%  Similarity=0.289  Sum_probs=166.5

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC--------------CCCceeEEEEEecCCCCeEEEEEcC
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV--------------ESNSIECIHVCRGHERGLETVTVSE  214 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~--------------~~~~~~~~~~~~~~~~~v~~l~~~~  214 (391)
                      ..+..|.+++.+.+|   +++|.++++|+.|..|+|.|++.              .......++++..|...|+++.|+|
T Consensus       106 ~ylt~HK~~cR~aaf---s~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHP  182 (430)
T KOG0640|consen  106 KYLTSHKSPCRAAAF---SPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHP  182 (430)
T ss_pred             EEEeecccceeeeee---CCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecc
Confidence            345679999999999   88999999999999999999651              0111245778889999999999999


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEE
Q psy2107         215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSS  293 (391)
Q Consensus       215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~  293 (391)
                      ....|++|+.|++|+++|+.....                          .+....+ ....+|.++.|+|.|. ++.|.
T Consensus       183 re~ILiS~srD~tvKlFDfsK~sa--------------------------KrA~K~~-qd~~~vrsiSfHPsGefllvgT  235 (430)
T KOG0640|consen  183 RETILISGSRDNTVKLFDFSKTSA--------------------------KRAFKVF-QDTEPVRSISFHPSGEFLLVGT  235 (430)
T ss_pred             hhheEEeccCCCeEEEEecccHHH--------------------------HHHHHHh-hccceeeeEeecCCCceEEEec
Confidence            999999999999999999965221                          1111222 3457899999998765 67777


Q ss_pred             CCCeEEEEecccCceeEEEE----CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe-cccc-CcEEEEE
Q psy2107         294 WDHTLKIWDAELGGMKSEIV----GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF-SSHK-EWVQSVR  367 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~----~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~h~-~~v~~~~  367 (391)
                      ...++++||+.+.++...-.    +...|+++.+++.|++.++|+.||.|++||--...   ++.++ .+|. ..|.+..
T Consensus       236 dHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r---Cv~t~~~AH~gsevcSa~  312 (430)
T KOG0640|consen  236 DHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR---CVRTIGNAHGGSEVCSAV  312 (430)
T ss_pred             CCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHH---HHHHHHhhcCCceeeeEE
Confidence            78899999999988765543    23489999999999999999999999999965443   44443 3454 4688999


Q ss_pred             ECCCCCCEEEEeeCCCcEEEEec
Q psy2107         368 WSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       368 ~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |.. +++++++.|.|..|++|.+
T Consensus       313 Ftk-n~kyiLsSG~DS~vkLWEi  334 (430)
T KOG0640|consen  313 FTK-NGKYILSSGKDSTVKLWEI  334 (430)
T ss_pred             Ecc-CCeEEeecCCcceeeeeee
Confidence            998 7789999999999999987

>KOG1036|consensus

Probab=99.94  E-value=6.6e-24  Score=167.59  Aligned_cols=245  Identities=16%  Similarity=0.144  Sum_probs=185.4

Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEEEEEecC-CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCe
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN-DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA  171 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~  171 (391)
                      ++.+++......   .....+.|..++.+.+|.+ ..+++|+.||.|+.+|+.+.....+..|..+|.|+.+++   ...
T Consensus        34 DgslrlYdv~~~---~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~~igth~~~i~ci~~~~---~~~  107 (323)
T KOG1036|consen   34 DGSLRLYDVPAN---SLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNEDQIGTHDEGIRCIEYSY---EVG  107 (323)
T ss_pred             cCcEEEEeccch---hhhhheecCCceeeeeccCCceEEEeccCceEEEEEecCCcceeeccCCCceEEEEeec---cCC
Confidence            455566555443   3445566999999999984 599999999999999998888888889999999999954   456


Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      .+++|+.|++|++||.+.    ......+. ....|.++..+  ++.|++|+.|..+.+||+++.....           
T Consensus       108 ~vIsgsWD~~ik~wD~R~----~~~~~~~d-~~kkVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~-----------  169 (323)
T KOG1036|consen  108 CVISGSWDKTIKFWDPRN----KVVVGTFD-QGKKVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPF-----------  169 (323)
T ss_pred             eEEEcccCccEEEEeccc----cccccccc-cCceEEEEecc--CCEEEEeecCceEEEEEcccccchh-----------
Confidence            799999999999999652    12223333 23478887765  5679999999999999998744311           


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccC----ceeEEEECC----------e
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELG----GMKSEIVGN----------K  316 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~----~~~~~~~~~----------~  316 (391)
                                      ...-..-.-++.|++..|++. +++++-||.|.+=.+...    .....|++|          .
T Consensus       170 ----------------q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~y  233 (323)
T KOG1036|consen  170 ----------------QRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIY  233 (323)
T ss_pred             ----------------hhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEE
Confidence                            011112345688999887554 888999999998666554    344556655          2


Q ss_pred             eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         317 SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      +|++++|+|-...|+||+.||.|.+||+...+   .+..+......|.+++|+. ++..||.++.
T Consensus       234 PVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rK---rl~q~~~~~~SI~slsfs~-dG~~LAia~s  294 (323)
T KOG1036|consen  234 PVNAIAFHPIHGTFATGGSDGIVNIWDLFNRK---RLKQLAKYETSISSLSFSM-DGSLLAIASS  294 (323)
T ss_pred             EeceeEeccccceEEecCCCceEEEccCcchh---hhhhccCCCCceEEEEecc-CCCeEEEEec
Confidence            79999999999999999999999999998766   4455655667799999999 5556777763

>KOG0267|consensus

Probab=99.94  E-value=9.2e-27  Score=202.87  Aligned_cols=231  Identities=22%  Similarity=0.411  Sum_probs=200.2

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      ...|...|.|+..-  ++.+++|+.|-.+-+|.. ....+..+.+|..+|.++.|   +....+|++|+.+|+|++||++
T Consensus        24 ~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f---~~~E~LlaagsasgtiK~wDle  100 (825)
T KOG0267|consen   24 FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTF---DTSERLLAAGSASGTIKVWDLE  100 (825)
T ss_pred             hhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeec---CcchhhhcccccCCceeeeehh
Confidence            33488888888753  789999999999999998 55566678999999999999   7778899999999999999976


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                          ....++++.+|...+.++.|+|.+.++++|+.|+.+++||.+.                             ..+.
T Consensus       101 ----eAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk-----------------------------~Gc~  147 (825)
T KOG0267|consen  101 ----EAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRK-----------------------------KGCS  147 (825)
T ss_pred             ----hhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhc-----------------------------cCce
Confidence                4466788999999999999999999999999999999999975                             4578


Q ss_pred             eeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         269 ITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ..+.+|...|.++.|+|+| +++.++.|.+++|||+..|+.+..|..|. .+..+.|+|..-+++.|+.|+++++||+++
T Consensus       148 ~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dlet  227 (825)
T KOG0267|consen  148 HTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLET  227 (825)
T ss_pred             eeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccce
Confidence            8888999999999999888 57888889999999999999999999554 899999999999999999999999999986


Q ss_pred             CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      -.   ++.........|.+++|+| ++..+.+|..+
T Consensus       228 fe---~I~s~~~~~~~v~~~~fn~-~~~~~~~G~q~  259 (825)
T KOG0267|consen  228 FE---VISSGKPETDGVRSLAFNP-DGKIVLSGEQI  259 (825)
T ss_pred             eE---EeeccCCccCCceeeeecC-CceeeecCchh
Confidence            54   6666666678899999999 55567766544

>KOG0305|consensus

Probab=99.94  E-value=1.2e-24  Score=188.12  Aligned_cols=219  Identities=17%  Similarity=0.342  Sum_probs=182.0

Q ss_pred             CCccceEEEEEEeccCCCCCCcccC-CCCcEEEEEecCCEEEEEECCCeEEEEcCC-CceEE-eccCCCCCeeEEEEEec
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCIL-HDDWVSAIDFHNDWILTGCYDHSVHIWTRR-GEHKL-NIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~-~~~~~~~~v~~l~~~~~  166 (391)
                      ....+.+.+|+.......  ....+ |...|-|++|++..+.+|+.||.|..+|+. .+... .+.+|...|..++|   
T Consensus       235 G~~~g~v~iwD~~~~k~~--~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkw---  309 (484)
T KOG0305|consen  235 GTSDGTVQIWDVKEQKKT--RTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKW---  309 (484)
T ss_pred             eecCCeEEEEehhhcccc--ccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEE---
Confidence            356788899998766553  33445 999999999999999999999999999983 33333 48899999999999   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEe--CCCcEEEEECCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGG--WDCLLKIWSADISKERGDPS  243 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~  243 (391)
                      ++++.++|+|+.|+.+.|||.    ....+...+..|...|.+++|+| ...+||+|+  .|+.|++||..++..     
T Consensus       310 s~d~~~lASGgnDN~~~Iwd~----~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-----  380 (484)
T KOG0305|consen  310 SPDGNQLASGGNDNVVFIWDG----LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-----  380 (484)
T ss_pred             CCCCCeeccCCCccceEeccC----CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-----
Confidence            789999999999999999995    24567788889999999999999 567888875  699999999987443     


Q ss_pred             CCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEE--ECCCeEEEEecccCceeEEEECCe-eeE
Q psy2107         244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITS--SWDHTLKIWDAELGGMKSEIVGNK-SFF  319 (391)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~-~i~  319 (391)
                                              +..+. -...|..+.|++. +.|+++  ..+..|.||+..+.+.+..+.+|. .|.
T Consensus       381 ------------------------i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl  435 (484)
T KOG0305|consen  381 ------------------------IDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVL  435 (484)
T ss_pred             ------------------------ecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeE
Confidence                                    33332 4678999999954 456665  357789999999999999988886 899


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         320 DVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      .++++|+|..+++|+.|.++++|++-..
T Consensus       436 ~la~SPdg~~i~t~a~DETlrfw~~f~~  463 (484)
T KOG0305|consen  436 YLALSPDGETIVTGAADETLRFWNLFDE  463 (484)
T ss_pred             EEEECCCCCEEEEecccCcEEeccccCC
Confidence            9999999999999999999999998653

>KOG1274|consensus

Probab=99.94  E-value=4e-24  Score=191.34  Aligned_cols=238  Identities=18%  Similarity=0.329  Sum_probs=189.8

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      .|...-+.|+|.  |++|++++.||.|++|+. .. .....+..++..|.+++.     ...+|++|+.+++|.+|.+..
T Consensus        11 aht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~-----~s~~f~~~s~~~tv~~y~fps   85 (933)
T KOG1274|consen   11 AHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIAC-----YSNHFLTGSEQNTVLRYKFPS   85 (933)
T ss_pred             hccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEee-----cccceEEeeccceEEEeeCCC
Confidence            588888999997  789999999999999987 22 333344448888888887     556899999999999998653


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      .... ..+.   ...-++.+++|+.+|++++.||.|-.|++-++..                             .....
T Consensus        86 ~~~~-~iL~---Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D-----------------------------~s~~~  132 (933)
T KOG1274|consen   86 GEED-TILA---RFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDD-----------------------------SSQEK  132 (933)
T ss_pred             CCcc-ceee---eeeccceEEEEecCCcEEEeecCceeEEEEeccc-----------------------------cchhe
Confidence            2221 1222   3356899999999999999999999999999876                             34567


Q ss_pred             eecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC---------CeeeEEEEECCCCCEEEEeeCCCcE
Q psy2107         270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG---------NKSFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~---------~~~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                      .+.+|..+|.++.|+|.+. |++.+.||.|++||+.++.+..++..         ...+..++|+|+|..++....|+.|
T Consensus       133 ~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~V  212 (933)
T KOG1274|consen  133 VLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTV  212 (933)
T ss_pred             eecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeE
Confidence            8899999999999997655 77788999999999999988777653         2256779999998888888889999


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+|+.........+ ....+...+..++|+| ++.+||+++.||.|.|||..
T Consensus       213 kvy~r~~we~~f~L-r~~~~ss~~~~~~wsP-nG~YiAAs~~~g~I~vWnv~  262 (933)
T KOG1274|consen  213 KVYSRKGWELQFKL-RDKLSSSKFSDLQWSP-NGKYIAASTLDGQILVWNVD  262 (933)
T ss_pred             EEEccCCceeheee-cccccccceEEEEEcC-CCcEEeeeccCCcEEEEecc
Confidence            99998765522222 2223445599999999 68899999999999999973

>KOG1274|consensus

Probab=99.93  E-value=7.8e-24  Score=189.54  Aligned_cols=260  Identities=18%  Similarity=0.226  Sum_probs=203.5

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEecc-CCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLEST-PTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-  143 (391)
                      ....|-++|+++.+          ..+++.+++|..... ..|  ..+..|...|.+++....+|++|+.+++|.+|.. 
T Consensus        17 t~i~~d~~gefi~t----------cgsdg~ir~~~~~sd~e~P--~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fp   84 (933)
T KOG1274|consen   17 TLICYDPDGEFICT----------CGSDGDIRKWKTNSDEEEP--ETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFP   84 (933)
T ss_pred             EEEEEcCCCCEEEE----------ecCCCceEEeecCCcccCC--chhhccCceeEEEeecccceEEeeccceEEEeeCC
Confidence            45677788887765          347888999877655 333  3333388999999999899999999999999998 


Q ss_pred             CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      ++..-..+....-++++++|   +.+|.++|.|+.|-.|++-+..    .......+.+|.++|.++.|+|++++||+.+
T Consensus        85 s~~~~~iL~Rftlp~r~~~v---~g~g~~iaagsdD~~vK~~~~~----D~s~~~~lrgh~apVl~l~~~p~~~fLAvss  157 (933)
T KOG1274|consen   85 SGEEDTILARFTLPIRDLAV---SGSGKMIAAGSDDTAVKLLNLD----DSSQEKVLRGHDAPVLQLSYDPKGNFLAVSS  157 (933)
T ss_pred             CCCccceeeeeeccceEEEE---ecCCcEEEeecCceeEEEEecc----ccchheeecccCCceeeeeEcCCCCEEEEEe
Confidence            44443355566788999999   7889999999999999999854    3345677889999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccC-CeEEEEECCCeEEEE
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAV-DEIITSSWDHTLKIW  301 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-~~l~s~~~dg~i~iw  301 (391)
                      .||.|++||+.++........                      ....... ....+..++|+|. +.++..+.|+.|++|
T Consensus       158 ~dG~v~iw~~~~~~~~~tl~~----------------------v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy  215 (933)
T KOG1274|consen  158 CDGKVQIWDLQDGILSKTLTG----------------------VDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVY  215 (933)
T ss_pred             cCceEEEEEcccchhhhhccc----------------------CCccccccccceeeeeeecCCCCeEEeeccCCeEEEE
Confidence            999999999987554321100                      0000011 1456788999976 779999999999999


Q ss_pred             ecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCC
Q psy2107         302 DAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDP  373 (391)
Q Consensus       302 d~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  373 (391)
                      +.........+...   ..+.+++|+|.|+|||+++.||.|.|||..+..   .    ......|.+++|.|+.+
T Consensus       216 ~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t~~---~----~~~~~~Vc~~aw~p~~n  283 (933)
T KOG1274|consen  216 SRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDTHE---R----HEFKRAVCCEAWKPNAN  283 (933)
T ss_pred             ccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEecccch---h----ccccceeEEEecCCCCC
Confidence            99999888887653   358999999999999999999999999987632   1    22345799999999544

>KOG0321|consensus

Probab=99.93  E-value=1.8e-24  Score=186.15  Aligned_cols=256  Identities=16%  Similarity=0.265  Sum_probs=183.2

Q ss_pred             CcccCCCCcEEEEEec-CC-EEEEEECCCeEEEEcCCCc-eEEe--ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         110 LDCILHDDWVSAIDFH-ND-WILTGCYDHSVHIWTRRGE-HKLN--IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~-~~-~l~t~~~dg~i~iwd~~~~-~~~~--~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      .....|.+.|..+.|- ++ .|++++.|.++++||+.+. ....  +.+|.+.|.+++|.|.  +...|++|+.||.|.|
T Consensus        94 k~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~--n~~vF~tGgRDg~ill  171 (720)
T KOG0321|consen   94 KKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPT--NPAVFCTGGRDGEILL  171 (720)
T ss_pred             cccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccC--CCcceeeccCCCcEEE
Confidence            3345699999999998 43 8999999999999999543 3333  7899999999999877  4558999999999999


Q ss_pred             EeecCCCCc--------------e---------eEEEEEecCCCCeEE---EEEcCCCCEEEEEeC-CCcEEEEECCCCC
Q psy2107         185 WEWKVESNS--------------I---------ECIHVCRGHERGLET---VTVSESRQQFATGGW-DCLLKIWSADISK  237 (391)
Q Consensus       185 wd~~~~~~~--------------~---------~~~~~~~~~~~~v~~---l~~~~~~~~l~sg~~-dg~i~iwd~~~~~  237 (391)
                      ||++.....              .         +.+..-..+...|.+   +.+..|...||+++. |+.|++||++...
T Consensus       172 WD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~  251 (720)
T KOG0321|consen  172 WDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNY  251 (720)
T ss_pred             EEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccc
Confidence            998643200              0         011112234445555   556667788998887 9999999998755


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCc---cCcccEEEec-cCCeEEEEECCCeEEEEecccCc--eeEE
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH---KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGG--MKSE  311 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~~~~  311 (391)
                      ......+                     .....+..|   ...++++... .+.+|++.+.|+.|.+|++.+..  ++..
T Consensus       252 ~~~r~ep---------------------~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~  310 (720)
T KOG0321|consen  252 TAYRQEP---------------------RGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAE  310 (720)
T ss_pred             cccccCC---------------------CcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhh
Confidence            4322111                     011112222   3345666666 45677777789999999998643  3333


Q ss_pred             EECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         312 IVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       312 ~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      +.++-   -...-..+|++.++++|+.|...++|.+.....  ....+.+|.-.|++++|.|..-.-++||++|..++||
T Consensus       311 ~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~--~~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW  388 (720)
T KOG0321|consen  311 FSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEA--PPALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIW  388 (720)
T ss_pred             ccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccC--ChhhhhCcceEEEEEeeccccCCCceeeccCcceEEE
Confidence            33322   223355789999999999999999999877543  3346779999999999998554458999999999999


Q ss_pred             ec
Q psy2107         389 DL  390 (391)
Q Consensus       389 dl  390 (391)
                      ++
T Consensus       389 ~l  390 (720)
T KOG0321|consen  389 RL  390 (720)
T ss_pred             ec
Confidence            97

>KOG0646|consensus

Probab=99.93  E-value=1e-24  Score=181.14  Aligned_cols=221  Identities=15%  Similarity=0.249  Sum_probs=180.6

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC--
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV--  189 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~--  189 (391)
                      -.++|.|++-+  |.+|+.|+..|.|++|.+ +|..+..+.+|=..|+|+.|   +.++.+|++|+.||.|.+|.+..  
T Consensus        80 ~Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~f---s~dgs~iiTgskDg~V~vW~l~~lv  156 (476)
T KOG0646|consen   80 LPGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKF---SDDGSHIITGSKDGAVLVWLLTDLV  156 (476)
T ss_pred             cccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEE---eCCCcEEEecCCCccEEEEEEEeec
Confidence            45689999887  668888889999999999 67777788899999999999   88999999999999999998631  


Q ss_pred             ---CCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         190 ---ESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       190 ---~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                         .+....+++.+..|.-+|+.+...+.  ..+++++|.|.++++||+..+.                           
T Consensus       157 ~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~---------------------------  209 (476)
T KOG0646|consen  157 SADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGV---------------------------  209 (476)
T ss_pred             ccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccce---------------------------
Confidence               23356788999999999999998775  3679999999999999997643                           


Q ss_pred             CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCc----------------eeEEEECC---eeeEEEEEC
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGG----------------MKSEIVGN---KSFFDVHYS  324 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~----------------~~~~~~~~---~~i~~~~~~  324 (391)
                        .+.++. ....+.+++.+|.. .++.|+.+|.|.+.++....                ....+.+|   +.|+|++++
T Consensus       210 --LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais  286 (476)
T KOG0646|consen  210 --LLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAIS  286 (476)
T ss_pred             --eeEEEe-cCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEe
Confidence              333332 45678999999655 59999999999998875322                22333333   379999999


Q ss_pred             CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       325 p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      -||.+|++|+.||.|+|||+...+   +++++....++|+.+.+.|-
T Consensus       287 ~DgtlLlSGd~dg~VcvWdi~S~Q---~iRtl~~~kgpVtnL~i~~~  330 (476)
T KOG0646|consen  287 TDGTLLLSGDEDGKVCVWDIYSKQ---CIRTLQTSKGPVTNLQINPL  330 (476)
T ss_pred             cCccEEEeeCCCCCEEEEecchHH---HHHHHhhhccccceeEeecc
Confidence            999999999999999999998766   67777667789999999663

>KOG0269|consensus

Probab=99.93  E-value=2e-25  Score=196.07  Aligned_cols=201  Identities=19%  Similarity=0.364  Sum_probs=161.5

Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .+..|.|..  -+.++||+++..|.|.+||+... .....+..|..|...++++.|++. ..+|++|+.||.|++||++.
T Consensus        89 S~~DVkW~~--~~~NlIAT~s~nG~i~vWdlnk~-~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~  165 (839)
T KOG0269|consen   89 SAADVKWGQ--LYSNLIATCSTNGVISVWDLNKS-IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRS  165 (839)
T ss_pred             ehhhccccc--chhhhheeecCCCcEEEEecCcc-ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeec
Confidence            455688852  36779999999999999998643 233456678899999999999984 57889999999999999986


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCeEEEEECCCeEEEEecccCc-eeEEE
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGG-MKSEI  312 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~-~~~~~  312 (391)
                                                   .....++.+....|..+.|+|  +..|+++...|.+++||++... +...+
T Consensus       166 -----------------------------~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~  216 (839)
T KOG0269|consen  166 -----------------------------KKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKL  216 (839)
T ss_pred             -----------------------------ccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHh
Confidence                                         334556667888999999994  5669999999999999999654 44444


Q ss_pred             EC-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee--CCCcEEEEe
Q psy2107         313 VG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS--FDNSVKLWD  389 (391)
Q Consensus       313 ~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~v~iwd  389 (391)
                      .. .+++.|+.|+|++.+||+|+.|+.|+|||....... ...++. -..+|..++|-|...++|++++  .|-.|+|||
T Consensus       217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~-~~~tIn-Tiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWD  294 (839)
T KOG0269|consen  217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAK-PKHTIN-TIAPVGRVKWRPARSYHLATCSMVVDTSVHVWD  294 (839)
T ss_pred             hcccCceEEEeecCCCceeeecCCCccEEEEeccCCCcc-ceeEEe-ecceeeeeeeccCccchhhhhhccccceEEEEe
Confidence            44 459999999999999999999999999999764422 222332 3468999999998888999887  477899999


Q ss_pred             cC
Q psy2107         390 LR  391 (391)
Q Consensus       390 lr  391 (391)
                      +|
T Consensus       295 vr  296 (839)
T KOG0269|consen  295 VR  296 (839)
T ss_pred             ec
Confidence            96

>KOG0639|consensus

Probab=99.93  E-value=3.3e-24  Score=179.80  Aligned_cols=256  Identities=13%  Similarity=0.254  Sum_probs=202.4

Q ss_pred             cceEEEEEEeccCCCCC---CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce---EEeccCCCCCeeEEEEE
Q psy2107          93 ENVIDVEYLESTPTPSP---LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH---KLNIPGHGGPVKGVAWL  164 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~---~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~  164 (391)
                      .+-+++|.+.......+   +.|+...+.|.++...  |+.|++|++-.++.|||+....   ...+....-.+.+++. 
T Consensus       439 kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~-  517 (705)
T KOG0639|consen  439 KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI-  517 (705)
T ss_pred             CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhc-
Confidence            45678888765544433   5566677788877775  7799999999999999994322   2234444456778888 


Q ss_pred             ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCC
Q psy2107         165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~  244 (391)
                        ++|.+.+++++.||.|.|||+.    +...++.|++|.+.+.||.++++|..|.+|+-|++|+.||++++++..    
T Consensus       518 --spDakvcFsccsdGnI~vwDLh----nq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlq----  587 (705)
T KOG0639|consen  518 --SPDAKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQ----  587 (705)
T ss_pred             --CCccceeeeeccCCcEEEEEcc----cceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhh----
Confidence              7789999999999999999976    557889999999999999999999999999999999999998755421    


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY  323 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~  323 (391)
                                               . ....+.|.++.++|.+ .++.|-..+.+.+........-+.-.+.+.|.++.|
T Consensus       588 -------------------------q-hdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKF  641 (705)
T KOG0639|consen  588 -------------------------Q-HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKF  641 (705)
T ss_pred             -------------------------h-hhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEe
Confidence                                     1 1235778899989655 588888899998887765555445556679999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         324 SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       324 ~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+.|+++++.+.|+.+..|....+.   .+.... -.+.|.++..+. +.++++||+.|..-.||.+
T Consensus       642 a~cGkwfvStGkDnlLnawrtPyGa---siFqsk-E~SsVlsCDIS~-ddkyIVTGSGdkkATVYeV  703 (705)
T KOG0639|consen  642 AYCGKWFVSTGKDNLLNAWRTPYGA---SIFQSK-ESSSVLSCDISF-DDKYIVTGSGDKKATVYEV  703 (705)
T ss_pred             cccCceeeecCchhhhhhccCcccc---ceeecc-ccCcceeeeecc-CceEEEecCCCcceEEEEE
Confidence            9999999999999999999977655   333333 456799999998 6678999999998888875

>KOG0270|consensus

Probab=99.93  E-value=3.4e-24  Score=176.98  Aligned_cols=229  Identities=16%  Similarity=0.234  Sum_probs=177.2

Q ss_pred             CCEEEEEECCCeEEEEcCC--C--ceEEe------------------ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         126 NDWILTGCYDHSVHIWTRR--G--EHKLN------------------IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~--~--~~~~~------------------~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      |+++|.|+.|..|.|||+.  .  ....+                  -.+|+.+|.+++|.-.  ..+.||+|+.|.+|+
T Consensus       192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~--~~nVLaSgsaD~TV~  269 (463)
T KOG0270|consen  192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRN--FRNVLASGSADKTVK  269 (463)
T ss_pred             cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccc--cceeEEecCCCceEE
Confidence            6799999999999999973  1  11111                  1268899999999543  566999999999999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +||+.    ..++..++..|.+.|.+++|+|. ...|++|+.|+++.+.|.+....                        
T Consensus       270 lWD~~----~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~------------------------  321 (463)
T KOG0270|consen  270 LWDVD----TGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSN------------------------  321 (463)
T ss_pred             EEEcC----CCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccc------------------------
Confidence            99976    45677778889999999999994 57899999999999999985221                        


Q ss_pred             CCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEEECCCC-CEEEEeeCCC
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVHYSPLS-KLVITASADK  337 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg  337 (391)
                          .-..++ -.+.|..++|.+.  ..+++++.||+|+-+|++.. +++.+++.|. +|.++++++.- .++++++.|+
T Consensus       322 ----s~~~wk-~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~  396 (463)
T KOG0270|consen  322 ----SGKEWK-FDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDK  396 (463)
T ss_pred             ----cCceEE-eccceEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccc
Confidence                111121 2567889999954  45889999999999999975 8888888776 89999999874 4788999999


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .|++|++...... .+..-.-.-+...|.++.|+...+++.||..+.++|||+
T Consensus       397 ~Vklw~~~~~~~~-~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~  448 (463)
T KOG0270|consen  397 VVKLWKFDVDSPK-SVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDI  448 (463)
T ss_pred             eEEEEeecCCCCc-ccccccccccceeecccCCCcceEEEecCccceEEEeec
Confidence            9999998754422 111111112346788889988889999999999999996

>KOG0267|consensus

Probab=99.93  E-value=6.9e-26  Score=197.49  Aligned_cols=216  Identities=24%  Similarity=0.417  Sum_probs=185.1

Q ss_pred             EEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107         131 TGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV  210 (391)
Q Consensus       131 t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l  210 (391)
                      ....+-.+++|+...     +..|...+.++..   ...+..+++|+.|..+-+|.+.    ....+..+.+|..+|.++
T Consensus         9 ~~~~~t~Lr~~~~~~-----~~~hsaav~~lk~---~~s~r~~~~Gg~~~k~~L~~i~----kp~~i~S~~~hespIeSl   76 (825)
T KOG0267|consen    9 KTKRATKLRVWDTRE-----FVAHSAAVGCLKI---RKSSRSLVTGGEDEKVNLWAIG----KPNAITSLTGHESPIESL   76 (825)
T ss_pred             eeeeeeccccccchh-----hhhhhhhhceeee---eccceeeccCCCceeecccccc----CCchhheeeccCCcceee
Confidence            344444566777532     2357788888887   4467789999999999999854    334556689999999999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E
Q psy2107         211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I  289 (391)
Q Consensus       211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l  289 (391)
                      .|++...+|++|+.+|.|++||++.                             .+.+.++.+|...+.++.|+|.+. +
T Consensus        77 ~f~~~E~LlaagsasgtiK~wDlee-----------------------------Ak~vrtLtgh~~~~~sv~f~P~~~~~  127 (825)
T KOG0267|consen   77 TFDTSERLLAAGSASGTIKVWDLEE-----------------------------AKIVRTLTGHLLNITSVDFHPYGEFF  127 (825)
T ss_pred             ecCcchhhhcccccCCceeeeehhh-----------------------------hhhhhhhhccccCcceeeeccceEEe
Confidence            9999999999999999999999976                             345778999999999999998766 6


Q ss_pred             EEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         290 ITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      +.|+.|+.+++||.+...+...+.+|. .+.++.|+|+|++++.|++|..++|||...++   +...|..|.+.+.++.|
T Consensus       128 a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk---~~~ef~~~e~~v~sle~  204 (825)
T KOG0267|consen  128 ASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGK---LSKEFKSHEGKVQSLEF  204 (825)
T ss_pred             ccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccc---ccccccccccccccccc
Confidence            678999999999999888888888766 67789999999999999999999999998777   88899999999999999


Q ss_pred             CCCCCCEEEEeeCCCcEEEEecC
Q psy2107         369 SPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +| ...++++||.|++|++||++
T Consensus       205 hp-~e~Lla~Gs~d~tv~f~dle  226 (825)
T KOG0267|consen  205 HP-LEVLLAPGSSDRTVRFWDLE  226 (825)
T ss_pred             Cc-hhhhhccCCCCceeeeeccc
Confidence            99 77899999999999999985

>KOG2048|consensus

Probab=99.93  E-value=3.2e-23  Score=179.74  Aligned_cols=268  Identities=14%  Similarity=0.199  Sum_probs=209.2

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      .+.+.+++|......-..+.-..+-...|.+++|. +..|.+.+.+|.|.-||+ +.++...+....++|++++.   ++
T Consensus        44 Rt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai---~p  120 (691)
T KOG2048|consen   44 RTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAI---NP  120 (691)
T ss_pred             ccCCcEEEEccCCCceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEe---CC
Confidence            35778888877553322222222456679999999 889999999999999999 78888888889999999999   55


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      .+..++.|+.||.+..++  .+.........+...++.|.+++|+|++..+++|+.||.|++||...+......      
T Consensus       121 ~~~~l~IgcddGvl~~~s--~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~------  192 (691)
T KOG2048|consen  121 ENTILAIGCDDGVLYDFS--IGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII------  192 (691)
T ss_pred             ccceEEeecCCceEEEEe--cCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe------
Confidence            678899999999666665  445555666666667789999999999999999999999999999775532100      


Q ss_pred             CccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL  326 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~  326 (391)
                                      ...+..+.. ...-|+++.|-.++.|++|..-|+|.+||...+.+++.+..+. .|.+++..++
T Consensus       193 ----------------~~~~d~l~k~~~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~  256 (691)
T KOG2048|consen  193 ----------------TMQLDRLSKREPTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADN  256 (691)
T ss_pred             ----------------eecccccccCCceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCC
Confidence                            001111111 3345778888888999999999999999999999999988765 8999999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         327 SKLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      +.++++++.|+.|.-|...+... .........|...|.+++..+   ..+++||.|+++.+=
T Consensus       257 ~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~---~~l~sgG~d~~l~i~  316 (691)
T KOG2048|consen  257 EDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIE---NALISGGRDFTLAIC  316 (691)
T ss_pred             CCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeec---ceEEecceeeEEEEc
Confidence            99999999999999988766543 222334456888899999987   379999999988763

>KOG0294|consensus

Probab=99.93  E-value=1.4e-23  Score=166.16  Aligned_cols=218  Identities=17%  Similarity=0.264  Sum_probs=174.6

Q ss_pred             EEEEEECCCeEEEEcCCCc-------------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         128 WILTGCYDHSVHIWTRRGE-------------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~-------------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .+++|++...|.=+++...             .+..+..|.+++++++.     ++.++|+|+.|-+|+|||+.    ..
T Consensus         3 ~iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAV-----s~~~~aSGssDetI~IYDm~----k~   73 (362)
T KOG0294|consen    3 EIIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAV-----SGPYVASGSSDETIHIYDMR----KR   73 (362)
T ss_pred             eEEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEe-----cceeEeccCCCCcEEEEecc----ch
Confidence            4678888877777765211             13345689999999999     78899999999999999976    23


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQ--QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ..+..+-.|.+.|+++.|.+...  .|++|+.||.|.+|+...                             ...+..++
T Consensus        74 ~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~-----------------------------W~~~~slK  124 (362)
T KOG0294|consen   74 KQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGS-----------------------------WELLKSLK  124 (362)
T ss_pred             hhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCC-----------------------------eEEeeeec
Confidence            44566778999999999998764  899999999999999965                             56788999


Q ss_pred             CccCcccEEEeccCCeE-EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         273 GHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      +|.+.|+.++.+|.+.| ++.+.|+.++.||+-.|+.-...........+.|+|.|.+++.++.+ .|-+|.+....   
T Consensus       125 ~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~---  200 (362)
T KOG0294|consen  125 AHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNAS---  200 (362)
T ss_pred             ccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEecc-EEEEEecccHh---
Confidence            99999999999988875 56699999999999999988777776666679999999988888754 58899887644   


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +...+. ....+.++.|.  ++..|++|++|+.|.+||-
T Consensus       201 v~~~i~-~~~r~l~~~~l--~~~~L~vG~d~~~i~~~D~  236 (362)
T KOG0294|consen  201 VFREIE-NPKRILCATFL--DGSELLVGGDNEWISLKDT  236 (362)
T ss_pred             Hhhhhh-ccccceeeeec--CCceEEEecCCceEEEecc
Confidence            322222 22457777776  4557999999999999984

>KOG0307|consensus

Probab=99.93  E-value=7.4e-25  Score=200.62  Aligned_cols=289  Identities=18%  Similarity=0.386  Sum_probs=208.8

Q ss_pred             eeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEEeccCCC---CCCcccCCCCcEEEEEec--CC----EEEEEECCC
Q psy2107          67 QFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYLESTPTP---SPLDCILHDDWVSAIDFH--ND----WILTGCYDH  136 (391)
Q Consensus        67 ~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~--~~----~l~t~~~dg  136 (391)
                      -|++.+.+. +++..-..-......+++..++++-.......   .+.....-..+-+.++|.  ++    +||.|..||
T Consensus        11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG   90 (1049)
T KOG0307|consen   11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDG   90 (1049)
T ss_pred             eEEecCCCchhhHHHhhhhccccccccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCC
Confidence            356666664 23322111111122244555555544333222   233344456677888986  33    599999999


Q ss_pred             eEEEEcCCC-------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEE
Q psy2107         137 SVHIWTRRG-------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLET  209 (391)
Q Consensus       137 ~i~iwd~~~-------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~  209 (391)
                      .|-+||...       ..+.+...|.+.|..+.|.+.  .+++||+|+.||.|.|||++........-  -....+.|.+
T Consensus        91 ~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~--q~nlLASGa~~geI~iWDlnn~~tP~~~~--~~~~~~eI~~  166 (1049)
T KOG0307|consen   91 NIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPF--QGNLLASGADDGEILIWDLNKPETPFTPG--SQAPPSEIKC  166 (1049)
T ss_pred             ceEEecchhhccCcchHHHhhhcccCCceeeeecccc--CCceeeccCCCCcEEEeccCCcCCCCCCC--CCCCcccceE
Confidence            999999733       234466789999999999654  55699999999999999986432221111  1224568999


Q ss_pred             EEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc--CcccEEEeccC
Q psy2107         210 VTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK--EAISAVQWTAV  286 (391)
Q Consensus       210 l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~  286 (391)
                      ++|+.. ...|++++.+|.+.|||++..+                             ++..+..+.  ..+..++|+|+
T Consensus       167 lsWNrkvqhILAS~s~sg~~~iWDlr~~~-----------------------------pii~ls~~~~~~~~S~l~WhP~  217 (1049)
T KOG0307|consen  167 LSWNRKVSHILASGSPSGRAVIWDLRKKK-----------------------------PIIKLSDTPGRMHCSVLAWHPD  217 (1049)
T ss_pred             eccchhhhHHhhccCCCCCceeccccCCC-----------------------------cccccccCCCccceeeeeeCCC
Confidence            999874 4567889999999999998743                             444444443  34678999976


Q ss_pred             C--eEEEEECCC---eEEEEecccC-ceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEEEEecc
Q psy2107         287 D--EIITSSWDH---TLKIWDAELG-GMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       287 ~--~l~s~~~dg---~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~  358 (391)
                      +  .+++++.|.   .|.+||++.. ..++++.+|. .|.++.|++.+ ++|++++.|+.|.+|+.++++   .+..+..
T Consensus       218 ~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgE---vl~~~p~  294 (1049)
T KOG0307|consen  218 HATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGE---VLGELPA  294 (1049)
T ss_pred             CceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCce---EeeecCC
Confidence            4  477776653   6999999864 4667776665 89999999977 799999999999999999887   8888888


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...++..+.|+|.+..+++.++.||.|.|+.+.
T Consensus       295 ~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~  327 (1049)
T KOG0307|consen  295 QGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ  327 (1049)
T ss_pred             CCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence            889999999999888899999999999999863

>KOG1539|consensus

Probab=99.92  E-value=1.8e-23  Score=185.35  Aligned_cols=288  Identities=20%  Similarity=0.272  Sum_probs=214.7

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC--CEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN--DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      ++++.+.+|.......  ..++.++.+.|+++.-++  +.+|.|..+|+|.|++++ ++.+.+++...++|++++|   .
T Consensus       179 s~~G~lql~Nvrt~K~--v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSF---r  253 (910)
T KOG1539|consen  179 SSQGRLQLWNVRTGKV--VYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSF---R  253 (910)
T ss_pred             ecCCcEEEEEeccCcE--EEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEEEEEccccceeEEEe---c
Confidence            5677888887754332  455667889999999884  699999999999999994 5666677655699999999   6


Q ss_pred             CCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCC-----
Q psy2107         168 GKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGD-----  241 (391)
Q Consensus       168 ~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~-----  241 (391)
                      .||. .+++|+..|.+.+||++..   .........|.+.|....|-|....+++++.|+.+++|=.+++.....     
T Consensus       254 tDG~p~las~~~~G~m~~wDLe~k---kl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R  330 (910)
T KOG1539|consen  254 TDGNPLLASGRSNGDMAFWDLEKK---KLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSR  330 (910)
T ss_pred             cCCCeeEEeccCCceEEEEEcCCC---eeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeec
Confidence            6666 6777788899999997621   122233347888999999999999999999999988886653322100     


Q ss_pred             ------C----------------C-----------------CCCC--CCcccccccc-----------------------
Q psy2107         242 ------P----------------S-----------------ENGD--EGTTSKKRKK-----------------------  257 (391)
Q Consensus       242 ------~----------------~-----------------~~~~--~~~~~~~~~~-----------------------  257 (391)
                            +                .                 ..+.  .....++...                       
T Consensus       331 ~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~  410 (910)
T KOG1539|consen  331 GGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKE  410 (910)
T ss_pred             cCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhh
Confidence                  0                0                 0000  0000000000                       


Q ss_pred             --------------ccc------------------------------------------------cCCCCCceeee---c
Q psy2107         258 --------------EYS------------------------------------------------SASSRTPLITL---K  272 (391)
Q Consensus       258 --------------~~~------------------------------------------------~~~~~~~~~~~---~  272 (391)
                                    ..|                                                ...++-....+   .
T Consensus       411 W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~  490 (910)
T KOG1539|consen  411 WDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSP  490 (910)
T ss_pred             hcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCc
Confidence                          000                                                00011111122   3


Q ss_pred             CccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         273 GHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       273 ~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      .|..+|+.++... +..+++++.+|.+.+||......+..+....++.++..+.....++++.+|-.|+++|..+.+   
T Consensus       491 ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~k---  567 (910)
T KOG1539|consen  491 AHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRK---  567 (910)
T ss_pred             cccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhh---
Confidence            6888899999884 445999999999999999999999999988999999999999999999999999999998776   


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++.+.+|.+.|++++||| ++++|++++.|++|++||+
T Consensus       568 vvR~f~gh~nritd~~FS~-DgrWlisasmD~tIr~wDl  605 (910)
T KOG1539|consen  568 VVREFWGHGNRITDMTFSP-DGRWLISASMDSTIRTWDL  605 (910)
T ss_pred             hhHHhhccccceeeeEeCC-CCcEEEEeecCCcEEEEec
Confidence            8889999999999999999 7789999999999999997

>KOG2445|consensus

Probab=99.92  E-value=4.4e-23  Score=162.87  Aligned_cols=216  Identities=21%  Similarity=0.393  Sum_probs=170.3

Q ss_pred             cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEE
Q psy2107         152 PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCLLK  229 (391)
Q Consensus       152 ~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~  229 (391)
                      .+|..-|.++.|   +..|+.+|+|+.|++|+|||.+..++++.+....+.|.+.|..+.|.+  -|+.+|+++.|+++.
T Consensus        10 s~h~DlihdVs~---D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~   86 (361)
T KOG2445|consen   10 SGHKDLIHDVSF---DFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVS   86 (361)
T ss_pred             cCCcceeeeeee---cccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCcee
Confidence            368888999999   888999999999999999998888889999999999999999999966  589999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC---eEEEEECCCeEEEEecccC
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD---EIITSSWDHTLKIWDAELG  306 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~  306 (391)
                      ||.-.......                    .........++....+.|+.+.|.|..   .+++++.||.+|||+....
T Consensus        87 iWEE~~~~~~~--------------------~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp  146 (361)
T KOG2445|consen   87 IWEEQEKSEEA--------------------HGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDP  146 (361)
T ss_pred             eeeeccccccc--------------------ccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCc
Confidence            99864211110                    011233455677788999999999754   3889999999999986543


Q ss_pred             ------ceeEEEE--------CCeeeEEEEECCC---CCEEEEeeCC-----CcEEEEcCCCCC-cceEEEEeccccCcE
Q psy2107         307 ------GMKSEIV--------GNKSFFDVHYSPL---SKLVITASAD-----KQIRLYDPKVKE-GAIVKSTFSSHKEWV  363 (391)
Q Consensus       307 ------~~~~~~~--------~~~~i~~~~~~p~---~~~l~~g~~d-----g~i~iwd~~~~~-~~~~~~~~~~h~~~v  363 (391)
                            .+...++        .+.+..|+.|+|.   ..+||+|+.+     +.+.||...... ....+..+.+|..+|
T Consensus       147 ~nLs~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI  226 (361)
T KOG2445|consen  147 MNLSQWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPI  226 (361)
T ss_pred             cccccchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcc
Confidence                  2333333        3447889999985   4588888866     478899865433 334566788999999


Q ss_pred             EEEEECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107         364 QSVRWSPIDP---QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       364 ~~~~~~~~~~---~~l~s~~~dg~v~iwdlr  391 (391)
                      ++++|.|.-+   .+||+++.|| |+||.++
T Consensus       227 ~di~wAPn~Gr~y~~lAvA~kDg-v~I~~v~  256 (361)
T KOG2445|consen  227 RDISWAPNIGRSYHLLAVATKDG-VRIFKVK  256 (361)
T ss_pred             eeeeeccccCCceeeEEEeecCc-EEEEEEe
Confidence            9999999533   4799999999 9999874

>KOG1034|consensus

Probab=99.92  E-value=2.4e-23  Score=165.78  Aligned_cols=265  Identities=20%  Similarity=0.387  Sum_probs=187.4

Q ss_pred             CCCcEEEEEec-----CC-EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         115 HDDWVSAIDFH-----ND-WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       115 h~~~V~~~~~~-----~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      |...-..++|.     ++ ++|+|+.-|.|+|.|+ +++....+.+|...|+.+.+.|.  ..+++++++.|..|++|++
T Consensus        88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~--~~qlvls~SkD~svRlwnI  165 (385)
T KOG1034|consen   88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPD--RPQLVLSASKDHSVRLWNI  165 (385)
T ss_pred             CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCC--CCcEEEEecCCceEEEEec
Confidence            55566666664     23 8999999999999999 66677789999999999999876  4469999999999999997


Q ss_pred             cCCCCceeEEEEE---ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         188 KVESNSIECIHVC---RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       188 ~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +    +..++..+   .+|.+.|.++.|++++.+|++++.|..|++|++...+..........  ....+....+.....
T Consensus       166 ~----~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~--~~~~~t~~pfpt~~~  239 (385)
T KOG1034|consen  166 Q----TDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSIT--YSPNKTTRPFPTPKT  239 (385)
T ss_pred             c----CCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcc--cCCCCccCcCCcccc
Confidence            6    44566665   47999999999999999999999999999999985432211100000  000000000000000


Q ss_pred             CCcee-eecCccCcccEEEeccCCeEEEEECCCeEEEEec-ccCc-------------eeEEEECCe---eeEEEEECCC
Q psy2107         265 RTPLI-TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDA-ELGG-------------MKSEIVGNK---SFFDVHYSPL  326 (391)
Q Consensus       265 ~~~~~-~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~-------------~~~~~~~~~---~i~~~~~~p~  326 (391)
                      .-+.. +-.-|..+|.|+.|-. +.+++-+-++.|..|.. +-++             .+.++..+.   .....+|.|-
T Consensus       240 ~fp~fst~diHrnyVDCvrw~g-d~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~  318 (385)
T KOG1034|consen  240 HFPDFSTTDIHRNYVDCVRWFG-DFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPW  318 (385)
T ss_pred             ccccccccccccchHHHHHHHh-hheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHH
Confidence            11111 3346889999999986 67888888999999986 2111             122222222   2445667788


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++||.|...|.|++||++..+.... .++.  .....|...+|+. ++.+|+..++|++|.-||-
T Consensus       319 ~~~la~gnq~g~v~vwdL~~~ep~~~-ttl~~s~~~~tVRQ~sfS~-dgs~lv~vcdd~~Vwrwdr  382 (385)
T KOG1034|consen  319 QKMLALGNQSGKVYVWDLDNNEPPKC-TTLTHSKSGSTVRQTSFSR-DGSILVLVCDDGTVWRWDR  382 (385)
T ss_pred             HHHHhhccCCCcEEEEECCCCCCccC-ceEEeccccceeeeeeecc-cCcEEEEEeCCCcEEEEEe
Confidence            99999999999999999987654322 2222  2345799999999 6678999999999999984

>KOG1446|consensus

Probab=99.92  E-value=4.5e-22  Score=157.98  Aligned_cols=202  Identities=20%  Similarity=0.329  Sum_probs=156.1

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCc
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCL  227 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~  227 (391)
                      .+....+.|.++.|   +.+|..+++++.|.++++||..    ....+.++..+.-.+..++|....+.++.++.  |..
T Consensus         9 ~f~~~~~~i~sl~f---s~~G~~litss~dDsl~LYd~~----~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~t   81 (311)
T KOG1446|consen    9 VFRETNGKINSLDF---SDDGLLLITSSEDDSLRLYDSL----SGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDT   81 (311)
T ss_pred             ccccCCCceeEEEe---cCCCCEEEEecCCCeEEEEEcC----CCceeeEeecccccccEEEEecCCceEEEccCCCCCc
Confidence            34446788999999   8899999999999999999954    55677888888888999999877777777776  889


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccC
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELG  306 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~  306 (391)
                      |+..++.+                             .+.++.+.||...|.+++.+|. ..+++++.|++|++||++..
T Consensus        82 IryLsl~d-----------------------------NkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~  132 (311)
T KOG1446|consen   82 IRYLSLHD-----------------------------NKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVK  132 (311)
T ss_pred             eEEEEeec-----------------------------CceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCC
Confidence            99999976                             6689999999999999999964 56999999999999999865


Q ss_pred             ceeEEEECC----------------------------------------------eeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         307 GMKSEIVGN----------------------------------------------KSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       307 ~~~~~~~~~----------------------------------------------~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      ++...+...                                              .....+.|+|+|++|+.++..+.++
T Consensus       133 ~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~  212 (311)
T KOG1446|consen  133 KCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIY  212 (311)
T ss_pred             CCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEE
Confidence            543333221                                              1345566677777666666666666


Q ss_pred             EEcCCCCCcceEEEEeccccCc---EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKEW---VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.|.-.+.   +...+..+...   -....|+| +++++++|+.||+|.+|+++
T Consensus       213 ~lDAf~G~---~~~tfs~~~~~~~~~~~a~ftP-ds~Fvl~gs~dg~i~vw~~~  262 (311)
T KOG1446|consen  213 LLDAFDGT---VKSTFSGYPNAGNLPLSATFTP-DSKFVLSGSDDGTIHVWNLE  262 (311)
T ss_pred             EEEccCCc---EeeeEeeccCCCCcceeEEECC-CCcEEEEecCCCcEEEEEcC
Confidence            66665554   44555554432   25778999 77899999999999999974

>KOG2106|consensus

Probab=99.91  E-value=4.9e-22  Score=166.89  Aligned_cols=235  Identities=19%  Similarity=0.294  Sum_probs=185.5

Q ss_pred             CcEEEEEec-CCEEEEEECCCeEEEEcCCCce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC---
Q psy2107         117 DWVSAIDFH-NDWILTGCYDHSVHIWTRRGEH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES---  191 (391)
Q Consensus       117 ~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---  191 (391)
                      ..|.|++|. +.-++||..+|.|.||+..+.. ..+...|.+.|.+++.+   .+|. |++|+.|..|..||-+...   
T Consensus       247 k~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~l---r~Gt-llSGgKDRki~~Wd~~y~k~r~  322 (626)
T KOG2106|consen  247 KFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCML---RDGT-LLSGGKDRKIILWDDNYRKLRE  322 (626)
T ss_pred             eEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEe---cCcc-EeecCccceEEecccccccccc
Confidence            679999998 5588999999999999995443 33455999999999984   3454 6669999999999822100   


Q ss_pred             -----C----------------------------ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         192 -----N----------------------------SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       192 -----~----------------------------~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                           .                            .........+|......++.+|+.+.+++++.|+.+++|+- .   
T Consensus       323 ~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~~-~---  398 (626)
T KOG2106|consen  323 TELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWND-H---  398 (626)
T ss_pred             ccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEccC-C---
Confidence                 0                            00011233578888999999999999999999999999992 1   


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeee
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF  318 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i  318 (391)
                                                 +++.+. --..+..|+.|+|.+.++.|+..|...+.|.++...+.......++
T Consensus       399 ---------------------------k~~wt~-~~~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d~~~l  450 (626)
T KOG2106|consen  399 ---------------------------KLEWTK-IIEDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTDNEQL  450 (626)
T ss_pred             ---------------------------ceeEEE-EecCceeEeeccCcceEEEeeccceEEEEecccceeEEEEecCCce
Confidence                                       233222 2357788999999999999999999999999997777777777799


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         319 FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .++.|+|+|.+||.|+.|+.|+||-+.... ......-..|..+|+.+.|++ +++++.+-+-|-.|-.|.
T Consensus       451 s~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g-~~y~r~~k~~gs~ithLDwS~-Ds~~~~~~S~d~eiLyW~  519 (626)
T KOG2106|consen  451 SVVRYSPDGAFLAVGSHDNHIYIYRVSANG-RKYSRVGKCSGSPITHLDWSS-DSQFLVSNSGDYEILYWK  519 (626)
T ss_pred             EEEEEcCCCCEEEEecCCCeEEEEEECCCC-cEEEEeeeecCceeEEeeecC-CCceEEeccCceEEEEEc
Confidence            999999999999999999999999986543 223333334458999999999 778899999999999994

>KOG4378|consensus

Probab=99.91  E-value=2.2e-23  Score=174.59  Aligned_cols=244  Identities=14%  Similarity=0.229  Sum_probs=189.6

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEec
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~  166 (391)
                      ...++.+.+|......+..+.......+.-.|++..  ..++++|+..++|+|||+..+.++ .+.+|...|+++.+   
T Consensus        53 ~~gdk~~~~~~K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~hr~lkdh~stvt~v~Y---  129 (673)
T KOG4378|consen   53 MAGDKVMRIKEKDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLIHRFLKDHQSTVTYVDY---  129 (673)
T ss_pred             cCCceeEEEecccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHHhhhccCCcceeEEEEe---
Confidence            345777888865544333333333233344455544  469999999999999999755544 67799999999999   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTVSESRQQ-FATGGWDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~  244 (391)
                      +....+||+++..|.|.+..+....    ....|... ...|.-+.|+|..++ |.+++.+|.|.+||+....       
T Consensus       130 N~~DeyiAsvs~gGdiiih~~~t~~----~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~s-------  198 (673)
T KOG4378|consen  130 NNTDEYIASVSDGGDIIIHGTKTKQ----KTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMS-------  198 (673)
T ss_pred             cCCcceeEEeccCCcEEEEecccCc----cccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCC-------
Confidence            7778899999999999999854222    22233322 345678999997765 5678999999999996522       


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe--EEEEECCCeEEEEecccCceeEEEECCeeeEEEE
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVH  322 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~  322 (391)
                                           ........|..+...++|+|.+.  |++.+.|..|.+||.+..+....+....+...++
T Consensus       199 ---------------------p~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstva  257 (673)
T KOG4378|consen  199 ---------------------PIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVA  257 (673)
T ss_pred             ---------------------cccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceee
Confidence                                 12334568999999999997654  8888999999999999988888898999999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      |+++|.+|++|+..|.|..||++..+  .++.....|...|++++|-|
T Consensus       258 f~~~G~~L~aG~s~G~~i~YD~R~~k--~Pv~v~sah~~sVt~vafq~  303 (673)
T KOG4378|consen  258 FSECGTYLCAGNSKGELIAYDMRSTK--APVAVRSAHDASVTRVAFQP  303 (673)
T ss_pred             ecCCceEEEeecCCceEEEEecccCC--CCceEeeecccceeEEEeee
Confidence            99999999999999999999998744  35667888999999999988

>KOG4328|consensus

Probab=99.91  E-value=2.7e-23  Score=172.29  Aligned_cols=214  Identities=13%  Similarity=0.201  Sum_probs=167.0

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCC
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDC  226 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg  226 (391)
                      ......+.++|++++|+|. .+-+++|+|..-|.|-+||+.........+..+..|..+|.+|.|+|. -..+++.+.||
T Consensus       179 ~~v~kv~~~Rit~l~fHPt-~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDG  257 (498)
T KOG4328|consen  179 LNVAKVTDRRITSLAFHPT-ENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDG  257 (498)
T ss_pred             cceeEecccceEEEEeccc-CcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCc
Confidence            3445568899999999884 445789999999999999986555555667788899999999999994 46799999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEeccc
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~  305 (391)
                      +|++-|++....                           ..+..+......+..+.|+ .+..++.+..=|.+.+||+++
T Consensus       258 tiR~~D~~~~i~---------------------------e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~  310 (498)
T KOG4328|consen  258 TIRLQDFEGNIS---------------------------EEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRT  310 (498)
T ss_pred             eeeeeeecchhh---------------------------HHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeec
Confidence            999999976332                           2233333344556677777 455678887777999999998


Q ss_pred             Cce-eEEEECC-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcce-EEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         306 GGM-KSEIVGN-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAI-VKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       306 ~~~-~~~~~~~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      +.. ...+..| ..|..++++|... +||+++.|++.+|||++...... +......|...|.+..|||.++. |+|.+.
T Consensus       311 ~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gt-l~TT~~  389 (498)
T KOG4328|consen  311 DGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGT-LLTTCQ  389 (498)
T ss_pred             CCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCc-eEeecc
Confidence            765 3344433 4899999999755 78999999999999998755443 22334469999999999998877 999999


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      |..|+|||.
T Consensus       390 D~~IRv~ds  398 (498)
T KOG4328|consen  390 DNEIRVFDS  398 (498)
T ss_pred             CCceEEeec
Confidence            999999985

>KOG1408|consensus

Probab=99.91  E-value=2.3e-22  Score=175.69  Aligned_cols=294  Identities=15%  Similarity=0.191  Sum_probs=215.1

Q ss_pred             HHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCC-CcccCCCCcEEEEEec----
Q psy2107          51 NEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSP-LDCILHDDWVSAIDFH----  125 (391)
Q Consensus        51 ~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~~~~~----  125 (391)
                      +.+........-|+.+...|......+..          +-.+..+-+|+......+.. ...+-|+..|+.+.--    
T Consensus       313 ~~~~s~~~~a~fPD~IA~~Fdet~~klsc----------VYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv  382 (1080)
T KOG1408|consen  313 EPKNSESSPAIFPDAIACQFDETTDKLSC----------VYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNV  382 (1080)
T ss_pred             cccccccCcccCCceeEEEecCCCceEEE----------EEcCceEEEEeccccccccceeeeeeccceeeeeccccccc
Confidence            33333333333333355666654433322          23577888888876655433 3345588888887532    


Q ss_pred             ---------CCEEEEEECCCeEEEEcCCC----ceEEe----------------------------------ccCCCCCe
Q psy2107         126 ---------NDWILTGCYDHSVHIWTRRG----EHKLN----------------------------------IPGHGGPV  158 (391)
Q Consensus       126 ---------~~~l~t~~~dg~i~iwd~~~----~~~~~----------------------------------~~~~~~~v  158 (391)
                               ...+.|++.||+|++||+..    .....                                  .......+
T Consensus       383 ~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~  462 (1080)
T KOG1408|consen  383 HSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGF  462 (1080)
T ss_pred             cCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccce
Confidence                     34799999999999999843    11110                                  01234568


Q ss_pred             eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCC
Q psy2107         159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE---SRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .+++.   +|++.+||+|..-|++++|++.    ..+.......|...|.|+.|+.   ..++|++++.|+.|.+||+..
T Consensus       463 R~~~v---Sp~gqhLAsGDr~GnlrVy~Lq----~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~r  535 (1080)
T KOG1408|consen  463 RALAV---SPDGQHLASGDRGGNLRVYDLQ----ELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKR  535 (1080)
T ss_pred             EEEEE---CCCcceecccCccCceEEEEeh----hhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEeccc
Confidence            89999   7889999999999999999975    4455667789999999999986   357899999999999999853


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC---eEEEEECCCeEEEEecccCceeEEE
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD---EIITSSWDHTLKIWDAELGGMKSEI  312 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~  312 (391)
                                                  ...++.++.+|...|+++.|...+   .+++++.|..|.+--.+.......+
T Consensus       536 ----------------------------ny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f  587 (1080)
T KOG1408|consen  536 ----------------------------NYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLF  587 (1080)
T ss_pred             ----------------------------ccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceec
Confidence                                        345788999999999999999433   4999999988765332211111111


Q ss_pred             ------ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         313 ------VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       313 ------~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                            ..+..+..++..|..+++++++.|..|+||++..++.......-.+|.+....+...| .+.++++.+.|.++.
T Consensus       588 ~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDP-SgiY~atScsdktl~  666 (1080)
T KOG1408|consen  588 PRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDP-SGIYLATSCSDKTLC  666 (1080)
T ss_pred             cccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECC-CccEEEEeecCCceE
Confidence                  1234789999999999999999999999999998874444444456778899999999 778999999999999


Q ss_pred             EEec
Q psy2107         387 LWDL  390 (391)
Q Consensus       387 iwdl  390 (391)
                      ++|+
T Consensus       667 ~~Df  670 (1080)
T KOG1408|consen  667 FVDF  670 (1080)
T ss_pred             EEEe
Confidence            9985

>KOG4283|consensus

Probab=99.91  E-value=7.5e-23  Score=160.70  Aligned_cols=206  Identities=20%  Similarity=0.420  Sum_probs=159.4

Q ss_pred             cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC----ce----eEE---EEEecCCCCeEEEEEcC-CCCEE
Q psy2107         152 PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN----SI----ECI---HVCRGHERGLETVTVSE-SRQQF  219 (391)
Q Consensus       152 ~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~----~~----~~~---~~~~~~~~~v~~l~~~~-~~~~l  219 (391)
                      ..|.+.|+++..-+.  .++++++|+.||.|.+||+...+.    ..    .++   ..-.+|+-.|.++.|-| |.-++
T Consensus        40 r~HgGsvNsL~id~t--egrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmF  117 (397)
T KOG4283|consen   40 RPHGGSVNSLQIDLT--EGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMF  117 (397)
T ss_pred             ccCCCccceeeeccc--cceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCcee
Confidence            468899999999554  788999999999999999863321    01    111   11236888999999999 55678


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc----CCeEEEEECC
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA----VDEIITSSWD  295 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~d  295 (391)
                      .+++.|.++++||.++.+.                             ...++ -.+.|.+-+++|    .-.+++|..|
T Consensus       118 tssSFDhtlKVWDtnTlQ~-----------------------------a~~F~-me~~VYshamSp~a~sHcLiA~gtr~  167 (397)
T KOG4283|consen  118 TSSSFDHTLKVWDTNTLQE-----------------------------AVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRD  167 (397)
T ss_pred             ecccccceEEEeeccccee-----------------------------eEEee-cCceeehhhcChhhhcceEEEEecCC
Confidence            8999999999999987432                             22222 345566666664    2347778889


Q ss_pred             CeEEEEecccCceeEEEECCe-eeEEEEECCCCCE-EEEeeCCCcEEEEcCCCCC------------cceEEEEeccccC
Q psy2107         296 HTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKL-VITASADKQIRLYDPKVKE------------GAIVKSTFSSHKE  361 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~-l~~g~~dg~i~iwd~~~~~------------~~~~~~~~~~h~~  361 (391)
                      -.|++.|+.+|....++.+|. .|.++.|+|...+ |++|+.||.|++||++...            .++....-..|.+
T Consensus       168 ~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~g  247 (397)
T KOG4283|consen  168 VQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYG  247 (397)
T ss_pred             CcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccc
Confidence            999999999999999999887 8999999998774 6789999999999998542            1222333457889


Q ss_pred             cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         362 WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .|++++|+. ++.++++++.|..+++|+.
T Consensus       248 kvngla~tS-d~~~l~~~gtd~r~r~wn~  275 (397)
T KOG4283|consen  248 KVNGLAWTS-DARYLASCGTDDRIRVWNM  275 (397)
T ss_pred             eeeeeeecc-cchhhhhccCccceEEeec
Confidence            999999999 6678999999999999985

>KOG0270|consensus

Probab=99.91  E-value=1.2e-22  Score=167.91  Aligned_cols=224  Identities=21%  Similarity=0.270  Sum_probs=172.7

Q ss_pred             CccceEEEEEEeccCCCCCCccc-------------------CCCCcEEEEEec---CCEEEEEECCCeEEEEcC-CCce
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCI-------------------LHDDWVSAIDFH---NDWILTGCYDHSVHIWTR-RGEH  147 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~-------------------~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~-~~~~  147 (391)
                      ..+..+.+|...-...-.|...+                   +|++.|.+++++   .+.||+||.|.+|++||+ +++.
T Consensus       199 tmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p  278 (463)
T KOG0270|consen  199 TMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKP  278 (463)
T ss_pred             ccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCc
Confidence            45667888876644433332222                   599999999998   569999999999999999 6777


Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCC
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDC  226 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg  226 (391)
                      ...+..|.+.|.++.|+|.  ....|++|+.|++|.+.|.+....... ...   ..+.|..++|.|.. ..++++..||
T Consensus       279 ~~s~~~~~k~Vq~l~wh~~--~p~~LLsGs~D~~V~l~D~R~~~~s~~-~wk---~~g~VEkv~w~~~se~~f~~~tddG  352 (463)
T KOG0270|consen  279 KSSITHHGKKVQTLEWHPY--EPSVLLSGSYDGTVALKDCRDPSNSGK-EWK---FDGEVEKVAWDPHSENSFFVSTDDG  352 (463)
T ss_pred             ceehhhcCCceeEEEecCC--CceEEEeccccceEEeeeccCccccCc-eEE---eccceEEEEecCCCceeEEEecCCc
Confidence            7788889999999999876  567999999999999999874332222 222   35689999999955 5677888999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--cCCeEEEEECCCeEEEEecc
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~  304 (391)
                      .++-+|++..                            .+++.+++.|..+|.+++++  -.+.+.+++.|+.|++|++.
T Consensus       353 ~v~~~D~R~~----------------------------~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~  404 (463)
T KOG0270|consen  353 TVYYFDIRNP----------------------------GKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFD  404 (463)
T ss_pred             eEEeeecCCC----------------------------CCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeec
Confidence            9999999862                            35899999999999999999  34779999999999999987


Q ss_pred             cCceeEEEECC---eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCC
Q psy2107         305 LGGMKSEIVGN---KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       305 ~~~~~~~~~~~---~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .........+.   +...|.++.|+-. .++.|+..+.++|||+.+..
T Consensus       405 ~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~  452 (463)
T KOG0270|consen  405 VDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNS  452 (463)
T ss_pred             CCCCcccccccccccceeecccCCCcceEEEecCccceEEEeecccCh
Confidence            55443222221   1356777777744 67778888899999986643

>KOG2055|consensus

Probab=99.91  E-value=4.4e-22  Score=165.38  Aligned_cols=240  Identities=15%  Similarity=0.246  Sum_probs=185.1

Q ss_pred             CCcEEEEEecC--CEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecC
Q psy2107         116 DDWVSAIDFHN--DWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       116 ~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~  189 (391)
                      .+.|+++.|++  .++++++.||+++||-++++   .+..+.-...+|.+..|   .++|. .+++++....++.||+. 
T Consensus       213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f---~p~G~~~i~~s~rrky~ysyDle-  288 (514)
T KOG2055|consen  213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEF---APNGHSVIFTSGRRKYLYSYDLE-  288 (514)
T ss_pred             cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeee---cCCCceEEEecccceEEEEeecc-
Confidence            45899999994  49999999999999998653   44555556789999999   45666 89999999999999964 


Q ss_pred             CCCceeEEEEEecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         190 ESNSIECIHVCRGHE-RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                       +.....+....++. ..+.....+|++++|+..|..|.|.+....++.                             .+
T Consensus       289 -~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~e-----------------------------li  338 (514)
T KOG2055|consen  289 -TAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKE-----------------------------LI  338 (514)
T ss_pred             -ccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhh-----------------------------hh
Confidence             44444555555543 467888899999999999999999999886633                             34


Q ss_pred             eeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCeee--EEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         269 ITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF--FDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i--~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ..++ -.+.|..++|+. +..|++++.+|.|.+||++...++..+...+.+  ++++.++++.|||+|+..|.|.|||..
T Consensus       339 ~s~K-ieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~  417 (514)
T KOG2055|consen  339 TSFK-IEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGN  417 (514)
T ss_pred             heee-eccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccc
Confidence            4444 356788999994 455888899999999999999999999877754  567788999999999999999999954


Q ss_pred             CCC---cceE------------------------------------EE-----E---ec---cccCcEEEEEECCCCCCE
Q psy2107         346 VKE---GAIV------------------------------------KS-----T---FS---SHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       346 ~~~---~~~~------------------------------------~~-----~---~~---~h~~~v~~~~~~~~~~~~  375 (391)
                      +..   .+.+                                    ++     .   ++   ..-+.|+||+|+| ++.+
T Consensus       418 s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP-~sG~  496 (514)
T KOG2055|consen  418 SCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSP-NSGY  496 (514)
T ss_pred             hhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecC-CCce
Confidence            210   0000                                    00     0   00   1124699999999 5568


Q ss_pred             EEEeeCCCcEEEEecC
Q psy2107         376 FVSASFDNSVKLWDLR  391 (391)
Q Consensus       376 l~s~~~dg~v~iwdlr  391 (391)
                      ||.|..+|.|.+|.|.
T Consensus       497 lAvGNe~grv~l~kL~  512 (514)
T KOG2055|consen  497 LAVGNEAGRVHLFKLH  512 (514)
T ss_pred             EEeecCCCceeeEeec
Confidence            9999999999999873

>KOG0288|consensus

Probab=99.91  E-value=7.4e-24  Score=173.41  Aligned_cols=232  Identities=18%  Similarity=0.300  Sum_probs=168.0

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~  227 (391)
                      ...+..|.+.+..+.|.+   +...|++|+.|..|++|+..  ......+.++.+-.+.|+++.|.++++++++++.|+.
T Consensus       168 ~~~ld~h~gev~~v~~l~---~sdtlatgg~Dr~Ik~W~v~--~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~  242 (459)
T KOG0288|consen  168 LFVLDAHEGEVHDVEFLR---NSDTLATGGSDRIIKLWNVL--GEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKN  242 (459)
T ss_pred             hhhhhccccccceeEEcc---Ccchhhhcchhhhhhhhhcc--cchhhhhhhhhccCCCcceeeecCCCceEEeecCCCc
Confidence            345567999999999955   45679999999999999954  4445667788888899999999999999999999999


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccc-------------cccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTS-------------KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW  294 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~  294 (391)
                      +++|+++..+....+..........             ..+....|+.....+..+.. ..+.+..|..+ ...+++|-.
T Consensus       243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~-~~~~~SgH~  320 (459)
T KOG0288|consen  243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS-ISDVISGHF  320 (459)
T ss_pred             eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccc-ccccccceEec-ceeeeeccc
Confidence            9999998766544332222111111             11111122222222222211 12223333332 234667778


Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc----ccCcEEEEEECC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS----HKEWVQSVRWSP  370 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~  370 (391)
                      |++|++||.+...+......++.|+++..++++..|.+++.|..+.++|+++.+   +...+.+    .....+.+.|||
T Consensus       321 DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e---I~~~~sA~g~k~asDwtrvvfSp  397 (459)
T KOG0288|consen  321 DKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE---IRQTFSAEGFKCASDWTRVVFSP  397 (459)
T ss_pred             ccceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCCCceeeeeccccc---EEEEeeccccccccccceeEECC
Confidence            888889998888888888888899999999999999999999999999999876   4444432    123388999999


Q ss_pred             CCCCEEEEeeCCCcEEEEec
Q psy2107         371 IDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       371 ~~~~~l~s~~~dg~v~iwdl  390 (391)
                       ++.++++||.||.|+||++
T Consensus       398 -d~~YvaAGS~dgsv~iW~v  416 (459)
T KOG0288|consen  398 -DGSYVAAGSADGSVYIWSV  416 (459)
T ss_pred             -CCceeeeccCCCcEEEEEc
Confidence             6678999999999999986

>KOG2096|consensus

Probab=99.90  E-value=3.4e-22  Score=158.70  Aligned_cols=219  Identities=18%  Similarity=0.270  Sum_probs=157.3

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC-ceeEEEEEecCCCCeEEEEEcCCCCEEEE-EeCCC
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN-SIECIHVCRGHERGLETVTVSESRQQFAT-GGWDC  226 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg  226 (391)
                      ..+++|.+.|++++|   +.+|.+|++++.|++|++|+++.-.. ..++++.- -..+..+.+.|.||.+-++. .-...
T Consensus        80 ~~LKgH~~~vt~~~F---sSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~n-ve~dhpT~V~FapDc~s~vv~~~~g~  155 (420)
T KOG2096|consen   80 SVLKGHKKEVTDVAF---SSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQN-VEYDHPTRVVFAPDCKSVVVSVKRGN  155 (420)
T ss_pred             hhhhccCCceeeeEE---cCCCceeEEEeCCceEEEEecchhhhhhhhHhhcc-ccCCCceEEEECCCcceEEEEEccCC
Confidence            357799999999999   88999999999999999999652111 11222211 12335688999999876554 44556


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEeccc
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~  305 (391)
                      .+++|.+...+. +..+...                ........-..|+..+..+-...+ .+|++++.|..|.+|+++ 
T Consensus       156 ~l~vyk~~K~~d-G~~~~~~----------------v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-  217 (420)
T KOG2096|consen  156 KLCVYKLVKKTD-GSGSHHF----------------VHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-  217 (420)
T ss_pred             EEEEEEeeeccc-CCCCccc----------------ccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-
Confidence            799998754332 1000000                000011122345566666666644 458999999999999999 


Q ss_pred             CceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----ceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         306 GGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----AIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       306 ~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      |+.+..+..+. .-...+.||+|+++++++..-.|++|.+-..+.     ......+.+|.+.|..++|++ +...++|.
T Consensus       218 Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn-~S~r~vtv  296 (420)
T KOG2096|consen  218 GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSN-SSTRAVTV  296 (420)
T ss_pred             CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCC-CcceeEEE
Confidence            99988887765 667789999999999999999999998743221     123457889999999999999 66779999


Q ss_pred             eCCCcEEEEec
Q psy2107         380 SFDNSVKLWDL  390 (391)
Q Consensus       380 ~~dg~v~iwdl  390 (391)
                      |.||+++|||.
T Consensus       297 SkDG~wriwdt  307 (420)
T KOG2096|consen  297 SKDGKWRIWDT  307 (420)
T ss_pred             ecCCcEEEeec
Confidence            99999999996

>KOG0650|consensus

Probab=99.90  E-value=1.6e-22  Score=173.19  Aligned_cols=250  Identities=19%  Similarity=0.248  Sum_probs=184.4

Q ss_pred             CCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         105 PTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       105 ~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      +....+.+.||++.|.||..+  |.+|++|+.||+|+||.+ ++.++.++. ..+.|.||+|.|. ++...||++-.+ .
T Consensus       389 Pt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~-~~~~vLAvA~~~-~  465 (733)
T KOG0650|consen  389 PTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPL-SDLCVLAVAVGE-C  465 (733)
T ss_pred             cceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCC-CCceeEEEEecC-c
Confidence            333445567899999999987  889999999999999999 555555544 5678999999774 334444444333 3


Q ss_pred             EEEEeecCC---------------------------------CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC---
Q psy2107         182 AMIWEWKVE---------------------------------SNSIECIHVCRGHERGLETVTVSESRQQFATGGWD---  225 (391)
Q Consensus       182 v~iwd~~~~---------------------------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---  225 (391)
                      +.+-+-..+                                 .....-+...-.|...|..+.|+..|.+|++...+   
T Consensus       466 ~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~  545 (733)
T KOG0650|consen  466 VLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGN  545 (733)
T ss_pred             eEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCc
Confidence            444431100                                 00001123334578899999999999999987654   


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEeccc
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~  305 (391)
                      ..|.|+++...+                             ....+....+.|.++.|+|..-.+..+....|+|||+..
T Consensus       546 ~~VliHQLSK~~-----------------------------sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~k  596 (733)
T KOG0650|consen  546 KSVLIHQLSKRK-----------------------------SQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSK  596 (733)
T ss_pred             ceEEEEeccccc-----------------------------ccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhH
Confidence            568888886522                             222344456778999999876544444567899999998


Q ss_pred             CceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         306 GGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       306 ~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      +..+..+... ..|..++.+|.|.-|+.|+.|+.+..||+....  .+..++..|...+++++|++ .-.++++|+.||+
T Consensus       597 qelvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlss--kPyk~lr~H~~avr~Va~H~-ryPLfas~sdDgt  673 (733)
T KOG0650|consen  597 QELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSS--KPYKTLRLHEKAVRSVAFHK-RYPLFASGSDDGT  673 (733)
T ss_pred             HHHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCc--chhHHhhhhhhhhhhhhhcc-ccceeeeecCCCc
Confidence            8777666544 488899999999999999999999999987643  24567788999999999999 6668999999999


Q ss_pred             EEEEe
Q psy2107         385 VKLWD  389 (391)
Q Consensus       385 v~iwd  389 (391)
                      +.|+-
T Consensus       674 v~Vfh  678 (733)
T KOG0650|consen  674 VIVFH  678 (733)
T ss_pred             EEEEe
Confidence            99874

>KOG1063|consensus

Probab=99.90  E-value=1.4e-21  Score=170.05  Aligned_cols=273  Identities=20%  Similarity=0.339  Sum_probs=196.7

Q ss_pred             cCCCCcEEEEEecC--CEEEEEECCCeEEEEcCCCc--------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         113 ILHDDWVSAIDFHN--DWILTGCYDHSVHIWTRRGE--------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       113 ~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~~~--------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      .||.++|.++.|++  ..|++++.|.++.+|.....        .+....+..+..+...|   +++++.+++-+..|..
T Consensus       264 ~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw---~~n~~~ii~~g~~Gg~  340 (764)
T KOG1063|consen  264 MGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLW---SPNSNVIIAHGRTGGF  340 (764)
T ss_pred             cCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEE---cCCCCEEEEecccCcE
Confidence            48999999999994  47999999999999987332        12223344556889999   6677899999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCC----CCC----------------
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKER----GDP----------------  242 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----~~~----------------  242 (391)
                      ++|. ......+.......||.+.|+.++|+|.|.+|++.|.|.+-+++-.-..+..    ..+                
T Consensus       341 hlWk-t~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~  419 (764)
T KOG1063|consen  341 HLWK-TKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNED  419 (764)
T ss_pred             EEEe-ccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCC
Confidence            9998 2233455666777899999999999999999999999999888654311100    000                


Q ss_pred             -----------------------------C---------CCCCC---Cccccccc--------cc----cc---------
Q psy2107         243 -----------------------------S---------ENGDE---GTTSKKRK--------KE----YS---------  260 (391)
Q Consensus       243 -----------------------------~---------~~~~~---~~~~~~~~--------~~----~~---------  260 (391)
                                                   .         +.+..   ...+.+..        ..    ..         
T Consensus       420 ~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~  499 (764)
T KOG1063|consen  420 LQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCE  499 (764)
T ss_pred             ceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchh
Confidence                                         0         00000   00000000        00    00         


Q ss_pred             -----------cCCCCCceeeecCccCcccEEEeccCCe-EEEEECC-----CeEEEEecccCceeEEEECCe-eeEEEE
Q psy2107         261 -----------SASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD-----HTLKIWDAELGGMKSEIVGNK-SFFDVH  322 (391)
Q Consensus       261 -----------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~-~i~~~~  322 (391)
                                 .......+..+.+|...|.+++.+|.+. +++++..     ..|++|+..+......+..|+ .|+.++
T Consensus       500 L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~  579 (764)
T KOG1063|consen  500 LTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLA  579 (764)
T ss_pred             ccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEE
Confidence                       0011122345678999999999997665 5555433     469999999998888888888 999999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         323 YSPLSKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |||||++|++.+.|.++.+|........ .-....+.|+.-|.+..|+| ++.+++|+|.|.+|+||..
T Consensus       580 FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~p-de~~FaTaSRDK~VkVW~~  647 (764)
T KOG1063|consen  580 FSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSP-DEKYFATASRDKKVKVWEE  647 (764)
T ss_pred             ECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCc-ccceeEEecCCceEEEEec
Confidence            9999999999999999999987432211 11223678999999999999 6677999999999999975

>KOG2048|consensus

Probab=99.90  E-value=3.9e-21  Score=166.99  Aligned_cols=234  Identities=15%  Similarity=0.254  Sum_probs=187.3

Q ss_pred             CcEEEEEec--CCEEEEEECCCeEEEEcCCCce--EEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH--KLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~--~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      ..|.|+||+  .+.||.+-.||.|-||++...-  ...+. +....|.+++|.    ++..|++.+.+|.|.-||+-   
T Consensus        26 s~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~~drsIE~L~W~----e~~RLFS~g~sg~i~EwDl~---   98 (691)
T KOG2048|consen   26 SEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGPEDRSIESLAWA----EGGRLFSSGLSGSITEWDLH---   98 (691)
T ss_pred             cceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecCCCCceeeEEEc----cCCeEEeecCCceEEEEecc---
Confidence            489999998  5589999999999999995432  22333 345789999994    45678899999999999965   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       ..+....+....+.|.+++.+|.+..++.|+.||.+..++...++.                           .....+
T Consensus        99 -~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I---------------------------~~~r~l  150 (691)
T KOG2048|consen   99 -TLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKI---------------------------TYKRSL  150 (691)
T ss_pred             -cCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceE---------------------------EEEeec
Confidence             5566777777889999999999999999999999877777765332                           122334


Q ss_pred             cCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEE-----C----CeeeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         272 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV-----G----NKSFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~-----~----~~~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                      ...++.|.++.|++.+. +++|+.||.|++||+.++..+....     .    ..-|+++.|-. ...|++|...|+|.+
T Consensus       151 ~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~F  229 (691)
T KOG2048|consen  151 MRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTF  229 (691)
T ss_pred             ccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEE
Confidence            44578899999997776 9999999999999999988766222     1    12467777774 457889999999999


Q ss_pred             EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ||...+.   ++.....|.+.|.+++..+ ++..++++|.|+.|.-+..
T Consensus       230 Wd~~~gT---LiqS~~~h~adVl~Lav~~-~~d~vfsaGvd~~ii~~~~  274 (691)
T KOG2048|consen  230 WDSIFGT---LIQSHSCHDADVLALAVAD-NEDRVFSAGVDPKIIQYSL  274 (691)
T ss_pred             EcccCcc---hhhhhhhhhcceeEEEEcC-CCCeEEEccCCCceEEEEe
Confidence            9988777   7788888999999999998 6667999999999877643

>KOG1273|consensus

Probab=99.90  E-value=6.2e-22  Score=156.98  Aligned_cols=259  Identities=14%  Similarity=0.240  Sum_probs=166.4

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCCCce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRRGEH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      -.|+.|+  |.+||+|+.||.|.|||+.+.. -..+.+|..+|.+++|   +++|++|++++.|..|.+||+..+    .
T Consensus        26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~W---S~dgr~LltsS~D~si~lwDl~~g----s   98 (405)
T KOG1273|consen   26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCW---SRDGRKLLTSSRDWSIKLWDLLKG----S   98 (405)
T ss_pred             cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEe---cCCCCEeeeecCCceeEEEeccCC----C
Confidence            6788998  9999999999999999995544 4467799999999999   889999999999999999997632    2


Q ss_pred             EEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCC-CCCCCC-Cc---------------ccccccc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQ-QFATGGWDCLLKIWSADISKERGDP-SENGDE-GT---------------TSKKRKK  257 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~-~~---------------~~~~~~~  257 (391)
                      +++.+. ..++|....|+|... ..++.-.+..-.+-++..++....+ ...+.. ..               ...+...
T Consensus        99 ~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkl  177 (405)
T KOG1273|consen   99 PLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKL  177 (405)
T ss_pred             ceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceE
Confidence            344433 245566666655322 2222222222233333221111000 000000 00               0000001


Q ss_pred             ccccCCCCCceeeecCcc-CcccEEEec-cCCeEEEEECCCeEEEEecccC-------cee--EEE---ECCeeeEEEEE
Q psy2107         258 EYSSASSRTPLITLKGHK-EAISAVQWT-AVDEIITSSWDHTLKIWDAELG-------GMK--SEI---VGNKSFFDVHY  323 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~-------~~~--~~~---~~~~~i~~~~~  323 (391)
                      ...+..+.+++..++-.. ..|..+.++ .+..|+.-+.|..||.|+++.-       .+.  ..+   .......+++|
T Consensus       178 lv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ccf  257 (405)
T KOG1273|consen  178 LVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCCF  257 (405)
T ss_pred             EEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhheee
Confidence            111222344555554333 678888888 5566889999999999998621       111  011   01225678999


Q ss_pred             CCCCCEEEEeeC-CCcEEEEcCCCCCcceEEEEecccc-CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         324 SPLSKLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHK-EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       324 ~p~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.+|.|+++|+. -..++||.-..+.   ++..+.|.+ .....+.|+| -...+++- ..|.|+||..
T Consensus       258 s~dgeYv~a~s~~aHaLYIWE~~~Gs---LVKILhG~kgE~l~DV~whp-~rp~i~si-~sg~v~iw~~  321 (405)
T KOG1273|consen  258 SGDGEYVCAGSARAHALYIWEKSIGS---LVKILHGTKGEELLDVNWHP-VRPIIASI-ASGVVYIWAV  321 (405)
T ss_pred             cCCccEEEeccccceeEEEEecCCcc---eeeeecCCchhheeeccccc-ceeeeeec-cCCceEEEEe
Confidence            999999998874 3579999988777   888888877 5678899999 44466766 6789999964

>KOG4328|consensus

Probab=99.90  E-value=4.9e-22  Score=164.95  Aligned_cols=242  Identities=21%  Similarity=0.308  Sum_probs=185.2

Q ss_pred             CCCCcEEEEEec---C-CEEEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         114 LHDDWVSAIDFH---N-DWILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       114 ~h~~~V~~~~~~---~-~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      -|.++|++++|+   . +++|+|..-|.|-+||+.+     ..+..+..|.++|.++.|.|.  +...+++.+.||+|+.
T Consensus       184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~--n~s~i~ssSyDGtiR~  261 (498)
T KOG4328|consen  184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPA--NTSQIYSSSYDGTIRL  261 (498)
T ss_pred             ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCC--ChhheeeeccCceeee
Confidence            488999999998   3 5899999999999999932     345567789999999999886  4457999999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      -|++  ....+.+..+......+..+.|+.+...++.|..=|...+||.+++..                          
T Consensus       262 ~D~~--~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s--------------------------  313 (498)
T KOG4328|consen  262 QDFE--GNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGS--------------------------  313 (498)
T ss_pred             eeec--chhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCc--------------------------
Confidence            9965  444444555544556788888998888888888888999999987443                          


Q ss_pred             CCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCc-----eeEEEECCeeeEEEEECCCCCEEEEeeCCC
Q psy2107         265 RTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGG-----MKSEIVGNKSFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg  337 (391)
                        ....+.-|...|..++++|-  ..|++++.|++++|||++.-.     .+.++.+...|.+..|||.+..|++.+.|.
T Consensus       314 --~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~  391 (498)
T KOG4328|consen  314 --EYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDN  391 (498)
T ss_pred             --cchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCC
Confidence              34455668889999999964  459999999999999998533     245556667999999999988899999999


Q ss_pred             cEEEEcCCCC-CcceEEEEeccccC------cEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         338 QIRLYDPKVK-EGAIVKSTFSSHKE------WVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       338 ~i~iwd~~~~-~~~~~~~~~~~h~~------~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .|+|||...- ....+...+. |..      .....+|.| +..+++.|-.-..|-|+|
T Consensus       392 ~IRv~dss~~sa~~~p~~~I~-Hn~~t~RwlT~fKA~W~P-~~~li~vg~~~r~IDv~~  448 (498)
T KOG4328|consen  392 EIRVFDSSCISAKDEPLGTIP-HNNRTGRWLTPFKAAWDP-DYNLIVVGRYPRPIDVFD  448 (498)
T ss_pred             ceEEeecccccccCCccceee-ccCcccccccchhheeCC-CccEEEEeccCcceeEEc
Confidence            9999997310 1111222221 221      245567999 677899888877787776

>KOG2106|consensus

Probab=99.90  E-value=3.6e-20  Score=155.83  Aligned_cols=283  Identities=17%  Similarity=0.286  Sum_probs=199.0

Q ss_pred             cCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCCceEE----eccC-CCCCee
Q psy2107          88 KGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRGEHKL----NIPG-HGGPVK  159 (391)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~----~~~~-~~~~v~  159 (391)
                      ...+.+..+.+|..++.....+..  .-.+.|....|+   ++++++.+ .|.+.+|+..+..+.    .+.. ....|.
T Consensus       174 vD~s~~h~lSVWdWqk~~~~~~vk--~sne~v~~a~FHPtd~nliit~G-k~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl  250 (626)
T KOG2106|consen  174 VDDSNPHMLSVWDWQKKAKLGPVK--TSNEVVFLATFHPTDPNLIITCG-KGHLYFWTLRGGSLVKRQGIFEKREKKFVL  250 (626)
T ss_pred             ecCCCccccchhhchhhhccCcce--eccceEEEEEeccCCCcEEEEeC-CceEEEEEccCCceEEEeeccccccceEEE
Confidence            445678888888876554433322  245678888898   34666655 489999998654333    2222 336799


Q ss_pred             EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCC
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKER  239 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~  239 (391)
                      |++|.+   ++ -+++|..+|.|.||+..    ..+..+....|.+.|.+++.-.+|. |++|+.|+.|..||-+-.+..
T Consensus       251 ~v~F~e---ng-dviTgDS~G~i~Iw~~~----~~~~~k~~~aH~ggv~~L~~lr~Gt-llSGgKDRki~~Wd~~y~k~r  321 (626)
T KOG2106|consen  251 CVTFLE---NG-DVITGDSGGNILIWSKG----TNRISKQVHAHDGGVFSLCMLRDGT-LLSGGKDRKIILWDDNYRKLR  321 (626)
T ss_pred             EEEEcC---CC-CEEeecCCceEEEEeCC----CceEEeEeeecCCceEEEEEecCcc-EeecCccceEEeccccccccc
Confidence            999954   33 38899999999999932    3344444558999999999999997 555999999999993322221


Q ss_pred             C--CCCCCCCCCc---------cccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCc
Q psy2107         240 G--DPSENGDEGT---------TSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       240 ~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      .  .+...+....         ....+...........--....+|......++.+|+ ..+++++.|+.+++|+  ..+
T Consensus       322 ~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k  399 (626)
T KOG2106|consen  322 ETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHK  399 (626)
T ss_pred             cccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCc
Confidence            1  1111111000         000011111111112222345578888899998854 5699999999999999  677


Q ss_pred             eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      +..+.....+..|+.|+|.| .+|.|+..|...+.|.++..   ++..-.. ..++++++|+| ++.+||.|+.|+.|+|
T Consensus       400 ~~wt~~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~---lv~~~~d-~~~ls~v~ysp-~G~~lAvgs~d~~iyi  473 (626)
T KOG2106|consen  400 LEWTKIIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQD---LVTIHTD-NEQLSVVRYSP-DGAFLAVGSHDNHIYI  473 (626)
T ss_pred             eeEEEEecCceeEeeccCcc-eEEEeeccceEEEEecccce---eEEEEec-CCceEEEEEcC-CCCEEEEecCCCeEEE
Confidence            88888888899999999999 99999999999999988754   4444444 88999999999 6778999999999999


Q ss_pred             Eec
Q psy2107         388 WDL  390 (391)
Q Consensus       388 wdl  390 (391)
                      |.+
T Consensus       474 y~V  476 (626)
T KOG2106|consen  474 YRV  476 (626)
T ss_pred             EEE
Confidence            965

>KOG0322|consensus

Probab=99.89  E-value=3.2e-22  Score=154.75  Aligned_cols=252  Identities=20%  Similarity=0.265  Sum_probs=182.7

Q ss_pred             CcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCCCce-EEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEH-KLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~-~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      +.+.+|.+.|+++.|. .++|.+|..-|.|++|+++++. ...+. .+...|+.+.-.|+    ..+.+-+.|+.+.+|+
T Consensus         8 fvLRp~~~~v~s~~fqa~~rL~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~----d~l~tqgRd~~L~lw~   83 (323)
T KOG0322|consen    8 FVLRPHSSSVTSVLFQANERLMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN----DSLDTQGRDPLLILWT   83 (323)
T ss_pred             eEeccccchheehhhccchhhhcccccceEEEEEeecCccchhhhhhccceeeceeecCC----cchhhcCCCceEEEEE
Confidence            3455799999999998 6789999999999999995543 33444 56778888887553    4688889999999998


Q ss_pred             ecCCCCceeEEEEE---------------------------------------------------ecCCCCeEEEEEcC-
Q psy2107         187 WKVESNSIECIHVC---------------------------------------------------RGHERGLETVTVSE-  214 (391)
Q Consensus       187 ~~~~~~~~~~~~~~---------------------------------------------------~~~~~~v~~l~~~~-  214 (391)
                      +...  ....++.+                                                   .+..+.+.|..+.. 
T Consensus        84 ia~s--~~i~i~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~  161 (323)
T KOG0322|consen   84 IAYS--AFISIHSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHA  161 (323)
T ss_pred             ccCc--ceEEEeeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeecccc
Confidence            6421  00000000                                                   01123455555322 


Q ss_pred             CC--CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEE
Q psy2107         215 SR--QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIIT  291 (391)
Q Consensus       215 ~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s  291 (391)
                      .+  -++++|.++|.+.+||+.++.......                   ...+.......|..+|.++.|.+ .+.=++
T Consensus       162 c~s~~lllaGyEsghvv~wd~S~~~~~~~~~-------------------~~~kv~~~~ash~qpvlsldyas~~~rGis  222 (323)
T KOG0322|consen  162 CGSTFLLLAGYESGHVVIWDLSTGDKIIQLP-------------------QSSKVESPNASHKQPVLSLDYASSCDRGIS  222 (323)
T ss_pred             ccceEEEEEeccCCeEEEEEccCCceeeccc-------------------cccccccchhhccCcceeeeechhhcCCcC
Confidence            22  246778899999999998753322111                   11223444567999999999983 344577


Q ss_pred             EECCCeEEEEecccC--ce--eEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         292 SSWDHTLKIWDAELG--GM--KSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       292 ~~~dg~i~iwd~~~~--~~--~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      |+.+..+..|++...  .+  ..+.. .+..+..+.+-||++.+|+++.|+.||||..++..   ++..+.-|+..|+++
T Consensus       223 gga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~---pLAVLkyHsagvn~v  299 (323)
T KOG0322|consen  223 GGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLN---PLAVLKYHSAGVNAV  299 (323)
T ss_pred             CCccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCC---chhhhhhhhcceeEE
Confidence            888888999988643  21  12222 23467889999999999999999999999999887   788889999999999


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEec
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+| +..++|++|.|+.|.+|+|
T Consensus       300 Afsp-d~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  300 AFSP-DCELMAAASKDARISLWKL  322 (323)
T ss_pred             EeCC-CCchhhhccCCceEEeeec
Confidence            9999 6678999999999999997

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.89  E-value=7.5e-20  Score=157.83  Aligned_cols=253  Identities=11%  Similarity=0.082  Sum_probs=165.6

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEE-EEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecC
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      .++.+.+|......   ......+...+.+++|+  ++.+ ++++.++.|++||..+ +....+..+.. +..++|   +
T Consensus         9 ~d~~v~~~d~~t~~---~~~~~~~~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~---~   81 (300)
T TIGR03866         9 KDNTISVIDTATLE---VTRTFPVGQRPRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFAL---H   81 (300)
T ss_pred             CCCEEEEEECCCCc---eEEEEECCCCCCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEE---C
Confidence            34566666543222   11122223345678887  4555 6777899999999954 44444554433 567888   6


Q ss_pred             CCCeEEE-EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCCCCCCCCCC
Q psy2107         168 GKDAAFI-SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-LLKIWSADISKERGDPSEN  245 (391)
Q Consensus       168 ~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~~~~  245 (391)
                      ++++.++ +++.++.+++||+.    ....+..+.. ...+.+++|+|+++++++++.++ .+.+||.++.+        
T Consensus        82 ~~g~~l~~~~~~~~~l~~~d~~----~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~--------  148 (300)
T TIGR03866        82 PNGKILYIANEDDNLVTVIDIE----TRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYE--------  148 (300)
T ss_pred             CCCCEEEEEcCCCCeEEEEECC----CCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCe--------
Confidence            6676655 45568999999965    2234444442 33568899999999999988775 46677886532        


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCceeEEEECCe-------
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGMKSEIVGNK-------  316 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~~~~~~~~~-------  316 (391)
                                           ...... ......+++|++++. ++++ ..++.|++||+.+++.+..+..+.       
T Consensus       149 ---------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~  206 (300)
T TIGR03866       149 ---------------------IVDNVL-VDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEA  206 (300)
T ss_pred             ---------------------EEEEEE-cCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeeccccccccc
Confidence                                 122221 123456789996664 5444 469999999999988776654321       


Q ss_pred             -eeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEE-eeCCCcEEEEecC
Q psy2107         317 -SFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS-ASFDNSVKLWDLR  391 (391)
Q Consensus       317 -~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s-~~~dg~v~iwdlr  391 (391)
                       ....++|+|+++++++ ...++.+.+||+++.+   ....+ .+...+.+++|+|++. +|++ ++.+|.|++||++
T Consensus       207 ~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~---~~~~~-~~~~~~~~~~~~~~g~-~l~~~~~~~~~i~v~d~~  279 (300)
T TIGR03866       207 VQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYE---VLDYL-LVGQRVWQLAFTPDEK-YLLTTNGVSNDVSVIDVA  279 (300)
T ss_pred             CCccceEECCCCCEEEEEcCCCCeEEEEECCCCc---EEEEE-EeCCCcceEEECCCCC-EEEEEcCCCCeEEEEECC
Confidence             2346889999997554 3456789999987654   33333 2445799999999555 5555 4679999999974

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG4378|consensus

Probab=99.89  E-value=1.3e-21  Score=164.17  Aligned_cols=258  Identities=13%  Similarity=0.185  Sum_probs=185.8

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEE--ECCCeEEEEcCCCc---e--EEeccCCCCCeeEEE
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTG--CYDHSVHIWTRRGE---H--KLNIPGHGGPVKGVA  162 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~--~~dg~i~iwd~~~~---~--~~~~~~~~~~v~~l~  162 (391)
                      +....+.+|+..............-...+.++.|+ .+.|+++  +.|..+++|.-.++   .  +....+.  .-.|++
T Consensus         9 S~gd~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp~~~k~~gd--~~~Cv~   86 (673)
T KOG4378|consen    9 STGDKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVPRVRKLTGD--NAFCVA   86 (673)
T ss_pred             ccCCceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCCCCccceeeccccc--hHHHHh
Confidence            45667777776654433222111112238888887 4445544  56778999987554   1  1222222  334444


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP  242 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~  242 (391)
                      .   .....++++|+..+.|+|||++    ...+.+.+.+|...|+++.++-...+||+++..|.|.+..+.++..    
T Consensus        87 ~---~s~S~y~~sgG~~~~Vkiwdl~----~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~----  155 (673)
T KOG4378|consen   87 C---ASQSLYEISGGQSGCVKIWDLR----AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQK----  155 (673)
T ss_pred             h---hhcceeeeccCcCceeeehhhH----HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCcc----
Confidence            4   2234789999999999999976    4456778889999999999999999999999999999999876432    


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecCc-cCcccEEEeccCCe--EEEEECCCeEEEEecccCceeEEEE--CCee
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKSEIV--GNKS  317 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~  317 (391)
                                               ...+... ...|.-+.|++..+  |.+++.+|.|.+||+....++..+.  +..+
T Consensus       156 -------------------------tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP  210 (673)
T KOG4378|consen  156 -------------------------TTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAP  210 (673)
T ss_pred             -------------------------ccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhccCC
Confidence                                     2223322 34456888996554  7788999999999998777766553  3348


Q ss_pred             eEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         318 FFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       318 i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...++|+|... +|++.+.|..|.+||.+...   ....+ ....+.+.++|++ ++.+|+.|...|.|..||+|
T Consensus       211 ~~gicfspsne~l~vsVG~Dkki~~yD~~s~~---s~~~l-~y~~Plstvaf~~-~G~~L~aG~s~G~~i~YD~R  280 (673)
T KOG4378|consen  211 CRGICFSPSNEALLVSVGYDKKINIYDIRSQA---STDRL-TYSHPLSTVAFSE-CGTYLCAGNSKGELIAYDMR  280 (673)
T ss_pred             cCcceecCCccceEEEecccceEEEeeccccc---cccee-eecCCcceeeecC-CceEEEeecCCceEEEEecc
Confidence            88899999755 77788999999999998654   22222 2456789999999 77899999999999999997

>KOG0290|consensus

Probab=99.89  E-value=3.7e-21  Score=150.90  Aligned_cols=244  Identities=15%  Similarity=0.256  Sum_probs=180.3

Q ss_pred             cEEEEEec-----CCEEEEEEC----CCeEEEEcC--CCceEEe--ccCCCCCeeEEEEEecCC--CCeEEEEEeCCCcE
Q psy2107         118 WVSAIDFH-----NDWILTGCY----DHSVHIWTR--RGEHKLN--IPGHGGPVKGVAWLYNDG--KDAAFISVSTDQTA  182 (391)
Q Consensus       118 ~V~~~~~~-----~~~l~t~~~----dg~i~iwd~--~~~~~~~--~~~~~~~v~~l~~~~~~~--~~~~l~s~~~dg~v  182 (391)
                      .+.++.|+     ..+||.|+.    .+.|.|-.+  .+.....  -..|..+++.+.|.|.+.  .-.+||++  +..+
T Consensus        46 ~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs--~D~L  123 (364)
T KOG0290|consen   46 PLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATS--SDFL  123 (364)
T ss_pred             ceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcc--cCeE
Confidence            45677776     348888874    356776654  2222222  237999999999988542  12355554  3479


Q ss_pred             EEEeecCCCCceeEEEEEe-----cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCR-----GHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~-----~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      |+|.+..+.....+...+.     .+..++++..|+. +-++|.+.+-|.+..|||++++..                  
T Consensus       124 RlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~------------------  185 (364)
T KOG0290|consen  124 RLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS------------------  185 (364)
T ss_pred             EEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc------------------
Confidence            9999765444444333332     3457899999987 668899999999999999987421                  


Q ss_pred             cccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEE---C-CeeeEEEEECCCC-CE
Q psy2107         257 KEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIV---G-NKSFFDVHYSPLS-KL  329 (391)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~---~-~~~i~~~~~~p~~-~~  329 (391)
                              ......+-.|.+.|..++|..+  +.|++.+.||.+|+||++.......+.   . +.+...++|++.. ++
T Consensus       186 --------~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpny  257 (364)
T KOG0290|consen  186 --------GTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNY  257 (364)
T ss_pred             --------cceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchH
Confidence                    2244567789999999999953  459999999999999999765443332   2 4478899999864 56


Q ss_pred             EEEeeC-CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         330 VITASA-DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       330 l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+-.. ...|.|.|++...  .++..+.+|.+.|++++|.|.....++|||+|..+.+|||.
T Consensus       258 mATf~~dS~~V~iLDiR~P~--tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~  318 (364)
T KOG0290|consen  258 MATFAMDSNKVVILDIRVPC--TPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQ  318 (364)
T ss_pred             HhhhhcCCceEEEEEecCCC--cceehhhcCcccccceEecCCCCceeeecCCcceEEEEecc
Confidence            766544 4679999998754  35678999999999999999888999999999999999984

>KOG0642|consensus

Probab=99.89  E-value=5e-22  Score=169.06  Aligned_cols=246  Identities=22%  Similarity=0.294  Sum_probs=184.6

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---------CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---------GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---------~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      +++..|.+.|++++|.  ...|++++.||+|++|++.         -+.+.++.+|.++|.|++.   ..++..+++|+.
T Consensus       288 ~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v---~~n~~~~ysgg~  364 (577)
T KOG0642|consen  288 FTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVV---PSNGEHCYSGGI  364 (577)
T ss_pred             eeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEe---cCCceEEEeecc
Confidence            3566799999999998  4599999999999999982         1456788999999999999   678999999999


Q ss_pred             CCcEEEEeecCCC------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         179 DQTAMIWEWKVES------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       179 dg~v~iwd~~~~~------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      ||+|+.|++....      ........+.||.+.|..+++++....|++++.||++++|+......              
T Consensus       365 Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~--------------  430 (577)
T KOG0642|consen  365 DGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP--------------  430 (577)
T ss_pred             CceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc--------------
Confidence            9999999754111      11134467789999999999999999999999999999999854222              


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECC--------eeeEEEE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGN--------KSFFDVH  322 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~i~~~~  322 (391)
                                    +........+.-.++.+....  ..++...-+.-.+++......+..+...        ..+..+.
T Consensus       431 --------------~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vV  496 (577)
T KOG0642|consen  431 --------------CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVV  496 (577)
T ss_pred             --------------cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEE
Confidence                          011111112223344443222  1223333344444555555444444321        2467788


Q ss_pred             ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.|.+.+.+++..|+.|+++|..++.   ++.....|...++++++.| ++-+|++++.||.+++|.+
T Consensus       497 s~~~~~~~~~~hed~~Ir~~dn~~~~---~l~s~~a~~~svtslai~~-ng~~l~s~s~d~sv~l~kl  560 (577)
T KOG0642|consen  497 SHPTADITFTAHEDRSIRFFDNKTGK---ILHSMVAHKDSVTSLAIDP-NGPYLMSGSHDGSVRLWKL  560 (577)
T ss_pred             ecCCCCeeEecccCCceecccccccc---cchheeeccceecceeecC-CCceEEeecCCceeehhhc
Confidence            99999999999999999999998877   7888889999999999999 6678999999999999976

>KOG0321|consensus

Probab=99.88  E-value=2.6e-21  Score=166.93  Aligned_cols=256  Identities=14%  Similarity=0.226  Sum_probs=172.5

Q ss_pred             CCEEEEEECCCeEEEEcCCCc-------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107         126 NDWILTGCYDHSVHIWTRRGE-------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~-------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      ...|+.+..||.|.++|.+..       ++.....|.++|..+.|.   +....|++++.|.++++||+.  .....-..
T Consensus        64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wa---pge~~lVsasGDsT~r~Wdvk--~s~l~G~~  138 (720)
T KOG0321|consen   64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWA---PGESLLVSASGDSTIRPWDVK--TSRLVGGR  138 (720)
T ss_pred             cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccC---CCceeEEEccCCceeeeeeec--cceeecce
Confidence            348999999999999998432       234556899999999994   456789999999999999965  33333344


Q ss_pred             EEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc--
Q psy2107         199 VCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK--  275 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  275 (391)
                      .+.+|.+.|.+++|.|. ...|++|+.||.|.|||++-............ ......... -......+.+...+.+.  
T Consensus       139 ~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~-~~~~~n~~p-tpskp~~kr~~k~kA~s~t  216 (720)
T KOG0321|consen  139 LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNR-IYGRHNTAP-TPSKPLKKRIRKWKAASNT  216 (720)
T ss_pred             eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhh-hhccccCCC-CCCchhhccccccccccCc
Confidence            58899999999999995 46789999999999999976442110000000 000000000 00000011112222333  


Q ss_pred             --CcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEE--------ECC----eeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         276 --EAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEI--------VGN----KSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       276 --~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~--------~~~----~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                        +.|+.+.|-++..|++++. |+.|++||++........        ..+    ..+.++.....|.+|.+.+.|+.|+
T Consensus       217 i~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy  296 (720)
T KOG0321|consen  217 IFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIY  296 (720)
T ss_pred             eeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEE
Confidence              3466677778888999987 999999999875443221        111    2678888888899999888899999


Q ss_pred             EEcCCCCCcceEEEEeccccC--cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKE--WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|++...... ++..+.++..  .-..-..+| ++.++++|+.|...++|.+
T Consensus       297 ~ynm~s~s~s-P~~~~sg~~~~sf~vks~lSp-d~~~l~SgSsd~~ayiw~v  346 (720)
T KOG0321|consen  297 FYNMRSLSIS-PVAEFSGKLNSSFYVKSELSP-DDCSLLSGSSDEQAYIWVV  346 (720)
T ss_pred             EEeccccCcC-chhhccCcccceeeeeeecCC-CCceEeccCCCcceeeeee
Confidence            9999875422 3344444432  112223678 5568999999999999986

>KOG1539|consensus

Probab=99.88  E-value=1.4e-20  Score=167.18  Aligned_cols=231  Identities=17%  Similarity=0.215  Sum_probs=185.0

Q ss_pred             CcEEEEEec-------CCEEEEEECCCeEEEEcCCCceEE--e-----ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         117 DWVSAIDFH-------NDWILTGCYDHSVHIWTRRGEHKL--N-----IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       117 ~~V~~~~~~-------~~~l~t~~~dg~i~iwd~~~~~~~--~-----~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      .+|..+++.       .+.+++--.+..++.|+.......  .     +......+++++.   +.-|++.+.|...|.|
T Consensus       396 p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~v---s~CGNF~~IG~S~G~I  472 (910)
T KOG1539|consen  396 PPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCV---SFCGNFVFIGYSKGTI  472 (910)
T ss_pred             CcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEE---eccCceEEEeccCCeE
Confidence            478888886       345666667789999998544332  1     2223477888888   7789999999999999


Q ss_pred             EEEeecCCCCceeEEEEE---ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVC---RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      -+|++.    .+.....+   ..|.++|+.++...-++.+++++.+|.+++||.....                      
T Consensus       473 d~fNmQ----SGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~----------------------  526 (910)
T KOG1539|consen  473 DRFNMQ----SGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV----------------------  526 (910)
T ss_pred             EEEEcc----cCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc----------------------
Confidence            999964    33344445   4799999999999999999999999999999997622                      


Q ss_pred             ccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCC
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg  337 (391)
                             .+..+. -...+.++.++ ..+.++.+..|-.|+++|..+.+..+.+.+|+ .|++++|||||++|++++.|+
T Consensus       527 -------l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~  598 (910)
T KOG1539|consen  527 -------LKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS  598 (910)
T ss_pred             -------eeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC
Confidence                   333333 24567778777 56778899999999999999999999999776 899999999999999999999


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC-CcEEEEe
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWD  389 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~v~iwd  389 (391)
                      +|++||+.++.   ++-.+. -..+++++.|+| ++.+|||...| .-|++|-
T Consensus       599 tIr~wDlpt~~---lID~~~-vd~~~~sls~SP-ngD~LAT~Hvd~~gIylWs  646 (910)
T KOG1539|consen  599 TIRTWDLPTGT---LIDGLL-VDSPCTSLSFSP-NGDFLATVHVDQNGIYLWS  646 (910)
T ss_pred             cEEEEeccCcc---eeeeEe-cCCcceeeEECC-CCCEEEEEEecCceEEEEE
Confidence            99999998876   554443 567899999999 77799999988 6799994

>KOG0303|consensus

Probab=99.88  E-value=4e-21  Score=156.77  Aligned_cols=208  Identities=22%  Similarity=0.355  Sum_probs=166.3

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC---CceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCC
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES---NSIECIHVCRGHERGLETVTVSES-RQQFATGGWD  225 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~d  225 (391)
                      .+.+|.++|..++|+|.  +...||+|+.|.+|.||++....   .-..++..+.+|...|--++|+|. .+.|++++.|
T Consensus        76 ~v~GHt~~vLDi~w~Pf--nD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~D  153 (472)
T KOG0303|consen   76 LVCGHTAPVLDIDWCPF--NDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSD  153 (472)
T ss_pred             CccCccccccccccCcc--CCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCC
Confidence            45699999999999887  66789999999999999965322   123567888999999999999995 4678999999


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecc
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~  304 (391)
                      ..|.+|++.+++                             .+.++. |...|.++.|+ +++.+++++.|..|||||.+
T Consensus       154 n~v~iWnv~tge-----------------------------ali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr  203 (472)
T KOG0303|consen  154 NTVSIWNVGTGE-----------------------------ALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPR  203 (472)
T ss_pred             ceEEEEeccCCc-----------------------------eeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCC
Confidence            999999998854                             445565 99999999999 77789999999999999999


Q ss_pred             cCceeEEEECCe--eeEEEEECCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         305 LGGMKSEIVGNK--SFFDVHYSPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       305 ~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      +++.+..-..|.  .-..+.|-.+|..+.+|.   .+..+-+||....+.+.....+...+ .|.-=-|.++.+-+.+.|
T Consensus       204 ~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSn-Gvl~PFyD~dt~ivYl~G  282 (472)
T KOG0303|consen  204 RGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSN-GVLLPFYDPDTSIVYLCG  282 (472)
T ss_pred             CCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCC-ceEEeeecCCCCEEEEEe
Confidence            999998886654  445667778888666663   46889999998877666666666444 455555788655556667


Q ss_pred             eCCCcEEEEec
Q psy2107         380 SFDNSVKLWDL  390 (391)
Q Consensus       380 ~~dg~v~iwdl  390 (391)
                      -.|+.||.|.+
T Consensus       283 KGD~~IRYyEi  293 (472)
T KOG0303|consen  283 KGDSSIRYFEI  293 (472)
T ss_pred             cCCcceEEEEe
Confidence            78999999876

>KOG1188|consensus

Probab=99.87  E-value=6e-21  Score=152.99  Aligned_cols=232  Identities=13%  Similarity=0.255  Sum_probs=173.0

Q ss_pred             CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC-
Q psy2107         127 DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE-  204 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-  204 (391)
                      ..+|++...|.|++||. +++.+..+.++...+..+.|+..+ ....+.+|+.||+|++||++....  .....+..+. 
T Consensus        41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~d-s~h~v~s~ssDG~Vr~wD~Rs~~e--~a~~~~~~~~~  117 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCD-SPHGVISCSSDGTVRLWDIRSQAE--SARISWTQQSG  117 (376)
T ss_pred             eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCC-CCCeeEEeccCCeEEEEEeecchh--hhheeccCCCC
Confidence            57899999999999999 677888999999999999997642 456799999999999999875433  3334444554 


Q ss_pred             CCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107         205 RGLETVTVSESRQQFATGG----WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA  280 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  280 (391)
                      .+..|++.+-+++.+++|.    .+-.+.+||++..++.                           .......|...|++
T Consensus       118 ~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~---------------------------l~~~~eSH~DDVT~  170 (376)
T KOG1188|consen  118 TPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQL---------------------------LRQLNESHNDDVTQ  170 (376)
T ss_pred             CcceEeeccCcCCeEEeccccccCceEEEEEEeccccch---------------------------hhhhhhhccCccee
Confidence            5778888887888888886    3678999999874431                           22234579999999


Q ss_pred             EEeccC--CeEEEEECCCeEEEEecccC----ceeEEEECCeeeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCc----
Q psy2107         281 VQWTAV--DEIITSSWDHTLKIWDAELG----GMKSEIVGNKSFFDVHYSPLS-KLVITASADKQIRLYDPKVKEG----  349 (391)
Q Consensus       281 ~~~~~~--~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~----  349 (391)
                      +.|+|.  +.|++||.||.|.+||++..    .++.++.....|.++.|...+ +.|.+-+..+...+|+++.+..    
T Consensus       171 lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~  250 (376)
T KOG1188|consen  171 LRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWL  250 (376)
T ss_pred             EEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcc
Confidence            999954  56999999999999999754    244556666678888887665 3466666777788887654320    


Q ss_pred             ------------------------------------------------------ceEEEEecc-ccCcEEEEEECCCCCC
Q psy2107         350 ------------------------------------------------------AIVKSTFSS-HKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       350 ------------------------------------------------------~~~~~~~~~-h~~~v~~~~~~~~~~~  374 (391)
                                                                            ......+.+ |...|+++.|.. .+.
T Consensus       251 ~~~~~~~~d~r~~~~~dY~I~~~~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~-~~~  329 (376)
T KOG1188|consen  251 ENPDVSADDLRKEDNCDYVINEHSPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDV-KND  329 (376)
T ss_pred             cCccchhhhHHhhhhhhheeecccCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhc-ccc
Confidence                                                                  001112222 566678888876 567


Q ss_pred             EEEEeeCCCcEEEEe
Q psy2107         375 LFVSASFDNSVKLWD  389 (391)
Q Consensus       375 ~l~s~~~dg~v~iwd  389 (391)
                      ++.|||.||.+.+|.
T Consensus       330 ~l~TGGEDG~l~~Wk  344 (376)
T KOG1188|consen  330 VLYTGGEDGLLQAWK  344 (376)
T ss_pred             eeeccCCCceEEEEe
Confidence            899999999999996

>KOG1007|consensus

Probab=99.87  E-value=4.6e-20  Score=144.70  Aligned_cols=266  Identities=18%  Similarity=0.290  Sum_probs=186.7

Q ss_pred             ccceEEEEEEeccCC-CCCCcccCCCCcEEEEEec---CCEEEEEECC-------CeEEEEcCCCc----------eEEe
Q psy2107          92 SENVIDVEYLESTPT-PSPLDCILHDDWVSAIDFH---NDWILTGCYD-------HSVHIWTRRGE----------HKLN  150 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~-~~~~~~~~h~~~V~~~~~~---~~~l~t~~~d-------g~i~iwd~~~~----------~~~~  150 (391)
                      .++.+.+-+...... .....++.|.+.|..++-+   ...|+|+..+       -.+.||.+...          .+..
T Consensus        38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~  117 (370)
T KOG1007|consen   38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVAS  117 (370)
T ss_pred             CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhc
Confidence            455555554433322 2234556688899999887   4477776553       25789987211          1222


Q ss_pred             cc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE-E-EecCCCCeEEEEEcC--CCCEEEEEeCC
Q psy2107         151 IP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH-V-CRGHERGLETVTVSE--SRQQFATGGWD  225 (391)
Q Consensus       151 ~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-~-~~~~~~~v~~l~~~~--~~~~l~sg~~d  225 (391)
                      +. .+-+.|.|+.|.   |++..+++-. |..|.+|++.........+. . -.++....++-+|+|  +++.+++. .|
T Consensus       118 Ldteavg~i~cvew~---Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d  192 (370)
T KOG1007|consen  118 LDTEAVGKINCVEWE---PNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SD  192 (370)
T ss_pred             CCHHHhCceeeEEEc---CCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CC
Confidence            22 344689999995   4666777655 88999999764332111111 1 113566788899998  67766665 57


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe--EEEEECCCeEEEEec
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDA  303 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~  303 (391)
                      +++..||+++.+.                            ....-..|...|..+.|+|+..  |++|+.||.|+|||.
T Consensus       193 ~tl~~~D~RT~~~----------------------------~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~  244 (370)
T KOG1007|consen  193 STLQFWDLRTMKK----------------------------NNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDT  244 (370)
T ss_pred             CcEEEEEccchhh----------------------------hcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEec
Confidence            8999999987443                            2223347888899999998654  899999999999999


Q ss_pred             ccC-ceeEEEECCe-eeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCC--------------------------cceEEE
Q psy2107         304 ELG-GMKSEIVGNK-SFFDVHYSPL-SKLVITASADKQIRLYDPKVKE--------------------------GAIVKS  354 (391)
Q Consensus       304 ~~~-~~~~~~~~~~-~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~--------------------------~~~~~~  354 (391)
                      +.. .+++++..|. .++++.|+|. .+++++|+.|..|.+|....-.                          ..-.+.
T Consensus       245 R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~  324 (370)
T KOG1007|consen  245 RKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLE  324 (370)
T ss_pred             cCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccc
Confidence            865 4677777766 8999999997 5688899999999999643211                          011344


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++..|...|.+++|+..++.+||+-+.||.+.|=.+
T Consensus       325 tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V  360 (370)
T KOG1007|consen  325 TYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSV  360 (370)
T ss_pred             cccccccceEEEeeccCCCeeEEEeccCceEEeecC
Confidence            777899999999999989999999999999987543

>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein

Probab=99.87  E-value=3.3e-19  Score=153.82  Aligned_cols=224  Identities=10%  Similarity=0.088  Sum_probs=155.7

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      ++.+++++.||.|++||+ +++....+..+ ..+.+++|   ++++..+ ++++.++.|++||..  .  .+....+..+
T Consensus         1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~-~~~~~l~~---~~dg~~l~~~~~~~~~v~~~d~~--~--~~~~~~~~~~   72 (300)
T TIGR03866         1 EKAYVSNEKDNTISVIDTATLEVTRTFPVG-QRPRGITL---SKDGKLLYVCASDSDTIQVIDLA--T--GEVIGTLPSG   72 (300)
T ss_pred             CcEEEEecCCCEEEEEECCCCceEEEEECC-CCCCceEE---CCCCCEEEEEECCCCeEEEEECC--C--CcEEEeccCC
Confidence            357889999999999999 45555566544 34678999   6677755 667789999999954  2  2344444444


Q ss_pred             CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      . .+..++|+|+++.++++ +.++.|++||+++.+                             .+..+. +...+.+++
T Consensus        73 ~-~~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~-----------------------------~~~~~~-~~~~~~~~~  121 (300)
T TIGR03866        73 P-DPELFALHPNGKILYIANEDDNLVTVIDIETRK-----------------------------VLAEIP-VGVEPEGMA  121 (300)
T ss_pred             C-CccEEEECCCCCEEEEEcCCCCeEEEEECCCCe-----------------------------EEeEee-CCCCcceEE
Confidence            3 35688999999877654 568999999997632                             233333 223467899


Q ss_pred             eccCCe-EEEEECCC-eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         283 WTAVDE-IITSSWDH-TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       283 ~~~~~~-l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      |+|++. +++++.++ .+.+||..+++.............++|+|++++|+++ ..++.|++||+++.+   ....+..+
T Consensus       122 ~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~---~~~~~~~~  198 (300)
T TIGR03866       122 VSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRK---VIKKITFE  198 (300)
T ss_pred             ECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcce---eeeeeeec
Confidence            997665 56666554 5778899888776665555566789999999988654 468999999998764   33333211


Q ss_pred             -------cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         360 -------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       360 -------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                             ......++|+|++..++++.+.++.+.+||++
T Consensus       199 ~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~  237 (300)
T TIGR03866       199 IPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAK  237 (300)
T ss_pred             ccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECC
Confidence                   11235688999655545666667789999974

Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.

>KOG0307|consensus

Probab=99.87  E-value=7.6e-22  Score=181.12  Aligned_cols=229  Identities=17%  Similarity=0.257  Sum_probs=170.5

Q ss_pred             ECCCeEEEEcCC---Cc---eEEeccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecC--CCCceeEEEEEecC
Q psy2107         133 CYDHSVHIWTRR---GE---HKLNIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKV--ESNSIECIHVCRGH  203 (391)
Q Consensus       133 ~~dg~i~iwd~~---~~---~~~~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~--~~~~~~~~~~~~~~  203 (391)
                      +.+.++-||.+.   ..   +..--..-....+.++|.+...+ ..+|+.|..||.|.+||...  .......+..+..|
T Consensus        36 st~~slEifeld~~~~~~dlk~~~s~~s~~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h  115 (1049)
T KOG0307|consen   36 STSASLEIFELDFSDESSDLKPVGSLQSSNRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKH  115 (1049)
T ss_pred             ccccccceeeecccCccccccccccccccccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhccc
Confidence            445667777552   11   11111234567889999654221 12689999999999999654  23445567778899


Q ss_pred             CCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      .+.|..+.|++.+ ++||+|+.||.|.|||+...+.-.                         .+-  -....+.|.+++
T Consensus       116 ~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~-------------------------~~~--~~~~~~eI~~ls  168 (1049)
T KOG0307|consen  116 TGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPF-------------------------TPG--SQAPPSEIKCLS  168 (1049)
T ss_pred             CCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCC-------------------------CCC--CCCCcccceEec
Confidence            9999999999965 599999999999999997633211                         000  112456799999


Q ss_pred             ecc--CCeEEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCCC-EEEEeeCC---CcEEEEcCCCCCcceEE
Q psy2107         283 WTA--VDEIITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSK-LVITASAD---KQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       283 ~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~-~l~~g~~d---g~i~iwd~~~~~~~~~~  353 (391)
                      |+.  ...|++++.+|++.|||++..+.+..+..+.   .+..++|+|+.. .|++++.|   -.|.+||+|...  ..+
T Consensus       169 WNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~as--sP~  246 (1049)
T KOG0307|consen  169 WNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFAS--SPL  246 (1049)
T ss_pred             cchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccC--Cch
Confidence            993  3458899999999999999988877776655   378899999854 56666654   369999998644  245


Q ss_pred             EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         354 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       354 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..+.+|...|.++.|++.|..+|+|++.|+.|.+|+.
T Consensus       247 k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~  283 (1049)
T KOG0307|consen  247 KILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNP  283 (1049)
T ss_pred             hhhcccccceeeeccCCCCchhhhcccCCCCeeEecC
Confidence            6778999999999999988899999999999999985

>KOG0649|consensus

Probab=99.86  E-value=1.5e-19  Score=138.51  Aligned_cols=222  Identities=16%  Similarity=0.238  Sum_probs=164.2

Q ss_pred             ecCCEEEEEECCCeEEEEcCCC-----------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         124 FHNDWILTGCYDHSVHIWTRRG-----------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       124 ~~~~~l~t~~~dg~i~iwd~~~-----------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      .++++|++|..+|.|.+..++.           ..+....+|.++|+.++|.     ..+|++|+ ||.|+-|.++....
T Consensus        20 p~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~-----d~~Lls~g-dG~V~gw~W~E~~e   93 (325)
T KOG0649|consen   20 PSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH-----DDFLLSGG-DGLVYGWEWNEEEE   93 (325)
T ss_pred             CcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee-----hhheeecc-CceEEEeeehhhhh
Confidence            3477999999999999997631           2344567999999999993     44677666 59999999864332


Q ss_pred             ce--eEEEEE--ecC-----CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         193 SI--ECIHVC--RGH-----ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       193 ~~--~~~~~~--~~~-----~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      ..  +.+...  .-|     -..|++|...|..+-++.++.|+.++.||+++++                          
T Consensus        94 s~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~--------------------------  147 (325)
T KOG0649|consen   94 SLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGR--------------------------  147 (325)
T ss_pred             hccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCE--------------------------
Confidence            11  111111  112     2468999999988888888899999999998844                          


Q ss_pred             CCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECC-----------eeeEEEEECCCCCEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGN-----------KSFFDVHYSPLSKLVI  331 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~i~~~~~~p~~~~l~  331 (391)
                         ....+.+|++.|.++.-- ..+.+++|+.||++|+||+++++.+..+...           ..|.+++.  +..+++
T Consensus       148 ---i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlv  222 (325)
T KOG0649|consen  148 ---IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLV  222 (325)
T ss_pred             ---EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEE
Confidence               677899999999999984 7788999999999999999999998887532           13455554  467888


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+ ...+.+|.++..+   +...+. -..+|..+.|..   ..+++++..+.|.-|.+
T Consensus       223 CGg-Gp~lslwhLrsse---~t~vfp-ipa~v~~v~F~~---d~vl~~G~g~~v~~~~l  273 (325)
T KOG0649|consen  223 CGG-GPKLSLWHLRSSE---STCVFP-IPARVHLVDFVD---DCVLIGGEGNHVQSYTL  273 (325)
T ss_pred             ecC-CCceeEEeccCCC---ceEEEe-cccceeEeeeec---ceEEEeccccceeeeee
Confidence            876 5679999999876   333332 344578888854   46788887778877764

>KOG1587|consensus

Probab=99.86  E-value=2.3e-19  Score=160.08  Aligned_cols=270  Identities=19%  Similarity=0.283  Sum_probs=189.6

Q ss_pred             eEEEEEEeccCCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCCceE-------EeccCCCCCeeEEEEE
Q psy2107          95 VIDVEYLESTPTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRGEHK-------LNIPGHGGPVKGVAWL  164 (391)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~-------~~~~~~~~~v~~l~~~  164 (391)
                      .+-+|.....  ..|...+.-...|+|+.|+   +.+++.|+++|.|.+||++....       .....|..+++.+.|.
T Consensus       223 ~~~vW~~~~p--~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~  300 (555)
T KOG1587|consen  223 VLLVWSLKNP--NTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWL  300 (555)
T ss_pred             eEEEEecCCC--CCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEe
Confidence            4566655443  2344455567789999997   77999999999999999943222       1234789999999998


Q ss_pred             ecCCCCeEEEEEeCCCcEEEEeecCCCCce--eEEEEEe------cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q psy2107         165 YNDGKDAAFISVSTDQTAMIWEWKVESNSI--ECIHVCR------GHERGLETVTVSE-SRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~------~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .+..+ .-|++++.||.|..|+++.-....  .+.....      .....+++++|.+ +...++.|+.+|.|.--+-..
T Consensus       301 ~~~~~-~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g  379 (555)
T KOG1587|consen  301 QNEHN-TEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKG  379 (555)
T ss_pred             ccCCC-CceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccC
Confidence            85433 679999999999999865322111  0111111      1234789999988 456799999999987633322


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecc-cCceeEEEE
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE-LGGMKSEIV  313 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~-~~~~~~~~~  313 (391)
                      .....                     ....+.......|.++|.++.++|-.. ++..+.|.+++||... ...++..+.
T Consensus       380 ~~~~~---------------------~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~  438 (555)
T KOG1587|consen  380 YTPAP---------------------EVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLD  438 (555)
T ss_pred             Ccccc---------------------cccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhhh
Confidence            11100                     011234556667899999999997543 4444449999999987 666666665


Q ss_pred             CCe-eeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         314 GNK-SFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       314 ~~~-~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+. .+++++|||... .++++..||.|.+||+......+ +....-+....+.+.|++ .+.+|+.|...|.+.+|+|
T Consensus       439 ~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P-v~s~~~~~~~l~~~~~s~-~g~~lavGd~~G~~~~~~l  515 (555)
T KOG1587|consen  439 SSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP-VLSQKVCSPALTRVRWSP-NGKLLAVGDANGTTHILKL  515 (555)
T ss_pred             hccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCC-cccccccccccceeecCC-CCcEEEEecCCCcEEEEEc
Confidence            554 599999999854 77788889999999997654333 333333466678888888 7789999999999999987

>KOG1445|consensus

Probab=99.86  E-value=2.8e-20  Score=160.77  Aligned_cols=111  Identities=18%  Similarity=0.439  Sum_probs=93.1

Q ss_pred             cccEEEec--cCCeEEEEECCCeEEEEecccCc-------eeEEEECCe-eeEEEEECCC-CCEEEEeeCCCcEEEEcCC
Q psy2107         277 AISAVQWT--AVDEIITSSWDHTLKIWDAELGG-------MKSEIVGNK-SFFDVHYSPL-SKLVITASADKQIRLYDPK  345 (391)
Q Consensus       277 ~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~-~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~  345 (391)
                      .|+.+.|.  ++.+|+.++.||.|++|.+..+.       +...+..|. .|+++.|+|- ...|++++.|.+|++||++
T Consensus       629 ~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~  708 (1012)
T KOG1445|consen  629 LVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLA  708 (1012)
T ss_pred             eeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehh
Confidence            35778888  45679999999999999987543       334455554 8999999996 5689999999999999999


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..   ....+.+|.+.|.+++|+| +++.++|.+.||+|+||+-|
T Consensus       709 ~~~---~~~~l~gHtdqIf~~AWSp-dGr~~AtVcKDg~~rVy~Pr  750 (1012)
T KOG1445|consen  709 NAK---LYSRLVGHTDQIFGIAWSP-DGRRIATVCKDGTLRVYEPR  750 (1012)
T ss_pred             hhh---hhheeccCcCceeEEEECC-CCcceeeeecCceEEEeCCC
Confidence            877   6678899999999999999 66789999999999999754

>KOG1009|consensus

Probab=99.86  E-value=9e-20  Score=149.47  Aligned_cols=120  Identities=18%  Similarity=0.309  Sum_probs=98.9

Q ss_pred             CCcEEEEEec---CCEEEEEECCCeEEEEcCC----Cc------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         116 DDWVSAIDFH---NDWILTGCYDHSVHIWTRR----GE------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       116 ~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~----~~------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      ..+|..+.|.   .+.++||+.|..|+||-+.    ++      -...+..|..+|+++.|   +++|.+||+|+.+|.|
T Consensus        13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf---~p~gelLASg~D~g~v   89 (434)
T KOG1009|consen   13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRF---SPDGELLASGGDGGEV   89 (434)
T ss_pred             CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEE---cCCcCeeeecCCCceE
Confidence            3478888886   3389999999999999761    11      22356789999999999   7789999999999999


Q ss_pred             EEEeec--------C----CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         183 MIWEWK--------V----ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       183 ~iwd~~--------~----~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                      .+|...        .    ....+.....+.+|...|..++|+|+++++++|+.|..+++||+..+..
T Consensus        90 ~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l  157 (434)
T KOG1009|consen   90 FLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQL  157 (434)
T ss_pred             EEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEecccee
Confidence            999743        1    0223566778889999999999999999999999999999999987553

>KOG1063|consensus

Probab=99.86  E-value=1.1e-19  Score=158.55  Aligned_cols=325  Identities=16%  Similarity=0.207  Sum_probs=211.6

Q ss_pred             HHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCE
Q psy2107          49 LINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDW  128 (391)
Q Consensus        49 ~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~  128 (391)
                      ++...+..+....    ....+++..++.+     ++  ....+++.+.+|-.+...-.....+.+|...+.|+.-....
T Consensus        45 ~i~t~l~GH~a~V----nC~~~l~~s~~~a-----~~--vsG~sD~~v~lW~l~~~~~~~i~~~~g~~~~~~cv~a~~~~  113 (764)
T KOG1063|consen   45 LIVTTLDGHVARV----NCVHWLPTSEIVA-----EM--VSGDSDGRVILWKLRDEYLIKIYTIQGHCKECVCVVARSSV  113 (764)
T ss_pred             eeEEeccCCccce----EEEEEcccccccc-----eE--EEccCCCcEEEEEEeehheEEEEeecCcceeEEEEEeeeeE
Confidence            4566666655444    3356676665221     11  12357888888887744333445555666666665544444


Q ss_pred             EEEEECCCeEEEEcCCCceEE-----eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         129 ILTGCYDHSVHIWTRRGEHKL-----NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       129 l~t~~~dg~i~iwd~~~~~~~-----~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      ..+.+.|+++.+||.+...+.     .+.....--.|++++| .++.-+++.|+.+..|.++.-  .......+..+.||
T Consensus       114 ~~~~~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~-~~~~~lla~Ggs~~~v~~~s~--~~d~f~~v~el~GH  190 (764)
T KOG1063|consen  114 MTCKAADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALK-NNKTFLLACGGSKFVVDLYSS--SADSFARVAELEGH  190 (764)
T ss_pred             EEeeccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhc-cCCcEEEEecCcceEEEEecc--CCcceeEEEEeecc
Confidence            444579999999999554422     1221222335677766 344446777777888888863  34567888999999


Q ss_pred             CCCeEEEEEcCCC---CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc-c-CCCCCceeeecCccCcc
Q psy2107         204 ERGLETVTVSESR---QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-S-ASSRTPLITLKGHKEAI  278 (391)
Q Consensus       204 ~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~v  278 (391)
                      .+.|.+++|...+   -+|+++|.|..|+||.+.-......................... . .........+.+|...|
T Consensus       191 ~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV  270 (764)
T KOG1063|consen  191 TDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWV  270 (764)
T ss_pred             chhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccce
Confidence            9999999998744   47899999999999998654422211000000000000000000 0 00000112345999999


Q ss_pred             cEEEeccCC-eEEEEECCCeEEEEecccC--ceeEEEE-----CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107         279 SAVQWTAVD-EIITSSWDHTLKIWDAELG--GMKSEIV-----GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG  349 (391)
Q Consensus       279 ~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~-----~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~  349 (391)
                      .++.|+|.+ .|++++.|.++.+|.-.+.  --+....     +. .......|+|+++.+++-+.-|..++|.......
T Consensus       271 ~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~  350 (764)
T KOG1063|consen  271 YSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTF  350 (764)
T ss_pred             EEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccc
Confidence            999999887 5999999999999976543  2222222     11 2588999999999999999999999998444333


Q ss_pred             ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ........||.+.|++++|+| .+.+|+|.|.|.+-|++
T Consensus       351 w~~~~~iSGH~~~V~dv~W~p-sGeflLsvs~DQTTRlF  388 (764)
T KOG1063|consen  351 WTQEPVISGHVDGVKDVDWDP-SGEFLLSVSLDQTTRLF  388 (764)
T ss_pred             eeeccccccccccceeeeecC-CCCEEEEeccccceeee
Confidence            345556789999999999999 56689999999999987

>KOG1007|consensus

Probab=99.85  E-value=5.8e-20  Score=144.16  Aligned_cols=229  Identities=21%  Similarity=0.329  Sum_probs=167.1

Q ss_pred             CCCeEEEEcCC--Cce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCC-------CcEEEEeecCCCCc-----eeEE
Q psy2107         134 YDHSVHIWTRR--GEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-------QTAMIWEWKVESNS-----IECI  197 (391)
Q Consensus       134 ~dg~i~iwd~~--~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~~-----~~~~  197 (391)
                      .|+.|.+..++  +..  ...+..|.+.|+.++-+|.  +...|+++..+       -.+.||.+..+-+.     .+++
T Consensus        38 ~dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~--d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v  115 (370)
T KOG1007|consen   38 EDNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPF--DQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECV  115 (370)
T ss_pred             CcceeEEEEecCccchhhhhhhhcCCcceehhhcCCC--CCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHh
Confidence            35677777663  222  2356678899999999776  55677777552       24678987533322     3444


Q ss_pred             EEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107         198 HVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE  276 (391)
Q Consensus       198 ~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (391)
                      ..+. .+-+.|.|+.|.|++..+++-. |..|.+|++..+..+...                       -+...-..+..
T Consensus       116 ~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vae-----------------------v~ss~s~e~~~  171 (370)
T KOG1007|consen  116 ASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAE-----------------------VLSSESAEMRH  171 (370)
T ss_pred             hcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchhee-----------------------ecccccccccc
Confidence            4444 4556899999999999888876 789999999875431100                       00000112455


Q ss_pred             cccEEEecc--CCeEEEEECCCeEEEEecccCceeEEEEC-C-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcce
Q psy2107         277 AISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVG-N-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       277 ~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      ..++-+|+|  ++..+....|++++.||+++.+....+.. | ..+..+.|+|+.+ +|++|++||.|+|||.+..  ..
T Consensus       172 ~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~t--k~  249 (370)
T KOG1007|consen  172 SFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKT--KF  249 (370)
T ss_pred             eecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCC--Cc
Confidence            667778886  45567777899999999998877766653 3 3789999999865 7889999999999998763  34


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++..+.+|..+|+++.|+|...++++|||.|..|.+|..
T Consensus       250 pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca  288 (370)
T KOG1007|consen  250 PVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCA  288 (370)
T ss_pred             cccccCCCceEEEEEEecCccceEEEecCCCceeEEEec
Confidence            677899999999999999988889999999999999853

>KOG2919|consensus

Probab=99.85  E-value=1e-19  Score=144.99  Aligned_cols=220  Identities=15%  Similarity=0.278  Sum_probs=161.9

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEecc--CCCC---CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIP--GHGG---PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV  199 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~--~~~~---~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  199 (391)
                      ..++++.+.+.-|++||. +++....+.  .|..   +..+++|   +++|.+|++|- ...|+++|+...........+
T Consensus       123 t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~F---s~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t  198 (406)
T KOG2919|consen  123 TNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQF---SPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTT  198 (406)
T ss_pred             cceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEe---cCCCCeEeecc-cceEEEeeccCCCCCCcchhh
Confidence            348999999999999998 665555544  2333   3457889   78899988764 678999997433222222111


Q ss_pred             E----ecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         200 C----RGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       200 ~----~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      +    .+..+-|.|++|+|- ...++.|+....+-||.-..                             ..++..+.+|
T Consensus       199 ~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~-----------------------------~~pl~llggh  249 (406)
T KOG2919|consen  199 VTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDG-----------------------------RRPLQLLGGH  249 (406)
T ss_pred             hhcccccccceeeeeeccCCCCcceeeecccceeeeEecCC-----------------------------CCceeeeccc
Confidence            1    234678999999994 45899999988888887654                             5588889999


Q ss_pred             cCcccEEEecc-CCeEEEEEC-CCeEEEEecccC-ceeEEEECCe----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         275 KEAISAVQWTA-VDEIITSSW-DHTLKIWDAELG-GMKSEIVGNK----SFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       275 ~~~v~~~~~~~-~~~l~s~~~-dg~i~iwd~~~~-~~~~~~~~~~----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      .+.|+.+.|.+ ++.|++|+. |..|..||++.. .++..+..+.    .-.-....|++++|++|+.||.|++||+...
T Consensus       250 ~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~  329 (406)
T KOG2919|consen  250 GGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDL  329 (406)
T ss_pred             CCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCC
Confidence            99999999994 556888865 789999999864 3444444332    1223566789999999999999999999873


Q ss_pred             CcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       348 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      ..  ....+..|+..|+.++++| --.++++++.
T Consensus       330 gn--~~sv~~~~sd~vNgvslnP-~mpilatssG  360 (406)
T KOG2919|consen  330 GN--EVSVTGNYSDTVNGVSLNP-IMPILATSSG  360 (406)
T ss_pred             CC--cccccccccccccceecCc-ccceeeeccC
Confidence            32  3456677899999999999 4556777764

>KOG1273|consensus

Probab=99.84  E-value=2.4e-19  Score=142.38  Aligned_cols=193  Identities=12%  Similarity=0.234  Sum_probs=147.8

Q ss_pred             eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      ..|+.|   ++.|.+||.|+.||.|.|||+.    +...-..+.+|..+|++++|+++|+.|++++.|..|.+||+..+.
T Consensus        26 a~~~~F---s~~G~~lAvGc~nG~vvI~D~~----T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs   98 (405)
T KOG1273|consen   26 AECCQF---SRWGDYLAVGCANGRVVIYDFD----TFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS   98 (405)
T ss_pred             cceEEe---ccCcceeeeeccCCcEEEEEcc----ccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC
Confidence            778999   7789999999999999999975    334566788999999999999999999999999999999997643


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEE-C
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIV-G  314 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~-~  314 (391)
                                                   ++..+. ..++|+...|+|..  ..+++-.+..-.+-++..+....--. .
T Consensus        99 -----------------------------~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~  148 (405)
T KOG1273|consen   99 -----------------------------PLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDD  148 (405)
T ss_pred             -----------------------------ceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCC
Confidence                                         444443 46789999999643  45555555555555555422211111 1


Q ss_pred             C----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc-CcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         315 N----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK-EWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       315 ~----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .    ....+..|.+.|+++++|...|.+.++|..+.+   ++..++-.. ..|.++.++. .+..|+.-+.|..||.|+
T Consensus       149 d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e---~vas~rits~~~IK~I~~s~-~g~~liiNtsDRvIR~ye  224 (405)
T KOG1273|consen  149 DGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLE---CVASFRITSVQAIKQIIVSR-KGRFLIINTSDRVIRTYE  224 (405)
T ss_pred             ccccccccccccccCCCCEEEEecCcceEEEEecchhe---eeeeeeechheeeeEEEEec-cCcEEEEecCCceEEEEe
Confidence            1    123344688999999999999999999988765   666655444 6788999988 777899999999999998


Q ss_pred             cC
Q psy2107         390 LR  391 (391)
Q Consensus       390 lr  391 (391)
                      ++
T Consensus       225 ~~  226 (405)
T KOG1273|consen  225 IS  226 (405)
T ss_pred             hh
Confidence            74

>KOG4227|consensus

Probab=99.84  E-value=1.3e-19  Score=147.99  Aligned_cols=297  Identities=14%  Similarity=0.139  Sum_probs=177.2

Q ss_pred             HHHHcCCCccceEEEEEEeccCCC--CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-------ceEEe-c
Q psy2107          84 FLESKGISSENVIDVEYLESTPTP--SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-------EHKLN-I  151 (391)
Q Consensus        84 ~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-------~~~~~-~  151 (391)
                      ||.+.++.....+.-.+.+....+  ....+.+|.+.|+++.|+  +.+|++|+.|..+++|++..       +.+.. -
T Consensus        22 FL~QR~i~~~~~~~k~F~~~~~~R~~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~  101 (609)
T KOG4227|consen   22 FLCQREIGSVKSVVKTFRPDFQHRPFCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVME  101 (609)
T ss_pred             eeeecccCCChhhhhhhchhhhhcchhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceecc
Confidence            344444444444433333322221  124567899999999998  77999999999999998732       22222 2


Q ss_pred             cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107         152 PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR--GHERGLETVTVSESRQQFATGGWDCLLK  229 (391)
Q Consensus       152 ~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~sg~~dg~i~  229 (391)
                      ..|...|.|++|   +..+.++.+|..+++|...|++.  .  +.+..+.  ...+.|..+..+|-.+.|++.+.+|.|.
T Consensus       102 ~~H~SNIF~L~F---~~~N~~~~SG~~~~~VI~HDiEt--~--qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~  174 (609)
T KOG4227|consen  102 HPHRSNIFSLEF---DLENRFLYSGERWGTVIKHDIET--K--QSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVS  174 (609)
T ss_pred             CccccceEEEEE---ccCCeeEecCCCcceeEeeeccc--c--eeeeeecccCcccceeecccCCCCceEEEEecCceEE
Confidence            246689999999   77788999999999999999652  2  2333332  2345999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCC-C--CCCcccc-----ccccccccC-------CCCCceeee------cCc---cCcccEEEecc
Q psy2107         230 IWSADISKERGDPSEN-G--DEGTTSK-----KRKKEYSSA-------SSRTPLITL------KGH---KEAISAVQWTA  285 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~-~--~~~~~~~-----~~~~~~~~~-------~~~~~~~~~------~~~---~~~v~~~~~~~  285 (391)
                      +||.+....-..+... .  .......     .........       ..+.+...+      .+-   ......+.|++
T Consensus       175 ~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~  254 (609)
T KOG4227|consen  175 FIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSP  254 (609)
T ss_pred             EEeccCCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCC
Confidence            9999875422111000 0  0000000     000000000       000000000      000   01113344443


Q ss_pred             CCe-EEEEECCCeEEEEecccCce-eEEEECC-------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-------
Q psy2107         286 VDE-IITSSWDHTLKIWDAELGGM-KSEIVGN-------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-------  349 (391)
Q Consensus       286 ~~~-l~s~~~dg~i~iwd~~~~~~-~~~~~~~-------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-------  349 (391)
                      ++. |++--....-.+||+.+..+ +..+.+.       ..+.+++|..+. .+++|+.+-.|++|.+.....       
T Consensus       255 ~G~Q~msiRR~~~P~~~D~~S~R~~V~k~D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~I  333 (609)
T KOG4227|consen  255 SGNQFMSIRRGKCPLYFDFISQRCFVLKSDHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQI  333 (609)
T ss_pred             CCCeehhhhccCCCEEeeeecccceeEeccCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCcccc
Confidence            332 33333333333445444222 2222211       135567776543 489999999999998753210       


Q ss_pred             -------------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         350 -------------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       350 -------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                                   ......+++|.+.++.+.|+| ..++|++.|-...++||.
T Consensus       334 G~~~~~~~~~~~i~~~~~VLrGHRSv~NQVRF~~-H~~~l~SSGVE~~~KlWS  385 (609)
T KOG4227|consen  334 GHDEEEMPSEIFIEKELTVLRGHRSVPNQVRFSQ-HNNLLVSSGVENSFKLWS  385 (609)
T ss_pred             CcchhhCchhheecceeEEEecccccccceeecC-CcceEeccchhhheeccc
Confidence                         012357889999999999999 678999999999999995

>KOG0303|consensus

Probab=99.84  E-value=6.1e-19  Score=144.17  Aligned_cols=223  Identities=18%  Similarity=0.240  Sum_probs=164.8

Q ss_pred             CcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcC-CC-------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         110 LDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTR-RG-------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~-~~-------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      -...||+++|..++|+   ...+|+||.|.+|.||.+ ++       +.+..+.+|...|--++|+|.  ..+.|++++.
T Consensus        75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPt--A~NVLlsag~  152 (472)
T KOG0303|consen   75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPT--APNVLLSAGS  152 (472)
T ss_pred             CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeeccc--chhhHhhccC
Confidence            3456899999999998   559999999999999987 22       446678899999999999886  4568999999


Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |.+|.+|++.    +.+.+..+. |...|.++.|+.+|.+|++.+.|+.|+|||.++++.                    
T Consensus       153 Dn~v~iWnv~----tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~--------------------  207 (472)
T KOG0303|consen  153 DNTVSIWNVG----TGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV--------------------  207 (472)
T ss_pred             CceEEEEecc----CCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE--------------------
Confidence            9999999965    334455555 999999999999999999999999999999988554                    


Q ss_pred             cccCCCCCceeeecCccCc-ccEEEeccCCeEEEEE----CCCeEEEEecccC---ceeEEEECCeeeEEEEECCCCCEE
Q psy2107         259 YSSASSRTPLITLKGHKEA-ISAVQWTAVDEIITSS----WDHTLKIWDAELG---GMKSEIVGNKSFFDVHYSPLSKLV  330 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~l~s~~----~dg~i~iwd~~~~---~~~~~~~~~~~i~~~~~~p~~~~l  330 (391)
                               +..-.+|.+. -..+.|..++.+++.+    .+..+.+||..+-   -...++.....|.---|.|+.+++
T Consensus       208 ---------v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~iv  278 (472)
T KOG0303|consen  208 ---------VSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIV  278 (472)
T ss_pred             ---------eeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEE
Confidence                     3333455432 3345555455566654    4678999986643   345566666677777788887766


Q ss_pred             E-EeeCCCcEEEEcCCCCCcceEEEEecc--ccCcEEEEEECC
Q psy2107         331 I-TASADKQIRLYDPKVKEGAIVKSTFSS--HKEWVQSVRWSP  370 (391)
Q Consensus       331 ~-~g~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~~~~~~  370 (391)
                      . +|-.|+.|+.|.+....  ..+..+..  ...+-..+.|-|
T Consensus       279 Yl~GKGD~~IRYyEit~d~--P~~hyln~f~S~epQRG~g~mP  319 (472)
T KOG0303|consen  279 YLCGKGDSSIRYFEITNEP--PFVHYLNTFSSKEPQRGMGFMP  319 (472)
T ss_pred             EEEecCCcceEEEEecCCC--ceeEEecccccCCccccccccc
Confidence            5 56679999999986543  12222221  234556666666

>KOG1538|consensus

Probab=99.84  E-value=4.2e-19  Score=154.48  Aligned_cols=266  Identities=18%  Similarity=0.300  Sum_probs=191.6

Q ss_pred             eeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          67 QFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        67 ~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ..+|-|||. ++..            .+..+-+.+...  .....++.+|.+.|.|++|+  |+++|+|+.|..|.+|+.
T Consensus        17 d~afkPDGsqL~lA------------Ag~rlliyD~nd--G~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~   82 (1081)
T KOG1538|consen   17 DIAFKPDGTQLILA------------AGSRLLVYDTSD--GTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTS   82 (1081)
T ss_pred             eeEECCCCceEEEe------------cCCEEEEEeCCC--cccccccccccceEEEEEEccCCceeccCCCceeEEEecc
Confidence            357889984 3322            344444444322  23356678999999999998  889999999999999997


Q ss_pred             CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      +-+-+..+ .|+..|.|+.|   +|-...|++++-. ..-+|...  .   +.+...+ ....+.+++|..+|++++.|-
T Consensus        83 klEG~LkY-SH~D~IQCMsF---NP~~h~LasCsLs-dFglWS~~--q---K~V~K~k-ss~R~~~CsWtnDGqylalG~  151 (1081)
T KOG1538|consen   83 KLEGILKY-SHNDAIQCMSF---NPITHQLASCSLS-DFGLWSPE--Q---KSVSKHK-SSSRIICCSWTNDGQYLALGM  151 (1081)
T ss_pred             cccceeee-ccCCeeeEeec---CchHHHhhhcchh-hccccChh--h---hhHHhhh-hheeEEEeeecCCCcEEEEec
Confidence            55444444 59999999999   5556678888754 35678732  1   1111111 245788999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC------CeEEEEECCCe
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV------DEIITSSWDHT  297 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~l~s~~~dg~  297 (391)
                      .+|+|.+-+-.. +.                          ...+..-.+..++|.+++|+|.      ..+++.....+
T Consensus       152 ~nGTIsiRNk~g-Ee--------------------------k~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qT  204 (1081)
T KOG1538|consen  152 FNGTISIRNKNG-EE--------------------------KVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQT  204 (1081)
T ss_pred             cCceEEeecCCC-Cc--------------------------ceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccce
Confidence            999999874321 11                          1122233357789999999953      23777788888


Q ss_pred             EEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         298 LKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       298 i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      +.+|.+. |+.+. .....-...|+.+.++|.+++.|+.|+.+++|--.   + ..+.++.....+|+.++..| +++.+
T Consensus       205 LSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~---G-vrLGTvg~~D~WIWtV~~~P-NsQ~v  278 (1081)
T KOG1538|consen  205 LSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRD---G-VRLGTVGEQDSWIWTVQAKP-NSQYV  278 (1081)
T ss_pred             eEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEeec---C-eEEeeccccceeEEEEEEcc-CCceE
Confidence            8888875 33332 33334466789999999999999999999999632   2 24556666788999999999 77889


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      +.|+.||+|-.|++
T Consensus       279 ~~GCqDGTiACyNl  292 (1081)
T KOG1538|consen  279 VVGCQDGTIACYNL  292 (1081)
T ss_pred             EEEEccCeeehhhh
Confidence            99999999988875

>KOG1034|consensus

Probab=99.83  E-value=1.9e-19  Score=143.69  Aligned_cols=241  Identities=17%  Similarity=0.329  Sum_probs=175.6

Q ss_pred             CCCCcEEEEEec-------CCEEEEEECCCeEEEEcCCC----ceEEec--cCCCCCeeEEEEEecCCC-CeEEEEEeCC
Q psy2107         114 LHDDWVSAIDFH-------NDWILTGCYDHSVHIWTRRG----EHKLNI--PGHGGPVKGVAWLYNDGK-DAAFISVSTD  179 (391)
Q Consensus       114 ~h~~~V~~~~~~-------~~~l~t~~~dg~i~iwd~~~----~~~~~~--~~~~~~v~~l~~~~~~~~-~~~l~s~~~d  179 (391)
                      .|..+|..++|+       ...+++++. ..+.+|...+    ..+..+  ..|......++|.....+ .-++|+|+.-
T Consensus        36 d~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~  114 (385)
T KOG1034|consen   36 DHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYL  114 (385)
T ss_pred             cCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeecce
Confidence            488899999997       346666665 4788887733    222322  247788899999887664 5589999999


Q ss_pred             CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |.|+|.|+.    ..++...+.+|...|..+.++|.. ++++++|.|..|++|++++..                     
T Consensus       115 GvIrVid~~----~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~---------------------  169 (385)
T KOG1034|consen  115 GVIRVIDVV----SGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDV---------------------  169 (385)
T ss_pred             eEEEEEecc----hhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCe---------------------
Confidence            999999965    446778889999999999999965 789999999999999998744                     


Q ss_pred             cccCCCCCceee---ecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEE------------------CC-
Q psy2107         259 YSSASSRTPLIT---LKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIV------------------GN-  315 (391)
Q Consensus       259 ~~~~~~~~~~~~---~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~------------------~~-  315 (391)
                              ++..   ..+|...|.++.|+ .+.++++++.|.++++|++...+....+.                  .+ 
T Consensus       170 --------Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~f  241 (385)
T KOG1034|consen  170 --------CVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHF  241 (385)
T ss_pred             --------EEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCcccccc
Confidence                    4443   45899999999999 55679999999999999997432111110                  00 


Q ss_pred             ----------eeeEEEEECCCCCEEEEeeCCCcEEEEcC-CCCC----------cceEEEEeccccCcEEEEEE--CCCC
Q psy2107         316 ----------KSFFDVHYSPLSKLVITASADKQIRLYDP-KVKE----------GAIVKSTFSSHKEWVQSVRW--SPID  372 (391)
Q Consensus       316 ----------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~-~~~~----------~~~~~~~~~~h~~~v~~~~~--~~~~  372 (391)
                                ..|-|+.|-  |+++++-+-++.|..|.+ +..+          .......+.-....|+-+.|  .| -
T Consensus       242 p~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~-~  318 (385)
T KOG1034|consen  242 PDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDP-W  318 (385)
T ss_pred             ccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecH-H
Confidence                      123333443  688999888999999987 2111          11233444444556666655  45 4


Q ss_pred             CCEEEEeeCCCcEEEEecC
Q psy2107         373 PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+||.|...|.|.+|||+
T Consensus       319 ~~~la~gnq~g~v~vwdL~  337 (385)
T KOG1034|consen  319 QKMLALGNQSGKVYVWDLD  337 (385)
T ss_pred             HHHHhhccCCCcEEEEECC
Confidence            5689999999999999985

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.83  E-value=4.6e-17  Score=147.50  Aligned_cols=244  Identities=27%  Similarity=0.491  Sum_probs=189.5

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc--eEEeccCCCC-CeeEEEEEecCCCCe-EEEEEeC-CCcEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE--HKLNIPGHGG-PVKGVAWLYNDGKDA-AFISVST-DQTAM  183 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~--~~~~~~~~~~-~v~~l~~~~~~~~~~-~l~s~~~-dg~v~  183 (391)
                      ....|...|.++.+.  +..++.++.|+.+.+|+....  ....+..+.. .+..+.+. . +++. .++..+. |+.+.
T Consensus        60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~d~~~~  137 (466)
T COG2319          60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALS-S-PDGNSILLASSSLDGTVK  137 (466)
T ss_pred             eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEE-C-CCcceEEeccCCCCccEE
Confidence            345799999999998  668888889999999999555  5666665443 67777763 2 2343 4555444 99999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +|++..   .......+..|...|..++|+|++..+++++. |+.+++|+...                           
T Consensus       138 ~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------  187 (466)
T COG2319         138 LWDLST---PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRT---------------------------  187 (466)
T ss_pred             EEEecC---CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCC---------------------------
Confidence            999652   24667778899999999999999998888886 99999999975                           


Q ss_pred             CCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                        ...+..+.+|...|.+++|++.+. ++++ +.|+.+++||...+.... .+..+.......|+|++.++++++.|+.+
T Consensus       188 --~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  265 (466)
T COG2319         188 --GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTI  265 (466)
T ss_pred             --CceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcE
Confidence              235667777999999999997664 4444 899999999998777777 56665533222799999899999999999


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++|+.+....  ....+.+|...|.++.|+| .+..+++++.|+.+++||++
T Consensus       266 ~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~~~~~~~~  314 (466)
T COG2319         266 RLWDLRSSSS--LLRTLSGHSSSVLSVAFSP-DGKLLASGSSDGTVRLWDLE  314 (466)
T ss_pred             EEeeecCCCc--EEEEEecCCccEEEEEECC-CCCEEEEeeCCCcEEEEEcC
Confidence            9999986553  2223367899999999999 55567779999999999864

>KOG0644|consensus

Probab=99.83  E-value=7.2e-21  Score=169.06  Aligned_cols=237  Identities=22%  Similarity=0.362  Sum_probs=181.4

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+++|.+.|.|+.|+  |.++++|+.|..++||.. +..++..+.+|.+.|+.++.   +.+..++++++.|..|++|.
T Consensus       184 krLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlav---s~~n~~iaaaS~D~vIrvWr  260 (1113)
T KOG0644|consen  184 KRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAV---SSNNTMIAAASNDKVIRVWR  260 (1113)
T ss_pred             HHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhcc---chhhhhhhhcccCceEEEEe
Confidence            3466899999999998  889999999999999998 66778899999999999999   66777899999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +.    ...++..+.+|++.|++++|+|-.    +.+.||++++||.+-......                       ..
T Consensus       261 l~----~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~-----------------------pr  309 (1113)
T KOG0644|consen  261 LP----DGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYV-----------------------PR  309 (1113)
T ss_pred             cC----CCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccC-----------------------CC
Confidence            65    456788899999999999999943    788999999999972111100                       00


Q ss_pred             ceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCC-CCEEEEeeCCCcEEEEcC
Q psy2107         267 PLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL-SKLVITASADKQIRLYDP  344 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~  344 (391)
                      +.. + .....+.++.|.. ...+++++.|+.-..|..........     .+.-+..+.+ ..+.+++-.+..+.+|++
T Consensus       310 p~~-~-~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~~~~-----~lif~t~ssd~~~~~~~ar~~~~~~vwnl  382 (1113)
T KOG0644|consen  310 PLK-F-TEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAWRSN-----LLIFVTRSSDLSSIVVTARNDHRLCVWNL  382 (1113)
T ss_pred             CCC-c-ccccceeeeeccccccccccccCCcccccchhhHhhhhcc-----ceEEEeccccccccceeeeeeeEeeeeec
Confidence            110 0 1124455666663 34589999999988887653221100     0111111112 246667777888999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .++.   +.+.+.+|...+..+.++|.+..+..+++.||...|||+
T Consensus       383 ~~g~---l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi  425 (1113)
T KOG0644|consen  383 YTGQ---LLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDI  425 (1113)
T ss_pred             ccch---hhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeec
Confidence            8876   778888999999999999999999999999999999996

>KOG2055|consensus

Probab=99.82  E-value=2.6e-18  Score=143.22  Aligned_cols=200  Identities=12%  Similarity=0.124  Sum_probs=161.0

Q ss_pred             CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEEC
Q psy2107         155 GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-QFATGGWDCLLKIWSA  233 (391)
Q Consensus       155 ~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~  233 (391)
                      .+.|++|.|   +|...++++|+.||++++|.++-.  ....++.+.-...+|.+.+|.|+|. .+++++....++.||+
T Consensus       213 ~~~I~sv~F---Hp~~plllvaG~d~~lrifqvDGk--~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDl  287 (514)
T KOG2055|consen  213 HGGITSVQF---HPTAPLLLVAGLDGTLRIFQVDGK--VNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDL  287 (514)
T ss_pred             cCCceEEEe---cCCCceEEEecCCCcEEEEEecCc--cChhheeeeeccCccceeeecCCCceEEEecccceEEEEeec
Confidence            478999999   555668999999999999997633  3345666666688999999999998 8999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-cCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEE
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSE  311 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~  311 (391)
                      .+.+..                           .+....++ ...+.....+ .++.|+..+..|.|.+....+++.+.+
T Consensus       288 e~ak~~---------------------------k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s  340 (514)
T KOG2055|consen  288 ETAKVT---------------------------KLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITS  340 (514)
T ss_pred             cccccc---------------------------cccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhe
Confidence            876542                           22223333 2345566666 445688999999999999999999999


Q ss_pred             EECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         312 IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       312 ~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++..+.+..++|+.+++.|++.+.+|.|++||++...   ++..+....+ .=++++.++ ++.+||+|+..|.|.|||.
T Consensus       341 ~KieG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~---~~~rf~D~G~v~gts~~~S~-ng~ylA~GS~~GiVNIYd~  416 (514)
T KOG2055|consen  341 FKIEGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNS---CLHRFVDDGSVHGTSLCISL-NGSYLATGSDSGIVNIYDG  416 (514)
T ss_pred             eeeccEEeeEEEecCCcEEEEEcCCceEEEEecCCcc---eEEEEeecCccceeeeeecC-CCceEEeccCcceEEEecc
Confidence            9999999999999999999999999999999998765   6666653222 236677778 6679999999999999985

>KOG1587|consensus

Probab=99.81  E-value=3.2e-18  Score=152.86  Aligned_cols=235  Identities=13%  Similarity=0.197  Sum_probs=161.0

Q ss_pred             CeEEEEcCCCc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc--eeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS--IECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~l~~  212 (391)
                      +.+.||++... .......-...|.|+.|+|.  +..+++.|+.+|.|.+||++.....  ...-.....|..+++.+.|
T Consensus       222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~--~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW  299 (555)
T KOG1587|consen  222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPF--DPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVW  299 (555)
T ss_pred             ceEEEEecCCCCCceEEEecCCceeEEEeccC--CcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEE
Confidence            47999999443 22222335678999999887  4558999999999999997644431  1222333468899999999


Q ss_pred             cCCCC--EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCe
Q psy2107         213 SESRQ--QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDE  288 (391)
Q Consensus       213 ~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~  288 (391)
                      ..+..  -|++++.||.|+.|+++.-..........                 .......-......++++.|.+  ...
T Consensus       300 ~~~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~-----------------~~~~~~~~~~~~~~~t~~~F~~~~p~~  362 (555)
T KOG1587|consen  300 LQNEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLE-----------------SKKHKGQQSSKAVGATSLKFEPTDPNH  362 (555)
T ss_pred             eccCCCCceEEEecCCcEeeeeccccccchhhcccc-----------------cccccccccccccceeeEeeccCCCce
Confidence            76544  49999999999999886533211000000                 0000000012234678899983  456


Q ss_pred             EEEEECCCeEEEEecc---cCc-----eeEE-EECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         289 IITSSWDHTLKIWDAE---LGG-----MKSE-IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~---~~~-----~~~~-~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      ++.|+.+|.|.--+..   .+.     .... ..+..++.++.++|-+..++..+.|.+++||......  .++..+..+
T Consensus       363 FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~--~Pl~~~~~~  440 (555)
T KOG1587|consen  363 FIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIA--SPLLSLDSS  440 (555)
T ss_pred             EEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCC--Ccchhhhhc
Confidence            9999999998874332   222     1112 2244589999999998766555559999999976322  244566677


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...|++++|||....+|+++..||.+.+|||+
T Consensus       441 ~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl  472 (555)
T KOG1587|consen  441 PDYVTDVAWSPTRPAVFATVDGDGNLDIWDLL  472 (555)
T ss_pred             cceeeeeEEcCcCceEEEEEcCCCceehhhhh
Confidence            78899999999888999999999999999984

>KOG2919|consensus

Probab=99.81  E-value=6.8e-18  Score=134.72  Aligned_cols=242  Identities=16%  Similarity=0.284  Sum_probs=170.8

Q ss_pred             EEEec--CCEEEEEECCCeEEEEcCCC-----c--e------EEec-cCCCCCeeEEEEEec----CCCCeEEEEEeCCC
Q psy2107         121 AIDFH--NDWILTGCYDHSVHIWTRRG-----E--H------KLNI-PGHGGPVKGVAWLYN----DGKDAAFISVSTDQ  180 (391)
Q Consensus       121 ~~~~~--~~~l~t~~~dg~i~iwd~~~-----~--~------~~~~-~~~~~~v~~l~~~~~----~~~~~~l~s~~~dg  180 (391)
                      ...|+  |..|++-+.|..+.+|++..     .  .      ...+ ......|...+|.+.    .|+..++++.+.+.
T Consensus        54 gckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr~~  133 (406)
T KOG2919|consen   54 GCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSRDQ  133 (406)
T ss_pred             cceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccccC
Confidence            44666  67999999999999998721     1  0      0011 134567888888652    45677999999999


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCC---CeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCCCCCCCCCCCCCCccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHER---GLETVTVSESRQQFATGGWDCLLKIWSA-DISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~sg~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      -|.+||.-  ++..++-.....|..   ...+++|+|+|..|++|. ...|+++|+ +.++....               
T Consensus       134 PIh~wdaf--tG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~v---------------  195 (406)
T KOG2919|consen  134 PIHLWDAF--TGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPV---------------  195 (406)
T ss_pred             ceeeeecc--ccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcc---------------
Confidence            99999943  333333222222333   456899999999998775 568999999 44332110               


Q ss_pred             cccccCCCCCceee-ecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEE
Q psy2107         257 KEYSSASSRTPLIT-LKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVIT  332 (391)
Q Consensus       257 ~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~  332 (391)
                              ...+.. -.+..+-+.+++|+|..  .++.++...++-||.-..+.++..+-++. .|+.+.|.++|+.|.+
T Consensus       196 --------y~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfs  267 (406)
T KOG2919|consen  196 --------YTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFS  267 (406)
T ss_pred             --------hhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecc
Confidence                    000111 22346778899999644  58899999999999888888888887766 8999999999999999


Q ss_pred             eeC-CCcEEEEcCCCCCcceEEEEeccccC-cEEEEEE--CCCCCCEEEEeeCCCcEEEEecC
Q psy2107         333 ASA-DKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRW--SPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       333 g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~--~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |.. |-.|..||++....  ++..+..|.. .-..|-|  .| .+++|++|+.||.|++||++
T Consensus       268 GaRk~dkIl~WDiR~~~~--pv~~L~rhv~~TNQRI~FDld~-~~~~LasG~tdG~V~vwdlk  327 (406)
T KOG2919|consen  268 GARKDDKILCWDIRYSRD--PVYALERHVGDTNQRILFDLDP-KGEILASGDTDGSVRVWDLK  327 (406)
T ss_pred             cccCCCeEEEEeehhccc--hhhhhhhhccCccceEEEecCC-CCceeeccCCCccEEEEecC
Confidence            874 67899999987432  3445666654 3333444  56 56799999999999999985

>KOG2394|consensus

Probab=99.80  E-value=7.5e-18  Score=143.12  Aligned_cols=199  Identities=15%  Similarity=0.154  Sum_probs=140.0

Q ss_pred             cCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE--ecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCC
Q psy2107         166 NDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC--RGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDP  242 (391)
Q Consensus       166 ~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~  242 (391)
                      ..+.+.-++.|-.-|.|.+.|...  .....+...  .-.+..|+|+.|-|.+ ..++.+-.+|.+++||.........+
T Consensus       181 a~~~g~dllIGf~tGqvq~idp~~--~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p  258 (636)
T KOG2394|consen  181 ATPKGLDLLIGFTTGQVQLIDPIN--FEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAP  258 (636)
T ss_pred             cCCCCcceEEeeccCceEEecchh--hHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCC
Confidence            345666788899999999988432  111111111  1124689999999854 56777788999999987432211111


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEEC-CeeeEE
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVG-NKSFFD  320 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~i~~  320 (391)
                      .. ...................+.++..+.-.++.|...+|++++ +|++.+.||.+||||..+.+++..++. .....|
T Consensus       259 ~~-~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLC  337 (636)
T KOG2394|consen  259 SY-QALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLC  337 (636)
T ss_pred             cc-cccCCCCeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEE
Confidence            00 001111111222222333446777776667799999999665 499999999999999998877766553 358999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      ++|+|||+||++|++|.-|.||.+...+   ++..-.+|+++|+.++|.|
T Consensus       338 vcWSPDGKyIvtGGEDDLVtVwSf~erR---VVARGqGHkSWVs~VaFDp  384 (636)
T KOG2394|consen  338 VCWSPDGKYIVTGGEDDLVTVWSFEERR---VVARGQGHKSWVSVVAFDP  384 (636)
T ss_pred             EEEcCCccEEEecCCcceEEEEEeccce---EEEeccccccceeeEeecc
Confidence            9999999999999999999999987666   8889999999999999983

>KOG0649|consensus

Probab=99.80  E-value=2.9e-16  Score=120.72  Aligned_cols=240  Identities=15%  Similarity=0.211  Sum_probs=166.9

Q ss_pred             cCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCc-------eEE--eccCCC-----CCeeEEEEEecCCCCeEEEEEeC
Q psy2107         113 ILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE-------HKL--NIPGHG-----GPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       113 ~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~-------~~~--~~~~~~-----~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      ..|.++|..++|..++|++|+. |.|+=|.....       .+.  ..+.|.     -.|+++..   .|..+-++.++.
T Consensus        59 qahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~l---dP~enSi~~AgG  134 (325)
T KOG0649|consen   59 QAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWL---DPSENSILFAGG  134 (325)
T ss_pred             cccCCCeeeeeeehhheeeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEe---ccCCCcEEEecC
Confidence            5799999999999888888876 99999976211       111  112222     35778887   444445566668


Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |+.+.-||++    .++..+.+++|++.|.++.-......+++|++||++++||.++.+.......              
T Consensus       135 D~~~y~~dlE----~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~--------------  196 (325)
T KOG0649|consen  135 DGVIYQVDLE----DGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP--------------  196 (325)
T ss_pred             CeEEEEEEec----CCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecc--------------
Confidence            9999999976    5577889999999999999855555799999999999999998765332111              


Q ss_pred             cccCCCCCceeeecCc-cCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC
Q psy2107         259 YSSASSRTPLITLKGH-KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg  337 (391)
                            .+....+..| ...|.+++-+.  -.+.|+....+.+|.++..++...+..+.++..+.|.  .+.+++++..+
T Consensus       197 ------yk~~~~lRp~~g~wigala~~e--dWlvCGgGp~lslwhLrsse~t~vfpipa~v~~v~F~--~d~vl~~G~g~  266 (325)
T KOG0649|consen  197 ------YKNPNLLRPDWGKWIGALAVNE--DWLVCGGGPKLSLWHLRSSESTCVFPIPARVHLVDFV--DDCVLIGGEGN  266 (325)
T ss_pred             ------ccChhhcCcccCceeEEEeccC--ceEEecCCCceeEEeccCCCceEEEecccceeEeeee--cceEEEecccc
Confidence                  0011112222 34566666442  3445566778999999999999999999999999986  45777788788


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .|.-|.+.. .   +...........++..|+..--+++..++..+.+.|+
T Consensus       267 ~v~~~~l~G-v---l~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~  313 (325)
T KOG0649|consen  267 HVQSYTLNG-V---LQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL  313 (325)
T ss_pred             ceeeeeecc-E---EEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence            899998642 1   3334444444567777765333456666777777665

>KOG0650|consensus

Probab=99.80  E-value=1.2e-17  Score=143.68  Aligned_cols=258  Identities=16%  Similarity=0.223  Sum_probs=186.1

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CC-EEEEEECCCeEEEEcC-CC--------------------
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--ND-WILTGCYDHSVHIWTR-RG--------------------  145 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~-~~--------------------  145 (391)
                      .+.++++++|-+....   ......-.+.|.||+|+  ++ .+++....+.+.|-+. -+                    
T Consensus       418 GsdDGtvriWEi~TgR---cvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~  494 (733)
T KOG0650|consen  418 GSDDGTVRIWEIATGR---CVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESE  494 (733)
T ss_pred             cCCCCcEEEEEeecce---EEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcCCCccC
Confidence            4678999999775332   12223356689999998  22 3333333333555442 01                    


Q ss_pred             -----------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCC
Q psy2107         146 -----------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHER  205 (391)
Q Consensus       146 -----------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~  205 (391)
                                       .-+.....|...|..+.|   +..|.+|++...+   ..|.|.++...    .....|....+
T Consensus       495 p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtW---HrkGDYlatV~~~~~~~~VliHQLSK~----~sQ~PF~kskG  567 (733)
T KOG0650|consen  495 PDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTW---HRKGDYLATVMPDSGNKSVLIHQLSKR----KSQSPFRKSKG  567 (733)
T ss_pred             CcccceeechhhhhhhccceEEEEecCCccceeee---ecCCceEEEeccCCCcceEEEEecccc----cccCchhhcCC
Confidence                             001122357889999999   7789999988764   46788886522    22234444567


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      .|.++.|+|...+|++++. ..|++||+..                             ...+..+......|..++.+|
T Consensus       568 ~vq~v~FHPs~p~lfVaTq-~~vRiYdL~k-----------------------------qelvKkL~tg~kwiS~msihp  617 (733)
T KOG0650|consen  568 LVQRVKFHPSKPYLFVATQ-RSVRIYDLSK-----------------------------QELVKKLLTGSKWISSMSIHP  617 (733)
T ss_pred             ceeEEEecCCCceEEEEec-cceEEEehhH-----------------------------HHHHHHHhcCCeeeeeeeecC
Confidence            8999999999998988876 4899999964                             234455555677889999996


Q ss_pred             C-CeEEEEECCCeEEEEecccC-ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCC------CCcceEEEEe
Q psy2107         286 V-DEIITSSWDHTLKIWDAELG-GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKV------KEGAIVKSTF  356 (391)
Q Consensus       286 ~-~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~------~~~~~~~~~~  356 (391)
                      . ..|+.++.|+.+..+|+.-+ ++.+++..|. .+++++|++.-.++++|+.||++.||.-..      .....++..+
T Consensus       618 ~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L  697 (733)
T KOG0650|consen  618 NGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRL  697 (733)
T ss_pred             CCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeec
Confidence            4 56999999999999999854 4566666665 899999999999999999999999985332      2223456788


Q ss_pred             ccccCc----EEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         357 SSHKEW----VQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       357 ~~h~~~----v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .+|...    |.++.|+| ..-+|+|++.||+|++|
T Consensus       698 ~gH~~~~~~gVLd~~wHP-~qpWLfsAGAd~tirlf  732 (733)
T KOG0650|consen  698 RGHEKTNDLGVLDTIWHP-RQPWLFSAGADGTIRLF  732 (733)
T ss_pred             cCceeecccceEeecccC-CCceEEecCCCceEEee
Confidence            899776    89999999 56689999999999998

>KOG1523|consensus

Probab=99.79  E-value=3.2e-17  Score=130.75  Aligned_cols=234  Identities=20%  Similarity=0.295  Sum_probs=176.6

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCC----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRG----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      ..+|+|.+|+  ...+|.+.....|.||...+    +...++..|...|+.|.|   ++..+.|++|+.|..-++|... 
T Consensus        10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdW---ap~snrIvtcs~drnayVw~~~-   85 (361)
T KOG1523|consen   10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDW---APKSNRIVTCSHDRNAYVWTQP-   85 (361)
T ss_pred             cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEee---cCCCCceeEccCCCCccccccC-
Confidence            3589999998  45899999999999998843    456688899999999999   5667789999999999999852 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      ....+++...+..+....+++.|+|.++.|++|+.-..|.+|-++....-                         .-..+
T Consensus        86 ~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdW-------------------------WVsKh  140 (361)
T KOG1523|consen   86 SGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDW-------------------------WVSKH  140 (361)
T ss_pred             CCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccce-------------------------ehhhh
Confidence            46678888888889999999999999999999999999999988652210                         00111


Q ss_pred             eecCccCcccEEEeccCCe-EEEEECCCeEEEEecc------------------cCceeEEE-ECCeeeEEEEECCCCCE
Q psy2107         270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE------------------LGGMKSEI-VGNKSFFDVHYSPLSKL  329 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~------------------~~~~~~~~-~~~~~i~~~~~~p~~~~  329 (391)
                      .-+.+.+.|.++.|+|++. +++|+.|+..|++..-                  -|+++.++ ...+.+..+.|+|+|..
T Consensus       141 ikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~  220 (361)
T KOG1523|consen  141 IKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNR  220 (361)
T ss_pred             hCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCE
Confidence            2234678899999997776 7788899999999742                  12333444 33457999999999999


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      |+-.+.|..+.+-|....... +......+ -+..++.|-. . ..++.++.|
T Consensus       221 lawv~Hds~v~~~da~~p~~~-v~~~~~~~-lP~ls~~~is-e-~~vv~ag~~  269 (361)
T KOG1523|consen  221 LAWVGHDSTVSFVDAAGPSER-VQSVATAQ-LPLLSVSWIS-E-NSVVAAGYD  269 (361)
T ss_pred             eeEecCCCceEEeecCCCchh-ccchhhcc-CCceeeEeec-C-CceeecCCC
Confidence            999999999999987554311 22222222 5677777764 2 235556555

>KOG0771|consensus

Probab=99.79  E-value=5.7e-18  Score=139.88  Aligned_cols=194  Identities=22%  Similarity=0.330  Sum_probs=140.1

Q ss_pred             eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                      .+++|   +.++..+++|+.||++|+|++.    ....+.....|.+.|.++.|+|||++|++-+.| ..+||+.+++..
T Consensus       148 k~vaf---~~~gs~latgg~dg~lRv~~~P----s~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~  219 (398)
T KOG0771|consen  148 KVVAF---NGDGSKLATGGTDGTLRVWEWP----SMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAA  219 (398)
T ss_pred             eEEEE---cCCCCEeeeccccceEEEEecC----cchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCch
Confidence            67888   7789999999999999999965    334455566789999999999999999999999 999999988643


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-----eEEEE-ECCCeEEEEecccC------
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-----EIITS-SWDHTLKIWDAELG------  306 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~s~-~~dg~i~iwd~~~~------  306 (391)
                      .....+                           .........+.|+.++     ++++. ...+.|+.||+...      
T Consensus       220 ~a~~t~---------------------------~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l  272 (398)
T KOG0771|consen  220 LARKTP---------------------------FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFL  272 (398)
T ss_pred             hhhcCC---------------------------cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecccccc
Confidence            221110                           1122234455555222     22222 23455666665432      


Q ss_pred             ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         307 GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       307 ~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      +..+....+..|.+++.+++|++++.|+.||.|.|++....+  .....-+.|...|+.+.|+| +.+.+++.+.|....
T Consensus       273 ~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq--~~~~vk~aH~~~VT~ltF~P-dsr~~~svSs~~~~~  349 (398)
T KOG0771|consen  273 RLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQ--RLQYVKEAHLGFVTGLTFSP-DSRYLASVSSDNEAA  349 (398)
T ss_pred             chhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceee--eeEeehhhheeeeeeEEEcC-CcCcccccccCCcee
Confidence            222333445689999999999999999999999999976643  23344567999999999999 667788888888877


Q ss_pred             EEec
Q psy2107         387 LWDL  390 (391)
Q Consensus       387 iwdl  390 (391)
                      |.-|
T Consensus       350 v~~l  353 (398)
T KOG0771|consen  350 VTKL  353 (398)
T ss_pred             EEEE
Confidence            7543

>KOG0290|consensus

Probab=99.78  E-value=2e-17  Score=130.22  Aligned_cols=217  Identities=17%  Similarity=0.230  Sum_probs=158.7

Q ss_pred             ccceEEEEEEeccCCCCC-------CcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCCc----eEEeccCCCCC
Q psy2107          92 SENVIDVEYLESTPTPSP-------LDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRGE----HKLNIPGHGGP  157 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~-------~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~----~~~~~~~~~~~  157 (391)
                      +...+++|.......+..       -.-..+..+++++.|+   ++++.+++-|-++.|||+...    ...++..|...
T Consensus       119 s~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKE  198 (364)
T KOG0290|consen  119 SSDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKE  198 (364)
T ss_pred             ccCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcc
Confidence            566677776653221111       1122477899999998   789999999999999999443    35578899999


Q ss_pred             eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCC-CcEEEEECCC
Q psy2107         158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWD-CLLKIWSADI  235 (391)
Q Consensus       158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~d-g~i~iwd~~~  235 (391)
                      |..++|..  ...+.||+.+.||.||+||++..... ..+..-.....+...++|+++ -+++|+-..| ..|.+.|++.
T Consensus       199 V~DIaf~~--~s~~~FASvgaDGSvRmFDLR~leHS-TIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~  275 (364)
T KOG0290|consen  199 VYDIAFLK--GSRDVFASVGADGSVRMFDLRSLEHS-TIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRV  275 (364)
T ss_pred             eeEEEecc--CccceEEEecCCCcEEEEEecccccc-eEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecC
Confidence            99999964  24568999999999999998743322 222222222567889999985 4677776554 5699999976


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCc------
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGG------  307 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~------  307 (391)
                      .                            ..++..+.+|++.|..++|.|.  ..+++++.|..+.+||+.+.-      
T Consensus       276 P----------------------------~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~d  327 (364)
T KOG0290|consen  276 P----------------------------CTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGED  327 (364)
T ss_pred             C----------------------------CcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCC
Confidence            3                            3488899999999999999965  459999999999999997532      


Q ss_pred             eeEEEECCeeeEEEEECCC-CCEEEEeeCCCcEE
Q psy2107         308 MKSEIVGNKSFFDVHYSPL-SKLVITASADKQIR  340 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~-~~~l~~g~~dg~i~  340 (391)
                      ++..+...+.|..+.|++. +.+++.+. ++.+.
T Consensus       328 Pilay~a~~EVNqi~Ws~~~~Dwiai~~-~kkle  360 (364)
T KOG0290|consen  328 PILAYTAGGEVNQIQWSSSQPDWIAICF-GKKLE  360 (364)
T ss_pred             chhhhhccceeeeeeecccCCCEEEEEe-cCeee
Confidence            3344556678999999965 66888775 33343

>KOG1517|consensus

Probab=99.78  E-value=6.5e-17  Score=147.81  Aligned_cols=262  Identities=16%  Similarity=0.287  Sum_probs=174.2

Q ss_pred             cceEEEEEEeccCCCCCCcc-cCCCCcEEEEEec----CCEEEEEECCCeEEEEcC--CC---ceEE-ec-------cCC
Q psy2107          93 ENVIDVEYLESTPTPSPLDC-ILHDDWVSAIDFH----NDWILTGCYDHSVHIWTR--RG---EHKL-NI-------PGH  154 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~----~~~l~t~~~dg~i~iwd~--~~---~~~~-~~-------~~~  154 (391)
                      ...+.+|..+....-..+.. ..-...|+.+.+-    ..++++|+.||.|+||+-  ..   ..+. ..       .+.
T Consensus      1085 r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~ 1164 (1387)
T KOG1517|consen 1085 RERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGA 1164 (1387)
T ss_pred             cceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccC
Confidence            44566676554332111110 0134578888885    338999999999999964  21   1121 11       122


Q ss_pred             CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEE
Q psy2107         155 GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSE-SRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       155 ~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd  232 (391)
                      .+.-.-+.|   .+...+|++++.-..|+|||...+    ..+..+. +-...|+++.-+. .|+.+++|..||.|++||
T Consensus      1165 r~~~~v~dW---qQ~~G~Ll~tGd~r~IRIWDa~~E----~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD 1237 (1387)
T KOG1517|consen 1165 RGTGLVVDW---QQQSGHLLVTGDVRSIRIWDAHKE----QVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYD 1237 (1387)
T ss_pred             CCCCeeeeh---hhhCCeEEecCCeeEEEEEecccc----eeEeecccCCCccceeecccccCCceEEEeecCCceEEee
Confidence            233345677   444556666666899999995421    2233222 3345677776544 468999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc--ccEEEeccC--CeEEEEECCCeEEEEecccCce
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA--ISAVQWTAV--DEIITSSWDHTLKIWDAELGGM  308 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~  308 (391)
                      .+....                          ...+...+.|+..  |..+.+.+.  +.|++|+.+|.|++||++....
T Consensus      1238 ~R~a~~--------------------------ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~ 1291 (1387)
T KOG1517|consen 1238 RRMAPP--------------------------DSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSK 1291 (1387)
T ss_pred             cccCCc--------------------------cccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcc
Confidence            986332                          3466777788877  888888854  4599999999999999998522


Q ss_pred             eEEE--EC----CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE---EEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         309 KSEI--VG----NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK---STFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       309 ~~~~--~~----~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      ...+  ..    .+..+++..+++...+|+|+. +.|.||++....-....   ..+....+.+.+++|+| -..++|.|
T Consensus      1292 e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~~l~~~k~n~~F~~q~~gs~scL~FHP-~~~llAaG 1369 (1387)
T KOG1517|consen 1292 ETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGEQLNIIKYNPGFMGQRIGSVSCLAFHP-HRLLLAAG 1369 (1387)
T ss_pred             cccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChhhhcccccCcccccCcCCCcceeeecc-hhHhhhhc
Confidence            2221  12    224899999999999999998 99999998643211110   01111335689999999 66789999


Q ss_pred             eCCCcEEEEe
Q psy2107         380 SFDNSVKLWD  389 (391)
Q Consensus       380 ~~dg~v~iwd  389 (391)
                      +.|.+|.||.
T Consensus      1370 ~~Ds~V~iYs 1379 (1387)
T KOG1517|consen 1370 SADSTVSIYS 1379 (1387)
T ss_pred             cCCceEEEee
Confidence            9999999985

>COG2319 FOG: WD40 repeat [General function prediction only]

Probab=99.77  E-value=2.1e-15  Score=136.61  Aligned_cols=258  Identities=24%  Similarity=0.405  Sum_probs=185.4

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCC-CcEEEEEe-c--CC-EEEEEEC-CCeEEEEcCCC--ceEEeccCCCCCeeEEEE
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHD-DWVSAIDF-H--ND-WILTGCY-DHSVHIWTRRG--EHKLNIPGHGGPVKGVAW  163 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~-~--~~-~l~t~~~-dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~  163 (391)
                      .+..+.+|...... .......++. ..+..+.+ .  +. .++..+. |+.+.+|+...  .....+..|...|.+++|
T Consensus        85 ~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  163 (466)
T COG2319          85 SDGTIKLWDLDNGE-KLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAF  163 (466)
T ss_pred             CCCcEEEEEcCCCc-eeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEE
Confidence            45555655543332 0112222222 35666665 3  44 4454444 99999999975  777788999999999999


Q ss_pred             EecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCCCCC
Q psy2107         164 LYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-QFATGGWDCLLKIWSADISKERGD  241 (391)
Q Consensus       164 ~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~  241 (391)
                         ++++..+++++. |+.+++|+...    ...+..+.+|...|.+++|+|++. .+++++.|+.|++||...+     
T Consensus       164 ---~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~-----  231 (466)
T COG2319         164 ---SPDGKLLASGSSLDGTIKLWDLRT----GKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG-----  231 (466)
T ss_pred             ---CCCCCEEEecCCCCCceEEEEcCC----CceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCC-----
Confidence               666778888885 99999999642    456777778999999999999998 5555599999999987632     


Q ss_pred             CCCCCCCCccccccccccccCCCCCcee-eecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCce-eEEEEC-Cee
Q psy2107         242 PSENGDEGTTSKKRKKEYSSASSRTPLI-TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGM-KSEIVG-NKS  317 (391)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~-~~~  317 (391)
                                              .... .+.+|.... ...|++.+ .+++++.|+.+++|++..... ...+.. ...
T Consensus       232 ------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  286 (466)
T COG2319         232 ------------------------KLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSS  286 (466)
T ss_pred             ------------------------cEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCcc
Confidence                                    2333 566777665 44788665 688899999999999987664 444433 458


Q ss_pred             eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe--ccccCcEEEEEECCCCCCEEEEe-eCCCcEEEEecC
Q psy2107         318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSA-SFDNSVKLWDLR  391 (391)
Q Consensus       318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~-~~dg~v~iwdlr  391 (391)
                      +.++.|.|++..+++++.|+.+.+|+.....   .....  ..|...+..+.| +.+...++.+ ..|+.+.+|++.
T Consensus       287 v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~  359 (466)
T COG2319         287 VLSVAFSPDGKLLASGSSDGTVRLWDLETGK---LLSSLTLKGHEGPVSSLSF-SPDGSLLVSGGSDDGTIRLWDLR  359 (466)
T ss_pred             EEEEEECCCCCEEEEeeCCCcEEEEEcCCCc---eEEEeeecccCCceEEEEE-CCCCCEEEEeecCCCcEEeeecC
Confidence            9999999988888889889999999887655   22333  478878999999 4242344444 688999999863

>KOG1445|consensus

Probab=99.77  E-value=7.7e-18  Score=145.91  Aligned_cols=235  Identities=16%  Similarity=0.253  Sum_probs=166.4

Q ss_pred             ecCCEEEE--EECCCeEEEEcCC--CceEE-ec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC---Cc
Q psy2107         124 FHNDWILT--GCYDHSVHIWTRR--GEHKL-NI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES---NS  193 (391)
Q Consensus       124 ~~~~~l~t--~~~dg~i~iwd~~--~~~~~-~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~  193 (391)
                      .+..++|+  ++..|.|-||+++  ++..- .+  ......|+.+.|.|.  +...|+.++.||.|++|.+..+.   ..
T Consensus       589 an~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPF--D~~rLAVa~ddg~i~lWr~~a~gl~e~~  666 (1012)
T KOG1445|consen  589 ANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPF--DDERLAVATDDGQINLWRLTANGLPENE  666 (1012)
T ss_pred             eccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCC--ChHHeeecccCceEEEEEeccCCCCccc
Confidence            34444443  4556899999983  22111 11  124567999999877  66789999999999999976432   23


Q ss_pred             eeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         194 IECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ..+...+..|...|+++.|+| -...|++++.|-+|++||+.+.+                             ....+.
T Consensus       667 ~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~-----------------------------~~~~l~  717 (1012)
T KOG1445|consen  667 MTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAK-----------------------------LYSRLV  717 (1012)
T ss_pred             CCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhh-----------------------------hhheec
Confidence            445567888999999999999 34678999999999999998743                             556788


Q ss_pred             CccCcccEEEeccCCe-EEEEECCCeEEEEecccCc-eeEEEECCe--eeEEEEECCCCCEEEEeeCC----CcEEEEcC
Q psy2107         273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGG-MKSEIVGNK--SFFDVHYSPLSKLVITASAD----KQIRLYDP  344 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~-~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d----g~i~iwd~  344 (391)
                      +|.+.|..++|+|+++ +++.+.||+|++|.-+++. .+..-.+..  .--.+.|.-+|+++++.+.|    ..|.+||.
T Consensus       718 gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~A  797 (1012)
T KOG1445|consen  718 GHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDA  797 (1012)
T ss_pred             cCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhh
Confidence            9999999999997765 8899999999999988764 333333222  33457788899988877655    56889987


Q ss_pred             CCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+.... .....+....+ +.--.+.+|.+.+|+||-.|..|.+|.+
T Consensus       798 q~l~~~pl~t~~lDvaps-~LvP~YD~Ds~~lfltGKGD~~v~~yEv  843 (1012)
T KOG1445|consen  798 QTLDLRPLYTQVLDVAPS-PLVPHYDYDSNVLFLTGKGDRFVNMYEV  843 (1012)
T ss_pred             hhccCCcceeeeecccCc-cccccccCCCceEEEecCCCceEEEEEe
Confidence            654422 11222221111 1112245566778999999999999875

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.76  E-value=4.9e-15  Score=129.22  Aligned_cols=270  Identities=8%  Similarity=0.081  Sum_probs=159.6

Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEE-CCCeEEEEcCCC-ceEE--eccCCCCCeeEEEEEec
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGC-YDHSVHIWTRRG-EHKL--NIPGHGGPVKGVAWLYN  166 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~-~dg~i~iwd~~~-~~~~--~~~~~~~~v~~l~~~~~  166 (391)
                      ++.+.+|...............+.+....++++  +++|++++ .++.|.+|+++. ..+.  ......+....++|   
T Consensus        11 ~~~I~~~~~~~~g~l~~~~~~~~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~---   87 (330)
T PRK11028         11 SQQIHVWNLNHEGALTLLQVVDVPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESPLPGSPTHIST---   87 (330)
T ss_pred             CCCEEEEEECCCCceeeeeEEecCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeecCCCCceEEEE---
Confidence            455555555321111122222334456667776  66766654 578999999852 2221  11123344567888   


Q ss_pred             CCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       167 ~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~  244 (391)
                      +++++++++++. ++.|.+|+++........+..+. +.....+++++|+++++++++ .++.|.+||+++.......  
T Consensus        88 ~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~--  164 (330)
T PRK11028         88 DHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQ--  164 (330)
T ss_pred             CCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCccccc--
Confidence            777887777664 89999999753222222333333 234567789999999886554 5699999999752211000  


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC-CCeEEEEeccc--Cc--eeEEEECC---
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-DHTLKIWDAEL--GG--MKSEIVGN---  315 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-dg~i~iwd~~~--~~--~~~~~~~~---  315 (391)
                                          ......... ......+.|+|++. ++++.. ++.|.+||+..  ++  ....+...   
T Consensus       165 --------------------~~~~~~~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~  223 (330)
T PRK11028        165 --------------------EPAEVTTVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPAD  223 (330)
T ss_pred             --------------------CCCceecCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCc
Confidence                                000011111 23356789997655 656655 89999999973  32  23333211   


Q ss_pred             ----eeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         316 ----KSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       316 ----~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                          .....+.++|++++++++. .++.|.+|++...... ........ ......++++|++..++++...+++|.+|+
T Consensus       224 ~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~-~~~p~~~~~~~dg~~l~va~~~~~~v~v~~  302 (330)
T PRK11028        224 FSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQPT-ETQPRGFNIDHSGKYLIAAGQKSHHISVYE  302 (330)
T ss_pred             CCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEEec-cccCCceEECCCCCEEEEEEccCCcEEEEE
Confidence                1223588999999998885 4789999998654321 12222221 124568999996655555555699999997


Q ss_pred             c
Q psy2107         390 L  390 (391)
Q Consensus       390 l  390 (391)
                      +
T Consensus       303 ~  303 (330)
T PRK11028        303 I  303 (330)
T ss_pred             E
Confidence            5

>KOG1310|consensus

Probab=99.75  E-value=2.6e-17  Score=140.29  Aligned_cols=220  Identities=10%  Similarity=0.180  Sum_probs=157.9

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ..+.||++.|+|+.|+  |.+|++|+.|-.+.|||. ..+.+..+ .+|.+.|.++.|.|. .+...+++|..|..|+++
T Consensus        44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~-tnnriv~sgAgDk~i~lf  122 (758)
T KOG1310|consen   44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY-TNNRIVLSGAGDKLIKLF  122 (758)
T ss_pred             hhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc-CCCeEEEeccCcceEEEE
Confidence            4466899999999998  889999999999999998 44444443 589999999999995 467799999999999999


Q ss_pred             eecCCC------CceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         186 EWKVES------NSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       186 d~~~~~------~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |+....      +.......+..|...|..++..|++ ..+.++++||+|+-+|++..........              
T Consensus       123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~--------------  188 (758)
T KOG1310|consen  123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDED--------------  188 (758)
T ss_pred             ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCcccc--------------
Confidence            976321      2234456677899999999999988 7899999999999999986432110000              


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEeccc--------Cc----------eeEEEEC----
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAEL--------GG----------MKSEIVG----  314 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~--------~~----------~~~~~~~----  314 (391)
                           -...+..+...--...|+..+|.  .+|++|+.|-..++||.+.        +.          ++..+..    
T Consensus       189 -----~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlk  263 (758)
T KOG1310|consen  189 -----CPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLK  263 (758)
T ss_pred             -----ccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCcccc
Confidence                 00001111111123457777753  4699999999999999431        11          1111110    


Q ss_pred             ---------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107         315 ---------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG  349 (391)
Q Consensus       315 ---------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~  349 (391)
                               +..++-++|+|+|.-|++.-....|+++|+...+.
T Consensus       264 n~~gn~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~  307 (758)
T KOG1310|consen  264 NSQGNLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKS  307 (758)
T ss_pred             CcccccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCC
Confidence                     11356688999998777776677899999976553

>KOG1334|consensus

Probab=99.75  E-value=4e-17  Score=137.18  Aligned_cols=251  Identities=18%  Similarity=0.286  Sum_probs=183.9

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEe-ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLN-IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~-~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ..+-+|.+.|..|.|+  |+.|++|+.|..|.+||. ....... ..+|...|....|.|++ +...+++++.||.|++=
T Consensus       136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s-~d~ti~~~s~dgqvr~s  214 (559)
T KOG1334|consen  136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFS-GDRTIVTSSRDGQVRVS  214 (559)
T ss_pred             hcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCC-CCcCceeccccCceeee
Confidence            3455799999999998  899999999999999998 4444444 45899999999999975 45678999999999998


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      .+. .++..+-...+..|.++|..++.-|.. .-|.+++.|+.+.-+|++......                        
T Consensus       215 ~i~-~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~------------------------  269 (559)
T KOG1334|consen  215 EIL-ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE------------------------  269 (559)
T ss_pred             eec-cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccc------------------------
Confidence            764 233334455667799999999999965 458999999999999998754321                        


Q ss_pred             CCceeeecCccC---cccEEEeccC--CeEEEEECCCeEEEEecccCce------eEEEE-------CCeeeEEEEECCC
Q psy2107         265 RTPLITLKGHKE---AISAVQWTAV--DEIITSSWDHTLKIWDAELGGM------KSEIV-------GNKSFFDVHYSPL  326 (391)
Q Consensus       265 ~~~~~~~~~~~~---~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~------~~~~~-------~~~~i~~~~~~p~  326 (391)
                        ....-..+..   ....++..|.  +.+++++.|..+++||.+.-..      +..+.       .+..|++++|+.+
T Consensus       270 --~~~cr~~~~~~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~  347 (559)
T KOG1334|consen  270 --KFVCREADEKERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHD  347 (559)
T ss_pred             --eeeeeccCCccceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCC
Confidence              1111222222   3456777753  4699999999999999874321      12221       1237999999988


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCc----------ceEEEEeccccC--cEEEEEE-CCCCCCEEEEeeCCCcEEEEe
Q psy2107         327 SKLVITASADKQIRLYDPKVKEG----------AIVKSTFSSHKE--WVQSVRW-SPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~----------~~~~~~~~~h~~--~v~~~~~-~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +.-|+++..|-.|++|....+.+          +.....+++|..  .|..+-| -| ...+++||++-|.|.||+
T Consensus       348 ~sElLaSYnDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGP-rsEyVvSGSDCGhIFiW~  422 (559)
T KOG1334|consen  348 GSELLASYNDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGP-RSEYVVSGSDCGHIFIWD  422 (559)
T ss_pred             ccceeeeecccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccC-ccceEEecCccceEEEEe
Confidence            77666677788999996554433          223334788865  4666655 46 567899999999999998

>KOG1524|consensus

Probab=99.75  E-value=4.6e-17  Score=138.45  Aligned_cols=206  Identities=17%  Similarity=0.246  Sum_probs=155.6

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER  205 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  205 (391)
                      .+.++.++.||.+.|.+-.++....+..|.+++.+-.|   +++|.-|+++++||.|++|.-     .+....++.....
T Consensus        75 ~d~~~i~s~DGkf~il~k~~rVE~sv~AH~~A~~~gRW---~~dGtgLlt~GEDG~iKiWSr-----sGMLRStl~Q~~~  146 (737)
T KOG1524|consen   75 SDTLLICSNDGRFVILNKSARVERSISAHAAAISSGRW---SPDGAGLLTAGEDGVIKIWSR-----SGMLRSTVVQNEE  146 (737)
T ss_pred             cceEEEEcCCceEEEecccchhhhhhhhhhhhhhhccc---CCCCceeeeecCCceEEEEec-----cchHHHHHhhcCc
Confidence            35888999999999999888888889999999999999   778999999999999999972     1222223334567


Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      +|.|++|.|+.+.++-+.. +.+.+=.+..                             ...+..++.|.+-|.++.|++
T Consensus       147 ~v~c~~W~p~S~~vl~c~g-~h~~IKpL~~-----------------------------n~k~i~WkAHDGiiL~~~W~~  196 (737)
T KOG1524|consen  147 SIRCARWAPNSNSIVFCQG-GHISIKPLAA-----------------------------NSKIIRWRAHDGLVLSLSWST  196 (737)
T ss_pred             eeEEEEECCCCCceEEecC-CeEEEeeccc-----------------------------ccceeEEeccCcEEEEeecCc
Confidence            8999999998776554433 4555544432                             335667889999999999995


Q ss_pred             -CCeEEEEECCCeEEEEecccCceeEEE-ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         286 -VDEIITSSWDHTLKIWDAELGGMKSEI-VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       286 -~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                       ++.+++|+.|-..++||.. |..+..- .+..+|++++|.|+ +.++.++. ++.++=              ....+.|
T Consensus       197 ~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~-nt~R~~--------------~p~~GSi  259 (737)
T KOG1524|consen  197 QSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE-KDYLLWSY-NTARFS--------------SPRVGSI  259 (737)
T ss_pred             cccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc-cceeeeee-eeeeec--------------CCCccce
Confidence             5669999999999999975 4444444 44559999999999 66666653 334411              1245679


Q ss_pred             EEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         364 QSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      ..++||+ ++..++.|+..|.+.+
T Consensus       260 fnlsWS~-DGTQ~a~gt~~G~v~~  282 (737)
T KOG1524|consen  260 FNLSWSA-DGTQATCGTSTGQLIV  282 (737)
T ss_pred             EEEEEcC-CCceeeccccCceEEE
Confidence            9999999 5567888888887654

>KOG1188|consensus

Probab=99.75  E-value=8.7e-17  Score=129.36  Aligned_cols=190  Identities=12%  Similarity=0.231  Sum_probs=143.1

Q ss_pred             eEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       171 ~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ..+|++...|.|++||..    +...+..+.++...+..++|..  ....+.+++.||.|++||++....          
T Consensus        41 ~~vav~lSngsv~lyd~~----tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e----------  106 (376)
T KOG1188|consen   41 TAVAVSLSNGSVRLYDKG----TGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAE----------  106 (376)
T ss_pred             eeEEEEecCCeEEEEecc----chhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchh----------
Confidence            468899999999999954    4567888999999999999977  567799999999999999987443          


Q ss_pred             CccccccccccccCCCCCceeeecCcc-CcccEEEec-cCCeEEEEE----CCCeEEEEecccCce-eEEEE--CCeeeE
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHK-EAISAVQWT-AVDEIITSS----WDHTLKIWDAELGGM-KSEIV--GNKSFF  319 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~l~s~~----~dg~i~iwd~~~~~~-~~~~~--~~~~i~  319 (391)
                                       ........+. .+..+++.+ ..+.+++|+    .+-.|.+||++..+. +..+.  ++..|+
T Consensus       107 -----------------~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT  169 (376)
T KOG1188|consen  107 -----------------SARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVT  169 (376)
T ss_pred             -----------------hhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcce
Confidence                             2334444444 455666665 444555553    467899999998766 44443  456999


Q ss_pred             EEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         320 DVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       320 ~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++.|+|. .++|++||.||.|.+||+......-.+.....|...|..+.|...+-..+.+-+..++..+|++.
T Consensus       170 ~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele  242 (376)
T KOG1188|consen  170 QLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELE  242 (376)
T ss_pred             eEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEcc
Confidence            9999997 56999999999999999876433222223335778899999997554458888889999999873

>KOG1240|consensus

Probab=99.75  E-value=5.8e-16  Score=143.77  Aligned_cols=247  Identities=17%  Similarity=0.276  Sum_probs=169.4

Q ss_pred             cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCC---Cc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107         111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRR---GE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD  179 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~---~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d  179 (391)
                      .+..|+..|..++.+   +.++++||.||+|++|+..   +.     ...++......+.++..+   +.++.+|.++.|
T Consensus      1043 hL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~---~~~~~~Av~t~D 1119 (1431)
T KOG1240|consen 1043 HLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC---GNGDQFAVSTKD 1119 (1431)
T ss_pred             hhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec---cCCCeEEEEcCC
Confidence            445699999998887   4699999999999999972   21     222344457788888884   467789999999


Q ss_pred             CcEEEEeecCCCCce---eEEEE--------------E----------------------------------ecCCCCeE
Q psy2107         180 QTAMIWEWKVESNSI---ECIHV--------------C----------------------------------RGHERGLE  208 (391)
Q Consensus       180 g~v~iwd~~~~~~~~---~~~~~--------------~----------------------------------~~~~~~v~  208 (391)
                      |.|++.+++......   .+...              +                                  ....+.|+
T Consensus      1120 G~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vT 1199 (1431)
T KOG1240|consen 1120 GSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVT 1199 (1431)
T ss_pred             CeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCcccccee
Confidence            999999865310000   00000              0                                  01125789


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEecc--
Q psy2107         209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTA--  285 (391)
Q Consensus       209 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~--  285 (391)
                      +++.+|.++++++|+..|.+.+||++-..                             ++..+. .+..++..+..++  
T Consensus      1200 Si~idp~~~WlviGts~G~l~lWDLRF~~-----------------------------~i~sw~~P~~~~i~~v~~~~~~ 1250 (1431)
T KOG1240|consen 1200 SIVIDPWCNWLVIGTSRGQLVLWDLRFRV-----------------------------PILSWEHPARAPIRHVWLCPTY 1250 (1431)
T ss_pred             EEEecCCceEEEEecCCceEEEEEeecCc-----------------------------eeecccCcccCCcceEEeeccC
Confidence            99999999999999999999999998633                             333332 3456777777662  


Q ss_pred             C--CeEEEE-E-CCCeEEEEecccCceeEEEECCe--------------------eeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         286 V--DEIITS-S-WDHTLKIWDAELGGMKSEIVGNK--------------------SFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       286 ~--~~l~s~-~-~dg~i~iwd~~~~~~~~~~~~~~--------------------~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                      .  ...+++ + ..+.|.+|++.+|.....+....                    ....+.+...+.++.+|+.|..|+.
T Consensus      1251 ~~~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~ 1330 (1431)
T KOG1240|consen 1251 PQESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRK 1330 (1431)
T ss_pred             CCCceEEEecccCCCceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceee
Confidence            2  334444 3 57889999999987766664331                    1122334444668899999999999


Q ss_pred             EcCCCCCcc--------------------------eE-------------------EE--------EeccccCcEEEEEE
Q psy2107         342 YDPKVKEGA--------------------------IV-------------------KS--------TFSSHKEWVQSVRW  368 (391)
Q Consensus       342 wd~~~~~~~--------------------------~~-------------------~~--------~~~~h~~~v~~~~~  368 (391)
                      ||.......                          ..                   ..        .-..|..+|++|++
T Consensus      1331 wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~ 1410 (1431)
T KOG1240|consen 1331 WDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMAT 1410 (1431)
T ss_pred             ccCCCcccccccccCccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhh
Confidence            997543210                          00                   00        01237789999999


Q ss_pred             CCCCCCEEEEeeCCCcEEEEe
Q psy2107         369 SPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ......+|++++.||.|+||.
T Consensus      1411 ~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1411 LKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred             hccCccEEEEecCCCeeeecC
Confidence            886777999999999999994

>KOG1009|consensus

Probab=99.74  E-value=8.2e-16  Score=126.53  Aligned_cols=266  Identities=16%  Similarity=0.202  Sum_probs=182.1

Q ss_pred             ceeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEEeccCCCC-------CCcccCCCCcEEEEEec--CCEEEEEECC
Q psy2107          66 IQFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYLESTPTPS-------PLDCILHDDWVSAIDFH--NDWILTGCYD  135 (391)
Q Consensus        66 ~~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~V~~~~~~--~~~l~t~~~d  135 (391)
                      ..++|..++. .+++          ...+..+++|...+..+..       ...+..|...|+++.|+  |++||+|+.+
T Consensus        17 ~s~dfq~n~~~~laT----------~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~   86 (434)
T KOG1009|consen   17 YSVDFQKNSLNKLAT----------AGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDG   86 (434)
T ss_pred             EEEEeccCcccceec----------ccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCC
Confidence            4457776664 4444          2357788888887666544       13345699999999998  6699999999


Q ss_pred             CeEEEEcCC--------C-----c----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107         136 HSVHIWTRR--------G-----E----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       136 g~i~iwd~~--------~-----~----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      |.|.+|-..        +     +    ....+.+|...|..++|   ++++.++++++.|..+++||+.    .+....
T Consensus        87 g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~W---s~d~~~l~s~s~dns~~l~Dv~----~G~l~~  159 (434)
T KOG1009|consen   87 GEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAW---SPDSNFLVSGSVDNSVRLWDVH----AGQLLA  159 (434)
T ss_pred             ceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhc---cCCCceeeeeeccceEEEEEec----cceeEe
Confidence            999999643        2     1    22356689999999999   7789999999999999999975    557788


Q ss_pred             EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC-----------------------------------C
Q psy2107         199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP-----------------------------------S  243 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-----------------------------------~  243 (391)
                      .+..|...+..++|.|-++++++-+.|...+.+.+...+.....                                   +
T Consensus       160 ~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfT  239 (434)
T KOG1009|consen  160 ILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFT  239 (434)
T ss_pred             eccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccC
Confidence            88999999999999999999999988886666665433221100                                   1


Q ss_pred             CCCCCCc--------cccc-c--ccccccCCCCCceeeecCccCcccEEEec------------------cCCeEEEEEC
Q psy2107         244 ENGDEGT--------TSKK-R--KKEYSSASSRTPLITLKGHKEAISAVQWT------------------AVDEIITSSW  294 (391)
Q Consensus       244 ~~~~~~~--------~~~~-~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------------------~~~~l~s~~~  294 (391)
                      +.+....        .... .  ...+......+|...+.+...++..+.++                  |.+.+++...
T Consensus       240 PdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt  319 (434)
T KOG1009|consen  240 PDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT  319 (434)
T ss_pred             CCCcEEEcccceeeeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee
Confidence            1110000        0000 0  00011112234444444444444444443                  3344445555


Q ss_pred             CCeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      ...|.+||.++..++....  +-..++.++|+++|.+++..+.||...+.-+...+
T Consensus       320 ~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~e  375 (434)
T KOG1009|consen  320 KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWE  375 (434)
T ss_pred             cceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchh
Confidence            6789999999877776654  33489999999999999999999988877665543

>KOG2110|consensus

Probab=99.74  E-value=1.8e-14  Score=117.37  Aligned_cols=190  Identities=13%  Similarity=0.213  Sum_probs=148.4

Q ss_pred             cEEEEEecCCEEEEEECCC--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         118 WVSAIDFHNDWILTGCYDH--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      .|--+-|+..++|..+.+.  .+++++.+......-.....+|.+|.+     +.+.|+.+-.+. |.|||++    ..+
T Consensus        48 ~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~Vrm-----Nr~RLvV~Lee~-IyIydI~----~Mk  117 (391)
T KOG2110|consen   48 SIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRM-----NRKRLVVCLEES-IYIYDIK----DMK  117 (391)
T ss_pred             EEEEeecccceeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEE-----ccceEEEEEccc-EEEEecc----cce
Confidence            5666678888777777654  489999865555444446778999998     445677766554 9999976    445


Q ss_pred             EEEEEe---cCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         196 CIHVCR---GHERGLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       196 ~~~~~~---~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      .++++.   .+...+.++.+++.+.+++--+  ..|.|.+||..+                             .+++..
T Consensus       118 lLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~n-----------------------------l~~v~~  168 (391)
T KOG2110|consen  118 LLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTIN-----------------------------LQPVNT  168 (391)
T ss_pred             eehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEccc-----------------------------ceeeeE
Confidence            555554   3455677777777777887543  358999999976                             567888


Q ss_pred             ecCccCcccEEEeccCC-eEEEEECCCe-EEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         271 LKGHKEAISAVQWTAVD-EIITSSWDHT-LKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~~~-~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      +..|.+++.+++|+++| .|+++|..|+ ||++.+.+|+.+..|+...   .|.+++|+|++.+|++.+..++|++|.+.
T Consensus       169 I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~  248 (391)
T KOG2110|consen  169 INAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE  248 (391)
T ss_pred             EEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence            99999999999999655 5888888886 7999999999999998654   78999999999999999999999999875


Q ss_pred             C
Q psy2107         346 V  346 (391)
Q Consensus       346 ~  346 (391)
                      .
T Consensus       249 ~  249 (391)
T KOG2110|consen  249 K  249 (391)
T ss_pred             c
Confidence            4

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.74  E-value=9.2e-16  Score=137.88  Aligned_cols=211  Identities=16%  Similarity=0.222  Sum_probs=143.1

Q ss_pred             CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107         135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVT  211 (391)
Q Consensus       135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~  211 (391)
                      +..|.+||.++.....+..|...+.+.+|   +|+++.|+.++.+   ..|.+||+.  ++....+..+.+|   ...++
T Consensus       183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~w---SPDG~~la~~s~~~~~~~i~i~dl~--tg~~~~l~~~~g~---~~~~~  254 (429)
T PRK01742        183 PYEVRVADYDGFNQFIVNRSSQPLMSPAW---SPDGSKLAYVSFENKKSQLVVHDLR--SGARKVVASFRGH---NGAPA  254 (429)
T ss_pred             eEEEEEECCCCCCceEeccCCCccccceE---cCCCCEEEEEEecCCCcEEEEEeCC--CCceEEEecCCCc---cCcee
Confidence            46899999988777777788889999999   7788888877654   369999964  3333444444443   34689


Q ss_pred             EcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E
Q psy2107         212 VSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I  289 (391)
Q Consensus       212 ~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l  289 (391)
                      |+|+|+.|+.++ .+|.+.||.++..                            ......+..+...+....|+|++. +
T Consensus       255 wSPDG~~La~~~~~~g~~~Iy~~d~~----------------------------~~~~~~lt~~~~~~~~~~wSpDG~~i  306 (429)
T PRK01742        255 FSPDGSRLAFASSKDGVLNIYVMGAN----------------------------GGTPSQLTSGAGNNTEPSWSPDGQSI  306 (429)
T ss_pred             ECCCCCEEEEEEecCCcEEEEEEECC----------------------------CCCeEeeccCCCCcCCEEECCCCCEE
Confidence            999999888764 6887766644320                            012334455666788899997765 5


Q ss_pred             EEEE-CCCeEEEEecccCc-eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         290 ITSS-WDHTLKIWDAELGG-MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       290 ~s~~-~dg~i~iwd~~~~~-~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      +.++ .++...||++.... ....+ .+.. ....|+|+|++|+.++.++ +.+||+.++..   ......+  ...+++
T Consensus       307 ~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~-~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~---~~lt~~~--~~~~~~  378 (429)
T PRK01742        307 LFTSDRSGSPQVYRMSASGGGASLV-GGRG-YSAQISADGKTLVMINGDN-VVKQDLTSGST---EVLSSTF--LDESPS  378 (429)
T ss_pred             EEEECCCCCceEEEEECCCCCeEEe-cCCC-CCccCCCCCCEEEEEcCCC-EEEEECCCCCe---EEecCCC--CCCCce
Confidence            5444 57888888875422 22222 2222 4678999999998887655 66699877652   2111222  235678


Q ss_pred             ECCCCCCEEEEeeCCCcEEEEec
Q psy2107         368 WSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       368 ~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+| ++.+|+.++.+|.+.+|++
T Consensus       379 ~sP-dG~~i~~~s~~g~~~~l~~  400 (429)
T PRK01742        379 ISP-NGIMIIYSSTQGLGKVLQL  400 (429)
T ss_pred             ECC-CCCEEEEEEcCCCceEEEE
Confidence            999 6678888888998888864

>KOG1517|consensus

Probab=99.74  E-value=1.1e-15  Score=140.05  Aligned_cols=238  Identities=14%  Similarity=0.217  Sum_probs=163.3

Q ss_pred             EEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-C
Q psy2107         120 SAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-N  192 (391)
Q Consensus       120 ~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~  192 (391)
                      ..+.|+  ...++++...-.|+|||. ++..+..+..   ....|+.+.+.. ..+..++++|+.||.|+||+--... .
T Consensus      1068 k~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liN-e~D~aLlLtas~dGvIRIwk~y~~~~~ 1146 (1387)
T KOG1517|consen 1068 KTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELIN-EQDDALLLTASSDGVIRIWKDYADKWK 1146 (1387)
T ss_pred             ceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeec-ccchhheeeeccCceEEEecccccccC
Confidence            345555  557777877789999999 4555554442   345788998875 4567799999999999999732221 3


Q ss_pred             ceeEEEEEecC-------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         193 SIECIHVCRGH-------ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       193 ~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      ..+.+....+-       .+.=.-+.|..+..+|+++|.-..|+|||.+.....                          
T Consensus      1147 ~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~-------------------------- 1200 (1387)
T KOG1517|consen 1147 KPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVV-------------------------- 1200 (1387)
T ss_pred             CceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeE--------------------------
Confidence            33444333321       111244678777777887777889999999764432                          


Q ss_pred             Cceeeec-CccCcccEEEec--cCCeEEEEECCCeEEEEecccCce---eEEEECCe---eeEEEEECCCCC-EEEEeeC
Q psy2107         266 TPLITLK-GHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGGM---KSEIVGNK---SFFDVHYSPLSK-LVITASA  335 (391)
Q Consensus       266 ~~~~~~~-~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~---~i~~~~~~p~~~-~l~~g~~  335 (391)
                         ..+. +....|+++.-+  .++.+++|..||.|++||.+....   +...+.|.   +|..+.+.+.|- -|++|+.
T Consensus      1201 ---~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~ 1277 (1387)
T KOG1517|consen 1201 ---ADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQ 1277 (1387)
T ss_pred             ---eecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeecc
Confidence               2221 234456666555  346799999999999999986543   44444443   489999988765 4999999


Q ss_pred             CCcEEEEcCCCCCcceEEEEecccc--C-cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSSHK--E-WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~h~--~-~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|.|++||++........ ....|.  + ..+++..++ ...++|+|+. +.|+||++
T Consensus      1278 ~G~I~~~DlR~~~~e~~~-~iv~~~~yGs~lTal~VH~-hapiiAsGs~-q~ikIy~~ 1332 (1387)
T KOG1517|consen 1278 DGDIQLLDLRMSSKETFL-TIVAHWEYGSALTALTVHE-HAPIIASGSA-QLIKIYSL 1332 (1387)
T ss_pred             CCeEEEEecccCcccccc-eeeeccccCccceeeeecc-CCCeeeecCc-ceEEEEec
Confidence            999999999974222121 222333  3 589999999 6678999988 99999996

>KOG1310|consensus

Probab=99.72  E-value=2.6e-16  Score=134.36  Aligned_cols=217  Identities=20%  Similarity=0.256  Sum_probs=157.3

Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcC--CCCEEEEEe
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSE--SRQQFATGG  223 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~--~~~~l~sg~  223 (391)
                      +...+.+|.+.|.|+.|   +.+|.+|++|+.|-.+.|||.-    ..+.++.+ .+|...|.+++|-|  +.+.+++|.
T Consensus        42 lE~eL~GH~GCVN~LeW---n~dG~lL~SGSDD~r~ivWd~~----~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgA  114 (758)
T KOG1310|consen   42 LEAELTGHTGCVNCLEW---NADGELLASGSDDTRLIVWDPF----EYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGA  114 (758)
T ss_pred             hhhhhccccceecceee---cCCCCEEeecCCcceEEeecch----hcceeeeeecccccceeEEeeeccCCCeEEEecc
Confidence            34467799999999999   8899999999999999999953    33444443 58999999999998  567899999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEE
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIW  301 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iw  301 (391)
                      .|..|+++|+...+.....                   .........+..|...|..++-.|++  .+.+++.||+++-+
T Consensus       115 gDk~i~lfdl~~~~~~~~d-------------------~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQy  175 (758)
T KOG1310|consen  115 GDKLIKLFDLDSSKEGGMD-------------------HGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQY  175 (758)
T ss_pred             CcceEEEEecccccccccc-------------------cCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeee
Confidence            9999999999764432211                   01123455677899999999988654  59999999999999


Q ss_pred             ecccCceeE-EEEC--------C--eeeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCC-----------cce----EEE
Q psy2107         302 DAELGGMKS-EIVG--------N--KSFFDVHYSPLS-KLVITASADKQIRLYDPKVKE-----------GAI----VKS  354 (391)
Q Consensus       302 d~~~~~~~~-~~~~--------~--~~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~-----------~~~----~~~  354 (391)
                      |++...... ....        .  -...|+.++|.. .+|++|+.|-..++||.+...           .+.    ++.
T Consensus       176 DiREph~c~p~~~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~  255 (758)
T KOG1310|consen  176 DIREPHVCNPDEDCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVR  255 (758)
T ss_pred             cccCCccCCccccccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhh
Confidence            998643211 1111        1  256789999975 589999999999999943210           000    111


Q ss_pred             E-ecccc-----------CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         355 T-FSSHK-----------EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       355 ~-~~~h~-----------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      . ..+|.           ..++-++|+|++..+|++-+.+ .|+++|+
T Consensus       256 yf~p~hlkn~~gn~~~~~~~~t~vtfnpNGtElLvs~~gE-hVYlfdv  302 (758)
T KOG1310|consen  256 YFSPGHLKNSQGNLDRYITCCTYVTFNPNGTELLVSWGGE-HVYLFDV  302 (758)
T ss_pred             eecCccccCcccccccceeeeEEEEECCCCcEEEEeeCCe-EEEEEee
Confidence            1 12232           1267789999777788877755 7888886

>KOG1523|consensus

Probab=99.72  E-value=6.4e-16  Score=123.42  Aligned_cols=205  Identities=17%  Similarity=0.255  Sum_probs=163.0

Q ss_pred             CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy2107         153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS-IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW  231 (391)
Q Consensus       153 ~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw  231 (391)
                      .-..+|+|.+|   +++...+|.+.....|.||...  ... ++..+++..|...|++++|+|..+.|++++.|..-++|
T Consensus         8 ~~~~pitchAw---n~drt~iAv~~~~~evhiy~~~--~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw   82 (361)
T KOG1523|consen    8 RLLEPITCHAW---NSDRTQIAVSPNNHEVHIYSML--GADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVW   82 (361)
T ss_pred             eccCceeeeee---cCCCceEEeccCCceEEEEEec--CCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCcccc
Confidence            34578999999   7889999999999999999854  444 78899999999999999999999999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCcee-
Q psy2107         232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMK-  309 (391)
Q Consensus       232 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~-  309 (391)
                      ....+.                          ..++...+..+....+++.|+|. +.|++|+.-..|.||-++...-- 
T Consensus        83 ~~~~~~--------------------------~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWW  136 (361)
T KOG1523|consen   83 TQPSGG--------------------------TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWW  136 (361)
T ss_pred             ccCCCC--------------------------eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccccee
Confidence            984322                          24566677788999999999964 56999999999999987654322 


Q ss_pred             ----EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-----Cc----------ceEEEEeccccCcEEEEEECC
Q psy2107         310 ----SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK-----EG----------AIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       310 ----~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~-----~~----------~~~~~~~~~h~~~v~~~~~~~  370 (391)
                          ......+.|.+++|+|++-+|++|+.|+..+||..--+     ..          ..++.++....+.|..+.|+|
T Consensus       137 VsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~  216 (361)
T KOG1523|consen  137 VSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSP  216 (361)
T ss_pred             hhhhhCCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCC
Confidence                11223457899999999999999999999999964211     10          012334445668899999999


Q ss_pred             CCCCEEEEeeCCCcEEEEe
Q psy2107         371 IDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       371 ~~~~~l~s~~~dg~v~iwd  389 (391)
                       .+..|+-.+.|+++.+=|
T Consensus       217 -sG~~lawv~Hds~v~~~d  234 (361)
T KOG1523|consen  217 -SGNRLAWVGHDSTVSFVD  234 (361)
T ss_pred             -CCCEeeEecCCCceEEee
Confidence             566799999999988755

>PRK01742 tolB translocation protein TolB; Provisional

Probab=99.72  E-value=2.4e-15  Score=135.20  Aligned_cols=221  Identities=11%  Similarity=0.062  Sum_probs=148.8

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAM  183 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~  183 (391)
                      ..+..|...+.+.+|+  |+.|+.++.+   ..|++||+.+.....+....+....++|   +|+++.|+.++ .+|.+.
T Consensus       197 ~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~w---SPDG~~La~~~~~~g~~~  273 (429)
T PRK01742        197 FIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAF---SPDGSRLAFASSKDGVLN  273 (429)
T ss_pred             eEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeE---CCCCCEEEEEEecCCcEE
Confidence            3455688889999998  6677777654   3799999965433333322333457899   77888777664 688888


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +|.++.....   ...+..+...+....|+|+|+.|+.++ .+|...+|+++....                        
T Consensus       274 Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~------------------------  326 (429)
T PRK01742        274 IYVMGANGGT---PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG------------------------  326 (429)
T ss_pred             EEEEECCCCC---eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC------------------------
Confidence            8876544433   234455666788999999999877655 578889998754211                        


Q ss_pred             CCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                          ....+ .+..  ....|+|++. ++.++.++ +.+||+.+++....... .......|+|+|++|+.++.++.+.+
T Consensus       327 ----~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~  397 (429)
T PRK01742        327 ----GASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGKV  397 (429)
T ss_pred             ----CeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCceE
Confidence                11112 2322  3567887665 65665554 56699988875433222 23456789999999999999998888


Q ss_pred             EcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      |++....+. ....+..|.+.+...+|+|
T Consensus       398 l~~~~~~G~-~~~~l~~~~g~~~~p~wsp  425 (429)
T PRK01742        398 LQLVSADGR-FKARLPGSDGQVKFPAWSP  425 (429)
T ss_pred             EEEEECCCC-ceEEccCCCCCCCCcccCC
Confidence            876432222 5567778888899999998

>KOG0322|consensus

Probab=99.72  E-value=7e-16  Score=119.97  Aligned_cols=229  Identities=16%  Similarity=0.170  Sum_probs=161.6

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEE---e---------------
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKL---N---------------  150 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~---~---------------  150 (391)
                      ....+.+.+|..+...... .....|+..|+.+..- ++.+.+-+.|+.+.+|++......   .               
T Consensus        31 g~~~G~V~~w~lqt~r~~~-~~r~~g~~~it~lq~~p~d~l~tqgRd~~L~lw~ia~s~~i~i~Si~~nslgFCrfSl~~  109 (323)
T KOG0322|consen   31 GLSVGIVKMWVLQTERDLP-LIRLFGRLFITNLQSIPNDSLDTQGRDPLLILWTIAYSAFISIHSIVVNSLGFCRFSLVK  109 (323)
T ss_pred             ccccceEEEEEeecCccch-hhhhhccceeeceeecCCcchhhcCCCceEEEEEccCcceEEEeeeeccccccccceecc
Confidence            3466788888876554432 2222478889888877 589999999999999987431000   0               


Q ss_pred             ----------c--------------------------cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-
Q psy2107         151 ----------I--------------------------PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS-  193 (391)
Q Consensus       151 ----------~--------------------------~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-  193 (391)
                                +                          .+..+.+.|..+-......-++++|-++|.+.+||+..++.. 
T Consensus       110 ~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~  189 (323)
T KOG0322|consen  110 KPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKII  189 (323)
T ss_pred             CCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceee
Confidence                      0                          012244555554222222336788899999999998754221 


Q ss_pred             -----eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         194 -----IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       194 -----~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                           .........|..+|.++.+.+....=++|+.+..+..|.++.....                         ....
T Consensus       190 ~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gs-------------------------lq~~  244 (323)
T KOG0322|consen  190 QLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGS-------------------------LQIR  244 (323)
T ss_pred             ccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCc-------------------------cccc
Confidence                 1233344578999999999987666788888889999998653210                         1111


Q ss_pred             eeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      .........|..+..-|++. +++++.|+.||+|+.++.+++..++.|. .+++++|+|+...+|+++.|++|.+|++
T Consensus       245 ~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL  322 (323)
T KOG0322|consen  245 KEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL  322 (323)
T ss_pred             ceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence            12222344577777776665 8899999999999999999999998776 8999999999999999999999999986

>PRK11028 6-phosphogluconolactonase; Provisional

Probab=99.71  E-value=2.7e-14  Score=124.54  Aligned_cols=229  Identities=7%  Similarity=0.153  Sum_probs=145.2

Q ss_pred             EEEEECCCeEEEEcCC--Cc--eEEeccCCCCCeeEEEEEecCCCCeEEEEE-eCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         129 ILTGCYDHSVHIWTRR--GE--HKLNIPGHGGPVKGVAWLYNDGKDAAFISV-STDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       129 l~t~~~dg~i~iwd~~--~~--~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      +++...++.|.+|++.  +.  .+..+ .+.+....+++   ++++++|+++ ..++.|.+|+++ ..+......... .
T Consensus         5 y~~~~~~~~I~~~~~~~~g~l~~~~~~-~~~~~~~~l~~---spd~~~lyv~~~~~~~i~~~~~~-~~g~l~~~~~~~-~   78 (330)
T PRK11028          5 YIASPESQQIHVWNLNHEGALTLLQVV-DVPGQVQPMVI---SPDKRHLYVGVRPEFRVLSYRIA-DDGALTFAAESP-L   78 (330)
T ss_pred             EEEcCCCCCEEEEEECCCCceeeeeEE-ecCCCCccEEE---CCCCCEEEEEECCCCcEEEEEEC-CCCceEEeeeec-C
Confidence            4455778999999994  22  22233 34456777888   6778877665 458899999975 333333333332 2


Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      ......++++|+++++++++. ++.|.+|++++....                         ......+. +......++
T Consensus        79 ~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~-------------------------~~~~~~~~-~~~~~~~~~  132 (330)
T PRK11028         79 PGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIP-------------------------VAPIQIIE-GLEGCHSAN  132 (330)
T ss_pred             CCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCC-------------------------CCceeecc-CCCcccEeE
Confidence            345678999999998888764 889999999642211                         01112222 223356678


Q ss_pred             eccCC-eEEE-EECCCeEEEEecccCceeE-------EEECCeeeEEEEECCCCCEEEEeeC-CCcEEEEcCCCCCc-ce
Q psy2107         283 WTAVD-EIIT-SSWDHTLKIWDAELGGMKS-------EIVGNKSFFDVHYSPLSKLVITASA-DKQIRLYDPKVKEG-AI  351 (391)
Q Consensus       283 ~~~~~-~l~s-~~~dg~i~iwd~~~~~~~~-------~~~~~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~-~~  351 (391)
                      ++|++ .+++ ...++.|.+||+.+...+.       ..........++|+|+|++++++.. ++.|.+|++....+ ..
T Consensus       133 ~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~  212 (330)
T PRK11028        133 IDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIE  212 (330)
T ss_pred             eCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEE
Confidence            88765 4544 4567999999997633221       1222345678999999999988776 89999999874211 11


Q ss_pred             EEEEecc------ccCcEEEEEECCCCCCEEEEe-eCCCcEEEEec
Q psy2107         352 VKSTFSS------HKEWVQSVRWSPIDPQLFVSA-SFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~------h~~~v~~~~~~~~~~~~l~s~-~~dg~v~iwdl  390 (391)
                      ....+..      +......+.++|++ ++++++ ..++.|.+|++
T Consensus       213 ~~~~~~~~p~~~~~~~~~~~i~~~pdg-~~lyv~~~~~~~I~v~~i  257 (330)
T PRK11028        213 CVQTLDMMPADFSDTRWAADIHITPDG-RHLYACDRTASLISVFSV  257 (330)
T ss_pred             EEEEEecCCCcCCCCccceeEEECCCC-CEEEEecCCCCeEEEEEE
Confidence            2223221      11234468999955 455555 45789999986

>KOG1538|consensus

Probab=99.71  E-value=7.4e-16  Score=134.60  Aligned_cols=224  Identities=17%  Similarity=0.280  Sum_probs=163.0

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .|..++|.  |..|+.+.. ..+.+||. ++..+.++++|...|+|++|   +.+|..+++|+.|..|.+|.-.     .
T Consensus        14 ci~d~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAy---s~dGkrFASG~aDK~VI~W~~k-----l   84 (1081)
T KOG1538|consen   14 CINDIAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAY---AKDGKRFASGSADKSVIIWTSK-----L   84 (1081)
T ss_pred             chheeEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEE---ccCCceeccCCCceeEEEeccc-----c
Confidence            78888887  555544443 47999999 78889999999999999999   8899999999999999999732     2


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      +-+..+ .|.+.|.|+.|+|-...|++++-. ..-+|..+...                              +... ..
T Consensus        85 EG~LkY-SH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~------------------------------V~K~-ks  131 (1081)
T KOG1538|consen   85 EGILKY-SHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKS------------------------------VSKH-KS  131 (1081)
T ss_pred             cceeee-ccCCeeeEeecCchHHHhhhcchh-hccccChhhhh------------------------------HHhh-hh
Confidence            222333 599999999999998889988764 35678765311                              1111 12


Q ss_pred             cCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEEC----CeeeEEEEECCCC-----CEEEEeeCCCcEEEEcC
Q psy2107         275 KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYSPLS-----KLVITASADKQIRLYDP  344 (391)
Q Consensus       275 ~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~i~~~~~~p~~-----~~l~~g~~dg~i~iwd~  344 (391)
                      ...+.+.+|. ++.+++.|-.+|+|.+-+- +++....+..    +.+|++++|+|..     ..+++.....++.+|.+
T Consensus       132 s~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~L  210 (1081)
T KOG1538|consen  132 SSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQL  210 (1081)
T ss_pred             heeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEe
Confidence            4567788898 4556889999999999863 4554444443    3489999999963     47788888888888876


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .. +   .+..-+.-.-...|+.+.| ++.++..||.|+.+++|-
T Consensus       211 sG-~---~Igk~r~L~FdP~CisYf~-NGEy~LiGGsdk~L~~fT  250 (1081)
T KOG1538|consen  211 SG-K---QIGKDRALNFDPCCISYFT-NGEYILLGGSDKQLSLFT  250 (1081)
T ss_pred             cc-e---eecccccCCCCchhheecc-CCcEEEEccCCCceEEEe
Confidence            43 2   2222222233457888889 666788888899988873

>KOG1963|consensus

Probab=99.71  E-value=1.1e-14  Score=131.12  Aligned_cols=163  Identities=18%  Similarity=0.237  Sum_probs=128.2

Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV  281 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  281 (391)
                      .|...++|.+++|+++++++|..||.|.+|.--..+                         ........+.-|...|.++
T Consensus       203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~-------------------------~~~~t~t~lHWH~~~V~~L  257 (792)
T KOG1963|consen  203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSS-------------------------DDSETCTLLHWHHDEVNSL  257 (792)
T ss_pred             hhcccceeEEeccccceEEEeccCCcEEEEeccccc-------------------------cccccceEEEeccccccee
Confidence            466678999999999999999999999999753211                         1122445677799999999


Q ss_pred             Eec-cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec---
Q psy2107         282 QWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS---  357 (391)
Q Consensus       282 ~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---  357 (391)
                      +|+ ++.+|++|+..|.+.+|.+.+++...-.+..++|..+.++||+.+.+....|+.|.+....+..-...+..+.   
T Consensus       258 ~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~  337 (792)
T KOG1963|consen  258 SFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPT  337 (792)
T ss_pred             EEecCCceEeecccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCC
Confidence            999 5567999999999999999999965555677899999999999999999999999999875433211111111   


Q ss_pred             -----cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         358 -----SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       358 -----~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                           ...+-.+.++++| ..+.++-.+..|.|.+||+
T Consensus       338 ~~~k~~~~~l~t~~~idp-r~~~~vln~~~g~vQ~ydl  374 (792)
T KOG1963|consen  338 PSTKTRPQSLTTGVSIDP-RTNSLVLNGHPGHVQFYDL  374 (792)
T ss_pred             ccccccccccceeEEEcC-CCCceeecCCCceEEEEec
Confidence                 1245578889999 6667888999999999986

>KOG1240|consensus

Probab=99.70  E-value=2.5e-15  Score=139.68  Aligned_cols=223  Identities=18%  Similarity=0.248  Sum_probs=162.2

Q ss_pred             EcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC---CceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         141 WTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES---NSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       141 wd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      |+.+|..+..+..|...+..++.+  ++++.+|++|+.||+|++|+.+.-.   ...+...++..-...+.++...+++.
T Consensus      1034 W~p~G~lVAhL~Ehs~~v~k~a~s--~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~ 1111 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVS--SEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGD 1111 (1431)
T ss_pred             CCccceEeehhhhccccccceeec--CCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCC
Confidence            888899999999999999998885  3356899999999999999976332   23344455554577899999999999


Q ss_pred             EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee--cCccCcccEEEec--cCC-eEEEE
Q psy2107         218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL--KGHKEAISAVQWT--AVD-EIITS  292 (391)
Q Consensus       218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~--~~~-~l~s~  292 (391)
                      .+|.|+.||.|.+.+++......                      .........  +.....|.+-+|.  ... .++.+
T Consensus      1112 ~~Av~t~DG~v~~~~id~~~~~~----------------------~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~ 1169 (1431)
T KOG1240|consen 1112 QFAVSTKDGSVRVLRIDHYNVSK----------------------RVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYA 1169 (1431)
T ss_pred             eEEEEcCCCeEEEEEcccccccc----------------------ceeeeeecccccCCCceEEeecccccccceeEEEE
Confidence            99999999999999997521110                      000011111  1112223333444  223 57888


Q ss_pred             ECCCeEEEEecccCceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe-ccccCcEEEEEE
Q psy2107         293 SWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF-SSHKEWVQSVRW  368 (391)
Q Consensus       293 ~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~  368 (391)
                      ..-+.|..||+++.....+++   .|+.|++++.+|.+.++++|+..|.+.+||++-+.   ++..+ .++..+++.+..
T Consensus      1170 T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~---~i~sw~~P~~~~i~~v~~ 1246 (1431)
T KOG1240|consen 1170 TDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRV---PILSWEHPARAPIRHVWL 1246 (1431)
T ss_pred             EeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCc---eeecccCcccCCcceEEe
Confidence            889999999999877666554   35689999999999999999999999999998754   33332 345688999998


Q ss_pred             CCCCC--CEEEEee--CCCcEEEEec
Q psy2107         369 SPIDP--QLFVSAS--FDNSVKLWDL  390 (391)
Q Consensus       369 ~~~~~--~~l~s~~--~dg~v~iwdl  390 (391)
                      +|..+  ...++++  ..+.|.+|++
T Consensus      1247 ~~~~~~~S~~vs~~~~~~nevs~wn~ 1272 (1431)
T KOG1240|consen 1247 CPTYPQESVSVSAGSSSNNEVSTWNM 1272 (1431)
T ss_pred             eccCCCCceEEEecccCCCceeeeec
Confidence            88544  4455554  4678999986

>KOG1963|consensus

Probab=99.70  E-value=4.4e-14  Score=127.32  Aligned_cols=290  Identities=18%  Similarity=0.258  Sum_probs=168.1

Q ss_pred             ccceEEEEEEeccC--CCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-----CCceEEeccCCCCCeeEEE
Q psy2107          92 SENVIDVEYLESTP--TPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-----RGEHKLNIPGHGGPVKGVA  162 (391)
Q Consensus        92 ~~~~~~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-----~~~~~~~~~~~~~~v~~l~  162 (391)
                      .+..+.+|+.+...  ......-..|.-.++|.+++  ++++|+|..||.|.+|.-     .......+.=|...|.+++
T Consensus       179 ~~~~~~~~~v~~~~~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~  258 (792)
T KOG1963|consen  179 HMCKIHIYFVPKHTKHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLS  258 (792)
T ss_pred             EeeeEEEEEecccceeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeE
Confidence            34445555554422  11122334588888999988  779999999999999954     2345556777999999999


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP  242 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~  242 (391)
                      |   +.+|.+|++|+..|.+.+|.+.++.  .+.   +..-.++|..+.++|++.+.+....|+.|.+....+.......
T Consensus       259 f---S~~G~~LlSGG~E~VLv~Wq~~T~~--kqf---LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tI  330 (792)
T KOG1963|consen  259 F---SSDGAYLLSGGREGVLVLWQLETGK--KQF---LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTI  330 (792)
T ss_pred             E---ecCCceEeecccceEEEEEeecCCC--ccc---ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhc
Confidence            9   7789999999999999999965333  222   3345789999999999999999999999999887543322111


Q ss_pred             CCCCCCCcccccccc---ccccCCCCCceeeecCccCcc-----------cEEEe-----ccCC----------------
Q psy2107         243 SENGDEGTTSKKRKK---EYSSASSRTPLITLKGHKEAI-----------SAVQW-----TAVD----------------  287 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v-----------~~~~~-----~~~~----------------  287 (391)
                      +...........+..   ......++.....+.+|.+.|           ..+..     +++.                
T Consensus       331 sgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~g  410 (792)
T KOG1963|consen  331 SGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFG  410 (792)
T ss_pred             cCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccc
Confidence            100000000000000   000111112222333333322           11111     1111                


Q ss_pred             -eEEEE--------ECC--CeEEEEecccCc----eeEEEEC-C-eeeEEEEE-CCCC-CEEEEeeCCCcEEEEcCCCCC
Q psy2107         288 -EIITS--------SWD--HTLKIWDAELGG----MKSEIVG-N-KSFFDVHY-SPLS-KLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       288 -~l~s~--------~~d--g~i~iwd~~~~~----~~~~~~~-~-~~i~~~~~-~p~~-~~l~~g~~dg~i~iwd~~~~~  348 (391)
                       .+++.        ..|  -.+++|-.....    +...+.. | ..+...++ ++.. ...++++.||.++||-+...+
T Consensus       411 s~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~  490 (792)
T KOG1963|consen  411 SWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDS  490 (792)
T ss_pred             eEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEeccc
Confidence             11111        011  134445332221    1111111 1 22333333 3333 388899999999999873221


Q ss_pred             -------cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         349 -------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       349 -------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                             ...+...-.-|..++++++|+. +|. +++++.|++|.+||.+
T Consensus       491 n~~k~~s~W~c~~i~sy~k~~i~a~~fs~-dGs-lla~s~~~~Itiwd~~  538 (792)
T KOG1963|consen  491 NIYKKSSNWTCKAIGSYHKTPITALCFSQ-DGS-LLAVSFDDTITIWDYD  538 (792)
T ss_pred             ccCcCccceEEeeeeccccCcccchhhcC-CCc-EEEEecCCEEEEecCC
Confidence                   1223333334889999999999 444 7778889999999963

>KOG2139|consensus

Probab=99.70  E-value=5.5e-15  Score=120.08  Aligned_cols=230  Identities=15%  Similarity=0.263  Sum_probs=152.3

Q ss_pred             cEEEEEecCC--EEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         118 WVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       118 ~V~~~~~~~~--~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .+..++|+..  .++++..|-.|++||-+......++ .....|+|++|-|.+  +..|+.|+.. .|++|..+...+..
T Consensus       100 dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPls--aselavgCr~-gIciW~~s~tln~~  176 (445)
T KOG2139|consen  100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLS--ASELAVGCRA-GICIWSDSRTLNAN  176 (445)
T ss_pred             ceeeEeechhhhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCC--cceeeeeecc-eeEEEEcCcccccc
Confidence            4567788754  6788999999999998654444444 234679999997763  3467777754 58999754322221


Q ss_pred             e----------EEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         195 E----------CIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       195 ~----------~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      .          .+....+| .+|++|.|+++|..+++++. |..|.|||.+++...                        
T Consensus       177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~------------------------  231 (445)
T KOG2139|consen  177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKI------------------------  231 (445)
T ss_pred             cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcc------------------------
Confidence            1          12233455 68999999999999999875 678999999885542                        


Q ss_pred             CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc-cCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE-LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                         ++.  ...-+.++-+.|+|++ .|++++-|+..++|... +.....-.-+.+.|...+|+|+|++|+... .|.-++
T Consensus       232 ---pL~--~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspcGsfLLf~~-sgsp~l  305 (445)
T KOG2139|consen  232 ---PLI--PKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPCGSFLLFAC-SGSPRL  305 (445)
T ss_pred             ---ccc--ccCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCCCCEEEEEE-cCCceE
Confidence               222  2234668899999765 58999999999999544 444444555666899999999999776554 233445


Q ss_pred             EcCCCCCc------------ceEEEEec------c---ccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         342 YDPKVKEG------------AIVKSTFS------S---HKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       342 wd~~~~~~------------~~~~~~~~------~---h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      |.+.....            ..++..+.      +   -.+++.+++|.|. +.+||..-..
T Consensus       306 ysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDps-GeyLav~fKg  366 (445)
T KOG2139|consen  306 YSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPS-GEYLAVIFKG  366 (445)
T ss_pred             EEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCC-CCEEEEEEcC
Confidence            54432111            01111111      1   1457899999994 4556665443

>KOG1524|consensus

Probab=99.69  E-value=9.5e-16  Score=130.58  Aligned_cols=227  Identities=15%  Similarity=0.172  Sum_probs=154.9

Q ss_pred             CCCCcEEEEEecC-CEEEEEECCCeEEEE-cCCCceEEeccCCCCCeeEEEE-Eec----CCCCeEEEEEeCCCcEEEEe
Q psy2107         114 LHDDWVSAIDFHN-DWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAW-LYN----DGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       114 ~h~~~V~~~~~~~-~~l~t~~~dg~i~iw-d~~~~~~~~~~~~~~~v~~l~~-~~~----~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .|...|.|+.+.+ ..++.++.|..+.+| |+.........-...-+....+ -|.    ......|+.++.||.+.+.+
T Consensus        12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~   91 (737)
T KOG1524|consen   12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN   91 (737)
T ss_pred             ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence            4777788888874 456666666666666 4433222211111111111111 111    11334788899999999886


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                           ...+.......|.+.+.|-.|+|+|.-|+++++||.|++|.-..                              .
T Consensus        92 -----k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG------------------------------M  136 (737)
T KOG1524|consen   92 -----KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG------------------------------M  136 (737)
T ss_pred             -----ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc------------------------------h
Confidence                 23345566778999999999999999999999999999998532                              2


Q ss_pred             ceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ...++.....+|.|++|.|+..-+.=+..+.+.|=-+.....+...+.| +-|.++.|++..+.+++|+.|-..+|||-.
T Consensus       137 LRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~  216 (737)
T KOG1524|consen  137 LRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ  216 (737)
T ss_pred             HHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc
Confidence            2233444577899999997655333344566666666655444455544 478999999999999999999999999964


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      ..    .+..-..|..+|++++|.| + ..++.+|.
T Consensus       217 G~----~Lf~S~~~ey~ITSva~np-d-~~~~v~S~  246 (737)
T KOG1524|consen  217 GA----NLFTSAAEEYAITSVAFNP-E-KDYLLWSY  246 (737)
T ss_pred             Cc----ccccCChhccceeeeeecc-c-cceeeeee
Confidence            32    4556678999999999999 4 45666664

>KOG2110|consensus

Probab=99.69  E-value=1.2e-13  Score=112.69  Aligned_cols=226  Identities=18%  Similarity=0.228  Sum_probs=151.3

Q ss_pred             cEEEEEecCC--EEEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCC
Q psy2107         118 WVSAIDFHND--WILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESN  192 (391)
Q Consensus       118 ~V~~~~~~~~--~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~  192 (391)
                      .+..+.|+.+  .|..|+.|| .++|+.+. .+..........|-.+-|   +  ..++|..+.+.  .+++.++.  ..
T Consensus         7 ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLF---S--SSLvaiV~~~qpr~Lkv~~~K--k~   78 (391)
T KOG2110|consen    7 TINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLF---S--SSLVAIVSIKQPRKLKVVHFK--KK   78 (391)
T ss_pred             ceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeec---c--cceeEEEecCCCceEEEEEcc--cC
Confidence            5666678844  778888887 57777632 222222223334555556   2  33555555543  47888743  22


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ..-|-..   ...+|.++.++.+  .|++.=.+ .|+|||+++-+                             .+.++.
T Consensus        79 ~~ICe~~---fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~Mk-----------------------------lLhTI~  123 (391)
T KOG2110|consen   79 TTICEIF---FPTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMK-----------------------------LLHTIE  123 (391)
T ss_pred             ceEEEEe---cCCceEEEEEccc--eEEEEEcc-cEEEEecccce-----------------------------eehhhh
Confidence            2222222   3567999999764  45555554 49999998744                             333333


Q ss_pred             ---CccCcccEEEeccCC-eEEE--EECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCc-EEEEcC
Q psy2107         273 ---GHKEAISAVQWTAVD-EIIT--SSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQ-IRLYDP  344 (391)
Q Consensus       273 ---~~~~~v~~~~~~~~~-~l~s--~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~-i~iwd~  344 (391)
                         .+...+.++++++.+ +++-  ....|.|.+||+.+-+....+..|. ++-+++|+++|.+||++++.|+ ||||.+
T Consensus       124 t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v  203 (391)
T KOG2110|consen  124 TTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSV  203 (391)
T ss_pred             ccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEc
Confidence               344445555555333 4443  2346899999999999999998776 8999999999999999999885 799998


Q ss_pred             CCCCcceEEEEeccc--cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         345 KVKEGAIVKSTFSSH--KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..++   .+..++.-  ...|.+++|+| +..+|++.|..++|+||.|
T Consensus       204 ~~G~---kl~eFRRG~~~~~IySL~Fs~-ds~~L~~sS~TeTVHiFKL  247 (391)
T KOG2110|consen  204 PEGQ---KLYEFRRGTYPVSIYSLSFSP-DSQFLAASSNTETVHIFKL  247 (391)
T ss_pred             CCcc---EeeeeeCCceeeEEEEEEECC-CCCeEEEecCCCeEEEEEe
Confidence            7765   44444322  34689999999 6678999999999999976

>KOG3881|consensus

Probab=99.68  E-value=1.1e-14  Score=119.47  Aligned_cols=248  Identities=15%  Similarity=0.200  Sum_probs=169.8

Q ss_pred             CCCcEEEEEec--C--CEEEEEECCCeEEEEcCCCceE-E------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         115 HDDWVSAIDFH--N--DWILTGCYDHSVHIWTRRGEHK-L------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       115 h~~~V~~~~~~--~--~~l~t~~~dg~i~iwd~~~~~~-~------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      -...|+.++|.  +  +.+...+.|..+..+......+ .      ......++|..++.     ....|++|-.+|.+.
T Consensus        54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~-----~dg~Litc~~sG~l~  128 (412)
T KOG3881|consen   54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKL-----ADGTLITCVSSGNLQ  128 (412)
T ss_pred             hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhh-----cCCEEEEEecCCcEE
Confidence            45577778885  2  2555554666676666532211 1      22344566777765     345788899999999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-EEEEEeCC--CcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-QFATGGWD--CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      +|...........+..+..+ .++..|.-++... .+++||..  ..+++||+++.+++......               
T Consensus       129 ~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNv---------------  192 (412)
T KOG3881|consen  129 VRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNV---------------  192 (412)
T ss_pred             EEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCC---------------
Confidence            99865333223344444443 4566666666554 45568988  88999999875432110000               


Q ss_pred             cCCCCCceeeecCccCcccEEEecc---CCeEEEEECCCeEEEEecccCc-eeEEEEC-CeeeEEEEECCCCCEEEEeeC
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKIWDAELGG-MKSEIVG-NKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~-~~~i~~~~~~p~~~~l~~g~~  335 (391)
                        . ...+ .+ .-.-+++.+.|.+   ...|++++.-+.+|+||.+.++ ++..+.. ..+++++...|.++++++|..
T Consensus       193 --p-nD~L-~L-rVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~  267 (412)
T KOG3881|consen  193 --P-NDRL-GL-RVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNT  267 (412)
T ss_pred             --C-Cccc-cc-eeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecc
Confidence              0 0000 00 0123467788874   4569999999999999998654 5555554 458999999999999999999


Q ss_pred             CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      -+.+..||++.+.  .+...+.+-.+.|+++..+| ...++++||-|..|||+|++
T Consensus       268 ~g~l~~FD~r~~k--l~g~~~kg~tGsirsih~hp-~~~~las~GLDRyvRIhD~k  320 (412)
T KOG3881|consen  268 KGQLAKFDLRGGK--LLGCGLKGITGSIRSIHCHP-THPVLASCGLDRYVRIHDIK  320 (412)
T ss_pred             cchhheecccCce--eeccccCCccCCcceEEEcC-CCceEEeeccceeEEEeecc
Confidence            9999999998754  33445888999999999999 76799999999999999974

>KOG0642|consensus

Probab=99.68  E-value=7.9e-16  Score=131.76  Aligned_cols=217  Identities=18%  Similarity=0.264  Sum_probs=147.5

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec----CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK----VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      ++..|...|+++.|   .+....|++++.||.+.+|++.    ......+++.+|.+|.++|.|+++.+++.++++|+-|
T Consensus       289 tl~s~~d~ir~l~~---~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~D  365 (577)
T KOG0642|consen  289 TLRSHDDCIRALAF---HPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGID  365 (577)
T ss_pred             eeecchhhhhhhhc---CCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccC
Confidence            45578888999999   4455579999999999999982    1234567899999999999999999999999999999


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecc
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~  304 (391)
                      |+|+.|++.. ....                  +...........+.||.+.|+.+++++ ..+|++++.||++++|+..
T Consensus       366 g~I~~w~~p~-n~dp------------------~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~  426 (577)
T KOG0642|consen  366 GTIRCWNLPP-NQDP------------------DDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPT  426 (577)
T ss_pred             ceeeeeccCC-CCCc------------------ccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccC
Confidence            9999998752 1100                  001112234557889999999999994 4569999999999999987


Q ss_pred             cCceeEEEEC---CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEecc-----ccCcEEEEEECCCCCCE
Q psy2107         305 LGGMKSEIVG---NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSS-----HKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       305 ~~~~~~~~~~---~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~  375 (391)
                      .... .++..   +.-...+.+-.... ..++...-+.--+++....... .+.....     ....++-+.++| +..+
T Consensus       427 ~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~-~~~~s~~~~~~~~~~~in~vVs~~-~~~~  503 (577)
T KOG0642|consen  427 EESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDL-LIFESSASPGPRRYPQINKVVSHP-TADI  503 (577)
T ss_pred             CcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhhe-eeccccCCCcccccCccceEEecC-CCCe
Confidence            6665 33322   23344555543321 2222222233333333332211 1111111     123578888999 5568


Q ss_pred             EEEeeCCCcEEEEecC
Q psy2107         376 FVSASFDNSVKLWDLR  391 (391)
Q Consensus       376 l~s~~~dg~v~iwdlr  391 (391)
                      .+++..|+.|+++|.+
T Consensus       504 ~~~~hed~~Ir~~dn~  519 (577)
T KOG0642|consen  504 TFTAHEDRSIRFFDNK  519 (577)
T ss_pred             eEecccCCceeccccc
Confidence            9999999999999853

>KOG2111|consensus

Probab=99.67  E-value=3.8e-13  Score=107.71  Aligned_cols=174  Identities=17%  Similarity=0.289  Sum_probs=127.1

Q ss_pred             CeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec--CCCCeEEEEE
Q psy2107         136 HSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG--HERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~--~~~~v~~l~~  212 (391)
                      +.+.|||- ....+..+ ....+|.+|.+   +++  .+++.- .+.|.+|.+...   .+.++.+..  ......+++-
T Consensus        75 NkviIWDD~k~~~i~el-~f~~~I~~V~l---~r~--riVvvl-~~~I~VytF~~n---~k~l~~~et~~NPkGlC~~~~  144 (346)
T KOG2111|consen   75 NKVIIWDDLKERCIIEL-SFNSEIKAVKL---RRD--RIVVVL-ENKIYVYTFPDN---PKLLHVIETRSNPKGLCSLCP  144 (346)
T ss_pred             ceEEEEecccCcEEEEE-EeccceeeEEE---cCC--eEEEEe-cCeEEEEEcCCC---hhheeeeecccCCCceEeecC
Confidence            47999985 44444444 46788999999   333  455544 678999986422   233333332  1233445444


Q ss_pred             cCCCCEEEE-EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEE
Q psy2107         213 SESRQQFAT-GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEII  290 (391)
Q Consensus       213 ~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~  290 (391)
                      +.+..+||. |-.-|.|+|-|+...+.                           .+-..+..|.+.|.|++.+ ++..++
T Consensus       145 ~~~k~~LafPg~k~GqvQi~dL~~~~~---------------------------~~p~~I~AH~s~Iacv~Ln~~Gt~vA  197 (346)
T KOG2111|consen  145 TSNKSLLAFPGFKTGQVQIVDLASTKP---------------------------NAPSIINAHDSDIACVALNLQGTLVA  197 (346)
T ss_pred             CCCceEEEcCCCccceEEEEEhhhcCc---------------------------CCceEEEcccCceeEEEEcCCccEEE
Confidence            445555554 34569999999965332                           1345778999999999999 666799


Q ss_pred             EEECCCe-EEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         291 TSSWDHT-LKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       291 s~~~dg~-i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ++|..|+ |||||..+|..+.+++..   ..|.+++|||++.+||++|+.|+++||.++.
T Consensus       198 TaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~  257 (346)
T KOG2111|consen  198 TASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD  257 (346)
T ss_pred             EeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence            9999887 899999999999998753   4899999999999999999999999998875

>KOG1272|consensus

Probab=99.67  E-value=2e-16  Score=132.28  Aligned_cols=223  Identities=12%  Similarity=0.204  Sum_probs=171.4

Q ss_pred             EEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107         121 AIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       121 ~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      .+.|.  |..++.|+.-|.|-.+|..+..+..-..-...|.++.|+.+   .. +++......+.|||     +.+..++
T Consensus       134 ~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~Etv~Dv~~LHn---eq-~~AVAQK~y~yvYD-----~~GtElH  204 (545)
T KOG1272|consen  134 HLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVMETVRDVTFLHN---EQ-FFAVAQKKYVYVYD-----NNGTELH  204 (545)
T ss_pred             eeeecCCccEEEecCCccceeeeecccceeeeeeehhhhhhhhhhhcc---hH-HHHhhhhceEEEec-----CCCcEEe
Confidence            44554  88999999999999999977776665566788999999653   33 44456678899998     3445566


Q ss_pred             EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcc
Q psy2107         199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAI  278 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  278 (391)
                      .+..| ..|..+.|-|..-+|++++..|.++.-|+.+++                             .+..+....+.+
T Consensus       205 Clk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~Gk-----------------------------lVa~~~t~~G~~  254 (545)
T KOG1272|consen  205 CLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGK-----------------------------LVASIRTGAGRT  254 (545)
T ss_pred             ehhhc-CchhhhcccchhheeeecccCCceEEEeechhh-----------------------------hhHHHHccCCcc
Confidence            66654 478999999999899999999999999998855                             444555566777


Q ss_pred             cEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe
Q psy2107         279 SAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF  356 (391)
Q Consensus       279 ~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~  356 (391)
                      ..++-+|-+- +-+|...|+|.+|...+..++..+.+| ++|.++++.++|+|++|.+.|..++|||++...   ....+
T Consensus       255 ~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~---ql~t~  331 (545)
T KOG1272|consen  255 DVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFY---QLHTY  331 (545)
T ss_pred             chhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccc---cccee
Confidence            7888786554 678888999999999988887776665 499999999999999999999999999998754   22222


Q ss_pred             ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         357 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       357 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .. ..+...+++|. .+  ++++|....|.||.
T Consensus       332 ~t-p~~a~~ls~Sq-kg--lLA~~~G~~v~iw~  360 (545)
T KOG1272|consen  332 RT-PHPASNLSLSQ-KG--LLALSYGDHVQIWK  360 (545)
T ss_pred             ec-CCCcccccccc-cc--ceeeecCCeeeeeh
Confidence            22 34578888986 44  44555666889883

>KOG4227|consensus

Probab=99.66  E-value=2.1e-15  Score=123.78  Aligned_cols=171  Identities=16%  Similarity=0.223  Sum_probs=139.5

Q ss_pred             EEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccC
Q psy2107         198 HVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKE  276 (391)
Q Consensus       198 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  276 (391)
                      +.+.+|.+.|.++.|+.++++|++|+.|..+++|+++..-.                       ....+++.... .|.+
T Consensus        50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~-----------------------~k~~KPI~~~~~~H~S  106 (609)
T KOG4227|consen   50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMV-----------------------RKTPKPIGVMEHPHRS  106 (609)
T ss_pred             hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHh-----------------------hcCCCCceeccCcccc
Confidence            44568999999999999999999999999999999864221                       11234555444 4568


Q ss_pred             cccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         277 AISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       277 ~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      .|.|++|. .+..+++|..+++|...|+.+.+.+..+....   .|..+..+|..+.+++.+.++.|.+||.+....+..
T Consensus       107 NIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~  186 (609)
T KOG4227|consen  107 NIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPIS  186 (609)
T ss_pred             ceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCc
Confidence            99999999 44569999999999999999999888887765   899999999999999999999999999987653333


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...+........++.|+|..+.+|++.+..+-+.+||+|
T Consensus       187 ~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R  225 (609)
T KOG4227|consen  187 LVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRR  225 (609)
T ss_pred             eeeecCCCccceeeeecCCCceeEEeccccCCCCceeec
Confidence            333333455678889999889999999999999999986

>KOG1409|consensus

Probab=99.65  E-value=1.3e-14  Score=117.17  Aligned_cols=234  Identities=12%  Similarity=0.170  Sum_probs=164.5

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEE--eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKL--NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      ..+.||.+.|++...-  .+-+++.+.|.+++||-- +..+..  .......+++++.+   ..+...|+.|-..|++.-
T Consensus        18 ~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y---~~e~~~L~vg~~ngtvte   94 (404)
T KOG1409|consen   18 SKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEY---VSESRRLYVGQDNGTVTE   94 (404)
T ss_pred             hhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeee---eccceEEEEEEecceEEE
Confidence            4456788888876665  558999999999999954 322222  12234677889998   567788999999999998


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCc---------ccccc
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGT---------TSKKR  255 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------~~~~~  255 (391)
                      +.+...-+.....+....|...+..+-|+.....+++.+.|..+.---.+.+...+..........         .....
T Consensus        95 fs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~  174 (404)
T KOG1409|consen   95 FALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPASALQFDALYAFVGDHS  174 (404)
T ss_pred             EEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCCCCceeeEEEEecccc
Confidence            876544445556677778999999999999999999999998776544555544433211110000         00000


Q ss_pred             cc---ccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCce--eEEEECCeeeEEEEECCCCCE
Q psy2107         256 KK---EYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGM--KSEIVGNKSFFDVHYSPLSKL  329 (391)
Q Consensus       256 ~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~i~~~~~~p~~~~  329 (391)
                      ..   .........++.++.+|...+.+++|.+ ++.+++|..|..+.+||+--.+-  .....++..+..+...+.-+.
T Consensus       175 gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~  254 (404)
T KOG1409|consen  175 GQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQ  254 (404)
T ss_pred             cceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhhee
Confidence            00   1112344567788899999999999995 45699999999999999864432  223334457777877777889


Q ss_pred             EEEeeCCCcEEEEcCCC
Q psy2107         330 VITASADKQIRLYDPKV  346 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~  346 (391)
                      +.+++.||.|.+|+.+.
T Consensus       255 l~S~~edg~i~~w~mn~  271 (404)
T KOG1409|consen  255 LISCGEDGGIVVWNMNV  271 (404)
T ss_pred             eeeccCCCeEEEEeccc
Confidence            99999999999999764

>KOG0644|consensus

Probab=99.65  E-value=1.3e-15  Score=136.10  Aligned_cols=283  Identities=17%  Similarity=0.223  Sum_probs=191.1

Q ss_pred             cchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEE
Q psy2107          43 VPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAI  122 (391)
Q Consensus        43 ~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~  122 (391)
                      -.+--+++..|+..-.. .    .+-.|--.|..+.+          .+.+..+++|..+  .......+.||.+.|+.+
T Consensus       176 mvqkmk~ikrLlgH~na-V----yca~fDrtg~~Iit----------gsdd~lvKiwS~e--t~~~lAs~rGhs~ditdl  238 (1113)
T KOG0644|consen  176 MVQKMKNIKRLLGHRNA-V----YCAIFDRTGRYIIT----------GSDDRLVKIWSME--TARCLASCRGHSGDITDL  238 (1113)
T ss_pred             HHHHHHHHHHHHhhhhh-e----eeeeeccccceEee----------cCccceeeeeecc--chhhhccCCCCccccchh
Confidence            33445556666655321 1    11233344544443          4567788888743  333456788999999999


Q ss_pred             Eec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE
Q psy2107         123 DFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV  199 (391)
Q Consensus       123 ~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  199 (391)
                      +.+  .-++++++.|..|++|.+ .+..+..+.+|.+.|++++|+|.       .+.+.||++++||++.......+.-.
T Consensus       239 avs~~n~~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~-------~sss~dgt~~~wd~r~~~~~y~prp~  311 (1113)
T KOG0644|consen  239 AVSSNNTMIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPR-------ASSSDDGTCRIWDARLEPRIYVPRPL  311 (1113)
T ss_pred             ccchhhhhhhhcccCceEEEEecCCCchHHHHhccccceeeeccCcc-------ccCCCCCceEeccccccccccCCCCC
Confidence            998  448999999999999999 67788889999999999999553       37788999999997622111110000


Q ss_pred             EecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCccc
Q psy2107         200 CRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS  279 (391)
Q Consensus       200 ~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  279 (391)
                      -......+.++.|..++.-+++|+.|+.-..|.+....                                   .+...+.
T Consensus       312 ~~~~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~-----------------------------------~~~~~li  356 (1113)
T KOG0644|consen  312 KFTEKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLA-----------------------------------WRSNLLI  356 (1113)
T ss_pred             CcccccceeeeeccccccccccccCCcccccchhhHhh-----------------------------------hhccceE
Confidence            01123567778888888889999999998888764311                                   1111111


Q ss_pred             EEEec--cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCE-EEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107         280 AVQWT--AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKL-VITASADKQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       280 ~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~-l~~g~~dg~i~iwd~~~~~~~~~~~~  355 (391)
                      .+.++  -+...+++-.+..+.+|++.+|.......++. .+..+.++|-+.. ..+++.||...|||+-.+.  .....
T Consensus       357 f~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~--pik~y  434 (1113)
T KOG0644|consen  357 FVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGI--PIKHY  434 (1113)
T ss_pred             EEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCC--cceee
Confidence            12222  12346677778899999999999888877766 7888999997664 4578899999999986644  23333


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ..+| ..+...+||+ ++..++....-|.+.|.
T Consensus       435 ~~gh-~kl~d~kFSq-dgts~~lsd~hgql~i~  465 (1113)
T KOG0644|consen  435 FIGH-GKLVDGKFSQ-DGTSIALSDDHGQLYIL  465 (1113)
T ss_pred             eccc-ceeeccccCC-CCceEecCCCCCceEEe
Confidence            4555 4566778999 44556666666777665

>KOG1334|consensus

Probab=99.64  E-value=6.5e-15  Score=124.08  Aligned_cols=288  Identities=19%  Similarity=0.272  Sum_probs=200.2

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---C-CEEEEEECCCeEEEEc
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH---N-DWILTGCYDHSVHIWT  142 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---~-~~l~t~~~dg~i~iwd  142 (391)
                      +..|+..|..+++          .+.+..+-+|......+. ....-+|...|..-.|-   + ..+++++.||.+++=.
T Consensus       147 tV~FN~~Gd~l~S----------gSDD~~vv~WdW~~~~~~-l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~  215 (559)
T KOG1334|consen  147 TVHFNQRGDVLAS----------GSDDLQVVVWDWVSGSPK-LSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSE  215 (559)
T ss_pred             eeeecccCceeec----------cCccceEEeehhhccCcc-cccccccccchhhhhccCCCCCcCceeccccCceeeee
Confidence            3456666655554          356667777766554443 33445798888887774   3 4899999999999987


Q ss_pred             C--CCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC---CeEEEEEcCC
Q psy2107         143 R--RGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER---GLETVTVSES  215 (391)
Q Consensus       143 ~--~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~  215 (391)
                      +  ++..  ...+..|.++|..++..|.++  ..|.+++.|+.+.-+|++......... .-..+..   ....++.+|.
T Consensus       216 i~~t~~~e~t~rl~~h~g~vhklav~p~sp--~~f~S~geD~~v~~~Dlr~~~pa~~~~-cr~~~~~~~v~L~~Ia~~P~  292 (559)
T KOG1334|consen  216 ILETGYVENTKRLAPHEGPVHKLAVEPDSP--KPFLSCGEDAVVFHIDLRQDVPAEKFV-CREADEKERVGLYTIAVDPR  292 (559)
T ss_pred             eccccceecceecccccCccceeeecCCCC--CcccccccccceeeeeeccCCccceee-eeccCCccceeeeeEecCCC
Confidence            6  3332  345678999999999988754  469999999999999987544332222 2223333   5678888985


Q ss_pred             CC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEE
Q psy2107         216 RQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSS  293 (391)
Q Consensus       216 ~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~  293 (391)
                      .. .+++|+.|-.+++||.+.-.....-   +              ......+-.........|++++|+ ..+.++++-
T Consensus       293 nt~~faVgG~dqf~RvYD~R~~~~e~~n---~--------------~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSY  355 (559)
T KOG1334|consen  293 NTNEFAVGGSDQFARVYDQRRIDKEENN---G--------------VLDKFCPHHLVEDDPVNITGLVYSHDGSELLASY  355 (559)
T ss_pred             CccccccCChhhhhhhhcccchhhcccc---c--------------hhhhcCCccccccCcccceeEEecCCccceeeee
Confidence            54 7999999999999998753321100   0              000111112222334569999999 777788888


Q ss_pred             CCCeEEEEeccc--C----------ceeE-EEECCe---eeEEEE-ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe
Q psy2107         294 WDHTLKIWDAEL--G----------GMKS-EIVGNK---SFFDVH-YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF  356 (391)
Q Consensus       294 ~dg~i~iwd~~~--~----------~~~~-~~~~~~---~i~~~~-~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~  356 (391)
                      .|-.|+++.-..  |          .... .+++|.   .|..+- |-|...|+++|++-|.|.||+-.+.+   ++..+
T Consensus       356 nDe~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~e---ii~~M  432 (559)
T KOG1334|consen  356 NDEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGE---IIRFM  432 (559)
T ss_pred             cccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhH---HHHHh
Confidence            999999995432  2          1122 245554   455555 46788999999999999999977665   66677


Q ss_pred             ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         357 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       357 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .+-...|+||.=+|.. -+|||+|-|..|+||-
T Consensus       433 egDr~VVNCLEpHP~~-PvLAsSGid~DVKIWT  464 (559)
T KOG1334|consen  433 EGDRHVVNCLEPHPHL-PVLASSGIDHDVKIWT  464 (559)
T ss_pred             hcccceEeccCCCCCC-chhhccCCccceeeec
Confidence            7777799999999955 4799999999999995

>KOG0771|consensus

Probab=99.64  E-value=7.6e-15  Score=121.61  Aligned_cols=195  Identities=15%  Similarity=0.168  Sum_probs=141.7

Q ss_pred             EEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         120 SAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       120 ~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      .+++|+  |..+++|+.||++|||+. +...+.....|.+.|.++.|   ++++.+|++.+.| ..+||+.+..    .+
T Consensus       148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~F---S~dgk~lasig~d-~~~VW~~~~g----~~  219 (398)
T KOG0771|consen  148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDF---SPDGKFLASIGAD-SARVWSVNTG----AA  219 (398)
T ss_pred             eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCcccccee---CCCCcEEEEecCC-ceEEEEeccC----ch
Confidence            456665  679999999999999995 66777788899999999999   8899999999999 8999996532    22


Q ss_pred             EEEE--ecCCCCeEEEEEcCCC-----CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         197 IHVC--RGHERGLETVTVSESR-----QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       197 ~~~~--~~~~~~v~~l~~~~~~-----~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      +...  ..-......+.|+.++     ..++....-+.|+.||+.....                        ...-...
T Consensus       220 ~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~------------------------~~~l~~~  275 (398)
T KOG0771|consen  220 LARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSG------------------------SNFLRLR  275 (398)
T ss_pred             hhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeecc------------------------ccccchh
Confidence            2221  1223356667777766     2333444557777777643221                        0001111


Q ss_pred             eecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC-C-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG-N-KSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~-~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ........|++++.++++. ++.|+.||.|.|++..+.+.++..+. | .-|+.+.|+|+.+++++-+.+..+.|..+..
T Consensus       276 ~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v  355 (398)
T KOG0771|consen  276 KKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV  355 (398)
T ss_pred             hhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence            2222345789999996555 78889999999999998887776653 3 3899999999999999999999999887654

>KOG2139|consensus

Probab=99.62  E-value=6.2e-14  Score=114.08  Aligned_cols=201  Identities=21%  Similarity=0.364  Sum_probs=136.0

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEEC
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESR-QQFATGGWDCLLKIWSA  233 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~  233 (391)
                      -.+..++|   ++.-..++++..|-.|++|+-.  .   .+...++ .....|+|++|-|.+ ..|+.|+.. -|++|..
T Consensus        99 ~dlr~~aW---hqH~~~fava~nddvVriy~ks--s---t~pt~Lks~sQrnvtclawRPlsaselavgCr~-gIciW~~  169 (445)
T KOG2139|consen   99 IDLRGVAW---HQHIIAFAVATNDDVVRIYDKS--S---TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRA-GICIWSD  169 (445)
T ss_pred             cceeeEee---chhhhhhhhhccCcEEEEeccC--C---CCCceecchhhcceeEEEeccCCcceeeeeecc-eeEEEEc
Confidence            45678899   5555678899999999999832  2   2222332 235689999999955 556666665 5999987


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEEC-CCeEEEEecccCceeEE
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSW-DHTLKIWDAELGGMKSE  311 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~~~~~~~~  311 (391)
                      +..........               ........+..-.+| .+|+++.|.+++ .+++++. |..|.|||..++..+..
T Consensus       170 s~tln~~r~~~---------------~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL  233 (445)
T KOG2139|consen  170 SRTLNANRNIR---------------MMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPL  233 (445)
T ss_pred             Ccccccccccc---------------cccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccc
Confidence            64222110000               000111223344455 789999999655 4777765 67899999999887655


Q ss_pred             E-ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         312 I-VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       312 ~-~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      . .+...+.-+.|||||.+|++++-|+..++|+....-   ......--.+.|....|+|.+..+|++++..-.
T Consensus       234 ~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~w---t~erw~lgsgrvqtacWspcGsfLLf~~sgsp~  304 (445)
T KOG2139|consen  234 IPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSW---TKERWILGSGRVQTACWSPCGSFLLFACSGSPR  304 (445)
T ss_pred             cccCCCceeeEEEcCCCCEEEEecccceeeeehhcccc---eecceeccCCceeeeeecCCCCEEEEEEcCCce
Confidence            5 455688899999999999999999999999654321   112222344589999999988777777765433

>KOG1272|consensus

Probab=99.62  E-value=1e-15  Score=128.06  Aligned_cols=226  Identities=14%  Similarity=0.196  Sum_probs=170.4

Q ss_pred             CcEEEEEec-C-CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         117 DWVSAIDFH-N-DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       117 ~~V~~~~~~-~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      ..|.++.|- . .++|++ ....++|||-.+..++.+..| ..|..+.|+|.   .-+|++++..|.++.-|+.    .+
T Consensus       171 Etv~Dv~~LHneq~~AVA-QK~y~yvYD~~GtElHClk~~-~~v~rLeFLPy---HfLL~~~~~~G~L~Y~DVS----~G  241 (545)
T KOG1272|consen  171 ETVRDVTFLHNEQFFAVA-QKKYVYVYDNNGTELHCLKRH-IRVARLEFLPY---HFLLVAASEAGFLKYQDVS----TG  241 (545)
T ss_pred             hhhhhhhhhcchHHHHhh-hhceEEEecCCCcEEeehhhc-Cchhhhcccch---hheeeecccCCceEEEeec----hh
Confidence            467777775 3 355554 557899999999999998876 56889999775   4578899999999999965    44


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      ..+..+....+.+..|+-+|-+..+-+|...|+|.+|....                             ..++..+..|
T Consensus       242 klVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~s-----------------------------kePLvKiLcH  292 (545)
T KOG1272|consen  242 KLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNS-----------------------------KEPLVKILCH  292 (545)
T ss_pred             hhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCC-----------------------------cchHHHHHhc
Confidence            55666666778899999999988999999999999999865                             5678888899


Q ss_pred             cCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107         275 KEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       275 ~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~  353 (391)
                      .++|.++++.++| ++++++.|..++|||+++...+.++..+.+...+++|..| +|| .+....|.||.-.........
T Consensus       293 ~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg-lLA-~~~G~~v~iw~d~~~~s~~~~  370 (545)
T KOG1272|consen  293 RGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG-LLA-LSYGDHVQIWKDALKGSGHGE  370 (545)
T ss_pred             CCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc-cee-eecCCeeeeehhhhcCCCCCC
Confidence            9999999999655 5999999999999999998888888877788889998544 344 345667999963222111111


Q ss_pred             EEeccc--cCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         354 STFSSH--KEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       354 ~~~~~h--~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                      ..+..|  .++|..+.|+| -+.+|..|-..|
T Consensus       371 ~pYm~H~~~~~V~~l~FcP-~EDvLGIGH~~G  401 (545)
T KOG1272|consen  371 TPYMNHRCGGPVEDLRFCP-YEDVLGIGHAGG  401 (545)
T ss_pred             cchhhhccCcccccceecc-HHHeeeccccCC
Confidence            122223  35899999999 444555544433

>KOG2321|consensus

Probab=99.60  E-value=2.1e-14  Score=123.42  Aligned_cols=266  Identities=17%  Similarity=0.258  Sum_probs=181.8

Q ss_pred             eCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEE---
Q psy2107          23 TKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVE---   99 (391)
Q Consensus        23 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~---   99 (391)
                      +.|++|.+..++|  ++.+..+++++|--+.=...+.+.    +.|..+.+.         +.....+..+..+.+.   
T Consensus        60 s~DGqY~lAtG~Y--KP~ikvydlanLSLKFERhlDae~----V~feiLsDD---------~SK~v~L~~DR~IefHak~  124 (703)
T KOG2321|consen   60 SPDGQYLLATGTY--KPQIKVYDLANLSLKFERHLDAEV----VDFEILSDD---------YSKSVFLQNDRTIEFHAKY  124 (703)
T ss_pred             cCCCcEEEEeccc--CCceEEEEcccceeeeeecccccc----eeEEEeccc---------hhhheEeecCceeeehhhc
Confidence            5688999888888  777888888775544433333222    566655554         1111222345544443   


Q ss_pred             ---EEeccCCCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeE
Q psy2107         100 ---YLESTPTPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAA  172 (391)
Q Consensus       100 ---~~~~~~~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~  172 (391)
                         |..+.|.           .-..++++   .++++.|+. ..|+-+++ .|..+..+....+.++++..   ++-..+
T Consensus       125 G~hy~~RIP~-----------~GRDm~y~~~scDly~~gsg-~evYRlNLEqGrfL~P~~~~~~~lN~v~i---n~~hgL  189 (703)
T KOG2321|consen  125 GRHYRTRIPK-----------FGRDMKYHKPSCDLYLVGSG-SEVYRLNLEQGRFLNPFETDSGELNVVSI---NEEHGL  189 (703)
T ss_pred             CeeeeeecCc-----------CCccccccCCCccEEEeecC-cceEEEEccccccccccccccccceeeee---cCccce
Confidence               2222222           12244554   445555544 46777788 67777778878899999999   566778


Q ss_pred             EEEEeCCCcEEEEeecCCCCcee--EEEEEecCCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         173 FISVSTDQTAMIWEWKVESNSIE--CIHVCRGHER-----GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       173 l~s~~~dg~v~iwd~~~~~~~~~--~~~~~~~~~~-----~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                      |++|+.+|.|.+||.+.......  .......|.+     .|++++|+.+|-.+++|..+|.+.|||+++.+.       
T Consensus       190 la~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~p-------  262 (703)
T KOG2321|consen  190 LACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKP-------  262 (703)
T ss_pred             EEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCc-------
Confidence            99999999999999764332111  1112222333     499999999999999999999999999987443       


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY  323 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~  323 (391)
                                           .+..-.+..-+|..+.|.+.  +.-+.......++|||-.+|+....+.....+..+|+
T Consensus       263 ---------------------l~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~  321 (703)
T KOG2321|consen  263 ---------------------LLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILKIWDECTGKPMASIEPTSDLNDFCF  321 (703)
T ss_pred             ---------------------eeecccCCccceeeecccccCCCceEEecchHHhhhcccccCCceeeccccCCcCceee
Confidence                                 22222344567888888743  3345555677899999999999999988888999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         324 SPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       324 ~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      -|++.++++|-.++.+..|-+..
T Consensus       322 ~p~sGm~f~Ane~~~m~~yyiP~  344 (703)
T KOG2321|consen  322 VPGSGMFFTANESSKMHTYYIPS  344 (703)
T ss_pred             ecCCceEEEecCCCcceeEEccc
Confidence            99999999999888888776654

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.60  E-value=3.5e-12  Score=114.55  Aligned_cols=210  Identities=10%  Similarity=0.079  Sum_probs=134.1

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS  213 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~  213 (391)
                      .|.+||.++.....+..+...+.+.+|   +|+++.|+..+.   +..+.+|++.  .+..+.+..+.+   .+..++|+
T Consensus       180 ~l~~~d~dg~~~~~lt~~~~~~~~p~w---SPDG~~la~~s~~~g~~~i~i~dl~--~G~~~~l~~~~~---~~~~~~~S  251 (429)
T PRK03629        180 ELRVSDYDGYNQFVVHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLA--NGAVRQVASFPR---HNGAPAFS  251 (429)
T ss_pred             eEEEEcCCCCCCEEeecCCCceeeeEE---cCCCCEEEEEEecCCCcEEEEEECC--CCCeEEccCCCC---CcCCeEEC
Confidence            799999987766666667788999999   678887776542   3468888854  333344433333   34568999


Q ss_pred             CCCCEEEEE-eCCC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E
Q psy2107         214 ESRQQFATG-GWDC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I  289 (391)
Q Consensus       214 ~~~~~l~sg-~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l  289 (391)
                      |+|+.|+.. +.+|  .|.+||+++++.                              ..+..+...+....|+|++. |
T Consensus       252 PDG~~La~~~~~~g~~~I~~~d~~tg~~------------------------------~~lt~~~~~~~~~~wSPDG~~I  301 (429)
T PRK03629        252 PDGSKLAFALSKTGSLNLYVMDLASGQI------------------------------RQVTDGRSNNTEPTWFPDSQNL  301 (429)
T ss_pred             CCCCEEEEEEcCCCCcEEEEEECCCCCE------------------------------EEccCCCCCcCceEECCCCCEE
Confidence            999988765 4455  488889875331                              22333344577889997765 6


Q ss_pred             EEEEC-CCe--EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         290 ITSSW-DHT--LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       290 ~s~~~-dg~--i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                      +.++. ++.  |.++|+.++................|+|+|++|+..+.+   ..|++||+.++...    .+... ...
T Consensus       302 ~f~s~~~g~~~Iy~~d~~~g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~----~Lt~~-~~~  376 (429)
T PRK03629        302 AYTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ----VLTDT-FLD  376 (429)
T ss_pred             EEEeCCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE----EeCCC-CCC
Confidence            55554 344  444566666543332223345678999999998876543   35888998776522    22211 123


Q ss_pred             EEEEECCCCCCEEEEeeCCCc---EEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDNS---VKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~---v~iwdl  390 (391)
                      ....|+| ++..|+.++.++.   +.+|++
T Consensus       377 ~~p~~Sp-DG~~i~~~s~~~~~~~l~~~~~  405 (429)
T PRK03629        377 ETPSIAP-NGTMVIYSSSQGMGSVLNLVST  405 (429)
T ss_pred             CCceECC-CCCEEEEEEcCCCceEEEEEEC
Confidence            4678999 5566777776664   556554

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=2.6e-12  Score=116.07  Aligned_cols=212  Identities=10%  Similarity=0.082  Sum_probs=139.3

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ..|.++|.++.....+..|...+.+.+|   +++++.|+..+.   +..|.+||+.  ++...   .+..+.+.+...+|
T Consensus       182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~w---SpDG~~lay~s~~~g~~~i~~~dl~--~g~~~---~l~~~~g~~~~~~~  253 (435)
T PRK05137        182 KRLAIMDQDGANVRYLTDGSSLVLTPRF---SPNRQEITYMSYANGRPRVYLLDLE--TGQRE---LVGNFPGMTFAPRF  253 (435)
T ss_pred             eEEEEECCCCCCcEEEecCCCCeEeeEE---CCCCCEEEEEEecCCCCEEEEEECC--CCcEE---EeecCCCcccCcEE
Confidence            3788999988887778888889999999   778888877653   4679999864  33322   23345567788999


Q ss_pred             cCCCCEEE-EEeCCCc--EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-
Q psy2107         213 SESRQQFA-TGGWDCL--LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-  288 (391)
Q Consensus       213 ~~~~~~l~-sg~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  288 (391)
                      +|+|+.|+ +.+.++.  |.+||+.++.                              ...+..+........|+|++. 
T Consensus       254 SPDG~~la~~~~~~g~~~Iy~~d~~~~~------------------------------~~~Lt~~~~~~~~~~~spDG~~  303 (435)
T PRK05137        254 SPDGRKVVMSLSQGGNTDIYTMDLRSGT------------------------------TTRLTDSPAIDTSPSYSPDGSQ  303 (435)
T ss_pred             CCCCCEEEEEEecCCCceEEEEECCCCc------------------------------eEEccCCCCccCceeEcCCCCE
Confidence            99998775 5555655  6667776532                              233444555567789997664 


Q ss_pred             EEEEEC-CC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEeccccCc
Q psy2107         289 IITSSW-DH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       289 l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      ++..+. +|  .|.++|+..+...........+....|+|+|++|+..+.+   ..|.+||+....   . ..+. ....
T Consensus       304 i~f~s~~~g~~~Iy~~d~~g~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~---~-~~lt-~~~~  378 (435)
T PRK05137        304 IVFESDRSGSPQLYVMNADGSNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG---E-RILT-SGFL  378 (435)
T ss_pred             EEEEECCCCCCeEEEEECCCCCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc---e-Eecc-CCCC
Confidence            555543 33  6888888766554433334456678899999999876543   368888875443   1 1222 2234


Q ss_pred             EEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107         363 VQSVRWSPIDPQLFVSASFDN-----SVKLWDL  390 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl  390 (391)
                      +....|+|++..+++++...+     .+.++|+
T Consensus       379 ~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl  411 (435)
T PRK05137        379 VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL  411 (435)
T ss_pred             CCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence            678899995554444443332     4666554

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.59  E-value=2.2e-13  Score=107.85  Aligned_cols=108  Identities=23%  Similarity=0.455  Sum_probs=81.1

Q ss_pred             cCcccEEEeccCCe-EE--EEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCC
Q psy2107         275 KEAISAVQWTAVDE-II--TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKE  348 (391)
Q Consensus       275 ~~~v~~~~~~~~~~-l~--s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~  348 (391)
                      .++|.+++|+|++. |+  .|..++.|.+||++ ++.+..+. ...+..+.|+|+|++|++|+.+   |.|.+||.+..+
T Consensus        59 ~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~-~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~  136 (194)
T PF08662_consen   59 EGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG-TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK  136 (194)
T ss_pred             CCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec-CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE
Confidence            45799999998654 43  34467899999997 66666664 4567889999999999998743   679999998544


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeC------CCcEEEEec
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF------DNSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~v~iwdl  390 (391)
                         .+.... |. .++.++|+| ++++|++++.      |+.++||++
T Consensus       137 ---~i~~~~-~~-~~t~~~WsP-dGr~~~ta~t~~r~~~dng~~Iw~~  178 (194)
T PF08662_consen  137 ---KISTFE-HS-DATDVEWSP-DGRYLATATTSPRLRVDNGFKIWSF  178 (194)
T ss_pred             ---Eeeccc-cC-cEEEEEEcC-CCCEEEEEEeccceeccccEEEEEe
Confidence               444443 33 479999999 5566776653      789999986

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.59  E-value=4.5e-12  Score=114.01  Aligned_cols=222  Identities=9%  Similarity=0.091  Sum_probs=142.6

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCcEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTAM  183 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~v~  183 (391)
                      ..+..+...+.+.+|+  |+.|+..+.+   ..|.+||+.+.....+....+.+.+.+|   +|+++.|+ +.+.+|...
T Consensus       189 ~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~---SPDG~~la~~~~~~g~~~  265 (427)
T PRK02889        189 QSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAW---SPDGRTLAVALSRDGNSQ  265 (427)
T ss_pred             eEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEE---CCCCCEEEEEEccCCCce
Confidence            3445677889999998  6677766643   3699999965555555545566778999   77887665 567889888


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      +|.++.....   ...+..+........|+|+|+.|+..+. +|...+|.++...                         
T Consensus       266 Iy~~d~~~~~---~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~-------------------------  317 (427)
T PRK02889        266 IYTVNADGSG---LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG-------------------------  317 (427)
T ss_pred             EEEEECCCCC---cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC-------------------------
Confidence            8887654333   2334445555677889999998876654 5677777664211                         


Q ss_pred             CCCCceeeecCccCcccEEEeccCCe-EEEEECCC---eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC-
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDH---TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK-  337 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg-  337 (391)
                        . ....+..+........|+|++. ++..+.++   .|.+||+.+++... +..........|+|+|++|+.++.++ 
T Consensus       318 --g-~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~~~~~~p~~spdg~~l~~~~~~~g  393 (427)
T PRK02889        318 --G-AAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LTDTTRDESPSFAPNGRYILYATQQGG  393 (427)
T ss_pred             --C-ceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-ccCCCCccCceECCCCCEEEEEEecCC
Confidence              0 1111111222334578997664 55555443   69999998876543 33333346789999999888776544 


Q ss_pred             --cEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         338 --QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       338 --~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                        .+++.++. +.   ....+..+.+.+...+|+|
T Consensus       394 ~~~l~~~~~~-g~---~~~~l~~~~g~~~~p~wsp  424 (427)
T PRK02889        394 RSVLAAVSSD-GR---IKQRLSVQGGDVREPSWGP  424 (427)
T ss_pred             CEEEEEEECC-CC---ceEEeecCCCCCCCCccCC
Confidence              35555653 22   3344455667788889988

>PF08154 NLE: NLE (NUC135) domain; InterPro: IPR012972 This domain is located N-terminal to WD40 repeats(IPR001680 from INTERPRO)

Probab=99.58  E-value=6.8e-15  Score=92.40  Aligned_cols=65  Identities=40%  Similarity=0.687  Sum_probs=57.9

Q ss_pred             eEEEEEEeCCCccccCCceEEEecCCCcchHHHHHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHH
Q psy2107          16 EVQLKFFTKQEKYAVPDLVFAVQGNLGVPGLNSLINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFL   85 (391)
Q Consensus        16 ~v~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l   85 (391)
                      +|+|+|+++++.|.++++++.||.++++.+|++++|+||.   +...+  +||+|+++|+++++++.+++
T Consensus         1 qv~v~F~t~~~~~~~~~~~~~VP~~~t~~~Ls~LvN~LL~---~~~~~--vpfdF~i~~~~lr~sL~~~l   65 (65)
T PF08154_consen    1 QVQVQFVTEDGEYEVPGTPISVPSNITRKELSELVNQLLD---DEEEP--VPFDFLINGEELRTSLEEHL   65 (65)
T ss_pred             CEEEEEEcCCCCccCCCCCEEEeCCCCHHHHHHHHHHHhc---cCCCC--CcEEEEECCEEeechHHHhC
Confidence            5899999998889999999999999999999999999992   22334  88999999999999998874

It is found in the microtubule-associated protein Q12024 from SWISSPROT [].

>PRK02889 tolB translocation protein TolB; Provisional

Probab=99.58  E-value=2.4e-12  Score=115.71  Aligned_cols=208  Identities=13%  Similarity=0.122  Sum_probs=131.0

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ..|.++|.++.....+..+...+.+.+|   +|+++.|+..+.+   ..|.+||+.  .+....+.   ...+.+.+.+|
T Consensus       176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~w---SPDG~~la~~s~~~~~~~I~~~dl~--~g~~~~l~---~~~g~~~~~~~  247 (427)
T PRK02889        176 YQLQISDADGQNAQSALSSPEPIISPAW---SPDGTKLAYVSFESKKPVVYVHDLA--TGRRRVVA---NFKGSNSAPAW  247 (427)
T ss_pred             cEEEEECCCCCCceEeccCCCCcccceE---cCCCCEEEEEEccCCCcEEEEEECC--CCCEEEee---cCCCCccceEE
Confidence            4688888877776777778889999999   6788888776643   358888864  33333332   23345678999


Q ss_pred             cCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EE
Q psy2107         213 SESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II  290 (391)
Q Consensus       213 ~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~  290 (391)
                      +|+|+.|+ +.+.+|...+|.++...                            .....+..+........|+|++. ++
T Consensus       248 SPDG~~la~~~~~~g~~~Iy~~d~~~----------------------------~~~~~lt~~~~~~~~~~wSpDG~~l~  299 (427)
T PRK02889        248 SPDGRTLAVALSRDGNSQIYTVNADG----------------------------SGLRRLTQSSGIDTEPFFSPDGRSIY  299 (427)
T ss_pred             CCCCCEEEEEEccCCCceEEEEECCC----------------------------CCcEECCCCCCCCcCeEEcCCCCEEE
Confidence            99998886 56778887777654211                            11233444445566788997765 55


Q ss_pred             EEE-CCCeEEEEec--ccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEE
Q psy2107         291 TSS-WDHTLKIWDA--ELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQ  364 (391)
Q Consensus       291 s~~-~dg~i~iwd~--~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~  364 (391)
                      ..+ .++...+|.+  ..+...............+|+|+|++|+..+.++   .|++||+.++.   .. .+... ....
T Consensus       300 f~s~~~g~~~Iy~~~~~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~---~~-~lt~~-~~~~  374 (427)
T PRK02889        300 FTSDRGGAPQIYRMPASGGAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ---VT-ALTDT-TRDE  374 (427)
T ss_pred             EEecCCCCcEEEEEECCCCceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC---eE-EccCC-CCcc
Confidence            444 3466666654  4444322222222344678999999998776554   69999987765   22 22222 2346


Q ss_pred             EEEECCCCCCEEEEeeCCCc
Q psy2107         365 SVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       365 ~~~~~~~~~~~l~s~~~dg~  384 (391)
                      ...|+|++..++++....|.
T Consensus       375 ~p~~spdg~~l~~~~~~~g~  394 (427)
T PRK02889        375 SPSFAPNGRYILYATQQGGR  394 (427)
T ss_pred             CceECCCCCEEEEEEecCCC
Confidence            78999965554444444444

>KOG3881|consensus

Probab=99.58  E-value=3e-13  Score=111.22  Aligned_cols=221  Identities=13%  Similarity=0.164  Sum_probs=162.8

Q ss_pred             cccCCCCcEEEEEecCCEEEEEECCCeEEEEcCC-----CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC--CcEE
Q psy2107         111 DCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRR-----GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD--QTAM  183 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~-----~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d--g~v~  183 (391)
                      .+...+.+|..++.....|++|-.+|.+.+|...     ...+..+..+ ..+..+.-.|.  .-..+++|+..  ..+.
T Consensus       100 ~~~l~~~~I~gl~~~dg~Litc~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~--~p~Iva~GGke~~n~lk  176 (412)
T KOG3881|consen  100 TVSLGTKSIKGLKLADGTLITCVSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDT--DPYIVATGGKENINELK  176 (412)
T ss_pred             ccccccccccchhhcCCEEEEEecCCcEEEEeccCCccccccceeeecC-CceeeeccCCC--CCceEecCchhccccee
Confidence            3445667888888888899999999999999875     3444444433 44555665433  33467779998  8999


Q ss_pred             EEeecCCCCceeEEEEEecC---------CCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         184 IWEWKVESNSIECIHVCRGH---------ERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~---------~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      +||+...    ..+..-+.-         .-.++.+.|-+.  ...|++++.-+.+++||.+.+                
T Consensus       177 iwdle~~----~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~q----------------  236 (412)
T KOG3881|consen  177 IWDLEQS----KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQ----------------  236 (412)
T ss_pred             eeecccc----eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCccc----------------
Confidence            9996522    222221111         124677888887  788999999999999999742                


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEE-EECC-eeeEEEEECCCCCE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSE-IVGN-KSFFDVHYSPLSKL  329 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~-~~~~-~~i~~~~~~p~~~~  329 (391)
                                  ++|+..+.-...+++++...|++ .+++|..-|.+..||++.++.... +.+- +.+.++..+|.+++
T Consensus       237 ------------RRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~  304 (412)
T KOG3881|consen  237 ------------RRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPV  304 (412)
T ss_pred             ------------CcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCce
Confidence                        45888888888999999998654 588999999999999999988766 4443 48999999999999


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      +++++-|..+||+|+.+..   ++.... -...++++-+.+
T Consensus       305 las~GLDRyvRIhD~ktrk---ll~kvY-vKs~lt~il~~~  341 (412)
T KOG3881|consen  305 LASCGLDRYVRIHDIKTRK---LLHKVY-VKSRLTFILLRD  341 (412)
T ss_pred             EEeeccceeEEEeecccch---hhhhhh-hhccccEEEecC
Confidence            9999999999999998744   332221 233467777755

>KOG2321|consensus

Probab=99.57  E-value=8.8e-13  Score=113.69  Aligned_cols=240  Identities=10%  Similarity=0.141  Sum_probs=159.9

Q ss_pred             cCCCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEecc-----------------------------CC------
Q psy2107         113 ILHDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIP-----------------------------GH------  154 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~-----------------------------~~------  154 (391)
                      ++|...-+.|..+  |+ .+|+|.+--.|++||+....+.--.                             -|      
T Consensus        48 fe~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~h  127 (703)
T KOG2321|consen   48 FEMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRH  127 (703)
T ss_pred             cCCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCee
Confidence            3456666677776  55 6788889999999997432211100                             01      


Q ss_pred             -----CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107         155 -----GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK  229 (391)
Q Consensus       155 -----~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~  229 (391)
                           ...-..++++.  +...++ .++....|.-++++    .+..+..+....+.++++..++-..+|++|+.+|.|.
T Consensus       128 y~~RIP~~GRDm~y~~--~scDly-~~gsg~evYRlNLE----qGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VE  200 (703)
T KOG2321|consen  128 YRTRIPKFGRDMKYHK--PSCDLY-LVGSGSEVYRLNLE----QGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVE  200 (703)
T ss_pred             eeeecCcCCccccccC--CCccEE-EeecCcceEEEEcc----ccccccccccccccceeeeecCccceEEecccCceEE
Confidence                 11222333321  222333 33444445555543    4456666776778999999999999999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-----cCcccEEEeccCCe-EEEEECCCeEEEEec
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-----KEAISAVQWTAVDE-IITSSWDHTLKIWDA  303 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~  303 (391)
                      .||.+.........                       .......|     ...|+++.|.+++. +++|+.+|.+.|||+
T Consensus       201 fwDpR~ksrv~~l~-----------------------~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDL  257 (703)
T KOG2321|consen  201 FWDPRDKSRVGTLD-----------------------AASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDL  257 (703)
T ss_pred             Eecchhhhhheeee-----------------------cccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEc
Confidence            99998744322110                       01111122     33599999997676 999999999999999


Q ss_pred             ccCceeEEEECCe--eeEEEEECCC--CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         304 ELGGMKSEIVGNK--SFFDVHYSPL--SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       304 ~~~~~~~~~~~~~--~i~~~~~~p~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      +..+++..-.+..  +|..+.|.+.  ++.+++. +...++|||-.+++   ....+. ....++.+++-| +.-++.++
T Consensus       258 Ra~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk---~~asiE-pt~~lND~C~~p-~sGm~f~A  331 (703)
T KOG2321|consen  258 RASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGK---PMASIE-PTSDLNDFCFVP-GSGMFFTA  331 (703)
T ss_pred             ccCCceeecccCCccceeeecccccCCCceEEec-chHHhhhcccccCC---ceeecc-ccCCcCceeeec-CCceEEEe
Confidence            9999887766554  8999999776  4456554 46789999988876   333333 344599999999 55578888


Q ss_pred             eCCCcEEEE
Q psy2107         380 SFDNSVKLW  388 (391)
Q Consensus       380 ~~dg~v~iw  388 (391)
                      -.++.+..|
T Consensus       332 ne~~~m~~y  340 (703)
T KOG2321|consen  332 NESSKMHTY  340 (703)
T ss_pred             cCCCcceeE
Confidence            877766554

>KOG2394|consensus

Probab=99.57  E-value=2.8e-14  Score=121.76  Aligned_cols=115  Identities=20%  Similarity=0.285  Sum_probs=88.3

Q ss_pred             CCCcEEEEEec---CCEEEEEECCCeEEEEcCCC---------------ce--EEe------------ccCCCCCeeEEE
Q psy2107         115 HDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG---------------EH--KLN------------IPGHGGPVKGVA  162 (391)
Q Consensus       115 h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~---------------~~--~~~------------~~~~~~~v~~l~  162 (391)
                      .+..|+|+.|-   ...++++-.+|.+++||..-               ..  +.+            ..--.+.|...+
T Consensus       218 ~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~  297 (636)
T KOG2394|consen  218 NKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFA  297 (636)
T ss_pred             cccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEecccccccee
Confidence            34789999996   44888888999999996410               00  111            111234677888


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS  236 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~  236 (391)
                      |   ++++.+||+.+.||.+||+|+.    ....+..++..-+...|++|+|||++|++|++|.-|.||.+...
T Consensus       298 F---S~DG~~LA~VSqDGfLRvF~fd----t~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~er  364 (636)
T KOG2394|consen  298 F---SPDGKYLATVSQDGFLRIFDFD----TQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEER  364 (636)
T ss_pred             E---cCCCceEEEEecCceEEEeecc----HHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccc
Confidence            8   7799999999999999999975    33444455556788999999999999999999999999999763

>KOG2111|consensus

Probab=99.57  E-value=6.7e-12  Score=100.71  Aligned_cols=227  Identities=13%  Similarity=0.187  Sum_probs=143.4

Q ss_pred             EEEEEecC--CEEEEEECCCeEEEEcCCCceEE---eccCCCCCeeEEEEEecCCCCeEEE-EEeCC------CcEEEEe
Q psy2107         119 VSAIDFHN--DWILTGCYDHSVHIWTRRGEHKL---NIPGHGGPVKGVAWLYNDGKDAAFI-SVSTD------QTAMIWE  186 (391)
Q Consensus       119 V~~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~---~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~d------g~v~iwd  186 (391)
                      ...++|+.  ..+++|..+| .+||+.+.-...   ......-.+..+-|     ..++|+ .|+.+      ..|.|||
T Consensus         8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLf-----R~N~laLVGGg~~pky~pNkviIWD   81 (346)
T KOG2111|consen    8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLF-----RSNYLALVGGGSRPKYPPNKVIIWD   81 (346)
T ss_pred             eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhh-----hhceEEEecCCCCCCCCCceEEEEe
Confidence            34588883  3666666665 899988542221   11111122333333     122333 33332      5799999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                          .....++..+. ...+|.++.+.++.  |++. ..+.|.+|...+.-                            +
T Consensus        82 ----D~k~~~i~el~-f~~~I~~V~l~r~r--iVvv-l~~~I~VytF~~n~----------------------------k  125 (346)
T KOG2111|consen   82 ----DLKERCIIELS-FNSEIKAVKLRRDR--IVVV-LENKIYVYTFPDNP----------------------------K  125 (346)
T ss_pred             ----cccCcEEEEEE-eccceeeEEEcCCe--EEEE-ecCeEEEEEcCCCh----------------------------h
Confidence                33445565554 47799999998763  5544 35689999986311                            1


Q ss_pred             ceeeecCcc--CcccEEEeccCCeEEE--EECCCeEEEEecccCce--eEEEE-CCeeeEEEEECCCCCEEEEeeCCCc-
Q psy2107         267 PLITLKGHK--EAISAVQWTAVDEIIT--SSWDHTLKIWDAELGGM--KSEIV-GNKSFFDVHYSPLSKLVITASADKQ-  338 (391)
Q Consensus       267 ~~~~~~~~~--~~v~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~~--~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~-  338 (391)
                      .+..+....  ....+++-..+..+++  |-.-|.|+|-|+...+.  ...+. +...|.|++++.+|.++|++|..|+ 
T Consensus       126 ~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTL  205 (346)
T KOG2111|consen  126 LLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTL  205 (346)
T ss_pred             heeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEE
Confidence            222222111  1122222222222222  34569999999986655  24444 4559999999999999999999986 


Q ss_pred             EEEEcCCCCCcceEEEEecc--ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSS--HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |||||..+++   .+.+++.  ....|.+|+||| +..+|+.+|+-|++.|+.+|
T Consensus       206 IRIFdt~~g~---~l~E~RRG~d~A~iy~iaFSp-~~s~LavsSdKgTlHiF~l~  256 (346)
T KOG2111|consen  206 IRIFDTEDGT---LLQELRRGVDRADIYCIAFSP-NSSWLAVSSDKGTLHIFSLR  256 (346)
T ss_pred             EEEEEcCCCc---EeeeeecCCchheEEEEEeCC-CccEEEEEcCCCeEEEEEee
Confidence            8999998876   5555432  335799999999 77889999999999999875

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.56  E-value=4.2e-12  Score=114.58  Aligned_cols=212  Identities=14%  Similarity=0.123  Sum_probs=135.2

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ..|.+||.++.....+..+...+.+.+|   +++++.|+..+.+   ..|.+||+.  .+....+.   ...+...+++|
T Consensus       184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~w---SpDg~~la~~s~~~~~~~l~~~dl~--~g~~~~l~---~~~g~~~~~~~  255 (433)
T PRK04922        184 YALQVADSDGYNPQTILRSAEPILSPAW---SPDGKKLAYVSFERGRSAIYVQDLA--TGQRELVA---SFRGINGAPSF  255 (433)
T ss_pred             EEEEEECCCCCCceEeecCCCccccccC---CCCCCEEEEEecCCCCcEEEEEECC--CCCEEEec---cCCCCccCceE
Confidence            3699999987777777778888999999   7788888877643   468888864  33333332   23344567899


Q ss_pred             cCCCCEEE-EEeCCC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-
Q psy2107         213 SESRQQFA-TGGWDC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-  288 (391)
Q Consensus       213 ~~~~~~l~-sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  288 (391)
                      +|+|+.|+ +.+.+|  .|++||+.++.                              ...+..+.......+|+|++. 
T Consensus       256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~------------------------------~~~lt~~~~~~~~~~~spDG~~  305 (433)
T PRK04922        256 SPDGRRLALTLSRDGNPEIYVMDLGSRQ------------------------------LTRLTNHFGIDTEPTWAPDGKS  305 (433)
T ss_pred             CCCCCEEEEEEeCCCCceEEEEECCCCC------------------------------eEECccCCCCccceEECCCCCE
Confidence            99998775 445555  58889987533                              223334444456789997664 


Q ss_pred             EEEEE-CCCe--EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCc
Q psy2107         289 IITSS-WDHT--LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       289 l~s~~-~dg~--i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      ++.++ .+|.  |.++|+.+++..............+|+|+|++|+..+.++   .|.+||+.+++   .. .+. +...
T Consensus       306 l~f~sd~~g~~~iy~~dl~~g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~---~~-~Lt-~~~~  380 (433)
T PRK04922        306 IYFTSDRGGRPQIYRVAASGGSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS---VR-TLT-PGSL  380 (433)
T ss_pred             EEEEECCCCCceEEEEECCCCCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC---eE-ECC-CCCC
Confidence            55555 3444  6666776665433222223344689999999988765443   69999987654   22 222 2234


Q ss_pred             EEEEEECCCCCCEEEEeeCCC--cEEEEec
Q psy2107         363 VQSVRWSPIDPQLFVSASFDN--SVKLWDL  390 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg--~v~iwdl  390 (391)
                      .....|+|++..++++....|  .+.++++
T Consensus       381 ~~~p~~spdG~~i~~~s~~~g~~~L~~~~~  410 (433)
T PRK04922        381 DESPSFAPNGSMVLYATREGGRGVLAAVST  410 (433)
T ss_pred             CCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence            556789995544444443333  4666654

>KOG1354|consensus

Probab=99.55  E-value=1.3e-12  Score=105.74  Aligned_cols=244  Identities=18%  Similarity=0.393  Sum_probs=164.8

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc------eEEeccCC------------CCCeeEEEEEecCCCCeEEE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE------HKLNIPGH------------GGPVKGVAWLYNDGKDAAFI  174 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~------~~~~~~~~------------~~~v~~l~~~~~~~~~~~l~  174 (391)
                      ..+-|.++.|+  |++||||..+|.|.++.-+..      ....++.|            ...|..+.|++. .+...++
T Consensus        24 eadiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~-~n~a~FL  102 (433)
T KOG1354|consen   24 EADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDD-GNLAEFL  102 (433)
T ss_pred             hhcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCC-CCccEEE
Confidence            44578899997  999999999999999965211      11223223            357889999774 3455677


Q ss_pred             EEeCCCcEEEEeecCCCCce-------------------------------eEEEEE-ecCCCCeEEEEEcCCCCEEEEE
Q psy2107         175 SVSTDQTAMIWEWKVESNSI-------------------------------ECIHVC-RGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~~~~-------------------------------~~~~~~-~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                      ..+.|.+|++|.+.......                               .+.+.+ ..|.-.|.++.++.|+..++++
T Consensus       103 lstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA  182 (433)
T KOG1354|consen  103 LSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA  182 (433)
T ss_pred             EecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec
Confidence            77889999999875322111                               011111 2577789999999999988876


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-----cCcccEEEeccC--CeEEEEECC
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-----KEAISAVQWTAV--DEIITSSWD  295 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~--~~l~s~~~d  295 (391)
                      . |=.|.+|+++-..+.                          -.+..++.+     ..-|++..|+|.  +.++-.+..
T Consensus       183 D-dLRINLWnlei~d~s--------------------------FnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSK  235 (433)
T KOG1354|consen  183 D-DLRINLWNLEIIDQS--------------------------FNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSK  235 (433)
T ss_pred             c-ceeeeeccccccCCc--------------------------eeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCC
Confidence            4 668999998653221                          112222222     345888899964  568888999


Q ss_pred             CeEEEEecccCceeEE----E--EC-----------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc
Q psy2107         296 HTLKIWDAELGGMKSE----I--VG-----------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~----~--~~-----------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~  358 (391)
                      |+|++.|++...+.-.    +  ..           -..|..+.|+++|+|+++-. =-+|++||+.....+  +.++.-
T Consensus       236 GtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRD-yltvk~wD~nme~~p--v~t~~v  312 (433)
T KOG1354|consen  236 GTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRD-YLTVKLWDLNMEAKP--VETYPV  312 (433)
T ss_pred             CcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEec-cceeEEEeccccCCc--ceEEee
Confidence            9999999985432111    1  10           02588899999999999764 368999999654433  333433


Q ss_pred             cc------------Cc---EEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HK------------EW---VQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~------------~~---v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |.            ..   =..++|+- +...++||+....++++++
T Consensus       313 h~~lr~kLc~lYEnD~IfdKFec~~sg-~~~~v~TGsy~n~frvf~~  358 (433)
T KOG1354|consen  313 HEYLRSKLCSLYENDAIFDKFECSWSG-NDSYVMTGSYNNVFRVFNL  358 (433)
T ss_pred             hHhHHHHHHHHhhccchhheeEEEEcC-CcceEecccccceEEEecC
Confidence            42            12   24578887 5568999999999999984

>KOG0974|consensus

Probab=99.54  E-value=6.5e-13  Score=122.08  Aligned_cols=197  Identities=17%  Similarity=0.212  Sum_probs=153.0

Q ss_pred             CCcEEEEEe--cCCEEEEEECCCeEEEEcCCCceEEeccCCCCCe--eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         116 DDWVSAIDF--HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPV--KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       116 ~~~V~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      .++|..-.+  ....++.++.++.+.+||.....+..-..+...+  .+....-.+.+.-++++|+.-+.|.+|++....
T Consensus        87 s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn  166 (967)
T KOG0974|consen   87 SDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDN  166 (967)
T ss_pred             cccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccC
Confidence            344544333  3668999999999999999665555444444332  222222336677799999999999999975211


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                         .+. .+.+|.+.|.++.++.+|+++++.|+|..+++|++++.+.                            .....
T Consensus       167 ---~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~----------------------------~~~~~  214 (967)
T KOG0974|consen  167 ---KPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREV----------------------------LGCTG  214 (967)
T ss_pred             ---Ccc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccc----------------------------cCccc
Confidence               222 5789999999999999999999999999999999988554                            22356


Q ss_pred             cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      .+|+..|..+.|.|. ++++++.|.+.++|+.. +..+..+..|.  .+..++..+....+++++.|+.+++|++..
T Consensus       215 fgHsaRvw~~~~~~n-~i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~  289 (967)
T KOG0974|consen  215 FGHSARVWACCFLPN-RIITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG  289 (967)
T ss_pred             ccccceeEEEEeccc-eeEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence            689999999999987 99999999999999654 45555666554  799999999999999999999999999754

>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins

Probab=99.53  E-value=2e-12  Score=102.45  Aligned_cols=131  Identities=14%  Similarity=0.274  Sum_probs=93.6

Q ss_pred             CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE--eCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG--GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      |...+|.++....... ...+. ..++|.+++|+|+++.|++.  ..++.|.+||++.                      
T Consensus        37 ~~~~l~~~~~~~~~~~-~i~l~-~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~~----------------------   92 (194)
T PF08662_consen   37 GEFELFYLNEKNIPVE-SIELK-KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVKG----------------------   92 (194)
T ss_pred             eeEEEEEEecCCCccc-eeecc-CCCceEEEEECcCCCEEEEEEccCCcccEEEcCcc----------------------
Confidence            3456666543332222 12222 34579999999999987554  4678999999952                      


Q ss_pred             ccccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC---CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW---DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                              ..+..+  +...+..+.|+|.+. +++++.   .|.|.+||+++.+.+....+. .+..++|+|+|++++++
T Consensus        93 --------~~i~~~--~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~~~ta  161 (194)
T PF08662_consen   93 --------KKIFSF--GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRYLATA  161 (194)
T ss_pred             --------cEeEee--cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCEEEEE
Confidence                    234444  356778999998775 666653   467999999988888777654 46899999999999998


Q ss_pred             eC------CCcEEEEcCC
Q psy2107         334 SA------DKQIRLYDPK  345 (391)
Q Consensus       334 ~~------dg~i~iwd~~  345 (391)
                      +.      |+.++||+..
T Consensus       162 ~t~~r~~~dng~~Iw~~~  179 (194)
T PF08662_consen  162 TTSPRLRVDNGFKIWSFQ  179 (194)
T ss_pred             EeccceeccccEEEEEec
Confidence            64      7889999974

>PRK03629 tolB translocation protein TolB; Provisional

Probab=99.53  E-value=1.8e-11  Score=110.04  Aligned_cols=217  Identities=11%  Similarity=0.047  Sum_probs=139.2

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEE---CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEE-eCCCc--E
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGC---YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISV-STDQT--A  182 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~---~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~-~~dg~--v  182 (391)
                      .+..+...+.+.+|+  |+.|+..+   .+..|.+|++.+.....+....+.+....|   +|+++.|+.. +.+|.  |
T Consensus       193 ~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~---SPDG~~La~~~~~~g~~~I  269 (429)
T PRK03629        193 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SPDGSKLAFALSKTGSLNL  269 (429)
T ss_pred             EeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEE---CCCCCEEEEEEcCCCCcEE
Confidence            344566788899998  56676544   235799999965544444444455667899   7788877754 44554  7


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-CcEEEE--ECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-CLLKIW--SADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-g~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      .+||+.  +...   ..+..+...+....|+|+|+.|+..+.+ +...+|  |+.++.                      
T Consensus       270 ~~~d~~--tg~~---~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~----------------------  322 (429)
T PRK03629        270 YVMDLA--SGQI---RQVTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA----------------------  322 (429)
T ss_pred             EEEECC--CCCE---EEccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC----------------------
Confidence            777743  3322   2333344567889999999988777654 455555  444321                      


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC---CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD---HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                              ...+..+........|+|++. ++..+.+   ..|.+||+.++... .+..........|+|||++|+.++.
T Consensus       323 --------~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~~~~~~p~~SpDG~~i~~~s~  393 (429)
T PRK03629        323 --------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDTFLDETPSIAPNGTMVIYSSS  393 (429)
T ss_pred             --------eEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCCCCCCCceECCCCCEEEEEEc
Confidence                    122222334456788997664 5554432   35888999887643 3332223446789999999998887


Q ss_pred             CCc---EEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         336 DKQ---IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       336 dg~---i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      ++.   +.++++...    ....+.+|.+.+...+|+|
T Consensus       394 ~~~~~~l~~~~~~G~----~~~~l~~~~~~~~~p~Wsp  427 (429)
T PRK03629        394 QGMGSVLNLVSTDGR----FKARLPATDGQVKFPAWSP  427 (429)
T ss_pred             CCCceEEEEEECCCC----CeEECccCCCCcCCcccCC
Confidence            764   677776433    3445667888899999998

>KOG1354|consensus

Probab=99.50  E-value=2.1e-12  Score=104.63  Aligned_cols=262  Identities=16%  Similarity=0.211  Sum_probs=166.0

Q ss_pred             eeEEeCCeEehhhHHH-----HHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec----CCEEEEEECCCeE
Q psy2107          68 FDFLIAGELLRTSVTS-----FLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH----NDWILTGCYDHSV  138 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~-----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~----~~~l~t~~~dg~i  138 (391)
                      .+|...|..|+++-..     |-+......|-.+.-.++...+.-..+..+.-...|..+.|.    ...++..+.|.+|
T Consensus        31 vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlstNdkti  110 (433)
T KOG1354|consen   31 VEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLSTNDKTI  110 (433)
T ss_pred             EEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEecCCcce
Confidence            5777788887763221     001111111212222222233333445566677889999996    3478888999999


Q ss_pred             EEEcCCC--ceE-------------------Ee----------------ccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         139 HIWTRRG--EHK-------------------LN----------------IPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       139 ~iwd~~~--~~~-------------------~~----------------~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      ++|.+..  ...                   ..                -..|...|.++++   +.+...++++ .|=.
T Consensus       111 KlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~---NsD~Et~lSA-DdLR  186 (433)
T KOG1354|consen  111 KLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISV---NSDKETFLSA-DDLR  186 (433)
T ss_pred             eeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeee---cCccceEeec-ccee
Confidence            9997621  110                   00                0258888999998   6677777765 5788


Q ss_pred             EEEEeecCCCCceeEEEEEec----CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRG----HERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~----~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      |.+|+++...+....+-.-..    -..-|++..|+|. .+.++-.+..|+|++-|++.......             ..
T Consensus       187 INLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~-------------hs  253 (433)
T KOG1354|consen  187 INLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDA-------------HS  253 (433)
T ss_pred             eeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcc-------------hh
Confidence            999998876666554433221    1346889999994 46777888899999999986433110             00


Q ss_pred             cccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecc-cCceeEEEECCe----------------eeE
Q psy2107         257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE-LGGMKSEIVGNK----------------SFF  319 (391)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~----------------~i~  319 (391)
                      ..+...........+..--..|..+.|+++|+.+.+-.--+|++||+. ..+++.+++.|.                .-.
T Consensus       254 KlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDyltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKF  333 (433)
T KOG1354|consen  254 KLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDYLTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKF  333 (433)
T ss_pred             hhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEeccceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhhee
Confidence            111111111122223333457889999987776666556899999994 566777776542                235


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         320 DVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      .++|+.++.++++|+..+..++|+...
T Consensus       334 ec~~sg~~~~v~TGsy~n~frvf~~~~  360 (433)
T KOG1354|consen  334 ECSWSGNDSYVMTGSYNNVFRVFNLAR  360 (433)
T ss_pred             EEEEcCCcceEecccccceEEEecCCC
Confidence            688999999999999999999999543

>KOG4547|consensus

Probab=99.50  E-value=3e-12  Score=110.90  Aligned_cols=187  Identities=17%  Similarity=0.162  Sum_probs=142.3

Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe---cCCCCeEEEEEc--------------------CCCCEEEEEeC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR---GHERGLETVTVS--------------------ESRQQFATGGW  224 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~--------------------~~~~~l~sg~~  224 (391)
                      +...++|....||.+++|+..  .+.  ....+.   .-.+..++..|.                    .+...++-|..
T Consensus         3 ~~~~~~A~~~~~g~l~iw~t~--~~~--~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~   78 (541)
T KOG4547|consen    3 PALDYFALSTGDGRLRIWDTA--KNQ--LQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTP   78 (541)
T ss_pred             chhheEeecCCCCeEEEEEcc--Cce--eeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecC
Confidence            356789999999999999954  222  112221   123344444441                    23346788888


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEec
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDA  303 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~  303 (391)
                      .|.|.+|++..++.                           .....-..|.+.|.++.++ .-+.|.+++.|+.+..|+.
T Consensus        79 ~g~v~~ys~~~g~i---------------------------t~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~  131 (541)
T KOG4547|consen   79 QGSVLLYSVAGGEI---------------------------TAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILE  131 (541)
T ss_pred             CccEEEEEecCCeE---------------------------EEEEecCCCCCcceeeecccccCceEecCCceeEEEEec
Confidence            99999999876442                           1122224789999999998 5567999999999999999


Q ss_pred             ccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC-----CCCEEE
Q psy2107         304 ELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFV  377 (391)
Q Consensus       304 ~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~  377 (391)
                      ...+.++.+.... .+.+++++|||..+++|+  +.|++||+++++   .+..+.+|.++|++++|...     +.++|.
T Consensus       132 ~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~ke---vv~~ftgh~s~v~t~~f~~~~~g~~G~~vLs  206 (541)
T KOG4547|consen  132 KEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKE---VVITFTGHGSPVRTLSFTTLIDGIIGKYVLS  206 (541)
T ss_pred             ccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCce---EEEEecCCCcceEEEEEEEeccccccceeee
Confidence            9999999988766 788999999999999885  789999999887   89999999999999999874     456677


Q ss_pred             EeeCCCcEEEEec
Q psy2107         378 SASFDNSVKLWDL  390 (391)
Q Consensus       378 s~~~dg~v~iwdl  390 (391)
                      +...+..+.+|-+
T Consensus       207 sa~~~r~i~~w~v  219 (541)
T KOG4547|consen  207 SAAAERGITVWVV  219 (541)
T ss_pred             ccccccceeEEEE
Confidence            7777777888854

>PRK04922 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=1.3e-10  Score=104.99  Aligned_cols=219  Identities=10%  Similarity=0.070  Sum_probs=139.3

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCc-
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQT-  181 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~-  181 (391)
                      +..+..|...+.+.+|+  ++.|+..+.+   ..|++||+.+.....+....+...+.+|   +++++.++ +.+.+|. 
T Consensus       196 ~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~---SpDG~~l~~~~s~~g~~  272 (433)
T PRK04922        196 PQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSF---SPDGRRLALTLSRDGNP  272 (433)
T ss_pred             ceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceE---CCCCCEEEEEEeCCCCc
Confidence            34455677789899997  6677777643   4699999966555555555555668899   77787664 5566664 


Q ss_pred             -EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         182 -AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCL--LKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       182 -v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                       |.+||+.  ...   ...+..+.......+|+|+++.|+..+. +|.  |.++|+.+++.                   
T Consensus       273 ~Iy~~d~~--~g~---~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~-------------------  328 (433)
T PRK04922        273 EIYVMDLG--SRQ---LTRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA-------------------  328 (433)
T ss_pred             eEEEEECC--CCC---eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCe-------------------
Confidence             7777753  332   2334445555678899999998887664 455  55556544221                   


Q ss_pred             ccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCC---eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDH---TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                                 ..+..+.......+|+|++. ++..+.++   .|.+||+.+++.. .+..........|+|+|++++..
T Consensus       329 -----------~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spdG~~i~~~  396 (433)
T PRK04922        329 -----------ERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPNGSMVLYA  396 (433)
T ss_pred             -----------EEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCCCCEEEEE
Confidence                       11222223445688997665 55444332   6999999887654 33333344567899999988776


Q ss_pred             eCC---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         334 SAD---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       334 ~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      +.+   +.|+++++...    ....+..+.+.+...+|+|
T Consensus       397 s~~~g~~~L~~~~~~g~----~~~~l~~~~g~~~~p~wsp  432 (433)
T PRK04922        397 TREGGRGVLAAVSTDGR----VRQRLVSADGEVREPAWSP  432 (433)
T ss_pred             EecCCceEEEEEECCCC----ceEEcccCCCCCCCCccCC
Confidence            653   46778887432    2344545566778888887

>KOG0974|consensus

Probab=99.49  E-value=1.2e-12  Score=120.37  Aligned_cols=183  Identities=17%  Similarity=0.277  Sum_probs=139.6

Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC----CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER----GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS  243 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~  243 (391)
                      .....++.++.++.+.+||...    ........+...    ...-+-++++.-++++|+.-+.|.+|+....       
T Consensus        97 ~e~k~i~l~~~~ns~~i~d~~~----~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~d-------  165 (967)
T KOG0974|consen   97 EENKKIALVTSRNSLLIRDSKN----SSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHED-------  165 (967)
T ss_pred             hhcceEEEEEcCceEEEEeccc----CceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEecccc-------
Confidence            3667889999999999999541    122222221111    1122334667778999999999999998621       


Q ss_pred             CCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeE--EEECCeeeEE
Q psy2107         244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKS--EIVGNKSFFD  320 (391)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~i~~  320 (391)
                                           ..+. .+.+|.+.|.++.|+ ++.++++.|.|.++|+|++.+++...  -+.+...++.
T Consensus       166 ---------------------n~p~-~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~  223 (967)
T KOG0974|consen  166 ---------------------NKPI-RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWA  223 (967)
T ss_pred             ---------------------CCcc-eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEE
Confidence                                 1222 688999999999999 66779999999999999999987765  3445558999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc-CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK-EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++|.|.  .+++++.|.+.++|+.....    ...+.+|. ..+..++..+ +..+++|++.||.+++||+
T Consensus       224 ~~~~~n--~i~t~gedctcrvW~~~~~~----l~~y~~h~g~~iw~~~~~~-~~~~~vT~g~Ds~lk~~~l  287 (967)
T KOG0974|consen  224 CCFLPN--RIITVGEDCTCRVWGVNGTQ----LEVYDEHSGKGIWKIAVPI-GVIIKVTGGNDSTLKLWDL  287 (967)
T ss_pred             EEeccc--eeEEeccceEEEEEecccce----ehhhhhhhhcceeEEEEcC-CceEEEeeccCcchhhhhh
Confidence            999987  99999999999999765433    33666675 4689999988 7788999999999999986

>PRK05137 tolB translocation protein TolB; Provisional

Probab=99.49  E-value=2e-10  Score=103.94  Aligned_cols=220  Identities=11%  Similarity=0.058  Sum_probs=141.4

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEEC---CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCcE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCY---DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTA  182 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~v  182 (391)
                      ...+..|...+.+.+|+  |+.|+..+.   +..|.+||+.+.....+..+.+.+.+.+|   +|+++.|+ +.+.+|..
T Consensus       194 ~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~---SPDG~~la~~~~~~g~~  270 (435)
T PRK05137        194 VRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRF---SPDGRKVVMSLSQGGNT  270 (435)
T ss_pred             cEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEE---CCCCCEEEEEEecCCCc
Confidence            34455788899999998  567776653   46899999976666666667778888999   77787654 66667765


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      .+|-++.....   ...+..+........|+|+|+.|+..+. +|  .|.+||+..+.                      
T Consensus       271 ~Iy~~d~~~~~---~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~----------------------  325 (435)
T PRK05137        271 DIYTMDLRSGT---TTRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN----------------------  325 (435)
T ss_pred             eEEEEECCCCc---eEEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC----------------------
Confidence            55543343333   2334445556778999999998887764 33  57777765422                      


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC---CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD---HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                              ...+..+...+....|+|++. ++..+.+   ..|.+||+..+.. ..+.....+....|+|+|++|+..+.
T Consensus       326 --------~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt~~~~~~~p~~spDG~~i~~~~~  396 (435)
T PRK05137        326 --------PRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILTSGFLVEGPTWAPNGRVIMFFRQ  396 (435)
T ss_pred             --------eEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-EeccCCCCCCCCeECCCCCEEEEEEc
Confidence                    122222344566788997665 5554432   3688888765443 33333335677899999998876544


Q ss_pred             C------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         336 D------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       336 d------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      +      ..++++|+....   . ..+. ..+.+...+|+|
T Consensus       397 ~~~~~~~~~L~~~dl~g~~---~-~~l~-~~~~~~~p~Wsp  432 (435)
T PRK05137        397 TPGSGGAPKLYTVDLTGRN---E-REVP-TPGDASDPAWSP  432 (435)
T ss_pred             cCCCCCcceEEEEECCCCc---e-EEcc-CCCCccCcccCC
Confidence            3      257888876543   2 2333 234467778887

>KOG4497|consensus

Probab=99.49  E-value=5.2e-11  Score=96.19  Aligned_cols=278  Identities=15%  Similarity=0.203  Sum_probs=172.2

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--C-CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCC
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--N-DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      .+..+.+|......-  .-....-.+.+.+++|+  | ..|.+...|-.|.+|.+.++...-++-.+..+..++|   ++
T Consensus        69 k~~~vqvwsl~Qpew--~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f---~~  143 (447)
T KOG4497|consen   69 KDPKVQVWSLVQPEW--YCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAF---HP  143 (447)
T ss_pred             ccceEEEEEeeccee--EEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEE---CC
Confidence            445566665532211  11222355678889998  4 3788889999999999977766666655556788888   67


Q ss_pred             CCeEEEEEeCC------------------------------------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         169 KDAAFISVSTD------------------------------------QTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       169 ~~~~l~s~~~d------------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ++++.+.++.-                                    ..+.+||-..   .. .+..+ ...-.+..++|
T Consensus       144 dg~f~ai~sRrDCkdyv~i~~c~~W~ll~~f~~dT~DltgieWsPdg~~laVwd~~L---ey-kv~aY-e~~lG~k~v~w  218 (447)
T KOG4497|consen  144 DGQFCAILSRRDCKDYVQISSCKAWILLKEFKLDTIDLTGIEWSPDGNWLAVWDNVL---EY-KVYAY-ERGLGLKFVEW  218 (447)
T ss_pred             CCceeeeeecccHHHHHHHHhhHHHHHHHhcCCCcccccCceECCCCcEEEEecchh---hh-eeeee-eeccceeEEEe
Confidence            78777655431                                    1233343110   00 01111 12357899999


Q ss_pred             cCCCCEEEEEeCCCcEEEEECCCCCCCCCCC---CCCC---------------------CCccccccc-------ccc--
Q psy2107         213 SESRQQFATGGWDCLLKIWSADISKERGDPS---ENGD---------------------EGTTSKKRK-------KEY--  259 (391)
Q Consensus       213 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~---~~~~---------------------~~~~~~~~~-------~~~--  259 (391)
                      +|.+++|+.|+.|+.+++.+--+-+...+..   ....                     .........       ..+  
T Consensus       219 sP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~  298 (447)
T KOG4497|consen  219 SPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQ  298 (447)
T ss_pred             ccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhh
Confidence            9999999999999999986543333222110   0000                     000000000       000  


Q ss_pred             ----ccCCCCCceeeecCccCcccEEEeccCCeEEEEECC---CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEE
Q psy2107         260 ----SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD---HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       260 ----~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~  332 (391)
                          ......++...+....-.+..++|+++...++.-.|   ..+-+||++.-+.-..+....+|....|.|....|+.
T Consensus       299 ~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~v  378 (447)
T KOG4497|consen  299 QMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVV  378 (447)
T ss_pred             hhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEE
Confidence                011112222233334556788999988777666555   4689999998888777777889999999999888888


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      +.....+++|.+..   ...+. ..+..-.|..+.|.. .+..++-++.|..
T Consensus       379 ctg~srLY~W~psg---~~~V~-vP~~GF~i~~l~W~~-~g~~i~l~~kDaf  425 (447)
T KOG4497|consen  379 CTGKSRLYFWAPSG---PRVVG-VPKKGFNIQKLQWLQ-PGEFIVLCGKDAF  425 (447)
T ss_pred             EcCCceEEEEcCCC---ceEEe-cCCCCceeeeEEecC-CCcEEEEEcCCce
Confidence            88788899998753   22332 223335699999998 5556888887753

>KOG0280|consensus

Probab=99.46  E-value=1.4e-11  Score=97.87  Aligned_cols=237  Identities=16%  Similarity=0.209  Sum_probs=163.6

Q ss_pred             cEEEEEec-----CC-EEEEEECCCeEEEEcCCC-ceEEeccCC---C---CCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         118 WVSAIDFH-----ND-WILTGCYDHSVHIWTRRG-EHKLNIPGH---G---GPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       118 ~V~~~~~~-----~~-~l~t~~~dg~i~iwd~~~-~~~~~~~~~---~---~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      .+..+.|.     ++ .++-+-.+|.|.++.... .....+.+-   .   ....++.|   ++.+..++++..+|.+.+
T Consensus        71 ~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~---~~~~~~i~vs~s~G~~~~  147 (339)
T KOG0280|consen   71 TEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDI---STSGTKIFVSDSRGSISG  147 (339)
T ss_pred             ccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEe---eccCceEEEEcCCCcEEE
Confidence            34455553     44 667777889999997632 222222221   1   12457778   556777999999999985


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      -+  ......+.++..+.|.-+....+|+. +.+++.+|+.|+.+..||++..+.                         
T Consensus       148 v~--~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~-------------------------  200 (339)
T KOG0280|consen  148 VY--ETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT-------------------------  200 (339)
T ss_pred             Ee--cceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc-------------------------
Confidence            54  22344555667889999999999976 446889999999999999984221                         


Q ss_pred             CCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecc-cCceeEEEECCeeeEEEEECCCC--CEEEEeeCCCc
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAE-LGGMKSEIVGNKSFFDVHYSPLS--KLVITASADKQ  338 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~i~~~~~~p~~--~~l~~g~~dg~  338 (391)
                        -.....+.|...|.++.-+|.  ..+++|+.|-.|++||.+ .++++..-...+.|+.+.++|.-  .+|+++-.+| 
T Consensus       201 --~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-  277 (339)
T KOG0280|consen  201 --FIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-  277 (339)
T ss_pred             --eeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecchhhhHHHHHHHhcC-
Confidence              112224568889999988843  469999999999999999 67888887777899999999963  3444444444 


Q ss_pred             EEEEcCCCCCcc--eEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEE-EE
Q psy2107         339 IRLYDPKVKEGA--IVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVK-LW  388 (391)
Q Consensus       339 i~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~-iw  388 (391)
                      .+|-+.......  ........|.+-+..-.|.. ...+|+||+ .|..++ +|
T Consensus       278 ~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~-~~~~lATCsFYDk~~~~~W  330 (339)
T KOG0280|consen  278 AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDS-KDSFLATCSFYDKKIRQLW  330 (339)
T ss_pred             ceEEEecccccchheeeeccccccceeecccccc-ccceeeeeeccccceeeee
Confidence            666666543322  23445667888888888866 345688876 577755 77

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.44  E-value=2.1e-10  Score=103.70  Aligned_cols=205  Identities=13%  Similarity=0.122  Sum_probs=131.2

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ..|.++|.++.....+..+...+...+|   ++++++++.+..+   ..|.+||+.  ++....   +..+...+.+++|
T Consensus       170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~---Spdg~~la~~~~~~~~~~i~v~d~~--~g~~~~---~~~~~~~~~~~~~  241 (417)
T TIGR02800       170 YELQVADYDGANPQTITRSREPILSPAW---SPDGQKLAYVSFESGKPEIYVQDLA--TGQREK---VASFPGMNGAPAF  241 (417)
T ss_pred             ceEEEEcCCCCCCEEeecCCCceecccC---CCCCCEEEEEEcCCCCcEEEEEECC--CCCEEE---eecCCCCccceEE
Confidence            3688888877666667777778889999   7788888877654   478888854  332222   2334556677999


Q ss_pred             cCCCCEEEE-EeCCC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e
Q psy2107         213 SESRQQFAT-GGWDC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E  288 (391)
Q Consensus       213 ~~~~~~l~s-g~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~  288 (391)
                      +|+++.|+. .+.++  .|++||+.++.                              ...+..+........|++++ .
T Consensus       242 spDg~~l~~~~~~~~~~~i~~~d~~~~~------------------------------~~~l~~~~~~~~~~~~s~dg~~  291 (417)
T TIGR02800       242 SPDGSKLAVSLSKDGNPDIYVMDLDGKQ------------------------------LTRLTNGPGIDTEPSWSPDGKS  291 (417)
T ss_pred             CCCCCEEEEEECCCCCccEEEEECCCCC------------------------------EEECCCCCCCCCCEEECCCCCE
Confidence            999987764 44444  58888886532                              12223333444567888665 4


Q ss_pred             EEEEEC-CC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCc
Q psy2107         289 IITSSW-DH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       289 l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      |+.++. ++  .|.++|+.+++...............|+|+|++++.++.++   .|.+||+.++.   . ..+... ..
T Consensus       292 l~~~s~~~g~~~iy~~d~~~~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~---~-~~l~~~-~~  366 (417)
T TIGR02800       292 IAFTSDRGGSPQIYMMDADGGEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG---E-RVLTDT-GL  366 (417)
T ss_pred             EEEEECCCCCceEEEEECCCCCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC---e-EEccCC-CC
Confidence            655543 33  57788887766543333444567789999999999887765   78899987643   1 222222 22


Q ss_pred             EEEEEECCCCCCEEEEeeCCC
Q psy2107         363 VQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg  383 (391)
                      .....|+|++..++++...++
T Consensus       367 ~~~p~~spdg~~l~~~~~~~~  387 (417)
T TIGR02800       367 DESPSFAPNGRMILYATTRGG  387 (417)
T ss_pred             CCCceECCCCCEEEEEEeCCC
Confidence            345689995554444444333

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>KOG4497|consensus

Probab=99.43  E-value=1.9e-11  Score=98.61  Aligned_cols=210  Identities=14%  Similarity=0.191  Sum_probs=128.1

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      +..+++.+|+++|+.+.- .+.|-|..+-++..+..--..|.-+.|   ..+.. .|.....|+.|.+|++.    ..+-
T Consensus        12 ~~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW---~ads~~ilC~~yk~~~vqvwsl~----Qpew   83 (447)
T KOG4497|consen   12 PFCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEW---KADSCHILCVAYKDPKVQVWSLV----QPEW   83 (447)
T ss_pred             CceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheee---eccceeeeeeeeccceEEEEEee----ccee
Confidence            334555568999998876 788888766555544333455667888   44444 45556778999999976    2233


Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc---------------
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS---------------  260 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------  260 (391)
                      ...+.....++.+++|+|+|+.|+ +..-|-+|.+|.+.+.+....+.+..............+-               
T Consensus        84 ~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~  163 (447)
T KOG4497|consen   84 YCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQIS  163 (447)
T ss_pred             EEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHH
Confidence            445666688999999999996655 5566889999999886643322111111110000000000               


Q ss_pred             cCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      .......+..+...+-..+.+.|+|++        ..+.+||---.-.+..+...-++..++|+|.+++|+.|+.|+.+|
T Consensus       164 ~c~~W~ll~~f~~dT~DltgieWsPdg--------~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~qflavGsyD~~lr  235 (447)
T KOG4497|consen  164 SCKAWILLKEFKLDTIDLTGIEWSPDG--------NWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQFLAVGSYDQMLR  235 (447)
T ss_pred             hhHHHHHHHhcCCCcccccCceECCCC--------cEEEEecchhhheeeeeeeccceeEEEeccccceEEeeccchhhh
Confidence            001111122223334445677777654        345567643333333444445788999999999999999999998


Q ss_pred             EEc
Q psy2107         341 LYD  343 (391)
Q Consensus       341 iwd  343 (391)
                      +.+
T Consensus       236 vln  238 (447)
T KOG4497|consen  236 VLN  238 (447)
T ss_pred             hhc
Confidence            864

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.43  E-value=3.1e-10  Score=102.81  Aligned_cols=210  Identities=10%  Similarity=0.043  Sum_probs=129.0

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVTVS  213 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~  213 (391)
                      .|.++|.++.....+..+...+....|   +|+++.|+..+.+   ..|.+|++.  ++..+.+..   ..+.+...+|+
T Consensus       180 ~l~~~d~~g~~~~~l~~~~~~~~~p~w---SpDG~~la~~s~~~~~~~l~~~~l~--~g~~~~l~~---~~g~~~~~~~S  251 (430)
T PRK00178        180 TLQRSDYDGARAVTLLQSREPILSPRW---SPDGKRIAYVSFEQKRPRIFVQNLD--TGRREQITN---FEGLNGAPAWS  251 (430)
T ss_pred             EEEEECCCCCCceEEecCCCceeeeeE---CCCCCEEEEEEcCCCCCEEEEEECC--CCCEEEccC---CCCCcCCeEEC
Confidence            488888887776777677888999999   7788888766543   357777754  333333322   23445578999


Q ss_pred             CCCCEEE-EEeCCC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E
Q psy2107         214 ESRQQFA-TGGWDC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I  289 (391)
Q Consensus       214 ~~~~~l~-sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l  289 (391)
                      |+|+.|+ +.+.+|  .|.+||+.++..                              ..+..+........|+|++. +
T Consensus       252 pDG~~la~~~~~~g~~~Iy~~d~~~~~~------------------------------~~lt~~~~~~~~~~~spDg~~i  301 (430)
T PRK00178        252 PDGSKLAFVLSKDGNPEIYVMDLASRQL------------------------------SRVTNHPAIDTEPFWGKDGRTL  301 (430)
T ss_pred             CCCCEEEEEEccCCCceEEEEECCCCCe------------------------------EEcccCCCCcCCeEECCCCCEE
Confidence            9999887 444455  577888875331                              22333444456678996654 5


Q ss_pred             EEEEC-CC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-C--cEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         290 ITSSW-DH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-K--QIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       290 ~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-g--~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                      +..+. ++  .|.++|+.+++...............|+|+|++|+..+.+ +  .|.+||+.++...    .+. +....
T Consensus       302 ~f~s~~~g~~~iy~~d~~~g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~----~lt-~~~~~  376 (430)
T PRK00178        302 YFTSDRGGKPQIYKVNVNGGRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVR----ILT-DTSLD  376 (430)
T ss_pred             EEEECCCCCceEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEE----Ecc-CCCCC
Confidence            54443 33  5777788777654332222233457899999998876643 2  5888998775422    121 11122


Q ss_pred             EEEEECCCCCCEEEEeeCCCc--EEEEe
Q psy2107         364 QSVRWSPIDPQLFVSASFDNS--VKLWD  389 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~--v~iwd  389 (391)
                      ....|+|++..++++...+|.  +.+++
T Consensus       377 ~~p~~spdg~~i~~~~~~~g~~~l~~~~  404 (430)
T PRK00178        377 ESPSVAPNGTMLIYATRQQGRGVLMLVS  404 (430)
T ss_pred             CCceECCCCCEEEEEEecCCceEEEEEE
Confidence            356899966555555544444  44444

>KOG1409|consensus

Probab=99.41  E-value=5.7e-11  Score=96.47  Aligned_cols=183  Identities=16%  Similarity=0.269  Sum_probs=131.6

Q ss_pred             CCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC--CEEEEEECCCeEEEEcCC-----CceEEeccCCCCCeeEEE
Q psy2107          90 ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN--DWILTGCYDHSVHIWTRR-----GEHKLNIPGHGGPVKGVA  162 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~-----~~~~~~~~~~~~~v~~l~  162 (391)
                      .+.+..+++|-.......-+.....-..+++++.+..  ..|+.|-..|++.-+.+.     .........|...+..+-
T Consensus        42 ~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~i  121 (404)
T KOG1409|consen   42 VSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIV  121 (404)
T ss_pred             ccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEE
Confidence            4567788888766554443433444556788999984  488889999999988662     233445567888888888


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEee--------------------------------------cCCCCceeEEEEEecCC
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEW--------------------------------------KVESNSIECIHVCRGHE  204 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~--------------------------------------~~~~~~~~~~~~~~~~~  204 (391)
                      |   +.....+++.+.|..+. |-.                                      +........+..+.+|.
T Consensus       122 f---~~~~e~V~s~~~dk~~~-~hc~e~~~~lg~Y~~~~~~t~~~~d~~~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~  197 (404)
T KOG1409|consen  122 F---SLTHEWVLSTGKDKQFA-WHCTESGNRLGGYNFETPASALQFDALYAFVGDHSGQITMLKLEQNGCQLITTFNGHT  197 (404)
T ss_pred             e---cCCceeEEEeccccceE-EEeeccCCcccceEeeccCCCCceeeEEEEecccccceEEEEEeecCCceEEEEcCcc
Confidence            8   44555666666655432 210                                      01122344567778999


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      +.+.+++|.+....|.+|..|..+.+||+-..+                            .....+.+|...|..+.+.
T Consensus       198 ~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~----------------------------g~~~el~gh~~kV~~l~~~  249 (404)
T KOG1409|consen  198 GEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRK----------------------------GTAYELQGHNDKVQALSYA  249 (404)
T ss_pred             cceEEEEEcCCCcEEEeccccCceEEEeccCCc----------------------------ceeeeeccchhhhhhhhhh
Confidence            999999999999999999999999999995422                            2455677899999998887


Q ss_pred             c-CCeEEEEECCCeEEEEecc
Q psy2107         285 A-VDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       285 ~-~~~l~s~~~dg~i~iwd~~  304 (391)
                      + ...+++++.||.|.+|+.+
T Consensus       250 ~~t~~l~S~~edg~i~~w~mn  270 (404)
T KOG1409|consen  250 QHTRQLISCGEDGGIVVWNMN  270 (404)
T ss_pred             hhheeeeeccCCCeEEEEecc
Confidence            4 4569999999999999973

>KOG1064|consensus

Probab=99.41  E-value=1.5e-12  Score=125.83  Aligned_cols=186  Identities=14%  Similarity=0.237  Sum_probs=144.2

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      |-..|.++.-+  ..+.+||+.||.+++|.. .+..+.... .-...|+.+.|   +..|+.+..+..||.+.+|...  
T Consensus      2207 ~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f---~~qGnk~~i~d~dg~l~l~q~~-- 2281 (2439)
T KOG1064|consen 2207 PVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRF---NHQGNKFGIVDGDGDLSLWQAS-- 2281 (2439)
T ss_pred             ccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhh---cccCCceeeeccCCceeecccC--
Confidence            34556666655  348999999999999998 455555433 22378999999   6688999999999999999843  


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGG---WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                         .++....+.|......+.|-.  ..+++++   .++.+.+||..-...                          ...
T Consensus      2282 ---pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~--------------------------~s~ 2330 (2439)
T KOG1064|consen 2282 ---PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPM--------------------------NSL 2330 (2439)
T ss_pred             ---CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcc--------------------------cce
Confidence               456677788999988888876  4567664   468999999753221                          223


Q ss_pred             eeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         268 LITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      +.  ..|.+.++++++.|.. .|++|+.+|.|++||++..+.+.+++.        +. ...++++|+..|.|+||++..
T Consensus      2331 v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--------~~-~~~~f~~~ss~g~ikIw~~s~ 2399 (2439)
T KOG1064|consen 2331 VH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--------LD-TREYFVTGSSEGNIKIWRLSE 2399 (2439)
T ss_pred             ee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh--------hh-hhheeeccCcccceEEEEccc
Confidence            33  7899999999999765 489999999999999999888777665        33 567999999999999999875


Q ss_pred             C
Q psy2107         347 K  347 (391)
Q Consensus       347 ~  347 (391)
                      .
T Consensus      2400 ~ 2400 (2439)
T KOG1064|consen 2400 F 2400 (2439)
T ss_pred             c
Confidence            4

>KOG4547|consensus

Probab=99.38  E-value=4.6e-10  Score=97.67  Aligned_cols=188  Identities=13%  Similarity=0.195  Sum_probs=141.1

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEE-ecc---CCCCCeeEEEEEec-----------------CCCCeEEEEEeCCCcEEE
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKL-NIP---GHGGPVKGVAWLYN-----------------DGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~-~~~---~~~~~v~~l~~~~~-----------------~~~~~~l~s~~~dg~v~i  184 (391)
                      ..++|....||.+++|+....++. .+.   .-.+...+..|.-.                 +.+...++-|...|.|.+
T Consensus         5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~   84 (541)
T KOG4547|consen    5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL   84 (541)
T ss_pred             hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence            468999999999999998443333 222   23455666666311                 334567888999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      |+..  .+.......-.+|.+.|.++.++.+-..|.+++.|+.+..|+...                             
T Consensus        85 ys~~--~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~-----------------------------  133 (541)
T KOG4547|consen   85 YSVA--GGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKE-----------------------------  133 (541)
T ss_pred             EEec--CCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEeccc-----------------------------
Confidence            9954  333333333357999999999999999999999999999999976                             


Q ss_pred             CCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-----CCEEEEe-eCC
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL-----SKLVITA-SAD  336 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~-----~~~l~~g-~~d  336 (391)
                      ...+..+......+.+++.+|++. +++++  +.|++||+++.+.+.+|.+|. +|.++.|.-.     |.+++++ ..+
T Consensus       134 ~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~  211 (541)
T KOG4547|consen  134 KVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAE  211 (541)
T ss_pred             ceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccc
Confidence            345667777888899999997654 55554  789999999999999999987 8888888766     6666654 445


Q ss_pred             CcEEEEcCCC
Q psy2107         337 KQIRLYDPKV  346 (391)
Q Consensus       337 g~i~iwd~~~  346 (391)
                      ..+.+|-+..
T Consensus       212 r~i~~w~v~~  221 (541)
T KOG4547|consen  212 RGITVWVVEK  221 (541)
T ss_pred             cceeEEEEEc
Confidence            6677886654

>KOG0309|consensus

Probab=99.37  E-value=1e-11  Score=110.47  Aligned_cols=239  Identities=17%  Similarity=0.301  Sum_probs=171.1

Q ss_pred             EEEEEec----CCEEEEEECCCeEEEEcCC---C-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         119 VSAIDFH----NDWILTGCYDHSVHIWTRR---G-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       119 V~~~~~~----~~~l~t~~~dg~i~iwd~~---~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      |-.+.|+    -++-++......-.+|++.   . .....+.+|+.+|+.+.|.|.+|+  .+++++.|-.+..||++..
T Consensus        70 vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pd--Vlatcsvdt~vh~wd~rSp  147 (1081)
T KOG0309|consen   70 VADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPD--VLATCSVDTYVHAWDMRSP  147 (1081)
T ss_pred             hcceecccCCCCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCc--ceeeccccccceeeeccCC
Confidence            5556666    2355555555567789872   2 223356699999999999876554  8999999999999997633


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                         ..++.....-...-..++|+.....+++.+..+.|.+||.+.+.                            .++..
T Consensus       148 ---~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs----------------------------~pl~s  196 (1081)
T KOG0309|consen  148 ---HRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS----------------------------TPLCS  196 (1081)
T ss_pred             ---CcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC----------------------------cceEE
Confidence               24455555555677889998866667777777889999998644                            38889


Q ss_pred             ecCccCcccEEEec--cCCeEEEEECCCeEEEEecccCc--eeEEEECCeeeEEEEECCCCCEEEE--eeCCCcEEEEcC
Q psy2107         271 LKGHKEAISAVQWT--AVDEIITSSWDHTLKIWDAELGG--MKSEIVGNKSFFDVHYSPLSKLVIT--ASADKQIRLYDP  344 (391)
Q Consensus       271 ~~~~~~~v~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~i~~~~~~p~~~~l~~--g~~dg~i~iwd~  344 (391)
                      +++|...|..+.|.  -.+.+.+++.|++|+.||.....  ...+.....++..-.+.|-|.-.++  --.+..+.+++.
T Consensus       197 ~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c  276 (1081)
T KOG0309|consen  197 LKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRC  276 (1081)
T ss_pred             ecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccc
Confidence            99999999999998  45679999999999999987543  3445555668888888886653322  112334555443


Q ss_pred             CCC-------CcceEEEEeccccCcEEEEEECCC---------CCCEEEEeeCCCcEEEEec
Q psy2107         345 KVK-------EGAIVKSTFSSHKEWVQSVRWSPI---------DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       345 ~~~-------~~~~~~~~~~~h~~~v~~~~~~~~---------~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..       .....+..+.||...|....|-..         ....|+|-+.|.++++|-+
T Consensus       277 ~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI  338 (1081)
T KOG0309|consen  277 ENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPI  338 (1081)
T ss_pred             cchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeec
Confidence            321       134477899999998887777541         2357999999999999965

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.36  E-value=1.2e-09  Score=98.78  Aligned_cols=211  Identities=12%  Similarity=0.122  Sum_probs=126.3

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CC--cEEEEeecCCCCceeEEEEEecCCCCeEEEEEc
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQ--TAMIWEWKVESNSIECIHVCRGHERGLETVTVS  213 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~  213 (391)
                      .|.++|.++.....+..+...+.+..|   +|+++.|+..+. ++  .|.+||+.  ++....+..+.   +.....+|+
T Consensus       199 ~l~i~d~dG~~~~~l~~~~~~~~~p~w---SPDG~~La~~s~~~g~~~L~~~dl~--tg~~~~lt~~~---g~~~~~~wS  270 (448)
T PRK04792        199 QLMIADYDGYNEQMLLRSPEPLMSPAW---SPDGRKLAYVSFENRKAEIFVQDIY--TQVREKVTSFP---GINGAPRFS  270 (448)
T ss_pred             EEEEEeCCCCCceEeecCCCcccCceE---CCCCCEEEEEEecCCCcEEEEEECC--CCCeEEecCCC---CCcCCeeEC
Confidence            677778877666666677888999999   778887776554 34  46666643  33333333332   334578999


Q ss_pred             CCCCEEEE-EeCCCc--EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E
Q psy2107         214 ESRQQFAT-GGWDCL--LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I  289 (391)
Q Consensus       214 ~~~~~l~s-g~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l  289 (391)
                      |+|+.|+. .+.+|.  |.++|+.+++                              ...+..+........|+|++. +
T Consensus       271 PDG~~La~~~~~~g~~~Iy~~dl~tg~------------------------------~~~lt~~~~~~~~p~wSpDG~~I  320 (448)
T PRK04792        271 PDGKKLALVLSKDGQPEIYVVDIATKA------------------------------LTRITRHRAIDTEPSWHPDGKSL  320 (448)
T ss_pred             CCCCEEEEEEeCCCCeEEEEEECCCCC------------------------------eEECccCCCCccceEECCCCCEE
Confidence            99998765 566665  6667775532                              223333444556788997664 5


Q ss_pred             EEEE-CCC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC-CC--cEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         290 ITSS-WDH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA-DK--QIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       290 ~s~~-~dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~-dg--~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                      +..+ .++  .|.++|+.+++..............+|+|+|++|+..+. ++  .|.++|+.++.   .. .+... ...
T Consensus       321 ~f~s~~~g~~~Iy~~dl~~g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~---~~-~lt~~-~~d  395 (448)
T PRK04792        321 IFTSERGGKPQIYRVNLASGKVSRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGA---MQ-VLTST-RLD  395 (448)
T ss_pred             EEEECCCCCceEEEEECCCCCEEEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCC---eE-EccCC-CCC
Confidence            4443 334  466677777765432222222345789999998877654 34  45567776654   21 22211 112


Q ss_pred             EEEEECCCCCCEEEEeeCCCc--EEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDNS--VKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~--v~iwdl  390 (391)
                      ....|+|++..++++...+|.  +.++++
T Consensus       396 ~~ps~spdG~~I~~~~~~~g~~~l~~~~~  424 (448)
T PRK04792        396 ESPSVAPNGTMVIYSTTYQGKQVLAAVSI  424 (448)
T ss_pred             CCceECCCCCEEEEEEecCCceEEEEEEC
Confidence            345799966666666666655  445443

>KOG0280|consensus

Probab=99.36  E-value=9.4e-11  Score=93.25  Aligned_cols=203  Identities=13%  Similarity=0.134  Sum_probs=135.4

Q ss_pred             CCeEEEEcCCCceEE---ec-cCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecC---C--
Q psy2107         135 DHSVHIWTRRGEHKL---NI-PGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGH---E--  204 (391)
Q Consensus       135 dg~i~iwd~~~~~~~---~~-~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~--  204 (391)
                      .|.+.+|++......   .+ ......+..+.|.-...++. .++-+..+|.|.++.....    .....+.+-   .  
T Consensus        45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~----~ss~~L~~ls~~ki~  120 (339)
T KOG0280|consen   45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDED----ESSVHLRGLSSKKIS  120 (339)
T ss_pred             ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccc----eeeeeecccchhhhh
Confidence            467888887332211   11 12345677788865444555 5667778899999975421    111222221   1  


Q ss_pred             -CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe
Q psy2107         205 -RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW  283 (391)
Q Consensus       205 -~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  283 (391)
                       ....++.|++.+..++++-.+|.+.+-+.....                           .+.++.++.|.-......|
T Consensus       121 ~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~---------------------------le~vq~wk~He~E~Wta~f  173 (339)
T KOG0280|consen  121 VVEALSLDISTSGTKIFVSDSRGSISGVYETEMV---------------------------LEKVQTWKVHEFEAWTAKF  173 (339)
T ss_pred             heeeeEEEeeccCceEEEEcCCCcEEEEecceee---------------------------eeecccccccceeeeeeec
Confidence             124578899999999999999999855543211                           2345578899999999999


Q ss_pred             c--cCCeEEEEECCCeEEEEecccC-ceeEE--EECCeeeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         284 T--AVDEIITSSWDHTLKIWDAELG-GMKSE--IVGNKSFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       284 ~--~~~~l~s~~~dg~i~iwd~~~~-~~~~~--~~~~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      +  ..+.+++|+.|+.+..||++.. +.+..  ..+...|.++.-+|. +.++++|+.|..|++||.|....+....   
T Consensus       174 ~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~---  250 (339)
T KOG0280|consen  174 SDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA---  250 (339)
T ss_pred             ccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC---
Confidence            8  4477999999999999999933 33322  224457888877764 7799999999999999998643322211   


Q ss_pred             cccCcEEEEEECCC
Q psy2107         358 SHKEWVQSVRWSPI  371 (391)
Q Consensus       358 ~h~~~v~~~~~~~~  371 (391)
                      .-.+.|+.+.++|.
T Consensus       251 ~v~GGVWRi~~~p~  264 (339)
T KOG0280|consen  251 KVGGGVWRIKHHPE  264 (339)
T ss_pred             ccccceEEEEecch
Confidence            23377999999984

>KOG1064|consensus

Probab=99.35  E-value=7.2e-12  Score=121.28  Aligned_cols=186  Identities=19%  Similarity=0.364  Sum_probs=139.5

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA  233 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~  233 (391)
                      +-..|.++.-   +|...+.++|+.||.|++|.+..  +.........+. ..|+.+.|+.+|+.+..+..||.+.+|..
T Consensus      2207 ~v~~v~r~~s---Hp~~~~Yltgs~dgsv~~~~w~~--~~~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~ 2280 (2439)
T KOG1064|consen 2207 PVENVRRMTS---HPSDPYYLTGSQDGSVRMFEWGH--GQQVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQA 2280 (2439)
T ss_pred             ccCceeeecC---CCCCceEEecCCCceEEEEeccC--CCeEEEeeccCc-chhhhhhhcccCCceeeeccCCceeeccc
Confidence            3445666665   55666899999999999999642  222222222233 78999999999999999999999999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEE---ECCCeEEEEecccC--ce
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS---SWDHTLKIWDAELG--GM  308 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~---~~dg~i~iwd~~~~--~~  308 (391)
                      .                              .++....+.|......+.|-. ..++++   +.++.+.+||.--.  ..
T Consensus      2281 ~------------------------------pk~~~s~qchnk~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s 2329 (2439)
T KOG1064|consen 2281 S------------------------------PKPYTSWQCHNKALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNS 2329 (2439)
T ss_pred             C------------------------------CcceeccccCCccccceeeee-hhhhccccCCCCCcccchhcccCcccc
Confidence            5                              357778889999999988886 445554   35789999996532  22


Q ss_pred             eEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         309 KSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       309 ~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ....-+...++++++.|..+.|++|+.+|.|++||++..+   +.+.++.         ++  ...++++|+..|.++||
T Consensus      2330 ~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq---l~h~~~~---------~~--~~~~f~~~ss~g~ikIw 2395 (2439)
T KOG1064|consen 2330 LVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ---LRHTFQA---------LD--TREYFVTGSSEGNIKIW 2395 (2439)
T ss_pred             eeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHH---HHHHhhh---------hh--hhheeeccCcccceEEE
Confidence            2223344589999999999999999999999999998655   4444432         33  34579999999999999


Q ss_pred             ec
Q psy2107         389 DL  390 (391)
Q Consensus       389 dl  390 (391)
                      ++
T Consensus      2396 ~~ 2397 (2439)
T KOG1064|consen 2396 RL 2397 (2439)
T ss_pred             Ec
Confidence            86

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.34  E-value=9.6e-10  Score=98.56  Aligned_cols=219  Identities=14%  Similarity=0.074  Sum_probs=129.3

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeE---EEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA---FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~---l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      +.|.+.|.++.....+......+..-.|   +|+++.   +++...+|.-.||-.+...+....+..+.   +.....+|
T Consensus       165 ~~l~~~d~dG~~~~~lt~~~~~~~sP~w---SPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~---g~~~~p~w  238 (428)
T PRK01029        165 GELWSVDYDGQNLRPLTQEHSLSITPTW---MHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQ---GNQLMPTF  238 (428)
T ss_pred             ceEEEEcCCCCCceEcccCCCCcccceE---ccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCC---CCccceEE
Confidence            4677788887777777666677778899   556653   33455566555555445455545554443   34456899


Q ss_pred             cCCCCEEEEEeC-CC----cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC
Q psy2107         213 SESRQQFATGGW-DC----LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD  287 (391)
Q Consensus       213 ~~~~~~l~sg~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  287 (391)
                      +|||+.|+..+. +|    .+..|++..+..                          ..+......+.......+|+|++
T Consensus       239 SPDG~~Laf~s~~~g~~di~~~~~~~~~g~~--------------------------g~~~~lt~~~~~~~~~p~wSPDG  292 (428)
T PRK01029        239 SPRKKLLAFISDRYGNPDLFIQSFSLETGAI--------------------------GKPRRLLNEAFGTQGNPSFSPDG  292 (428)
T ss_pred             CCCCCEEEEEECCCCCcceeEEEeecccCCC--------------------------CcceEeecCCCCCcCCeEECCCC
Confidence            999988876553 23    334466543210                          11122222222344678999776


Q ss_pred             e-EEEEE-CCCeEEEE--eccc-CceeEEEEC-CeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEecc
Q psy2107         288 E-IITSS-WDHTLKIW--DAEL-GGMKSEIVG-NKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       288 ~-l~s~~-~dg~i~iw--d~~~-~~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~  358 (391)
                      . |+..+ .+|...+|  ++.. +.....+.. ...+....|+|+|+.|+..+.+   ..|++||+.+++   .. .+..
T Consensus       293 ~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~---~~-~Lt~  368 (428)
T PRK01029        293 TRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR---DY-QLTT  368 (428)
T ss_pred             CEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC---eE-EccC
Confidence            5 55554 46655555  4432 222333333 2356788999999988876543   469999998765   22 2332


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCC--CcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFD--NSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~d--g~v~iwdl  390 (391)
                      ....+....|+|++..+++++..+  ..|.+||+
T Consensus       369 ~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl  402 (428)
T PRK01029        369 SPENKESPSWAIDSLHLVYSAGNSNESELYLISL  402 (428)
T ss_pred             CCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence            334567899999655555455443  45777775

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.34  E-value=5.7e-09  Score=91.26  Aligned_cols=259  Identities=14%  Similarity=0.158  Sum_probs=137.5

Q ss_pred             EEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEEEEeecCCCCceeE
Q psy2107         121 AIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       121 ~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~  196 (391)
                      .+.|+  ++++++++.||.|.++|+ +.+.+.++. -......+++   ++++++++++. .++.+.++|..    +.+.
T Consensus        41 ~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~-~G~~~~~i~~---s~DG~~~~v~n~~~~~v~v~D~~----tle~  112 (369)
T PF02239_consen   41 GLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIK-VGGNPRGIAV---SPDGKYVYVANYEPGTVSVIDAE----TLEP  112 (369)
T ss_dssp             EEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE--SSEEEEEEE-----TTTEEEEEEEETTEEEEEETT----T--E
T ss_pred             EEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEe-cCCCcceEEE---cCCCCEEEEEecCCCceeEeccc----cccc
Confidence            35565  678999999999999999 455555555 3455678999   67888887665 68999999943    4555


Q ss_pred             EEEEecC-------CCCeEEEEEcCCCCEEEEEeCC-CcEEEEECCCCCCCCC--C-----------CCCCCC-Cccc-c
Q psy2107         197 IHVCRGH-------ERGLETVTVSESRQQFATGGWD-CLLKIWSADISKERGD--P-----------SENGDE-GTTS-K  253 (391)
Q Consensus       197 ~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~--~-----------~~~~~~-~~~~-~  253 (391)
                      +..+...       ...+..+..+|.+..++..-.| +.|.+-|....+....  .           .+.+.- .... .
T Consensus       113 v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~  192 (369)
T PF02239_consen  113 VKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANG  192 (369)
T ss_dssp             EEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGG
T ss_pred             eeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCcccceeeecccc
Confidence            6555432       3467788888888866665554 7777777655322100  0           000000 0000 0


Q ss_pred             ccccccccCCCCCceeeec----CccCcccEE-------Eec--cCCe-EEEEECCCeEEEEecccCceeEEEECCeeeE
Q psy2107         254 KRKKEYSSASSRTPLITLK----GHKEAISAV-------QWT--AVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFF  319 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~----~~~~~v~~~-------~~~--~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~  319 (391)
                      .......+....+.+..+.    .|..++..+       .|.  ..+. .++.-....+.+||....+.+.++...+.-.
T Consensus       193 sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~gl  272 (369)
T PF02239_consen  193 SNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGGL  272 (369)
T ss_dssp             GTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS-
T ss_pred             cceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeEEEEEECCCCcc
Confidence            0000011222222222221    122222211       121  0111 2222223345567777777777777666446


Q ss_pred             EEEECCCCCEEEEe----eCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCCCEEEEeeCCC-cEEEEec
Q psy2107         320 DVHYSPLSKLVITA----SADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSASFDN-SVKLWDL  390 (391)
Q Consensus       320 ~~~~~p~~~~l~~g----~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg-~v~iwdl  390 (391)
                      -+..+|+++++.+.    ...+.|.++|.++.+   ....+... ...+.++.|++++....+|.-.++ .|.|||-
T Consensus       273 Fi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~---~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~  346 (369)
T PF02239_consen  273 FIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLK---VVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDA  346 (369)
T ss_dssp             -EE--TT-SEEEEE-TT-SSHT-EEEEECCGTE---EEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEET
T ss_pred             eeecCCCCccEEeeccCCCCCceEEEEECcCcc---eeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEEC
Confidence            77889999999987    445899999988764   55555422 235999999997776666666555 8999985

...

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.34  E-value=1.2e-08  Score=89.22  Aligned_cols=242  Identities=12%  Similarity=0.154  Sum_probs=147.9

Q ss_pred             EEEec--CCEEEEEEC----CCeEEEEcCCC--ceEE---eccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEEEEeec
Q psy2107         121 AIDFH--NDWILTGCY----DHSVHIWTRRG--EHKL---NIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAMIWEWK  188 (391)
Q Consensus       121 ~~~~~--~~~l~t~~~----dg~i~iwd~~~--~~~~---~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~iwd~~  188 (391)
                      .++++  +++|++...    +|.|..|.+..  ..+.   ...........+++   ++++.+++++. .+|.|.++++.
T Consensus        41 ~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~---~~~g~~l~vany~~g~v~v~~l~  117 (345)
T PF10282_consen   41 WLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAV---DPDGRFLYVANYGGGSVSVFPLD  117 (345)
T ss_dssp             CEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEE---CTTSSEEEEEETTTTEEEEEEEC
T ss_pred             eEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEE---ecCCCEEEEEEccCCeEEEEEcc
Confidence            34554  677777766    57899998733  2222   33323444556777   77888888776 48999999986


Q ss_pred             CCCCceeEEEEEe----------cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         189 VESNSIECIHVCR----------GHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       189 ~~~~~~~~~~~~~----------~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      ....-......+.          .......++.++|+++++++... ...|.+|+++.....                  
T Consensus       118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~------------------  179 (345)
T PF10282_consen  118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGK------------------  179 (345)
T ss_dssp             TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-T------------------
T ss_pred             CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCce------------------
Confidence            4322222222221          12345789999999998887643 357999999753310                  


Q ss_pred             ccccCCCCCceeeec-CccCcccEEEeccCCe-EE-EEECCCeEEEEecc--cCc--eeEEEECC-------eeeEEEEE
Q psy2107         258 EYSSASSRTPLITLK-GHKEAISAVQWTAVDE-II-TSSWDHTLKIWDAE--LGG--MKSEIVGN-------KSFFDVHY  323 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~-s~~~dg~i~iwd~~--~~~--~~~~~~~~-------~~i~~~~~  323 (391)
                             ......+. .....-..+.|++++. ++ +.-.++.|.++++.  ++.  .+..+..-       .....+++
T Consensus       180 -------l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~i  252 (345)
T PF10282_consen  180 -------LTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAI  252 (345)
T ss_dssp             -------EEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE
T ss_pred             -------EEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEE
Confidence                   00111222 2344567899997654 44 44568899999988  442  22333221       14678999


Q ss_pred             CCCCCEEEEee-CCCcEEEEcCCCCC-cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         324 SPLSKLVITAS-ADKQIRLYDPKVKE-GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       324 ~p~~~~l~~g~-~dg~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+|++|.++. ..+.|.+|++.... ....+..........+.++++|++..++++.-.++.|.+|++
T Consensus       253 spdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~  321 (345)
T PF10282_consen  253 SPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDI  321 (345)
T ss_dssp             -TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEE
T ss_pred             ecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEE
Confidence            99999887765 56789999984332 222334444444568999999966655556667789999875

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>KOG2315|consensus

Probab=99.30  E-value=1.2e-09  Score=94.47  Aligned_cols=228  Identities=11%  Similarity=0.201  Sum_probs=143.2

Q ss_pred             EEEec-CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-----EEeCCCcEEEEeecCCCCce
Q psy2107         121 AIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-----SVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       121 ~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~  194 (391)
                      +..|+ .+.+++=-..+.+.+|+..+.....-.-|...|..+.++|. +....+|     ..+.-+.|++|.+.... ..
T Consensus       130 ~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpg-p~~~~vAvyvPe~kGaPa~vri~~~~~~~-~~  207 (566)
T KOG2315|consen  130 VPQFSIDESLAARLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPG-PEPPFVAVYVPEKKGAPASVRIYKYPEEG-QH  207 (566)
T ss_pred             ccccccchhhhhhhhcceEEEEecCCccceeeeeeccceeeEEecCC-CCCceEEEEccCCCCCCcEEEEecccccc-cc
Confidence            66777 44555555667899999865444444446778888998663 2233444     34566789999864111 11


Q ss_pred             eEE--EEEecCCCCeEEEEEcCCCCEE-EEEeC--C---------CcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         195 ECI--HVCRGHERGLETVTVSESRQQF-ATGGW--D---------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       195 ~~~--~~~~~~~~~v~~l~~~~~~~~l-~sg~~--d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      ..+  +.|.  ...=..+.|++-|.-| +.++.  |         ..+++.+++.                         
T Consensus       208 ~~~a~ksFF--kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g-------------------------  260 (566)
T KOG2315|consen  208 QPVANKSFF--KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG-------------------------  260 (566)
T ss_pred             chhhhcccc--ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC-------------------------
Confidence            111  1221  2334567888876533 22222  2         2455555542                         


Q ss_pred             cCCCCCceeeecCccCcccEEEeccCCe---EEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-  336 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-  336 (391)
                          ......+ ...++|.++.|++++.   ++-|-.-..+.|||++ +.++..+ ..++-+++-|+|.|++++.++.+ 
T Consensus       261 ----~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df-~egpRN~~~fnp~g~ii~lAGFGN  333 (566)
T KOG2315|consen  261 ----ESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF-PEGPRNTAFFNPHGNIILLAGFGN  333 (566)
T ss_pred             ----ceEEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC-CCCCccceEECCCCCEEEEeecCC
Confidence                1122222 2478999999997764   4445567889999986 4555444 34566789999999998887654 


Q ss_pred             --CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC------CCcEEEEec
Q psy2107         337 --KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF------DNSVKLWDL  390 (391)
Q Consensus       337 --g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~v~iwdl  390 (391)
                        |.|-|||+...+   ++..+..-.  -+-..|+|+ +.+++|+..      |+.++||+.
T Consensus       334 L~G~mEvwDv~n~K---~i~~~~a~~--tt~~eW~Pd-Ge~flTATTaPRlrvdNg~Kiwhy  389 (566)
T KOG2315|consen  334 LPGDMEVWDVPNRK---LIAKFKAAN--TTVFEWSPD-GEYFLTATTAPRLRVDNGIKIWHY  389 (566)
T ss_pred             CCCceEEEeccchh---hccccccCC--ceEEEEcCC-CcEEEEEeccccEEecCCeEEEEe
Confidence              799999998755   555655433  466799995 456666653      788999985

>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB

Probab=99.30  E-value=1.5e-09  Score=98.20  Aligned_cols=217  Identities=10%  Similarity=0.100  Sum_probs=131.6

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCc-
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQT-  181 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~-  181 (391)
                      ...+..+...+...+|+  |++|+.++.+   ..|++||+.+.....+..+.+.+.+++|   +++++.|+ +.+.++. 
T Consensus       182 ~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~---spDg~~l~~~~~~~~~~  258 (417)
T TIGR02800       182 PQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAF---SPDGSKLAVSLSKDGNP  258 (417)
T ss_pred             CEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEE---CCCCCEEEEEECCCCCc
Confidence            34444566678888887  6677776654   4799999965555555556667778899   66777555 4555554 


Q ss_pred             -EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         182 -AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       182 -v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                       |.+|++.  +...   ..+..+........|+|+++.|+..+. ++  .|.++|+.+++                    
T Consensus       259 ~i~~~d~~--~~~~---~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~--------------------  313 (417)
T TIGR02800       259 DIYVMDLD--GKQL---TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE--------------------  313 (417)
T ss_pred             cEEEEECC--CCCE---EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC--------------------
Confidence             6666643  3322   223334445567789999998876654 33  46667765422                    


Q ss_pred             ccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC---eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH---TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                                ...+..+...+....|+|++ .++.++.++   .|.+||+.++... .+..........|+|+|++|+.+
T Consensus       314 ----------~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~p~~spdg~~l~~~  382 (417)
T TIGR02800       314 ----------VRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDTGLDESPSFAPNGRMILYA  382 (417)
T ss_pred             ----------EEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCCCCCCCceECCCCCEEEEE
Confidence                      12233344556778899655 466666665   7889998875543 23322334456899999988877


Q ss_pred             eCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         334 SADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       334 ~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      +.++   .+++.+... .   ....+..+.+.+...+|
T Consensus       383 ~~~~~~~~l~~~~~~g-~---~~~~~~~~~g~~~~~~w  416 (417)
T TIGR02800       383 TTRGGRGVLGLVSTDG-R---FRARLPLGNGDVREPAW  416 (417)
T ss_pred             EeCCCcEEEEEEECCC-c---eeeECCCCCCCcCCCCC
Confidence            6654   355555332 2   22333333444554444

The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.

>PRK01029 tolB translocation protein TolB; Provisional

Probab=99.29  E-value=5.6e-09  Score=93.69  Aligned_cols=222  Identities=9%  Similarity=-0.000  Sum_probs=129.7

Q ss_pred             CCCcEEEEEecCC--E---EEEEECCC--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CC----cE
Q psy2107         115 HDDWVSAIDFHND--W---ILTGCYDH--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQ----TA  182 (391)
Q Consensus       115 h~~~V~~~~~~~~--~---l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg----~v  182 (391)
                      ....+..-.|+++  .   ++++..+|  .|.+.++.+.....+....+.....+|   +|+|+.|+..+. +|    .+
T Consensus       183 ~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~w---SPDG~~Laf~s~~~g~~di~~  259 (428)
T PRK01029        183 EHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTF---SPRKKLLAFISDRYGNPDLFI  259 (428)
T ss_pred             CCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEE---CCCCCEEEEEECCCCCcceeE
Confidence            3445556677743  3   33554454  566778866555555545555667889   778887776543 23    23


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      ..|++.... ..........+.......+|+|+|+.|+..+ .+|...+|.+.....                       
T Consensus       260 ~~~~~~~g~-~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~-----------------------  315 (428)
T PRK01029        260 QSFSLETGA-IGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE-----------------------  315 (428)
T ss_pred             EEeecccCC-CCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc-----------------------
Confidence            335543211 1122222222233456789999999887665 466656665421100                       


Q ss_pred             CCCCCceeeecCccCcccEEEeccCCe-EEEEECC---CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC--
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD---HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA--  335 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~--  335 (391)
                         ......+..+...+....|+|++. |+..+.+   ..|.+||+.+++..........+....|+|+|++|+....  
T Consensus       316 ---g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~  392 (428)
T PRK01029        316 ---GQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNS  392 (428)
T ss_pred             ---ccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCC
Confidence               011223333445667889997765 5544432   4699999998876544433345677899999998875432  


Q ss_pred             -CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         336 -DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       336 -dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                       ...|+++|+..++   .. .+....+.+...+|+|
T Consensus       393 g~~~L~~vdl~~g~---~~-~Lt~~~g~~~~p~Ws~  424 (428)
T PRK01029        393 NESELYLISLITKK---TR-KIVIGSGEKRFPSWGA  424 (428)
T ss_pred             CCceEEEEECCCCC---EE-EeecCCCcccCceecC
Confidence             3568888987655   22 2223445567788887

>KOG4190|consensus

Probab=99.27  E-value=1.2e-11  Score=106.74  Aligned_cols=206  Identities=17%  Similarity=0.266  Sum_probs=136.5

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc---eeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS---IECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      +..+.+|...|..++-.   .+.+.+++++.|.+|++|.++.+...   ..+..++..|+.+|..+.|-.+-+++++  .
T Consensus       728 L~nf~GH~~~iRai~Ai---dNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~S--c  802 (1034)
T KOG4190|consen  728 LCNFTGHQEKIRAIAAI---DNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIAS--C  802 (1034)
T ss_pred             eecccCcHHHhHHHHhc---ccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeee--c
Confidence            34566899988888764   34567999999999999998755433   3478889999999999999988877765  5


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEE-ECCCeEEEEec
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDA  303 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~dg~i~iwd~  303 (391)
                      ||.|.+||.-.++.....                        .-..-.+..+.|.|+.--....++++ +...+|+++|.
T Consensus       803 D~giHlWDPFigr~Laq~------------------------~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~Da  858 (1034)
T KOG4190|consen  803 DGGIHLWDPFIGRLLAQM------------------------EDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDA  858 (1034)
T ss_pred             cCcceeecccccchhHhh------------------------hcCcccCCCceeEecccCcchheeeeccchhhheeeec
Confidence            789999997543321100                        00000111223334332222334444 77899999999


Q ss_pred             ccCceeEEEECC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         304 ELGGMKSEIVGN------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       304 ~~~~~~~~~~~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      +.+.....++.-      .-+.+++..+.|+++++|-.+|+|.+.|.+++.   ++..++.-......++- | ..+.++
T Consensus       859 Rsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~---vINswrpmecdllqlaa-p-sdq~L~  933 (1034)
T KOG4190|consen  859 RSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGK---VINSWRPMECDLLQLAA-P-SDQALA  933 (1034)
T ss_pred             ccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCc---eeccCCcccchhhhhcC-c-hhHHHH
Confidence            998877666532      357899999999999999999999999998876   44444433322333321 2 223344


Q ss_pred             EeeCCCcEEE
Q psy2107         378 SASFDNSVKL  387 (391)
Q Consensus       378 s~~~dg~v~i  387 (391)
                      ....|.++.|
T Consensus       934 ~saldHslaV  943 (1034)
T KOG4190|consen  934 QSALDHSLAV  943 (1034)
T ss_pred             hhcccceeEe
Confidence            4444555544

>KOG2695|consensus

Probab=99.25  E-value=3.7e-11  Score=97.63  Aligned_cols=156  Identities=12%  Similarity=0.205  Sum_probs=121.7

Q ss_pred             EEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-CceeEEEEEecCCCCeE
Q psy2107         130 LTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-NSIECIHVCRGHERGLE  208 (391)
Q Consensus       130 ~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~v~  208 (391)
                      ++.+.+-.+-+-|+.+.....+. ..+.|.++.|   ...+++++.|+.+|.|..+|++... +...+.+.+. |...|+
T Consensus       228 fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf---~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rly-h~Ssvt  302 (425)
T KOG2695|consen  228 FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQF---AGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLY-HDSSVT  302 (425)
T ss_pred             ecccccceeEEEEeecccccccc-cchhHHHHHh---cccCCeeEecccCCcEEEEEeeecccCCCcceEEEE-cCcchh
Confidence            55566677888888666655555 6778999999   6667899999999999999987542 2334444443 889999


Q ss_pred             EEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec---
Q psy2107         209 TVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT---  284 (391)
Q Consensus       209 ~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---  284 (391)
                      ++..-. ++++|++.+.+|.|++||.+..+.                          ...+....+|...-.-+-++   
T Consensus       303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~--------------------------~~~V~qYeGHvN~~a~l~~~v~~  356 (425)
T KOG2695|consen  303 SLQILQFSQQKLMASDMTGKIKLYDLRATKC--------------------------KKSVMQYEGHVNLSAYLPAHVKE  356 (425)
T ss_pred             hhhhhccccceEeeccCcCceeEeeehhhhc--------------------------ccceeeeeccccccccccccccc
Confidence            998877 788999999999999999986443                          33577888886655555554   


Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCe
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK  316 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  316 (391)
                      ..+.+++++.|...|||.++.+..+.+++.+.
T Consensus       357 eeg~I~s~GdDcytRiWsl~~ghLl~tipf~~  388 (425)
T KOG2695|consen  357 EEGSIFSVGDDCYTRIWSLDSGHLLCTIPFPY  388 (425)
T ss_pred             ccceEEEccCeeEEEEEecccCceeeccCCCC
Confidence            45679999999999999999999999987654

>PRK00178 tolB translocation protein TolB; Provisional

Probab=99.24  E-value=1.2e-08  Score=92.53  Aligned_cols=218  Identities=10%  Similarity=0.087  Sum_probs=131.9

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCc--
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQT--  181 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~--  181 (391)
                      ..+..+...+....|+  |+.|+..+.+   ..|.+||+.+.....+....+.+....|   +|+++.|+ +...+|.  
T Consensus       192 ~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~---SpDG~~la~~~~~~g~~~  268 (430)
T PRK00178        192 VTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAW---SPDGSKLAFVLSKDGNPE  268 (430)
T ss_pred             eEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEE---CCCCCEEEEEEccCCCce
Confidence            3445677788888997  6677666544   3688999966555555555555667899   77787666 5555664  


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      |.+||+.  +....   .+..+........|+|+++.|+..+. +|  .|.++++.+++.                    
T Consensus       269 Iy~~d~~--~~~~~---~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~--------------------  323 (430)
T PRK00178        269 IYVMDLA--SRQLS---RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA--------------------  323 (430)
T ss_pred             EEEEECC--CCCeE---EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE--------------------
Confidence            5666643  33322   23344555677889999998776653 33  466667654331                    


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC-CC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-DH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~  334 (391)
                                ..+...........|+|++. ++..+. ++  .|.+||+.+++... +..........|+|+|++++..+
T Consensus       324 ----------~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~~~~~p~~spdg~~i~~~~  392 (430)
T PRK00178        324 ----------ERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTSLDESPSVAPNGTMLIYAT  392 (430)
T ss_pred             ----------EEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCCCCCCCceECCCCCEEEEEE
Confidence                      11111112233567886654 544443 33  58889998876533 22222223568999999888765


Q ss_pred             CC---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         335 AD---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       335 ~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      .+   ..++++++....    ...+..+.+.+...+|+|
T Consensus       393 ~~~g~~~l~~~~~~g~~----~~~l~~~~g~~~~p~ws~  427 (430)
T PRK00178        393 RQQGRGVLMLVSINGRV----RLPLPTAQGEVREPSWSP  427 (430)
T ss_pred             ecCCceEEEEEECCCCc----eEECcCCCCCcCCCccCC
Confidence            43   347777764322    233444556677888887

>KOG2041|consensus

Probab=99.22  E-value=2.7e-09  Score=95.18  Aligned_cols=266  Identities=11%  Similarity=0.205  Sum_probs=167.5

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-----c-----------eEEeccCCCCCeeEEEEEecCCCCeEEEEE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-----E-----------HKLNIPGHGGPVKGVAWLYNDGKDAAFISV  176 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-----~-----------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~  176 (391)
                      ......|++|+  ..++++|+.||.+++..+..     +           .-.++.+|++.|.-+.|   +.+...|-+.
T Consensus        13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTW---Ne~~QKLTtS   89 (1189)
T KOG2041|consen   13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTW---NENNQKLTTS   89 (1189)
T ss_pred             CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEe---cccccccccc
Confidence            34467899998  56999999999999996521     0           11246799999999999   6677789999


Q ss_pred             eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC-----------CCC
Q psy2107         177 STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP-----------SEN  245 (391)
Q Consensus       177 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-----------~~~  245 (391)
                      ..+|.|.+|-+-.+  .+-.-..-....+.|.+++|+.+|..+.....||.|.+=.++..+..+..           ++.
T Consensus        90 Dt~GlIiVWmlykg--sW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg~~l~hv~ws~D  167 (1189)
T KOG2041|consen   90 DTSGLIIVWMLYKG--SWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKGQLLAHVLWSED  167 (1189)
T ss_pred             CCCceEEEEeeecc--cHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcchheccceeeccc
Confidence            99999999975422  22111122234667899999999999999999999887766654432211           000


Q ss_pred             CCCCc--cccccccccccCC------CCCceee----ecCccCcccEEEec--------cC-CeEEEEECCCeEEEEecc
Q psy2107         246 GDEGT--TSKKRKKEYSSAS------SRTPLIT----LKGHKEAISAVQWT--------AV-DEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       246 ~~~~~--~~~~~~~~~~~~~------~~~~~~~----~~~~~~~v~~~~~~--------~~-~~l~s~~~dg~i~iwd~~  304 (391)
                      .....  ........+....      ...+...    +......|..+.|.        |+ -.|+.+-..|.+.|..-.
T Consensus       168 ~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~e  247 (1189)
T KOG2041|consen  168 LEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSE  247 (1189)
T ss_pred             HHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhc
Confidence            00000  0000001111000      0011011    11112235556664        11 248888888998887655


Q ss_pred             cCceeEEEECCeeeEEEEECCCCCEEEEeeCC---------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCE
Q psy2107         305 LGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       305 ~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  375 (391)
                      +......+...-.+....|+++|..|++++.+         +.|.+|..- +.   ...+++.....|++++|-. .+ +
T Consensus       248 ND~~Pvv~dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fysp~-G~---i~gtlkvpg~~It~lsWEg-~g-L  321 (1189)
T KOG2041|consen  248 NDPEPVVVDTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYSPY-GH---IVGTLKVPGSCITGLSWEG-TG-L  321 (1189)
T ss_pred             CCCCCeEEecccEeecceecCCCcEEEEccCcccccCccccceEEEeccc-hh---heEEEecCCceeeeeEEcC-Cc-e
Confidence            55444555555788999999999999998754         356777642 22   5667777778899999976 44 3


Q ss_pred             EEEeeCCCcEEEEecC
Q psy2107         376 FVSASFDNSVKLWDLR  391 (391)
Q Consensus       376 l~s~~~dg~v~iwdlr  391 (391)
                      =++-..|+.|.+=++|
T Consensus       322 riA~AvdsfiyfanIR  337 (1189)
T KOG2041|consen  322 RIAIAVDSFIYFANIR  337 (1189)
T ss_pred             EEEEEecceEEEEeec
Confidence            3344457888776665

>PRK04792 tolB translocation protein TolB; Provisional

Probab=99.22  E-value=1.2e-08  Score=92.32  Aligned_cols=218  Identities=11%  Similarity=0.062  Sum_probs=126.4

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEEC-CC--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCcEEEE
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCY-DH--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTAMIW  185 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~-dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~v~iw  185 (391)
                      +..+...+.+..|+  |+.|+..+. ++  .|.+||+.+.....+....+.....+|   +++++.|+ +.+.+|...+|
T Consensus       213 l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~w---SPDG~~La~~~~~~g~~~Iy  289 (448)
T PRK04792        213 LLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRF---SPDGKKLALVLSKDGQPEIY  289 (448)
T ss_pred             eecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeE---CCCCCEEEEEEeCCCCeEEE
Confidence            34456677888887  556665543 33  588889865444444333444557889   67787665 45667765555


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCc--EEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCL--LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      -++..+...   ..+..+.......+|+|+++.|+..+. ++.  |.++|+.+++.                        
T Consensus       290 ~~dl~tg~~---~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~------------------------  342 (448)
T PRK04792        290 VVDIATKAL---TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV------------------------  342 (448)
T ss_pred             EEECCCCCe---EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE------------------------
Confidence            443434332   233334556678899999998876553 444  55556654221                        


Q ss_pred             CCCCceeeecCccCcccEEEeccCCe-EEEEEC-CC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-C
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-DH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-K  337 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-g  337 (391)
                            ..+..........+|+|++. ++..+. ++  .|.++|+.+++... +..........|+|+|++|+..+.+ +
T Consensus       343 ------~~Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~~d~~ps~spdG~~I~~~~~~~g  415 (448)
T PRK04792        343 ------SRLTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTRLDESPSVAPNGTMVIYSTTYQG  415 (448)
T ss_pred             ------EEEecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCCCCCCceECCCCCEEEEEEecCC
Confidence                  11111122234568886654 444433 44  45567887776432 2222222345799999988765543 3


Q ss_pred             --cEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         338 --QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       338 --~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                        .+++++... .   ....+..+.+.+...+|+|
T Consensus       416 ~~~l~~~~~~G-~---~~~~l~~~~g~~~~p~Wsp  446 (448)
T PRK04792        416 KQVLAAVSIDG-R---FKARLPAGQGEVKSPAWSP  446 (448)
T ss_pred             ceEEEEEECCC-C---ceEECcCCCCCcCCCccCC
Confidence              367777642 2   3344555566778888987

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.21  E-value=4e-08  Score=97.26  Aligned_cols=247  Identities=13%  Similarity=0.166  Sum_probs=148.1

Q ss_pred             EEEec---CCEEEEEECCCeEEEEcCCCceEEeccC--C------------CCCeeEEEEEecCCCCeEE-EEEeCCCcE
Q psy2107         121 AIDFH---NDWILTGCYDHSVHIWTRRGEHKLNIPG--H------------GGPVKGVAWLYNDGKDAAF-ISVSTDQTA  182 (391)
Q Consensus       121 ~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~--~------------~~~v~~l~~~~~~~~~~~l-~s~~~dg~v  182 (391)
                      .++++   +.++++-+.++.|++||.++..+..+..  .            -..-..+++   +++++.| ++-..++.|
T Consensus       572 gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIav---d~~gn~LYVaDt~n~~I  648 (1057)
T PLN02919        572 KLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAY---NAKKNLLYVADTENHAL  648 (1057)
T ss_pred             eEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEE---eCCCCEEEEEeCCCceE
Confidence            34553   5577777888999999998776554432  1            112467888   4455544 444456788


Q ss_pred             EEEeecCCCCceeEEEEEecC-----------------CCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCC
Q psy2107         183 MIWEWKVESNSIECIHVCRGH-----------------ERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~-----------------~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~  244 (391)
                      +++|+.  ++.   +.++.+-                 -..-..++++| ++.++++.+.++.|++||..++...... .
T Consensus       649 r~id~~--~~~---V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~-G  722 (1057)
T PLN02919        649 REIDFV--NET---VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFS-G  722 (1057)
T ss_pred             EEEecC--CCE---EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEe-c
Confidence            888853  222   2222110                 11235789999 5666677778899999998764321000 0


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eE-EEEECCCeEEEEecccCceeEEEEC--------
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EI-ITSSWDHTLKIWDAELGGMKSEIVG--------  314 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~--------  314 (391)
                      .+..            .......  .....-.....+++++++ .+ ++-+.++.|++||+.++.......+        
T Consensus       723 ~G~~------------~~~~g~~--~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l  788 (1057)
T PLN02919        723 DGYE------------RNLNGSS--GTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNL  788 (1057)
T ss_pred             CCcc------------ccCCCCc--cccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCccc
Confidence            0000            0000000  000111235678998654 34 4556679999999987653211100        


Q ss_pred             --------------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEE----------eccccCcEEEEEECC
Q psy2107         315 --------------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKST----------FSSHKEWVQSVRWSP  370 (391)
Q Consensus       315 --------------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~----------~~~h~~~v~~~~~~~  370 (391)
                                    -.....++++++|+++++-+.++.|++||..++.-......          ..+.-.....+++++
T Consensus       789 ~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~  868 (1057)
T PLN02919        789 FKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGE  868 (1057)
T ss_pred             ccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeC
Confidence                          01235789999999888888999999999876431111100          011223578999999


Q ss_pred             CCCCEEEEeeCCCcEEEEecC
Q psy2107         371 IDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       371 ~~~~~l~s~~~dg~v~iwdlr  391 (391)
                       +++++++-+.++.|++||++
T Consensus       869 -dG~lyVaDt~Nn~Irvid~~  888 (1057)
T PLN02919        869 -NGRLFVADTNNSLIRYLDLN  888 (1057)
T ss_pred             -CCCEEEEECCCCEEEEEECC
Confidence             55789999999999999974

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.19  E-value=5.9e-10  Score=89.58  Aligned_cols=233  Identities=14%  Similarity=0.234  Sum_probs=142.5

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-CceeEEEEEecCC------------CCeEEEEEcCCC--CE
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-NSIECIHVCRGHE------------RGLETVTVSESR--QQ  218 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~------------~~v~~l~~~~~~--~~  218 (391)
                      ....|+++.|   ...|.++++|...|.|.+|.-+... -..+....+++|.            ..|..+.|..++  ..
T Consensus        25 ead~ItaVef---d~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~h  101 (460)
T COG5170          25 EADKITAVEF---DETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNH  101 (460)
T ss_pred             ccceeeEEEe---ccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcce
Confidence            3466899999   7789999999999999999732111 0122334455554            346777876543  46


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc--------ccccccc-----cccCCCCCcee-eecCccCcccEEEec
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTT--------SKKRKKE-----YSSASSRTPLI-TLKGHKEAISAVQWT  284 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~~~~-----~~~~~~~~~~~-~~~~~~~~v~~~~~~  284 (391)
                      ++..+.|.+|++|.+...........+......        +......     -.......+.+ .-..|.-.+.++.++
T Consensus       102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~N  181 (460)
T COG5170         102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFN  181 (460)
T ss_pred             EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeec
Confidence            778889999999998754321111000000000        0000000     00000011111 224678889999999


Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEE---ECCe------eeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCC-----c
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEI---VGNK------SFFDVHYSPL-SKLVITASADKQIRLYDPKVKE-----G  349 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~------~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~-----~  349 (391)
                      .+...+..+.|=.|.+|++........+   +.+.      -|++..|+|. ...+.-.+..|.|++-|++...     .
T Consensus       182 sD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~  261 (460)
T COG5170         182 SDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSK  261 (460)
T ss_pred             CchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCch
Confidence            8777777778999999998754333222   2222      4788899997 4566667789999999998421     0


Q ss_pred             ce--------EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         350 AI--------VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       350 ~~--------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..        -...+.+-...|..+.|++ +++++++-+. -+|+|||++
T Consensus       262 klfe~~~D~v~~~ff~eivsSISD~kFs~-ngryIlsRdy-ltvkiwDvn  309 (460)
T COG5170         262 KLFELTIDGVDVDFFEEIVSSISDFKFSD-NGRYILSRDY-LTVKIWDVN  309 (460)
T ss_pred             hhhhhccCcccchhHHHHhhhhcceEEcC-CCcEEEEecc-ceEEEEecc
Confidence            00        0111222345789999999 7777887765 499999975

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.16  E-value=1.3e-06  Score=72.37  Aligned_cols=251  Identities=8%  Similarity=0.114  Sum_probs=158.6

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECC---CeEEEEcCCC--ceEEe---ccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYD---HSVHIWTRRG--EHKLN---IPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~--~~~~~---~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      ......+.+..+-|+++  .+.|.++-.+   |.|.-|.++.  ..+..   ......+-..+++   ++++++++++..
T Consensus        32 ~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsv---d~~g~~vf~AnY  108 (346)
T COG2706          32 LLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSV---DEDGRFVFVANY  108 (346)
T ss_pred             hhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEE---CCCCCEEEEEEc
Confidence            34445566777788888  4467776544   6777776643  23222   2222233366777   788988887765


Q ss_pred             -CCcEEEEeecCCCCceeEEEEEecCCCC----------eEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCC
Q psy2107         179 -DQTAMIWEWKVESNSIECIHVCRGHERG----------LETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       179 -dg~v~iwd~~~~~~~~~~~~~~~~~~~~----------v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                       -|.|.++-++.. +..........|.+.          +.+..+.|++++|++.+- -..|.+|++..++...      
T Consensus       109 ~~g~v~v~p~~~d-G~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~------  181 (346)
T COG2706         109 HSGSVSVYPLQAD-GSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP------  181 (346)
T ss_pred             cCceEEEEEcccC-CccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc------
Confidence             588999987544 333333233335555          888999999999988753 2479999998655421      


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEE--EEECCCeEEEEecccC-ceeEEEE----------
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEII--TSSWDHTLKIWDAELG-GMKSEIV----------  313 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~--s~~~dg~i~iwd~~~~-~~~~~~~----------  313 (391)
                                        . ....+ .....-+.|.|+|++.++  ++=-+++|-+|..... ..+..++          
T Consensus       182 ------------------~-~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~  241 (346)
T COG2706         182 ------------------A-DPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFT  241 (346)
T ss_pred             ------------------c-ccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccC
Confidence                              1 11112 234556889999888743  3445899999998763 2222222          


Q ss_pred             CCeeeEEEEECCCCCEEEEeeC-CCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCC-CcEEEEec
Q psy2107         314 GNKSFFDVHYSPLSKLVITASA-DKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-NSVKLWDL  390 (391)
Q Consensus       314 ~~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~v~iwdl  390 (391)
                      +......+.++|+|++|.++.. ...|.+|.+....+. ........+....+...++| ++++|+.+..+ ..|.+|.+
T Consensus       242 g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~-~g~~Liaa~q~sd~i~vf~~  320 (346)
T COG2706         242 GTNWAAAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINP-SGRFLIAANQKSDNITVFER  320 (346)
T ss_pred             CCCceeEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCC-CCCEEEEEccCCCcEEEEEE
Confidence            2346778999999999998743 347888887654332 23334444555689999999 55566666554 46777653

>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3

Probab=99.15  E-value=3e-07  Score=80.52  Aligned_cols=234  Identities=12%  Similarity=0.156  Sum_probs=147.7

Q ss_pred             EEEEECC----CeEEEEcC--CCceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeC----CCcEEEEeecCCCCceeE
Q psy2107         129 ILTGCYD----HSVHIWTR--RGEHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVST----DQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       129 l~t~~~d----g~i~iwd~--~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~----dg~v~iwd~~~~~~~~~~  196 (391)
                      ++.|++.    +.|.+|.+  +...+....  ........+++   ++++++|.+...    +|.|..|++.........
T Consensus         2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~---~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~   78 (345)
T PF10282_consen    2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAV---SPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTL   78 (345)
T ss_dssp             EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE----TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEE
T ss_pred             EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEE---EeCCCEEEEEEccccCCCCEEEEEECCCcceeEE
Confidence            4566666    68998877  444433222  23344556777   677888888776    579999998755456666


Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee--c-
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL--K-  272 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-  272 (391)
                      +............++++|++++|+++. .+|.|.++++.......                         .....+  . 
T Consensus        79 ~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~-------------------------~~~~~~~~~g  133 (345)
T PF10282_consen   79 LNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLG-------------------------EVVQTVRHEG  133 (345)
T ss_dssp             EEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEE-------------------------EEEEEEESEE
T ss_pred             eeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccc-------------------------eeeeecccCC
Confidence            666664556677899999999998887 48999999997622110                         010011  0 


Q ss_pred             -------CccCcccEEEeccCCe-EEEEE-CCCeEEEEecccCc--ee--EEE--ECCeeeEEEEECCCCCEEEEe-eCC
Q psy2107         273 -------GHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGG--MK--SEI--VGNKSFFDVHYSPLSKLVITA-SAD  336 (391)
Q Consensus       273 -------~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~--~~--~~~--~~~~~i~~~~~~p~~~~l~~g-~~d  336 (391)
                             .......++.++|++. +++.. ....|.+|++....  ..  ..+  ........++|+|+++++.+. -.+
T Consensus       134 ~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s  213 (345)
T PF10282_consen  134 SGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELS  213 (345)
T ss_dssp             EESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTT
T ss_pred             CCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCC
Confidence                   1123356888997765 54443 35689999997655  32  222  233477899999999977655 457


Q ss_pred             CcEEEEcCCCCCcc-eEEEEecc------ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         337 KQIRLYDPKVKEGA-IVKSTFSS------HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       337 g~i~iwd~~~~~~~-~~~~~~~~------h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.|.+|++....+. ........      .......|+++|++..++++.-.++.|.+|++
T Consensus       214 ~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~  274 (345)
T PF10282_consen  214 NTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDL  274 (345)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEE
T ss_pred             CcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEE
Confidence            88999998732221 12222211      12268899999976666777777889999987

1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.

>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]

Probab=99.14  E-value=2.4e-09  Score=86.19  Aligned_cols=242  Identities=17%  Similarity=0.338  Sum_probs=154.3

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc------eEEeccCCC------------CCeeEEEEEecCCCCeEEE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE------HKLNIPGHG------------GPVKGVAWLYNDGKDAAFI  174 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~------~~~~~~~~~------------~~v~~l~~~~~~~~~~~l~  174 (391)
                      ..+.|+++.|.  |.++++|...|.|.+|.-...      ....+++|.            ..|..+.|..... ...++
T Consensus        25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~-r~hFL  103 (460)
T COG5170          25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTG-RNHFL  103 (460)
T ss_pred             ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCC-cceEE
Confidence            55689999998  889999999999999975321      122234443            4678899975433 33566


Q ss_pred             EEeCCCcEEEEeecCCC------------------C---------------cee-----EEEEE-ecCCCCeEEEEEcCC
Q psy2107         175 SVSTDQTAMIWEWKVES------------------N---------------SIE-----CIHVC-RGHERGLETVTVSES  215 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~------------------~---------------~~~-----~~~~~-~~~~~~v~~l~~~~~  215 (391)
                      ..+.|.+|++|.+....                  +               ...     +.+.+ ..|.-.|.++.|+.+
T Consensus       104 lstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD  183 (460)
T COG5170         104 LSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSD  183 (460)
T ss_pred             EecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCc
Confidence            66789999999864220                  0               000     00111 356777899999999


Q ss_pred             CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-----cCcccEEEeccC--Ce
Q psy2107         216 RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-----KEAISAVQWTAV--DE  288 (391)
Q Consensus       216 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~--~~  288 (391)
                      ...++++ .|=.|.+|+++....                          .-.+..++.|     ..-|++..|+|.  +.
T Consensus       184 ~et~lSa-DdLrINLWnl~i~D~--------------------------sFnIVDiKP~nmeeLteVItSaeFhp~~cn~  236 (460)
T COG5170         184 KETLLSA-DDLRINLWNLEIIDG--------------------------SFNIVDIKPHNMEELTEVITSAEFHPEMCNV  236 (460)
T ss_pred             hheeeec-cceeeeeccccccCC--------------------------ceEEEeccCccHHHHHHHHhhcccCHhHcce
Confidence            8877775 466899999865221                          1122233333     345788889853  45


Q ss_pred             EEEEECCCeEEEEecccCcee------EEEEC-----------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         289 IITSSWDHTLKIWDAELGGMK------SEIVG-----------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~------~~~~~-----------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      +.-.+..|.|++-|++.....      .....           -..|..+.|+++|+++++-+ =-+|++||++..+.+ 
T Consensus       237 fmYSsSkG~Ikl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~p-  314 (460)
T COG5170         237 FMYSSSKGEIKLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNP-  314 (460)
T ss_pred             EEEecCCCcEEehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCC-
Confidence            777888999999999853321      11111           13678899999999999765 468999999875433 


Q ss_pred             EEEEecccc------------CcE---EEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         352 VKSTFSSHK------------EWV---QSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       352 ~~~~~~~h~------------~~v---~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                       +.+..-|.            ..|   ..+.|+. +...+.+|+..+..-++
T Consensus       315 -ikTi~~h~~l~~~l~d~YEnDaifdkFeisfSg-d~~~v~sgsy~NNfgiy  364 (460)
T COG5170         315 -IKTIPMHCDLMDELNDVYENDAIFDKFEISFSG-DDKHVLSGSYSNNFGIY  364 (460)
T ss_pred             -ceeechHHHHHHHHHhhhhccceeeeEEEEecC-Ccccccccccccceeee
Confidence             33332221            122   3466777 34457777776655444

>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A

Probab=99.14  E-value=4e-08  Score=85.99  Aligned_cols=184  Identities=11%  Similarity=0.049  Sum_probs=119.2

Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      ++++-..+|.|.+.|..    +.+.+..+......-..+.++|+++++++++.||.|.++|+.+                
T Consensus         8 ~~V~~~~~~~v~viD~~----t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~----------------   67 (369)
T PF02239_consen    8 FYVVERGSGSVAVIDGA----TNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLAT----------------   67 (369)
T ss_dssp             EEEEEGGGTEEEEEETT----T-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTS----------------
T ss_pred             EEEEecCCCEEEEEECC----CCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCc----------------
Confidence            34566678999999943    4566777775544445678999999999999999999999977                


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCceeEEEECCe--------eeEEE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGMKSEIVGNK--------SFFDV  321 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~~~~~~~~~--------~i~~~  321 (391)
                                   .+.+..+... .....+++++++. ++++ ...+.+.++|.++.++++.+....        .+..+
T Consensus        68 -------------~~~v~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aI  133 (369)
T PF02239_consen   68 -------------GKVVATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAI  133 (369)
T ss_dssp             -------------SSEEEEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEE
T ss_pred             -------------ccEEEEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeE
Confidence                         3355566543 3457789996554 5545 468999999999999998887542        45677


Q ss_pred             EECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         322 HYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       322 ~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..+|....++.. -+.+.|.+.|......  +...............|+|++.+++++......|-++|.+
T Consensus       134 v~s~~~~~fVv~lkd~~~I~vVdy~d~~~--~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~  202 (369)
T PF02239_consen  134 VASPGRPEFVVNLKDTGEIWVVDYSDPKN--LKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTK  202 (369)
T ss_dssp             EE-SSSSEEEEEETTTTEEEEEETTTSSC--EEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETT
T ss_pred             EecCCCCEEEEEEccCCeEEEEEeccccc--cceeeecccccccccccCcccceeeecccccceeEEEeec
Confidence            778888855544 4458888888766432  2222333445678899999655556656666788888763

...

>KOG3914|consensus

Probab=99.14  E-value=2.1e-09  Score=89.44  Aligned_cols=157  Identities=17%  Similarity=0.126  Sum_probs=104.2

Q ss_pred             CCEEEEEECCCeEEEEcCC--C--ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         126 NDWILTGCYDHSVHIWTRR--G--EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~--~--~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      ++++|.+..+....+++..  .  .+......-...-+++.|...+......-..+....+.+|...  .   .+....-
T Consensus        74 ~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~--~---~~~~~~l  148 (390)
T KOG3914|consen   74 GRLVAVATSSKQRAVFDYRENPKGAKLLDVSCVPKRPTAISFIREDTSVLVADKAGDVYSFDILSAD--S---GRCEPIL  148 (390)
T ss_pred             ceEEEEEeCCCceEEEEEecCCCcceeeeEeecccCcceeeeeeccceEEEEeecCCceeeeeeccc--c---cCcchhh
Confidence            5577777777776666652  2  1222222223333444553323332233333444555555522  1   2334456


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV  281 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  281 (391)
                      ||-+.++.++|+||+++|+++..|..|++-......                            .......||+.-|..+
T Consensus       149 GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f----------------------------~IesfclGH~eFVS~i  200 (390)
T KOG3914|consen  149 GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF----------------------------VIESFCLGHKEFVSTI  200 (390)
T ss_pred             hhhhhhheeeecCCCCEEEEecCCceEEEEecCccc----------------------------chhhhccccHhheeee
Confidence            899999999999999999999999999997764311                            1222345799999999


Q ss_pred             EeccCCeEEEEECCCeEEEEecccCceeEEEECC
Q psy2107         282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN  315 (391)
Q Consensus       282 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~  315 (391)
                      +.-++..|++++.|++|++||+++|+.+.++...
T Consensus       201 sl~~~~~LlS~sGD~tlr~Wd~~sgk~L~t~dl~  234 (390)
T KOG3914|consen  201 SLTDNYLLLSGSGDKTLRLWDITSGKLLDTCDLS  234 (390)
T ss_pred             eeccCceeeecCCCCcEEEEecccCCcccccchh
Confidence            9998888999999999999999999998776543

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=99.13  E-value=2.4e-07  Score=79.40  Aligned_cols=242  Identities=9%  Similarity=-0.024  Sum_probs=136.4

Q ss_pred             CeEEEEcCCCce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeC----------CCcEEEEeecCCCCceeEEEEEecC-
Q psy2107         136 HSVHIWTRRGEH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVST----------DQTAMIWEWKVESNSIECIHVCRGH-  203 (391)
Q Consensus       136 g~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~-  203 (391)
                      |+|.+.|....+ +..+..-..+- .+ +   +++++.++.+..          +..|.+||..    +.+.+..+... 
T Consensus        27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~---spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~----t~~~~~~i~~p~   97 (352)
T TIGR02658        27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-V---ASDGSFFAHASTVYSRIARGKRTDYVEVIDPQ----THLPIADIELPE   97 (352)
T ss_pred             ceEEEEECCCCEEEEEEEccCCCc-ee-E---CCCCCEEEEEeccccccccCCCCCEEEEEECc----cCcEEeEEccCC
Confidence            899999995544 44444222222 23 5   667776666555          7899999954    44455544421 


Q ss_pred             ------CCCeEEEEEcCCCCEEEEEe-C-CCcEEEEECCCCCCCCCCCCCCCC-Ccccc----------ccccccccCCC
Q psy2107         204 ------ERGLETVTVSESRQQFATGG-W-DCLLKIWSADISKERGDPSENGDE-GTTSK----------KRKKEYSSASS  264 (391)
Q Consensus       204 ------~~~v~~l~~~~~~~~l~sg~-~-dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~----------~~~~~~~~~~~  264 (391)
                            ......++++|+|++|+... . +..|.+.|+.+++........... .....          ...........
T Consensus        98 ~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~~~~~~Dg~~~~v~~d~~  177 (352)
T TIGR02658        98 GPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPTANDTFFMHCRDGSLAKVGYGTK  177 (352)
T ss_pred             CchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEecCCccEEEeecCceEEEEecCC
Confidence                  12334788999999998776 3 689999999998876543222111 00000          00000000000


Q ss_pred             CC-ceee---ecCccCcccE-EEecc-CCeEEEEECCCeEEEEecccC-----ceeEEEEC--------CeeeEEEEECC
Q psy2107         265 RT-PLIT---LKGHKEAISA-VQWTA-VDEIITSSWDHTLKIWDAELG-----GMKSEIVG--------NKSFFDVHYSP  325 (391)
Q Consensus       265 ~~-~~~~---~~~~~~~v~~-~~~~~-~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~--------~~~i~~~~~~p  325 (391)
                      .+ ....   +..-..++.. -.|.+ ++..+-.+..|+|.+.|+...     .....+..        +..+.-++++|
T Consensus       178 g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~  257 (352)
T TIGR02658       178 GNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYTGKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHR  257 (352)
T ss_pred             CceEEeeeeeecCCccccccCCceEcCCCcEEEEecCCeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcC
Confidence            00 0111   1110000000 02232 455444444599999996443     22222211        12334499999


Q ss_pred             CCCEEEEee----------CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCC-CEEEEeeCCCcEEEEec
Q psy2107         326 LSKLVITAS----------ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDP-QLFVSASFDNSVKLWDL  390 (391)
Q Consensus       326 ~~~~l~~g~----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~l~s~~~dg~v~iwdl  390 (391)
                      +++.+.+..          ..+.|.++|..+.+   .+..+.. ...+..++++||+. .++++...++.|.+.|+
T Consensus       258 dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~k---vi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~  329 (352)
T TIGR02658       258 ARDRIYLLADQRAKWTHKTASRFLFVVDAKTGK---RLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDA  329 (352)
T ss_pred             CCCEEEEEecCCccccccCCCCEEEEEECCCCe---EEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEEC
Confidence            999877742          22579999988766   5555442 34689999999666 44445557889999986

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=99.12  E-value=1.1e-07  Score=92.60  Aligned_cols=239  Identities=11%  Similarity=0.209  Sum_probs=156.4

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEE----cCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIW----TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iw----d~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      ..+.|.++.|-  .+.++.+..+|.|.+.    +.....+.....-...|.+++|   +||+.+++..+.+|++.+-.-.
T Consensus        74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~W---SPD~Ella~vT~~~~l~~mt~~  150 (928)
T PF04762_consen   74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASW---SPDEELLALVTGEGNLLLMTRD  150 (928)
T ss_pred             CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEE---CCCcCEEEEEeCCCEEEEEecc
Confidence            44678888886  5578889999999999    6655555555556788999999   7789999999999988875421


Q ss_pred             CC----------C-CceeEE---------------------------------EEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         189 VE----------S-NSIECI---------------------------------HVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       189 ~~----------~-~~~~~~---------------------------------~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      .+          . +..+.+                                 ..+. +...-..++|-.||.++|+.+.
T Consensus       151 fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~  229 (928)
T PF04762_consen  151 FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSV  229 (928)
T ss_pred             ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEE
Confidence            00          0 000000                                 0011 2334567899999999998774


Q ss_pred             ---C---CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECC---
Q psy2107         225 ---D---CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD---  295 (391)
Q Consensus       225 ---d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d---  295 (391)
                         .   +.+++|+-+. ..                             ..+-..-.+--.+++|-|.|.++++..-   
T Consensus       230 ~~~~~~~R~iRVy~ReG-~L-----------------------------~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~  279 (928)
T PF04762_consen  230 EPETGSRRVIRVYSREG-EL-----------------------------QSTSEPVDGLEGALSWRPSGNLIASSQRLPD  279 (928)
T ss_pred             EcCCCceeEEEEECCCc-eE-----------------------------EeccccCCCccCCccCCCCCCEEEEEEEcCC
Confidence               2   5789998752 11                             1111111222347889988887776543   


Q ss_pred             -CeEEEEecccCceeEEEEC-----CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEE
Q psy2107         296 -HTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRW  368 (391)
Q Consensus       296 -g~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~  368 (391)
                       ..|.+|. ++|..-..|..     ...+..+.|++++..||.-..|. |.+|-..... ..+.+.+.- ....+..+.|
T Consensus       280 ~~~VvFfE-rNGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYH-WYLKqei~~~~~~~~~~~~W  356 (928)
T PF04762_consen  280 RHDVVFFE-RNGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYH-WYLKQEIRFSSSESVNFVKW  356 (928)
T ss_pred             CcEEEEEe-cCCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCE-EEEEEEEEccCCCCCCceEE
Confidence             4566665 44544444432     24789999999999999977555 9999875532 223333332 2334566999


Q ss_pred             CCCCCCEEEEeeCCCcEEEEec
Q psy2107         369 SPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|.+...|...+.+|.+..+++
T Consensus       357 dpe~p~~L~v~t~~g~~~~~~~  378 (928)
T PF04762_consen  357 DPEKPLRLHVLTSNGQYEIYDF  378 (928)
T ss_pred             CCCCCCEEEEEecCCcEEEEEE
Confidence            9988888888888788877654

>KOG4532|consensus

Probab=99.08  E-value=8.3e-08  Score=75.90  Aligned_cols=214  Identities=12%  Similarity=0.012  Sum_probs=137.2

Q ss_pred             CCEEEEEECCCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      ..+||.|+..|...+|...+..  ......|...|+-+.=...  ...-+..++.|.++++.+++......  .    .|
T Consensus        84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd--~~~~~~i~sndht~k~~~~~~~s~~~--~----~h  155 (344)
T KOG4532|consen   84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCD--LKFPLNIASNDHTGKTMVVSGDSNKF--A----VH  155 (344)
T ss_pred             ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcc--cccceeeccCCcceeEEEEecCcccc--e----ee
Confidence            4489999999999999985332  2233344443332221100  11236677889999998865333221  1    12


Q ss_pred             CC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee-eecCccCcccE
Q psy2107         204 ER--GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI-TLKGHKEAISA  280 (391)
Q Consensus       204 ~~--~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~  280 (391)
                      ..  .+.+++++++++++++.+....|..|.++....                           ..+. .....+..-.+
T Consensus       156 ~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~se---------------------------y~~~~~~a~t~D~gF~  208 (344)
T KOG4532|consen  156 NQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESE---------------------------YIENIYEAPTSDHGFY  208 (344)
T ss_pred             ccccceeeeEEcCCCceEEEecCCCcceEEEeCCccc---------------------------eeeeeEecccCCCcee
Confidence            22  378999999999999999999999999976332                           1122 23334445567


Q ss_pred             EEec-cCCeEEEEECCCeEEEEecccCcee-EEE-----ECCeeeEEEEECCCCC--EEEEeeCCCcEEEEcCCCCCcce
Q psy2107         281 VQWT-AVDEIITSSWDHTLKIWDAELGGMK-SEI-----VGNKSFFDVHYSPLSK--LVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       281 ~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~-~~~-----~~~~~i~~~~~~p~~~--~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      ..|+ .+..++++..||++.|||++..... .+.     .+.+.+..+.|++.|.  +|...-.-+.+++.|+++.....
T Consensus       209 ~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q  288 (344)
T KOG4532|consen  209 NSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQ  288 (344)
T ss_pred             eeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceee
Confidence            8888 4456999999999999999865432 222     1334899999998664  44444445789999999876544


Q ss_pred             EEEEe----ccccC-cEEEEEECCCCCC
Q psy2107         352 VKSTF----SSHKE-WVQSVRWSPIDPQ  374 (391)
Q Consensus       352 ~~~~~----~~h~~-~v~~~~~~~~~~~  374 (391)
                      .+...    ..|.. .|..-.|+.++..
T Consensus       289 ~I~i~~d~~~~~~tq~ifgt~f~~~n~s  316 (344)
T KOG4532|consen  289 VIVIPDDVERKHNTQHIFGTNFNNENES  316 (344)
T ss_pred             EEecCccccccccccccccccccCCCcc
Confidence            43322    22333 3777777765544

>KOG3914|consensus

Probab=99.04  E-value=5.9e-09  Score=86.80  Aligned_cols=155  Identities=20%  Similarity=0.247  Sum_probs=104.0

Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-c
Q psy2107         207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-A  285 (391)
Q Consensus       207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~  285 (391)
                      ...+..++.++++|++..+....+++++.....                         .+....... ...-+++.|. .
T Consensus        65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~-------------------------~kl~~~~~v-~~~~~ai~~~~~  118 (390)
T KOG3914|consen   65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKG-------------------------AKLLDVSCV-PKRPTAISFIRE  118 (390)
T ss_pred             ccccccCCCceEEEEEeCCCceEEEEEecCCCc-------------------------ceeeeEeec-ccCcceeeeeec
Confidence            334556788899999988888888887652210                         112222211 1222334443 2


Q ss_pred             CCeEEE---EECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc
Q psy2107         286 VDEIIT---SSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       286 ~~~l~s---~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      +.....   .+....+.+|....+.+...+-+-+-+..++++||+++|+++..|..|++-......  ..-...-||+..
T Consensus       119 ~~sv~v~dkagD~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f--~IesfclGH~eF  196 (390)
T KOG3914|consen  119 DTSVLVADKAGDVYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATF--VIESFCLGHKEF  196 (390)
T ss_pred             cceEEEEeecCCceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCccc--chhhhccccHhh
Confidence            223222   345566777776666666666555688999999999999999999999997654321  123345589999


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |..++.-+ + +.|+|+|.|++|++||++
T Consensus       197 VS~isl~~-~-~~LlS~sGD~tlr~Wd~~  223 (390)
T KOG3914|consen  197 VSTISLTD-N-YLLLSGSGDKTLRLWDIT  223 (390)
T ss_pred             eeeeeecc-C-ceeeecCCCCcEEEEecc
Confidence            99999987 4 469999999999999985

>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]

Probab=99.03  E-value=1.6e-06  Score=71.81  Aligned_cols=215  Identities=9%  Similarity=0.154  Sum_probs=137.4

Q ss_pred             CCeEEEEcCCC----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107         135 DHSVHIWTRRG----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSIECIHVCRGHERGL  207 (391)
Q Consensus       135 dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v  207 (391)
                      +.-|++|++.+    .....+..+.+..+-|+|   +++++.|.++..   +|.|..|.++...+....+-.......+-
T Consensus        15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~---~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p   91 (346)
T COG2706          15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAV---NPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPP   91 (346)
T ss_pred             CCceEEEEEeCcccccchhhhccccCCCceEEE---CCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCC
Confidence            45799998842    222234456777888999   777877777755   48888888775545555554444444555


Q ss_pred             EEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc---------
Q psy2107         208 ETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA---------  277 (391)
Q Consensus       208 ~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  277 (391)
                      +.+++++++++++++.. .|.|.++-++......                         ..+. ...|.+.         
T Consensus        92 ~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~-------------------------~~v~-~~~h~g~~p~~rQ~~~  145 (346)
T COG2706          92 CYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQ-------------------------PVVQ-VVKHTGSGPHERQESP  145 (346)
T ss_pred             eEEEECCCCCEEEEEEccCceEEEEEcccCCccc-------------------------ccee-eeecCCCCCCccccCC
Confidence            88999999999998875 5889999986532211                         0111 1112222         


Q ss_pred             -ccEEEeccCCe-EEEEE-CCCeEEEEecccCceeEE----EECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCc
Q psy2107         278 -ISAVQWTAVDE-IITSS-WDHTLKIWDAELGGMKSE----IVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEG  349 (391)
Q Consensus       278 -v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~~~~----~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~  349 (391)
                       +.+..+.|++. +++.. .-..|.+|++..|.....    ++.....+.++|+|++++..+.+ -+++|.+|......+
T Consensus       146 h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g  225 (346)
T COG2706         146 HVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVG  225 (346)
T ss_pred             ccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCc
Confidence             66778888875 44443 234799999997765432    23344778999999999776655 478999999876321


Q ss_pred             c-eEEEEe---c---cccCcEEEEEECCCCCCEEEEe
Q psy2107         350 A-IVKSTF---S---SHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       350 ~-~~~~~~---~---~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      . ..++.+   .   .-..+...|..+| ++++|.++
T Consensus       226 ~~~~lQ~i~tlP~dF~g~~~~aaIhis~-dGrFLYas  261 (346)
T COG2706         226 KFEELQTIDTLPEDFTGTNWAAAIHISP-DGRFLYAS  261 (346)
T ss_pred             eEEEeeeeccCccccCCCCceeEEEECC-CCCEEEEe
Confidence            1 111111   1   1234677888999 55555544

>KOG2114|consensus

Probab=99.03  E-value=4.6e-07  Score=83.01  Aligned_cols=218  Identities=16%  Similarity=0.144  Sum_probs=144.9

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCC-eeEEEEEecCCCCeEEEEEeCCCc-----EEEEeecCCC
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGP-VKGVAWLYNDGKDAAFISVSTDQT-----AMIWEWKVES  191 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~-v~~l~~~~~~~~~~~l~s~~~dg~-----v~iwd~~~~~  191 (391)
                      .|+|+.-++..++.|+.+|.|.+.+-.-..+..+..+... |..+..   .....+|++.+.|+.     +++|+++...
T Consensus        27 ~isc~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~---~~~~~~L~sv~Ed~~~np~llkiw~lek~~  103 (933)
T KOG2114|consen   27 AISCCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYI---LNKQNFLFSVGEDEQGNPVLLKIWDLEKVD  103 (933)
T ss_pred             ceeEEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhc---ccCceEEEEEeecCCCCceEEEEecccccC
Confidence            7888888899999999999999998766666777777766 444433   334568888877754     8999987542


Q ss_pred             -Cc-eeEE--EEEec-----CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         192 -NS-IECI--HVCRG-----HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       192 -~~-~~~~--~~~~~-----~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                       ++ ..++  +....     ...++.+++.+.+-+.+|+|-.+|.|..+.-+-.+..                       
T Consensus       104 ~n~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDr-----------------------  160 (933)
T KOG2114|consen  104 KNNSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDR-----------------------  160 (933)
T ss_pred             CCCCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhcc-----------------------
Confidence             22 3444  12222     3467899999999999999999999999875432211                       


Q ss_pred             CCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCce-eEEEECCe-eeEEEEECCCCCEEEEeeCCCcE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGM-KSEIVGNK-SFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                        ............+|+.+.+..++ .++-+..-..|.+|.+....+ ...+..++ ++.|.++++....+++++ +..+
T Consensus       161 --gsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~-~e~l  237 (933)
T KOG2114|consen  161 --GSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAG-SEFL  237 (933)
T ss_pred             --ccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEec-CceE
Confidence              11122223446889999998443 323334456788999884442 33355555 788889887655455554 5569


Q ss_pred             EEEcCCCCCcceEEEEec-cccCcEEEEE
Q psy2107         340 RLYDPKVKEGAIVKSTFS-SHKEWVQSVR  367 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~-~h~~~v~~~~  367 (391)
                      .+|+.....   +...+. +|......+.
T Consensus       238 ~fY~sd~~~---~cfaf~~g~kk~~~~~~  263 (933)
T KOG2114|consen  238 YFYDSDGRG---PCFAFEVGEKKEMLVFS  263 (933)
T ss_pred             EEEcCCCcc---eeeeecCCCeEEEEEEe
Confidence            999976433   444555 6765554443

>KOG2066|consensus

Probab=99.03  E-value=1.8e-08  Score=91.18  Aligned_cols=184  Identities=16%  Similarity=0.226  Sum_probs=129.9

Q ss_pred             CCCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         115 HDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       115 h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      ..+.++|.++++..++-|+.+|.|++++..+.. .+...|+..         +.+|.++++|+.||+|.|-.+-..  . 
T Consensus        38 ~~D~is~~av~~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~---------~~~Gey~asCS~DGkv~I~sl~~~--~-  104 (846)
T KOG2066|consen   38 QNDAISCCAVHDKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS---------ILEGEYVASCSDDGKVVIGSLFTD--D-  104 (846)
T ss_pred             hhhHHHHHHhhcceeeeccccceEEEEecCCcc-ccccccccc---------ccCCceEEEecCCCcEEEeeccCC--c-
Confidence            556888999999999999999999999987766 444445443         447899999999999999875422  2 


Q ss_pred             eEEEEEecCCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         195 ECIHVCRGHERGLETVTVSES-----RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~-----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                       ...++. ...++.+++++|+     .+.+++||.-| +.++.-+--.                           .+.-.
T Consensus       105 -~~~~~d-f~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlg---------------------------nk~~v  154 (846)
T KOG2066|consen  105 -EITQYD-FKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLG---------------------------NKDSV  154 (846)
T ss_pred             -cceeEe-cCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhc---------------------------Cccce
Confidence             222222 3568999999997     56799999988 7776532100                           11111


Q ss_pred             eecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-------eeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-------SFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                      .+....++|.++.|..  .+++-..|--|++||+.+++.+..++.+.       -...+.|.++.+ |+.| ...+|+|.
T Consensus       155 ~l~~~eG~I~~i~W~g--~lIAWand~Gv~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIG-W~d~v~i~  230 (846)
T KOG2066|consen  155 VLSEGEGPIHSIKWRG--NLIAWANDDGVKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIG-WGDSVKIC  230 (846)
T ss_pred             eeecCccceEEEEecC--cEEEEecCCCcEEEeccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEe-cCCeEEEE
Confidence            4556678999999983  45555556669999999988887776443       234577876554 4445 45578888


Q ss_pred             cCC
Q psy2107         343 DPK  345 (391)
Q Consensus       343 d~~  345 (391)
                      .++
T Consensus       231 ~I~  233 (846)
T KOG2066|consen  231 SIK  233 (846)
T ss_pred             EEe
Confidence            877

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=99.01  E-value=1.8e-07  Score=75.02  Aligned_cols=196  Identities=9%  Similarity=0.148  Sum_probs=119.0

Q ss_pred             EEEEec--CCEEEEEECCCeEEEEcCCCceEEeccC-------CCCCeeEEEEEecCCCC---eEEEEEeCCCcEEEEee
Q psy2107         120 SAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG-------HGGPVKGVAWLYNDGKD---AAFISVSTDQTAMIWEW  187 (391)
Q Consensus       120 ~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~l~~~~~~~~~---~~l~s~~~dg~v~iwd~  187 (391)
                      .-++|+  +.+||.+...|+|+++|+.+..+..+..       -..+|..+.|.+...+.   ..|+.-..+|.++-|-+
T Consensus        47 Rkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~v  126 (282)
T PF15492_consen   47 RKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLV  126 (282)
T ss_pred             eEEEECCCCcEEEEEcCCCeEEEEecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEE
Confidence            356887  5599999999999999998766665542       23567778887653222   25677788899988876


Q ss_pred             cCCC-CceeEEEEEe---cCCCCeEEEEEcCCCCEEEEEeCCC-----------cEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         188 KVES-NSIECIHVCR---GHERGLETVTVSESRQQFATGGWDC-----------LLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       188 ~~~~-~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~sg~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      ...+ ......+.+.   .+...|.++.++|..++|++||...           -+..|.+-.+..-.............
T Consensus       127 s~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~  206 (282)
T PF15492_consen  127 SVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITA  206 (282)
T ss_pred             EcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccc
Confidence            4322 2333444443   2467999999999999888876421           25567665444332221111111111


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN  315 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~  315 (391)
                      ......+....+.+...........|..|..+|++. |++...+|.|.+|++.+-.+......+
T Consensus       207 ~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~  270 (282)
T PF15492_consen  207 SSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD  270 (282)
T ss_pred             cccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence            111111111111111111122467789999997765 777899999999999887776665543

>KOG4532|consensus

Probab=99.01  E-value=4.5e-08  Score=77.34  Aligned_cols=148  Identities=14%  Similarity=0.100  Sum_probs=101.6

Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--cCCeEEEE
Q psy2107         215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVDEIITS  292 (391)
Q Consensus       215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~  292 (391)
                      ..-+|+.||..|...+|...+...                            .......|...|+-+.-.  ....+..+
T Consensus        83 kc~~la~gG~~g~fd~~~~~tn~~----------------------------h~~~cd~snn~v~~~~r~cd~~~~~~i~  134 (344)
T KOG4532|consen   83 KCVTLADGGASGQFDLFACNTNDG----------------------------HLYQCDVSNNDVTLVKRYCDLKFPLNIA  134 (344)
T ss_pred             cccEEEeccccceeeeecccCccc----------------------------ceeeecccccchhhhhhhcccccceeec
Confidence            345799999999999999875332                            222222233333222111  12347888


Q ss_pred             ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         293 SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       293 ~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      +.|.++++.++.-+......... -...+++++++++++++.+....|..|.+..................=.+..|+. 
T Consensus       135 sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~-  213 (344)
T KOG4532|consen  135 SNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSE-  213 (344)
T ss_pred             cCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeecc-
Confidence            99999999988755443333322 2478899999999999999999999999876543333223334444557888998 


Q ss_pred             CCCEEEEeeCCCcEEEEecC
Q psy2107         372 DPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ....+|++..||++.|||+|
T Consensus       214 ~~~~FAv~~Qdg~~~I~DVR  233 (344)
T KOG4532|consen  214 NDLQFAVVFQDGTCAIYDVR  233 (344)
T ss_pred             CcceEEEEecCCcEEEEEec
Confidence            55679999999999999997

>KOG4714|consensus

Probab=99.00  E-value=2.6e-09  Score=83.76  Aligned_cols=93  Identities=19%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             CeEEEEecccCcee-EEEECCeeeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCC
Q psy2107         296 HTLKIWDAELGGMK-SEIVGNKSFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDP  373 (391)
Q Consensus       296 g~i~iwd~~~~~~~-~~~~~~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~  373 (391)
                      +..+.|+++..+.+ ........+.+++-+|. ...+++|+.||.+.+||.+..  ..+...+..|+.+++.+-|+|.++
T Consensus       159 d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~--~~p~S~l~ahk~~i~eV~FHpk~p  236 (319)
T KOG4714|consen  159 DNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNV--AMPVSLLKAHKAEIWEVHFHPKNP  236 (319)
T ss_pred             cceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccc--cchHHHHHHhhhhhhheeccCCCc
Confidence            34556665533221 11222335888888886 457788999999999999875  335567889999999999999999


Q ss_pred             CEEEEeeCCCcEEEEec
Q psy2107         374 QLFVSASFDNSVKLWDL  390 (391)
Q Consensus       374 ~~l~s~~~dg~v~iwdl  390 (391)
                      ..|++++.||.+.-||-
T Consensus       237 ~~Lft~sedGslw~wda  253 (319)
T KOG4714|consen  237 EHLFTCSEDGSLWHWDA  253 (319)
T ss_pred             hheeEecCCCcEEEEcC
Confidence            99999999999999984

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.97  E-value=2.4e-06  Score=76.37  Aligned_cols=207  Identities=13%  Similarity=0.072  Sum_probs=118.0

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeE-EEEEeCC---CcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA-FISVSTD---QTAMIWEWKVESNSIECIHVCRGHERGLETVT  211 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-l~s~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~  211 (391)
                      ..|.+=|.++.....+.... ....-.|   +|+++. ++..+.+   ..|.++|+  .++..+.+..   ..+......
T Consensus       169 ~~l~~~d~dg~~~~~~~~~~-~~~~p~w---SpDG~~~i~y~s~~~~~~~Iyv~dl--~tg~~~~lt~---~~g~~~~~~  239 (419)
T PRK04043        169 SNIVLADYTLTYQKVIVKGG-LNIFPKW---ANKEQTAFYYTSYGERKPTLYKYNL--YTGKKEKIAS---SQGMLVVSD  239 (419)
T ss_pred             ceEEEECCCCCceeEEccCC-CeEeEEE---CCCCCcEEEEEEccCCCCEEEEEEC--CCCcEEEEec---CCCcEEeeE
Confidence            35666677666555444443 7788999   667763 5544443   34666664  3444444432   345566788


Q ss_pred             EcCCCCEEEEE-eCC--CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe
Q psy2107         212 VSESRQQFATG-GWD--CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE  288 (391)
Q Consensus       212 ~~~~~~~l~sg-~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  288 (391)
                      |+|+|+.++.. +.+  ..|.++|+.++.                              ...+..+........|+|++.
T Consensus       240 ~SPDG~~la~~~~~~g~~~Iy~~dl~~g~------------------------------~~~LT~~~~~d~~p~~SPDG~  289 (419)
T PRK04043        240 VSKDGSKLLLTMAPKGQPDIYLYDTNTKT------------------------------LTQITNYPGIDVNGNFVEDDK  289 (419)
T ss_pred             ECCCCCEEEEEEccCCCcEEEEEECCCCc------------------------------EEEcccCCCccCccEECCCCC
Confidence            99999877643 333  457777775532                              122222222234457997764


Q ss_pred             -EEEEE-CCC--eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---------CcEEEEcCCCCCcceEEEE
Q psy2107         289 -IITSS-WDH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---------KQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       289 -l~s~~-~dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~  355 (391)
                       ++..+ ..+  .|.+.|+.+++..+.......  ...|+|+|++|+..+..         ..|.+.|+..+..    ..
T Consensus       290 ~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~~g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~----~~  363 (419)
T PRK04043        290 RIVFVSDRLGYPNIFMKKLNSGSVEQVVFHGKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI----RR  363 (419)
T ss_pred             EEEEEECCCCCceEEEEECCCCCeEeCccCCCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe----EE
Confidence             44444 333  677888887766433322211  34899999988766543         3688888876652    22


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      +... .......|+|++..++++....+.-.+|
T Consensus       364 LT~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~  395 (419)
T PRK04043        364 LTAN-GVNQFPRFSSDGGSIMFIKYLGNQSALG  395 (419)
T ss_pred             CCCC-CCcCCeEECCCCCEEEEEEccCCcEEEE
Confidence            3222 2233578999665555554444443333

>KOG4714|consensus

Probab=98.96  E-value=1.1e-08  Score=80.32  Aligned_cols=204  Identities=17%  Similarity=0.188  Sum_probs=116.9

Q ss_pred             cCCEEEEEECCCeEEEEcCCCc--eEEeccC-CCCCeeEEEEEecCCCCeEEEEEe-----CCCcEEEEeecCCCCceeE
Q psy2107         125 HNDWILTGCYDHSVHIWTRRGE--HKLNIPG-HGGPVKGVAWLYNDGKDAAFISVS-----TDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       125 ~~~~l~t~~~dg~i~iwd~~~~--~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~  196 (391)
                      -+..++++..||.+.+.+.+..  ...++.. |.+ -.+.+++   ..++.+.++.     .-+..++|+++....-.. 
T Consensus       100 ~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~-~as~~~~---~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~-  174 (319)
T KOG4714|consen  100 TDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSG-SASRKIC---RHGNSILSGGCGNWNAQDNFYANTLDPIKTLIP-  174 (319)
T ss_pred             cCCceEecCCCceEEEEechHHHhhhhhccccccc-cccccee---ecccEEecCCcceEeeccceeeecccccccccc-
Confidence            3778999999999999987431  1111111 111 1111111   1233333322     223445565442211111 


Q ss_pred             EEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         197 IHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                       ..  .-...|++++-+|.. ..+++|+.||.+.+||.++..                            .+...++.|+
T Consensus       175 -~~--~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~----------------------------~p~S~l~ahk  223 (319)
T KOG4714|consen  175 -SK--KALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVA----------------------------MPVSLLKAHK  223 (319)
T ss_pred             -cc--cccccchhhhCCcccccEEEEecCCCeEEEEEccccc----------------------------chHHHHHHhh
Confidence             11  112349999999954 566788899999999998743                            2666788999


Q ss_pred             CcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-c-ce
Q psy2107         276 EAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE-G-AI  351 (391)
Q Consensus       276 ~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-~-~~  351 (391)
                      .++..+.|+|.  ..|++++.||.+..||..+ +.            ++.+++.         ..+..|=-...- . ..
T Consensus       224 ~~i~eV~FHpk~p~~Lft~sedGslw~wdas~-~~------------l~i~~~~---------s~~s~WLsgD~v~s~i~  281 (319)
T KOG4714|consen  224 AEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST-TF------------LSISNQA---------SVISSWLSGDPVKSRIE  281 (319)
T ss_pred             hhhhheeccCCCchheeEecCCCcEEEEcCCC-ce------------EEecCcc---------ccccccccCCcccceEe
Confidence            99999999954  4599999999999999765 11            1122221         223333110000 0 00


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +...+......|+++...   +..|++|+.-+.|++.+
T Consensus       282 i~~ll~~~~~SinsfDV~---g~~lVcgtd~eaIyl~~  316 (319)
T KOG4714|consen  282 ITSLLPSRSLSINSFDVL---GPCLVCGTDAEAIYLTR  316 (319)
T ss_pred             eeccccccceeeeeeecc---CceEEeccccceEEEec
Confidence            111223334457777664   34689999888898875

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.93  E-value=7.7e-09  Score=58.55  Aligned_cols=38  Identities=24%  Similarity=0.643  Sum_probs=36.3

Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                      +++..+.+|.+.|.+|+|+|++++|++|+.|+.|++||
T Consensus         2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred             eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence            57889999999999999999999999999999999997

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.93  E-value=3.6e-07  Score=78.73  Aligned_cols=294  Identities=18%  Similarity=0.250  Sum_probs=163.6

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCC---------
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDH---------  136 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg---------  136 (391)
                      ..|++.|.++...-...+..++...-..+              ..+.|. .|.-+.|+  +++|.+=+..+         
T Consensus        38 ~~~SP~G~~l~~~~~~~V~~~~g~~~~~l--------------~~~~~~-~V~~~~fSP~~kYL~tw~~~pi~~pe~e~s  102 (561)
T COG5354          38 VSESPLGTYLFSEHAAGVECWGGPSKAKL--------------VRFRHP-DVKYLDFSPNEKYLVTWSREPIIEPEIEIS  102 (561)
T ss_pred             eeecCcchheehhhccceEEccccchhhe--------------eeeecC-CceecccCcccceeeeeccCCccChhhccC
Confidence            37788888877544333333333222211              111122 46666776  66777755543         


Q ss_pred             ------eEEEEcCC-CceEEeccCCCCC--ee-EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         137 ------SVHIWTRR-GEHKLNIPGHGGP--VK-GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       137 ------~i~iwd~~-~~~~~~~~~~~~~--v~-~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                            .+.+||.. +..+..+.....+  .+ -+.|+   -+..++|-- ....+.|+++ ...-...+...++  ...
T Consensus       103 p~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s---~~D~y~ARv-v~~sl~i~e~-t~n~~~~p~~~lr--~~g  175 (561)
T COG5354         103 PFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFS---IDDKYVARV-VGSSLYIHEI-TDNIEEHPFKNLR--PVG  175 (561)
T ss_pred             CccccCceeEEeccCceeEeeccccCCcccccceeeee---ecchhhhhh-ccCeEEEEec-CCccccCchhhcc--ccc
Confidence                  49999994 5555566655554  55 57773   344444433 3456888885 2222222222222  356


Q ss_pred             eEEEEEcCCCC--EEEE-----EeCCCcEEEEECCCCCCCCCC------------CCCCCCCcc----ccccccccc---
Q psy2107         207 LETVTVSESRQ--QFAT-----GGWDCLLKIWSADISKERGDP------------SENGDEGTT----SKKRKKEYS---  260 (391)
Q Consensus       207 v~~l~~~~~~~--~l~s-----g~~dg~i~iwd~~~~~~~~~~------------~~~~~~~~~----~~~~~~~~~---  260 (391)
                      |....|+|.++  .|+.     ++.++.+++|.+..++.+..-            ...+.....    ..+....+.   
T Consensus       176 i~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfges  255 (561)
T COG5354         176 ILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGES  255 (561)
T ss_pred             eeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccc
Confidence            88888888643  3432     456788888888644432211            000100000    000000010   


Q ss_pred             ----cCCCCCceeeecCccCcccEEEeccCCe---EEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         261 ----SASSRTPLITLKGHKEAISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       261 ----~~~~~~~~~~~~~~~~~v~~~~~~~~~~---l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                          ...+...+.....-.++|...+|.|.+.   +++|-.+..+.++|++..  +...-....-..+.|+|.+++++.+
T Consensus       256 nLyl~~~~e~~i~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N--l~~~~Pe~~rNT~~fsp~~r~il~a  333 (561)
T COG5354         256 NLYLLRITERSIPVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN--LRFYFPEQKRNTIFFSPHERYILFA  333 (561)
T ss_pred             eEEEEeecccccceeccccccceeeeecccCCceeEEecccccceeecccccc--eEEecCCcccccccccCcccEEEEe
Confidence                0011111222224578899999985443   555668899999999865  3333334455678899999999987


Q ss_pred             eCC---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee------CCCcEEEEec
Q psy2107         334 SAD---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS------FDNSVKLWDL  390 (391)
Q Consensus       334 ~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------~dg~v~iwdl  390 (391)
                      +-|   |.|-+||....  ..+...+.+-.  .+-+.|+|++ .++.+..      .|..++|||+
T Consensus       334 gF~nl~gni~i~~~~~r--f~~~~~~~~~n--~s~~~wspd~-qF~~~~~ts~k~~~Dn~i~l~~v  394 (561)
T COG5354         334 GFDNLQGNIEIFDPAGR--FKVAGAFNGLN--TSYCDWSPDG-QFYDTDTTSEKLRVDNSIKLWDV  394 (561)
T ss_pred             cCCccccceEEeccCCc--eEEEEEeecCC--ceEeeccCCc-eEEEecCCCcccccCcceEEEEe
Confidence            655   78999997643  23333554433  4567899944 4554442      3788999996

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.92  E-value=1.9e-06  Score=76.89  Aligned_cols=246  Identities=8%  Similarity=-0.017  Sum_probs=135.8

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      ...++.+++++.+|.+.-+|. +++.+....-..........     ++..++.++.+|.+..+|..    +.+.+....
T Consensus        62 ~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v-----~~~~v~v~~~~g~l~ald~~----tG~~~W~~~  132 (377)
T TIGR03300        62 AVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA-----DGGLVFVGTEKGEVIALDAE----DGKELWRAK  132 (377)
T ss_pred             EEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE-----cCCEEEEEcCCCEEEEEECC----CCcEeeeec
Confidence            445889999999999999997 67766655433322222332     35567788889999999854    223333332


Q ss_pred             cCCCCeEE-EEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC------Cccccccccccc----------cCCC
Q psy2107         202 GHERGLET-VTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE------GTTSKKRKKEYS----------SASS  264 (391)
Q Consensus       202 ~~~~~v~~-l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----------~~~~  264 (391)
                      .. ..+.+ ...  .+..++.++.+|.|..||.++++..-........      ..........+.          +..+
T Consensus       133 ~~-~~~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~t  209 (377)
T TIGR03300       133 LS-SEVLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQT  209 (377)
T ss_pred             cC-ceeecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccC
Confidence            21 22221 111  2446777888999999999887754322111100      000000000010          1111


Q ss_pred             CCceeeecCc-c---Cc------c-cEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         265 RTPLITLKGH-K---EA------I-SAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       265 ~~~~~~~~~~-~---~~------v-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                      .+.+...... .   ..      + ....+ .++.++.++.+|.+..||..+++.+....... .....  ..+..++++
T Consensus       210 G~~~W~~~~~~~~g~~~~~~~~~~~~~p~~-~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~-~~~p~--~~~~~vyv~  285 (377)
T TIGR03300       210 GQPLWEQRVALPKGRTELERLVDVDGDPVV-DGGQVYAVSYQGRVAALDLRSGRVLWKRDASS-YQGPA--VDDNRLYVT  285 (377)
T ss_pred             CCEeeeeccccCCCCCchhhhhccCCccEE-ECCEEEEEEcCCEEEEEECCCCcEEEeeccCC-ccCce--EeCCEEEEE
Confidence            1111111000 0   00      0 00111 24678888999999999999998876665322 11122  246778888


Q ss_pred             eCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         334 SADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       334 ~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.+|.++.+|..+++   .+...... .....+....  + ..++.++.+|.|+++|.
T Consensus       286 ~~~G~l~~~d~~tG~---~~W~~~~~~~~~~ssp~i~--g-~~l~~~~~~G~l~~~d~  337 (377)
T TIGR03300       286 DADGVVVALDRRSGS---ELWKNDELKYRQLTAPAVV--G-GYLVVGDFEGYLHWLSR  337 (377)
T ss_pred             CCCCeEEEEECCCCc---EEEccccccCCccccCEEE--C-CEEEEEeCCCEEEEEEC
Confidence            889999999987765   33332111 1112222221  3 36788899999999986

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG0309|consensus

Probab=98.92  E-value=5.5e-09  Score=93.52  Aligned_cols=202  Identities=18%  Similarity=0.219  Sum_probs=140.4

Q ss_pred             CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEE
Q psy2107         155 GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR--QQFATGGWDCLLKIWS  232 (391)
Q Consensus       155 ~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~sg~~dg~i~iwd  232 (391)
                      .+++.++..   +|.++-++.++.-| +.+.|+...-.....++.+.  .-.|-.+.|+|..  .+-++......-.+|+
T Consensus        24 ~~~~~a~si---~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~t--pw~vad~qws~h~a~~~wiVsts~qkaiiwn   97 (1081)
T KOG0309|consen   24 DGGFNAVSI---NPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHIT--PWQVADVQWSPHPAKPYWIVSTSNQKAIIWN   97 (1081)
T ss_pred             cCcccceee---ccccchhhhhhhcC-eEEEeccCCCCCceeeeccC--cchhcceecccCCCCceeEEecCcchhhhhh
Confidence            456777787   55666688877766 45667654443333333332  2245666777643  3444444444556788


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCce-e
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGM-K  309 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~-~  309 (391)
                      +....                          .......+.+|...|+.+.|++.  ..+++++.|-.+..||+++... +
T Consensus        98 lA~ss--------------------------~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~  151 (1081)
T KOG0309|consen   98 LAKSS--------------------------SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPF  151 (1081)
T ss_pred             hhcCC--------------------------ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcce
Confidence            85422                          24456677899999999999954  4589999999999999987543 3


Q ss_pred             EEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         310 SEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       310 ~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ..+. -+.....++|+-....+.+.+..+.|++||.+.+..  ++..+++|...|+.++|.......+.+++.||+|+.|
T Consensus       152 ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs~--pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw  229 (1081)
T KOG0309|consen  152 YSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGST--PLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFW  229 (1081)
T ss_pred             eeeecccccCceeeecccCcchhhhccCCceEEEeccCCCc--ceEEecccceeeehHHHhhhhhhhhcccCCCCceeee
Confidence            3332 344667788987666666667788899999987543  4557788999999999986555578999999999999


Q ss_pred             ec
Q psy2107         389 DL  390 (391)
Q Consensus       389 dl  390 (391)
                      |.
T Consensus       230 ~y  231 (1081)
T KOG0309|consen  230 DY  231 (1081)
T ss_pred             cc
Confidence            84

>KOG2695|consensus

Probab=98.90  E-value=7.3e-09  Score=84.57  Aligned_cols=117  Identities=12%  Similarity=0.188  Sum_probs=93.0

Q ss_pred             ccCcccEEEec-cCCeEEEEECCCeEEEEecccC-----ceeEEEECCeeeEEEEECC-CCCEEEEeeCCCcEEEEcCCC
Q psy2107         274 HKEAISAVQWT-AVDEIITSSWDHTLKIWDAELG-----GMKSEIVGNKSFFDVHYSP-LSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       274 ~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ..+.|.++.|. .++.++.|+..|.|..+|++.+     .+...+.+++.++++..-. ++++|++.+.+|.|.+||++.
T Consensus       251 sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~  330 (425)
T KOG2695|consen  251 SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRA  330 (425)
T ss_pred             cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhccccceEeeccCcCceeEeeehh
Confidence            46678888998 4778999999999999999864     5677788888899888766 688999999999999999998


Q ss_pred             CCcceEEEEeccccCcEEEEE--ECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVR--WSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+...-+..+.+|...-.-+-  ..+ .+..++++|+|...|||.++
T Consensus       331 ~K~~~~V~qYeGHvN~~a~l~~~v~~-eeg~I~s~GdDcytRiWsl~  376 (425)
T KOG2695|consen  331 TKCKKSVMQYEGHVNLSAYLPAHVKE-EEGSIFSVGDDCYTRIWSLD  376 (425)
T ss_pred             hhcccceeeeeccccccccccccccc-ccceEEEccCeeEEEEEecc
Confidence            764445788889855333332  334 45578899999999999875

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.90  E-value=1.5e-06  Score=74.49  Aligned_cols=120  Identities=11%  Similarity=0.068  Sum_probs=96.3

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCC-eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDH-SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg-~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      .+|...|.-..+.  ++-++.|..|| .+-|+|..+.....+...-+.|.++..   +++|++++.+.....+.+.|++ 
T Consensus       356 v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e~~lg~I~av~v---s~dGK~~vvaNdr~el~vidid-  431 (668)
T COG4946         356 VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIEKDLGNIEAVKV---SPDGKKVVVANDRFELWVIDID-  431 (668)
T ss_pred             cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEeeCCccceEEEEE---cCCCcEEEEEcCceEEEEEEec-
Confidence            4577778777775  66899999999 999999998888888888899999999   8889999998888888777755 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCCCC
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----LLKIWSADISKER  239 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~  239 (391)
                       +++.+.+  -+...+-|+.+.|+|+++++|-+--+|    .|+++|+.+++..
T Consensus       432 -ngnv~~i--dkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy  482 (668)
T COG4946         432 -NGNVRLI--DKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIY  482 (668)
T ss_pred             -CCCeeEe--cccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEE
Confidence             4443333  234577899999999999999876654    6899999886643

>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL

Probab=98.89  E-value=8.7e-07  Score=79.00  Aligned_cols=245  Identities=7%  Similarity=-0.013  Sum_probs=135.7

Q ss_pred             EEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE
Q psy2107         122 IDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC  200 (391)
Q Consensus       122 ~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  200 (391)
                      ....++.++.++.+|.+..+|. +++.+.+.... +.+.+.-.   - .+..++.++.+|.+..||...    .+.+...
T Consensus       101 p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~-~~~~~~p~---v-~~~~v~v~~~~g~l~a~d~~t----G~~~W~~  171 (377)
T TIGR03300       101 VGADGGLVFVGTEKGEVIALDAEDGKELWRAKLS-SEVLSPPL---V-ANGLVVVRTNDGRLTALDAAT----GERLWTY  171 (377)
T ss_pred             eEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccC-ceeecCCE---E-ECCEEEEECCCCeEEEEEcCC----CceeeEE
Confidence            3456788889999999999998 66666654422 22221111   1 234577778899999999542    2333333


Q ss_pred             ecCCCCe-----EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC------------Ccccccccccc----
Q psy2107         201 RGHERGL-----ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE------------GTTSKKRKKEY----  259 (391)
Q Consensus       201 ~~~~~~v-----~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~~~~~~----  259 (391)
                      ......+     .+....  +..++.+..+|.+..+|.++++...........            ..........+    
T Consensus       172 ~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~  249 (377)
T TIGR03300       172 SRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSY  249 (377)
T ss_pred             ccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEc
Confidence            2211111     111121  236778888899999999887654321110000            00000000000    


Q ss_pred             ------ccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-Ce-eeEEEEECCCCCEEE
Q psy2107         260 ------SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-NK-SFFDVHYSPLSKLVI  331 (391)
Q Consensus       260 ------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~-~i~~~~~~p~~~~l~  331 (391)
                            .+..+.+.+.... . ........ .++.++.++.+|.+..+|..+++.+..... .. .......  .+..++
T Consensus       250 ~g~l~a~d~~tG~~~W~~~-~-~~~~~p~~-~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~  324 (377)
T TIGR03300       250 QGRVAALDLRSGRVLWKRD-A-SSYQGPAV-DDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLV  324 (377)
T ss_pred             CCEEEEEECCCCcEEEeec-c-CCccCceE-eCCEEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEE
Confidence                  0111111111111 0 01111111 356788889999999999999988765522 11 1122222  367888


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEE-EEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ-SVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      +++.+|.|+++|..+++   .+..+..+...+. +..+.  ++ .|+.++.||.|..|
T Consensus       325 ~~~~~G~l~~~d~~tG~---~~~~~~~~~~~~~~sp~~~--~~-~l~v~~~dG~l~~~  376 (377)
T TIGR03300       325 VGDFEGYLHWLSREDGS---FVARLKTDGSGIASPPVVV--GD-GLLVQTRDGDLYAF  376 (377)
T ss_pred             EEeCCCEEEEEECCCCC---EEEEEEcCCCccccCCEEE--CC-EEEEEeCCceEEEe
Confidence            99999999999988776   6666665554332 22333  33 37788889998875

Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.

>KOG4190|consensus

Probab=98.89  E-value=6.6e-09  Score=90.11  Aligned_cols=173  Identities=15%  Similarity=0.262  Sum_probs=121.9

Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      -.+..+.+|...|..++--.+.+-+++++.|+++++|.++.....                      ..+..+..++..|
T Consensus       726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~----------------------~~tsaCQfTY~aH  783 (1034)
T KOG4190|consen  726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDE----------------------IGTSACQFTYQAH  783 (1034)
T ss_pred             eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCc----------------------cccceeeeEhhhc
Confidence            345678899999999988778888999999999999999753211                      1223467788899


Q ss_pred             cCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---CCeeeEEEEECC--CCCEEEEe-eCCCcEEEEcCCCCC
Q psy2107         275 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYSP--LSKLVITA-SADKQIRLYDPKVKE  348 (391)
Q Consensus       275 ~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~p--~~~~l~~g-~~dg~i~iwd~~~~~  348 (391)
                      +.+|..+.|..+.+ ..++.||.|.+||.--++++....   .++.+..+..-|  +...+++| +...+|+++|.+..+
T Consensus       784 kk~i~~igfL~~lr-~i~ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce  862 (1034)
T KOG4190|consen  784 KKPIHDIGFLADLR-SIASCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE  862 (1034)
T ss_pred             cCcccceeeeeccc-eeeeccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccccc
Confidence            99999999985443 233558999999987777665332   222333333333  34455554 788999999998876


Q ss_pred             cceEEEEe--ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         349 GAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       349 ~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ........  .+....+.+++..+ .++.++.+-..|+|.+-|.|
T Consensus       863 ~~~E~kVcna~~Pna~~R~iaVa~-~GN~lAa~LSnGci~~LDaR  906 (1034)
T KOG4190|consen  863 WTCELKVCNAPGPNALTRAIAVAD-KGNKLAAALSNGCIAILDAR  906 (1034)
T ss_pred             ceeeEEeccCCCCchheeEEEecc-CcchhhHHhcCCcEEEEecC
Confidence            33222222  34456789999998 66778888889999888865

>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal

Probab=98.89  E-value=4.8e-06  Score=67.06  Aligned_cols=197  Identities=13%  Similarity=0.152  Sum_probs=118.2

Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC---CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH---ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS  243 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~  243 (391)
                      +.+|++||. -.|..|.|-..+  ..-...+....-+   ...-..++|+||+.+||.+...|+|+++|+........+ 
T Consensus         6 ~~~Gk~lAi-~qd~~iEiRsa~--Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf~I~-   81 (282)
T PF15492_consen    6 SSDGKLLAI-LQDQCIEIRSAK--DDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELFVIP-   81 (282)
T ss_pred             cCCCcEEEE-EeccEEEEEecc--CCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeEEcC-
Confidence            445665554 456777766532  1111222333222   234578999999999999999999999999753322111 


Q ss_pred             CCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-------CeEEEEECCCeEEEEecccC-----ceeEE
Q psy2107         244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-------DEIITSSWDHTLKIWDAELG-----GMKSE  311 (391)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~l~s~~~dg~i~iwd~~~~-----~~~~~  311 (391)
                      +...                      ....-...|..+.|.+.       ..|++-..+|.++-|-+..+     +...+
T Consensus        82 p~~~----------------------~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hs  139 (282)
T PF15492_consen   82 PAMS----------------------FPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHS  139 (282)
T ss_pred             cccc----------------------cCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEE
Confidence            0000                      00012345555656522       24788888888888776432     23333


Q ss_pred             EE----CCeeeEEEEECCCCCEEEEeeCC-----------CcEEEEcCCCCCc------------------ceEEE----
Q psy2107         312 IV----GNKSFFDVHYSPLSKLVITASAD-----------KQIRLYDPKVKEG------------------AIVKS----  354 (391)
Q Consensus       312 ~~----~~~~i~~~~~~p~~~~l~~g~~d-----------g~i~iwd~~~~~~------------------~~~~~----  354 (391)
                      +.    ....|.++.++|..++|++|+..           .-+..|.+-....                  .....    
T Consensus       140 fsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~  219 (282)
T PF15492_consen  140 FSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSF  219 (282)
T ss_pred             EEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccce
Confidence            33    23489999999998888777532           1355665432110                  00000    


Q ss_pred             ----EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         355 ----TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       355 ----~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                          ........|..|..|| ++.+||+...+|.|.+|++
T Consensus       220 ~~fs~~~~~~d~i~kmSlSP-dg~~La~ih~sG~lsLW~i  258 (282)
T PF15492_consen  220 KFFSRQGQEQDGIFKMSLSP-DGSLLACIHFSGSLSLWEI  258 (282)
T ss_pred             eeeeccccCCCceEEEEECC-CCCEEEEEEcCCeEEEEec
Confidence                0112356799999999 6779999999999999987

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.88  E-value=1.5e-05  Score=66.44  Aligned_cols=217  Identities=9%  Similarity=0.065  Sum_probs=132.1

Q ss_pred             EEEec---CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEE
Q psy2107         121 AIDFH---NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECI  197 (391)
Q Consensus       121 ~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~  197 (391)
                      +..|.   +.++++-...+.|..|+..+.....+....  ...+++..  +++. ++.+...+ +.++|+  .+...+.+
T Consensus         4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~--~~g~-l~v~~~~~-~~~~d~--~~g~~~~~   75 (246)
T PF08450_consen    4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDR--PDGR-LYVADSGG-IAVVDP--DTGKVTVL   75 (246)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEEC--TTSE-EEEEETTC-EEEEET--TTTEEEEE
T ss_pred             ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEc--cCCE-EEEEEcCc-eEEEec--CCCcEEEE
Confidence            34555   446666667899999999776665443322  66667632  3554 44445444 455574  34455555


Q ss_pred             EEEe--c-CCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         198 HVCR--G-HERGLETVTVSESRQQFATGGWD--------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       198 ~~~~--~-~~~~v~~l~~~~~~~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      ....  . .....+.+++.|+|++.++....        |.|..++...                               
T Consensus        76 ~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~~-------------------------------  124 (246)
T PF08450_consen   76 ADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPDG-------------------------------  124 (246)
T ss_dssp             EEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETTS-------------------------------
T ss_pred             eeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCCC-------------------------------
Confidence            5553  1 34567899999999977765543        4466666541                               


Q ss_pred             ceeeecCccCcccEEEeccCCe-EE-EEECCCeEEEEecccCce-e---EEE---ECCe-eeEEEEECCCCCEEEEeeCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDE-II-TSSWDHTLKIWDAELGGM-K---SEI---VGNK-SFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~dg~i~iwd~~~~~~-~---~~~---~~~~-~i~~~~~~p~~~~l~~g~~d  336 (391)
                      ....+...-.....++|++++. |+ +-+..+.|..+++..... +   ..+   .... ..-.+++..+|++.++....
T Consensus       125 ~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~  204 (246)
T PF08450_consen  125 KVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGG  204 (246)
T ss_dssp             EEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETT
T ss_pred             eEEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCC
Confidence            1222222334457899997664 54 556788899999864322 1   112   2222 46789999999988888889


Q ss_pred             CcEEEEcCCCCCcceEEEEeccccCcEEEEEEC-CCCCCEEEEee
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS-PIDPQLFVSAS  380 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~  380 (391)
                      +.|.+++.. ++   ++..+.--...+++++|. ++...+++|.+
T Consensus       205 ~~I~~~~p~-G~---~~~~i~~p~~~~t~~~fgg~~~~~L~vTta  245 (246)
T PF08450_consen  205 GRIVVFDPD-GK---LLREIELPVPRPTNCAFGGPDGKTLYVTTA  245 (246)
T ss_dssp             TEEEEEETT-SC---EEEEEE-SSSSEEEEEEESTTSSEEEEEEB
T ss_pred             CEEEEECCC-cc---EEEEEcCCCCCEEEEEEECCCCCEEEEEeC
Confidence            999999986 44   444444334579999994 54556666654

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=98.86  E-value=1.2e-08  Score=57.70  Aligned_cols=37  Identities=35%  Similarity=0.778  Sum_probs=34.5

Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++..+.+|.+.|++|+|+| ++.+|+|++.|+.|++||
T Consensus         3 ~~~~~~~h~~~i~~i~~~~-~~~~~~s~~~D~~i~vwd   39 (39)
T PF00400_consen    3 CVRTFRGHSSSINSIAWSP-DGNFLASGSSDGTIRVWD   39 (39)
T ss_dssp             EEEEEESSSSSEEEEEEET-TSSEEEEEETTSEEEEEE
T ss_pred             EEEEEcCCCCcEEEEEEec-ccccceeeCCCCEEEEEC
Confidence            6778999999999999999 678999999999999998

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....

>KOG1275|consensus

Probab=98.84  E-value=1.5e-07  Score=86.67  Aligned_cols=178  Identities=11%  Similarity=0.158  Sum_probs=128.7

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      ++.++.|+....+..+|+.+.+..+... ..+.|.-+..     +++++.+|...|+|.+-|.+    ..+.++++..|+
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~-----Nnr~lf~G~t~G~V~LrD~~----s~~~iht~~aHs  217 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY-----NNRNLFCGDTRGTVFLRDPN----SFETIHTFDAHS  217 (1118)
T ss_pred             CcceeecchhhheeeeecccceeeeeeeccCCceEEEEe-----cCcEEEeecccceEEeecCC----cCceeeeeeccc
Confidence            6678888888888888986665554432 2334766665     67899999999999999854    678899999999


Q ss_pred             CCeEEEEEcCCCCEEEEEeC---------CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         205 RGLETVTVSESRQQFATGGW---------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                      +.|..+..  .|+.|+++|.         |..|++||++.-+...                          |+.   -+.
T Consensus       218 ~siSDfDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~--------------------------PI~---~~~  266 (1118)
T KOG1275|consen  218 GSISDFDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALS--------------------------PIQ---FPY  266 (1118)
T ss_pred             cceeeeec--cCCeEEEeecccccccccccchhhhhhhhhhhccC--------------------------Ccc---ccc
Confidence            99987665  5778888875         4568899998744322                          222   122


Q ss_pred             CcccEEEecc--CCeEEEEECCCeEEEEe---cccCce-eEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         276 EAISAVQWTA--VDEIITSSWDHTLKIWD---AELGGM-KSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       276 ~~v~~~~~~~--~~~l~s~~~dg~i~iwd---~~~~~~-~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      ++ .-+.|+|  ...+++++..|...+-|   +.+... +..+. ....+..++++++++.++.|..+|.|.+|.-
T Consensus       267 ~P-~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~  341 (1118)
T KOG1275|consen  267 GP-QFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD  341 (1118)
T ss_pred             Cc-hhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence            22 4455664  35688899999999998   433321 22222 2335899999999999999999999999974

>KOG2315|consensus

Probab=98.82  E-value=2.3e-06  Score=74.78  Aligned_cols=190  Identities=14%  Similarity=0.202  Sum_probs=120.8

Q ss_pred             CCCcEEEEEec-C-C--EEEE-----EECCCeEEEEcCCCceEEecc----CCCCCeeEEEEEecCCCCe-EEEEE--eC
Q psy2107         115 HDDWVSAIDFH-N-D--WILT-----GCYDHSVHIWTRRGEHKLNIP----GHGGPVKGVAWLYNDGKDA-AFISV--ST  178 (391)
Q Consensus       115 h~~~V~~~~~~-~-~--~l~t-----~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~l~~~~~~~~~~-~l~s~--~~  178 (391)
                      |...|+.+.++ + .  .+|+     .+.-+.|+||...-.......    -....=-.+.|.+   .+. +|+.+  .-
T Consensus       164 ~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~---~gt~LLvLastdV  240 (566)
T KOG2315|consen  164 SVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNK---LGTALLVLASTDV  240 (566)
T ss_pred             eccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEecc---CCceEEEEEEEee
Confidence            67788888888 2 2  4443     344568999987421111110    1112222466633   222 22222  22


Q ss_pred             C---------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE--EeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         179 D---------QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT--GGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       179 d---------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s--g~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      |         .++.+.++.    ...+...+. ..++|.++.|+|+++.+++  |-+-..+.++|++.            
T Consensus       241 Dktn~SYYGEq~Lyll~t~----g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr~------------  303 (566)
T KOG2315|consen  241 DKTNASYYGEQTLYLLATQ----GESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLRG------------  303 (566)
T ss_pred             cCCCccccccceEEEEEec----CceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCCC------------
Confidence            3         245555532    112233332 3789999999999987765  45667899999863            


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC---CCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW---DHTLKIWDAELGGMKSEIVGNKSFFDVHY  323 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~~~~~~~i~~~~~  323 (391)
                                        .++..+  ..++-.++-|+|.+. ++.++.   -|.|-+||+.+.+++..+..... +-+.|
T Consensus       304 ------------------~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~t-t~~eW  362 (566)
T KOG2315|consen  304 ------------------KPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAANT-TVFEW  362 (566)
T ss_pred             ------------------CEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccCCc-eEEEE
Confidence                              344443  467778999997765 555544   58999999999888877766543 45799


Q ss_pred             CCCCCEEEEeeC------CCcEEEEcCC
Q psy2107         324 SPLSKLVITASA------DKQIRLYDPK  345 (391)
Q Consensus       324 ~p~~~~l~~g~~------dg~i~iwd~~  345 (391)
                      +|||++++|++.      |+.++||+..
T Consensus       363 ~PdGe~flTATTaPRlrvdNg~Kiwhyt  390 (566)
T KOG2315|consen  363 SPDGEYFLTATTAPRLRVDNGIKIWHYT  390 (566)
T ss_pred             cCCCcEEEEEeccccEEecCCeEEEEec
Confidence            999999999864      6889999974

>KOG0882|consensus

Probab=98.81  E-value=3.7e-08  Score=83.34  Aligned_cols=203  Identities=14%  Similarity=0.117  Sum_probs=139.0

Q ss_pred             cCCCCcEEEEEec-CCEEEEEECCCeEEEEcCCC----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEe
Q psy2107         113 ILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRRG----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWE  186 (391)
Q Consensus       113 ~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd  186 (391)
                      .-|++.|+.+... .+++.+++.||.++.|....    +-+..+..|-+.|.+++.   +-++.++.+++. |..++++|
T Consensus         6 ymhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~---S~dg~L~~Sv~d~Dhs~KvfD   82 (558)
T KOG0882|consen    6 YMHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAV---SYDGWLFRSVEDPDHSVKVFD   82 (558)
T ss_pred             hcccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhc---cccceeEeeccCcccceeEEE
Confidence            3489999988887 88999999999999998754    223345578888888887   668889999887 99999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCC--CEEEE-EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESR--QQFAT-GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~--~~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +..-  .......+.--.+.+.+ ..++..  ..++. .-.+|.+.++|-....                          
T Consensus        83 vEn~--DminmiKL~~lPg~a~w-v~skGd~~s~IAVs~~~sg~i~VvD~~~d~--------------------------  133 (558)
T KOG0882|consen   83 VENF--DMINMIKLVDLPGFAEW-VTSKGDKISLIAVSLFKSGKIFVVDGFGDF--------------------------  133 (558)
T ss_pred             eecc--chhhhcccccCCCceEE-ecCCCCeeeeEEeecccCCCcEEECCcCCc--------------------------
Confidence            7521  11111111111222221 122221  13333 3457889999875422                          


Q ss_pred             CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEeccc------CceeEEEE----------CCeeeEEEEECCC
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAEL------GGMKSEIV----------GNKSFFDVHYSPL  326 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~------~~~~~~~~----------~~~~i~~~~~~p~  326 (391)
                       ......-.-|..+|.++.+.+.+ .+++....|.|.-|....      .+....++          ......++.|+|+
T Consensus       134 -~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~  212 (558)
T KOG0882|consen  134 -CQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPD  212 (558)
T ss_pred             -CccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccc
Confidence             12344455689999999999654 477777889999998772      22222222          2235788999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCC
Q psy2107         327 SKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      +..+.+-+.|..|++++.++++
T Consensus       213 g~qistl~~DrkVR~F~~KtGk  234 (558)
T KOG0882|consen  213 GAQISTLNPDRKVRGFVFKTGK  234 (558)
T ss_pred             cCcccccCcccEEEEEEeccch
Confidence            9999999999999999988764

>KOG1275|consensus

Probab=98.81  E-value=2e-07  Score=85.85  Aligned_cols=183  Identities=12%  Similarity=0.137  Sum_probs=133.2

Q ss_pred             CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107         170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG  249 (391)
Q Consensus       170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~  249 (391)
                      ...++.|+....+..+|++.    ....+...-..+.|+-|.  .+++++.+|...|+|.+-|.++              
T Consensus       147 ~~~~i~Gg~Q~~li~~Dl~~----~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s--------------  206 (1118)
T KOG1275|consen  147 PSTLIMGGLQEKLIHIDLNT----EKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNS--------------  206 (1118)
T ss_pred             Ccceeecchhhheeeeeccc----ceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCc--------------
Confidence            44577777777788888652    222233322233455554  4678899999999999999876              


Q ss_pred             ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC---------CCeEEEEecccCceeEEEECCeeeEE
Q psy2107         250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW---------DHTLKIWDAELGGMKSEIVGNKSFFD  320 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~i~~  320 (391)
                                     .+.++++..|++.|..+... ++.|++++.         |..|++||+++.+.+..+..+....-
T Consensus       207 ---------------~~~iht~~aHs~siSDfDv~-GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~f  270 (1118)
T KOG1275|consen  207 ---------------FETIHTFDAHSGSISDFDVQ-GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQF  270 (1118)
T ss_pred             ---------------Cceeeeeeccccceeeeecc-CCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchh
Confidence                           66889999999999887765 467777764         55689999999888877776665566


Q ss_pred             EEECCC-CCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         321 VHYSPL-SKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       321 ~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +.|.|. ...+++++..|...+-|..+...+ .-+.........+.++++++ ++..++-|..+|.|.+|-
T Consensus       271 lrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSs-n~~alafgd~~g~v~~wa  340 (1118)
T KOG1275|consen  271 LRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISS-NGDALAFGDHEGHVNLWA  340 (1118)
T ss_pred             hhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecC-CCceEEEecccCcEeeec
Confidence            778886 457788888999999995443322 12223333455699999999 778899999999999995

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=98.81  E-value=4.6e-06  Score=82.96  Aligned_cols=215  Identities=10%  Similarity=0.106  Sum_probs=125.0

Q ss_pred             EEEEEec--CCEEEEE-ECCCeEEEEcCCCceEEeccCC-----------------CCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         119 VSAIDFH--NDWILTG-CYDHSVHIWTRRGEHKLNIPGH-----------------GGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       119 V~~~~~~--~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~-----------------~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      -..++++  ++.|+.+ ...+.|+++|..+..+.++.+-                 -..-..+++.|.  ++.++++.+.
T Consensus       626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~--~g~LyVad~~  703 (1057)
T PLN02919        626 PQGLAYNAKKNLLYVADTENHALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPV--NEKVYIAMAG  703 (1057)
T ss_pred             CcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecC--CCeEEEEECC
Confidence            3566775  4544444 4557899999866666554321                 012357888432  5667788888


Q ss_pred             CCcEEEEeecCCCCceeEEEEEec---------------CCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCC
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRG---------------HERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDP  242 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~---------------~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~  242 (391)
                      ++.|++||..  ....   ..+.+               .-.....|+++|+++.| ++-+.++.|++||++++......
T Consensus       704 ~~~I~v~d~~--~g~v---~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~  778 (1057)
T PLN02919        704 QHQIWEYNIS--DGVT---RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA  778 (1057)
T ss_pred             CCeEEEEECC--CCeE---EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence            8999999853  2211   11111               11235679999998844 55566799999999764321000


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC------
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN------  315 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~------  315 (391)
                      .  +......  ....+.........    ..-.....+++++++. +++-+.++.|++||..++.........      
T Consensus       779 g--g~~~~~~--~l~~fG~~dG~g~~----~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~d  850 (1057)
T PLN02919        779 G--GDPTFSD--NLFKFGDHDGVGSE----VLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKD  850 (1057)
T ss_pred             e--cccccCc--ccccccCCCCchhh----hhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCC
Confidence            0  0000000  00000000000000    0111235788886665 555677899999999877655332211      


Q ss_pred             --------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         316 --------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       316 --------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                              .....++++++|+++++-+.++.|++||+.++.
T Consensus       851 G~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~  891 (1057)
T PLN02919        851 GKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGE  891 (1057)
T ss_pred             CcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCc
Confidence                    145689999999998888899999999998754

>KOG1912|consensus

Probab=98.78  E-value=5.4e-07  Score=81.64  Aligned_cols=229  Identities=10%  Similarity=0.076  Sum_probs=138.5

Q ss_pred             CCCCcEEEEEec--------------CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCC-eEEEEEe
Q psy2107         114 LHDDWVSAIDFH--------------NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKD-AAFISVS  177 (391)
Q Consensus       114 ~h~~~V~~~~~~--------------~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~-~~l~s~~  177 (391)
                      .|...|+.+.|.              .-+||++...|.|.+||. ....+..+..|..++..++|.|..++. ..|++-.
T Consensus        53 ~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh  132 (1062)
T KOG1912|consen   53 LHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIH  132 (1062)
T ss_pred             cCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEec
Confidence            466778888774              116788888899999998 566667788899999999999977666 5778888


Q ss_pred             CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         178 TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       178 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      ...++.+|+..    +++.......-.....|+.+.| +.+.+..-+..|.+.+-+.-..++...+............-.
T Consensus       133 ~ss~lvLwntd----tG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~  208 (1062)
T KOG1912|consen  133 GSSTLVLWNTD----TGEKFWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLA  208 (1062)
T ss_pred             CCcEEEEEEcc----CCceeeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchh
Confidence            88999999843    3344555544445677799988 566777777778877776543222111100000000000000


Q ss_pred             cccccCCCCCceeeecCcc---CcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC--CCE
Q psy2107         257 KEYSSASSRTPLITLKGHK---EAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL--SKL  329 (391)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~--~~~  329 (391)
                      +......+......-+...   ...-.++|+|.-+ ++-......+.++|++-..++.....+. .+.-+.+-|+  ...
T Consensus       209 ~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~  288 (1062)
T KOG1912|consen  209 HLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDA  288 (1062)
T ss_pred             hhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcce
Confidence            0000000000000000000   0012345565433 5556677889999999888887776554 3444555555  458


Q ss_pred             EEEeeCCCcEEEEcCCC
Q psy2107         330 VITASADKQIRLYDPKV  346 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~  346 (391)
                      |.++..||.+.+|--+.
T Consensus       289 LfclH~nG~ltirvrk~  305 (1062)
T KOG1912|consen  289 LFCLHSNGRLTIRVRKE  305 (1062)
T ss_pred             EEEEecCCeEEEEEeec
Confidence            99999999999997543

>KOG1912|consensus

Probab=98.78  E-value=2.7e-06  Score=77.29  Aligned_cols=238  Identities=10%  Similarity=0.059  Sum_probs=152.3

Q ss_pred             CCCcEEEEEecCC-EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC-------C--CCeEEEEEeCCCcEE
Q psy2107         115 HDDWVSAIDFHND-WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND-------G--KDAAFISVSTDQTAM  183 (391)
Q Consensus       115 h~~~V~~~~~~~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~-------~--~~~~l~s~~~dg~v~  183 (391)
                      |...-.++.|++. ++|-|+. ..|.+-|. +-+.+..+.-|...|+.+.|.|..       +  ..-+||++...|.|.
T Consensus        14 ~~sN~~A~Dw~~~GLiAygsh-slV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi   92 (1062)
T KOG1912|consen   14 SRSNRNAADWSPSGLIAYGSH-SLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII   92 (1062)
T ss_pred             CcccccccccCccceEEEecC-ceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence            4444667788844 6665554 57777787 667777888999999999998741       1  233678888899999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcC---CC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSE---SR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      +||...    ...+..+..|.+++..++|-+   +. ..|++-.....|.+|+..+|...                    
T Consensus        93 l~d~~~----~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~--------------------  148 (1062)
T KOG1912|consen   93 LVDFVL----ASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKF--------------------  148 (1062)
T ss_pred             EEEehh----hhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCcee--------------------
Confidence            999652    234556677889999999976   23 45666667789999999886542                    


Q ss_pred             ccCCCCCceeeecCccCcccEEEecc--CCeEEEEECCCeEEEEeccc-------CceeEEEECC---------------
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAEL-------GGMKSEIVGN---------------  315 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~-------~~~~~~~~~~---------------  315 (391)
                               ...........|+.+.|  ...+..-+..|.+-+-+.--       ++..+.-..+               
T Consensus       149 ---------Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns  219 (1062)
T KOG1912|consen  149 ---------WKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNS  219 (1062)
T ss_pred             ---------eccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhcccc
Confidence                     22222233444555553  23344445555555554321       1111111110               


Q ss_pred             -----e------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC-CCEEEEeeCCC
Q psy2107         316 -----K------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDN  383 (391)
Q Consensus       316 -----~------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg  383 (391)
                           .      -...++|+|.-+-++-......+.++|++...   ++....--.+.+.-+.|-|+. ...|...-.||
T Consensus       220 ~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~---~l~vvpier~~akfv~vlP~~~rd~LfclH~nG  296 (1062)
T KOG1912|consen  220 TTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYEC---CLAVVPIERGGAKFVDVLPDPRRDALFCLHSNG  296 (1062)
T ss_pred             ccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhc---eeEEEEeccCCcceeEeccCCCcceEEEEecCC
Confidence                 0      01246678876544445567889999988655   555555555666777787743 33688888999


Q ss_pred             cEEEEe
Q psy2107         384 SVKLWD  389 (391)
Q Consensus       384 ~v~iwd  389 (391)
                      .+.+|-
T Consensus       297 ~ltirv  302 (1062)
T KOG1912|consen  297 RLTIRV  302 (1062)
T ss_pred             eEEEEE
Confidence            999995

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.77  E-value=3e-05  Score=68.91  Aligned_cols=107  Identities=19%  Similarity=0.242  Sum_probs=76.2

Q ss_pred             ccEEEec--cCCeEEEE----ECCCe----EEEEecccCce----eEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         278 ISAVQWT--AVDEIITS----SWDHT----LKIWDAELGGM----KSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       278 v~~~~~~--~~~~l~s~----~~dg~----i~iwd~~~~~~----~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      ..++.|+  .+..+.+.    +.+|.    -.+|++...+.    +..+.....+.+++++|+...++.|+.||+|.+||
T Consensus       208 Pl~~~Fs~~~~~qi~tVE~s~s~~g~~~~d~ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD  287 (545)
T PF11768_consen  208 PLDVEFSLNQPYQIHTVEQSISVKGEPSADSCIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYD  287 (545)
T ss_pred             cEEEEccCCCCcEEEEEEEecCCCCCceeEEEEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEE
Confidence            3566666  33344443    33443    34566654432    33455677899999999999999999999999999


Q ss_pred             CCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ...+.     ..+..+.-.++.++|+| ++.+++.|+.-|.+.+||+
T Consensus       288 ~~~~~-----t~~~ka~~~P~~iaWHp-~gai~~V~s~qGelQ~FD~  328 (545)
T PF11768_consen  288 TTRGV-----TLLAKAEFIPTLIAWHP-DGAIFVVGSEQGELQCFDM  328 (545)
T ss_pred             cCCCe-----eeeeeecccceEEEEcC-CCcEEEEEcCCceEEEEEe
Confidence            86543     12223445689999999 6678999999999999996

>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain

Probab=98.76  E-value=3.6e-05  Score=66.28  Aligned_cols=247  Identities=13%  Similarity=0.045  Sum_probs=135.9

Q ss_pred             eEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC-------CCCcccCCCCcEEEEEecCCEEEEEE-C-CCeEE
Q psy2107          69 DFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP-------SPLDCILHDDWVSAIDFHNDWILTGC-Y-DHSVH  139 (391)
Q Consensus        69 ~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~V~~~~~~~~~l~t~~-~-dg~i~  139 (391)
                      -++++|+.++..-.-|-+..-......+.+++.......       .|....+-......+.-+|++|+... . +..|.
T Consensus        52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~  131 (352)
T TIGR02658        52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVG  131 (352)
T ss_pred             eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEE
Confidence            367788766432221111111224456666665433321       11111222233445555588777665 3 68999


Q ss_pred             EEcCCCceE-EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE---EecCCCCe-EEEEEcC
Q psy2107         140 IWTRRGEHK-LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV---CRGHERGL-ETVTVSE  214 (391)
Q Consensus       140 iwd~~~~~~-~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~---~~~~~~~v-~~l~~~~  214 (391)
                      +.|+...++ ..+.- .+...-...   ++..  +.+-+.||......+.....  .....   +.....++ ..-.|.+
T Consensus       132 VvD~~~~kvv~ei~v-p~~~~vy~t---~e~~--~~~~~~Dg~~~~v~~d~~g~--~~~~~~~vf~~~~~~v~~rP~~~~  203 (352)
T TIGR02658       132 VVDLEGKAFVRMMDV-PDCYHIFPT---ANDT--FFMHCRDGSLAKVGYGTKGN--PKIKPTEVFHPEDEYLINHPAYSN  203 (352)
T ss_pred             EEECCCCcEEEEEeC-CCCcEEEEe---cCCc--cEEEeecCceEEEEecCCCc--eEEeeeeeecCCccccccCCceEc
Confidence            999955444 44442 222222222   2222  22345577766655432222  11111   11100000 0003455


Q ss_pred             -CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-------CccCcccEEEecc-
Q psy2107         215 -SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-------GHKEAISAVQWTA-  285 (391)
Q Consensus       215 -~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~-  285 (391)
                       +++++..... |.|.+.|+.......                        ......+.       -..+.+.-+++++ 
T Consensus       204 ~dg~~~~vs~e-G~V~~id~~~~~~~~------------------------~~~~~~~~~~~~~~~wrP~g~q~ia~~~d  258 (352)
T TIGR02658       204 KSGRLVWPTYT-GKIFQIDLSSGDAKF------------------------LPAIEAFTEAEKADGWRPGGWQQVAYHRA  258 (352)
T ss_pred             CCCcEEEEecC-CeEEEEecCCCccee------------------------cceeeeccccccccccCCCcceeEEEcCC
Confidence             7877777666 999999975533211                        11111111       0223344588884 


Q ss_pred             CCeEEEEE----------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCcEEEEcCCCCC
Q psy2107         286 VDEIITSS----------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQIRLYDPKVKE  348 (391)
Q Consensus       286 ~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~i~iwd~~~~~  348 (391)
                      +++++...          ..+.|.++|..+++.+..+.....+..++++||++ +|++.. .++.|.++|..+.+
T Consensus       259 g~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k  333 (352)
T TIGR02658       259 RDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGK  333 (352)
T ss_pred             CCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCe
Confidence            45666532          12579999999999999999888999999999999 777665 57889999988766

This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.

>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation []

Probab=98.75  E-value=1.2e-05  Score=78.66  Aligned_cols=243  Identities=15%  Similarity=0.205  Sum_probs=143.0

Q ss_pred             CCCcEEEEEec--CCEEEEEEC---C---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCY---D---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAM  183 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~---d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~  183 (391)
                      +.+.-..|+|-  |.++|+.+.   .   ..+|||+-+|.....-..-.+--.+++|   .|.|+++|+...   ...|.
T Consensus       208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~ReG~L~stSE~v~gLe~~l~W---rPsG~lIA~~q~~~~~~~Vv  284 (928)
T PF04762_consen  208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSREGELQSTSEPVDGLEGALSW---RPSGNLIASSQRLPDRHDVV  284 (928)
T ss_pred             cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCCceEEeccccCCCccCCccC---CCCCCEEEEEEEcCCCcEEE
Confidence            45556678886  568888875   3   4799999987765555555555668999   778999988765   34566


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +|.-+ +-..++....+......|..++|++++..||..-.|. |.+|-..+-.-                         
T Consensus       285 FfErN-GLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW-------------------------  337 (928)
T PF04762_consen  285 FFERN-GLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW-------------------------  337 (928)
T ss_pred             EEecC-CcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE-------------------------
Confidence            66521 1111122222223456899999999999999977665 99998865221                         


Q ss_pred             CCCceeeec-CccCcccEEEeccC--CeEEEEECCCeEEEEec-------------------------------ccCc--
Q psy2107         264 SRTPLITLK-GHKEAISAVQWTAV--DEIITSSWDHTLKIWDA-------------------------------ELGG--  307 (391)
Q Consensus       264 ~~~~~~~~~-~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~-------------------------------~~~~--  307 (391)
                        -..+.+. .....+..+.|++.  ..|...+.+|.+..++.                               +...  
T Consensus       338 --YLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VP  415 (928)
T PF04762_consen  338 --YLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVP  415 (928)
T ss_pred             --EEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCC
Confidence              0111111 11222333666632  23444444444443332                               2111  


Q ss_pred             ---eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc-----eEEEEec----------cccCcEEEEEEC
Q psy2107         308 ---MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA-----IVKSTFS----------SHKEWVQSVRWS  369 (391)
Q Consensus       308 ---~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~-----~~~~~~~----------~h~~~v~~~~~~  369 (391)
                         ....+..+.+|.+++|++++..+++-..||.|.+|........     .....+.          .-...+..++|.
T Consensus       416 PPMs~~~l~~~~~v~~vaf~~~~~~~avl~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  495 (928)
T PF04762_consen  416 PPMSSYELELPSPVNDVAFSPSNSRFAVLTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWL  495 (928)
T ss_pred             chHhceEEcCCCCcEEEEEeCCCCeEEEEECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEe
Confidence               1122334567999999999888888899999999985443211     1111111          123457888888


Q ss_pred             CCCCCEEEEeeCC---CcEEEEec
Q psy2107         370 PIDPQLFVSASFD---NSVKLWDL  390 (391)
Q Consensus       370 ~~~~~~l~s~~~d---g~v~iwdl  390 (391)
                      . ...+++....+   +.+.++++
T Consensus       496 ~-~~~~~~~~~~~~~~~~i~~~~~  518 (928)
T PF04762_consen  496 N-DDTLLVLSDSDSNQSKIVLVDI  518 (928)
T ss_pred             C-CCEEEEEEecCcccceEEEEEe
Confidence            7 44444444443   45666553

>KOG1920|consensus

Probab=98.73  E-value=7.7e-06  Score=78.13  Aligned_cols=238  Identities=10%  Similarity=0.164  Sum_probs=146.1

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC--
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES--  191 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--  191 (391)
                      .+.|.++.|.  +..++.+..+|.|.+-|...........-...|.+++|   ++++..++..+..+++.+-......  
T Consensus        68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aasw---S~Dee~l~liT~~~tll~mT~~f~~i~  144 (1265)
T KOG1920|consen   68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASW---SPDEELLALITGRQTLLFMTKDFEPIA  144 (1265)
T ss_pred             CcceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEee---cCCCcEEEEEeCCcEEEEEeccccchh
Confidence            3689999997  66888999999999999866666555556788999999   7788889888888888765421000  


Q ss_pred             -----------C------ceeEEEEEecC---------------------CCCeEEEEEcCCCCEEEEE-----eCCCcE
Q psy2107         192 -----------N------SIECIHVCRGH---------------------ERGLETVTVSESRQQFATG-----GWDCLL  228 (391)
Q Consensus       192 -----------~------~~~~~~~~~~~---------------------~~~v~~l~~~~~~~~l~sg-----~~dg~i  228 (391)
                                 +      =++.-..+.|.                     .+.=+++.|-.+|+++++.     ...+.|
T Consensus       145 E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rki  224 (1265)
T KOG1920|consen  145 EKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKI  224 (1265)
T ss_pred             ccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeE
Confidence                       0      00000112110                     1122458999999999883     233789


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEE----ECCCeEEEEecc
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS----SWDHTLKIWDAE  304 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~----~~dg~i~iwd~~  304 (391)
                      ++||-+ +....                       ...+      ....-.+++|-|.|.++++    +.|+.|.+|.- 
T Consensus       225 rV~drE-g~Lns-----------------------~se~------~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-  273 (1265)
T KOG1920|consen  225 RVYDRE-GALNS-----------------------TSEP------VEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-  273 (1265)
T ss_pred             EEeccc-chhhc-----------------------ccCc------ccccccceeecCCCCeEeeeeecCCCCcEEEEec-
Confidence            999986 22210                       0111      1222347888887775554    35667888873 


Q ss_pred             cCceeEE----EECCe-eeEEEEECCCCCEEEE---eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         305 LGGMKSE----IVGNK-SFFDVHYSPLSKLVIT---ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       305 ~~~~~~~----~~~~~-~i~~~~~~p~~~~l~~---g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      +|-.-..    +.... ++..++|+.++..|++   ......|++|-+.... ..+...+.-.....  +.|+|.....+
T Consensus       274 NGL~hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh-WYLKq~l~~~~~~~--~~W~p~~~~~L  350 (1265)
T KOG1920|consen  274 NGLRHGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH-WYLKQELQFSQKAL--LMWDPVTEKTL  350 (1265)
T ss_pred             CCccccccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeE-EEEEEEEecccccc--ccccCCCceeE
Confidence            3332222    22223 4899999999999887   4445559999875432 22223332222222  77888555545


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      ..-..+|...++|+
T Consensus       351 ~v~~~sG~~~v~~~  364 (1265)
T KOG1920|consen  351 HVLRESGQRLVRDF  364 (1265)
T ss_pred             EEEecCCcEEEEEE
Confidence            54446666666553

>KOG2041|consensus

Probab=98.73  E-value=7.6e-08  Score=86.23  Aligned_cols=168  Identities=17%  Similarity=0.209  Sum_probs=118.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW  283 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  283 (391)
                      .....|++|+.+..++++|+.||.+++..+.+.........              .....+...-+++.+|...|.-+.|
T Consensus        14 nvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~g--------------laa~snLsmNQtLeGH~~sV~vvTW   79 (1189)
T KOG2041|consen   14 NVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSG--------------LAAASNLSMNQTLEGHNASVMVVTW   79 (1189)
T ss_pred             CceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccc--------------cccccccchhhhhccCcceEEEEEe
Confidence            34678999999999999999999999999876443221100              1111223344678899999999999


Q ss_pred             cc-CCeEEEEECCCeEEEEecccCceeEEE---ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         284 TA-VDEIITSSWDHTLKIWDAELGGMKSEI---VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       284 ~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      +. ...|-++..+|.|.+|-+-.|.-...+   +..+.|.+++|..+|..++....||.|.+=.+....  ..-..+.+ 
T Consensus        80 Ne~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNR--IwgKeLkg-  156 (1189)
T KOG2041|consen   80 NENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNR--IWGKELKG-  156 (1189)
T ss_pred             ccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccce--ecchhcch-
Confidence            95 455778888999999999877644333   233478899999999999999999988776654322  11112222 


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .....+.|++|. ..+..+-..|.+.++|.
T Consensus       157 -~~l~hv~ws~D~-~~~Lf~~ange~hlydn  185 (1189)
T KOG2041|consen  157 -QLLAHVLWSEDL-EQALFKKANGETHLYDN  185 (1189)
T ss_pred             -heccceeecccH-HHHHhhhcCCcEEEecc
Confidence             124578899954 45666667788888875

>KOG1008|consensus

Probab=98.70  E-value=5.5e-09  Score=92.12  Aligned_cols=207  Identities=18%  Similarity=0.245  Sum_probs=130.8

Q ss_pred             CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEe----CCCcEE
Q psy2107         155 GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGG----WDCLLK  229 (391)
Q Consensus       155 ~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~----~dg~i~  229 (391)
                      ...+.|+++... .+...++.|..+|.|.+-.++....  .......+|....++++|++ |.+.||+|-    .|..+.
T Consensus        56 tqy~kcva~~y~-~d~cIlavG~atG~I~l~s~r~~hd--Ss~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~  132 (783)
T KOG1008|consen   56 TQYVKCVASFYG-NDRCILAVGSATGNISLLSVRHPHD--SSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLK  132 (783)
T ss_pred             CCCceeehhhcC-CchhhhhhccccCceEEeecCCccc--ccceecccccccccccccccccHHHHHhhhhhhcccCCcc
Confidence            455677777553 2346889999999999987653322  22344567888999999998 455666663    356799


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECCCeEEEEecccCce
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGM  308 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~  308 (391)
                      |||+.+.-....                       ..+.. ..+......+++|. ....+++|.....+.++|++....
T Consensus       133 Iwdi~s~ltvPk-----------------------e~~~f-s~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~  188 (783)
T KOG1008|consen  133 IWDINSLLTVPK-----------------------ESPLF-SSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD  188 (783)
T ss_pred             ceecccccCCCc-----------------------ccccc-ccccccCccccccccCcchhhcccccchhhhhhhhhhhh
Confidence            999976422100                       00000 00122334478888 444578888888999999984433


Q ss_pred             eEEEECCeeeEEEEECC-CCCEEEEeeCCCcEEEEcC-CCCCcceEEEEeccc----cCcEEEEEECCCCCCEEEEeeCC
Q psy2107         309 KSEIVGNKSFFDVHYSP-LSKLVITASADKQIRLYDP-KVKEGAIVKSTFSSH----KEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       309 ~~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~-~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      .......+.+..+.+.| .++|+++-. ||.|.+||. +.-+.  ++..+...    ...+..++|+|....++++...|
T Consensus       189 ~~~svnTk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~rnien--pl~~i~~~~N~~~~~l~~~aycPtrtglla~l~Rd  265 (783)
T KOG1008|consen  189 SVSSVNTKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYRNIEN--PLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRD  265 (783)
T ss_pred             hhhhhhhhhcccceecCCCCCceeccc-cCceeeccchhhhcc--HHHHHhhCCCCcccceeeEEeccCCcchhhhhccC
Confidence            22222223456677788 577887765 999999993 32221  11122111    22489999999776778888766


Q ss_pred             -CcEEEEecC
Q psy2107         383 -NSVKLWDLR  391 (391)
Q Consensus       383 -g~v~iwdlr  391 (391)
                       ++|+++|++
T Consensus       266 S~tIrlydi~  275 (783)
T KOG1008|consen  266 SITIRLYDIC  275 (783)
T ss_pred             cceEEEeccc
Confidence             678988874

>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]

Probab=98.69  E-value=8.8e-06  Score=69.91  Aligned_cols=168  Identities=14%  Similarity=0.131  Sum_probs=119.3

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC-cEEEEeecCCCCceeEEEEEecCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ-TAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      |++++..|. |...|.+.......++ +|.+.|.-..+   ..+..-++.|..|| .+-|+|.+  +   ..+..+...-
T Consensus       332 Gd~ia~VSR-GkaFi~~~~~~~~iqv-~~~~~VrY~r~---~~~~e~~vigt~dgD~l~iyd~~--~---~e~kr~e~~l  401 (668)
T COG4946         332 GDYIALVSR-GKAFIMRPWDGYSIQV-GKKGGVRYRRI---QVDPEGDVIGTNDGDKLGIYDKD--G---GEVKRIEKDL  401 (668)
T ss_pred             CcEEEEEec-CcEEEECCCCCeeEEc-CCCCceEEEEE---ccCCcceEEeccCCceEEEEecC--C---ceEEEeeCCc
Confidence            888888876 6777777754444444 46667887777   55666789999999 89999943  2   2344556667


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      +.|.+++.+++|++++.+.....|.+.|++++..                             ...-+...+-|+.+.|+
T Consensus       402 g~I~av~vs~dGK~~vvaNdr~el~vididngnv-----------------------------~~idkS~~~lItdf~~~  452 (668)
T COG4946         402 GNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV-----------------------------RLIDKSEYGLITDFDWH  452 (668)
T ss_pred             cceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe-----------------------------eEecccccceeEEEEEc
Confidence            8899999999999999999989999999988553                             22233456678999999


Q ss_pred             cCCeEEE-EEC----CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEE
Q psy2107         285 AVDEIIT-SSW----DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       285 ~~~~l~s-~~~----dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~  332 (391)
                      |++++++ +--    ...|+++|+..++..........=.+-+|.|++++|.-
T Consensus       453 ~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~d~ryLYf  505 (668)
T COG4946         453 PNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDPDGRYLYF  505 (668)
T ss_pred             CCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCCCCcEEEE
Confidence            8777443 333    45799999998876554433333344567777776543

>KOG1832|consensus

Probab=98.66  E-value=2.3e-08  Score=91.53  Aligned_cols=190  Identities=16%  Similarity=0.211  Sum_probs=129.8

Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-  226 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-  226 (391)
                      ...+..|....+|++|   +...+.|+.|+..|.|+++++.    .+.......+|..+|+-+.-+.+|..+++.+.-. 
T Consensus      1094 w~~frd~~~~fTc~af---s~~~~hL~vG~~~Geik~~nv~----sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~ 1166 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAF---SGGTNHLAVGSHAGEIKIFNVS----SGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSS 1166 (1516)
T ss_pred             chhhhccccceeeEEe---ecCCceEEeeeccceEEEEEcc----CccccccccccccccccccccCCcceeeeeccccC
Confidence            3456678899999999   7778899999999999999965    3344566788999999999999998877665432 


Q ss_pred             -cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecc
Q psy2107         227 -LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE  304 (391)
Q Consensus       227 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~  304 (391)
                       -..+|++..                            ...+.+++.+    -.++.|+.... -+.|+......+||+.
T Consensus      1167 PlsaLW~~~s----------------------------~~~~~Hsf~e----d~~vkFsn~~q~r~~gt~~d~a~~YDvq 1214 (1516)
T KOG1832|consen 1167 PLSALWDASS----------------------------TGGPRHSFDE----DKAVKFSNSLQFRALGTEADDALLYDVQ 1214 (1516)
T ss_pred             chHHHhcccc----------------------------ccCccccccc----cceeehhhhHHHHHhcccccceEEEecc
Confidence             357898853                            1224444432    24677774332 4455555778999999


Q ss_pred             cCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         305 LGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       305 ~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      ++..+.++-..     ..-.+..|+|+..+++   .||.  +||++..+   .++.+..... -..-.|+| .+.-++.-
T Consensus      1215 T~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndGv--LWDvR~~~---aIh~FD~ft~-~~~G~FHP-~g~eVIIN 1284 (1516)
T KOG1832|consen 1215 TCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDGV--LWDVRIPE---AIHRFDQFTD-YGGGGFHP-SGNEVIIN 1284 (1516)
T ss_pred             cCcHHHHhcCcchhhhhhccccccCCCcceEe---eCce--eeeeccHH---HHhhhhhhee-cccccccC-CCceEEee
Confidence            99887774322     1346789999988876   4664  79988754   4444443332 22335889 44445554


Q ss_pred             eCCCcEEEEecC
Q psy2107         380 SFDNSVKLWDLR  391 (391)
Q Consensus       380 ~~dg~v~iwdlr  391 (391)
                      +     -|||+|
T Consensus      1285 S-----EIwD~R 1291 (1516)
T KOG1832|consen 1285 S-----EIWDMR 1291 (1516)
T ss_pred             c-----hhhhhH
Confidence            4     378775

>KOG1920|consensus

Probab=98.61  E-value=2.8e-05  Score=74.49  Aligned_cols=225  Identities=12%  Similarity=0.239  Sum_probs=128.1

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD-  234 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~-  234 (391)
                      ..|.++.|   -.+...++.+..+|.|.+-|..  +...+.+..   -...|.+++|+|+++.++..+.++++.+-+-. 
T Consensus        69 ~~i~s~~f---l~d~~~i~v~~~~G~iilvd~e--t~~~eivg~---vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f  140 (1265)
T KOG1920|consen   69 DEIVSVQF---LADTNSICVITALGDIILVDPE--TLELEIVGN---VDNGISAASWSPDEELLALITGRQTLLFMTKDF  140 (1265)
T ss_pred             cceEEEEE---ecccceEEEEecCCcEEEEccc--ccceeeeee---ccCceEEEeecCCCcEEEEEeCCcEEEEEeccc
Confidence            57889999   4466678888899999998733  333333333   35789999999999999999988888764431 


Q ss_pred             ---CCCCC-CCCCCCCCCCccc-cccccccc--cC--CCCCceeeec-----CccCcccEEEeccCCe-EEEE----ECC
Q psy2107         235 ---ISKER-GDPSENGDEGTTS-KKRKKEYS--SA--SSRTPLITLK-----GHKEAISAVQWTAVDE-IITS----SWD  295 (391)
Q Consensus       235 ---~~~~~-~~~~~~~~~~~~~-~~~~~~~~--~~--~~~~~~~~~~-----~~~~~v~~~~~~~~~~-l~s~----~~d  295 (391)
                         ..+.. .+....+...... .++...+.  ..  ..+......+     ...+.=+.+.|-.++. +++.    -.+
T Consensus       141 ~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~  220 (1265)
T KOG1920|consen  141 EPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETG  220 (1265)
T ss_pred             cchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCC
Confidence               11111 0000000000000 00000000  00  0000110000     0112235689997675 4442    234


Q ss_pred             -CeEEEEecccCceeEEEEC-CeeeEEEEECCCCCEEEEe---eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         296 -HTLKIWDAELGGMKSEIVG-NKSFFDVHYSPLSKLVITA---SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       296 -g~i~iwd~~~~~~~~~~~~-~~~i~~~~~~p~~~~l~~g---~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                       ..|++||-. |.+-.+-.. ..--.+++|-|.|..+++-   +.|+.|.+|.-+..........+......|..++|+.
T Consensus       221 ~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~L~Wns  299 (1265)
T KOG1920|consen  221 TRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEELAWNS  299 (1265)
T ss_pred             ceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccccchheeeecC
Confidence             799999977 443222211 1234679999999998875   3466899998654332223333444455699999999


Q ss_pred             CCCCEEEE---eeCCCcEEEEec
Q psy2107         371 IDPQLFVS---ASFDNSVKLWDL  390 (391)
Q Consensus       371 ~~~~~l~s---~~~dg~v~iwdl  390 (391)
                       ++.+|+.   ......|++|-+
T Consensus       300 -~sdiLAv~~~~~e~~~v~lwt~  321 (1265)
T KOG1920|consen  300 -NSDILAVVTSNLENSLVQLWTT  321 (1265)
T ss_pred             -CCCceeeeecccccceEEEEEe
Confidence             6667776   444555999964

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.61  E-value=8.3e-05  Score=61.66  Aligned_cols=207  Identities=16%  Similarity=0.043  Sum_probs=120.5

Q ss_pred             CCeEEEEcC-CCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107         135 DHSVHIWTR-RGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV  210 (391)
Q Consensus       135 dg~i~iwd~-~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l  210 (391)
                      +|+|..||. +++.+....-   ....+.. ..    .++..+++++.++.+..||..    +++.+..+.. ...+...
T Consensus         2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~----~~~~~v~~~~~~~~l~~~d~~----tG~~~W~~~~-~~~~~~~   71 (238)
T PF13360_consen    2 DGTLSALDPRTGKELWSYDLGPGIGGPVAT-AV----PDGGRVYVASGDGNLYALDAK----TGKVLWRFDL-PGPISGA   71 (238)
T ss_dssp             TSEEEEEETTTTEEEEEEECSSSCSSEEET-EE----EETTEEEEEETTSEEEEEETT----TSEEEEEEEC-SSCGGSG
T ss_pred             CCEEEEEECCCCCEEEEEECCCCCCCccce-EE----EeCCEEEEEcCCCEEEEEECC----CCCEEEEeec-cccccce
Confidence            689999998 7777776542   1222211 11    134567777899999999943    3344555443 2221111


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCc----c-CcccEEEec
Q psy2107         211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGH----K-EAISAVQWT  284 (391)
Q Consensus       211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~-~~v~~~~~~  284 (391)
                      . ...+..++.++.++.|..+|..+++.                             +... ...    . .......+ 
T Consensus        72 ~-~~~~~~v~v~~~~~~l~~~d~~tG~~-----------------------------~W~~~~~~~~~~~~~~~~~~~~-  120 (238)
T PF13360_consen   72 P-VVDGGRVYVGTSDGSLYALDAKTGKV-----------------------------LWSIYLTSSPPAGVRSSSSPAV-  120 (238)
T ss_dssp             E-EEETTEEEEEETTSEEEEEETTTSCE-----------------------------EEEEEE-SSCTCSTB--SEEEE-
T ss_pred             e-eecccccccccceeeeEecccCCcce-----------------------------eeeeccccccccccccccCceE-
Confidence            1 22345677777888999999887654                             2221 111    0 01112222 


Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCe-e----e-------EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-S----F-------FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~----i-------~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      .++.++.+..++.|..+|+++|+.+....... .    +       ..+.+. ++ .+..++.++.+.-+|+.+++   .
T Consensus       121 ~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~d~~tg~---~  195 (238)
T PF13360_consen  121 DGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAVDLATGE---K  195 (238)
T ss_dssp             ETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEEEEETTTTE---E
T ss_pred             ecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEEEEECCCCC---E
Confidence            25778888889999999999999988887643 1    1       223333 34 66666667754444988765   2


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .....  ...+..+ ..+.++ .|+.++.++.|..||++
T Consensus       196 ~w~~~--~~~~~~~-~~~~~~-~l~~~~~~~~l~~~d~~  230 (238)
T PF13360_consen  196 LWSKP--ISGIYSL-PSVDGG-TLYVTSSDGRLYALDLK  230 (238)
T ss_dssp             EEEEC--SS-ECEC-EECCCT-EEEEEETTTEEEEEETT
T ss_pred             EEEec--CCCccCC-ceeeCC-EEEEEeCCCEEEEEECC
Confidence            22222  2223332 233244 56666689999999975

...

>KOG1832|consensus

Probab=98.58  E-value=5.6e-08  Score=89.13  Aligned_cols=194  Identities=15%  Similarity=0.150  Sum_probs=132.5

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iw  185 (391)
                      .+..|+..-+|++|+  .+.|+.|+..|.|+++++ +|........|..+|+-+.-   +.+|..+++.+.-.  -..+|
T Consensus      1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~veP---s~dgs~~Ltsss~S~PlsaLW 1172 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEP---SVDGSTQLTSSSSSSPLSALW 1172 (1516)
T ss_pred             hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccc---cCCcceeeeeccccCchHHHh
Confidence            344588899999999  449999999999999999 67777788899999999886   66777666554433  46789


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      ++.  . .+...+.+.    .-.++.|+.....-+.|.......+||+.+......+                       
T Consensus      1173 ~~~--s-~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~ty----------------------- 1222 (1516)
T KOG1832|consen 1173 DAS--S-TGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTY----------------------- 1222 (1516)
T ss_pred             ccc--c-ccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHh-----------------------
Confidence            854  2 444555544    3457888876555556666667899999885542210                       


Q ss_pred             CceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         266 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                        +....+.+..-.+..|+|...|+.  .||  .+||++..+.+..|..-.--..-.|+|.|.-++.-+.     |||++
T Consensus      1223 --lt~~~~~~y~~n~a~FsP~D~LIl--ndG--vLWDvR~~~aIh~FD~ft~~~~G~FHP~g~eVIINSE-----IwD~R 1291 (1516)
T KOG1832|consen 1223 --LTDTVTSSYSNNLAHFSPCDTLIL--NDG--VLWDVRIPEAIHRFDQFTDYGGGGFHPSGNEVIINSE-----IWDMR 1291 (1516)
T ss_pred             --cCcchhhhhhccccccCCCcceEe--eCc--eeeeeccHHHHhhhhhheecccccccCCCceEEeech-----hhhhH
Confidence              000111122236777887766554  345  3799998877766654443334578999998887653     89988


Q ss_pred             CCC
Q psy2107         346 VKE  348 (391)
Q Consensus       346 ~~~  348 (391)
                      +-.
T Consensus      1292 TF~ 1294 (1516)
T KOG1832|consen 1292 TFK 1294 (1516)
T ss_pred             HHH
Confidence            754

>KOG0882|consensus

Probab=98.56  E-value=7.2e-07  Score=75.80  Aligned_cols=202  Identities=15%  Similarity=0.131  Sum_probs=137.7

Q ss_pred             CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEE
Q psy2107         153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-NSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKI  230 (391)
Q Consensus       153 ~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~i  230 (391)
                      -|...|+.+..    ...+++.+++.||.++.|.-  .. ...+.+..+..|...|.+++.+.++.++.+++. |..+++
T Consensus         7 mhrd~i~hv~~----tka~fiiqASlDGh~KFWkK--s~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~Kv   80 (558)
T KOG0882|consen    7 MHRDVITHVFP----TKAKFIIQASLDGHKKFWKK--SRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKV   80 (558)
T ss_pred             cccceeeeEee----ehhheEEeeecchhhhhcCC--CCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeE
Confidence            36777777654    24678999999999999972  22 334566677789999999999999999999877 999999


Q ss_pred             EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--cCC---eEEEE-ECCCeEEEEecc
Q psy2107         231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVD---EIITS-SWDHTLKIWDAE  304 (391)
Q Consensus       231 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~---~l~s~-~~dg~i~iwd~~  304 (391)
                      +|+++-....                           ...+.--.+   .+.|.  ++.   .++.+ -.++.+.++|-.
T Consensus        81 fDvEn~Dmin---------------------------miKL~~lPg---~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~  130 (558)
T KOG0882|consen   81 FDVENFDMIN---------------------------MIKLVDLPG---FAEWVTSKGDKISLIAVSLFKSGKIFVVDGF  130 (558)
T ss_pred             EEeeccchhh---------------------------hcccccCCC---ceEEecCCCCeeeeEEeecccCCCcEEECCc
Confidence            9997633211                           011111111   22222  221   23333 457899999976


Q ss_pred             cCce-eEEE--ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC----Cc--------ceEEEEeccccCcEEEEEEC
Q psy2107         305 LGGM-KSEI--VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK----EG--------AIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       305 ~~~~-~~~~--~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~----~~--------~~~~~~~~~h~~~v~~~~~~  369 (391)
                      ...+ ..-+  .+..+|.++.+.|.+..+++....|.|.-|.....    +.        ..-+..+.......+++.|+
T Consensus       131 ~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efs  210 (558)
T KOG0882|consen  131 GDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFS  210 (558)
T ss_pred             CCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEc
Confidence            5432 2222  23459999999999999999988999999987630    00        00111223345678999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEecC
Q psy2107         370 PIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      | .+..+.+-+.|..|++++++
T Consensus       211 p-~g~qistl~~DrkVR~F~~K  231 (558)
T KOG0882|consen  211 P-DGAQISTLNPDRKVRGFVFK  231 (558)
T ss_pred             c-ccCcccccCcccEEEEEEec
Confidence            9 55678999999999999864

>KOG2114|consensus

Probab=98.56  E-value=1.1e-05  Score=74.31  Aligned_cols=192  Identities=13%  Similarity=0.143  Sum_probs=124.6

Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG-LETVTVSESRQQFATGGWDCL-----LKIWSADISKERG  240 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~-----i~iwd~~~~~~~~  240 (391)
                      ++.+..++.|+.+|.|.+.+     .....++.++.+... |..+....+.++|++.+.|+.     +++|+++......
T Consensus        32 ~s~~~~vvigt~~G~V~~Ln-----~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~  106 (933)
T KOG2114|consen   32 SSSTGSVVIGTADGRVVILN-----SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNN  106 (933)
T ss_pred             cCCCceEEEeeccccEEEec-----ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCC
Confidence            44677899999999998887     344555777777777 555544445578888877754     8999997633211


Q ss_pred             CCCCCCCCCccccccccccccCCCCCce--eeec-----CccCcccEEEec-cCCeEEEEECCCeEEEEecc---cC--c
Q psy2107         241 DPSENGDEGTTSKKRKKEYSSASSRTPL--ITLK-----GHKEAISAVQWT-AVDEIITSSWDHTLKIWDAE---LG--G  307 (391)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~---~~--~  307 (391)
                                             +..++  ..+.     ....++.+++.+ +-..++.|-.+|.|..+.-.   ..  +
T Consensus       107 -----------------------sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr  163 (933)
T KOG2114|consen  107 -----------------------SPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSR  163 (933)
T ss_pred             -----------------------CcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccc
Confidence                                   01111  1111     235677888888 44568888889999988532   11  1


Q ss_pred             eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      ......+..+|+.+++..++..++-...-..|.+|.+.. +. +....+..|...++|.++++..+.++++++  ..+.+
T Consensus       164 ~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~g-r~-p~~~~ld~~G~~lnCss~~~~t~qfIca~~--e~l~f  239 (933)
T KOG2114|consen  164 QDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSG-RT-PSLKVLDNNGISLNCSSFSDGTYQFICAGS--EFLYF  239 (933)
T ss_pred             eeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecC-CC-cceeeeccCCccceeeecCCCCccEEEecC--ceEEE
Confidence            222233456999999999888633333456799999874 33 344567788889999999984443444443  46677


Q ss_pred             Eec
Q psy2107         388 WDL  390 (391)
Q Consensus       388 wdl  390 (391)
                      ||.
T Consensus       240 Y~s  242 (933)
T KOG2114|consen  240 YDS  242 (933)
T ss_pred             EcC
Confidence            653

>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats

Probab=98.54  E-value=0.00012  Score=65.19  Aligned_cols=97  Identities=10%  Similarity=0.189  Sum_probs=71.7

Q ss_pred             CccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc--
Q psy2107         273 GHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG--  349 (391)
Q Consensus       273 ~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~--  349 (391)
                      .....|.+.+++| ...++.|+.||.|.+||...+..... +..-..+.++|+|+|.++++|+..|.+.+||+....-  
T Consensus       257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~  335 (545)
T PF11768_consen  257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKM  335 (545)
T ss_pred             ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEeecCccce
Confidence            4677899999995 45699999999999999877644333 4445678899999999999999999999999754320  


Q ss_pred             -----------ceEEEEeccccCcEEEEEECC
Q psy2107         350 -----------AIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       350 -----------~~~~~~~~~h~~~v~~~~~~~  370 (391)
                                 ..-...+..+......+.|.+
T Consensus       336 qLlsEd~~P~~~L~Ls~yf~~~~~L~~iqW~~  367 (545)
T PF11768_consen  336 QLLSEDATPKSTLQLSKYFRVSSSLVHIQWAP  367 (545)
T ss_pred             eeccccCCCccEEeeehhccCcchhheeEecc
Confidence                       011112223556678888885

>KOG2314|consensus

Probab=98.54  E-value=4.6e-05  Score=66.89  Aligned_cols=280  Identities=15%  Similarity=0.179  Sum_probs=147.2

Q ss_pred             eeEEeCCeEehhhHHH-HHHHcCCCccceEEEEEEeccCCCCCCcccCCCC---cEEEEEecCCEEEEEECCCeEEEEcC
Q psy2107          68 FDFLIAGELLRTSVTS-FLESKGISSENVIDVEYLESTPTPSPLDCILHDD---WVSAIDFHNDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~~~~l~t~~~dg~i~iwd~  143 (391)
                      .+|+|+.+.|.+-... -....+-.....+.+|++..........+..-.-   ++..-+++++++|.-.. .+|.||+.
T Consensus       255 idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEt  333 (698)
T KOG2314|consen  255 IDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYET  333 (698)
T ss_pred             eecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEec
Confidence            3888888776541111 1112222344678899887554443333322111   23333334667776666 57999987


Q ss_pred             CCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         144 RGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       144 ~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      ....+.... -.-..|....|   +|.+++||--...     .++.+-.+  .  ..+.+++..-|.-.=..|.|-.+|.
T Consensus       334 psf~lld~Kslki~gIr~Fsw---sP~~~llAYwtpe~~~~parvtL~ev--P--s~~~iRt~nlfnVsDckLhWQk~gd  406 (698)
T KOG2314|consen  334 PSFMLLDKKSLKISGIRDFSW---SPTSNLLAYWTPETNNIPARVTLMEV--P--SKREIRTKNLFNVSDCKLHWQKSGD  406 (698)
T ss_pred             CceeeecccccCCccccCccc---CCCcceEEEEcccccCCcceEEEEec--C--ccceeeeccceeeeccEEEeccCCc
Confidence            543332211 23356788889   4455555532211     11222221  1  1122222222222223455666777


Q ss_pred             EEEEEe----------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC
Q psy2107         218 QFATGG----------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD  287 (391)
Q Consensus       218 ~l~sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  287 (391)
                      +|..--          .-..+.|+.++...                            -++..+. -...|...+|-|.|
T Consensus       407 yLcvkvdR~tK~~~~g~f~n~eIfrireKd----------------------------Ipve~ve-lke~vi~FaWEP~g  457 (698)
T KOG2314|consen  407 YLCVKVDRHTKSKVKGQFSNLEIFRIREKD----------------------------IPVEVVE-LKESVIAFAWEPHG  457 (698)
T ss_pred             EEEEEEEeeccccccceEeeEEEEEeeccC----------------------------CCceeee-cchheeeeeeccCC
Confidence            665321          11234444443211                            1233222 35667788888655


Q ss_pred             e-EE--EE-ECCCeEEEEeccc-C---ceeEEEECCeeeEEEEECCCCCEEEEe---eCCCcEEEEcCCCCCcceEEE-E
Q psy2107         288 E-II--TS-SWDHTLKIWDAEL-G---GMKSEIVGNKSFFDVHYSPLSKLVITA---SADKQIRLYDPKVKEGAIVKS-T  355 (391)
Q Consensus       288 ~-l~--s~-~~dg~i~iwd~~~-~---~~~~~~~~~~~i~~~~~~p~~~~l~~g---~~dg~i~iwd~~~~~~~~~~~-~  355 (391)
                      . ++  +| ....++++|-+.+ .   .++..+.. ...+.+.|+|.|++++.+   |..|.+.++|+....   +.. .
T Consensus       458 dkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~---~k~~~  533 (698)
T KOG2314|consen  458 DKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-KFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYAD---LKDTA  533 (698)
T ss_pred             CeEEEEEccccccceeEEEeecCCCchhhhhhhcc-cccceEEEcCCCcEEEEEEecccccceEEEecchhh---hhhcc
Confidence            3 33  33 2346788998873 2   12222222 467789999999988776   457899999986422   111 1


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeC------CCcEEEEec
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASF------DNSVKLWDL  390 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~v~iwdl  390 (391)
                      ...|. ..+.+.|.| .+++++|++.      |.--+||++
T Consensus       534 ~~eh~-~at~veWDP-tGRYvvT~ss~wrhk~d~GYri~tf  572 (698)
T KOG2314|consen  534 SPEHF-AATEVEWDP-TGRYVVTSSSSWRHKVDNGYRIFTF  572 (698)
T ss_pred             Ccccc-ccccceECC-CCCEEEEeeehhhhccccceEEEEe
Confidence            22343 468899999 6678888875      344566654

>PRK04043 tolB translocation protein TolB; Provisional

Probab=98.52  E-value=0.00014  Score=65.32  Aligned_cols=190  Identities=7%  Similarity=0.017  Sum_probs=107.7

Q ss_pred             cEEEEEec--CCE-EEEEECC---CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEE-EEeCCCcEEEEeecCC
Q psy2107         118 WVSAIDFH--NDW-ILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTAMIWEWKVE  190 (391)
Q Consensus       118 ~V~~~~~~--~~~-l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~-s~~~dg~v~iwd~~~~  190 (391)
                      .+..-.|+  |+. ++..+.+   ..|.++|+.+.....+....+......|   +|+++.++ +.+.++.-.+|-++..
T Consensus       189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~---SPDG~~la~~~~~~g~~~Iy~~dl~  265 (419)
T PRK04043        189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDV---SKDGSKLLLTMAPKGQPDIYLYDTN  265 (419)
T ss_pred             CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEE---CCCCCEEEEEEccCCCcEEEEEECC
Confidence            55667777  553 5544443   4688889866555555555666777889   66776554 4444554445543343


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      ....+.+   ..+........|+|+|+.|+-.+. .+  .|.+.|+.+++..                            
T Consensus       266 ~g~~~~L---T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~----------------------------  314 (419)
T PRK04043        266 TKTLTQI---TNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE----------------------------  314 (419)
T ss_pred             CCcEEEc---ccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE----------------------------
Confidence            4433333   222323345679999988776653 33  5667777653321                            


Q ss_pred             eeeecCccCcccEEEeccCCe-EEEEECC---------CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-
Q psy2107         268 LITLKGHKEAISAVQWTAVDE-IITSSWD---------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-  336 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-  336 (391)
                      ..+..+.  .  ...|+|++. ++..+..         ..|.+.|+.++... .+..........|+|||+.|+..+.+ 
T Consensus       315 rlt~~g~--~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~~~~~p~~SPDG~~I~f~~~~~  389 (419)
T PRK04043        315 QVVFHGK--N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANGVNQFPRFSSDGGSIMFIKYLG  389 (419)
T ss_pred             eCccCCC--c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCCCcCCeEECCCCCEEEEEEccC
Confidence            0011111  1  237886665 4444332         36788888877643 33333333358899999987765543 


Q ss_pred             --CcEEEEcCCC
Q psy2107         337 --KQIRLYDPKV  346 (391)
Q Consensus       337 --g~i~iwd~~~  346 (391)
                        ..+.+.++..
T Consensus       390 ~~~~L~~~~l~g  401 (419)
T PRK04043        390 NQSALGIIRLNY  401 (419)
T ss_pred             CcEEEEEEecCC
Confidence              2366666644

>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A

Probab=98.45  E-value=7.1e-05  Score=62.05  Aligned_cols=182  Identities=12%  Similarity=0.043  Sum_probs=110.7

Q ss_pred             cCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ec
Q psy2107         125 HNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RG  202 (391)
Q Consensus       125 ~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~  202 (391)
                      .++.+++++.++.|..||. +++.+..... .+.+.....    ..+..++.++.++.+..+|..  +  .+.+... ..
T Consensus        35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~----~~~~~v~v~~~~~~l~~~d~~--t--G~~~W~~~~~  105 (238)
T PF13360_consen   35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAPV----VDGGRVYVGTSDGSLYALDAK--T--GKVLWSIYLT  105 (238)
T ss_dssp             ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGEE----EETTEEEEEETTSEEEEEETT--T--SCEEEEEEE-
T ss_pred             eCCEEEEEcCCCEEEEEECCCCCEEEEeec-cccccceee----ecccccccccceeeeEecccC--C--cceeeeeccc
Confidence            6788888899999999998 7777666554 222222111    133456666788888888843  2  2334442 21


Q ss_pred             CC---CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC---
Q psy2107         203 HE---RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE---  276 (391)
Q Consensus       203 ~~---~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  276 (391)
                      ..   ...........+..++.+..++.|..+|.++++..                             ........   
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~-----------------------------w~~~~~~~~~~  156 (238)
T PF13360_consen  106 SSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLL-----------------------------WKYPVGEPRGS  156 (238)
T ss_dssp             SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEE-----------------------------EEEESSTT-SS
T ss_pred             cccccccccccCceEecCEEEEEeccCcEEEEecCCCcEE-----------------------------EEeecCCCCCC
Confidence            11   11122223333778888888999999999886642                             12211110   


Q ss_pred             -------cc-cEEEeccCCeEEEEECCCe-EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         277 -------AI-SAVQWTAVDEIITSSWDHT-LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       277 -------~v-~~~~~~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                             .+ ..+.+. ++.++.++.++. +.+ |+.+++.+.... ...+..+ ....+..|+.++.++.|..||++++
T Consensus       157 ~~~~~~~~~~~~~~~~-~~~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG  232 (238)
T PF13360_consen  157 SPISSFSDINGSPVIS-DGRVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYVTSSDGRLYALDLKTG  232 (238)
T ss_dssp             --EEEETTEEEEEECC-TTEEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEEEETTTEEEEEETTTT
T ss_pred             cceeeecccccceEEE-CCEEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEEEeCCCEEEEEECCCC
Confidence                   11 222223 458888888885 555 999999765433 3333331 3456778887778999999999887


Q ss_pred             C
Q psy2107         348 E  348 (391)
Q Consensus       348 ~  348 (391)
                      +
T Consensus       233 ~  233 (238)
T PF13360_consen  233 K  233 (238)
T ss_dssp             E
T ss_pred             C
Confidence            5

...

>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species

Probab=98.45  E-value=0.00038  Score=58.01  Aligned_cols=191  Identities=14%  Similarity=0.123  Sum_probs=115.9

Q ss_pred             EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                      ++.|.+  .++.++++-...+.|..|+..  ...   ...+..  .....+++. +++. |+.+... .+.++|..+++.
T Consensus         4 gp~~d~--~~g~l~~~D~~~~~i~~~~~~--~~~---~~~~~~--~~~~G~~~~~~~g~-l~v~~~~-~~~~~d~~~g~~   72 (246)
T PF08450_consen    4 GPVWDP--RDGRLYWVDIPGGRIYRVDPD--TGE---VEVIDL--PGPNGMAFDRPDGR-LYVADSG-GIAVVDPDTGKV   72 (246)
T ss_dssp             EEEEET--TTTEEEEEETTTTEEEEEETT--TTE---EEEEES--SSEEEEEEECTTSE-EEEEETT-CEEEEETTTTEE
T ss_pred             ceEEEC--CCCEEEEEEcCCCEEEEEECC--CCe---EEEEec--CCCceEEEEccCCE-EEEEEcC-ceEEEecCCCcE
Confidence            466732  267788887788999998843  322   122222  226777887 6654 5555554 455668876432


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeec--C-ccCcccEEEeccCCeEEEEECC---------CeEEEEecccC
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--G-HKEAISAVQWTAVDEIITSSWD---------HTLKIWDAELG  306 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~v~~~~~~~~~~l~s~~~d---------g~i~iwd~~~~  306 (391)
                                                 ..+....  . .....+.+++.+++.++.+...         |.|..++.. +
T Consensus        73 ---------------------------~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~  124 (246)
T PF08450_consen   73 ---------------------------TVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-G  124 (246)
T ss_dssp             ---------------------------EEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-S
T ss_pred             ---------------------------EEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-C
Confidence                                       1222221  1 3455678899988876666432         457777766 5


Q ss_pred             ceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCc----ceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         307 GMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEG----AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       307 ~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      +.......-...+.++|+|+++.|+ +-+..+.|..|++.....    ......+..-.+..-.+++.. ++++.++.-.
T Consensus       125 ~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~-~G~l~va~~~  203 (246)
T PF08450_consen  125 KVTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDS-DGNLWVADWG  203 (246)
T ss_dssp             EEEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBT-TS-EEEEEET
T ss_pred             eEEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcC-CCCEEEEEcC
Confidence            5444444434568899999998765 556778899999864332    112222333233478899998 6677777777


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      .+.|.++|-
T Consensus       204 ~~~I~~~~p  212 (246)
T PF08450_consen  204 GGRIVVFDP  212 (246)
T ss_dssp             TTEEEEEET
T ss_pred             CCEEEEECC
Confidence            888988874

These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....

>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]

Probab=98.44  E-value=0.00013  Score=63.47  Aligned_cols=234  Identities=15%  Similarity=0.188  Sum_probs=145.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc----------
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT----------  181 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~----------  181 (391)
                      -.-++..++++  |.+|++.... .|.+|+- ....+..+. | ..|..+.|   +|.+.+|.+-+..+.          
T Consensus        31 ~~~p~~~~~~SP~G~~l~~~~~~-~V~~~~g~~~~~l~~~~-~-~~V~~~~f---SP~~kYL~tw~~~pi~~pe~e~sp~  104 (561)
T COG5354          31 ENWPVAYVSESPLGTYLFSEHAA-GVECWGGPSKAKLVRFR-H-PDVKYLDF---SPNEKYLVTWSREPIIEPEIEISPF  104 (561)
T ss_pred             cCcchhheeecCcchheehhhcc-ceEEccccchhheeeee-c-CCceeccc---CcccceeeeeccCCccChhhccCCc
Confidence            34467788888  5677666554 4888886 333444443 3 45778888   778889988765443          


Q ss_pred             -----EEEEeecCCCCceeEEEEEecCCCC--eE-EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107         182 -----AMIWEWKVESNSIECIHVCRGHERG--LE-TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSK  253 (391)
Q Consensus       182 -----v~iwd~~~~~~~~~~~~~~~~~~~~--v~-~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  253 (391)
                           +.+||+.    ....+..+.....+  .. -+.|+-+.++.|--. ...++++++ +....              
T Consensus       105 ~~~n~~~vwd~~----sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv-~~sl~i~e~-t~n~~--------------  164 (561)
T COG5354         105 TSKNNVFVWDIA----SGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVV-GSSLYIHEI-TDNIE--------------  164 (561)
T ss_pred             cccCceeEEecc----CceeEeeccccCCcccccceeeeeecchhhhhhc-cCeEEEEec-CCccc--------------
Confidence                 8899954    34556666655444  34 677888887766442 346899997 32221              


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCC---eEEE-----EECCCeEEEEecccCceeEEEECCe-eeEEEEEC
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD---EIIT-----SSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYS  324 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s-----~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~  324 (391)
                                 ..+...+.  ...|....|+|.+   .|+.     ...++.+++|.+..+..+.+..... .-..+.|.
T Consensus       165 -----------~~p~~~lr--~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~  231 (561)
T COG5354         165 -----------EHPFKNLR--PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQ  231 (561)
T ss_pred             -----------cCchhhcc--ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEe
Confidence                       11222222  2446666676542   1332     3568899999998777665544332 33568889


Q ss_pred             CCCCEEEEee-----------CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCE-EEEeeCCCcEEEEecC
Q psy2107         325 PLSKLVITAS-----------ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL-FVSASFDNSVKLWDLR  391 (391)
Q Consensus       325 p~~~~l~~g~-----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-l~s~~~dg~v~iwdlr  391 (391)
                      +.|++|++--           .+..++|++++...   +. ....-.++|...+|.|.+.++ +++|-.+-.+.++|+|
T Consensus       232 ~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~---i~-V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr  306 (561)
T COG5354         232 VLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERS---IP-VEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLR  306 (561)
T ss_pred             cCCceEEEEEEEeeecccceeccceEEEEeecccc---cc-eeccccccceeeeecccCCceeEEecccccceeecccc
Confidence            9898776431           13467888876433   22 222567899999999965553 3334577788888875

>KOG4649|consensus

Probab=98.44  E-value=0.00036  Score=55.71  Aligned_cols=100  Identities=14%  Similarity=0.110  Sum_probs=63.1

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      |++++.|++.|.+++.+. ++.+...+... +.|.+-+-.  ++++.++..|+.|++....|..    ...++...+...
T Consensus        63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~--d~~~glIycgshd~~~yalD~~----~~~cVykskcgG  135 (354)
T KOG4649|consen   63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQC--DFDGGLIYCGSHDGNFYALDPK----TYGCVYKSKCGG  135 (354)
T ss_pred             CCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEE--cCCCceEEEecCCCcEEEeccc----ccceEEecccCC
Confidence            889999999999999998 55566655432 222221111  5588899999999999999865    445566555444


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                      +...+-+..|....|..+...|.+.--.
T Consensus       136 ~~f~sP~i~~g~~sly~a~t~G~vlavt  163 (354)
T KOG4649|consen  136 GTFVSPVIAPGDGSLYAAITAGAVLAVT  163 (354)
T ss_pred             ceeccceecCCCceEEEEeccceEEEEc
Confidence            4444455555333344444445544333

>KOG2314|consensus

Probab=98.43  E-value=7.5e-05  Score=65.64  Aligned_cols=236  Identities=15%  Similarity=0.202  Sum_probs=132.5

Q ss_pred             CCCCcEEEEEec--CCEEEEEECC-----------CeEEEEcC-CCceEEeccC--CCCCee-EEEEEecCCCCeEEEEE
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYD-----------HSVHIWTR-RGEHKLNIPG--HGGPVK-GVAWLYNDGKDAAFISV  176 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~d-----------g~i~iwd~-~~~~~~~~~~--~~~~v~-~l~~~~~~~~~~~l~s~  176 (391)
                      .|. .|.-+.|+  .++|+|-+..           ..++|||+ +|.....+..  ....++ -..|   +-+++++|--
T Consensus       248 ~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frW---S~DdKy~Arm  323 (698)
T KOG2314|consen  248 YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRW---SHDDKYFARM  323 (698)
T ss_pred             cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEe---ccCCceeEEe
Confidence            354 46667787  4588886542           47999999 6655555543  222232 3567   6677777765


Q ss_pred             eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         177 STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       177 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      .. .+|.||+.  .  ...++..-.-.-..|....|+|.+++||-=...     ..+.+-.+.+                
T Consensus       324 ~~-~sisIyEt--p--sf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs----------------  382 (698)
T KOG2314|consen  324 TG-NSISIYET--P--SFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPS----------------  382 (698)
T ss_pred             cc-ceEEEEec--C--ceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCc----------------
Confidence            55 57899982  2  233332222235678899999997766532211     1122222221                


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEE----------EECCCeEEEEecccCc-eeEEEECCeeeE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIIT----------SSWDHTLKIWDAELGG-MKSEIVGNKSFF  319 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s----------~~~dg~i~iwd~~~~~-~~~~~~~~~~i~  319 (391)
                                   ...+.+-.-+.-.=..+.|-.++ +|+.          .+.-..+.|+.++... ++........+.
T Consensus       383 -------------~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke~vi  449 (698)
T KOG2314|consen  383 -------------KREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKESVI  449 (698)
T ss_pred             -------------cceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecchhee
Confidence                         11122211122111223333222 2221          1222345566665433 344555667899


Q ss_pred             EEEECCCCCEEEEeeC---CCcEEEEcCCC-CCcceEEEEeccccCcEEEEEECCCCCCEEEEee---CCCcEEEEec
Q psy2107         320 DVHYSPLSKLVITASA---DKQIRLYDPKV-KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDL  390 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~---dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwdl  390 (391)
                      ..+|-|.|+.+++-+.   ..++.+|.+++ ...+.++..+..  ...+.+.|+| .+++++.++   ..|.+.++|+
T Consensus       450 ~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsP-kG~fvvva~l~s~~g~l~F~D~  524 (698)
T KOG2314|consen  450 AFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSP-KGRFVVVAALVSRRGDLEFYDT  524 (698)
T ss_pred             eeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcC-CCcEEEEEEecccccceEEEec
Confidence            9999999997766543   35788998873 333344445543  5578999999 555555543   4678888875

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.42  E-value=0.00017  Score=64.74  Aligned_cols=247  Identities=9%  Similarity=-0.026  Sum_probs=131.0

Q ss_pred             EEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeE-EEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE
Q psy2107         122 IDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKG-VAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV  199 (391)
Q Consensus       122 ~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~-l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  199 (391)
                      +...++.++.++.+|.+.-+|. +++.+.+..... .+.+ ...     .+..++.+..+|.+..+|..    +.+.+..
T Consensus       116 ~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~-~~~ssP~v-----~~~~v~v~~~~g~l~ald~~----tG~~~W~  185 (394)
T PRK11138        116 VTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAG-EALSRPVV-----SDGLVLVHTSNGMLQALNES----DGAVKWT  185 (394)
T ss_pred             cEEECCEEEEEcCCCEEEEEECCCCCCcccccCCC-ceecCCEE-----ECCEEEEECCCCEEEEEEcc----CCCEeee
Confidence            3455778888999999999998 666666554332 2221 111     23356667788988888854    2233333


Q ss_pred             EecCCCCe-----EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC------------CccccccccccccC
Q psy2107         200 CRGHERGL-----ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE------------GTTSKKRKKEYSSA  262 (391)
Q Consensus       200 ~~~~~~~v-----~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~  262 (391)
                      .......+     .+...  .+..++.++.+|.+..+|..+++..-........            ..........+...
T Consensus       186 ~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~  263 (394)
T PRK11138        186 VNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALA  263 (394)
T ss_pred             ecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEE
Confidence            33211000     01111  1235677788899998998887654322110000            00000000011000


Q ss_pred             CCCCceeeecCccC---------cccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEE
Q psy2107         263 SSRTPLITLKGHKE---------AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVI  331 (391)
Q Consensus       263 ~~~~~~~~~~~~~~---------~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~  331 (391)
                      . ...+..+....+         ....+.. .++.++.++.+|.+..+|..+++.+.....  .....+..+  .+.+|+
T Consensus       264 ~-~g~l~ald~~tG~~~W~~~~~~~~~~~~-~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~  339 (394)
T PRK11138        264 Y-NGNLVALDLRSGQIVWKREYGSVNDFAV-DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLV  339 (394)
T ss_pred             c-CCeEEEEECCCCCEEEeecCCCccCcEE-ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEE
Confidence            0 001111111111         0111111 346788888999999999999987654432  111111122  256778


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .++.+|.++++|..+++   .+....-....+.+ ..+.  ++ .|+.++.||.|+.+++
T Consensus       340 v~~~~G~l~~ld~~tG~---~~~~~~~~~~~~~s~P~~~--~~-~l~v~t~~G~l~~~~~  393 (394)
T PRK11138        340 VGDSEGYLHWINREDGR---FVAQQKVDSSGFLSEPVVA--DD-KLLIQARDGTVYAITR  393 (394)
T ss_pred             EEeCCCEEEEEECCCCC---EEEEEEcCCCcceeCCEEE--CC-EEEEEeCCceEEEEeC
Confidence            88999999999988866   44444322222322 2222  44 4777899999998875

>KOG1008|consensus

Probab=98.41  E-value=1.8e-07  Score=82.86  Aligned_cols=198  Identities=17%  Similarity=0.219  Sum_probs=126.4

Q ss_pred             CcEEEEEec---C-CEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----CCCcEEEE
Q psy2107         117 DWVSAIDFH---N-DWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----TDQTAMIW  185 (391)
Q Consensus       117 ~~V~~~~~~---~-~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----~dg~v~iw  185 (391)
                      ..+.|++..   . ..+++|..+|.|-+-....   ..-...++|..++++++|.+.  |.+.||+|-    .|..+.||
T Consensus        57 qy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneL--Dtn~LAagldkhrnds~~~Iw  134 (783)
T KOG1008|consen   57 QYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNEL--DTNHLAAGLDKHRNDSSLKIW  134 (783)
T ss_pred             CCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccc--cHHHHHhhhhhhcccCCccce
Confidence            356677765   2 3889999999999987732   223356788999999999654  566777774    36789999


Q ss_pred             eecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         186 EWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      |+...-........+.+ -.....+++|-.+.+++++|...+.++++|++....                          
T Consensus       135 di~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~--------------------------  188 (783)
T KOG1008|consen  135 DINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLD--------------------------  188 (783)
T ss_pred             ecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhhhhhhhh--------------------------
Confidence            97633111111122222 334566889998889999999999999999974211                          


Q ss_pred             CCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEec-ccC-ceeEEEEC-----CeeeEEEEECCCCC-EEEEee-
Q psy2107         265 RTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDA-ELG-GMKSEIVG-----NKSFFDVHYSPLSK-LVITAS-  334 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~-~~~-~~~~~~~~-----~~~i~~~~~~p~~~-~l~~g~-  334 (391)
                          ....-.+..+..+...| ....++...||.|.+||. ++- .++..+..     ...+..++|+|... .+++.+ 
T Consensus       189 ----~~~svnTk~vqG~tVdp~~~nY~cs~~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~R  264 (783)
T KOG1008|consen  189 ----SVSSVNTKYVQGITVDPFSPNYFCSNSDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSR  264 (783)
T ss_pred             ----hhhhhhhhhcccceecCCCCCceeccccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhcc
Confidence                11111234455566665 223444555999999993 321 22222222     23588999999743 444444 


Q ss_pred             CCCcEEEEcCCC
Q psy2107         335 ADKQIRLYDPKV  346 (391)
Q Consensus       335 ~dg~i~iwd~~~  346 (391)
                      ..++|+++|+..
T Consensus       265 dS~tIrlydi~~  276 (783)
T KOG1008|consen  265 DSITIRLYDICV  276 (783)
T ss_pred             CcceEEEecccc
Confidence            457899999864

>KOG3621|consensus

Probab=98.38  E-value=6e-06  Score=74.35  Aligned_cols=114  Identities=11%  Similarity=0.140  Sum_probs=84.9

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccC--CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPG--HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      ..+|++..+++++.|+.-|.+++|+-.+.....++.  ..+.+..+..   +++..++|+|+..|.|.++.+.. .....
T Consensus        37 ~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~v---s~~e~lvAagt~~g~V~v~ql~~-~~p~~  112 (726)
T KOG3621|consen   37 KLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSV---SSVEYLVAAGTASGRVSVFQLNK-ELPRD  112 (726)
T ss_pred             EEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEe---cchhHhhhhhcCCceEEeehhhc-cCCCc
Confidence            456777789999999999999999986655554442  3344444555   56777899999999999998654 22222


Q ss_pred             EEEE--E-ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         196 CIHV--C-RGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       196 ~~~~--~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      ....  + ..|...|++++|++++..+++|...|.|.+-.++.
T Consensus       113 ~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s  155 (726)
T KOG3621|consen  113 LDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS  155 (726)
T ss_pred             ceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence            2111  1 23678999999999999999999999999988865

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=98.33  E-value=0.002  Score=57.81  Aligned_cols=203  Identities=13%  Similarity=0.094  Sum_probs=105.1

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee---EEEEEecCCCCeEEEEEc
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE---CIHVCRGHERGLETVTVS  213 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---~~~~~~~~~~~v~~l~~~  213 (391)
                      .|+||+..|..+.++.-..+.+.++.|   +.+ ..|+....||.++++|+.-.. ...   .+....-....+....+.
T Consensus        62 ~I~iys~sG~ll~~i~w~~~~iv~~~w---t~~-e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~  136 (410)
T PF04841_consen   62 SIQIYSSSGKLLSSIPWDSGRIVGMGW---TDD-EELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFY  136 (410)
T ss_pred             EEEEECCCCCEeEEEEECCCCEEEEEE---CCC-CeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccC
Confidence            599999999988876644589999999   543 456677899999999963111 000   011111111122223344


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEE
Q psy2107         214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITS  292 (391)
Q Consensus       214 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~  292 (391)
                      .+|-.++  ..++.+.+..--........ ...                 ..........+........++ .....+..
T Consensus       137 ~~GivvL--t~~~~~~~v~n~~~~~~~~~-~~~-----------------~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~  196 (410)
T PF04841_consen  137 KNGIVVL--TGNNRFYVVNNIDEPVKLRR-LPE-----------------IPGLWTKFHWWPSWTVIPLLSSDRVVEILL  196 (410)
T ss_pred             CCCEEEE--CCCCeEEEEeCccccchhhc-ccc-----------------CCCcccccccccccccceEeecCcceEEEE
Confidence            4553333  34455444322111100000 000                 000000011111110012233 23334555


Q ss_pred             ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECC
Q psy2107         293 SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSP  370 (391)
Q Consensus       293 ~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~  370 (391)
                      ..++.+.+.+-...+.   +...+++..+++||+|+++|.-..+|.+.+.+....+   ....+.. -......|.|+-
T Consensus       197 ~~g~~i~~i~~~~~~~---i~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~---~~~e~~~~~~~~p~~~~WCG  269 (410)
T PF04841_consen  197 ANGETIYIIDENSFKQ---IDSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSE---KLCEFDTDSKSPPKQMAWCG  269 (410)
T ss_pred             ecCCEEEEEEcccccc---ccCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccc---eeEEeecCcCCCCcEEEEEC
Confidence            5566666444332211   3345689999999999999999999999998765433   2233322 244667888876

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>KOG1645|consensus

Probab=98.33  E-value=8.1e-05  Score=62.83  Aligned_cols=79  Identities=4%  Similarity=0.101  Sum_probs=62.6

Q ss_pred             cccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         111 DCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .+.+|...|..++|++   .++..++.+..|+|.|+....+. .+..+ ..+++++|.-+  +.+++.+|-.+|.|.+||
T Consensus       188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDld--e~h~IYaGl~nG~VlvyD  264 (463)
T KOG1645|consen  188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLD--ERHVIYAGLQNGMVLVYD  264 (463)
T ss_pred             cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccC--CcceeEEeccCceEEEEE
Confidence            5566888999999982   37899999999999999655444 55555 88999999533  456889999999999999


Q ss_pred             ecCCCC
Q psy2107         187 WKVESN  192 (391)
Q Consensus       187 ~~~~~~  192 (391)
                      ++..++
T Consensus       265 ~R~~~~  270 (463)
T KOG1645|consen  265 MRQPEG  270 (463)
T ss_pred             ccCCCc
Confidence            875543

>PRK11138 outer membrane biogenesis protein BamB; Provisional

Probab=98.29  E-value=0.00071  Score=60.73  Aligned_cols=248  Identities=8%  Similarity=-0.037  Sum_probs=127.9

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCCCC----------Ce-eEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGG----------PV-KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~----------~v-~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      .+.++.+++++.+|.+.-+|. +++.+.+..-...          .+ ..+..     .+..++.++.+|.+..+|....
T Consensus        66 vv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v-----~~~~v~v~~~~g~l~ald~~tG  140 (394)
T PRK11138         66 AVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV-----AGGKVYIGSEKGQVYALNAEDG  140 (394)
T ss_pred             EEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE-----ECCEEEEEcCCCEEEEEECCCC
Confidence            345778888888999999998 5666665432110          00 01111     2446777888999999985422


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC------Cccccccccccc----
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE------GTTSKKRKKEYS----  260 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~----  260 (391)
                          +.+...........+...  .+..++.++.+|.+..+|.++++..-........      ..........+.    
T Consensus       141 ----~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~  214 (394)
T PRK11138        141 ----EVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDN  214 (394)
T ss_pred             ----CCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCC
Confidence                223332221111111111  2345777888899999999888765433211100      000000000000    


Q ss_pred             ------cCCCCCceeeecCcc----Cc---ccEEEec---cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEEC
Q psy2107         261 ------SASSRTPLITLKGHK----EA---ISAVQWT---AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS  324 (391)
Q Consensus       261 ------~~~~~~~~~~~~~~~----~~---v~~~~~~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~  324 (391)
                            +..+.+.+.......    ..   ...+..+   .++.++.++.+|.+..+|..+|+.+........ ..+.. 
T Consensus       215 g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~~-  292 (394)
T PRK11138        215 GRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGSV-NDFAV-  292 (394)
T ss_pred             CEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCCc-cCcEE-
Confidence                  111111111110000    00   0000011   256788888999999999999988766543221 11222 


Q ss_pred             CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       325 p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .+..++.++.+|.+..+|..+++   .+.....- .....+....  ++ .++.++.||.+.+.|.
T Consensus       293 -~~~~vy~~~~~g~l~ald~~tG~---~~W~~~~~~~~~~~sp~v~--~g-~l~v~~~~G~l~~ld~  352 (394)
T PRK11138        293 -DGGRIYLVDQNDRVYALDTRGGV---ELWSQSDLLHRLLTAPVLY--NG-YLVVGDSEGYLHWINR  352 (394)
T ss_pred             -ECCEEEEEcCCCeEEEEECCCCc---EEEcccccCCCcccCCEEE--CC-EEEEEeCCCEEEEEEC
Confidence             35677777889999999987765   22221110 1111222222  33 4667788888887764

>KOG3617|consensus

Probab=98.29  E-value=6.6e-05  Score=69.39  Aligned_cols=98  Identities=15%  Similarity=0.206  Sum_probs=73.2

Q ss_pred             EEEEEE----CCCeEEEEcCCCceEE--eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         128 WILTGC----YDHSVHIWTRRGEHKL--NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       128 ~l~t~~----~dg~i~iwd~~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      ++++++    ..|+|.||--+++...  +.+-|   +++++|   +|..-.|+.|-.-|.+.+|.-.    ..+.-....
T Consensus        29 lfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~h---atSLCW---Hpe~~vLa~gwe~g~~~v~~~~----~~e~htv~~   98 (1416)
T KOG3617|consen   29 LFAVASFSPERGGSVTIFADTGEPQRDVTYPVH---ATSLCW---HPEEFVLAQGWEMGVSDVQKTN----TTETHTVVE   98 (1416)
T ss_pred             eeEEEEecCCCCceEEEEecCCCCCccccccee---hhhhcc---ChHHHHHhhccccceeEEEecC----Cceeeeecc
Confidence            555554    3488999866555332  33333   567999   5556688999999999999832    334444455


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .|..+|..+.|+++|..++++..-|.+.+|..+.
T Consensus        99 th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~  132 (1416)
T KOG3617|consen   99 THPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDV  132 (1416)
T ss_pred             CCCCCceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence            7999999999999999999999999999999874

>KOG2066|consensus

Probab=98.20  E-value=4.5e-05  Score=69.92  Aligned_cols=143  Identities=16%  Similarity=0.140  Sum_probs=104.7

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW  283 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  283 (391)
                      ...++|++++  +++|+-|+.+|.|++.+...                              .+ .+...|+..     -
T Consensus        39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~~------------------------------~~-~~~~~~s~~-----~   80 (846)
T KOG2066|consen   39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQG------------------------------NP-KTNFDHSSS-----I   80 (846)
T ss_pred             hhHHHHHHhh--cceeeeccccceEEEEecCC------------------------------cc-ccccccccc-----c
Confidence            3456677765  56899999999999999853                              12 233334333     1


Q ss_pred             ccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCC-----CCEEEEeeCCCcEEEEcCCCCCcceEEEEecc
Q psy2107         284 TAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL-----SKLVITASADKQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       284 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~-----~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~  358 (391)
                      ..+.++++|+.||+|.|-.+-+.+....+..+.++.+++++|+     .+.+++|+.-| +.++.-+-......+ .+..
T Consensus        81 ~~Gey~asCS~DGkv~I~sl~~~~~~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~  158 (846)
T KOG2066|consen   81 LEGEYVASCSDDGKVVIGSLFTDDEITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSE  158 (846)
T ss_pred             cCCceEEEecCCCcEEEeeccCCccceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeec
Confidence            2567899999999999999999999999999999999999998     56889998888 777764322211121 4556


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      -.++|.++.|.   +.++|=++++ -|+|||+
T Consensus       159 ~eG~I~~i~W~---g~lIAWand~-Gv~vyd~  186 (846)
T KOG2066|consen  159 GEGPIHSIKWR---GNLIAWANDD-GVKVYDT  186 (846)
T ss_pred             CccceEEEEec---CcEEEEecCC-CcEEEec
Confidence            67899999994   4666666654 5788885

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.14  E-value=0.0006  Score=47.36  Aligned_cols=69  Identities=12%  Similarity=0.137  Sum_probs=52.6

Q ss_pred             eeEEEEEecCCCC-eEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         158 VKGVAWLYNDGKD-AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       158 v~~l~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      |+++++...+.++ +.|++|+.|..||+|+      ....+..+.. ...|++++-... ..|+.|-.+|+|-+|+-.
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~------~~e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~   71 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFK------GDEIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDRS   71 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEe------CCcEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeCc
Confidence            6778887755543 5899999999999998      2245555553 567888887776 469999999999999863

>KOG1645|consensus

Probab=98.13  E-value=7e-06  Score=68.99  Aligned_cols=87  Identities=15%  Similarity=0.238  Sum_probs=74.3

Q ss_pred             CCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCC-CEEEEeeCCCcEEE
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS-KLVITASADKQIRL  341 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~-~~l~~g~~dg~i~i  341 (391)
                      .+....+.++...|..++|+|.+  .+..++.+..|+|.|+++......+..+..+++++|.-+. ++|.+|-.+|.|.|
T Consensus       183 fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~~~~wSC~wDlde~h~IYaGl~nG~Vlv  262 (463)
T KOG1645|consen  183 FKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAYNQIWSCCWDLDERHVIYAGLQNGMVLV  262 (463)
T ss_pred             cchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheeccCCceeeeeccCCcceeEEeccCceEEE
Confidence            33455677889999999999654  5888999999999999999999999999999999998874 57888889999999


Q ss_pred             EcCCCCCcce
Q psy2107         342 YDPKVKEGAI  351 (391)
Q Consensus       342 wd~~~~~~~~  351 (391)
                      ||++..+++.
T Consensus       263 yD~R~~~~~~  272 (463)
T KOG1645|consen  263 YDMRQPEGPL  272 (463)
T ss_pred             EEccCCCchH
Confidence            9999866543

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=98.10  E-value=0.00019  Score=67.93  Aligned_cols=147  Identities=12%  Similarity=0.092  Sum_probs=91.6

Q ss_pred             CCeEEEEE-eCCCcEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcC-----CCCEEEEEeCCCcEEEEECCCCCCCCC
Q psy2107         169 KDAAFISV-STDQTAMIWEWKVESNSIECIHVCRGHERG-LETVTVSE-----SRQQFATGGWDCLLKIWSADISKERGD  241 (391)
Q Consensus       169 ~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~-----~~~~l~sg~~dg~i~iwd~~~~~~~~~  241 (391)
                      +.++|+.- .....|+-.|++    .++.+..+..|... |..++-..     ....-+.|-.+..+..||.+-..... 
T Consensus       492 d~~mil~~~~~~~~ly~mDLe----~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~-  566 (794)
T PF08553_consen  492 DRNMILLDPNNPNKLYKMDLE----RGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKL-  566 (794)
T ss_pred             ccceEeecCCCCCceEEEecC----CCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCce-
Confidence            44444443 334556665644    44666777766543 55544321     12345677788899999998522100 


Q ss_pred             CCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-CeeeEE
Q psy2107         242 PSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-NKSFFD  320 (391)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~i~~  320 (391)
                                       .     ......+ .......|++-..+|+|++|+.+|.||+||--..+....+.+ ..+|..
T Consensus       567 -----------------v-----~~~~k~Y-~~~~~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~  623 (794)
T PF08553_consen  567 -----------------V-----DSQSKQY-SSKNNFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIG  623 (794)
T ss_pred             -----------------e-----ecccccc-ccCCCceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeE
Confidence                             0     0000111 234557788888999999999999999999432222233333 459999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         321 VHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      +..+.||++|++.+ +..+.+++.
T Consensus       624 iDvt~DGkwilaTc-~tyLlLi~t  646 (794)
T PF08553_consen  624 IDVTADGKWILATC-KTYLLLIDT  646 (794)
T ss_pred             EEecCCCcEEEEee-cceEEEEEE
Confidence            99999999988765 667778775

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region

Probab=98.08  E-value=0.00046  Score=47.92  Aligned_cols=100  Identities=7%  Similarity=0.140  Sum_probs=70.5

Q ss_pred             eEEEEEcC---C-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         207 LETVTVSE---S-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       207 v~~l~~~~---~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      |++|++..   + .+.|++|+.|..|++|+-+.                               .+..+. -...|++++
T Consensus         2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e-------------------------------~~~Ei~-e~~~v~~L~   49 (111)
T PF14783_consen    2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE-------------------------------IVAEIT-ETDKVTSLC   49 (111)
T ss_pred             eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc-------------------------------EEEEEe-cccceEEEE
Confidence            55666644   2 26799999999999998753                               444454 356788888


Q ss_pred             eccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECC-C--C-CEEEEeeCCCcEE
Q psy2107         283 WTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP-L--S-KLVITASADKQIR  340 (391)
Q Consensus       283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p-~--~-~~l~~g~~dg~i~  340 (391)
                      -...+.++.+..+|+|-+|+-  ...+...+....+.++++.. +  | .-|++|-.+|.|-
T Consensus        50 ~~~~~~F~Y~l~NGTVGvY~~--~~RlWRiKSK~~~~~~~~~D~~gdG~~eLI~GwsnGkve  109 (111)
T PF14783_consen   50 SLGGGRFAYALANGTVGVYDR--SQRLWRIKSKNQVTSMAFYDINGDGVPELIVGWSNGKVE  109 (111)
T ss_pred             EcCCCEEEEEecCCEEEEEeC--cceeeeeccCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence            887789999999999999975  33444555555566655543 2  2 2688888888764

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=98.05  E-value=0.0049  Score=54.62  Aligned_cols=205  Identities=8%  Similarity=0.082  Sum_probs=108.0

Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC---------------------------------------ceeEE
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN---------------------------------------SIECI  197 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~---------------------------------------~~~~~  197 (391)
                      .|+.+.|   .++..-|+.|...|.|.+|.+.....                                       ...+.
T Consensus         3 ~v~~vs~---a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~   79 (395)
T PF08596_consen    3 SVTHVSF---APETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPL   79 (395)
T ss_dssp             -EEEEEE---ETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEE
T ss_pred             eEEEEEe---cCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCch
Confidence            4778888   44556688899999999987643211                                       11223


Q ss_pred             EEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc
Q psy2107         198 HVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA  277 (391)
Q Consensus       198 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (391)
                      ..+....++|++++.+.-| +++.|..+|.+.|.|++....+....                     ......-......
T Consensus        80 ~l~~~~~g~vtal~~S~iG-Fvaigy~~G~l~viD~RGPavI~~~~---------------------i~~~~~~~~~~~~  137 (395)
T PF08596_consen   80 TLLDAKQGPVTALKNSDIG-FVAIGYESGSLVVIDLRGPAVIYNEN---------------------IRESFLSKSSSSY  137 (395)
T ss_dssp             EEE---S-SEEEEEE-BTS-EEEEEETTSEEEEEETTTTEEEEEEE---------------------GGG--T-SS----
T ss_pred             hheeccCCcEeEEecCCCc-EEEEEecCCcEEEEECCCCeEEeecc---------------------ccccccccccccC
Confidence            3334456899999998555 89999999999999998754321000                     0000001123445


Q ss_pred             ccEEEec-----cCC----eEEEEECCCeEEEEeccc---CceeEE----E-ECCeeeEEEE-ECCC-------------
Q psy2107         278 ISAVQWT-----AVD----EIITSSWDHTLKIWDAEL---GGMKSE----I-VGNKSFFDVH-YSPL-------------  326 (391)
Q Consensus       278 v~~~~~~-----~~~----~l~s~~~dg~i~iwd~~~---~~~~~~----~-~~~~~i~~~~-~~p~-------------  326 (391)
                      ++++.|.     .++    .+++|+..|.+.+|.+.-   +.....    . ....++..+. ++.+             
T Consensus       138 vt~ieF~vm~~~~D~ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~  217 (395)
T PF08596_consen  138 VTSIEFSVMTLGGDGYSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQ  217 (395)
T ss_dssp             EEEEEEEEEE-TTSSSEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHH
T ss_pred             eeEEEEEEEecCCCcccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhh
Confidence            7777776     233    388899999999998752   211111    1 2233443333 2111             


Q ss_pred             --------CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC----CCCCCEEEEeeCCCcEEEEec
Q psy2107         327 --------SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS----PIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       327 --------~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~----~~~~~~l~s~~~dg~v~iwdl  390 (391)
                              ..+++++ .+..++++.+...+   .........-....+.+-    ...+..|++-..+|.|+++.|
T Consensus       218 ~l~~g~~i~g~vVvv-Se~~irv~~~~~~k---~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SL  289 (395)
T PF08596_consen  218 GLSKGISIPGYVVVV-SESDIRVFKPPKSK---GAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSL  289 (395)
T ss_dssp             GGGGT----EEEEEE--SSEEEEE-TT------EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEET
T ss_pred             ccccCCCcCcEEEEE-cccceEEEeCCCCc---ccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEEC
Confidence                    1244444 47789999987644   222222222233344442    114567888899999999875

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.96  E-value=0.0012  Score=59.27  Aligned_cols=141  Identities=16%  Similarity=0.092  Sum_probs=79.9

Q ss_pred             CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         203 HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       203 ~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      ..-....+.++|+|+++++ +.||.-.++....                               ....   ..+.-...+
T Consensus        31 ~~~~p~~ls~npngr~v~V-~g~geY~iyt~~~-------------------------------~r~k---~~G~g~~~v   75 (443)
T PF04053_consen   31 CEIYPQSLSHNPNGRFVLV-CGDGEYEIYTALA-------------------------------WRNK---AFGSGLSFV   75 (443)
T ss_dssp             -SS--SEEEE-TTSSEEEE-EETTEEEEEETTT-------------------------------TEEE---EEEE-SEEE
T ss_pred             CCcCCeeEEECCCCCEEEE-EcCCEEEEEEccC-------------------------------Cccc---ccCceeEEE
Confidence            3455789999999998888 5567777777322                               1111   123446788


Q ss_pred             eccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc
Q psy2107         283 WTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      |.+.+.+++-...++|.|+.--+......+..+..+..+-.   |.+|+..+ ++.|.+||+.+++   .++.+...  +
T Consensus        76 w~~~n~yAv~~~~~~I~I~kn~~~~~~k~i~~~~~~~~If~---G~LL~~~~-~~~i~~yDw~~~~---~i~~i~v~--~  146 (443)
T PF04053_consen   76 WSSRNRYAVLESSSTIKIYKNFKNEVVKSIKLPFSVEKIFG---GNLLGVKS-SDFICFYDWETGK---LIRRIDVS--A  146 (443)
T ss_dssp             E-TSSEEEEE-TTS-EEEEETTEE-TT-----SS-EEEEE----SSSEEEEE-TTEEEEE-TTT-----EEEEESS---E
T ss_pred             EecCccEEEEECCCeEEEEEcCccccceEEcCCcccceEEc---CcEEEEEC-CCCEEEEEhhHcc---eeeEEecC--C
Confidence            88888888888899999963223333334444433443332   88887776 4489999998876   77777533  3


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      |..+.|++ ++.+++-.+.+ .+.|++
T Consensus       147 vk~V~Ws~-~g~~val~t~~-~i~il~  171 (443)
T PF04053_consen  147 VKYVIWSD-DGELVALVTKD-SIYILK  171 (443)
T ss_dssp             -EEEEE-T-TSSEEEEE-S--SEEEEE
T ss_pred             CcEEEEEC-CCCEEEEEeCC-eEEEEE
Confidence            89999999 55677777755 666654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.96  E-value=0.0078  Score=50.43  Aligned_cols=229  Identities=10%  Similarity=0.047  Sum_probs=129.1

Q ss_pred             EEEEEECCC-eEEEEcC-CCceEEeccCCCCCee--EEEEEecCCCCeEEEEEe-----CCCcEEEEeecCCCCceeEEE
Q psy2107         128 WILTGCYDH-SVHIWTR-RGEHKLNIPGHGGPVK--GVAWLYNDGKDAAFISVS-----TDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       128 ~l~t~~~dg-~i~iwd~-~~~~~~~~~~~~~~v~--~l~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      .++.+-.-| ...+||. ++.....+....+.-.  .-.|   ++++++|++.-     ..|.|-|||..   .....+.
T Consensus        19 avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~f---s~dG~~LytTEnd~~~g~G~IgVyd~~---~~~~ri~   92 (305)
T PF07433_consen   19 AVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVF---SPDGRLLYTTENDYETGRGVIGVYDAA---RGYRRIG   92 (305)
T ss_pred             EEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEE---cCCCCEEEEeccccCCCcEEEEEEECc---CCcEEEe
Confidence            444554444 3556676 3333333332222111  2467   77898888764     35899999954   4667788


Q ss_pred             EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee--e--cCc
Q psy2107         199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT--L--KGH  274 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~  274 (391)
                      .+..|.-.-..+.+.|+++.|+++-.  -|.- ..++++....        ...-.....+.+..+...+..  +  ..|
T Consensus        93 E~~s~GIGPHel~l~pDG~tLvVANG--GI~T-hpd~GR~kLN--------l~tM~psL~~ld~~sG~ll~q~~Lp~~~~  161 (305)
T PF07433_consen   93 EFPSHGIGPHELLLMPDGETLVVANG--GIET-HPDSGRAKLN--------LDTMQPSLVYLDARSGALLEQVELPPDLH  161 (305)
T ss_pred             EecCCCcChhhEEEcCCCCEEEEEcC--CCcc-CcccCceecC--------hhhcCCceEEEecCCCceeeeeecCcccc
Confidence            88888777788999999987777642  1210 0111111000        000011112222333444433  4  347


Q ss_pred             cCcccEEEeccCCeEEEEECC-C-------eEEEEecccCceeEEEEC--------CeeeEEEEECCCCCEEEEee-CCC
Q psy2107         275 KEAISAVQWTAVDEIITSSWD-H-------TLKIWDAELGGMKSEIVG--------NKSFFDVHYSPLSKLVITAS-ADK  337 (391)
Q Consensus       275 ~~~v~~~~~~~~~~l~s~~~d-g-------~i~iwd~~~~~~~~~~~~--------~~~i~~~~~~p~~~~l~~g~-~dg  337 (391)
                      +.+|..+++.+++.++.+... |       -|-+++  .+..+..+..        ...+-++++++++.++++.+ ..+
T Consensus       162 ~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg  239 (305)
T PF07433_consen  162 QLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RGGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGG  239 (305)
T ss_pred             ccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CCCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCC
Confidence            788999999988887766532 2       133333  3333333332        24688999999998886655 567


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      .+.+||..++.   ++....-  ..+-.++-.+ ++ +++|.+..
T Consensus       240 ~~~~~d~~tg~---~~~~~~l--~D~cGva~~~-~~-f~~ssG~G  277 (305)
T PF07433_consen  240 RVAVWDAATGR---LLGSVPL--PDACGVAPTD-DG-FLVSSGQG  277 (305)
T ss_pred             EEEEEECCCCC---Eeecccc--CceeeeeecC-Cc-eEEeCCCc
Confidence            89999988876   4443322  2356666665 33 66666643

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.93  E-value=0.0021  Score=55.93  Aligned_cols=115  Identities=10%  Similarity=0.200  Sum_probs=73.2

Q ss_pred             CccCcccEEEeccCCeEEEEECCCeEEEEecccCc-eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG-MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      ...++|++++--. +.++++ ..+.|.+|++...+ ....-..+.++...+....++++++|.....+.++..+......
T Consensus        86 ~~~g~V~ai~~~~-~~lv~~-~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l  163 (321)
T PF03178_consen   86 EVKGPVTAICSFN-GRLVVA-VGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKNYILVGDAMKSVSLLRYDEENNKL  163 (321)
T ss_dssp             EESS-EEEEEEET-TEEEEE-ETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETTEEEEEESSSSEEEEEEETTTE-E
T ss_pred             eecCcceEhhhhC-CEEEEe-ecCEEEEEEccCcccchhhheecceEEEEEEeccccEEEEEEcccCEEEEEEEccCCEE
Confidence            3467888888763 454444 46899999999887 55544444433333333347799999988889988554422211


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....-......++++.|-+++ ..++.+..+|.+.++..
T Consensus       164 ~~va~d~~~~~v~~~~~l~d~-~~~i~~D~~gnl~~l~~  201 (321)
T PF03178_consen  164 ILVARDYQPRWVTAAEFLVDE-DTIIVGDKDGNLFVLRY  201 (321)
T ss_dssp             EEEEEESS-BEEEEEEEE-SS-SEEEEEETTSEEEEEEE
T ss_pred             EEEEecCCCccEEEEEEecCC-cEEEEEcCCCeEEEEEE
Confidence            111222345578999998645 58999999999998764

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit

Probab=97.86  E-value=0.016  Score=50.51  Aligned_cols=220  Identities=10%  Similarity=0.075  Sum_probs=121.4

Q ss_pred             CeEEEEcCC-CceEEecc-CCCCCeeEEEEEecCC----CCeEEEEEeC----------CCcEEEEeecCC---CCceeE
Q psy2107         136 HSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYNDG----KDAAFISVST----------DQTAMIWEWKVE---SNSIEC  196 (391)
Q Consensus       136 g~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~----~~~~l~s~~~----------dg~v~iwd~~~~---~~~~~~  196 (391)
                      +.|++.|.. ...+..+. .....+.+++......    ...+++.|..          .|.|.++++...   ....+.
T Consensus         2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~   81 (321)
T PF03178_consen    2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL   81 (321)
T ss_dssp             -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred             cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence            367888873 33433322 2344566666554343    2567877754          288999997642   123344


Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE  276 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (391)
                      +.... ..++|++++-- ++. |+++. .+.|.+|++...+.                          ......+. ...
T Consensus        82 i~~~~-~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~--------------------------l~~~~~~~-~~~  130 (321)
T PF03178_consen   82 IHSTE-VKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKT--------------------------LLKKAFYD-SPF  130 (321)
T ss_dssp             EEEEE-ESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSS--------------------------EEEEEEE--BSS
T ss_pred             EEEEe-ecCcceEhhhh-CCE-EEEee-cCEEEEEEccCccc--------------------------chhhheec-ceE
Confidence            43333 47889998877 343 44443 47899999976330                          11122222 223


Q ss_pred             cccEEEeccCCeEEEEECCCeEEEEeccc-CceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-----
Q psy2107         277 AISAVQWTAVDEIITSSWDHTLKIWDAEL-GGMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK-----  347 (391)
Q Consensus       277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~-----  347 (391)
                      .+.++... +++++.|.....+.++..+. ...+..+.   ....++++.+-++++.++++..+|.+.++.....     
T Consensus       131 ~i~sl~~~-~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~  209 (321)
T PF03178_consen  131 YITSLSVF-KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR  209 (321)
T ss_dssp             SEEEEEEE-TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred             EEEEEecc-ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc
Confidence            55555554 45889998888888875543 22222222   2346888888866679999999999999976521     


Q ss_pred             Ccc-eEEEEec-cccCcEEEE---EECCC--CC-----CEEEEeeCCCcEEE
Q psy2107         348 EGA-IVKSTFS-SHKEWVQSV---RWSPI--DP-----QLFVSASFDNSVKL  387 (391)
Q Consensus       348 ~~~-~~~~~~~-~h~~~v~~~---~~~~~--~~-----~~l~s~~~dg~v~i  387 (391)
                      ... .+..... .....|+++   ++.|.  +.     ..++-++.+|.|.+
T Consensus       210 ~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~  261 (321)
T PF03178_consen  210 DGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGV  261 (321)
T ss_dssp             TTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEE
T ss_pred             cccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEE
Confidence            111 2222222 234567877   55551  22     24777888898863

CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....

>smart00320 WD40 WD40 repeats

Probab=97.83  E-value=8.1e-05  Score=41.14  Aligned_cols=38  Identities=24%  Similarity=0.452  Sum_probs=33.4

Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                      .+...+..|...|.++.|++++..+++++.|+.+++|+
T Consensus         3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence            34566677889999999999999999999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=97.82  E-value=0.013  Score=48.30  Aligned_cols=205  Identities=14%  Similarity=0.117  Sum_probs=112.1

Q ss_pred             CCCcEEEEEecC--C-EEEEEECCCeEEEEcCCCceEEeccCC-CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFHN--D-WILTGCYDHSVHIWTRRGEHKLNIPGH-GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~~--~-~l~t~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      -.+.++.++|++  + ++++....+.|..++.+++.+..+.-. .+..-.|++   -.++.++++.-.++.+.++++...
T Consensus        20 ~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~G~vlr~i~l~g~~D~EgI~y---~g~~~~vl~~Er~~~L~~~~~~~~   96 (248)
T PF06977_consen   20 ILDELSGLTYNPDTGTLFAVQDEPGEIYELSLDGKVLRRIPLDGFGDYEGITY---LGNGRYVLSEERDQRLYIFTIDDD   96 (248)
T ss_dssp             --S-EEEEEEETTTTEEEEEETTTTEEEEEETT--EEEEEE-SS-SSEEEEEE----STTEEEEEETTTTEEEEEEE---
T ss_pred             ccCCccccEEcCCCCeEEEEECCCCEEEEEcCCCCEEEEEeCCCCCCceeEEE---ECCCEEEEEEcCCCcEEEEEEecc
Confidence            344699999983  3 777777888998889888877765433 356778888   556667776666899999987433


Q ss_pred             CCce--eEEEEEe-----cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         191 SNSI--ECIHVCR-----GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       191 ~~~~--~~~~~~~-----~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +...  .....+.     .+...+..++|++.++.|+.+-......+|.++......       ....           .
T Consensus        97 ~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~-------~~~~-----------~  158 (248)
T PF06977_consen   97 TTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGF-------DLFV-----------S  158 (248)
T ss_dssp             -TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS---------EE-----------E
T ss_pred             ccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCcc-------ceee-----------c
Confidence            2221  1112221     345679999999988888888877777787775311000       0000           0


Q ss_pred             CCCceeeecCccCcccEEEeccC-Ce-EEEEECCCeEEEEecccCceeEEEECCe----------eeEEEEECCCCCEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAV-DE-IITSSWDHTLKIWDAELGGMKSEIVGNK----------SFFDVHYSPLSKLVI  331 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~-~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~i~~~~~~p~~~~l~  331 (391)
                      ..............+.+++++|. +. ++.+..+..|..+| .+|+.+..+....          ..-.++|.++|++.+
T Consensus       159 ~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI  237 (248)
T PF06977_consen  159 DDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI  237 (248)
T ss_dssp             E-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE
T ss_pred             cccccccccceeccccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE
Confidence            00000001112334678888843 44 56666778888899 6788777665332          467899999987666


Q ss_pred             EeeCCCcEEEE
Q psy2107         332 TASADKQIRLY  342 (391)
Q Consensus       332 ~g~~dg~i~iw  342 (391)
                      ++ .-+..++|
T Consensus       238 vs-EpNlfy~f  247 (248)
T PF06977_consen  238 VS-EPNLFYRF  247 (248)
T ss_dssp             EE-TTTEEEEE
T ss_pred             Ec-CCceEEEe
Confidence            54 55555544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>smart00320 WD40 WD40 repeats

Probab=97.80  E-value=9e-05  Score=40.93  Aligned_cols=37  Identities=43%  Similarity=0.646  Sum_probs=31.9

Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +...+..|...|.++.|++ ...++++++.|+.+++||
T Consensus         4 ~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~d~~~~~~~   40 (40)
T smart00320        4 LLKTLKGHTGPVTSVAFSP-DGKYLASASDDGTIKLWD   40 (40)
T ss_pred             EEEEEEecCCceeEEEECC-CCCEEEEecCCCeEEEcC
Confidence            4556678889999999999 557899999999999996

Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.

>KOG4640|consensus

Probab=97.62  E-value=0.00047  Score=61.87  Aligned_cols=77  Identities=9%  Similarity=0.105  Sum_probs=64.8

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeE-EEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLE-TVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                      -...+.-+.|   +|...++|.+..+|.|.+..++     +..+.++.-|...++ +++|.|+|+.|+.|-.||+|++.|
T Consensus        19 l~~~i~~~ew---nP~~dLiA~~t~~gelli~R~n-----~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~D   90 (665)
T KOG4640|consen   19 LPINIKRIEW---NPKMDLIATRTEKGELLIHRLN-----WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHD   90 (665)
T ss_pred             cccceEEEEE---cCccchhheeccCCcEEEEEec-----cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEE
Confidence            3455778899   6678899999999999998742     566778876777777 999999999999999999999999


Q ss_pred             CCCCCC
Q psy2107         233 ADISKE  238 (391)
Q Consensus       233 ~~~~~~  238 (391)
                      +.++..
T Consensus        91 ve~~~~   96 (665)
T KOG4640|consen   91 VEKGGR   96 (665)
T ss_pred             ccCCCc
Confidence            987554

>KOG3621|consensus

Probab=97.61  E-value=0.00057  Score=62.17  Aligned_cols=104  Identities=15%  Similarity=0.149  Sum_probs=77.7

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE---Eeccc
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS---TFSSH  359 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~~~~h  359 (391)
                      ...+++.|+.-|.+++|+-..+.....-.  .+..+..+..+++..++|+|+..|.|.++-+.....+....   .-..|
T Consensus        44 t~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~  123 (726)
T KOG3621|consen   44 TEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSH  123 (726)
T ss_pred             CCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccC
Confidence            45679999999999999977665443333  34456678889999999999999999999887633222211   11237


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ...|++++|++ ++..+.+|..-|+|..-.
T Consensus       124 ~~rVTal~Ws~-~~~k~ysGD~~Gkv~~~~  152 (726)
T KOG3621|consen  124 KCRVTALEWSK-NGMKLYSGDSQGKVVLTE  152 (726)
T ss_pred             CceEEEEEecc-cccEEeecCCCceEEEEE
Confidence            78999999999 667799999999987644

>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins

Probab=97.59  E-value=0.0022  Score=61.00  Aligned_cols=118  Identities=14%  Similarity=0.164  Sum_probs=75.4

Q ss_pred             CceeeecCccCc-ccEEEec------cCCeEEEEECCCeEEEEecccCc--eeE----EEECCeeeEEEEECCCCCEEEE
Q psy2107         266 TPLITLKGHKEA-ISAVQWT------AVDEIITSSWDHTLKIWDAELGG--MKS----EIVGNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       266 ~~~~~~~~~~~~-v~~~~~~------~~~~l~s~~~dg~i~iwd~~~~~--~~~----~~~~~~~i~~~~~~p~~~~l~~  332 (391)
                      +.+..+..|... |..++-.      .+...+.|-.+..+..||.+-..  ++.    .+.......|++-+.+| +||+
T Consensus       515 KVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~iav  593 (794)
T PF08553_consen  515 KVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIAV  593 (794)
T ss_pred             cEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEEE
Confidence            345555555432 4444322      12347788889999999998643  221    12223367777776554 7889


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      |+.+|.||+||-- +  ......+.+-..+|.+|..+.||..+|+||  +..+.+++
T Consensus       594 gs~~G~IRLyd~~-g--~~AKT~lp~lG~pI~~iDvt~DGkwilaTc--~tyLlLi~  645 (794)
T PF08553_consen  594 GSNKGDIRLYDRL-G--KRAKTALPGLGDPIIGIDVTADGKWILATC--KTYLLLID  645 (794)
T ss_pred             EeCCCcEEeeccc-c--hhhhhcCCCCCCCeeEEEecCCCcEEEEee--cceEEEEE
Confidence            9999999999942 2  223445667789999999999665555555  34666665

Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=97.58  E-value=0.037  Score=46.99  Aligned_cols=225  Identities=12%  Similarity=0.110  Sum_probs=118.4

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE--E--
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC--I--  197 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~--  197 (391)
                      +..++.|+.|+.+| +.+++. ......... +...|..+...|.   -+.+++- .|+.+.++++..-......  .  
T Consensus         4 ~~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~---~~~llvL-sd~~l~~~~L~~l~~~~~~~~~~~   77 (275)
T PF00780_consen    4 DSWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPE---LNLLLVL-SDGQLYVYDLDSLEPVSTSAPLAF   77 (275)
T ss_pred             ccCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecc---cCEEEEE-cCCccEEEEchhhccccccccccc
Confidence            44588999999999 899988 332222222 3334999998653   3344433 3599999997532211100  0  


Q ss_pred             ------EEEecCCCCeEEEE--EcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC-Cce
Q psy2107         198 ------HVCRGHERGLETVT--VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR-TPL  268 (391)
Q Consensus       198 ------~~~~~~~~~v~~l~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  268 (391)
                            .........+...+  -...+...+.....+.|.+|.......                         .. ...
T Consensus        78 ~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~-------------------------~f~~~~  132 (275)
T PF00780_consen   78 PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRN-------------------------SFSKLL  132 (275)
T ss_pred             cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcc-------------------------ccccee
Confidence                  00111233455554  122344444445556899998865211                         01 233


Q ss_pred             eeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-------------eeeEEEEECCCCCEEEEeeC
Q psy2107         269 ITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------------KSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~i~~~~~~p~~~~l~~g~~  335 (391)
                      ..+. -...+..++|. ++.++.|.. ....+.|+.++.....+...             .++..+.. +++.+|++-  
T Consensus       133 ke~~-lp~~~~~i~~~-~~~i~v~~~-~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--  206 (275)
T PF00780_consen  133 KEIS-LPDPPSSIAFL-GNKICVGTS-KGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--  206 (275)
T ss_pred             EEEE-cCCCcEEEEEe-CCEEEEEeC-CceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--
Confidence            3333 24678888888 355666654 44778888877654433211             13333333 345666643  


Q ss_pred             CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..-.+.|..........-.+   ...+.++++..  + +|+..+. +.|.||++.
T Consensus       207 ~~~g~fv~~~G~~~r~~~i~W---~~~p~~~~~~~--p-yli~~~~-~~iEV~~~~  255 (275)
T PF00780_consen  207 DNIGVFVNKNGEPSRKSTIQW---SSAPQSVAYSS--P-YLIAFSS-NSIEVRSLE  255 (275)
T ss_pred             cceEEEEcCCCCcCcccEEEc---CCchhEEEEEC--C-EEEEECC-CEEEEEECc
Confidence            333344454322111111122   23466676643  3 4555554 459999873

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals

Probab=97.57  E-value=0.0016  Score=57.69  Aligned_cols=140  Identities=9%  Similarity=0.056  Sum_probs=85.7

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCC-CCCCCCCC-----Cccccccccc--cc---c---CCCCCceeee
Q psy2107         206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERG-DPSENGDE-----GTTSKKRKKE--YS---S---ASSRTPLITL  271 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~-~~~~~~~~-----~~~~~~~~~~--~~---~---~~~~~~~~~~  271 (391)
                      .|+.+.|.++...|++|...|.|.+|.....+... ........     ..........  ..   .   .....+...+
T Consensus         3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~   82 (395)
T PF08596_consen    3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL   82 (395)
T ss_dssp             -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred             eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence            58899999998899999999999999887654433 11000000     0000000000  00   0   1124455666


Q ss_pred             cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC---------eeeEEEEEC-----CCC---CEEEEee
Q psy2107         272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN---------KSFFDVHYS-----PLS---KLVITAS  334 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------~~i~~~~~~-----p~~---~~l~~g~  334 (391)
                      ....++|++++.++-|.++.|..+|.+.|.|++....+..-...         ..++++.|+     .|+   -.+++|+
T Consensus        83 ~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGT  162 (395)
T PF08596_consen   83 DAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGT  162 (395)
T ss_dssp             ---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEE
T ss_pred             eccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEe
Confidence            67789999999999999999999999999999988777664321         246666665     233   3788999


Q ss_pred             CCCcEEEEcCC
Q psy2107         335 ADKQIRLYDPK  345 (391)
Q Consensus       335 ~dg~i~iwd~~  345 (391)
                      ..|.+.+|.+.
T Consensus       163 n~G~v~~fkIl  173 (395)
T PF08596_consen  163 NSGNVLTFKIL  173 (395)
T ss_dssp             TTSEEEEEEEE
T ss_pred             CCCCEEEEEEe
Confidence            99999999875

The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.

>PHA02713 hypothetical protein; Provisional

Probab=97.54  E-value=0.013  Score=54.97  Aligned_cols=90  Identities=10%  Similarity=0.070  Sum_probs=47.9

Q ss_pred             eEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCC------CcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         297 TLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASAD------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      .+..||..+.+-...-.  ....-.+++ .-+++..+.|+.+      ..+..||+.+.+....+..+.........+.+
T Consensus       433 ~ve~YDP~td~W~~v~~m~~~r~~~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~  511 (557)
T PHA02713        433 KVIRYDTVNNIWETLPNFWTGTIRPGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH  511 (557)
T ss_pred             eEEEECCCCCeEeecCCCCcccccCcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE
Confidence            46778877654322111  111111122 2246666666643      24678998872223334444444444444444


Q ss_pred             CCCCCCEEEEeeCCC--cEEEEec
Q psy2107         369 SPIDPQLFVSASFDN--SVKLWDL  390 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg--~v~iwdl  390 (391)
                         ++.+.+.||.||  .+-.||.
T Consensus       512 ---~~~iyv~Gg~~~~~~~e~yd~  532 (557)
T PHA02713        512 ---DNTIMMLHCYESYMLQDTFNV  532 (557)
T ss_pred             ---CCEEEEEeeecceeehhhcCc
Confidence               668899999988  5666654

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.53  E-value=0.076  Score=49.19  Aligned_cols=93  Identities=17%  Similarity=0.143  Sum_probs=54.3

Q ss_pred             eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe------------------eCCCcEEEEcCCCCCc
Q psy2107         288 EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA------------------SADKQIRLYDPKVKEG  349 (391)
Q Consensus       288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g------------------~~dg~i~iwd~~~~~~  349 (391)
                      .++.++.+|.+...|.++|+.+......  ...++.+|  ..+..+                  ..+|.+.-.|..+++ 
T Consensus       303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~--~~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~-  377 (488)
T cd00216         303 AIVHAPKNGFFYVLDRTTGKLISARPEV--EQPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGK-  377 (488)
T ss_pred             EEEEECCCceEEEEECCCCcEeeEeEee--ccccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCc-
Confidence            4778889999999999999988776532  11233343  222221                  235677777877665 


Q ss_pred             ceEEEEeccc--c------CcE--EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         350 AIVKSTFSSH--K------EWV--QSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 ~~~~~~~~~h--~------~~v--~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        .+-.....  .      .+.  ..+..   .+.+++.++.||.|+.+|.
T Consensus       378 --~~W~~~~~~~~~~~~~g~~~~~~~~~~---~g~~v~~g~~dG~l~ald~  423 (488)
T cd00216         378 --VVWEKREGTIRDSWNIGFPHWGGSLAT---AGNLVFAGAADGYFRAFDA  423 (488)
T ss_pred             --EeeEeeCCccccccccCCcccCcceEe---cCCeEEEECCCCeEEEEEC
Confidence              22222211  0      111  12222   2346777888999988875

The alignment model contains an 8-bladed beta-propeller.

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.51  E-value=0.024  Score=52.37  Aligned_cols=95  Identities=12%  Similarity=0.130  Sum_probs=72.3

Q ss_pred             CCCeEEEEeccc-----CceeEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCc---------ceEEEEecc
Q psy2107         294 WDHTLKIWDAEL-----GGMKSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEG---------AIVKSTFSS  358 (391)
Q Consensus       294 ~dg~i~iwd~~~-----~~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~---------~~~~~~~~~  358 (391)
                      .++.|.+.|.++     ...+..+........+.++|||+++++++ .+++|.|+|+...+.         ..+.....-
T Consensus       294 ~gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevev  373 (635)
T PRK02888        294 GGSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPEL  373 (635)
T ss_pred             CCCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeecc
Confidence            367899999998     56778888888899999999999877654 589999999876432         112333322


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .......+|.+ +++.+.|.-.|..|-.||+
T Consensus       374 -GlGPLHTaFDg-~G~aytslf~dsqv~kwn~  403 (635)
T PRK02888        374 -GLGPLHTAFDG-RGNAYTTLFLDSQIVKWNI  403 (635)
T ss_pred             -CCCcceEEECC-CCCEEEeEeecceeEEEeh
Confidence             23456788988 5568889999999999996

>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=97.48  E-value=0.048  Score=45.85  Aligned_cols=151  Identities=10%  Similarity=0.094  Sum_probs=96.6

Q ss_pred             EEEcCCCCEEEEEe-----CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         210 VTVSESRQQFATGG-----WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       210 l~~~~~~~~l~sg~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      -.|+++|++|++.-     ..|.|-|||...+                            ...+..+..|.-.-..+.+.
T Consensus        56 g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~----------------------------~~ri~E~~s~GIGPHel~l~  107 (305)
T PF07433_consen   56 GVFSPDGRLLYTTENDYETGRGVIGVYDAARG----------------------------YRRIGEFPSHGIGPHELLLM  107 (305)
T ss_pred             EEEcCCCCEEEEeccccCCCcEEEEEEECcCC----------------------------cEEEeEecCCCcChhhEEEc
Confidence            46999999998863     3588999999721                            22444555555445556666


Q ss_pred             cCC-eEEEE------------------ECCCeEEEEecccCceeEEEEC----Ce-eeEEEEECCCCCEEEEeeCCCc--
Q psy2107         285 AVD-EIITS------------------SWDHTLKIWDAELGGMKSEIVG----NK-SFFDVHYSPLSKLVITASADKQ--  338 (391)
Q Consensus       285 ~~~-~l~s~------------------~~dg~i~iwd~~~~~~~~~~~~----~~-~i~~~~~~p~~~~l~~g~~dg~--  338 (391)
                      |++ .|+.+                  +.+.++...|..+|+.+.....    +. ++..+++.++|..++..-..|.  
T Consensus       108 pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~  187 (305)
T PF07433_consen  108 PDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPG  187 (305)
T ss_pred             CCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCC
Confidence            555 34433                  2344566777888888777543    22 7999999999887777654442  


Q ss_pred             -----EEEEcCCCCCcceEEE----EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         339 -----IRLYDPKVKEGAIVKS----TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       339 -----i~iwd~~~~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                           |.+++....  .....    ....-.+.+-+|++++++..+.+|+=..|.+.+||.
T Consensus       188 ~~~PLva~~~~g~~--~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~  246 (305)
T PF07433_consen  188 DAPPLVALHRRGGA--LRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDA  246 (305)
T ss_pred             ccCCeEEEEcCCCc--ceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEEC
Confidence                 444442211  10100    112234679999999966666678888899999985

>KOG3617|consensus

Probab=97.46  E-value=0.00028  Score=65.50  Aligned_cols=106  Identities=15%  Similarity=0.284  Sum_probs=82.3

Q ss_pred             EEEeccCCe-EEEEE----CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         280 AVQWTAVDE-IITSS----WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       280 ~~~~~~~~~-l~s~~----~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      -.+|+|..- ++.++    ..|.|.|| ..+|++......+-.+++++|+|..-.|+.|-.-|.+.+|...+.+   ...
T Consensus        20 i~SWHPsePlfAVA~fS~er~GSVtIf-adtGEPqr~Vt~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e---~ht   95 (1416)
T KOG3617|consen   20 ISSWHPSEPLFAVASFSPERGGSVTIF-ADTGEPQRDVTYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTE---THT   95 (1416)
T ss_pred             ccccCCCCceeEEEEecCCCCceEEEE-ecCCCCCcccccceehhhhccChHHHHHhhccccceeEEEecCCce---eee
Confidence            346675443 44443    46888888 4677776666666677889999998899999999999999977655   444


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....|..+|..+.||| ++..++|+..-|.|.+|..
T Consensus        96 v~~th~a~i~~l~wS~-~G~~l~t~d~~g~v~lwr~  130 (1416)
T KOG3617|consen   96 VVETHPAPIQGLDWSH-DGTVLMTLDNPGSVHLWRY  130 (1416)
T ss_pred             eccCCCCCceeEEecC-CCCeEEEcCCCceeEEEEe
Confidence            5567999999999999 5668999999999999964

>KOG4640|consensus

Probab=97.37  E-value=0.0011  Score=59.53  Aligned_cols=92  Identities=15%  Similarity=0.144  Sum_probs=74.1

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCccc-EEE
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS-AVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~  282 (391)
                      ...+.-+.|+|.-.++|.+..+|.|.+..+.                              ...+.++.-|...++ +++
T Consensus        20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n------------------------------~qRlwtip~p~~~v~~sL~   69 (665)
T KOG4640|consen   20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN------------------------------WQRLWTIPIPGENVTASLC   69 (665)
T ss_pred             ccceEEEEEcCccchhheeccCCcEEEEEec------------------------------cceeEeccCCCCccceeee
Confidence            3467889999999999999999999998875                              234666766777777 999


Q ss_pred             eccCCe-EEEEECCCeEEEEecccCceeEE--EECCeeeEEEEECC
Q psy2107         283 WTAVDE-IITSSWDHTLKIWDAELGGMKSE--IVGNKSFFDVHYSP  325 (391)
Q Consensus       283 ~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~i~~~~~~p  325 (391)
                      |.++|. ++.|-.||+|++.|+.++..+..  +....+|.++.|++
T Consensus        70 W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~  115 (665)
T KOG4640|consen   70 WRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDR  115 (665)
T ss_pred             ecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeeccc
Confidence            997666 77788999999999999988877  45555777887763

>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment

Probab=97.36  E-value=0.09  Score=47.54  Aligned_cols=212  Identities=12%  Similarity=0.189  Sum_probs=104.0

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe-ecCCCCcee
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE-WKVESNSIE  195 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd-~~~~~~~~~  195 (391)
                      ...+.++  |+.++. +.||.-.|+.........    .+......|   ...+ .+|+-...++|.++. +.  ...  
T Consensus        35 p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k~----~G~g~~~vw---~~~n-~yAv~~~~~~I~I~kn~~--~~~--  101 (443)
T PF04053_consen   35 PQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNKA----FGSGLSFVW---SSRN-RYAVLESSSTIKIYKNFK--NEV--  101 (443)
T ss_dssp             -SEEEE-TTSSEEEE-EETTEEEEEETTTTEEEE----EEE-SEEEE----TSS-EEEEE-TTS-EEEEETTE--E-T--
T ss_pred             CeeEEECCCCCEEEE-EcCCEEEEEEccCCcccc----cCceeEEEE---ecCc-cEEEEECCCeEEEEEcCc--ccc--
Confidence            4466776  556666 677888888753332222    234456788   4433 477777788999963 21  111  


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                       ...+.. ...+..|-.   |.+|+..+.+ .|.+||+.++                             +.+..+... 
T Consensus       102 -~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~-----------------------------~~i~~i~v~-  145 (443)
T PF04053_consen  102 -VKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETG-----------------------------KLIRRIDVS-  145 (443)
T ss_dssp             -T------SS-EEEEE----SSSEEEEETT-EEEEE-TTT-------------------------------EEEEESS--
T ss_pred             -ceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHc-----------------------------ceeeEEecC-
Confidence             111111 123444433   7767666554 8999999873                             355555432 


Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccC-----------ceeEEEEC-CeeeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELG-----------GMKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----------~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                       +|..+.|++++.+++-..+..+.|++....           .....+.. ...|.+.+|..+  .++-.+.. .++.+ 
T Consensus       146 -~vk~V~Ws~~g~~val~t~~~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkYl-  220 (443)
T PF04053_consen  146 -AVKYVIWSDDGELVALVTKDSIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKYL-  220 (443)
T ss_dssp             -E-EEEEE-TTSSEEEEE-S-SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEEE-
T ss_pred             -CCcEEEEECCCCEEEEEeCCeEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEEE-
Confidence             489999998776555555667888775433           02223322 557888888754  44433333 66653 


Q ss_pred             CCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       ..++    ...+..-..++.=+...| ....+.....|+.|..+.+
T Consensus       221 -~~Ge----~~~i~~ld~~~yllgy~~-~~~~ly~~Dr~~~v~~~~l  261 (443)
T PF04053_consen  221 -VNGE----TGIIAHLDKPLYLLGYLP-KENRLYLIDRDGNVISYEL  261 (443)
T ss_dssp             -ETTE----EEEEEE-SS--EEEEEET-TTTEEEEE-TT--EEEEE-
T ss_pred             -EcCC----cceEEEcCCceEEEEEEc-cCCEEEEEECCCCEEEEEE
Confidence             2232    112222234566666776 4456777888888877654

This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=97.31  E-value=0.027  Score=53.00  Aligned_cols=114  Identities=11%  Similarity=0.144  Sum_probs=78.6

Q ss_pred             cccEEEec---cCCeEEEEECCCeEEEEeccc-------C-------------ceeEEEECCeeeEEEEEC--CCCCEEE
Q psy2107         277 AISAVQWT---AVDEIITSSWDHTLKIWDAEL-------G-------------GMKSEIVGNKSFFDVHYS--PLSKLVI  331 (391)
Q Consensus       277 ~v~~~~~~---~~~~l~s~~~dg~i~iwd~~~-------~-------------~~~~~~~~~~~i~~~~~~--p~~~~l~  331 (391)
                      .|+.|...   ....|+.|..||.|.+|.+++       .             ++...+..+..++.++++  ...++||
T Consensus       102 tIN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIA  181 (717)
T PF08728_consen  102 TINFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIA  181 (717)
T ss_pred             eeeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEE
Confidence            35555444   344588999999999997521       0             123444455688999998  7888999


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC--CC---EEEEeeCCCcEEEEec
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID--PQ---LFVSASFDNSVKLWDL  390 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~---~l~s~~~dg~v~iwdl  390 (391)
                      +++....|.||-............-..|...|.+|+|.+++  +.   .+++++-.|.+.+|++
T Consensus       182 VSsNs~~VTVFaf~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  182 VSSNSQEVTVFAFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             EecCCceEEEEEEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            99988899988765432221221122366679999998743  22   7888999999999886

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>PRK02888 nitrous-oxide reductase; Validated

Probab=97.26  E-value=0.042  Score=50.86  Aligned_cols=112  Identities=10%  Similarity=0.027  Sum_probs=63.6

Q ss_pred             CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      ......+.++|||+++++++ .+..+.+.|+.+.+....-..                 ...........- ...-...+
T Consensus       320 GKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~-----------------~~~~~vvaevev-GlGPLHTa  381 (635)
T PRK02888        320 PKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI-----------------KPRDAVVAEPEL-GLGPLHTA  381 (635)
T ss_pred             CCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC-----------------CccceEEEeecc-CCCcceEE
Confidence            45677899999999887665 589999999977443110000                 000011111211 22234567


Q ss_pred             eccCCe-EEEEECCCeEEEEeccc----------CceeEEEECCeeeEEEEE------CCCCCEEEEe
Q psy2107         283 WTAVDE-IITSSWDHTLKIWDAEL----------GGMKSEIVGNKSFFDVHY------SPLSKLVITA  333 (391)
Q Consensus       283 ~~~~~~-l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~i~~~~~------~p~~~~l~~g  333 (391)
                      |.+.+. ..+...|..|..||+..          ...+..+..+..+-.+.-      .|+|++|++.
T Consensus       382 FDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk~l~~~  449 (635)
T PRK02888        382 FDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGKWLVSL  449 (635)
T ss_pred             ECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCCEEEEc
Confidence            776655 44556799999999876          234444443332222222      5667777665

>KOG4441|consensus

Probab=97.22  E-value=0.041  Score=51.63  Aligned_cols=217  Identities=17%  Similarity=0.242  Sum_probs=114.0

Q ss_pred             CCEEEEEECCC------eEEEEcCCCceEE---eccCCCCCeeEEEEEecCCCCeEEEEEeCC-C-----cEEEEeecCC
Q psy2107         126 NDWILTGCYDH------SVHIWTRRGEHKL---NIPGHGGPVKGVAWLYNDGKDAAFISVSTD-Q-----TAMIWEWKVE  190 (391)
Q Consensus       126 ~~~l~t~~~dg------~i~iwd~~~~~~~---~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-g-----~v~iwd~~~~  190 (391)
                      +.+++.|+.++      .+..||.....-.   .+. ....-.+++..    ++...++|+.| |     ++..||  ..
T Consensus       285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~-~~r~~~~~~~~----~~~lYv~GG~~~~~~~l~~ve~YD--~~  357 (571)
T KOG4441|consen  285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMP-SPRCRVGVAVL----NGKLYVVGGYDSGSDRLSSVERYD--PR  357 (571)
T ss_pred             CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCC-cccccccEEEE----CCEEEEEccccCCCcccceEEEec--CC
Confidence            55777777763      6778888443222   222 33334445542    56788899988 3     455566  44


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-----EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL-----LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-----i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      .+.+..+..+...........+  +|.+.++||.||.     +-.||..+.+-                           
T Consensus       358 ~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W---------------------------  408 (571)
T KOG4441|consen  358 TNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKW---------------------------  408 (571)
T ss_pred             CCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCcc---------------------------
Confidence            5555555444433333222222  6778899998864     55677655332                           


Q ss_pred             CceeeecCccCcccEEEeccCCeEEEEECC------CeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCC
Q psy2107         266 TPLITLKGHKEAISAVQWTAVDEIITSSWD------HTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg  337 (391)
                      ..+..+....... .++-..+...++|+.+      .++..||..+.+-...-.  ....-..++.- ++...+.|+.|+
T Consensus       409 ~~va~m~~~r~~~-gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~-~~~iYvvGG~~~  486 (571)
T KOG4441|consen  409 TPVAPMLTRRSGH-GVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL-NGKIYVVGGFDG  486 (571)
T ss_pred             cccCCCCcceeee-EEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE-CCEEEEECCccC
Confidence            1222121111111 1121233345566644      356788877665432222  11111222222 467777887776


Q ss_pred             -----cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         338 -----QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       338 -----~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                           +|..||+.+.+.. .+.........+....+   ++.+.+.|+.||.
T Consensus       487 ~~~~~~VE~ydp~~~~W~-~v~~m~~~rs~~g~~~~---~~~ly~vGG~~~~  534 (571)
T KOG4441|consen  487 TSALSSVERYDPETNQWT-MVAPMTSPRSAVGVVVL---GGKLYAVGGFDGN  534 (571)
T ss_pred             CCccceEEEEcCCCCcee-EcccCccccccccEEEE---CCEEEEEecccCc
Confidence                 3778998876522 23333334444444444   6678899998874

>KOG2079|consensus

Probab=97.19  E-value=0.0019  Score=61.88  Aligned_cols=97  Identities=11%  Similarity=0.184  Sum_probs=67.1

Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      .+..++.|+..|.+...|+..   +..+...-..-.++|++++|+.+|+.++.|-.+|.|.+||+..++           
T Consensus        98 ~~~~ivi~Ts~ghvl~~d~~~---nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k-----------  163 (1206)
T KOG2079|consen   98 VVVPIVIGTSHGHVLLSDMTG---NLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAK-----------  163 (1206)
T ss_pred             eeeeEEEEcCchhhhhhhhhc---ccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCc-----------
Confidence            445688999999999888541   222222223346799999999999999999999999999997743           


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEec----cCCeEEEEECCCe
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT----AVDEIITSSWDHT  297 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~l~s~~~dg~  297 (391)
                                        +++.+..|..+.+.+-+.    .+..++++...|.
T Consensus       164 ------------------~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs  198 (1206)
T KOG2079|consen  164 ------------------ILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS  198 (1206)
T ss_pred             ------------------ceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc
Confidence                              455555555555555443    3334666666665

>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex

Probab=97.19  E-value=0.16  Score=45.71  Aligned_cols=49  Identities=6%  Similarity=-0.006  Sum_probs=33.1

Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .|.+|+.     .+..+..+.-..+.+.++.|+.+. .|++-..||.++++|+..
T Consensus        62 ~I~iys~-----sG~ll~~i~w~~~~iv~~~wt~~e-~LvvV~~dG~v~vy~~~G  110 (410)
T PF04841_consen   62 SIQIYSS-----SGKLLSSIPWDSGRIVGMGWTDDE-ELVVVQSDGTVRVYDLFG  110 (410)
T ss_pred             EEEEECC-----CCCEeEEEEECCCCEEEEEECCCC-eEEEEEcCCEEEEEeCCC
Confidence            3777762     223333333233789999999865 466777999999999853

Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=97.16  E-value=0.077  Score=47.74  Aligned_cols=174  Identities=14%  Similarity=0.132  Sum_probs=92.4

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEE---eCC-CcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISV---STD-QTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~---~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      .+.+=|.++.....+..-...+..-+|+|   ++..++..   ... ..+.+++++  ......+..+.++.   ...+|
T Consensus       174 ~l~~~D~dg~~~~~l~~~~~~~~~p~ws~---~~~~~~y~~f~~~~~~~i~~~~l~--~g~~~~i~~~~g~~---~~P~f  245 (425)
T COG0823         174 ELALGDYDGYNQQKLTDSGSLILTPAWSP---DGKKLAYVSFELGGCPRIYYLDLN--TGKRPVILNFNGNN---GAPAF  245 (425)
T ss_pred             eEEEEccCCcceeEecccCcceeccccCc---CCCceEEEEEecCCCceEEEEecc--CCccceeeccCCcc---CCccC
Confidence            34444445555555555556677777844   44433322   222 357777755  34444455555444   45679


Q ss_pred             cCCCCEEEE-EeCCCcEEE--EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-
Q psy2107         213 SESRQQFAT-GGWDCLLKI--WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-  288 (391)
Q Consensus       213 ~~~~~~l~s-g~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-  288 (391)
                      +|+|+.|+. ...||...+  .|+.+..                              ...+....+.-+.=.|+|++. 
T Consensus       246 spDG~~l~f~~~rdg~~~iy~~dl~~~~------------------------------~~~Lt~~~gi~~~Ps~spdG~~  295 (425)
T COG0823         246 SPDGSKLAFSSSRDGSPDIYLMDLDGKN------------------------------LPRLTNGFGINTSPSWSPDGSK  295 (425)
T ss_pred             CCCCCEEEEEECCCCCccEEEEcCCCCc------------------------------ceecccCCccccCccCCCCCCE
Confidence            999987764 456666544  5554422                              111222222222456776664 


Q ss_pred             -EEEEECCCe--EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-Cc--EEEEcCCCCC
Q psy2107         289 -IITSSWDHT--LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-KQ--IRLYDPKVKE  348 (391)
Q Consensus       289 -l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-g~--i~iwd~~~~~  348 (391)
                       .++.+..|.  |.++|...+...+.......-..-.|+|+|++++..+.. |.  |.+.|+....
T Consensus       296 ivf~Sdr~G~p~I~~~~~~g~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~  361 (425)
T COG0823         296 IVFTSDRGGRPQIYLYDLEGSQVTRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG  361 (425)
T ss_pred             EEEEeCCCCCcceEEECCCCCceeEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence             444455565  555566555442222222222277899999988876643 44  6666665543

>PHA02713 hypothetical protein; Provisional

Probab=97.13  E-value=0.045  Score=51.45  Aligned_cols=95  Identities=11%  Similarity=0.103  Sum_probs=49.2

Q ss_pred             EecCCEEEEEECC------CeEEEEcCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeec
Q psy2107         123 DFHNDWILTGCYD------HSVHIWTRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWK  188 (391)
Q Consensus       123 ~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~  188 (391)
                      ...+..++.|+.+      ..+..||.....-..+..-   ......+..     ++...+.|+.++     ++..||..
T Consensus       301 ~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~-----~g~IYviGG~~~~~~~~sve~Ydp~  375 (557)
T PHA02713        301 IVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVI-----DDTIYAIGGQNGTNVERTIECYTMG  375 (557)
T ss_pred             EECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEE-----CCEEEEECCcCCCCCCceEEEEECC
Confidence            3456677777754      3477788754432322221   112222333     677788888764     37778843


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                        ++.+..+..+.........+.+  ++++.+.||.++
T Consensus       376 --~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~  409 (557)
T PHA02713        376 --DDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTE  409 (557)
T ss_pred             --CCeEEECCCCCcccccccEEEE--CCEEEEEeCCCc
Confidence              4455544433322222222222  567777777653

>KOG2079|consensus

Probab=97.13  E-value=0.0028  Score=60.72  Aligned_cols=110  Identities=15%  Similarity=0.179  Sum_probs=78.7

Q ss_pred             CCcEEEEEecCCEEEEEECCCeEEEEcCCCceE--EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         116 DDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHK--LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       116 ~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ...+.+.+.-+-.++.|+..|.+...|.++...  ..-..-.++|++++|   +.+|..++.|-.+|.|.+||..    .
T Consensus        89 ~~~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvaf---n~dg~~l~~G~~~G~V~v~D~~----~  161 (1206)
T KOG2079|consen   89 AAGVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAF---NQDGSLLLAGLGDGHVTVWDMH----R  161 (1206)
T ss_pred             CcceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEe---cCCCceeccccCCCcEEEEEcc----C
Confidence            344555566677899999999999999876533  333345689999999   8899999999999999999954    3


Q ss_pred             eeEEEEEecCCCCeEEE---EEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         194 IECIHVCRGHERGLETV---TVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l---~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      ...++.+..|..+.+.+   .+..++..++++...|.  +|.+.
T Consensus       162 ~k~l~~i~e~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv  203 (1206)
T KOG2079|consen  162 AKILKVITEHGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV  203 (1206)
T ss_pred             CcceeeeeecCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence            34455555555554444   34445557888887776  56653

>KOG4649|consensus

Probab=97.12  E-value=0.1  Score=42.21  Aligned_cols=101  Identities=9%  Similarity=-0.075  Sum_probs=63.1

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER  205 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  205 (391)
                      ..+++.|+..+.+.--|.....+.-...-...+.+-+..    -+++++.|+..|.+++.+.++..    ....+..- +
T Consensus        23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v----vgdfVV~GCy~g~lYfl~~~tGs----~~w~f~~~-~   93 (354)
T KOG4649|consen   23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV----VGDFVVLGCYSGGLYFLCVKTGS----QIWNFVIL-E   93 (354)
T ss_pred             ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE----ECCEEEEEEccCcEEEEEecchh----heeeeeeh-h
Confidence            346777777777777777433333222223334333322    25579999999999999865332    23333321 1


Q ss_pred             CeE-EEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         206 GLE-TVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       206 ~v~-~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .|. .....+++.++..|+.|++.+..|.++
T Consensus        94 ~vk~~a~~d~~~glIycgshd~~~yalD~~~  124 (354)
T KOG4649|consen   94 TVKVRAQCDFDGGLIYCGSHDGNFYALDPKT  124 (354)
T ss_pred             hhccceEEcCCCceEEEecCCCcEEEecccc
Confidence            222 233567889999999999999999976

>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases

Probab=97.10  E-value=0.23  Score=45.99  Aligned_cols=53  Identities=19%  Similarity=0.204  Sum_probs=37.6

Q ss_pred             CCCeEEEEecccCceeEEEECC---------eeeE--EEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGN---------KSFF--DVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~---------~~i~--~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+|.+.-.|+.+|+.+......         .+..  .+..  .+..|++++.||.++.+|..+++
T Consensus       364 ~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~  427 (488)
T cd00216         364 GKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGK  427 (488)
T ss_pred             CceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCc
Confidence            4677888888888877776544         1111  1222  46788888999999999998876

The alignment model contains an 8-bladed beta-propeller.

>KOG2395|consensus

Probab=97.05  E-value=0.013  Score=52.09  Aligned_cols=117  Identities=16%  Similarity=0.169  Sum_probs=72.5

Q ss_pred             ceeeecCccCcccEEEeccCC--------eEEEEECCCeEEEEecccCc--eeEEEECC-----eeeEEEEECCCCCEEE
Q psy2107         267 PLITLKGHKEAISAVQWTAVD--------EIITSSWDHTLKIWDAELGG--MKSEIVGN-----KSFFDVHYSPLSKLVI  331 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~--------~l~s~~~dg~i~iwd~~~~~--~~~~~~~~-----~~i~~~~~~p~~~~l~  331 (391)
                      .+..++-+.. |..+.+.|+.        .-+.|-.+..|.-||.+-..  .+...+.+     ....|.+-.. ..+++
T Consensus       368 IVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~-sG~Iv  445 (644)
T KOG2395|consen  368 IVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTE-SGYIV  445 (644)
T ss_pred             eeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccccccccceeeecC-CceEE
Confidence            4455554444 5555555432        24566778889999987432  22222222     2455555544 34889


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+.+|.|++||--...   ....+++-..+|..+..+.++..+|+||  +..+.+-++
T Consensus       446 vgS~~GdIRLYdri~~~---AKTAlPgLG~~I~hVdvtadGKwil~Tc--~tyLlLi~t  499 (644)
T KOG2395|consen  446 VGSLKGDIRLYDRIGRR---AKTALPGLGDAIKHVDVTADGKWILATC--KTYLLLIDT  499 (644)
T ss_pred             EeecCCcEEeehhhhhh---hhhcccccCCceeeEEeeccCcEEEEec--ccEEEEEEE
Confidence            99999999999963222   3345777888999999999555544444  456665553

>KOG2395|consensus

Probab=97.04  E-value=0.02  Score=50.93  Aligned_cols=141  Identities=12%  Similarity=0.141  Sum_probs=89.9

Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-------EEEEEeCCCcEEEEECCCCCCCCCCCC
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-------QFATGGWDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-------~l~sg~~dg~i~iwd~~~~~~~~~~~~  244 (391)
                      ++.++.....++-.|++    .++.+....-+.. |.-+.+.|+.+       .-+.|-.|..|.-||.+-..       
T Consensus       348 il~~~~~~~~l~klDIE----~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~-------  415 (644)
T KOG2395|consen  348 ILMDGGEQDKLYKLDIE----RGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQG-------  415 (644)
T ss_pred             EeeCCCCcCcceeeecc----cceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccC-------
Confidence            34445555555555543    3455666665555 77777777543       13456678889999987311       


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCc----cCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-CeeeE
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGH----KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-NKSFF  319 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~i~  319 (391)
                                          ...+....+|    .....|.+-..+|++++||.+|.||+||--.......+++ ..+|.
T Consensus       416 --------------------~~kl~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~  475 (644)
T KOG2395|consen  416 --------------------KNKLAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIK  475 (644)
T ss_pred             --------------------cceeeeeeccccccccccceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCcee
Confidence                                1122222222    2345677767889999999999999999733333333443 34899


Q ss_pred             EEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         320 DVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      .+..+.+|++|++.+ +..+.+.++.
T Consensus       476 hVdvtadGKwil~Tc-~tyLlLi~t~  500 (644)
T KOG2395|consen  476 HVDVTADGKWILATC-KTYLLLIDTL  500 (644)
T ss_pred             eEEeeccCcEEEEec-ccEEEEEEEe
Confidence            999999999988665 6777777754

>KOG2444|consensus

Probab=97.02  E-value=0.0031  Score=49.63  Aligned_cols=105  Identities=15%  Similarity=0.146  Sum_probs=68.8

Q ss_pred             CCEEEEEECCCeEEEEcCC--CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         126 NDWILTGCYDHSVHIWTRR--GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      +..+++|+.+|.|.+|+..  +........-...|.++-  |.-.++.+..+++.||.|+.|++.    ..+.+.....|
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~I--p~~~~~~~~c~~~~dg~ir~~n~~----p~k~~g~~g~h  143 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGI--PNGRDSSLGCVGAQDGRIRACNIK----PNKVLGYVGQH  143 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceecc--ccccccceeEEeccCCceeeeccc----cCceeeeeccc
Confidence            6688999999999999875  222222222333343332  334466689999999999999954    22334444456


Q ss_pred             C-CCeEEEEEcCCCCEEEEE--eCCCcEEEEECCCC
Q psy2107         204 E-RGLETVTVSESRQQFATG--GWDCLLKIWSADIS  236 (391)
Q Consensus       204 ~-~~v~~l~~~~~~~~l~sg--~~dg~i~iwd~~~~  236 (391)
                      . .++..+..+..++.++.+  |.|..++.|++..-
T Consensus       144 ~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~  179 (238)
T KOG2444|consen  144 NFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI  179 (238)
T ss_pred             cCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence            5 566666666667777777  77778888887653

>KOG2444|consensus

Probab=96.93  E-value=0.0043  Score=48.89  Aligned_cols=101  Identities=20%  Similarity=0.270  Sum_probs=64.5

Q ss_pred             CCeEEEEECCCeEEEEecccCceeEE-EE-CCeeeEE-EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc-C
Q psy2107         286 VDEIITSSWDHTLKIWDAELGGMKSE-IV-GNKSFFD-VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK-E  361 (391)
Q Consensus       286 ~~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~i~~-~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~-~  361 (391)
                      +..++.|+.+|.|.+|...-...... +. ....+.+ +.-..++.+..+++.||.|+.|++...+   .+.....|. .
T Consensus        70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k---~~g~~g~h~~~  146 (238)
T KOG2444|consen   70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNK---VLGYVGQHNFE  146 (238)
T ss_pred             CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCc---eeeeeccccCC
Confidence            35689999999999998762211111 11 1123332 2223345688899999999999987655   455555565 4


Q ss_pred             cEEEEEECCCCCCEEEEe--eCCCcEEEEec
Q psy2107         362 WVQSVRWSPIDPQLFVSA--SFDNSVKLWDL  390 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~--~~dg~v~iwdl  390 (391)
                      ++.....+. ...+++++  |.|..++.|++
T Consensus       147 ~~e~~ivv~-sd~~i~~a~~S~d~~~k~W~v  176 (238)
T KOG2444|consen  147 SGEELIVVG-SDEFLKIADTSHDRVLKKWNV  176 (238)
T ss_pred             CcceeEEec-CCceEEeeccccchhhhhcch
Confidence            555555555 44567777  78888888876

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=96.93  E-value=0.27  Score=43.81  Aligned_cols=91  Identities=9%  Similarity=0.060  Sum_probs=57.1

Q ss_pred             EEEEEecCCEEEEEECCCeEEE---EcC--CC----ceEE----eccC-CCCCeeEEEEEec--------CCCCeEEEEE
Q psy2107         119 VSAIDFHNDWILTGCYDHSVHI---WTR--RG----EHKL----NIPG-HGGPVKGVAWLYN--------DGKDAAFISV  176 (391)
Q Consensus       119 V~~~~~~~~~l~t~~~dg~i~i---wd~--~~----~~~~----~~~~-~~~~v~~l~~~~~--------~~~~~~l~s~  176 (391)
                      ..+++.+++.++.+..+..+.+   |+.  .+    ....    .+.. ....|+++.+.|.        .++...++.|
T Consensus         6 ~isls~~~d~laiA~~~r~vil~~~w~~~~~~~~~~~~~~~~~g~l~~~~~e~ITsi~clpl~s~~~s~~~~dw~~I~VG   85 (415)
T PF14655_consen    6 SISLSPDGDLLAIARGQRLVILTSKWDSSRKGENENTYSISWSGPLDDEPGECITSILCLPLSSQKRSTGGPDWTCIAVG   85 (415)
T ss_pred             eEEecCCCCEEEEEcCCEEEEEEeeccccccCCCCCeEEEEeeeeccCCCCCEEEEEEEEEeecccccCCCCCcEEEEEE
Confidence            3345555778877777665555   533  11    1111    1111 1268999999886        2456789999


Q ss_pred             eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC
Q psy2107         177 STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE  214 (391)
Q Consensus       177 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~  214 (391)
                      ..+|.|++|..     .+..+..-.-|..+|..+.+..
T Consensus        86 ~ssG~vrfyte-----~G~LL~~Q~~h~~pV~~ik~~~  118 (415)
T PF14655_consen   86 TSSGYVRFYTE-----NGVLLLSQLLHEEPVLKIKCRS  118 (415)
T ss_pred             ecccEEEEEec-----cchHHHHHhcCccceEEEEecc
Confidence            99999999972     2334444445788888888744

>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []

Probab=96.88  E-value=0.19  Score=41.43  Aligned_cols=205  Identities=11%  Similarity=0.144  Sum_probs=106.6

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEEcCCCCEEEEEeCCCcE
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTVSESRQQFATGGWDCLL  228 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~dg~i  228 (391)
                      .+.+-...+..++|.|.  .+.++++....+.|..++  ..   ++.+..+.-. .+....|++..++.++++--.++.+
T Consensus        16 ~l~g~~~e~SGLTy~pd--~~tLfaV~d~~~~i~els--~~---G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L   88 (248)
T PF06977_consen   16 PLPGILDELSGLTYNPD--TGTLFAVQDEPGEIYELS--LD---GKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRL   88 (248)
T ss_dssp             E-TT--S-EEEEEEETT--TTEEEEEETTTTEEEEEE--TT-----EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEE
T ss_pred             ECCCccCCccccEEcCC--CCeEEEEECCCCEEEEEc--CC---CCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcE
Confidence            45566667999999543  455666777777776555  32   2334433322 4578899998888777766668999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-----cCccCcccEEEecc-CCeEEEEECCCeEEEEe
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-----KGHKEAISAVQWTA-VDEIITSSWDHTLKIWD  302 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd  302 (391)
                      .++++.......                       .......+     ..+...+..++|++ .+.|+.+-...-..+|.
T Consensus        89 ~~~~~~~~~~~~-----------------------~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~  145 (248)
T PF06977_consen   89 YIFTIDDDTTSL-----------------------DRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYE  145 (248)
T ss_dssp             EEEEE----TT-------------------------EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEE
T ss_pred             EEEEEecccccc-----------------------chhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEE
Confidence            999985422110                       00001111     13455688999995 46788887777777777


Q ss_pred             ccc---CceeEEEEC---------CeeeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-c------cCc
Q psy2107         303 AEL---GGMKSEIVG---------NKSFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSS-H------KEW  362 (391)
Q Consensus       303 ~~~---~~~~~~~~~---------~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h------~~~  362 (391)
                      +..   ...+.....         -..+..++++|. +.+++.+..+..|..+|. .++ ..-...+.. .      -..
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~-~G~-~~~~~~L~~g~~gl~~~~~Q  223 (248)
T PF06977_consen  146 VNGFPGGFDLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDR-QGR-VVSSLSLDRGFHGLSKDIPQ  223 (248)
T ss_dssp             EESTT-SS--EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-T-T---EEEEEE-STTGGG-SS---S
T ss_pred             EccccCccceeeccccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECC-CCC-EEEEEEeCCcccCcccccCC
Confidence            654   222222111         125778889887 557777777888999984 333 111122222 1      135


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .-.|+|.+ ++.+++ .+.-+..+++
T Consensus       224 pEGIa~d~-~G~LYI-vsEpNlfy~f  247 (248)
T PF06977_consen  224 PEGIAFDP-DGNLYI-VSEPNLFYRF  247 (248)
T ss_dssp             EEEEEE-T-T--EEE-EETTTEEEEE
T ss_pred             ccEEEECC-CCCEEE-EcCCceEEEe
Confidence            78999999 555444 4455555544

Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.85  E-value=0.21  Score=41.42  Aligned_cols=160  Identities=11%  Similarity=0.121  Sum_probs=97.3

Q ss_pred             ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCccc
Q psy2107         201 RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAIS  279 (391)
Q Consensus       201 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~  279 (391)
                      .+-...+.++.|+|+.+.|++......-.+|=-..+.                             .+.++.- .-....
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~Gd-----------------------------lirtiPL~g~~DpE  132 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGD-----------------------------LIRTIPLTGFSDPE  132 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCc-----------------------------eEEEecccccCChh
Confidence            3445569999999999988887766655555333322                             2222221 012234


Q ss_pred             EEEeccCCeEEEEE-CCCeEEEEecccCceeEE-----EE-----C-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         280 AVQWTAVDEIITSS-WDHTLKIWDAELGGMKSE-----IV-----G-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       280 ~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-----~~-----~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      .+.|..++.++.+. .++.+.++.+........     ++     . +...-.++|.|....|..+-+..-+.||.+...
T Consensus       133 ~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~  212 (316)
T COG3204         133 TIEYIGGNQFVIVDERDRALYLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQS  212 (316)
T ss_pred             HeEEecCCEEEEEehhcceEEEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecC
Confidence            67777666655554 477788777665422211     11     1 347788999999999988888888888876543


Q ss_pred             CcceEEEEecccc-------CcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         348 EGAIVKSTFSSHK-------EWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       348 ~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ...........+.       ..|.++.|++..+.+|+-+..++.+.--|
T Consensus       213 ~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd  261 (316)
T COG3204         213 PSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVD  261 (316)
T ss_pred             CcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEe
Confidence            2111111111121       24778889886777777777776665444

>KOG4441|consensus

Probab=96.83  E-value=0.12  Score=48.64  Aligned_cols=195  Identities=12%  Similarity=0.124  Sum_probs=101.1

Q ss_pred             CCCcEEEEEec-CCEEEEEECC------CeEEEEcCCCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCc---
Q psy2107         115 HDDWVSAIDFH-NDWILTGCYD------HSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQT---  181 (391)
Q Consensus       115 h~~~V~~~~~~-~~~l~t~~~d------g~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~---  181 (391)
                      +...-.+++.. +...++|+.|      .++..||.....=....   ...........     ++.+.+.|+.||.   
T Consensus       321 ~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l-----~g~iYavGG~dg~~~l  395 (571)
T KOG4441|consen  321 SPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL-----DGKLYAVGGFDGEKSL  395 (571)
T ss_pred             cccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE-----CCEEEEEecccccccc
Confidence            33334445554 6788899998      36777887443322222   22222222222     6788999999864   


Q ss_pred             --EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC------cEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107         182 --AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC------LLKIWSADISKERGDPSENGDEGTTSK  253 (391)
Q Consensus       182 --v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg------~i~iwd~~~~~~~~~~~~~~~~~~~~~  253 (391)
                        +-.||  ..+..+..+..............  -+|.+.++||.++      .+..||..+..-..             
T Consensus       396 ~svE~YD--p~~~~W~~va~m~~~r~~~gv~~--~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~-------------  458 (571)
T KOG4441|consen  396 NSVECYD--PVTNKWTPVAPMLTRRSGHGVAV--LGGKLYIIGGGDGSSNCLNSVECYDPETNTWTL-------------  458 (571)
T ss_pred             ccEEEec--CCCCcccccCCCCcceeeeEEEE--ECCEEEEEcCcCCCccccceEEEEcCCCCceee-------------
Confidence              66677  33445554443322222222222  2677788888654      45677776644321             


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCC-----eEEEEecccCceeEEEEC--Ce-eeEEEEECC
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDH-----TLKIWDAELGGMKSEIVG--NK-SFFDVHYSP  325 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~--~~-~i~~~~~~p  325 (391)
                                    +..+....... .++...+...+.|+.|+     +|..||..+.+-...-..  .. .+..+.+  
T Consensus       459 --------------~~~M~~~R~~~-g~a~~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--  521 (571)
T KOG4441|consen  459 --------------IAPMNTRRSGF-GVAVLNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--  521 (571)
T ss_pred             --------------cCCcccccccc-eEEEECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--
Confidence                          11111111111 13434445567777776     367788776654333211  11 2222222  


Q ss_pred             CCCEEEEeeCCC-----cEEEEcCCCCC
Q psy2107         326 LSKLVITASADK-----QIRLYDPKVKE  348 (391)
Q Consensus       326 ~~~~l~~g~~dg-----~i~iwd~~~~~  348 (391)
                      ++...++|+.||     +|..||..+.+
T Consensus       522 ~~~ly~vGG~~~~~~l~~ve~ydp~~d~  549 (571)
T KOG4441|consen  522 GGKLYAVGGFDGNNNLNTVECYDPETDT  549 (571)
T ss_pred             CCEEEEEecccCccccceeEEcCCCCCc
Confidence            366777777775     56677766544

>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]

Probab=96.83  E-value=0.092  Score=47.27  Aligned_cols=164  Identities=12%  Similarity=0.081  Sum_probs=87.7

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeE-EEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA-FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE  214 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~  214 (391)
                      ..+.++++.......+....+.-..-+|   +|+++. +++...||...+|-++........   +..-.+.-+.-.|+|
T Consensus       218 ~~i~~~~l~~g~~~~i~~~~g~~~~P~f---spDG~~l~f~~~rdg~~~iy~~dl~~~~~~~---Lt~~~gi~~~Ps~sp  291 (425)
T COG0823         218 PRIYYLDLNTGKRPVILNFNGNNGAPAF---SPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR---LTNGFGINTSPSWSP  291 (425)
T ss_pred             ceEEEEeccCCccceeeccCCccCCccC---CCCCCEEEEEECCCCCccEEEEcCCCCccee---cccCCccccCccCCC
Confidence            3588888843322222223333445678   566664 455667888888766555544222   322222233667999


Q ss_pred             CCCEEEEEe-CCCcEEEE--ECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EE
Q psy2107         215 SRQQFATGG-WDCLLKIW--SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II  290 (391)
Q Consensus       215 ~~~~l~sg~-~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~  290 (391)
                      +|+.++-.+ ..|.-.||  +.+...                              ...+......-..-.|+|++. ++
T Consensus       292 dG~~ivf~Sdr~G~p~I~~~~~~g~~------------------------------~~riT~~~~~~~~p~~SpdG~~i~  341 (425)
T COG0823         292 DGSKIVFTSDRGGRPQIYLYDLEGSQ------------------------------VTRLTFSGGGNSNPVWSPDGDKIV  341 (425)
T ss_pred             CCCEEEEEeCCCCCcceEEECCCCCc------------------------------eeEeeccCCCCcCccCCCCCCEEE
Confidence            999887654 44554444  443321                              122222222222566776665 44


Q ss_pred             EEEC-CCe--EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC
Q psy2107         291 TSSW-DHT--LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       291 s~~~-dg~--i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                      ..+. +|.  |.+.|+.++...+.+........-.|.|+++.+...+.
T Consensus       342 ~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~  389 (425)
T COG0823         342 FESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSG  389 (425)
T ss_pred             EEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEecc
Confidence            4433 454  66667766654445544444455677888887665443

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.74  E-value=0.006  Score=35.39  Aligned_cols=33  Identities=12%  Similarity=0.189  Sum_probs=29.1

Q ss_pred             ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         313 VGNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       313 ~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      .....|.+++|+|...+||.|+.+|.|.+|.+.
T Consensus         9 ~l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen    9 NLPSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCCCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            344578999999999999999999999999873

>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase

Probab=96.74  E-value=0.29  Score=41.48  Aligned_cols=155  Identities=8%  Similarity=0.040  Sum_probs=90.6

Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      .++.|+.|+.+| +.++++..   ........  +...|..+...|+-+.+++-+ |+.+.++++..-..........  
T Consensus         6 ~~~~L~vGt~~G-l~~~~~~~---~~~~~~i~--~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~--   76 (275)
T PF00780_consen    6 WGDRLLVGTEDG-LYVYDLSD---PSKPTRIL--KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLA--   76 (275)
T ss_pred             CCCEEEEEECCC-EEEEEecC---CccceeEe--ecceEEEEEEecccCEEEEEc-CCccEEEEchhhcccccccccc--
Confidence            466788898888 88888621   11222222  233499999999877776665 4999999997633321000000  


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEE---eccCCeEEEEECCCeEEEEecccC-----ceeEEEECCeeeEE
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ---WTAVDEIITSSWDHTLKIWDAELG-----GMKSEIVGNKSFFD  320 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~~~i~~  320 (391)
                        .           ...............+...+   -..+...+......+|.+|.....     +..+.+..+..+..
T Consensus        77 --~-----------~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~  143 (275)
T PF00780_consen   77 --F-----------PKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLPDPPSS  143 (275)
T ss_pred             --c-----------cccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcCCCcEE
Confidence              0           00000000001122333333   112334555555668888877653     56677888889999


Q ss_pred             EEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         321 VHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      ++|.  ++.++.|..+ ...+.|+.++.
T Consensus       144 i~~~--~~~i~v~~~~-~f~~idl~~~~  168 (275)
T PF00780_consen  144 IAFL--GNKICVGTSK-GFYLIDLNTGS  168 (275)
T ss_pred             EEEe--CCEEEEEeCC-ceEEEecCCCC
Confidence            9998  6778887744 47788988654

These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=96.71  E-value=0.33  Score=41.61  Aligned_cols=212  Identities=9%  Similarity=0.057  Sum_probs=111.8

Q ss_pred             EEEecCCEEEEEE--CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEE-
Q psy2107         121 AIDFHNDWILTGC--YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECI-  197 (391)
Q Consensus       121 ~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-  197 (391)
                      .+.-++++++..-  --.+|.|-|+..++......-.+   |.-..|..+  .-|.+-|.||++.-..++......... 
T Consensus       101 ~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PG---C~~iyP~~~--~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t  175 (342)
T PF06433_consen  101 ALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPG---CWLIYPSGN--RGFSMLCGDGSLLTVTLDADGKEAQKST  175 (342)
T ss_dssp             EE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTS---EEEEEEEET--TEEEEEETTSCEEEEEETSTSSEEEEEE
T ss_pred             EEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCC---EEEEEecCC--CceEEEecCCceEEEEECCCCCEeEeec
Confidence            3333455444432  23456666665554443332333   333345322  347888999999999887444332211 


Q ss_pred             EEEecCCCCe-EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107         198 HVCRGHERGL-ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE  276 (391)
Q Consensus       198 ~~~~~~~~~v-~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (391)
                      ..|.....++ ..-++...+..++--+.+|.|+--|+.........             ...........  ..+  ..+
T Consensus       176 ~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~-------------~~~~~t~~e~~--~~W--rPG  238 (342)
T PF06433_consen  176 KVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGK-------------PWSLLTDAEKA--DGW--RPG  238 (342)
T ss_dssp             EESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEE-------------EEESS-HHHHH--TTE--EE-
T ss_pred             cccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccC-------------cccccCccccc--cCc--CCc
Confidence            1121222222 23334445555666788899988888653321000             00000000000  000  012


Q ss_pred             cccEEEec-cCCeEEEEEC---CC-------eEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEe-eCCCcEEEEc
Q psy2107         277 AISAVQWT-AVDEIITSSW---DH-------TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITA-SADKQIRLYD  343 (391)
Q Consensus       277 ~v~~~~~~-~~~~l~s~~~---dg-------~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g-~~dg~i~iwd  343 (391)
                      .-.-++++ +.++|+..-.   ++       .|.++|+.+++.+..+....++.++..+.+.+ +|++. ..++.+.+||
T Consensus       239 G~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D  318 (342)
T PF06433_consen  239 GWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYD  318 (342)
T ss_dssp             SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEE
T ss_pred             ceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEe
Confidence            23456666 4556554321   11       48888999999999999888899999998866 66544 4578999999


Q ss_pred             CCCCCcceEEEEec
Q psy2107         344 PKVKEGAIVKSTFS  357 (391)
Q Consensus       344 ~~~~~~~~~~~~~~  357 (391)
                      ..+++   .++...
T Consensus       319 ~~tGk---~~~~~~  329 (342)
T PF06433_consen  319 AATGK---LVRSIE  329 (342)
T ss_dssp             TTT-----EEEEE-
T ss_pred             CcCCc---EEeehh
Confidence            99876   555443

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain

Probab=96.61  E-value=0.01  Score=34.40  Aligned_cols=31  Identities=10%  Similarity=0.109  Sum_probs=28.5

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      ...|.+++|+|...+||.|+.+|.|.++.++
T Consensus        11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~   41 (47)
T PF12894_consen   11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLN   41 (47)
T ss_pred             CCcEEEEEECCCCCEEEEEECCCeEEEEECC
Confidence            4579999999999999999999999999983

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.54  E-value=0.54  Score=42.02  Aligned_cols=191  Identities=14%  Similarity=0.108  Sum_probs=114.5

Q ss_pred             eEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECC
Q psy2107         159 KGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW---DCLLKIWSAD  234 (391)
Q Consensus       159 ~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~  234 (391)
                      ..++.   ++.+. ..+....++.|.+.|..    .......... ......++++++++.+..+..   ++.+.+.|..
T Consensus        77 ~~i~v---~~~~~~vyv~~~~~~~v~vid~~----~~~~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~  148 (381)
T COG3391          77 AGVAV---NPAGNKVYVTTGDSNTVSVIDTA----TNTVLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAA  148 (381)
T ss_pred             cceee---CCCCCeEEEecCCCCeEEEEcCc----ccceeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCC
Confidence            34555   44455 55555567899999833    2222222221 226678999999988777665   5777777776


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCceeE--
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGMKS--  310 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~~~--  310 (391)
                      +.+                             .......-..+ ..+++.|++. ++.+ ..++.|.+.|........  
T Consensus       149 t~~-----------------------------~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~  198 (381)
T COG3391         149 TNK-----------------------------VTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGS  198 (381)
T ss_pred             CCe-----------------------------EEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccc
Confidence            533                             33333322233 7888887665 4444 468999999977665553  


Q ss_pred             ---EEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEE-eccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         311 ---EIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       311 ---~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                         ..........+.++|+|.++.+....   +.+...|..+..   .... ...-......+..+|++....+.-+..+
T Consensus       199 ~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~---v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~  275 (381)
T COG3391         199 VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN---VTATDLPVGSGAPRGVAVDPAGKAAYVANSQGG  275 (381)
T ss_pred             cccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce---EEEeccccccCCCCceeECCCCCEEEEEecCCC
Confidence               12223345678999999966655433   588888877654   3222 1111114567888996655444434456


Q ss_pred             cEEEEec
Q psy2107         384 SVKLWDL  390 (391)
Q Consensus       384 ~v~iwdl  390 (391)
                      .+.+-|.
T Consensus       276 ~V~vid~  282 (381)
T COG3391         276 TVSVIDG  282 (381)
T ss_pred             eEEEEeC
Confidence            6666553

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=96.48  E-value=0.56  Score=41.46  Aligned_cols=236  Identities=14%  Similarity=0.133  Sum_probs=117.8

Q ss_pred             CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-------C----
Q psy2107         135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-------H----  203 (391)
Q Consensus       135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~----  203 (391)
                      .+.+.|||++......+......+....|   +|+++.++... ++.|.+++..  .+. ....+..+       -    
T Consensus        22 ~~~y~i~d~~~~~~~~l~~~~~~~~~~~~---sP~g~~~~~v~-~~nly~~~~~--~~~-~~~lT~dg~~~i~nG~~dwv   94 (353)
T PF00930_consen   22 KGDYYIYDIETGEITPLTPPPPKLQDAKW---SPDGKYIAFVR-DNNLYLRDLA--TGQ-ETQLTTDGEPGIYNGVPDWV   94 (353)
T ss_dssp             EEEEEEEETTTTEEEESS-EETTBSEEEE----SSSTEEEEEE-TTEEEEESST--TSE-EEESES--TTTEEESB--HH
T ss_pred             ceeEEEEecCCCceEECcCCcccccccee---ecCCCeeEEEe-cCceEEEECC--CCC-eEEeccccceeEEcCcccee
Confidence            46789999988877777665778899999   66788888775 5788888743  221 11111122       0    


Q ss_pred             -----CCCeEEEEEcCCCCEEEEEeCC-CcEEEEECCCCCCCC---------CCCCCCCCCccccccccccccCCCCCc-
Q psy2107         204 -----ERGLETVTVSESRQQFATGGWD-CLLKIWSADISKERG---------DPSENGDEGTTSKKRKKEYSSASSRTP-  267 (391)
Q Consensus       204 -----~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~-  267 (391)
                           -+.-..+-|+|++++|+....| ..+..+.+-......         ..+..+...  ...... ..+....+. 
T Consensus        95 yeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~n--p~v~l~-v~~~~~~~~~  171 (353)
T PF00930_consen   95 YEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPN--PRVSLF-VVDLASGKTT  171 (353)
T ss_dssp             HHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS-----EEEEE-EEESSSTCCC
T ss_pred             ccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcC--CceEEE-EEECCCCcEE
Confidence                 1223578899999999877543 445444432111100         001111111  000000 111111111 


Q ss_pred             -eeee---cCccCcccEEEeccCCe-EEEEE--CC---CeEEEEecccCceeEEEE--CCee---eEEEEEC-CCCC-EE
Q psy2107         268 -LITL---KGHKEAISAVQWTAVDE-IITSS--WD---HTLKIWDAELGGMKSEIV--GNKS---FFDVHYS-PLSK-LV  330 (391)
Q Consensus       268 -~~~~---~~~~~~v~~~~~~~~~~-l~s~~--~d---g~i~iwd~~~~~~~~~~~--~~~~---i~~~~~~-p~~~-~l  330 (391)
                       +...   ......+..+.|.+++. ++..-  .+   ..+.++|..++.......  ....   .....+. +++. ++
T Consensus       172 ~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l  251 (353)
T PF00930_consen  172 ELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFL  251 (353)
T ss_dssp             EE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEE
T ss_pred             EeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEE
Confidence             1111   23355678899986665 54442  22   246677887766543332  2221   1234443 5554 55


Q ss_pred             EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeCC
Q psy2107         331 ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASFD  382 (391)
Q Consensus       331 ~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d  382 (391)
                      .....+|.-+||-+.....  ....+....-.|+. +.|+++++.++.++..+
T Consensus       252 ~~s~~~G~~hly~~~~~~~--~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~  302 (353)
T PF00930_consen  252 WISERDGYRHLYLYDLDGG--KPRQLTSGDWEVTSILGWDEDNNRIYFTANGD  302 (353)
T ss_dssp             EEEETTSSEEEEEEETTSS--EEEESS-SSS-EEEEEEEECTSSEEEEEESSG
T ss_pred             EEEEcCCCcEEEEEccccc--ceeccccCceeecccceEcCCCCEEEEEecCC
Confidence            5555677555544333221  13355545556755 67788666666666653

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.44  E-value=0.86  Score=43.15  Aligned_cols=185  Identities=13%  Similarity=0.146  Sum_probs=93.5

Q ss_pred             cEEEEEec--CCEEEEEE------CCC--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc-EEEEe
Q psy2107         118 WVSAIDFH--NDWILTGC------YDH--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT-AMIWE  186 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~------~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~-v~iwd  186 (391)
                      .+...+.+  |+.++...      .|+  .|.+++..+.......+  .....-.|   ++++..+++...... +++.+
T Consensus       351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~g--~~~t~PsW---spDG~~lw~v~dg~~~~~v~~  425 (591)
T PRK13616        351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLEG--HSLTRPSW---SLDADAVWVVVDGNTVVRVIR  425 (591)
T ss_pred             CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeecC--CCCCCceE---CCCCCceEEEecCcceEEEec
Confidence            45565665  55554443      233  55555654433222222  23778888   667776666543212 22221


Q ss_pred             ---------ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC---CCCCCCCCCCCCCCCCccccc
Q psy2107         187 ---------WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA---DISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       187 ---------~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~---~~~~~~~~~~~~~~~~~~~~~  254 (391)
                               +.........     ...+.|..+.|+|||..++... +|.|.+=-+   ..+...               
T Consensus       426 ~~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~---------------  484 (591)
T PRK13616        426 DPATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYA---------------  484 (591)
T ss_pred             cCCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCcee---------------
Confidence                     1111111110     2245799999999999888765 467766322   221100               


Q ss_pred             cccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEeccc-CceeEEEEC---CeeeEEEEECCCCCEE
Q psy2107         255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL-GGMKSEIVG---NKSFFDVHYSPLSKLV  330 (391)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~---~~~i~~~~~~p~~~~l  330 (391)
                               -..+......-...+..+.|.+++.|+.+..++...+|.+.- |.....+..   ..++..++-++.  .+
T Consensus       485 ---------l~~~~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~v~~vaa~~~--~i  553 (591)
T PRK13616        485 ---------LTNPREVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSDALPSRNLSAPVVAVAASPS--TV  553 (591)
T ss_pred             ---------ecccEEeecccCCccccceEecCCEEEEEecCCCCceEEEecCCccccccCCCCccCceEEEecCCc--eE
Confidence                     011111112233446789999888877777666555665542 222222122   235666666652  34


Q ss_pred             EEeeCCCcE
Q psy2107         331 ITASADKQI  339 (391)
Q Consensus       331 ~~g~~dg~i  339 (391)
                      +....++.+
T Consensus       554 yv~~~~g~~  562 (591)
T PRK13616        554 YVTDARAVL  562 (591)
T ss_pred             EEEcCCceE
Confidence            444556633

>PHA03098 kelch-like protein; Provisional

Probab=96.43  E-value=0.5  Score=44.51  Aligned_cols=107  Identities=10%  Similarity=0.074  Sum_probs=54.3

Q ss_pred             EEEecCCEEEEEECCC------eEEEEcCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEe
Q psy2107         121 AIDFHNDWILTGCYDH------SVHIWTRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWE  186 (391)
Q Consensus       121 ~~~~~~~~l~t~~~dg------~i~iwd~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd  186 (391)
                      ++...+..++.|+.++      .+..||.....-..+...   ......+..     ++.+++.|+.++     .+..||
T Consensus       290 ~~~~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~-----~~~lyv~GG~~~~~~~~~v~~yd  364 (534)
T PHA03098        290 SVVLNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF-----NNRIYVIGGIYNSISLNTVESWK  364 (534)
T ss_pred             EEEECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE-----CCEEEEEeCCCCCEecceEEEEc
Confidence            3444566777777543      567788754443433321   122223333     567777787653     455666


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD------CLLKIWSADIS  236 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~  236 (391)
                      .  .++.+.....+....... +++. -++++.+.||.+      +.+..||..+.
T Consensus       365 ~--~~~~W~~~~~lp~~r~~~-~~~~-~~~~iYv~GG~~~~~~~~~~v~~yd~~t~  416 (534)
T PHA03098        365 P--GESKWREEPPLIFPRYNP-CVVN-VNNLIYVIGGISKNDELLKTVECFSLNTN  416 (534)
T ss_pred             C--CCCceeeCCCcCcCCccc-eEEE-ECCEEEEECCcCCCCcccceEEEEeCCCC
Confidence            3  344555433332212111 1222 256667777632      34777887653

>PRK13616 lipoprotein LpqB; Provisional

Probab=96.41  E-value=0.35  Score=45.69  Aligned_cols=172  Identities=13%  Similarity=0.150  Sum_probs=89.9

Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe------CCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG------WDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      +|.+.-.+    ......+.-..+....+.+.+++|+|+.++...      .|+.-.+|=...+..              
T Consensus       328 ~G~l~~~~----~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~--------------  389 (591)
T PRK13616        328 DGSLVSVD----GQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGV--------------  389 (591)
T ss_pred             CCeEEEec----CCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCc--------------
Confidence            66665543    222223322223334678999999999887655      243334443322111              


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEEC------------CCeEEEEecccCceeEEEECCeeeE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSW------------DHTLKIWDAELGGMKSEIVGNKSFF  319 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~~i~  319 (391)
                                    ......+  ...+.-.|+++ +.+++.+.            .+.+.+.++..+....  .....|.
T Consensus       390 --------------~~~lt~g--~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Is  451 (591)
T PRK13616        390 --------------AVQVLEG--HSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPIS  451 (591)
T ss_pred             --------------ceeeecC--CCCCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcC
Confidence                          1111122  23666778865 44444432            2334444554443332  3345799


Q ss_pred             EEEECCCCCEEEEeeCCCcEEE---EcCCCCCcceEE--EEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         320 DVHYSPLSKLVITASADKQIRL---YDPKVKEGAIVK--STF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~dg~i~i---wd~~~~~~~~~~--~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+.|||||..++... ++.|++   -....+. ..+.  ..+ .+-...+.++.|.+ ++.+ +.+..++...+|.+
T Consensus       452 sl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~-~~l~~~~~l~~~l~~~~~~l~W~~-~~~L-~V~~~~~~~~v~~v  524 (591)
T PRK13616        452 ELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ-YALTNPREVGPGLGDTAVSLDWRT-GDSL-VVGRSDPEHPVWYV  524 (591)
T ss_pred             eEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc-eeecccEEeecccCCccccceEec-CCEE-EEEecCCCCceEEE
Confidence            999999999888765 577777   3322222 1110  112 22333468899998 5444 45555555556643

>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3

Probab=96.40  E-value=0.12  Score=40.88  Aligned_cols=105  Identities=17%  Similarity=0.304  Sum_probs=69.2

Q ss_pred             cCCeEEEEECCCeEEEEecc--cCceeEEEECCeeeEEEEECCCCCEEEEeeCC---C---cEEEE---cCCCCCcceEE
Q psy2107         285 AVDEIITSSWDHTLKIWDAE--LGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---K---QIRLY---DPKVKEGAIVK  353 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g---~i~iw---d~~~~~~~~~~  353 (391)
                      +.+.|+.+...+.|.+|++.  ..+.+.++..-+.|..+.++..|+||++-=.+   .   .+|+|   ...........
T Consensus        27 g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~  106 (215)
T PF14761_consen   27 GPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR  106 (215)
T ss_pred             CCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEE
Confidence            33556555778889999988  45667788888899999999999999986322   2   45664   32211111122


Q ss_pred             EEeccc---------------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         354 STFSSH---------------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       354 ~~~~~h---------------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..+.||                     +.++.+++..|..|++++.+  ++++.+|.++
T Consensus       107 vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~--~~~l~lf~l~  163 (215)
T PF14761_consen  107 VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC--GNKLVLFTLK  163 (215)
T ss_pred             EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc--CCEEEEEEEE
Confidence            122222                     34688999999888865543  4688888763

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=96.39  E-value=0.014  Score=32.70  Aligned_cols=31  Identities=26%  Similarity=0.338  Sum_probs=26.3

Q ss_pred             CcEEEEEECCCCC--CEEEEeeCCCcEEEEecC
Q psy2107         361 EWVQSVRWSPIDP--QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       361 ~~v~~~~~~~~~~--~~l~s~~~dg~v~iwdlr  391 (391)
                      +.|.++.|+|...  .+|+-+-.-|.|.|+|+|
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R   33 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR   33 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence            3589999998555  688888889999999987

It contains a characteristic DLL sequence motif.

>COG3391 Uncharacterized conserved protein [Function unknown]

Probab=96.28  E-value=0.78  Score=41.03  Aligned_cols=195  Identities=10%  Similarity=0.044  Sum_probs=116.7

Q ss_pred             EEEec--CC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCce
Q psy2107         121 AIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSI  194 (391)
Q Consensus       121 ~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~  194 (391)
                      .++.+  +. .+++...++.|.+.|...........-...-..+++   ++++..+..+..   ++++.+.|  ..+.  
T Consensus        78 ~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~---~~~~~~vYV~n~~~~~~~vsvid--~~t~--  150 (381)
T COG3391          78 GVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAV---DPDGKYVYVANAGNGNNTVSVID--AATN--  150 (381)
T ss_pred             ceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEE---CCCCCEEEEEecccCCceEEEEe--CCCC--
Confidence            34444  44 556666678999999754444433323335667888   666765555544   57777776  3332  


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      ........-..+ ..+++.|+++.++... .++.|.+.|........ .                       ....... 
T Consensus       151 ~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~-~-----------------------~~~~~~~-  204 (381)
T COG3391         151 KVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVR-G-----------------------SVGSLVG-  204 (381)
T ss_pred             eEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceec-c-----------------------ccccccc-
Confidence            333333332334 8899999999666554 78899999976533210 0                       0000011 


Q ss_pred             ccCcccEEEeccCCe-EEEEEC---CCeEEEEecccCceeEE-EECCe-eeEEEEECCCCCEEEEeeC-CCcEEEEcCCC
Q psy2107         274 HKEAISAVQWTAVDE-IITSSW---DHTLKIWDAELGGMKSE-IVGNK-SFFDVHYSPLSKLVITASA-DKQIRLYDPKV  346 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~-l~s~~~---dg~i~iwd~~~~~~~~~-~~~~~-~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~  346 (391)
                      -...-..+.+.+++. ++....   ++.+...|..++..... ..... ....+..+|+|+++.+... .+.+.+.|..+
T Consensus       205 ~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~  284 (381)
T COG3391         205 VGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGAT  284 (381)
T ss_pred             cCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCC
Confidence            112234566775554 444332   25899999988877665 33223 4567899999998887744 48899988766


Q ss_pred             CC
Q psy2107         347 KE  348 (391)
Q Consensus       347 ~~  348 (391)
                      ..
T Consensus       285 ~~  286 (381)
T COG3391         285 DR  286 (381)
T ss_pred             Cc
Confidence            44

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=96.07  E-value=0.57  Score=40.21  Aligned_cols=143  Identities=14%  Similarity=0.144  Sum_probs=81.8

Q ss_pred             EEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCe
Q psy2107         211 TVSESRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDE  288 (391)
Q Consensus       211 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~  288 (391)
                      .|.++.. ++.+--..+.|.-|+..+++.                              ..+. +.+.+.++... ..+.
T Consensus        31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~~------------------------------~~~~-~p~~~~~~~~~d~~g~   79 (307)
T COG3386          31 VWDPDRGALLWVDILGGRIHRLDPETGKK------------------------------RVFP-SPGGFSSGALIDAGGR   79 (307)
T ss_pred             cCcCCCCEEEEEeCCCCeEEEecCCcCce------------------------------EEEE-CCCCcccceeecCCCe
Confidence            4666665 445555677888888764322                              1222 22333444433 5555


Q ss_pred             EEEEECCCeEEEEecccCceeEEEEC------CeeeEEEEECCCCCEEEEeeC-----------CCcEEEEcCCCCCcce
Q psy2107         289 IITSSWDHTLKIWDAELGGMKSEIVG------NKSFFDVHYSPLSKLVITASA-----------DKQIRLYDPKVKEGAI  351 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~i~~~~~~p~~~~l~~g~~-----------dg~i~iwd~~~~~~~~  351 (391)
                      |+++..  -+.+++..++.....+..      ....+.+...|+|.+.++...           -|.++.+|. .+.   
T Consensus        80 Lv~~~~--g~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~---  153 (307)
T COG3386          80 LIACEH--GVRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGG---  153 (307)
T ss_pred             EEEEcc--ccEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCC---
Confidence            665543  345566655555333221      124667888999987776443           134555554 222   


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....+..+-..-+.|+|||++..++++=+..+.|.-|++
T Consensus       154 ~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~  192 (307)
T COG3386         154 VVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDL  192 (307)
T ss_pred             EEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEec
Confidence            444555556667999999966666666666677777764

>KOG1916|consensus

Probab=96.06  E-value=0.0065  Score=57.33  Aligned_cols=115  Identities=12%  Similarity=0.055  Sum_probs=76.5

Q ss_pred             cCCCCcEEEEEec-CC--EEEEEECCCeEEEEcC---CCceE-----EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         113 ILHDDWVSAIDFH-ND--WILTGCYDHSVHIWTR---RGEHK-----LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       113 ~~h~~~V~~~~~~-~~--~l~t~~~dg~i~iwd~---~~~~~-----~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      .+..+.|-.++|- .+  .++  -.-|.+.||++   .|+..     .........+.-|.|.|.-.+..++..+-.+++
T Consensus       129 kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~  206 (1283)
T KOG1916|consen  129 KGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGE  206 (1283)
T ss_pred             hcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCc
Confidence            4566677777774 11  111  33377889987   34322     222344566678888887777778888888999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEE-----------EcCCCCEEEEEeCCCcEEEEECC
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVT-----------VSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~-----------~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      +++..++....     ..+.+|...+..++           .+|||..++.++.||.++.|.+-
T Consensus       207 i~lL~~~ra~~-----~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiy  265 (1283)
T KOG1916|consen  207 IRLLNINRALR-----SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIY  265 (1283)
T ss_pred             eeEeeechHHH-----HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeee
Confidence            99887642211     33445766655554           58999999999999999998864

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=96.04  E-value=0.46  Score=44.67  Aligned_cols=118  Identities=13%  Similarity=0.146  Sum_probs=73.6

Q ss_pred             EEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc
Q psy2107         198 HVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA  277 (391)
Q Consensus       198 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (391)
                      ..+.......+-+.-+.-++.-++-+....+.|||.+.+...                           ....+ ...+.
T Consensus        23 ~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE---------------------------~~~~f-~~~~~   74 (631)
T PF12234_consen   23 STFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLE---------------------------YEESF-SEDDP   74 (631)
T ss_pred             EEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEE---------------------------Eeeee-cCCCc
Confidence            333333444555555555554444444567999999764321                           11222 45778


Q ss_pred             ccEEEec--cCC-eEEEEECCCeEEEEecc---------cCceeEEEE----CCeeeEEEEECCCCCEEEEeeCCCcEEE
Q psy2107         278 ISAVQWT--AVD-EIITSSWDHTLKIWDAE---------LGGMKSEIV----GNKSFFDVHYSPLSKLVITASADKQIRL  341 (391)
Q Consensus       278 v~~~~~~--~~~-~l~s~~~dg~i~iwd~~---------~~~~~~~~~----~~~~i~~~~~~p~~~~l~~g~~dg~i~i  341 (391)
                      |..+.|.  |++ .+++.+..+.|.+|.-.         ....+..+.    ...+|.+..|.++|.+++++  ++.+.|
T Consensus        75 I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~s--GNqlfv  152 (631)
T PF12234_consen   75 IRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGS--GNQLFV  152 (631)
T ss_pred             eeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEe--CCEEEE
Confidence            9999998  444 48888999999998642         112333332    23478899999988777654  567888


Q ss_pred             EcCC
Q psy2107         342 YDPK  345 (391)
Q Consensus       342 wd~~  345 (391)
                      +|-.
T Consensus       153 ~dk~  156 (631)
T PF12234_consen  153 FDKW  156 (631)
T ss_pred             ECCC
Confidence            8743

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF14727 PHTB1_N: PTHB1 N-terminus

Probab=95.98  E-value=1.1  Score=40.13  Aligned_cols=148  Identities=15%  Similarity=0.149  Sum_probs=86.0

Q ss_pred             CCEEEEEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEec-CCCCeEEEEEeCCCcEEEEeecCCCCc-----e
Q psy2107         126 NDWILTGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYN-DGKDAAFISVSTDQTAMIWEWKVESNS-----I  194 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~-~~~~~~l~s~~~dg~v~iwd~~~~~~~-----~  194 (391)
                      .+.+++|+..|.++||+....     .+.-...-..+|..+..-+. +......++.-.-..+.+|.+....+.     .
T Consensus        37 ~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~~  116 (418)
T PF14727_consen   37 SDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGNQ  116 (418)
T ss_pred             ccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCcE
Confidence            359999999999999998321     12222345678888887543 222333444466788888887433322     1


Q ss_pred             eEEEEEecCC--CCeEEEEEcC----C-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         195 ECIHVCRGHE--RGLETVTVSE----S-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       195 ~~~~~~~~~~--~~v~~l~~~~----~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      -.+.....|.  .....+++-|    . ..+|.+-+.||.+.+++-+.-.                             .
T Consensus       117 ~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~-----------------------------f  167 (418)
T PF14727_consen  117 YQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFA-----------------------------F  167 (418)
T ss_pred             EEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEE-----------------------------E
Confidence            2222222332  2233333333    2 3678889999999999976411                             1


Q ss_pred             eeeecCccCcccEEEec-cCCeEEEEECCCeEEEEec
Q psy2107         268 LITLKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDA  303 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~  303 (391)
                      ...+.. ---...+.|. ..+.|++++.+..+..|..
T Consensus       168 ~~~lp~-~llPgPl~Y~~~tDsfvt~sss~~l~~Yky  203 (418)
T PF14727_consen  168 SRFLPD-FLLPGPLCYCPRTDSFVTASSSWTLECYKY  203 (418)
T ss_pred             EEEcCC-CCCCcCeEEeecCCEEEEecCceeEEEecH
Confidence            111111 1122345666 3456888888888888864

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=95.98  E-value=0.28  Score=44.75  Aligned_cols=114  Identities=11%  Similarity=0.214  Sum_probs=76.4

Q ss_pred             ccCcccEEEeccCC-----eEEEEECCCeEEEEecc-----cCceeEEEEC----Cee--eEEEEECCCCCEEEEeeCCC
Q psy2107         274 HKEAISAVQWTAVD-----EIITSSWDHTLKIWDAE-----LGGMKSEIVG----NKS--FFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       274 ~~~~v~~~~~~~~~-----~l~s~~~dg~i~iwd~~-----~~~~~~~~~~----~~~--i~~~~~~p~~~~l~~g~~dg  337 (391)
                      .-..|..+.|.|.+     .+++......|.+|-+.     ..+.+....+    .-+  ...+.|+|....|++-....
T Consensus        55 qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~d  134 (671)
T PF15390_consen   55 QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARD  134 (671)
T ss_pred             ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCc
Confidence            33457889998542     48888899999999875     2233222221    112  24688999988887766555


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .--+++++... ..+...+ .-.+.|.|.+|.+||.+++++.|..=.-+|||
T Consensus       135 vSV~~sV~~d~-srVkaDi-~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd  184 (671)
T PF15390_consen  135 VSVLPSVHCDS-SRVKADI-KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD  184 (671)
T ss_pred             eeEeeeeeeCC-ceEEEec-cCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence            44466665543 2244444 35577999999998888888887776788897

>KOG2280|consensus

Probab=95.94  E-value=1.4  Score=41.65  Aligned_cols=49  Identities=22%  Similarity=0.380  Sum_probs=38.6

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      -.|+|++..|..+..+.-..+.+-.+.|   +. ...|+....+|++.+|++-
T Consensus        64 ~~I~If~~sG~lL~~~~w~~~~lI~mgW---s~-~eeLI~v~k~g~v~Vy~~~  112 (829)
T KOG2280|consen   64 PYIRIFNISGQLLGRILWKHGELIGMGW---SD-DEELICVQKDGTVHVYGLL  112 (829)
T ss_pred             eeEEEEeccccchHHHHhcCCCeeeecc---cC-CceEEEEeccceEEEeecc
Confidence            4699999999888876655558889999   54 4457778999999999964

>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length

Probab=95.92  E-value=0.19  Score=47.07  Aligned_cols=106  Identities=10%  Similarity=0.172  Sum_probs=70.7

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee-----cCCCCceeEEE
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW-----KVESNSIECIH  198 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~-----~~~~~~~~~~~  198 (391)
                      ++..++-+....+.|||..+..+..-.  ...+.|.++.|.. .++++.+++.+....|.++--     ......+..+.
T Consensus        41 ~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWts-t~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~  119 (631)
T PF12234_consen   41 KKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTS-TPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR  119 (631)
T ss_pred             CcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeee-cCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence            444444455568999999655443222  4578999999988 578889999999999999841     11122233333


Q ss_pred             EE--ecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         199 VC--RGHE-RGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       199 ~~--~~~~-~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      .+  ..|+ .+|.+..|.++|.+++.+|  +.+.|+|-.
T Consensus       120 ~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~  156 (631)
T PF12234_consen  120 KIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW  156 (631)
T ss_pred             EEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence            33  3444 6899999999997555443  578888753

This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.

>PF15390 DUF4613: Domain of unknown function (DUF4613)

Probab=95.87  E-value=0.73  Score=42.23  Aligned_cols=151  Identities=11%  Similarity=0.161  Sum_probs=85.0

Q ss_pred             CCeeEEEEEecCCCCe-EEEEEe--CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC----CCEEEEEeCCCcE
Q psy2107         156 GPVKGVAWLYNDGKDA-AFISVS--TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES----RQQFATGGWDCLL  228 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~-~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~~l~sg~~dg~i  228 (391)
                      .++..++|   . ||+ .+++.-  .+|.+++=|       ...+.    .-..|..+.|.|-    ...+++.-....|
T Consensus        20 HPvhGlaW---T-DGkqVvLT~L~l~~gE~kfGd-------s~viG----qFEhV~GlsW~P~~~~~~paLLAVQHkkhV   84 (671)
T PF15390_consen   20 HPVHGLAW---T-DGKQVVLTDLQLHNGEPKFGD-------SKVIG----QFEHVHGLSWAPPCTADTPALLAVQHKKHV   84 (671)
T ss_pred             ccccceEe---c-CCCEEEEEeeeeeCCccccCC-------ccEee----ccceeeeeeecCcccCCCCceEEEeccceE
Confidence            46888999   3 444 334332  234444332       12222    3346889999984    3345666677899


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-c----CcccEEEeccCCeEEEEECCCeE-EEEe
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-K----EAISAVQWTAVDEIITSSWDHTL-KIWD  302 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~l~s~~~dg~i-~iwd  302 (391)
                      .+|.+......                        ..+.+..-..+ .    ---....|+|..-+++.-....+ .+++
T Consensus        85 tVWqL~~s~~e------------------------~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~s  140 (671)
T PF15390_consen   85 TVWQLCPSTTE------------------------RNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPS  140 (671)
T ss_pred             EEEEeccCccc------------------------cccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeee
Confidence            99998632211                        01111111111 0    11235678887665554333333 3445


Q ss_pred             cc--cCceeEEEECCeeeEEEEECCCCCEEEEeeC-CCcEEEEcCC
Q psy2107         303 AE--LGGMKSEIVGNKSFFDVHYSPLSKLVITASA-DKQIRLYDPK  345 (391)
Q Consensus       303 ~~--~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~  345 (391)
                      ++  +......++..+-|.|.+|.+||+.|+++-. .=.-++||-.
T Consensus       141 V~~d~srVkaDi~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd~~  186 (671)
T PF15390_consen  141 VHCDSSRVKADIKTSGLIHCACWTKDGQRLVVAVGSSLHSYIWDSA  186 (671)
T ss_pred             eeeCCceEEEeccCCceEEEEEecCcCCEEEEEeCCeEEEEEecCc
Confidence            44  3445566777889999999999997776532 3356788853

>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []

Probab=95.86  E-value=0.74  Score=43.84  Aligned_cols=158  Identities=8%  Similarity=0.111  Sum_probs=94.2

Q ss_pred             CCcEEEEEecCCEEEEEECCCeEEEEcCCCceE-------Eecc----------------CCCCCeeEEEEEecCCCCeE
Q psy2107         116 DDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHK-------LNIP----------------GHGGPVKGVAWLYNDGKDAA  172 (391)
Q Consensus       116 ~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~-------~~~~----------------~~~~~v~~l~~~~~~~~~~~  172 (391)
                      ++..+++.- .++++.+. .+.|.||+.++-..       ..+.                .....|+.+.... =.....
T Consensus        40 KNNLtalsq-~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~-lg~~EV  116 (717)
T PF08728_consen   40 KNNLTALSQ-RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGD-LGGEEV  116 (717)
T ss_pred             ccceeEEec-CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecc-cCCeeE
Confidence            334444443 66676655 67999998743111       1110                0122344444322 134568


Q ss_pred             EEEEeCCCcEEEEeecC-------C--C-------CceeEEEEEecCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEECC
Q psy2107         173 FISVSTDQTAMIWEWKV-------E--S-------NSIECIHVCRGHERGLETVTVS--ESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       173 l~s~~~dg~v~iwd~~~-------~--~-------~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      |+.|..||.|.+|..+.       .  .       ....+...+. -...+.+++++  ...++||+++....|.||-..
T Consensus       117 Ll~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~  195 (717)
T PF08728_consen  117 LLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFA  195 (717)
T ss_pred             EEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEEEe
Confidence            99999999999997420       0  0       0011222222 24578999998  888899999999999998775


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-----C--eEEEEECCCeEEEEec
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-----D--EIITSSWDHTLKIWDA  303 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~--~l~s~~~dg~i~iwd~  303 (391)
                      .....                          .....-..|...|.+|+|.++     +  .+++++-.|.+.+|++
T Consensus       196 l~~~r--------------------------~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I  245 (717)
T PF08728_consen  196 LVDER--------------------------FYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI  245 (717)
T ss_pred             ccccc--------------------------cccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence            42110                          011111126677889998732     2  4777889999999887

RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.82  E-value=1.3  Score=39.49  Aligned_cols=151  Identities=11%  Similarity=0.124  Sum_probs=75.1

Q ss_pred             CeeEEEEEecCCCCeEEEEEe-----------CCC-cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         157 PVKGVAWLYNDGKDAAFISVS-----------TDQ-TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~-----------~dg-~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      ....|+|   +++++++++-.           ..+ .|.+++-....+.......+.........+++.+++ +++ +..
T Consensus        15 ~P~~ia~---d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~   89 (367)
T TIGR02604        15 NPIAVCF---DERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATP   89 (367)
T ss_pred             CCceeeE---CCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCC
Confidence            3456788   77777766643           123 666665221122222334444334456889999988 444 444


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce-eeecC----ccCcccEEEeccCCeEEEEECC----
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL-ITLKG----HKEAISAVQWTAVDEIITSSWD----  295 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~v~~~~~~~~~~l~s~~~d----  295 (391)
                      ....++.|.+......                      ...+.+ ..+..    +......+.|.+++.|+.+..+    
T Consensus        90 ~~i~~~~d~~gdg~ad----------------------~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~  147 (367)
T TIGR02604        90 PDILFLRDKDGDDKAD----------------------GEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLAS  147 (367)
T ss_pred             CeEEEEeCCCCCCCCC----------------------CccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCc
Confidence            4322333443211000                      000111 11211    2344667888877776553221    


Q ss_pred             ----------------CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee
Q psy2107         296 ----------------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       296 ----------------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~  334 (391)
                                      |.|.-+|...++......+......++|+|+|+++++-.
T Consensus       148 ~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn  202 (367)
T TIGR02604       148 KVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDN  202 (367)
T ss_pred             eeccCCCccCcccccCceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEcc
Confidence                            344445554443322222333567899999998877644

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=95.67  E-value=1.5  Score=39.07  Aligned_cols=196  Identities=13%  Similarity=0.124  Sum_probs=84.4

Q ss_pred             CCeEEEEEe-CCCcEEEEeecCCCCceeEEEEEec---CC----CCeEEEEEcCCCCEEEEEe--CC----CcEEEEECC
Q psy2107         169 KDAAFISVS-TDQTAMIWEWKVESNSIECIHVCRG---HE----RGLETVTVSESRQQFATGG--WD----CLLKIWSAD  234 (391)
Q Consensus       169 ~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~---~~----~~v~~l~~~~~~~~l~sg~--~d----g~i~iwd~~  234 (391)
                      ..++|+..+ ..+.|.|.|........+..+.+..   +.    ..-..+..-|+|+.++++-  .+    |.+.+.|-+
T Consensus        86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~  165 (461)
T PF05694_consen   86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE  165 (461)
T ss_dssp             -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred             cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence            344555555 7889999997655556666666543   11    1223344567888887752  22    456677765


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEE--------------------EEE
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEII--------------------TSS  293 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~--------------------s~~  293 (391)
                      +-...........                          ....-..+-|.|. +.++                    .+.
T Consensus       166 tf~v~g~We~~~~--------------------------~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~  219 (461)
T PF05694_consen  166 TFEVKGRWEKDRG--------------------------PQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGK  219 (461)
T ss_dssp             T--EEEE--SB-T--------------------------T------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-
T ss_pred             cccccceeccCCC--------------------------CCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhccc
Confidence            4322211100000                          0001112222211 1122                    223


Q ss_pred             CCCeEEEEecccCceeEEEECCe---eeEEEEE--CCCCCEEEEe-eCCCcEEEEcC-CCCCcc-eEEEEecc-------
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNK---SFFDVHY--SPLSKLVITA-SADKQIRLYDP-KVKEGA-IVKSTFSS-------  358 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~--~p~~~~l~~g-~~dg~i~iwd~-~~~~~~-~~~~~~~~-------  358 (391)
                      ...++.+||+.+.+.++++....   -...+.|  .|+..+=++| .-...|..|-- ..++-. ..+..+..       
T Consensus       220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~  299 (461)
T PF05694_consen  220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI  299 (461)
T ss_dssp             S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred             ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence            45789999999999999998652   3444555  4544433322 23444554432 222110 01111111       


Q ss_pred             ----------ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         359 ----------HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       359 ----------h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                                -..-|+.|..|.|+..+.+++=.+|.|+.||+
T Consensus       300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDI  341 (461)
T PF05694_consen  300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDI  341 (461)
T ss_dssp             --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-
T ss_pred             ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEec
Confidence                      02458999999988888888888999999997

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=95.66  E-value=1.1  Score=37.49  Aligned_cols=143  Identities=14%  Similarity=0.072  Sum_probs=80.6

Q ss_pred             CeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         206 GLETVTVSESRQQFATGG---WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      .+.+.+++++++.++...   ....+.++....  .                            ....+.  ...+..-.
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~--~----------------------------~~~~~~--g~~l~~PS   72 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGG--P----------------------------VRPVLT--GGSLTRPS   72 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCC--c----------------------------ceeecc--CCcccccc
Confidence            688999999999877655   333455554432  1                            111112  23667778


Q ss_pred             eccCCeEEEEE-CCCeEEEEe-cccCceeE-EEEC--Ce-eeEEEEECCCCCEEEEee---CCCcEEEEcCCCCCcc---
Q psy2107         283 WTAVDEIITSS-WDHTLKIWD-AELGGMKS-EIVG--NK-SFFDVHYSPLSKLVITAS---ADKQIRLYDPKVKEGA---  350 (391)
Q Consensus       283 ~~~~~~l~s~~-~dg~i~iwd-~~~~~~~~-~~~~--~~-~i~~~~~~p~~~~l~~g~---~dg~i~iwd~~~~~~~---  350 (391)
                      |++++.+.+.. .+...+++. ...+.... ....  .. .|..+.+||||..++.-.   .++.|.+=-+......   
T Consensus        73 ~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~  152 (253)
T PF10647_consen   73 WDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPR  152 (253)
T ss_pred             ccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcc
Confidence            88777766554 345555553 33333221 1111  12 799999999999777654   3567777654322111   


Q ss_pred             e---EEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         351 I---VKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       351 ~---~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      .   ...........+++++|.+ +..+++.+..
T Consensus       153 ~l~~~~~~~~~~~~~v~~v~W~~-~~~L~V~~~~  185 (253)
T PF10647_consen  153 RLTGPRRVAPPLLSDVTDVAWSD-DSTLVVLGRS  185 (253)
T ss_pred             eeccceEecccccCcceeeeecC-CCEEEEEeCC
Confidence            1   1122223346799999999 4445544443

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1

Probab=95.64  E-value=1.3  Score=38.18  Aligned_cols=146  Identities=14%  Similarity=0.124  Sum_probs=81.3

Q ss_pred             CEEEEEeCCCcEEEEECCC-CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcc-cEEEec-cCCeEEEEE
Q psy2107         217 QQFATGGWDCLLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAI-SAVQWT-AVDEIITSS  293 (391)
Q Consensus       217 ~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~-~~~~l~s~~  293 (391)
                      +-|.+-+.||.+.-..++. ++..                         .+....+..-..++ ..-++. .++.++-.+
T Consensus       148 ~~F~~lC~DGsl~~v~Ld~~Gk~~-------------------------~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~S  202 (342)
T PF06433_consen  148 RGFSMLCGDGSLLTVTLDADGKEA-------------------------QKSTKVFDPDDDPLFEHPAYSRDGGRLYFVS  202 (342)
T ss_dssp             TEEEEEETTSCEEEEEETSTSSEE-------------------------EEEEEESSTTTS-B-S--EEETTTTEEEEEB
T ss_pred             CceEEEecCCceEEEEECCCCCEe-------------------------EeeccccCCCCcccccccceECCCCeEEEEe
Confidence            4588889999999998874 2210                         00001111112222 222333 445677788


Q ss_pred             CCCeEEEEecccCceeE--EEEC-----------CeeeEEEEECCCCCEEEEee---C-----CC--cEEEEcCCCCCcc
Q psy2107         294 WDHTLKIWDAELGGMKS--EIVG-----------NKSFFDVHYSPLSKLVITAS---A-----DK--QIRLYDPKVKEGA  350 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~--~~~~-----------~~~i~~~~~~p~~~~l~~g~---~-----dg--~i~iwd~~~~~~~  350 (391)
                      .+|.|+--|+.......  .+..           ++...-+++++..+.|.+--   .     |+  .|.++|+.+++  
T Consensus       203 y~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~k--  280 (342)
T PF06433_consen  203 YEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHK--  280 (342)
T ss_dssp             TTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTE--
T ss_pred             cCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEECCCCe--
Confidence            88888888877554322  2221           11234577776555444321   1     12  47777877655  


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEe-eCCCcEEEEecC
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSA-SFDNSVKLWDLR  391 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~-~~dg~v~iwdlr  391 (391)
                       .+.++.- ..++.+|+.+.++.-+|++. ..++.+.+||.+
T Consensus       281 -rv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~  320 (342)
T PF06433_consen  281 -RVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAA  320 (342)
T ss_dssp             -EEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETT
T ss_pred             -EEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCc
Confidence             5555542 23578999998766677655 457999999963

4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.64  E-value=1.2  Score=38.01  Aligned_cols=230  Identities=10%  Similarity=0.071  Sum_probs=108.4

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCCCceEEec---cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNI---PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      ...+|.|.++....++..|.|.--.=.+..=..+   ..-.+....+....   ++...+ ++..|.|..=  .....++
T Consensus        63 ~l~~I~f~~~~g~ivG~~g~ll~T~DgG~tW~~v~l~~~lpgs~~~i~~l~---~~~~~l-~~~~G~iy~T--~DgG~tW  136 (302)
T PF14870_consen   63 HLNSISFDGNEGWIVGEPGLLLHTTDGGKTWERVPLSSKLPGSPFGITALG---DGSAEL-AGDRGAIYRT--TDGGKTW  136 (302)
T ss_dssp             EEEEEEEETTEEEEEEETTEEEEESSTTSS-EE----TT-SS-EEEEEEEE---TTEEEE-EETT--EEEE--SSTTSSE
T ss_pred             eEEEEEecCCceEEEcCCceEEEecCCCCCcEEeecCCCCCCCeeEEEEcC---CCcEEE-EcCCCcEEEe--CCCCCCe
Confidence            4567788755444455556433322122211111   12233344444432   233333 3455654432  2344455


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      +.+.  ..-.+.+..+..+++|++++++..-....-||.-...                           ..+  .-...
T Consensus       137 ~~~~--~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~---------------------------w~~--~~r~~  185 (302)
T PF14870_consen  137 QAVV--SETSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTT---------------------------WQP--HNRNS  185 (302)
T ss_dssp             EEEE---S----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS----------------------------EE--EE--S
T ss_pred             eEcc--cCCcceeEeEEECCCCcEEEEECcccEEEEecCCCcc---------------------------ceE--EccCc
Confidence            4432  3445778899999999988888666556677753210                           111  11224


Q ss_pred             cCcccEEEeccCCeEEEEECCCeEEEEec-ccCceeEE--EE--CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         275 KEAISAVQWTAVDEIITSSWDHTLKIWDA-ELGGMKSE--IV--GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       275 ~~~v~~~~~~~~~~l~s~~~dg~i~iwd~-~~~~~~~~--~~--~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      ...|..|.|.+++.|......|.|+.=+. .....-..  ..  .. -.+..++|.+++...++|+ .|.+. .....++
T Consensus       186 ~~riq~~gf~~~~~lw~~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg-~G~l~-~S~DgGk  263 (302)
T PF14870_consen  186 SRRIQSMGFSPDGNLWMLARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGG-SGTLL-VSTDGGK  263 (302)
T ss_dssp             SS-EEEEEE-TTS-EEEEETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEES-TT-EE-EESSTTS
T ss_pred             cceehhceecCCCCEEEEeCCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeC-CccEE-EeCCCCc
Confidence            57799999998888877889999998772 22221111  11  11 2588999999888888775 55443 3333443


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ..........-......+.|.+ ..+ -...+.+|.+--|
T Consensus       264 tW~~~~~~~~~~~n~~~i~f~~-~~~-gf~lG~~G~ll~~  301 (302)
T PF14870_consen  264 TWQKDRVGENVPSNLYRIVFVN-PDK-GFVLGQDGVLLRY  301 (302)
T ss_dssp             S-EE-GGGTTSSS---EEEEEE-TTE-EEEE-STTEEEEE
T ss_pred             cceECccccCCCCceEEEEEcC-CCc-eEEECCCcEEEEe
Confidence            2222211222345678888876 333 4445678887655

>KOG3630|consensus

Probab=95.61  E-value=0.36  Score=47.49  Aligned_cols=96  Identities=15%  Similarity=0.111  Sum_probs=64.0

Q ss_pred             cccEEEeccC--CeEEEEECCCeEEEEecccCc-eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107         277 AISAVQWTAV--DEIITSSWDHTLKIWDAELGG-MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       277 ~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~  353 (391)
                      -..++.|+|.  ...+.+..|+.|++.-+.... ....+......++++|+|.|+.++.|-..|++.-|....... ..+
T Consensus       157 f~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~leik-~~i  235 (1405)
T KOG3630|consen  157 FQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSLEIK-SEI  235 (1405)
T ss_pred             ccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccccee-ecc
Confidence            3557778843  346777889999988776433 233345556889999999999999999999998887643210 011


Q ss_pred             EEecc-ccCcEEEEEECCCCC
Q psy2107         354 STFSS-HKEWVQSVRWSPIDP  373 (391)
Q Consensus       354 ~~~~~-h~~~v~~~~~~~~~~  373 (391)
                      ..... -...|.+|.|.....
T Consensus       236 p~Pp~~e~yrvl~v~Wl~t~e  256 (1405)
T KOG3630|consen  236 PEPPVEENYRVLSVTWLSTQE  256 (1405)
T ss_pred             cCCCcCCCcceeEEEEeccee
Confidence            11111 146799999987333

>PHA03098 kelch-like protein; Provisional

Probab=95.55  E-value=1  Score=42.42  Aligned_cols=101  Identities=8%  Similarity=0.014  Sum_probs=47.6

Q ss_pred             cCCeEEEEECC------CeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCC--------CcEEEEcCCCCC
Q psy2107         285 AVDEIITSSWD------HTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASAD--------KQIRLYDPKVKE  348 (391)
Q Consensus       285 ~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d--------g~i~iwd~~~~~  348 (391)
                      .+..++.|+.+      ..+..||..+.+-...-..+.  ...+++ ..++..++.|+.+        ..+.+||+.+.+
T Consensus       389 ~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~~~  467 (534)
T PHA03098        389 NNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAI-YHDGKIYVIGGISYIDNIKVYNIVESYNPVTNK  467 (534)
T ss_pred             CCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEE-EECCEEEEECCccCCCCCcccceEEEecCCCCc
Confidence            33445555532      457888887654322111111  111222 2245666666543        238889987654


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCC-----CcEEEEec
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwdl  390 (391)
                      -.. +..+.........+.+   ++.+++.||.+     +.|.+||.
T Consensus       468 W~~-~~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~  510 (534)
T PHA03098        468 WTE-LSSLNFPRINASLCIF---NNKIYVVGGDKYEYYINEIEVYDD  510 (534)
T ss_pred             eee-CCCCCcccccceEEEE---CCEEEEEcCCcCCcccceeEEEeC
Confidence            221 1111111111222233   45677777764     46777765

>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=95.54  E-value=0.041  Score=48.61  Aligned_cols=93  Identities=19%  Similarity=0.213  Sum_probs=55.7

Q ss_pred             CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc--------------
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH--------------  359 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h--------------  359 (391)
                      ..+.+.+||+.+++..........+....|+|+|+.++... ++.|++++...+....  .+..+-              
T Consensus        21 ~~~~y~i~d~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~--lT~dg~~~i~nG~~dwvyeE   97 (353)
T PF00930_consen   21 FKGDYYIYDIETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ--LTTDGEPGIYNGVPDWVYEE   97 (353)
T ss_dssp             EEEEEEEEETTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE--SES--TTTEEESB--HHHHH
T ss_pred             cceeEEEEecCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE--eccccceeEEcCccceeccc
Confidence            35678999999876544433345678899999999999885 6789999876653111  112220              


Q ss_pred             --cCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         360 --KEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       360 --~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                        -+.-..+-||||+.+++..--++..|+.+.
T Consensus        98 Ev~~~~~~~~WSpd~~~la~~~~d~~~v~~~~  129 (353)
T PF00930_consen   98 EVFDRRSAVWWSPDSKYLAFLRFDEREVPEYP  129 (353)
T ss_dssp             HTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEE
T ss_pred             cccccccceEECCCCCEEEEEEECCcCCceEE
Confidence              112356789996655444445556665553

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....

>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain

Probab=95.49  E-value=1.2  Score=39.66  Aligned_cols=99  Identities=10%  Similarity=0.099  Sum_probs=53.2

Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccC-----c--ee-EEEEC-----CeeeEEEEECCCCCEEEEeeCC------
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELG-----G--MK-SEIVG-----NKSFFDVHYSPLSKLVITASAD------  336 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-----~--~~-~~~~~-----~~~i~~~~~~p~~~~l~~g~~d------  336 (391)
                      .....+++.+++ +++++.....++.|....     +  .+ ..+..     +.....++|.|+|.+.++-+..      
T Consensus        72 ~~p~Gi~~~~~G-lyV~~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~  150 (367)
T TIGR02604        72 SMVTGLAVAVGG-VYVATPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVT  150 (367)
T ss_pred             CCccceeEecCC-EEEeCCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceec
Confidence            345778888777 555555544444454311     1  11 11222     2347789999999866544311      


Q ss_pred             -------------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107         337 -------------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       337 -------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                                   |.|.-++.....   ......++ .....++|+| .+.++++-.
T Consensus       151 ~~~~~~~~~~~~~g~i~r~~pdg~~---~e~~a~G~-rnp~Gl~~d~-~G~l~~tdn  202 (367)
T TIGR02604       151 RPGTSDESRQGLGGGLFRYNPDGGK---LRVVAHGF-QNPYGHSVDS-WGDVFFCDN  202 (367)
T ss_pred             cCCCccCcccccCceEEEEecCCCe---EEEEecCc-CCCccceECC-CCCEEEEcc
Confidence                         345555554332   22222333 3357899999 566666543

All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.

>KOG1916|consensus

Probab=95.48  E-value=0.023  Score=53.81  Aligned_cols=97  Identities=9%  Similarity=0.030  Sum_probs=55.0

Q ss_pred             CCeEEEEcCCCceE--EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEE---EEEecCCCCeEE
Q psy2107         135 DHSVHIWTRRGEHK--LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECI---HVCRGHERGLET  209 (391)
Q Consensus       135 dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~---~~~~~~~~~v~~  209 (391)
                      .+-+++-+......  ..+++..+.|..+.|...  +...++  -.-|.+.+|+++.-.+...+-   .........+.-
T Consensus       110 ~~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~--~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~  185 (1283)
T KOG1916|consen  110 ENGVRVANQEPSMRHNELAKGFPGGVGDLQFAHT--KCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQL  185 (1283)
T ss_pred             hhhhhhccCcchhHHHHHHhcCCCCccccccccc--CChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcce
Confidence            34566666533222  234577888888888432  222222  234778999987544443332   222223344455


Q ss_pred             EEEcC---CCCEEEEEeCCCcEEEEECCC
Q psy2107         210 VTVSE---SRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       210 l~~~~---~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      +.|.|   +.-++-.+-.++.|++..++.
T Consensus       186 V~wcp~~~~~~~ic~~~~~~~i~lL~~~r  214 (1283)
T KOG1916|consen  186 VSWCPIAVNKVYICYGLKGGEIRLLNINR  214 (1283)
T ss_pred             eeecccccccceeeeccCCCceeEeeech
Confidence            55655   556677777888888877754

>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A

Probab=95.33  E-value=1.6  Score=37.34  Aligned_cols=183  Identities=11%  Similarity=0.107  Sum_probs=87.8

Q ss_pred             cCCEEEEEECCCeEEEEcCCCce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         125 HNDWILTGCYDHSVHIWTRRGEH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       125 ~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      .......++..|.|+.=.=.+.. ......-.+.+..+..   .+++.++++++.-....-|+  .....+.+...  .-
T Consensus       113 ~~~~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r---~~dG~~vavs~~G~~~~s~~--~G~~~w~~~~r--~~  185 (302)
T PF14870_consen  113 GDGSAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITR---SSDGRYVAVSSRGNFYSSWD--PGQTTWQPHNR--NS  185 (302)
T ss_dssp             ETTEEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE----TTS-EEEEETTSSEEEEE---TT-SS-EEEE----S
T ss_pred             CCCcEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEE---CCCCcEEEEECcccEEEEec--CCCccceEEcc--Cc
Confidence            34444445555654433222221 1222344567888777   67888887776555556776  33333444332  23


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSA-DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      ...|..|.|.|++.+.+. ...|.|+.=+. ......                         .+++..+....-.+..++
T Consensus       186 ~~riq~~gf~~~~~lw~~-~~Gg~~~~s~~~~~~~~w-------------------------~~~~~~~~~~~~~~ld~a  239 (302)
T PF14870_consen  186 SRRIQSMGFSPDGNLWML-ARGGQIQFSDDPDDGETW-------------------------SEPIIPIKTNGYGILDLA  239 (302)
T ss_dssp             SS-EEEEEE-TTS-EEEE-ETTTEEEEEE-TTEEEEE----------------------------B-TTSS--S-EEEEE
T ss_pred             cceehhceecCCCCEEEE-eCCcEEEEccCCCCcccc-------------------------ccccCCcccCceeeEEEE
Confidence            678999999999876554 48888888762 111100                         001111112233478889


Q ss_pred             eccCCeEEEEECCCeEEEEecccCceeEEEEC----CeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         283 WTAVDEIITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                      |.+++.+.+++..|.+. .....|+.-+....    +..+..+.|.+..+-++.| .+|.|.-|
T Consensus       240 ~~~~~~~wa~gg~G~l~-~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~  301 (302)
T PF14870_consen  240 YRPPNEIWAVGGSGTLL-VSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY  301 (302)
T ss_dssp             ESSSS-EEEEESTT-EE-EESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred             ecCCCCEEEEeCCccEE-EeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence            99778877777777654 34445554444332    3467888887766666666 57776544

>PRK13684 Ycf48-like protein; Provisional

Probab=95.30  E-value=1.8  Score=37.86  Aligned_cols=178  Identities=5%  Similarity=-0.054  Sum_probs=92.0

Q ss_pred             EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107         175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  254 (391)
                      .++..|.|..=+  ....++..+..  .-...+..+.+.|++.+++++ ..|.+..- .+.+..                
T Consensus       147 ~~g~~G~i~~S~--DgG~tW~~~~~--~~~g~~~~i~~~~~g~~v~~g-~~G~i~~s-~~~gg~----------------  204 (334)
T PRK13684        147 MATNVGAIYRTT--DGGKNWEALVE--DAAGVVRNLRRSPDGKYVAVS-SRGNFYST-WEPGQT----------------  204 (334)
T ss_pred             eeeccceEEEEC--CCCCCceeCcC--CCcceEEEEEECCCCeEEEEe-CCceEEEE-cCCCCC----------------
Confidence            344455543322  23334443322  224578899999988666554 45554421 111100                


Q ss_pred             cccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-----CeeeEEEEECCCCCE
Q psy2107         255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLSKL  329 (391)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~~~  329 (391)
                               +...+  ...-...+.++.+.+++.++..+..|.+++=+...+..-.....     ...+..+.+.|++..
T Consensus       205 ---------tW~~~--~~~~~~~l~~i~~~~~g~~~~vg~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~  273 (334)
T PRK13684        205 ---------AWTPH--QRNSSRRLQSMGFQPDGNLWMLARGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEI  273 (334)
T ss_pred             ---------eEEEe--eCCCcccceeeeEcCCCCEEEEecCCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCE
Confidence                     01111  11234567888888777777777778775433333332222121     135788899998877


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +++| .+|.+. .....++..........-....+.+.|.. +... ...+..|.|.-|+
T Consensus       274 ~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~-~~~~-~~~G~~G~il~~~  329 (334)
T PRK13684        274 WAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLD-PEKG-FVLGQRGVLLRYV  329 (334)
T ss_pred             EEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeC-CCce-EEECCCceEEEec
Confidence            6665 467554 33333332222111112223577787775 4444 4466678887664

>KOG1897|consensus

Probab=95.17  E-value=2.6  Score=41.22  Aligned_cols=96  Identities=9%  Similarity=0.130  Sum_probs=66.5

Q ss_pred             EEEECCCeEEEEecccCceeEEE-ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         290 ITSSWDHTLKIWDAELGGMKSEI-VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      +.++-...|++|+..+.+.++.- ....++..+...-.|..+++|.--+++.+...+..++......-.-+..+.+++.+
T Consensus       842 llA~In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtavei  921 (1096)
T KOG1897|consen  842 LLAGINQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEI  921 (1096)
T ss_pred             EEEecCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEE
Confidence            34456789999999888555443 33447788888888999999998899888777665544444344457788899888


Q ss_pred             CCCCCCEEEEeeCCCcEEE
Q psy2107         369 SPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~i  387 (391)
                      -. +. .++-+..+|.+.+
T Consensus       922 l~-~d-~ylgae~~gNlf~  938 (1096)
T KOG1897|consen  922 LD-DD-TYLGAENSGNLFT  938 (1096)
T ss_pred             ec-Cc-eEEeecccccEEE
Confidence            75 33 3445555666554

>PHA02790 Kelch-like protein; Provisional

Probab=95.07  E-value=1.9  Score=39.92  Aligned_cols=102  Identities=10%  Similarity=0.024  Sum_probs=51.6

Q ss_pred             cCCEEEEEECCC-----eEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCce
Q psy2107         125 HNDWILTGCYDH-----SVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSI  194 (391)
Q Consensus       125 ~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~  194 (391)
                      .+.+++.|+.++     .+..||.....-..+..   .......+..     ++...+.|+.++  .+..||  ...+.+
T Consensus       271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~-----~~~iYviGG~~~~~sve~yd--p~~n~W  343 (480)
T PHA02790        271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPA-----NNKLYVVGGLPNPTSVERWF--HGDAAW  343 (480)
T ss_pred             CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEE-----CCEEEEECCcCCCCceEEEE--CCCCeE
Confidence            355667777543     56677875443332221   1111222233     567777787643  566676  334445


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCC
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDC---LLKIWSADI  235 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~  235 (391)
                      ..+..+.........+  .-+++..+.||.++   .+..||.++
T Consensus       344 ~~~~~l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~  385 (480)
T PHA02790        344 VNMPSLLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNH  385 (480)
T ss_pred             EECCCCCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCC
Confidence            4444333222222222  22567777777653   356677654

>KOG4499|consensus

Probab=95.03  E-value=1.5  Score=35.31  Aligned_cols=101  Identities=10%  Similarity=0.174  Sum_probs=63.7

Q ss_pred             ccEEEeccC-Ce-EEEEECCCeEEEEe--cccCce-----eEEEECCe-----eeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         278 ISAVQWTAV-DE-IITSSWDHTLKIWD--AELGGM-----KSEIVGNK-----SFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       278 v~~~~~~~~-~~-l~s~~~dg~i~iwd--~~~~~~-----~~~~~~~~-----~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      -..++|+.+ .. .++-+.+-+|.-||  ..+|..     +..++...     ..-.+++..+|++.++.-..++|..+|
T Consensus       160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d  239 (310)
T KOG4499|consen  160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD  239 (310)
T ss_pred             CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence            356778733 33 44556777887777  555543     33332211     123455566788888888889999999


Q ss_pred             CCCCCcceEEEEeccccCcEEEEEECCCC-CCEEEEeeC
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASF  381 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~  381 (391)
                      +.+++   ++.++.-....|++++|--.+ ..+.+|+..
T Consensus       240 p~tGK---~L~eiklPt~qitsccFgGkn~d~~yvT~aa  275 (310)
T KOG4499|consen  240 PTTGK---ILLEIKLPTPQITSCCFGGKNLDILYVTTAA  275 (310)
T ss_pred             CCCCc---EEEEEEcCCCceEEEEecCCCccEEEEEehh
Confidence            98877   666666567889999996422 224445443

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=94.92  E-value=1.4  Score=42.75  Aligned_cols=73  Identities=19%  Similarity=0.359  Sum_probs=49.6

Q ss_pred             eeEEEEECCCCCEEEEeeCCCcEEEEcCCCC----------CcceEEEEe--------ccccCcEEEEEECCCC--CCEE
Q psy2107         317 SFFDVHYSPLSKLVITASADKQIRLYDPKVK----------EGAIVKSTF--------SSHKEWVQSVRWSPID--PQLF  376 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~----------~~~~~~~~~--------~~h~~~v~~~~~~~~~--~~~l  376 (391)
                      .|..+.++|+|.+|+..+..| |.|..+...          +.....+.+        ..+...|..+.|+|.+  +..|
T Consensus        86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l  164 (717)
T PF10168_consen   86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL  164 (717)
T ss_pred             eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence            688999999999999888766 444444211          111111111        1344579999999953  4577


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      +.-..|+++|+||+
T Consensus       165 ~vLtsdn~lR~y~~  178 (717)
T PF10168_consen  165 VVLTSDNTLRLYDI  178 (717)
T ss_pred             EEEecCCEEEEEec
Confidence            88888999999997

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG1897|consensus

Probab=94.86  E-value=4.3  Score=39.84  Aligned_cols=266  Identities=11%  Similarity=0.045  Sum_probs=127.7

Q ss_pred             CCcEEEEEec-----CC---EEEEEECCCeEEEEcC--CCceEEe--c--cCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         116 DDWVSAIDFH-----ND---WILTGCYDHSVHIWTR--RGEHKLN--I--PGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       116 ~~~V~~~~~~-----~~---~l~t~~~dg~i~iwd~--~~~~~~~--~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      ...|.|+.++     ++   +++.|.++..+.+--.  +...+..  +  ..-+..|.-..|   ..+..+|.++..||.
T Consensus       530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~~l~~~~iPRSIl~~~~---e~d~~yLlvalgdG~  606 (1096)
T KOG1897|consen  530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHEQLSGEIIPRSILLTTF---EGDIHYLLVALGDGA  606 (1096)
T ss_pred             cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeeeccCCCccchheeeEEe---eccceEEEEEcCCce
Confidence            4578888886     22   8999988887666543  2222221  1  122334555555   556789999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC---------CCCCCCC---
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP---------SENGDEG---  249 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~---------~~~~~~~---  249 (391)
                      +.-+.+...+......+...--..++.--.|+..++.-+-+..|+...+|.-+..-.....         +......   
T Consensus       607 l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~  686 (1096)
T KOG1897|consen  607 LLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDS  686 (1096)
T ss_pred             EEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCce
Confidence            9988876554433333322222445544455444333333334444444443221111000         0000000   


Q ss_pred             -cccccccccc--ccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC-----------C---CeEEEEecccCceeEE
Q psy2107         250 -TTSKKRKKEY--SSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-----------D---HTLKIWDAELGGMKSE  311 (391)
Q Consensus       250 -~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-----------d---g~i~iwd~~~~~~~~~  311 (391)
                       ..........  .+.-....+.++.- ......+++.+... +.+.+.           .   ..++++|-++.+.+..
T Consensus       687 l~~~~~~~l~i~tid~iqkl~irtvpl-~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~  765 (1096)
T KOG1897|consen  687 LASANGGALTIGTIDEIQKLHIRTVPL-GESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSS  765 (1096)
T ss_pred             EEEecCCceEEEEecchhhcceeeecC-CCChhheEecccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEee
Confidence             0000000000  00111111222222 23345566664333 222211           1   2467777666655544


Q ss_pred             EECCe-----eeEEEEECCC-CCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCE
Q psy2107         312 IVGNK-----SFFDVHYSPL-SKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       312 ~~~~~-----~i~~~~~~p~-~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~  375 (391)
                      .+...     .+.++.|..| +.++++|+.          .|.|.+|.....+.-..+.... -++.|.++.--  ++++
T Consensus       766 hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e~~-v~Gav~aL~~f--ngkl  842 (1096)
T KOG1897|consen  766 HEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAETV-VKGAVYALVEF--NGKL  842 (1096)
T ss_pred             ccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeeeee-eccceeehhhh--CCeE
Confidence            43222     5666778877 778888852          4778888766533222222222 23445555432  5555


Q ss_pred             EEEeeCCCcEEEEec
Q psy2107         376 FVSASFDNSVKLWDL  390 (391)
Q Consensus       376 l~s~~~dg~v~iwdl  390 (391)
                      +|+-  ...|++|+.
T Consensus       843 lA~I--n~~vrLye~  855 (1096)
T KOG1897|consen  843 LAGI--NQSVRLYEW  855 (1096)
T ss_pred             EEec--CcEEEEEEc
Confidence            6544  467888864

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=94.74  E-value=2.7  Score=36.82  Aligned_cols=258  Identities=10%  Similarity=0.087  Sum_probs=116.3

Q ss_pred             EEEEEecCC-EEEEEECCCeEEEEcCCCce---EEec----cCCCCCeeEEEEEecCCCCeEE-EEEeC------CC--c
Q psy2107         119 VSAIDFHND-WILTGCYDHSVHIWTRRGEH---KLNI----PGHGGPVKGVAWLYNDGKDAAF-ISVST------DQ--T  181 (391)
Q Consensus       119 V~~~~~~~~-~l~t~~~dg~i~iwd~~~~~---~~~~----~~~~~~v~~l~~~~~~~~~~~l-~s~~~------dg--~  181 (391)
                      -++|+|.++ .++++...|.|++++.++..   +..+    .........++++|.-+...+| ++.+.      ..  .
T Consensus         4 P~~~a~~pdG~l~v~e~~G~i~~~~~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~   83 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVAERSGRIWVVDKDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNR   83 (331)
T ss_dssp             EEEEEEETTSCEEEEETTTEEEEEETTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEE
T ss_pred             ceEEEEeCCCcEEEEeCCceEEEEeCCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCccee
Confidence            356777633 44556779999999964443   2222    2344678899997643333333 33332      12  3


Q ss_pred             EEEEeecCCCCce---e-EEEEEec---CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107         182 AMIWEWKVESNSI---E-CIHVCRG---HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       182 v~iwd~~~~~~~~---~-~~~~~~~---~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  254 (391)
                      |.-|.+.......   + .+..+..   ....-..|+|.|++.+.++.+..+.     ....+....  ..+...... .
T Consensus        84 v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~-----~~~~~~~~~--~~G~ilri~-~  155 (331)
T PF07995_consen   84 VVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGN-----DDNAQDPNS--LRGKILRID-P  155 (331)
T ss_dssp             EEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTT-----GGGGCSTTS--STTEEEEEE-T
T ss_pred             eEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCC-----ccccccccc--ccceEEEec-c
Confidence            3334332221111   1 1222222   2345667999999977776665443     100000000  000000000 0


Q ss_pred             cccc-----cccCCCCCceeeecCccCcccEEEeccC-CeEEEEE--CCCeEEEEecccC--------------------
Q psy2107         255 RKKE-----YSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSS--WDHTLKIWDAELG--------------------  306 (391)
Q Consensus       255 ~~~~-----~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~--~dg~i~iwd~~~~--------------------  306 (391)
                      ....     ............-.++.. ...++|++. +.|+++-  .+..=.|--+..|                    
T Consensus       156 dG~~p~dnP~~~~~~~~~~i~A~GlRN-~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~  234 (331)
T PF07995_consen  156 DGSIPADNPFVGDDGADSEIYAYGLRN-PFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIG  234 (331)
T ss_dssp             TSSB-TTSTTTTSTTSTTTEEEE--SE-EEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-EC
T ss_pred             cCcCCCCCccccCCCceEEEEEeCCCc-cccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccc
Confidence            0000     000000011111223333 357888876 7777663  2322222222111                    


Q ss_pred             ---------ceeEEEECCeeeEEEEECC-------CCCEEEEeeCCCcEEEEcCCCCCcceEEEE-eccccCcEEEEEEC
Q psy2107         307 ---------GMKSEIVGNKSFFDVHYSP-------LSKLVITASADKQIRLYDPKVKEGAIVKST-FSSHKEWVQSVRWS  369 (391)
Q Consensus       307 ---------~~~~~~~~~~~i~~~~~~p-------~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~  369 (391)
                               .+...+..+..+..+.|-.       .|.++++.-..+.|....+........... +......+..+++.
T Consensus       235 ~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~  314 (331)
T PF07995_consen  235 DAPSCPGFVPPVFAYPPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG  314 (331)
T ss_dssp             TGSS-TTS---SEEETTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred             cccCCCCcCccceeecCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence                     1233344455666677653       345666666567777777754322111222 33445589999999


Q ss_pred             CCCCCEEEEeeCCCcEE
Q psy2107         370 PIDPQLFVSASFDNSVK  386 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~  386 (391)
                      | ++.++++...+|.|.
T Consensus       315 p-DG~Lyv~~d~~G~iy  330 (331)
T PF07995_consen  315 P-DGALYVSDDSDGKIY  330 (331)
T ss_dssp             T-TSEEEEEE-TTTTEE
T ss_pred             C-CCeEEEEECCCCeEe
Confidence            9 566777777888874

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PHA02790 Kelch-like protein; Provisional

Probab=94.58  E-value=2.5  Score=39.19  Aligned_cols=98  Identities=6%  Similarity=-0.033  Sum_probs=47.8

Q ss_pred             cCCeEEEEECC---CeEEEEecccCceeEEEECCee--eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         285 AVDEIITSSWD---HTLKIWDAELGGMKSEIVGNKS--FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       285 ~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~--i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      .+...+.|+.+   ..+..||.++.+-...-....+  -.+++ .-+++..+.|+   .+.+||+.+..-. ....+...
T Consensus       362 ~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~-~~~~~IYv~GG---~~e~ydp~~~~W~-~~~~m~~~  436 (480)
T PHA02790        362 NNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL-VFGRRLFLVGR---NAEFYCESSNTWT-LIDDPIYP  436 (480)
T ss_pred             CCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE-EECCEEEEECC---ceEEecCCCCcEe-EcCCCCCC
Confidence            33345556544   3466788776543221111111  11121 22456666663   5778998765422 22222222


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCC-----CcEEEEec
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDL  390 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwdl  390 (391)
                      ......+..   ++.+.+.||.+     ..|..||.
T Consensus       437 r~~~~~~v~---~~~IYviGG~~~~~~~~~ve~Yd~  469 (480)
T PHA02790        437 RDNPELIIV---DNKLLLIGGFYRGSYIDTIEVYNN  469 (480)
T ss_pred             ccccEEEEE---CCEEEEECCcCCCcccceEEEEEC
Confidence            222333333   55788888865     35667765

>KOG1900|consensus

Probab=94.46  E-value=3.5  Score=41.80  Aligned_cols=165  Identities=15%  Similarity=0.141  Sum_probs=89.4

Q ss_pred             ECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC-----CCeEEEEEeCCCcEEEEeecCCCCcee-----EEEEEe
Q psy2107         133 CYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG-----KDAAFISVSTDQTAMIWEWKVESNSIE-----CIHVCR  201 (391)
Q Consensus       133 ~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~-----~~~~l~s~~~dg~v~iwd~~~~~~~~~-----~~~~~~  201 (391)
                      +.|+.+.+|+. ++.....+.+-...|..|......|     .-++++..+.--.|.++-+........     ....+.
T Consensus        96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~  175 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS  175 (1311)
T ss_pred             EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence            46789999999 4566777777777777777653322     123344444455566665432222111     112222


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCccCcccE
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHKEAISA  280 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~  280 (391)
                      ...-.|.|+....+|+.+++| .||  .+|.+.......-....-. ........  ... .-.. +..+ ..+..+|..
T Consensus       176 ~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~-Kiclt~s~--ls~-lvPs-~~~~~~~~~dpI~q  247 (1311)
T KOG1900|consen  176 VDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCR-KICLTKSV--LSS-LVPS-LLSVPGSSKDPIRQ  247 (1311)
T ss_pred             cCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccc-cccCchhH--HHH-hhhh-hhcCCCCCCCccee
Confidence            335578899988888866655 555  5566533221110000000 00000000  000 0001 2222 367789999


Q ss_pred             EEec-cCCeEEEEECCCeEEEEeccc
Q psy2107         281 VQWT-AVDEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       281 ~~~~-~~~~l~s~~~dg~i~iwd~~~  305 (391)
                      +... .-+.+++-+..|+|++||+..
T Consensus       248 i~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  248 ITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             eEeccccceeeeeccCceEEEEEccC
Confidence            9998 445688889999999999975

>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.31  E-value=2.7  Score=35.15  Aligned_cols=120  Identities=11%  Similarity=0.142  Sum_probs=77.7

Q ss_pred             cCCCCcEEEEEecC--CEEEEEECCCeEEEE-cCCCceEEeccCC-CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         113 ILHDDWVSAIDFHN--DWILTGCYDHSVHIW-TRRGEHKLNIPGH-GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       113 ~~h~~~V~~~~~~~--~~l~t~~~dg~i~iw-d~~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .+-...|+++.|++  +.|++......-.|| +.+|..+.+++-. -..--.+.|   -.++.+.++--.++.+.++.++
T Consensus        82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Iey---ig~n~fvi~dER~~~l~~~~vd  158 (316)
T COG3204          82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEY---IGGNQFVIVDERDRALYLFTVD  158 (316)
T ss_pred             ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEE---ecCCEEEEEehhcceEEEEEEc
Confidence            34445599999994  355555555555555 6678877766521 122345666   4466777777778888888765


Q ss_pred             CCCCcee------EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         189 VESNSIE------CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       189 ~~~~~~~------~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      ..+....      .+......+.....++|.|....|+.+-+-.-+.||.+..
T Consensus       159 ~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~  211 (316)
T COG3204         159 ADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQ  211 (316)
T ss_pred             CCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEec
Confidence            4322111      1111122266889999999999999998888899988763

>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]

Probab=94.30  E-value=3.1  Score=35.77  Aligned_cols=111  Identities=6%  Similarity=0.066  Sum_probs=66.3

Q ss_pred             eeeecCccCcccEEEeccCC-eEEEE-ECCCeEEEEeccc--Cce---eEEEE---CCeeeEEEEECCCCCEEEEeeCCC
Q psy2107         268 LITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAEL--GGM---KSEIV---GNKSFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~--~~~---~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg  337 (391)
                      ...+..+-..-+.|+|+|++ .++.+ +..+.|.-|++..  +..   .....   .....-.++...+|.+-+++..+|
T Consensus       155 ~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g  234 (307)
T COG3386         155 VRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGG  234 (307)
T ss_pred             EEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCC
Confidence            33344444556789999877 45555 4457888887752  211   11111   123445577777888776555554


Q ss_pred             -cEEEEcCCCCCcceEEEEeccccCcEEEEEECC-CCCCEEEEeeCC
Q psy2107         338 -QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP-IDPQLFVSASFD  382 (391)
Q Consensus       338 -~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~~d  382 (391)
                       .|.+|+.. ++   ++..+.-....+++++|-- +...+++|+...
T Consensus       235 ~~v~~~~pd-G~---l~~~i~lP~~~~t~~~FgG~~~~~L~iTs~~~  277 (307)
T COG3386         235 GRVVRFNPD-GK---LLGEIKLPVKRPTNPAFGGPDLNTLYITSARS  277 (307)
T ss_pred             ceEEEECCC-Cc---EEEEEECCCCCCccceEeCCCcCEEEEEecCC
Confidence             89999987 44   4555554546788888853 234566666554

>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins

Probab=94.26  E-value=0.22  Score=28.02  Aligned_cols=31  Identities=10%  Similarity=0.013  Sum_probs=25.5

Q ss_pred             CCeEEEEEcCCC---CEEEEEeCCCcEEEEECCC
Q psy2107         205 RGLETVTVSESR---QQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       205 ~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~  235 (391)
                      +.|.+++|+|+.   .+|+.+-.-|.|.++|+++
T Consensus         1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~   34 (43)
T PF10313_consen    1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS   34 (43)
T ss_pred             CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence            468999999854   4788887889999999984

It contains a characteristic DLL sequence motif.

>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family

Probab=94.04  E-value=5.4  Score=37.49  Aligned_cols=23  Identities=22%  Similarity=0.107  Sum_probs=18.6

Q ss_pred             CEEEEEeCCCcEEEEECCCCCCC
Q psy2107         217 QQFATGGWDCLLKIWSADISKER  239 (391)
Q Consensus       217 ~~l~sg~~dg~i~iwd~~~~~~~  239 (391)
                      ..++.++.|+.|...|.++++..
T Consensus       121 ~~v~v~t~dg~l~ALDa~TGk~~  143 (527)
T TIGR03075       121 GKVFFGTLDARLVALDAKTGKVV  143 (527)
T ss_pred             CEEEEEcCCCEEEEEECCCCCEE
Confidence            45777888999999999887764

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=93.99  E-value=3.2  Score=34.75  Aligned_cols=114  Identities=12%  Similarity=0.023  Sum_probs=74.5

Q ss_pred             CCCCcEEEEEecCCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         114 LHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       114 ~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      .-.+-+..+.+++++...+..+.-++|.|+...   .+.......+--.++..     .|++...+..|.-+.+.|+...
T Consensus        84 ~~~~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~v-----sGn~aYVadlddgfLivdvsdp  158 (370)
T COG5276          84 NARDLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYV-----SGNYAYVADLDDGFLIVDVSDP  158 (370)
T ss_pred             ehhhhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEe-----cCCEEEEeeccCcEEEEECCCC
Confidence            345567778888999999999989999998432   22222223355566666     5667777776667788887533


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      . .......+......-..++.+  |++-..+..|+-+.+-|+..
T Consensus       159 s-sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSn  200 (370)
T COG5276         159 S-SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSN  200 (370)
T ss_pred             C-CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccC
Confidence            3 333334444334444566665  55667777899999999975

>KOG4499|consensus

Probab=93.62  E-value=3.2  Score=33.51  Aligned_cols=95  Identities=8%  Similarity=0.063  Sum_probs=58.7

Q ss_pred             eEEEEEcCCCCEE-EEEeCCCcEEEEEC--CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc----cCccc
Q psy2107         207 LETVTVSESRQQF-ATGGWDCLLKIWSA--DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH----KEAIS  279 (391)
Q Consensus       207 v~~l~~~~~~~~l-~sg~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~  279 (391)
                      -..++|+.+.+.+ ++-+.+-.|.-||.  .++...                        .++.+..+...    .-.-.
T Consensus       160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~s------------------------nr~~i~dlrk~~~~e~~~PD  215 (310)
T KOG4499|consen  160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLS------------------------NRKVIFDLRKSQPFESLEPD  215 (310)
T ss_pred             CccccccccCcEEEEEccCceEEeeeecCCCccccc------------------------CcceeEEeccCCCcCCCCCC
Confidence            3567888776655 44566677877884  443321                        12222222210    11112


Q ss_pred             EEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECC
Q psy2107         280 AVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP  325 (391)
Q Consensus       280 ~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p  325 (391)
                      .++...++ ..+++-..++|...|..+|+.+.++..+. .+++++|--
T Consensus       216 Gm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG  263 (310)
T KOG4499|consen  216 GMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG  263 (310)
T ss_pred             cceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence            34445334 45666678899999999999999998876 799999963

>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation

Probab=93.26  E-value=2.6  Score=35.19  Aligned_cols=111  Identities=13%  Similarity=0.151  Sum_probs=63.1

Q ss_pred             cccEEEeccCCe-EEEEE-CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEc-CCCCCcceEE
Q psy2107         277 AISAVQWTAVDE-IITSS-WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD-PKVKEGAIVK  353 (391)
Q Consensus       277 ~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd-~~~~~~~~~~  353 (391)
                      .+.+.+.++++. ++... .++.-.+|-...+...........+..-.|++++...+....+...+++. ...+......
T Consensus        25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~~~~~~~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~  104 (253)
T PF10647_consen   25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGPVRPVLTGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE  104 (253)
T ss_pred             cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCcceeeccCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence            577888886554 43333 24444444444444444433444788889999988777776677777763 2232222222


Q ss_pred             EEeccccCcEEEEEECCCCCCEEEEee--CCCcEEE
Q psy2107         354 STFSSHKEWVQSVRWSPIDPQLFVSAS--FDNSVKL  387 (391)
Q Consensus       354 ~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~v~i  387 (391)
                      .....-...|+.+.+|||+.++.+...  .++.|.+
T Consensus       105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~v  140 (253)
T PF10647_consen  105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYV  140 (253)
T ss_pred             ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEE
Confidence            222222228999999997766544442  3455544

It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=93.22  E-value=0.59  Score=37.95  Aligned_cols=62  Identities=11%  Similarity=0.163  Sum_probs=47.2

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEE---------------ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEI---------------VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~---------------~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      .+.++++.+.+|.+++||+.+++.....               .....|..+.++.+|.-+++-+ +|..+.|+..-.
T Consensus        21 ~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~   97 (219)
T PF07569_consen   21 NGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLG   97 (219)
T ss_pred             CCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccc
Confidence            4567889999999999999988764432               2334788889998888777654 688999997654

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin

Probab=92.88  E-value=1.8  Score=35.21  Aligned_cols=66  Identities=6%  Similarity=0.183  Sum_probs=43.4

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCCCceEEe--------cc-------CCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLN--------IP-------GHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~--------~~-------~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      ++..+...++++++-+.+|.+++||+...+..-        +.       .....|..+..   +.+|.-+++- .+|..
T Consensus        14 ~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~l---t~~G~PiV~l-sng~~   89 (219)
T PF07569_consen   14 PVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSL---TSNGVPIVTL-SNGDS   89 (219)
T ss_pred             ceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEE---cCCCCEEEEE-eCCCE
Confidence            566678889999999999999999995443321        11       23455666666   4455555543 35667


Q ss_pred             EEEee
Q psy2107         183 MIWEW  187 (391)
Q Consensus       183 ~iwd~  187 (391)
                      ..|+.
T Consensus        90 y~y~~   94 (219)
T PF07569_consen   90 YSYSP   94 (219)
T ss_pred             EEecc
Confidence            77763

These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=92.63  E-value=7.7  Score=35.18  Aligned_cols=188  Identities=13%  Similarity=0.096  Sum_probs=92.3

Q ss_pred             CCCCeEEEEE-eCCC----cEEEEeecCCCCceeEEE-EEecCCCCeEEEEEcCCCCEEEEEeCCC-----------cEE
Q psy2107         167 DGKDAAFISV-STDQ----TAMIWEWKVESNSIECIH-VCRGHERGLETVTVSESRQQFATGGWDC-----------LLK  229 (391)
Q Consensus       167 ~~~~~~l~s~-~~dg----~v~iwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----------~i~  229 (391)
                      +++++++|.+ +..|    .++++|+.  ++  +.+. .+..  .....+.|.++++.|+....+.           .|+
T Consensus       132 Spdg~~la~~~s~~G~e~~~l~v~Dl~--tg--~~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~  205 (414)
T PF02897_consen  132 SPDGKRLAYSLSDGGSEWYTLRVFDLE--TG--KFLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY  205 (414)
T ss_dssp             TTTSSEEEEEEEETTSSEEEEEEEETT--TT--EEEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred             CCCCCEEEEEecCCCCceEEEEEEECC--CC--cCcCCcccc--cccceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence            7888877755 3344    48888865  33  2222 2221  1123499999988776655433           367


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc--ccEEEeccCC-eEEE-EEC--C-CeEEEEe
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA--ISAVQWTAVD-EIIT-SSW--D-HTLKIWD  302 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~-~l~s-~~~--d-g~i~iwd  302 (391)
                      .|.+.+...                           .-...+......  ...+..++++ .++. ...  + ..+.+.|
T Consensus       206 ~~~~gt~~~---------------------------~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d  258 (414)
T PF02897_consen  206 RHKLGTPQS---------------------------EDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLD  258 (414)
T ss_dssp             EEETTS-GG---------------------------G-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEE
T ss_pred             EEECCCChH---------------------------hCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEe
Confidence            777755332                           112233333332  3456666544 4333 332  2 4578888


Q ss_pred             cccC-----ceeEEEECCeeeE-EEEECCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccccC--cEEEEEECCC
Q psy2107         303 AELG-----GMKSEIVGNKSFF-DVHYSPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSHKE--WVQSVRWSPI  371 (391)
Q Consensus       303 ~~~~-----~~~~~~~~~~~i~-~~~~~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~  371 (391)
                      +..+     ...........+. .+... .+.+++...   ..+.|.-.++...........+..|..  .+..+...  
T Consensus       259 ~~~~~~~~~~~~~l~~~~~~~~~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--  335 (414)
T PF02897_consen  259 LDDGGSPDAKPKLLSPREDGVEYYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--  335 (414)
T ss_dssp             CCCTTTSS-SEEEEEESSSS-EEEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--
T ss_pred             ccccCCCcCCcEEEeCCCCceEEEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--
Confidence            8764     3333333333332 23332 333444332   345677777766542112224445555  45555543  


Q ss_pred             CCCEEEEeeCCCc--EEEEec
Q psy2107         372 DPQLFVSASFDNS--VKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~--v~iwdl  390 (391)
                      +..++++.-.++.  |+++++
T Consensus       336 ~~~Lvl~~~~~~~~~l~v~~~  356 (414)
T PF02897_consen  336 KDYLVLSYRENGSSRLRVYDL  356 (414)
T ss_dssp             TTEEEEEEEETTEEEEEEEET
T ss_pred             CCEEEEEEEECCccEEEEEEC
Confidence            5566777766664  566665

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>COG5276 Uncharacterized conserved protein [Function unknown]

Probab=92.59  E-value=5.5  Score=33.42  Aligned_cols=133  Identities=14%  Similarity=0.074  Sum_probs=85.1

Q ss_pred             ceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC---ce-EEeccCCCCCeeEEEEEecCCC
Q psy2107          94 NVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG---EH-KLNIPGHGGPVKGVAWLYNDGK  169 (391)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~---~~-~~~~~~~~~~v~~l~~~~~~~~  169 (391)
                      .-+++-.......|.......-.+.-.++..+|++...+..|.-+.+.|+..   .. ...+......-..++.     .
T Consensus       106 sGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lagrya~~~~d~~~v~I-----S  180 (370)
T COG5276         106 SGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAGRYALPGGDTHDVAI-----S  180 (370)
T ss_pred             CceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeeeeeccCCCCceeEEE-----e
Confidence            3456666666666655555555577888899999999999777788888832   22 2234444444566776     4


Q ss_pred             CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      |++-..+..|+-+.+-|+.... ....+.... ....+.++..+++..+++...  --+.+-|..+
T Consensus       181 Gn~AYvA~~d~GL~ivDVSnp~-sPvli~~~n-~g~g~~sv~vsdnr~y~vvy~--egvlivd~s~  242 (370)
T COG5276         181 GNYAYVAWRDGGLTIVDVSNPH-SPVLIGSYN-TGPGTYSVSVSDNRAYLVVYD--EGVLIVDVSG  242 (370)
T ss_pred             cCeEEEEEeCCCeEEEEccCCC-CCeEEEEEe-cCCceEEEEecCCeeEEEEcc--cceEEEecCC
Confidence            5667777889999999976333 223333332 223788888888776665544  3466667655

>KOG3630|consensus

Probab=92.31  E-value=2.3  Score=42.37  Aligned_cols=96  Identities=8%  Similarity=-0.109  Sum_probs=63.2

Q ss_pred             ECCCeEEEEcCCCc------eEEec------cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE
Q psy2107         133 CYDHSVHIWTRRGE------HKLNI------PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC  200 (391)
Q Consensus       133 ~~dg~i~iwd~~~~------~~~~~------~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  200 (391)
                      +.+-.|..||+..-      ....+      .....-..++.|.|.-+.  ..+.+..|+.|++..+.....   .+..+
T Consensus       121 sng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~--n~av~l~dlsl~V~~~~~~~~---~v~s~  195 (1405)
T KOG3630|consen  121 SNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPL--NSAVDLSDLSLRVKSTKQLAQ---NVTSF  195 (1405)
T ss_pred             cCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccc--hhhhhccccchhhhhhhhhhh---hhccc
Confidence            34447888887321      11111      123345678899776443  467778899999987542211   12222


Q ss_pred             ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         201 RGHERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       201 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                       .-....+|++|+|.|+.++.|-..|++.-|...
T Consensus       196 -p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~  228 (1405)
T KOG3630|consen  196 -PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS  228 (1405)
T ss_pred             -CcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence             235678999999999999999999999988764

>KOG1983|consensus

Probab=92.14  E-value=4.3  Score=41.16  Aligned_cols=72  Identities=13%  Similarity=0.001  Sum_probs=46.2

Q ss_pred             CccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+...+.+..+.....+..+..-+.+-+|+.........+.....    ..++++..++++..||.+..||...+.
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~h~Dgs~~fWd~s~g~  267 (993)
T KOG1983|consen  196 LIEYESLQVLYYSPTKILIGFNRGLVVIKDRASKYVQSAYLPNGQ----LESRDGSHFVSYHTDGSYAFWDVSSGK  267 (993)
T ss_pred             ccccccceeeeecCCCcceeeeeeeeeehhcccccchhhcccccc----cCccCCceEEEEEecCCEEeeecCCCc
Confidence            345555666665445555666666777776554433333332221    117889999999999999999987753

>KOG4460|consensus

Probab=92.13  E-value=3.1  Score=37.74  Aligned_cols=74  Identities=19%  Similarity=0.271  Sum_probs=47.5

Q ss_pred             eeEEEEECCCCCEEEEeeCCCcEEEEcCC---------CCCcceEEEEe-------c-cccCcEEEEEECCCC--CCEEE
Q psy2107         317 SFFDVHYSPLSKLVITASADKQIRLYDPK---------VKEGAIVKSTF-------S-SHKEWVQSVRWSPID--PQLFV  377 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~---------~~~~~~~~~~~-------~-~h~~~v~~~~~~~~~--~~~l~  377 (391)
                      .|..+..++.|..++..+.+|.+.++=.+         .++.....+++       . ...-.+..++|+|+.  ...|.
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~  184 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV  184 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence            57788899999999988889865554321         11111111111       0 111246778999965  45677


Q ss_pred             EeeCCCcEEEEec
Q psy2107         378 SASFDNSVKLWDL  390 (391)
Q Consensus       378 s~~~dg~v~iwdl  390 (391)
                      .-+.|..||+||+
T Consensus       185 iL~sdnviRiy~l  197 (741)
T KOG4460|consen  185 LLTSDNVIRIYSL  197 (741)
T ss_pred             EEecCcEEEEEec
Confidence            7788999999986

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=92.12  E-value=6.3  Score=32.97  Aligned_cols=167  Identities=9%  Similarity=0.013  Sum_probs=90.0

Q ss_pred             CCCCeEEEEEeCC-----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEE-ECCCCCCCC
Q psy2107         167 DGKDAAFISVSTD-----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW-SADISKERG  240 (391)
Q Consensus       167 ~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw-d~~~~~~~~  240 (391)
                      ++++.+|.+.-.|     |.|-+||.+   .....+..+..|.-.-..+.|.+||+.++.+.  |-|..- |....+...
T Consensus       122 s~dG~~LYATEndfd~~rGViGvYd~r---~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan--GGIethpdfgR~~lNl  196 (366)
T COG3490         122 SPDGRLLYATENDFDPNRGVIGVYDAR---EGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN--GGIETHPDFGRTELNL  196 (366)
T ss_pred             CCCCcEEEeecCCCCCCCceEEEEecc---cccceecccccCCcCcceeEEecCCcEEEEeC--CceecccccCccccch
Confidence            7788887765443     789999965   45566777888887888999999999888764  345443 221111100


Q ss_pred             CCCCCCCCCccccccccccccCCCCCce--eeec--CccCcccEEEeccCCeEEEEEC-CC-----eEEEEecccCceeE
Q psy2107         241 DPSENGDEGTTSKKRKKEYSSASSRTPL--ITLK--GHKEAISAVQWTAVDEIITSSW-DH-----TLKIWDAELGGMKS  310 (391)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~v~~~~~~~~~~l~s~~~-dg-----~i~iwd~~~~~~~~  310 (391)
                      +..          +.+..+.+..+...+  .++.  .+.-.|..+...+++.++.++. .|     --.+=-...++.+.
T Consensus       197 dsM----------ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~  266 (366)
T COG3490         197 DSM----------EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLE  266 (366)
T ss_pred             hhc----------CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCc
Confidence            000          000111111111111  1222  3445577777777777666543 11     11111122333433


Q ss_pred             EEECC--------eeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCC
Q psy2107         311 EIVGN--------KSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKE  348 (391)
Q Consensus       311 ~~~~~--------~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~  348 (391)
                      .+...        ..+-+++.+.+..+++..+ ..+..-+||..++.
T Consensus       267 ~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~  313 (366)
T COG3490         267 FLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDAATGA  313 (366)
T ss_pred             ccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEcCCCc
Confidence            33322        2456777776656655544 45577899998876

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=92.07  E-value=4.1  Score=36.96  Aligned_cols=61  Identities=21%  Similarity=0.282  Sum_probs=42.3

Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...++|+|+..|.|++||--...   ....+++-...|..+..+.++..+|+||-  ..+.+-|++
T Consensus       572 esGyIa~as~kGDirLyDRig~r---AKtalP~lG~aIk~idvta~Gk~ilaTCk--~yllL~d~~  632 (776)
T COG5167         572 ESGYIAAASRKGDIRLYDRIGKR---AKTALPGLGDAIKHIDVTANGKHILATCK--NYLLLTDVP  632 (776)
T ss_pred             cCceEEEecCCCceeeehhhcch---hhhcCcccccceeeeEeecCCcEEEEeec--ceEEEEecc
Confidence            45699999999999999953322   33345666778999999985655555553  466665553

>KOG2377|consensus

Probab=92.04  E-value=8.7  Score=34.43  Aligned_cols=103  Identities=11%  Similarity=0.161  Sum_probs=68.1

Q ss_pred             CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       153 ~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                      ...++|.++.|   ++|.+.+|.--.+.+|.+++...........++.+..+..|....|..+. -+|.-+..| +-+|.
T Consensus        64 ~d~G~I~SIkF---SlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~-e~A~i~~~G-~e~y~  138 (657)
T KOG2377|consen   64 DDKGEIKSIKF---SLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSST-EIAFITDQG-IEFYQ  138 (657)
T ss_pred             cCCCceeEEEe---ccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCe-eEEEEecCC-eEEEE
Confidence            45679999999   77888999999999999998632222223333344445668999998774 455555444 66666


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE  288 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  288 (391)
                      +...                            ...++..+.|...|.-..|.++..
T Consensus       139 v~pe----------------------------krslRlVks~~~nvnWy~yc~et~  166 (657)
T KOG2377|consen  139 VLPE----------------------------KRSLRLVKSHNLNVNWYMYCPETA  166 (657)
T ss_pred             Echh----------------------------hhhhhhhhhcccCccEEEEccccc
Confidence            5431                            224455566777787778875544

>PLN02153 epithiospecifier protein

Probab=91.85  E-value=8.5  Score=33.88  Aligned_cols=71  Identities=13%  Similarity=0.068  Sum_probs=36.0

Q ss_pred             EEEecCCEEEEEECC-------CeEEEEcCCCceEEeccCCC---C----CeeEEEEEecCCCCeEEEEEeCCC-----c
Q psy2107         121 AIDFHNDWILTGCYD-------HSVHIWTRRGEHKLNIPGHG---G----PVKGVAWLYNDGKDAAFISVSTDQ-----T  181 (391)
Q Consensus       121 ~~~~~~~~l~t~~~d-------g~i~iwd~~~~~~~~~~~~~---~----~v~~l~~~~~~~~~~~l~s~~~dg-----~  181 (391)
                      ++...+++++.|+.+       ..+.+||.....-.......   .    ....+.+     ++.+++.|+.++     .
T Consensus        28 ~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~-----~~~iyv~GG~~~~~~~~~  102 (341)
T PLN02153         28 IAVVGDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV-----GTKLYIFGGRDEKREFSD  102 (341)
T ss_pred             EEEECCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE-----CCEEEEECCCCCCCccCc
Confidence            334456677767653       35778887544333222111   1    1223333     566777777542     4


Q ss_pred             EEEEeecCCCCceeEEE
Q psy2107         182 AMIWEWKVESNSIECIH  198 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~  198 (391)
                      +.+||  ..+..+..+.
T Consensus       103 v~~yd--~~t~~W~~~~  117 (341)
T PLN02153        103 FYSYD--TVKNEWTFLT  117 (341)
T ss_pred             EEEEE--CCCCEEEEec
Confidence            56666  3445555443

>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases

Probab=91.71  E-value=4.2  Score=35.60  Aligned_cols=104  Identities=9%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             ccEEEeccCCeEEEEECCCeEEEEecccCce---eEEEE-----CCeeeEEEEECCC---CCEEE-EeeCC--------C
Q psy2107         278 ISAVQWTAVDEIITSSWDHTLKIWDAELGGM---KSEIV-----GNKSFFDVHYSPL---SKLVI-TASAD--------K  337 (391)
Q Consensus       278 v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---~~~~~-----~~~~i~~~~~~p~---~~~l~-~g~~d--------g  337 (391)
                      .+.|+|.|++.++++...|.|++++ ..+..   +....     .......++++|+   ..+|. +.+..        .
T Consensus         4 P~~~a~~pdG~l~v~e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~   82 (331)
T PF07995_consen    4 PRSMAFLPDGRLLVAERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDN   82 (331)
T ss_dssp             EEEEEEETTSCEEEEETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEE
T ss_pred             ceEEEEeCCCcEEEEeCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCcce
Confidence            4678999989988899999999999 44443   22221     2236789999995   23333 33311        2


Q ss_pred             cEEEEcCCCC-----CcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         338 QIRLYDPKVK-----EGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       338 ~i~iwd~~~~-----~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                      .|.-|.....     ....++..+..   ....-..|+|.| ++.++++.+..+
T Consensus        83 ~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgp-DG~LYvs~G~~~  135 (331)
T PF07995_consen   83 RVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGP-DGKLYVSVGDGG  135 (331)
T ss_dssp             EEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-T-TSEEEEEEB-TT
T ss_pred             eeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCC-CCcEEEEeCCCC
Confidence            3333433222     01112222222   234467799999 556777766543

The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....

>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea

Probab=91.61  E-value=9.8  Score=34.14  Aligned_cols=107  Identities=12%  Similarity=0.183  Sum_probs=52.8

Q ss_pred             EEEEECCCeEEEEcCCCceEEe-cc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE--EEEEecC
Q psy2107         129 ILTGCYDHSVHIWTRRGEHKLN-IP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC--IHVCRGH  203 (391)
Q Consensus       129 l~t~~~dg~i~iwd~~~~~~~~-~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~--~~~~~~~  203 (391)
                      +..+.+..++.+||+...+..+ +.  ........|.|+.+.....-++.+.-..+|..|-- ...+.+..  +..+...
T Consensus       215 ~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k-~~~g~W~a~kVi~ip~~  293 (461)
T PF05694_consen  215 LEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYK-DDDGEWAAEKVIDIPAK  293 (461)
T ss_dssp             HHHH-S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE--ETTEEEEEEEEEE--E
T ss_pred             hhcccccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEE-cCCCCeeeeEEEECCCc
Confidence            3334556799999996555443 32  22345778999874333334444445555655532 12333332  2222211


Q ss_pred             -----------------CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCC
Q psy2107         204 -----------------ERGLETVTVSESRQQFATGG-WDCLLKIWSADIS  236 (391)
Q Consensus       204 -----------------~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~  236 (391)
                                       ..-|+.|..|.|.++|.... .+|.|+.||+...
T Consensus       294 ~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP  344 (461)
T PF05694_consen  294 KVEGWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDP  344 (461)
T ss_dssp             E--SS---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred             ccCcccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence                             24578999999999987665 5899999999753

The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.

>KOG4460|consensus

Probab=91.09  E-value=11  Score=34.56  Aligned_cols=95  Identities=12%  Similarity=0.156  Sum_probs=48.8

Q ss_pred             CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      .|..+..++.|..++-.|.+|.+.++=.+.-...... ..+..       ........-...+.+ ....-.+..++|+|
T Consensus       105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~-eDgk~-------~v~CRt~~i~~~~ft-ss~~ltl~Qa~WHP  175 (741)
T KOG4460|consen  105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEF-EDGKS-------TVNCRTTPVAERFFT-SSTSLTLKQAAWHP  175 (741)
T ss_pred             EEEEEEecCCCceEEEecCCeeEEEEchhhcCcccee-cCCCc-------eEEEEeecccceeec-cCCceeeeeccccC
Confidence            5777888999999999999986554332110000000 00000       000000000001111 11223355677886


Q ss_pred             CC----eEEEEECCCeEEEEecccCcee
Q psy2107         286 VD----EIITSSWDHTLKIWDAELGGMK  309 (391)
Q Consensus       286 ~~----~l~s~~~dg~i~iwd~~~~~~~  309 (391)
                      +.    .++.-+.|..+|+||+.....+
T Consensus       176 ~S~~D~hL~iL~sdnviRiy~lS~~tel  203 (741)
T KOG4460|consen  176 SSILDPHLVLLTSDNVIRIYSLSEPTEL  203 (741)
T ss_pred             CccCCceEEEEecCcEEEEEecCCcchh
Confidence            54    5777788999999998766554

>KOG2377|consensus

Probab=91.08  E-value=6.5  Score=35.20  Aligned_cols=102  Identities=11%  Similarity=-0.003  Sum_probs=59.6

Q ss_pred             EEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107         174 ISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSK  253 (391)
Q Consensus       174 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  253 (391)
                      +.+...|.+.-|-..... ...++..-....++|.++.|++|.+.+|+--.|..|.+++....+..              
T Consensus        37 lfavrSggatgvvvkgpn-dDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~--------------  101 (657)
T KOG2377|consen   37 LFAVRSGGATGVVVKGPN-DDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQ--------------  101 (657)
T ss_pred             EEEEecCCeeEEEEeCCC-CCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchh--------------
Confidence            333445556666543222 21222222334679999999999999999999999999987432110              


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEe
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWD  302 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd  302 (391)
                                 .....+.+.....|....|..+..++..+..| +-+|-
T Consensus       102 -----------l~~~~~ck~k~~~IlGF~W~~s~e~A~i~~~G-~e~y~  138 (657)
T KOG2377|consen  102 -----------LEYTQECKTKNANILGFCWTSSTEIAFITDQG-IEFYQ  138 (657)
T ss_pred             -----------hHHHHHhccCcceeEEEEEecCeeEEEEecCC-eEEEE
Confidence                       01112223334557778888665555555444 44444

>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families

Probab=90.97  E-value=12  Score=33.96  Aligned_cols=226  Identities=11%  Similarity=0.054  Sum_probs=104.3

Q ss_pred             EEEec--CCEEEEE-ECCC----eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC---------c--E
Q psy2107         121 AIDFH--NDWILTG-CYDH----SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ---------T--A  182 (391)
Q Consensus       121 ~~~~~--~~~l~t~-~~dg----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg---------~--v  182 (391)
                      .+.++  ++++|-+ +..|    .|+++|+.+.....-.-.......+.|   .+++..|+....+.         .  |
T Consensus       128 ~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~~~~~W---~~d~~~~~y~~~~~~~~~~~~~~~~~v  204 (414)
T PF02897_consen  128 GFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKFSSVSW---SDDGKGFFYTRFDEDQRTSDSGYPRQV  204 (414)
T ss_dssp             EEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEESEEEEE---CTTSSEEEEEECSTTTSS-CCGCCEEE
T ss_pred             eeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccccccceEEE---eCCCCEEEEEEeCcccccccCCCCcEE
Confidence            44555  6666644 4444    599999954433321111111223899   66666555554333         2  5


Q ss_pred             EEEeecCCCCceeEEEEEecCCCC--eEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERG--LETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      +.|.  .++........+......  ...+..++++++|+..+..    ..+.+.++.....                  
T Consensus       205 ~~~~--~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~------------------  264 (414)
T PF02897_consen  205 YRHK--LGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGS------------------  264 (414)
T ss_dssp             EEEE--TTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTT------------------
T ss_pred             EEEE--CCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCC------------------
Confidence            5555  444433333444433332  5788899999987754332    3467777754210                  


Q ss_pred             cccccCCCCCceeeecCccCcccEEEeccCCeEEEEE----CCCeEEEEecccCce---eEEEECC-e--eeEEEEECCC
Q psy2107         257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS----WDHTLKIWDAELGGM---KSEIVGN-K--SFFDVHYSPL  326 (391)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~----~dg~i~iwd~~~~~~---~~~~~~~-~--~i~~~~~~p~  326 (391)
                             .......+......+....-+.++.++.-+    ..+.|.-.++.....   ...+..+ .  .+..+...  
T Consensus       265 -------~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~--  335 (414)
T PF02897_consen  265 -------PDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF--  335 (414)
T ss_dssp             -------SS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE--
T ss_pred             -------CcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE--
Confidence                   011222232233333322222244433332    235676777776652   2233322 2  45555543  


Q ss_pred             CCEEEE-eeCCC--cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107         327 SKLVIT-ASADK--QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       327 ~~~l~~-g~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                      +.+|+. ...++  .|+++++..+. ......+. -.+.|..+...++...+.++.+
T Consensus       336 ~~~Lvl~~~~~~~~~l~v~~~~~~~-~~~~~~~p-~~g~v~~~~~~~~~~~~~~~~s  390 (414)
T PF02897_consen  336 KDYLVLSYRENGSSRLRVYDLDDGK-ESREIPLP-EAGSVSGVSGDFDSDELRFSYS  390 (414)
T ss_dssp             TTEEEEEEEETTEEEEEEEETT-TE-EEEEEESS-SSSEEEEEES-TT-SEEEEEEE
T ss_pred             CCEEEEEEEECCccEEEEEECCCCc-EEeeecCC-cceEEeccCCCCCCCEEEEEEe
Confidence            444444 44443  68888887111 11222222 2344666666664444554444

Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=90.94  E-value=11  Score=33.43  Aligned_cols=203  Identities=12%  Similarity=0.080  Sum_probs=109.8

Q ss_pred             EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC----CCCE--EEEEe-CC---CcEE
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE----SRQQ--FATGG-WD---CLLK  229 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~~~--l~sg~-~d---g~i~  229 (391)
                      +|-.+|.+|...+++....++-+.+||+.  .   +.+..+.  .+.+..+..-.    +++.  |+.++ .+   ..|+
T Consensus        58 AIWvnp~dp~kSlIigTdK~~GL~VYdL~--G---k~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~  130 (381)
T PF02333_consen   58 AIWVNPADPAKSLIIGTDKKGGLYVYDLD--G---KELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLR  130 (381)
T ss_dssp             EEE--SS-GGG-EEEEEETTTEEEEEETT--S----EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEE
T ss_pred             cEecCCCCcccceEEEEeCCCCEEEEcCC--C---cEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEE
Confidence            34445666777788888999999999953  2   3344443  23344333321    2332  44444 22   4699


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--c-CC--eEEEEECCCeEEEEecc
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--A-VD--EIITSSWDHTLKIWDAE  304 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~--~l~s~~~dg~i~iwd~~  304 (391)
                      +|.+........                ..  .....++   ...-..+..+|+-  + .+  +.+....+|.+..|-+.
T Consensus       131 ~f~id~~~g~L~----------------~v--~~~~~p~---~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~  189 (381)
T PF02333_consen  131 LFRIDPDTGELT----------------DV--TDPAAPI---ATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELT  189 (381)
T ss_dssp             EEEEETTTTEEE----------------E---CBTTC-E---E-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEE
T ss_pred             EEEecCCCCcce----------------Ec--CCCCccc---ccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEE
Confidence            998853110000                00  0000011   1111234555553  2 23  36667788988888775


Q ss_pred             ---cC----ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc--ceEEEEecc--ccCcEEEEEECC--C
Q psy2107         305 ---LG----GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG--AIVKSTFSS--HKEWVQSVRWSP--I  371 (391)
Q Consensus       305 ---~~----~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~--~~~~~~~~~--h~~~v~~~~~~~--~  371 (391)
                         .+    +.++.+.....+..|+......+|..|-++--|.-|+.+....  ..++....+  ....|-.|+.-.  +
T Consensus       190 ~~~~g~v~~~lVR~f~~~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~  269 (381)
T PF02333_consen  190 DDGDGKVSATLVREFKVGSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSD  269 (381)
T ss_dssp             E-TTSSEEEEEEEEEE-SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CC
T ss_pred             eCCCCcEeeEEEEEecCCCcceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCC
Confidence               23    4577888888899999998888999998888888887764322  223333322  345677777643  2


Q ss_pred             -CCCEEEEeeCCCcEEEEec
Q psy2107         372 -DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       372 -~~~~l~s~~~dg~v~iwdl  390 (391)
                       .+++|+|.-.+++..|||.
T Consensus       270 g~gYLivSsQG~~sf~Vy~r  289 (381)
T PF02333_consen  270 GKGYLIVSSQGDNSFAVYDR  289 (381)
T ss_dssp             C-EEEEEEEGGGTEEEEEES
T ss_pred             CCeEEEEEcCCCCeEEEEec
Confidence             3456777777888999985

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=90.90  E-value=11  Score=33.36  Aligned_cols=94  Identities=14%  Similarity=0.151  Sum_probs=45.8

Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC----------------cEEEEcCCCCCcceEEE----
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK----------------QIRLYDPKVKEGAIVKS----  354 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg----------------~i~iwd~~~~~~~~~~~----  354 (391)
                      +..|.-+|+.+++.......+ ....+-.+++|++++.=+.|.                -|+++++..+....+..    
T Consensus       263 ~~~i~~~d~~t~~~~~~~~~p-~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~s  341 (386)
T PF14583_consen  263 DFWIAGYDPDTGERRRLMEMP-WCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTS  341 (386)
T ss_dssp             -EEEEEE-TTT--EEEEEEE--SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE----
T ss_pred             ceEEEeeCCCCCCceEEEeCC-ceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCc
Confidence            445666777777654333332 233555678888876533332                46677776544222211    


Q ss_pred             --EeccccC-cEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         355 --TFSSHKE-WVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       355 --~~~~h~~-~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                        .+.++.. .=....|+||+..+|.++...|...||=
T Consensus       342 w~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~  379 (386)
T PF14583_consen  342 WKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYL  379 (386)
T ss_dssp             ---BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEE
T ss_pred             ceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEE
Confidence              1122211 1356789998888888999999887773

>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus

Probab=90.61  E-value=13  Score=33.61  Aligned_cols=38  Identities=24%  Similarity=0.197  Sum_probs=33.1

Q ss_pred             EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEe
Q psy2107         128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLY  165 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~  165 (391)
                      .++.|..+|.|++|..++..+..-.-|..+|..+....
T Consensus        81 ~I~VG~ssG~vrfyte~G~LL~~Q~~h~~pV~~ik~~~  118 (415)
T PF14655_consen   81 CIAVGTSSGYVRFYTENGVLLLSQLLHEEPVLKIKCRS  118 (415)
T ss_pred             EEEEEecccEEEEEeccchHHHHHhcCccceEEEEecc
Confidence            78999999999999999888777777899999988843

>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length

Probab=90.60  E-value=1.1  Score=22.31  Aligned_cols=26  Identities=15%  Similarity=0.372  Sum_probs=23.0

Q ss_pred             CcEEEEEecCCEEEEEECCCeEEEEc
Q psy2107         117 DWVSAIDFHNDWILTGCYDHSVHIWT  142 (391)
Q Consensus       117 ~~V~~~~~~~~~l~t~~~dg~i~iwd  142 (391)
                      ..|.+++..+++++.+..-+.+|+|.
T Consensus         2 E~i~aia~g~~~vavaTS~~~lRifs   27 (27)
T PF12341_consen    2 EEIEAIAAGDSWVAVATSAGYLRIFS   27 (27)
T ss_pred             ceEEEEEccCCEEEEEeCCCeEEecC
Confidence            46889999999999999999999984

The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.

>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]

Probab=90.55  E-value=13  Score=33.99  Aligned_cols=66  Identities=14%  Similarity=0.172  Sum_probs=46.5

Q ss_pred             EEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         280 AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       280 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      +..-..+|++++++..|-|++||--.-.....+++ ...|..+..+.+|+++++.+ ...+.+-|++.
T Consensus       567 s~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTC-k~yllL~d~~i  633 (776)
T COG5167         567 SGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATC-KNYLLLTDVPI  633 (776)
T ss_pred             ccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEee-cceEEEEeccc
Confidence            33334678999999999999999543333333333 33788888899999887765 56777877653

>KOG2247|consensus

Probab=90.44  E-value=0.034  Score=49.09  Aligned_cols=141  Identities=11%  Similarity=0.103  Sum_probs=91.0

Q ss_pred             EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-C
Q psy2107         208 ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-V  286 (391)
Q Consensus       208 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  286 (391)
                      ....|-+.+.-++.++.+..+..||-....                               ..-.........++|.- .
T Consensus        38 i~~~w~~e~~nlavaca~tiv~~YD~agq~-------------------------------~le~n~tg~aldm~wDkeg   86 (615)
T KOG2247|consen   38 IIHRWRPEGHNLAVACANTIVIYYDKAGQV-------------------------------ILELNPTGKALDMAWDKEG   86 (615)
T ss_pred             ceeeEecCCCceehhhhhhHHHhhhhhcce-------------------------------ecccCCchhHhhhhhcccc
Confidence            345677877778888888888888864311                               11111233445667762 2


Q ss_pred             C-eEEEEECCCeEEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEE
Q psy2107         287 D-EIITSSWDHTLKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ  364 (391)
Q Consensus       287 ~-~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~  364 (391)
                      . .++.+-..+.+.+||+.+....+ .+.+...-.-+.|++.+..++.|...|.+.|++..+..   .......|...++
T Consensus        87 dvlavlAek~~piylwd~n~eytqqLE~gg~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR---~iiv~Gkh~RRgt  163 (615)
T KOG2247|consen   87 DVLAVLAEKTGPIYLWDVNSEYTQQLESGGTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSR---RIIVMGKHQRRGT  163 (615)
T ss_pred             chhhhhhhcCCCeeechhhhhhHHHHhccCcchHHHHhhccCCccccccccccceEEEeccchh---hhhhhccccccee
Confidence            2 35666778999999997643211 12222222227899989999999999999999976644   2323334899999


Q ss_pred             EEEECCCCCCEEEEeeCCCc
Q psy2107         365 SVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       365 ~~~~~~~~~~~l~s~~~dg~  384 (391)
                      +++|.+ .+ +.+.++.|..
T Consensus       164 q~av~l-Ed-~vil~dcd~~  181 (615)
T KOG2247|consen  164 QIAVTL-ED-YVILCDCDNT  181 (615)
T ss_pred             EEEecc-cc-eeeecCcHHH
Confidence            999998 43 4666666543

>PRK14131 N-acetylneuraminic acid mutarotase; Provisional

Probab=88.93  E-value=17  Score=32.58  Aligned_cols=24  Identities=8%  Similarity=-0.302  Sum_probs=13.2

Q ss_pred             EEEecCCEEEEEEC-CCeEEEEcCC
Q psy2107         121 AIDFHNDWILTGCY-DHSVHIWTRR  144 (391)
Q Consensus       121 ~~~~~~~~l~t~~~-dg~i~iwd~~  144 (391)
                      +..+.+++++.|+. +..+.++|++
T Consensus        34 ~~~~~~~iyv~gG~~~~~~~~~d~~   58 (376)
T PRK14131         34 GAIDNNTVYVGLGSAGTSWYKLDLN   58 (376)
T ss_pred             EEEECCEEEEEeCCCCCeEEEEECC
Confidence            33445665554443 4556777774

>KOG2247|consensus

Probab=88.77  E-value=0.031  Score=49.31  Aligned_cols=138  Identities=17%  Similarity=0.284  Sum_probs=93.1

Q ss_pred             EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                      -++.++.+..+..||-.++...... .++....++|   +.++. .++.+-..+.+.+||++.+.  ...+..-..|...
T Consensus        48 nlavaca~tiv~~YD~agq~~le~n-~tg~aldm~w---DkegdvlavlAek~~piylwd~n~ey--tqqLE~gg~~s~s  121 (615)
T KOG2247|consen   48 NLAVACANTIVIYYDKAGQVILELN-PTGKALDMAW---DKEGDVLAVLAEKTGPIYLWDVNSEY--TQQLESGGTSSKS  121 (615)
T ss_pred             ceehhhhhhHHHhhhhhcceecccC-CchhHhhhhh---ccccchhhhhhhcCCCeeechhhhhh--HHHHhccCcchHH
Confidence            3667777788888887666655444 3455667888   55555 44556678999999975321  1111111112222


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC
Q psy2107         207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV  286 (391)
Q Consensus       207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  286 (391)
                      .  +.|++....++.|-..|.+.+++..+.+                             .......|...++++++.+.
T Consensus       122 l--l~wsKg~~el~ig~~~gn~viynhgtsR-----------------------------~iiv~Gkh~RRgtq~av~lE  170 (615)
T KOG2247|consen  122 L--LAWSKGTPELVIGNNAGNIVIYNHGTSR-----------------------------RIIVMGKHQRRGTQIAVTLE  170 (615)
T ss_pred             H--HhhccCCccccccccccceEEEeccchh-----------------------------hhhhhcccccceeEEEeccc
Confidence            2  7789988889999899999999987633                             22233348889999999988


Q ss_pred             CeEEEEECCCeEEEEe
Q psy2107         287 DEIITSSWDHTLKIWD  302 (391)
Q Consensus       287 ~~l~s~~~dg~i~iwd  302 (391)
                      ++.+.++.|..+.+-.
T Consensus       171 d~vil~dcd~~L~v~~  186 (615)
T KOG2247|consen  171 DYVILCDCDNTLSVTT  186 (615)
T ss_pred             ceeeecCcHHHHHHhh
Confidence            9988888887766544

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=88.66  E-value=13  Score=31.01  Aligned_cols=180  Identities=13%  Similarity=0.100  Sum_probs=100.9

Q ss_pred             eEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy2107         159 KGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS  236 (391)
Q Consensus       159 ~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~  236 (391)
                      ..+.|.   .++.++-+.+.-|  .|+.+|+  .++.......+.. .---..++...+ ++....=.++...+||.++ 
T Consensus        48 QGL~~~---~~g~LyESTG~yG~S~l~~~d~--~tg~~~~~~~l~~-~~FgEGit~~~d-~l~qLTWk~~~~f~yd~~t-  119 (264)
T PF05096_consen   48 QGLEFL---DDGTLYESTGLYGQSSLRKVDL--ETGKVLQSVPLPP-RYFGEGITILGD-KLYQLTWKEGTGFVYDPNT-  119 (264)
T ss_dssp             EEEEEE---ETTEEEEEECSTTEEEEEEEET--TTSSEEEEEE-TT-T--EEEEEEETT-EEEEEESSSSEEEEEETTT-
T ss_pred             ccEEec---CCCEEEEeCCCCCcEEEEEEEC--CCCcEEEEEECCc-cccceeEEEECC-EEEEEEecCCeEEEEcccc-
Confidence            356663   3577778888777  5666664  3443333333322 222233444432 3333344678888999876 


Q ss_pred             CCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-
Q psy2107         237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-  315 (391)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-  315 (391)
                                                  .+.+..+.- .+.=..++ +++..|+.+.....++++|..+.+....+... 
T Consensus       120 ----------------------------l~~~~~~~y-~~EGWGLt-~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~  169 (264)
T PF05096_consen  120 ----------------------------LKKIGTFPY-PGEGWGLT-SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTD  169 (264)
T ss_dssp             ----------------------------TEEEEEEE--SSS--EEE-ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EE
T ss_pred             ----------------------------ceEEEEEec-CCcceEEE-cCCCEEEEECCccceEEECCcccceEEEEEEEE
Confidence                                        233444432 23345566 34456777777889999999888777666532 


Q ss_pred             --e---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec---------------cccCcEEEEEECCCCCCE
Q psy2107         316 --K---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS---------------SHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       316 --~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~---------------~h~~~v~~~~~~~~~~~~  375 (391)
                        .   .++-+.+- +|...|=.-....|...|+.++.   +...+.               ......+.+|+.|..+.+
T Consensus       170 ~g~pv~~LNELE~i-~G~IyANVW~td~I~~Idp~tG~---V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l  245 (264)
T PF05096_consen  170 NGRPVSNLNELEYI-NGKIYANVWQTDRIVRIDPETGK---VVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRL  245 (264)
T ss_dssp             TTEE---EEEEEEE-TTEEEEEETTSSEEEEEETTT-B---EEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEE
T ss_pred             CCEECCCcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCe---EEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEE
Confidence              2   34556665 46555555566778888888776   433321               013568999999978888


Q ss_pred             EEEee
Q psy2107         376 FVSAS  380 (391)
Q Consensus       376 l~s~~  380 (391)
                      ++||=
T Consensus       246 ~vTGK  250 (264)
T PF05096_consen  246 FVTGK  250 (264)
T ss_dssp             EEEET
T ss_pred             EEEeC
Confidence            88873

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs

Probab=88.55  E-value=26  Score=34.34  Aligned_cols=75  Identities=11%  Similarity=0.128  Sum_probs=49.6

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC----------CCceeEEEEE--------ecCCCCeEEEEEcCC--
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE----------SNSIECIHVC--------RGHERGLETVTVSES--  215 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~----------~~~~~~~~~~--------~~~~~~v~~l~~~~~--  215 (391)
                      -.|..|..   +++|.+++..|..|-+ |-.+...          .....| +.+        ..+...|..+.|+|.  
T Consensus        85 f~v~~i~~---n~~g~~lal~G~~~v~-V~~LP~r~g~~~~~~~g~~~i~C-rt~~v~~~~~~~~~~~~i~qv~WhP~s~  159 (717)
T PF10168_consen   85 FEVHQISL---NPTGSLLALVGPRGVV-VLELPRRWGKNGEFEDGKKEINC-RTVPVDERFFTSNSSLEIKQVRWHPWSE  159 (717)
T ss_pred             eeEEEEEE---CCCCCEEEEEcCCcEE-EEEeccccCccccccCCCcceeE-EEEEechhhccCCCCceEEEEEEcCCCC
Confidence            34666666   7889988888876644 4343211          011111 111        133457899999995  


Q ss_pred             -CCEEEEEeCCCcEEEEECCC
Q psy2107         216 -RQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       216 -~~~l~sg~~dg~i~iwd~~~  235 (391)
                       +.+|+.-..|+.+++||+..
T Consensus       160 ~~~~l~vLtsdn~lR~y~~~~  180 (717)
T PF10168_consen  160 SDSHLVVLTSDNTLRLYDISD  180 (717)
T ss_pred             CCCeEEEEecCCEEEEEecCC
Confidence             58899999999999999964

It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].

>KOG1900|consensus

Probab=88.24  E-value=6.6  Score=39.97  Aligned_cols=144  Identities=11%  Similarity=0.177  Sum_probs=83.9

Q ss_pred             eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEE--------cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         177 STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV--------SESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       177 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--------~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      +.|+.+.+|+++.. +   ....+.+-...|..+..        .|.=++++.-+.--.|.++-+..........     
T Consensus        96 TiDn~L~lWny~~~-~---e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~-----  166 (1311)
T KOG1900|consen   96 TIDNNLFLWNYESD-N---ELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELS-----  166 (1311)
T ss_pred             EeCCeEEEEEcCCC-C---ccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccc-----
Confidence            45889999998642 2   23344444555655553        2233444444444567766554322111000     


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecc----cC---c-e------------
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAE----LG---G-M------------  308 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~----~~---~-~------------  308 (391)
                                     .......+......|.|+....+|+++.++.||  .+|.+.    .+   + +            
T Consensus       167 ---------------~f~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~  229 (1311)
T KOG1900|consen  167 ---------------IFNTSFKISVDGVSVNCITYTENGRIFFAGRDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSS  229 (1311)
T ss_pred             ---------------ccccceeeecCCceEEEEEeccCCcEEEeecCC--CEEEEEEeccCchhhcccccccCchhHHHH
Confidence                           000112333445678899977889988888888  455432    11   0 0            


Q ss_pred             ----eEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         309 ----KSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       309 ----~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                          +..+.  ...+|..+++......+.+-+..|+|.+||+..
T Consensus       230 lvPs~~~~~~~~~dpI~qi~ID~SR~IlY~lsek~~v~~Y~i~~  273 (1311)
T KOG1900|consen  230 LVPSLLSVPGSSKDPIRQITIDNSRNILYVLSEKGTVSAYDIGG  273 (1311)
T ss_pred             hhhhhhcCCCCCCCcceeeEeccccceeeeeccCceEEEEEccC
Confidence                00111  123888999988888899999999999999875

>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]

Probab=87.84  E-value=2.2  Score=37.89  Aligned_cols=169  Identities=9%  Similarity=0.007  Sum_probs=91.6

Q ss_pred             ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecC-CCCeE-EEEEcCCCCEEEEEeCCCc
Q psy2107         151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGH-ERGLE-TVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       151 ~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~-~~~v~-~l~~~~~~~~l~sg~~dg~  227 (391)
                      +..-...|..+-.   .|+++.+..-+. .++.++++....-+.+.+... .+. ...|+ ++..-..|.-++.++.||-
T Consensus       216 L~~~~~~v~qllL---~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~  291 (733)
T COG4590         216 LSVPFSDVSQLLL---TPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGL  291 (733)
T ss_pred             cCCCccchHhhEE---CCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCc
Confidence            4444556666766   677876665554 678888865332222211111 110 01122 1222234556888899998


Q ss_pred             EEEE-ECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEeccc
Q psy2107         228 LKIW-SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       228 i~iw-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~  305 (391)
                      |.-| |++.+...                        ....+..++-....+..+.-... .-+++-...|++.++....
T Consensus       292 vsQWFdvr~~~~p------------------------~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~  347 (733)
T COG4590         292 VSQWFDVRRDGQP------------------------HLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTS  347 (733)
T ss_pred             eeeeeeeecCCCC------------------------cceeeeccccCcccceeeccccccceEEEEcCCCceeeeeccc
Confidence            8776 44432210                        01122222222233333322211 2277778888888877655


Q ss_pred             CceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         306 GGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       306 ~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+.+..-..-..+.-+++||.+.++++- ..|.|+++.+.+..
T Consensus       348 ~~~lL~~~~~~~~~~~~~Sp~~~~Ll~e-~~gki~~~~l~Nr~  389 (733)
T COG4590         348 EKLLLFERAYQAPQLVAMSPNQAYLLSE-DQGKIRLAQLENRN  389 (733)
T ss_pred             CcceehhhhhcCcceeeeCcccchheee-cCCceEEEEecCCC
Confidence            5444333333466678999999999875 46789999887643

>KOG3616|consensus

Probab=87.83  E-value=16  Score=35.13  Aligned_cols=67  Identities=16%  Similarity=0.387  Sum_probs=45.4

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ....++++.-+  +..++.+..||+|++|+........+.....+-..+.|   ...  -|+++..|..+.-|.
T Consensus        13 ~~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~---tnh--gl~~~tsdrr~la~~   81 (1636)
T KOG3616|consen   13 EDEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVF---TNH--GLVTATSDRRALAWK   81 (1636)
T ss_pred             ccceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceee---ecc--ceEEEeccchhheee
Confidence            44567777776  56999999999999999854433333333344445666   222  377778888888886

>KOG3522|consensus

Probab=87.65  E-value=6.9  Score=37.81  Aligned_cols=151  Identities=9%  Similarity=-0.019  Sum_probs=88.2

Q ss_pred             EEEEEECCCeEEEEcCC-C-ceEE---eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-CceeEEEEEe
Q psy2107         128 WILTGCYDHSVHIWTRR-G-EHKL---NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-NSIECIHVCR  201 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~-~-~~~~---~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~  201 (391)
                      .+..|+.+|.|.|+.-. + .+..   ........+.++.+.+.     -+..|.-||++-.+--.... ....+-..+.
T Consensus       549 Tic~gtq~ssisissss~~s~ke~~~~~~spe~~~v~~l~~ss~-----Slgagl~dgt~a~y~rap~gSwd~ep~~~~~  623 (925)
T KOG3522|consen  549 TICLGTQTSSISISSSSLDSIKEVTSEPPSPEHESVKLLLFSSG-----SLGAGLIDGTLAVYGRAPSGSWDGEPNISIP  623 (925)
T ss_pred             cccccCccceeEEeeccCCcccceeccCCCCchhhhhhhhcccc-----ccccCccCCccccccCCCCCCCCCCCccccc
Confidence            47788889999999753 2 1111   12233456667776332     25556666666554211000 0011112222


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV  281 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  281 (391)
                      .-..+|.+.++..+   ++.|+.+|.|.++...+....                          ........|...|+++
T Consensus       624 ~g~lPvrsla~~ed---~~was~gG~V~vi~~tt~~~~--------------------------~~leahqee~~~Vthm  674 (925)
T KOG3522|consen  624 TGSLPVRSLAFQED---FVWASEGGCVHVIPSTTFIRS--------------------------WDLEAHQEEAHSVTHM  674 (925)
T ss_pred             cCCccccchhhhhc---eeeeecCCceEEEechhcccc--------------------------chhHHHHhhcceEEEE
Confidence            23557777777655   778889999999998663221                          1112223466789999


Q ss_pred             EeccCCeEEEEECCCeEEEEecccCceeEEE
Q psy2107         282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEI  312 (391)
Q Consensus       282 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  312 (391)
                      .+.+.+.+++-.....+++++..+....+.+
T Consensus       675 ~~~~~gVwvafasG~~~rlfhtetl~hlqd~  705 (925)
T KOG3522|consen  675 LYLDNGVWVAFASGDEERLFHTETLWHLQDS  705 (925)
T ss_pred             EeeCCceEEEEcCCCEEEEecccccCCcccc
Confidence            9998888777777777887776655444443

>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide

Probab=87.47  E-value=3.2  Score=22.63  Aligned_cols=30  Identities=17%  Similarity=0.309  Sum_probs=22.0

Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCC--CcEEEE
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFD--NSVKLW  388 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~d--g~v~iw  388 (391)
                      ....-...+|+||+..++.++..+  |.-.||
T Consensus         7 ~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy   38 (39)
T PF07676_consen    7 SPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY   38 (39)
T ss_dssp             SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred             CCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence            445677889999777777777777  877777

WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=87.23  E-value=9.4  Score=29.70  Aligned_cols=30  Identities=7%  Similarity=0.231  Sum_probs=23.6

Q ss_pred             CcccEEEeccCC-------eEEEEECCCeEEEEeccc
Q psy2107         276 EAISAVQWTAVD-------EIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       276 ~~v~~~~~~~~~-------~l~s~~~dg~i~iwd~~~  305 (391)
                      ..+..++|+|.|       .|++.+.++.|.||.-..
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~  122 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG  122 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence            378899999743       377788999999997653

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast [])

Probab=86.57  E-value=6.9  Score=30.46  Aligned_cols=29  Identities=24%  Similarity=0.406  Sum_probs=24.1

Q ss_pred             CcEEEEEECCC-----CCCEEEEeeCCCcEEEEe
Q psy2107         361 EWVQSVRWSPI-----DPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       361 ~~v~~~~~~~~-----~~~~l~s~~~dg~v~iwd  389 (391)
                      ..|.+++|||.     ++-+|+....+|.|.||.
T Consensus        86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~  119 (173)
T PF12657_consen   86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYG  119 (173)
T ss_pred             ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEe
Confidence            37999999993     245889999999999985

The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=86.33  E-value=22  Score=31.02  Aligned_cols=12  Identities=17%  Similarity=0.551  Sum_probs=8.6

Q ss_pred             CcEEEEcCCCCC
Q psy2107         337 KQIRLYDPKVKE  348 (391)
Q Consensus       337 g~i~iwd~~~~~  348 (391)
                      ..+.+||+.+.+
T Consensus       271 ~~v~~yd~~~~~  282 (323)
T TIGR03548       271 RKILIYNVRTGK  282 (323)
T ss_pred             ceEEEEECCCCe
Confidence            358899987654

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins

Probab=85.30  E-value=29  Score=31.69  Aligned_cols=29  Identities=28%  Similarity=0.549  Sum_probs=23.7

Q ss_pred             CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         361 EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       361 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..|.+++..+ ..+++++...+|.|.+|++
T Consensus       190 ~~I~~v~~d~-~r~~ly~l~~~~~Iq~w~l  218 (422)
T PF08801_consen  190 PKIVQVAVDP-SRRLLYTLTSDGSIQVWDL  218 (422)
T ss_dssp             --EEEEEEET-TTTEEEEEESSE-EEEEEE
T ss_pred             hceeeEEecC-CcCEEEEEeCCCcEEEEEE
Confidence            3499999988 5579999999999999997

RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=85.05  E-value=22  Score=29.94  Aligned_cols=150  Identities=11%  Similarity=0.074  Sum_probs=82.0

Q ss_pred             EEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         211 TVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       211 ~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      .|+|+|.+|...-.|     |.|-+||.+.+                            ...+..+..|.-.-..+.+.+
T Consensus       120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~----------------------------fqrvgE~~t~GiGpHev~lm~  171 (366)
T COG3490         120 VFSPDGRLLYATENDFDPNRGVIGVYDAREG----------------------------FQRVGEFSTHGIGPHEVTLMA  171 (366)
T ss_pred             ccCCCCcEEEeecCCCCCCCceEEEEecccc----------------------------cceecccccCCcCcceeEEec
Confidence            489999988765433     77999998742                            224455666666667777887


Q ss_pred             CCeEEEEECC-------------------CeEEEEecccCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcE--
Q psy2107         286 VDEIITSSWD-------------------HTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQI--  339 (391)
Q Consensus       286 ~~~l~s~~~d-------------------g~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i--  339 (391)
                      ++++++....                   -++.+.|..+|.++.....+     -++..++..++|..++.+-..|.-  
T Consensus       172 DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d  251 (366)
T COG3490         172 DGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRND  251 (366)
T ss_pred             CCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCcc
Confidence            7764443322                   23444555566555444332     267778888888776665443321  


Q ss_pred             -----EEEcCCCCCcceEE----EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         340 -----RLYDPKVKEGAIVK----STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       340 -----~iwd~~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                           -.+.  .++....+    .........|-+++.+-+++...+|+-..+..-+||.
T Consensus       252 ~ppLvg~~~--~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi~da  309 (366)
T COG3490         252 LPPLVGHFR--KGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVIWDA  309 (366)
T ss_pred             CCcceeecc--CCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEEEEc
Confidence                 1110  00000000    0001122346677776655555555555566777775

>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A

Probab=85.05  E-value=27  Score=31.01  Aligned_cols=159  Identities=11%  Similarity=0.062  Sum_probs=72.8

Q ss_pred             CCceEEeccCCCCCeeEEEEEe--cCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLY--NDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA  220 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~--~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~  220 (391)
                      ++..+.++.........+-|..  ..++|+ +|+++..||.-.+|-++..+.....+....+  .......++|+++.++
T Consensus        19 TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g--~~~~g~~~s~~~~~~~   96 (386)
T PF14583_consen   19 TGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPG--DNTFGGFLSPDDRALY   96 (386)
T ss_dssp             T--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS---B-TTT-EE-TTSSEEE
T ss_pred             CCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCC--CCccceEEecCCCeEE
Confidence            4556666654443333332210  144564 5566666888888877766655444433221  2222455678888776


Q ss_pred             EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--cCCeEEEE------
Q psy2107         221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVDEIITS------  292 (391)
Q Consensus       221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~------  292 (391)
                      -......|.-.|+++.+..                             ..+......+....|.  .++..+.+      
T Consensus        97 Yv~~~~~l~~vdL~T~e~~-----------------------------~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~  147 (386)
T PF14583_consen   97 YVKNGRSLRRVDLDTLEER-----------------------------VVYEVPDDWKGYGTWVANSDCTKLVGIEISRE  147 (386)
T ss_dssp             EEETTTEEEEEETTT--EE-----------------------------EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGG
T ss_pred             EEECCCeEEEEECCcCcEE-----------------------------EEEECCcccccccceeeCCCccEEEEEEEeeh
Confidence            5555567888888774431                             1111122222223332  22222222      


Q ss_pred             -----------------ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe
Q psy2107         293 -----------------SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       293 -----------------~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g  333 (391)
                                       --.+.|.--|+.+|+....+.....+..+.|+|...-+++=
T Consensus       148 d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~dp~li~f  205 (386)
T PF14583_consen  148 DWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTDPTLIMF  205 (386)
T ss_dssp             G-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTEEEEEEE
T ss_pred             hccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCCCCEEEE
Confidence                             12234666678888877777777788889999976554443

>smart00564 PQQ beta-propeller repeat

Probab=85.00  E-value=2.7  Score=21.81  Aligned_cols=26  Identities=27%  Similarity=0.189  Sum_probs=22.0

Q ss_pred             CCeEEEEECCCeEEEEecccCceeEE
Q psy2107         286 VDEIITSSWDHTLKIWDAELGGMKSE  311 (391)
Q Consensus       286 ~~~l~s~~~dg~i~iwd~~~~~~~~~  311 (391)
                      ++.++.++.+|.+..+|.++|+.+..
T Consensus         6 ~~~v~~~~~~g~l~a~d~~~G~~~W~   31 (33)
T smart00564        6 DGTVYVGSTDGTLYALDAKTGEILWT   31 (33)
T ss_pred             CCEEEEEcCCCEEEEEEcccCcEEEE
Confidence            45788899999999999999887654

Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.

>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]

Probab=84.89  E-value=44  Score=33.24  Aligned_cols=66  Identities=11%  Similarity=0.077  Sum_probs=46.4

Q ss_pred             cCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEE----ECC----------------eeeEEEEECCCCCEEEEe
Q psy2107         275 KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEI----VGN----------------KSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       275 ~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~----------------~~i~~~~~~p~~~~l~~g  333 (391)
                      .+.|.++... -+..++.+-.||+|.++|-.+.+.+...    ...                .++..++|||.+-.++.-
T Consensus       259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~  338 (753)
T PF11635_consen  259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI  338 (753)
T ss_pred             CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence            4557777766 4456888899999999998776554443    110                123357899999888888


Q ss_pred             eCCCcEE
Q psy2107         334 SADKQIR  340 (391)
Q Consensus       334 ~~dg~i~  340 (391)
                      ..+|.+.
T Consensus       339 ~~~~~~~  345 (753)
T PF11635_consen  339 DEDGKTK  345 (753)
T ss_pred             ecCCCce
Confidence            8888855

It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.57  E-value=4.8  Score=38.16  Aligned_cols=69  Identities=14%  Similarity=0.152  Sum_probs=41.8

Q ss_pred             CCeEEEEEeCCCcEEEEeecC---CCCceeEEEEEecC--------------------CCCeEEEEEcC----CCCEEEE
Q psy2107         169 KDAAFISVSTDQTAMIWEWKV---ESNSIECIHVCRGH--------------------ERGLETVTVSE----SRQQFAT  221 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~---~~~~~~~~~~~~~~--------------------~~~v~~l~~~~----~~~~l~s  221 (391)
                      +...++.+..||.+.......   ........ .+..+                    ...+..++++.    +..++++
T Consensus       157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t  235 (547)
T PF11715_consen  157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEE-LFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT  235 (547)
T ss_dssp             SSSBEEEEESSS-EEEEEES----SSS-EE-----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred             CCCEEEEEECCCCeEEEECCcccCCCCeeEEE-EeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence            455788888999998887653   11111111 11111                    23455666666    6789999


Q ss_pred             EeCCCcEEEEECCCCCC
Q psy2107         222 GGWDCLLKIWSADISKE  238 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~  238 (391)
                      .+.|+.+|+||+.+++.
T Consensus       236 l~~D~~LRiW~l~t~~~  252 (547)
T PF11715_consen  236 LSRDHTLRIWSLETGQC  252 (547)
T ss_dssp             EETTSEEEEEETTTTCE
T ss_pred             EeCCCeEEEEECCCCeE
Confidence            99999999999998776

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family

Probab=84.55  E-value=45  Score=33.10  Aligned_cols=54  Identities=17%  Similarity=0.165  Sum_probs=37.6

Q ss_pred             CCeEEEEecccCceeEEEEC-Ceee---------EEEEECC-CCC---EEEEeeCCCcEEEEcCCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVG-NKSF---------FDVHYSP-LSK---LVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~-~~~i---------~~~~~~p-~~~---~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+.|.-.|.++|+....++. +..+         .-+.+.. +|+   .++.++.+|.++++|-++++
T Consensus       413 ~~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~  480 (764)
T TIGR03074       413 SSSLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGE  480 (764)
T ss_pred             cceEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCC
Confidence            46677788999998877764 2211         1122222 553   78899999999999988876

This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.

>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates

Probab=84.51  E-value=3.7  Score=38.85  Aligned_cols=30  Identities=23%  Similarity=0.436  Sum_probs=21.3

Q ss_pred             cEEEEEECC---CCCCEEEEeeCCCcEEEEecC
Q psy2107         362 WVQSVRWSP---IDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       362 ~v~~~~~~~---~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+..+++++   ++..++++.+.|+++|+||++
T Consensus       216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~  248 (547)
T PF11715_consen  216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLE  248 (547)
T ss_dssp             -EEEEEE-----ETTTEEEEEETTSEEEEEETT
T ss_pred             ccceEEEecceeCCCCEEEEEeCCCeEEEEECC
Confidence            455555554   255689999999999999984

The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.

>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2

Probab=84.42  E-value=23  Score=29.62  Aligned_cols=123  Identities=8%  Similarity=-0.002  Sum_probs=71.7

Q ss_pred             EEEEEecCCC-CeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         196 CIHVCRGHER-GLETVTVSESRQQFATGGWDC--LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       196 ~~~~~~~~~~-~v~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      .+..+..... -...+.|..++.++-+.+.-|  .|+.+|+.+++...                           ...+.
T Consensus        35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~---------------------------~~~l~   87 (264)
T PF05096_consen   35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQ---------------------------SVPLP   87 (264)
T ss_dssp             EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEE---------------------------EEE-T
T ss_pred             EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEE---------------------------EEECC
Confidence            3444442222 345677767888888887766  68889998755321                           11111


Q ss_pred             CccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      . .---..++...+......=.++...+||..+.+.+.++.....-+.++  .+++.|+.......++++|+.+.+
T Consensus        88 ~-~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~  160 (264)
T PF05096_consen   88 P-RYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFK  160 (264)
T ss_dssp             T-T--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE-SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-S
T ss_pred             c-cccceeEEEECCEEEEEEecCCeEEEEccccceEEEEEecCCcceEEE--cCCCEEEEECCccceEEECCcccc
Confidence            0 000112222332233333457889999999999999998877667777  457777777777889999987654

3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.

>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family

Probab=84.33  E-value=28  Score=30.63  Aligned_cols=12  Identities=0%  Similarity=0.119  Sum_probs=8.7

Q ss_pred             CCCEEEEeeCCC
Q psy2107         372 DPQLFVSASFDN  383 (391)
Q Consensus       372 ~~~~l~s~~~dg  383 (391)
                      ++.+++.|+.+.
T Consensus       321 ~~~iyv~GG~~~  332 (346)
T TIGR03547       321 NNGVLLIGGENS  332 (346)
T ss_pred             CCEEEEEeccCC
Confidence            667888888764

Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.

>PF13449 Phytase-like: Esterase-like activity of phytase

Probab=84.04  E-value=28  Score=30.40  Aligned_cols=160  Identities=15%  Similarity=0.152  Sum_probs=81.2

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCc------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCL------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA  277 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (391)
                      -+.+..|.+.+++..+++.+.+|.      +..+++.......        ............ .....+.   ....-.
T Consensus        19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~L~-~~~G~~~---~~~~~D   86 (326)
T PF13449_consen   19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGI--------GGVTILDMIPLR-DPDGQPF---PKNGLD   86 (326)
T ss_pred             cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCc--------cceEeccceecc-CCCCCcC---CcCCCC
Confidence            456788999876667777788887      6666654311000        000000000000 0000111   001113


Q ss_pred             ccEEEeccCCeEEEEEC-C------CeEEEEecccCceeEEEE----------------CCeeeEEEEECCCCCEEEEee
Q psy2107         278 ISAVQWTAVDEIITSSW-D------HTLKIWDAELGGMKSEIV----------------GNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       278 v~~~~~~~~~~l~s~~~-d------g~i~iwd~~~~~~~~~~~----------------~~~~i~~~~~~p~~~~l~~g~  334 (391)
                      ..+|++.+++.++.++. +      ..|..++.. |+....+.                .+..+-.++++|+|+.|+++.
T Consensus        87 ~Egi~~~~~g~~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~  165 (326)
T PF13449_consen   87 PEGIAVPPDGSFWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAM  165 (326)
T ss_pred             hhHeEEecCCCEEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEE
Confidence            45677765555555544 4      578888866 65544442                223678999999999666653


Q ss_pred             C-----CC--c-------EEEE--cCCCCC--cceEEEEecc-----ccCcEEEEEECCCCCCEEE
Q psy2107         335 A-----DK--Q-------IRLY--DPKVKE--GAIVKSTFSS-----HKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       335 ~-----dg--~-------i~iw--d~~~~~--~~~~~~~~~~-----h~~~v~~~~~~~~~~~~l~  377 (391)
                      .     |+  .       ++++  |..+..  .......+..     ....|+.+.+.+++ .+|+
T Consensus       166 E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~-~lLv  230 (326)
T PF13449_consen  166 ESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDG-RLLV  230 (326)
T ss_pred             CccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCC-cEEE
Confidence            2     22  1       4454  443311  1122223332     34678899998844 4443

>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein

Probab=83.60  E-value=29  Score=30.21  Aligned_cols=107  Identities=12%  Similarity=0.093  Sum_probs=51.6

Q ss_pred             EEEecCCEEEEEECCC-----eEEEEcCCCceE----EeccCCCCC---eeEEEEEecCCCCeEEEEEeCC-----CcEE
Q psy2107         121 AIDFHNDWILTGCYDH-----SVHIWTRRGEHK----LNIPGHGGP---VKGVAWLYNDGKDAAFISVSTD-----QTAM  183 (391)
Q Consensus       121 ~~~~~~~~l~t~~~dg-----~i~iwd~~~~~~----~~~~~~~~~---v~~l~~~~~~~~~~~l~s~~~d-----g~v~  183 (391)
                      ++...+.+++.|+.++     .+..+|+....-    ..+..-..+   ..++.+     ++.+.+.|+..     ..+.
T Consensus        68 ~~~~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-----~~~iYv~GG~~~~~~~~~v~  142 (323)
T TIGR03548        68 SVSVENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-----DGTLYVGGGNRNGKPSNKSY  142 (323)
T ss_pred             EEEECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-----CCEEEEEeCcCCCccCceEE
Confidence            3445566777777653     566667633221    222211111   122222     45666666642     3466


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc----EEEEECCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL----LKIWSADI  235 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~----i~iwd~~~  235 (391)
                      .||  ..+..+..+..+.... .....+...++++.+.|+.++.    +.+||.++
T Consensus       143 ~yd--~~~~~W~~~~~~p~~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~  195 (323)
T TIGR03548       143 LFN--LETQEWFELPDFPGEP-RVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKK  195 (323)
T ss_pred             EEc--CCCCCeeECCCCCCCC-CCcceEEEECCEEEEEcCCCCccccceEEEecCC
Confidence            666  4455565544332211 1112222335667777776543    45677655

Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.

>PF01011 PQQ: PQQ enzyme repeat family

Probab=82.95  E-value=4.2  Score=22.14  Aligned_cols=30  Identities=17%  Similarity=0.110  Sum_probs=25.0

Q ss_pred             CeEEEEECCCeEEEEecccCceeEEEECCe
Q psy2107         287 DEIITSSWDHTLKIWDAELGGMKSEIVGNK  316 (391)
Q Consensus       287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  316 (391)
                      +.++.++.+|.|.-.|.++|+.+..++...
T Consensus         1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~   30 (38)
T PF01011_consen    1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGP   30 (38)
T ss_dssp             TEEEEETTTSEEEEEETTTTSEEEEEESSS
T ss_pred             CEEEEeCCCCEEEEEECCCCCEEEeeeCCC
Confidence            356777999999999999999998887543

; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....

>PLN02153 epithiospecifier protein

Probab=82.69  E-value=33  Score=30.17  Aligned_cols=12  Identities=17%  Similarity=0.648  Sum_probs=8.8

Q ss_pred             CcEEEEcCCCCC
Q psy2107         337 KQIRLYDPKVKE  348 (391)
Q Consensus       337 g~i~iwd~~~~~  348 (391)
                      ..+.+||+.+.+
T Consensus       217 ~~v~~yd~~~~~  228 (341)
T PLN02153        217 NAVQFFDPASGK  228 (341)
T ss_pred             CceEEEEcCCCc
Confidence            468889987654

>PLN00033 photosystem II stability/assembly factor; Provisional

Probab=82.66  E-value=37  Score=30.66  Aligned_cols=109  Identities=12%  Similarity=0.016  Sum_probs=64.7

Q ss_pred             cCcccEEEeccCCeEEEEECCCeEEEEecccCc-----eeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         275 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGG-----MKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       275 ~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ...+..+.+.+++.++.++.+|.+.. ....++     ........   ..+..+.+.+++..+++| ..|.+.... ..
T Consensus       280 ~~~l~~v~~~~dg~l~l~g~~G~l~~-S~d~G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~  356 (398)
T PLN00033        280 ARRIQNMGWRADGGLWLLTRGGGLYV-SKGTGLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DG  356 (398)
T ss_pred             ccceeeeeEcCCCCEEEEeCCceEEE-ecCCCCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CC
Confidence            45578888887788777778887654 333343     12222222   358889999888877766 577766654 23


Q ss_pred             CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ++.......-..-......+.|.+ +++ ....+.+|.|.-|
T Consensus       357 G~tW~~~~~~~~~~~~ly~v~f~~-~~~-g~~~G~~G~il~~  396 (398)
T PLN00033        357 GKSWKRDKGADNIAANLYSVKFFD-DKK-GFVLGNDGVLLRY  396 (398)
T ss_pred             CcceeEccccCCCCcceeEEEEcC-CCc-eEEEeCCcEEEEe
Confidence            332112111122345678999876 444 4445667887655

>COG5308 NUP170 Nuclear pore complex subunit [Intracellular trafficking and secretion]

Probab=82.57  E-value=54  Score=32.55  Aligned_cols=165  Identities=12%  Similarity=0.109  Sum_probs=77.6

Q ss_pred             ECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCC-----CeEEEEEeCCCcEEEEeecCCCCceeEE-----EEEe
Q psy2107         133 CYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGK-----DAAFISVSTDQTAMIWEWKVESNSIECI-----HVCR  201 (391)
Q Consensus       133 ~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~~~~  201 (391)
                      +.|+.+.+|+.. +.....+......|..|+.....++     -..++..+....+.++-+...+.+.+.-     ....
T Consensus        99 T~dnkLiLWnynn~neyq~idd~shtIlkVkLvrPkantFvs~i~hlL~vAT~~e~~ilgvs~d~~T~Els~fnTgl~vs  178 (1263)
T COG5308          99 TNDNKLILWNYNNSNEYQEIDDFSHTILKVKLVRPKANTFVSRISHLLFVATEKEVMILGVSKDTKTGELSLFNTGLVVS  178 (1263)
T ss_pred             EcCCEEEEEecCCCcchhhhhhhhhheeEEEEeccCCcccHHhhhhhhhhhhhheeeEEEEEeccccceeEEEecceEEe
Confidence            467899999984 4444444444445555554322221     0111112223344444433333222211     0111


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc-eeeecCccCcccE
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP-LITLKGHKEAISA  280 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~  280 (391)
                      ...-.|.|+.-+.+|+.+++|-.|  +.+|.+.......-....-... ...+.     ...+.-| ...+.-|...|..
T Consensus       179 vqGinV~civs~e~GrIFf~g~~d--~nvyEl~Y~~sd~wfnskcski-clTkS-----~l~sllPs~~~~~ipgetI~Q  250 (1263)
T COG5308         179 VQGINVRCIVSEEDGRIFFGGEND--PNVYELVYKSSDSWFNSKCSKI-CLTKS-----ILSSLLPSFFSFGIPGETIKQ  250 (1263)
T ss_pred             ccCceeEEEEeccCCcEEEecCCC--CCeEEEEEeccchhhhhhhhcc-CCcHH-----HHHhhcccccccCCcccchhh
Confidence            223468888888889988888877  6778764322111000000000 00000     0000001 1122235566777


Q ss_pred             EEec-cCCeEEEEECCCeEEEEeccc
Q psy2107         281 VQWT-AVDEIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       281 ~~~~-~~~~l~s~~~dg~i~iwd~~~  305 (391)
                      ++.. ..+.+.+-+....|+-|.+..
T Consensus       251 l~vDqsRg~ly~Lr~kS~Vray~itk  276 (1263)
T COG5308         251 LAVDQSRGLLYVLRKKSAVRAYSITK  276 (1263)
T ss_pred             eeecccccceeeecccceeeeEeeec
Confidence            7777 445677777777777776643

>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat

Probab=82.31  E-value=6.4  Score=21.67  Aligned_cols=24  Identities=8%  Similarity=0.235  Sum_probs=17.1

Q ss_pred             CCCCEEEEee-CCCcEEEEcCCCCC
Q psy2107         325 PLSKLVITAS-ADKQIRLYDPKVKE  348 (391)
Q Consensus       325 p~~~~l~~g~-~dg~i~iwd~~~~~  348 (391)
                      |++++|.++. .++.|.++|..+..
T Consensus         1 pd~~~lyv~~~~~~~v~~id~~~~~   25 (42)
T TIGR02276         1 PDGTKLYVTNSGSNTVSVIDTATNK   25 (42)
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCe
Confidence            5677666544 57899999986654

This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=81.05  E-value=19  Score=26.40  Aligned_cols=115  Identities=13%  Similarity=0.025  Sum_probs=70.3

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec---c
Q psy2107         209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT---A  285 (391)
Q Consensus       209 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~  285 (391)
                      .-.|......|++++.-|+|.|++.........                     .....+..+. -...|++++-.   +
T Consensus         3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~---------------------~~~~~i~~LN-in~~italaaG~l~~   60 (136)
T PF14781_consen    3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTG---------------------RQDSDISFLN-INQEITALAAGRLKP   60 (136)
T ss_pred             EEEeCCCceeEEEEecCCEEEEECCCccccccc---------------------cccCceeEEE-CCCceEEEEEEecCC
Confidence            345666666788899999999998865332110                     0122333333 34556666543   2


Q ss_pred             C-C-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECC----CCCEEEEeeCCCcEEEEcCCC
Q psy2107         286 V-D-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP----LSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       286 ~-~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p----~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      + + -++.-+....+..||+....-+.....+..+.++.+..    ...++++|+ +..|.-||...
T Consensus        61 ~~~~D~LliGt~t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGG-ncsi~Gfd~~G  126 (136)
T PF14781_consen   61 DDGRDCLLIGTQTSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGG-NCSIQGFDYEG  126 (136)
T ss_pred             CCCcCEEEEeccceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECc-eEEEEEeCCCC
Confidence            1 2 24444456789999999887776666677777777632    234555554 77788887653

>PRK13684 Ycf48-like protein; Provisional

Probab=81.05  E-value=38  Score=29.75  Aligned_cols=109  Identities=9%  Similarity=0.011  Sum_probs=59.7

Q ss_pred             cCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         275 KEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       275 ~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      ...+..+.+.+++.++..+..|.+..-.-..++.-....  ....+.++.+.++++.+++|. .|.+++=....+.....
T Consensus       172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~~  250 (334)
T PRK13684        172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWSK  250 (334)
T ss_pred             cceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEec-CCEEEEccCCCCCcccc
Confidence            446778888888877777777766532111122222222  234788999999998877764 56654322223221111


Q ss_pred             EEEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         353 KSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       353 ~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      ...- ..-...+.++.+.| ++.+ ..++.+|.+.
T Consensus       251 ~~~~~~~~~~~l~~v~~~~-~~~~-~~~G~~G~v~  283 (334)
T PRK13684        251 PIIPEITNGYGYLDLAYRT-PGEI-WAGGGNGTLL  283 (334)
T ss_pred             ccCCccccccceeeEEEcC-CCCE-EEEcCCCeEE
Confidence            1100 11123578889988 4444 4455566554

>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3

Probab=80.91  E-value=40  Score=30.00  Aligned_cols=197  Identities=12%  Similarity=0.102  Sum_probs=105.4

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEec-CCCCeE--EEEEe-CC---CcEEEEeecCCCCceeEEE
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYN-DGKDAA--FISVS-TD---QTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~-~~~~~~--l~s~~-~d---g~v~iwd~~~~~~~~~~~~  198 (391)
                      ..+++....++-+.+||++++.+..+.  .+..+.+..... .-.+..  |+.++ .+   .+|++|.++........+.
T Consensus        68 kSlIigTdK~~GL~VYdL~Gk~lq~~~--~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~L~~v~  145 (381)
T PF02333_consen   68 KSLIIGTDKKGGLYVYDLDGKELQSLP--VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGELTDVT  145 (381)
T ss_dssp             G-EEEEEETTTEEEEEETTS-EEEEE---SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTEEEE-C
T ss_pred             cceEEEEeCCCCEEEEcCCCcEEEeec--CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCcceEcC
Confidence            448888888999999999999998775  244554444211 002221  33333 32   4799998764333222211


Q ss_pred             ----EEecCCCCeEEEEE--cC-CCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         199 ----VCRGHERGLETVTV--SE-SRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       199 ----~~~~~~~~v~~l~~--~~-~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                          .+......+..+|+  ++ ++. +.+....+|.+..|.+.....-                      ....+.++.
T Consensus       146 ~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g----------------------~v~~~lVR~  203 (381)
T PF02333_consen  146 DPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDG----------------------KVSATLVRE  203 (381)
T ss_dssp             BTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTS----------------------SEEEEEEEE
T ss_pred             CCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCC----------------------cEeeEEEEE
Confidence                01111234666776  33 344 5667788999998888531110                      001234555


Q ss_pred             ecCccCcccEEEec-cCCeEEEEECCCeEEEEecccC-----ceeEEEECC---eeeEEEEE--CCCCC-EEEEe-eCCC
Q psy2107         271 LKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELG-----GMKSEIVGN---KSFFDVHY--SPLSK-LVITA-SADK  337 (391)
Q Consensus       271 ~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~-----~~~~~~~~~---~~i~~~~~--~p~~~-~l~~g-~~dg  337 (391)
                      +.. .+.+..+... ..+.|+.+-.+.-|.-|+.+-.     ..+......   ..+-.+++  .++++ ||+++ -.++
T Consensus       204 f~~-~sQ~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~  282 (381)
T PF02333_consen  204 FKV-GSQPEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDN  282 (381)
T ss_dssp             EE--SS-EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGT
T ss_pred             ecC-CCcceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCC
Confidence            554 3466777777 5678999999988888887622     222222221   24555555  34443 55544 4567


Q ss_pred             cEEEEcCCCC
Q psy2107         338 QIRLYDPKVK  347 (391)
Q Consensus       338 ~i~iwd~~~~  347 (391)
                      +..||+.+..
T Consensus       283 sf~Vy~r~~~  292 (381)
T PF02333_consen  283 SFAVYDREGP  292 (381)
T ss_dssp             EEEEEESSTT
T ss_pred             eEEEEecCCC
Confidence            8999997643

1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.

>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal

Probab=80.45  E-value=20  Score=26.29  Aligned_cols=106  Identities=8%  Similarity=0.129  Sum_probs=61.4

Q ss_pred             EEecCC--EEEEEECCCeEEEEcCCCc--------eEEeccCCCCCeeEEEEEecC--CCCeEEEEEeCCCcEEEEeecC
Q psy2107         122 IDFHND--WILTGCYDHSVHIWTRRGE--------HKLNIPGHGGPVKGVAWLYND--GKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       122 ~~~~~~--~l~t~~~dg~i~iwd~~~~--------~~~~~~~~~~~v~~l~~~~~~--~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      -.|+|.  .|++++.-|.|.|++....        ....+..-...|++++--+..  .....|+.|+ ...+..||+..
T Consensus         4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV~~   82 (136)
T PF14781_consen    4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDVEN   82 (136)
T ss_pred             EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEccc
Confidence            356643  7888889999999987321        112333456778888776643  2344666665 55789999653


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcC----CCCEEEEEeCCCcEEEEECC
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSE----SRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~----~~~~l~sg~~dg~i~iwd~~  234 (391)
                      ...  ...   +.-.+.|.++.+-.    ...++++| .+..|.-||.+
T Consensus        83 N~d--~Fy---ke~~DGvn~i~~g~~~~~~~~l~ivG-Gncsi~Gfd~~  125 (136)
T PF14781_consen   83 NSD--LFY---KEVPDGVNAIVIGKLGDIPSPLVIVG-GNCSIQGFDYE  125 (136)
T ss_pred             Cch--hhh---hhCccceeEEEEEecCCCCCcEEEEC-ceEEEEEeCCC
Confidence            221  111   22246677777633    23344444 44566666654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	391
2ymu_A	577	Structure Of A Highly Repetitive Propeller Structur		7e-15
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		4e-14
2ovp_B	445	Structure Of The Skp1-Fbw7 Complex Length = 445		6e-04
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		7e-13
2cnx_A	315	Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.		2e-12
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		7e-13
2co0_A	315	Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs		2e-12
2h9l_A	329	Wdr5delta23 Length = 329		7e-13
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		8e-13
3n0e_A	315	Crystal Structure Of Wdr5 Mutant (W330y) Length = 3		4e-12
2g99_A	308	Structural Basis For The Specific Recognition Of Me		8e-13
2g99_A	308	Structural Basis For The Specific Recognition Of Me		5e-12
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		8e-13
2g9a_A	311	Structural Basis For The Specific Recognition Of Me		4e-12
2gnq_A	336	Structure Of Wdr5 Length = 336		8e-13
3emh_A	318	Structural Basis Of Wdr5-Mll Interaction Length = 3		8e-13
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		8e-13
3n0d_A	315	Crystal Structure Of Wdr5 Mutant (W330f) Length = 3		4e-12
2xl2_A	334	Wdr5 In Complex With An Rbbp5 Peptide Recruited To		8e-13
3psl_A	318	Fine-Tuning The Stimulation Of Mll1 Methyltransfera		8e-13
4a7j_A	318	Symmetric Dimethylation Of H3 Arginine 2 Is A Novel		8e-13
3smr_A	312	Crystal Structure Of Human Wd Repeat Domain 5 With		8e-13
2h68_A	312	Histone H3 Recognition And Presentation By The Wdr5		9e-13
2h9m_A	313	Wdr5 In Complex With Unmodified H3k4 Peptide Length		9e-13
2h13_A	317	Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length		9e-13
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		1e-12
3mxx_A	315	Crystal Structure Of Wdr5 Mutant (S62a) Length = 31		6e-12
1nex_B	464	Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp		1e-12
3mks_B	464	Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH		2e-12
3zey_7	318	High-resolution Cryo-electron Microscopy Structure		2e-12
2xzm_R	343	Crystal Structure Of The Eukaryotic 40s Ribosomal S		2e-10
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		6e-10
1vyh_C	410	Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410		5e-07
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		5e-09
1p22_A	435	Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex		2e-06
3fm0_A	345	Crystal Structure Of Wd40 Protein Ciao1 Length = 34		8e-09
4a11_B	408	Structure Of The Hsddb1-Hscsa Complex Length = 408		1e-08
2bcj_B	340	Crystal Structure Of G Protein-coupled Receptor Kin		4e-08
3rfg_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		4e-08
3rfh_A	319	Crystal Structure Of The Yeast Rack1 Dimer In Space		4e-08
3sn6_B	351	Crystal Structure Of The Beta2 Adrenergic Receptor-		4e-08
1gg2_B	340	G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet		4e-08
1trj_A	314	Homology Model Of Yeast Rack1 Protein Fitted Into 1		4e-08
3izb_a	319	Localization Of The Small Subunit Ribosomal Protein		4e-08
3jyv_R	313	Structure Of The 40s Rrna And Proteins And PE TRNA		4e-08
1a0r_B	340	Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-		4e-08
1got_B	340	Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer		5e-08
3frx_A	319	Crystal Structure Of The Yeast Orthologue Of Rack1,		1e-07
1erj_A	393	Crystal Structure Of The C-Terminal Wd40 Domain Of		2e-07
2pbi_B	354	The Multifunctional Nature Of Gbeta5RGS9 REVEALED F		4e-07
3iz6_a	380	Localization Of The Small Subunit Ribosomal Protein		4e-07
3shf_A	1256	Crystal Structure Of The R265s Mutant Of Full-Lengt		8e-07
3sfz_A	1249	Crystal Structure Of Full-Length Murine Apaf-1 Leng		8e-07
3dm0_A	694	Maltose Binding Protein Fusion With Rack1 From A. T		9e-07
3cfv_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-06
3cfs_B	414	Structural Basis Of The Interaction Of Rbap46RBAP48		2e-06
3ow8_A	321	Crystal Structure Of The Wd Repeat-Containing Prote		6e-06
2hes_X	330	Cytosolic Iron-sulphur Assembly Protein- 1 Length =		6e-06
4aow_A	340	Crystal Structure Of The Human Rack1 Protein At A R		7e-06
2zkq_a	317	Structure Of A Mammalian Ribosomal 40s Subunit With		7e-06
3gfc_A	425	Crystal Structure Of Histone-Binding Protein Rbbp4		2e-05
2yba_A	422	Crystal Structure Of Nurf55 In Complex With Histone		2e-05
2b4e_A	402	Crystal Structure Of Murine Coronin-1: Monoclinic F		2e-05
3c99_A	432	Structural Basis Of Histone H4 Recognition By P55 L		2e-05
2xyi_A	430	Crystal Structure Of Nurf55 In Complex With A H4 Pe		2e-05
3mkq_A	814	Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco		2e-05
2ynp_A	604	Yeast Betaprime Cop 1-604 With Ktktn Motif Length =		3e-05
2aq5_A	402	Crystal Structure Of Murine Coronin-1 Length = 402		3e-05
3iza_B	1263	Structure Of An Apoptosome-Procaspase-9 Card Comple		4e-05
2yno_A	310	Yeast Betaprime Cop 1-304h6 Length = 310		5e-05
2ynn_A	304	Yeast Betaprime Cop 1-304 With Ktktn Motif Length =		5e-05
3odt_A	313	Crystal Structure Of Wd40 Beta Propeller Domain Of		2e-04

>pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 46/263 (17%)
Query: 129 ILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK 188
           I +   D +V +W R G+H   + GH   V GVA    DG+  A  S S D+T  +W   
Sbjct: 318 IASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVA-FSPDGQTIA--SASDDKTVKLWN-- 372
Query: 189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE 248
               + + +    GH   +  V  S   Q  A+   D  +K+W           + NG  
Sbjct: 373 ---RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW-----------NRNGQ- 417
Query: 249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGG 307
                              L TL GH  ++  V ++  D+ I S S D T+K+W+   G 
Sbjct: 418 ------------------LLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQ 458
Query: 308 MKSEIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366
           +   + G + S   V +SP  + + +AS DK ++L++   + G +++ T + H   V+ V
Sbjct: 459 LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN---RNGQLLQ-TLTGHSSSVRGV 514
Query: 367 RWSPIDPQLFVSASFDNSVKLWD 389
            +SP D Q   SAS D +VKLW+
Sbjct: 515 AFSP-DGQTIASASDDKTVKLWN 536

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/295 (22%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 115 HDDWV-SAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
           HDD V + + F  + I++G  D+++ +W+   G+    + GH G V    W  +  +D  
Sbjct: 117 HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV----W-SSQMRDNI 171
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
            IS STD+T  +W     + + ECIH   GH   +  + + E R    +G  D  L++W 
Sbjct: 172 IISGSTDRTLKVWN----AETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWD 225
Query: 233 ADISKERGDPSENGDEGTTSKKRKKEYSSAS----------------SRTPLITLKGHKE 276
            +  +       +   G  +  R  +Y                    + T L TL+GH  
Sbjct: 226 IETGQ-----CLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN 280
Query: 277 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD 336
            + ++Q+  +  +++ S D ++++WD E G     + G++S           ++++ +AD
Sbjct: 281 RVYSLQFDGI-HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS-GMELKDNILVSGNAD 338
Query: 337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
             ++++D K  +        + H+  V  +++   +    +++S D +VKLWDL+
Sbjct: 339 STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF---NKNFVITSSDDGTVKLWDLK 390

>pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 271 LKGHKE-AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS-K 328
           LKGH +  I+ +Q+   + I++ S D+TLK+W A  G     +VG+     V  S +   
Sbjct: 114 LKGHDDHVITCLQFCG-NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRDN 170
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
           ++I+ S D+ +++++ +  E      T   H     +VR   +  +  VS S D ++++W
Sbjct: 171 IIISGSTDRTLKVWNAETGECI---HTLYGH---TSTVRCMHLHEKRVVSGSRDATLRVW 224
Query: 389 DL 390
           D+
Sbjct: 225 DI 226

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 6   QSKPTPVKPNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 65
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 66  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 118
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW                                +   L TL 
Sbjct: 119 NPQSNLIVSGSFDESVRIW-----------------------------DVKTGMCLKTLP 149
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 150 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 209
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 210 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 266
Query: 388 WDLR 391
           W+L+
Sbjct: 267 WNLQ 270

>pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 268 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP 325
           + TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S 
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 78
Query: 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385
            S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV
Sbjct: 79  DSNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESV 134
Query: 386 KLWDLR 391
           ++WD++
Sbjct: 135 RIWDVK 140

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 6   QSKPTPVKPNYALMFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 65
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 66  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 118
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW                                +   L TL 
Sbjct: 119 NPQSNLIVSGSFDESVRIW-----------------------------DVKTGMCLKTLP 149
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 150 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 209
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 210 ILAATLDNDLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYI 266
Query: 388 WDLR 391
           W+L+
Sbjct: 267 WNLQ 270

>pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 268 LITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP 325
           + TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S 
Sbjct: 19  MFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 78
Query: 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385
            S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV
Sbjct: 79  DSNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESV 134
Query: 386 KLWDLR 391
           ++WD++
Sbjct: 135 RIWDVK 140

>pdb|2H9L|A Chain A, Wdr5delta23 Length = 329

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 20  QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 79
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 80  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 132
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 133 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 163
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 164 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 223
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 224 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 280
Query: 388 WDLR 391
           W+L+
Sbjct: 281 WNLQ 284

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 115 HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   VS++ F  + +W+ +   D  + IW    G+ +  I GH   +  VAW        
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSN 81
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
             +S S D+T  IW+     +S +C+   +GH   +     +       +G +D  ++IW
Sbjct: 82  LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II 290
                K                              L TL  H + +SAV +      I+
Sbjct: 138 DVKTGK-----------------------------CLKTLPAHSDPVSAVHFNRDGSLIV 168
Query: 291 TSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +SS+D   +IWD   G     ++   N     V +SP  K ++ A+ D  ++L+D    +
Sbjct: 169 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD--YSK 226
Query: 349 GAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           G  +K T++ HK  ++     +S    +  VS S DN V +W+L+
Sbjct: 227 GKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 270

>pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL 326
            TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 79
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
           S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV+
Sbjct: 80  SNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 135
Query: 387 LWDLR 391
           +WD++
Sbjct: 136 IWDVK 140

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 115 HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   VS++ F  + +W+ +   D  + IW    G+ +  I GH   +  VAW        
Sbjct: 18  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSN 74
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
             +S S D+T  IW+     +S +C+   +GH   +     +       +G +D  ++IW
Sbjct: 75  LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 130
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II 290
                K                              L TL  H + +SAV +      I+
Sbjct: 131 DVKTGK-----------------------------CLKTLPAHSDPVSAVHFNRDGSLIV 161
Query: 291 TSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +SS+D   +IWD   G     ++   N     V +SP  K ++ A+ D  ++L+D    +
Sbjct: 162 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD--YSK 219
Query: 349 GAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           G  +K T++ HK  ++     +S    +  VS S DN V +W+L+
Sbjct: 220 GKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 263

>pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL 326
            TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S  
Sbjct: 13  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 72
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
           S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV+
Sbjct: 73  SNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 128
Query: 387 LWDLR 391
           +WD++
Sbjct: 129 IWDVK 133

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 115 HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   VS++ F  + +W+ +   D  + IW    G+ +  I GH   +  VAW        
Sbjct: 21  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSN 77
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
             +S S D+T  IW+     +S +C+   +GH   +     +       +G +D  ++IW
Sbjct: 78  LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 133
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II 290
                K                              L TL  H + +SAV +      I+
Sbjct: 134 DVKTGK-----------------------------CLKTLPAHSDPVSAVHFNRDGSLIV 164
Query: 291 TSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +SS+D   +IWD   G     ++   N     V +SP  K ++ A+ D  ++L+D    +
Sbjct: 165 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD--YSK 222
Query: 349 GAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           G  +K T++ HK  ++     +S    +  VS S DN V +W+L+
Sbjct: 223 GKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 266

>pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL 326
            TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S  
Sbjct: 16  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 75
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
           S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV+
Sbjct: 76  SNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 131
Query: 387 LWDLR 391
           +WD++
Sbjct: 132 IWDVK 136

>pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 27  QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 86
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW  +       +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 87  GHKLGISDVAWSSDSN---LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 139
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 140 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 170
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 171 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 230
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 231 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 287
Query: 388 WDLR 391
           W+L+
Sbjct: 288 WNLQ 291

>pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 125/305 (40%), Gaps = 53/305 (17%)
Query: 101 LESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNI 151
            +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I
Sbjct: 8   FQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI 67
Query: 152 PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVT 211
            GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +    
Sbjct: 68  SGHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCN 120
Query: 212 VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271
            +       +G +D  ++IW     K                              L TL
Sbjct: 121 FNPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTL 151
Query: 272 KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSK 328
             H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K
Sbjct: 152 PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 211
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVK 386
            ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V 
Sbjct: 212 YILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVY 268
Query: 387 LWDLR 391
           +W+L+
Sbjct: 269 IWNLQ 273

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 47/285 (16%)
Query: 115 HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   VS++ F  + +W+ +   D  + IW    G+ +  I GH   +  VAW        
Sbjct: 25  HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSN 81
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
             +S S D+T  IW+     +S +C+   +GH   +     +       +G +D  ++IW
Sbjct: 82  LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II 290
                K                              L TL  H + +SAV +      I+
Sbjct: 138 DVKTGK-----------------------------CLKTLPAHSDPVSAVHFNRDGSLIV 168
Query: 291 TSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +SS+D   +IWD   G     ++   N     V +SP  K ++ A+ D  ++L+D    +
Sbjct: 169 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD--YSK 226
Query: 349 GAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           G  +K T++ HK  ++     +S    +  VS S DN V +W+L+
Sbjct: 227 GKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 270

>pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL 326
            TL GH +A+S+V+++   E + +SS D  +KIW A  G  +  I G+K    DV +S  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 79
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
           S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV+
Sbjct: 80  SNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 135
Query: 387 LWDLR 391
           +WD++
Sbjct: 136 IWDVK 140

>pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 25  QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 84
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW  +       +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 85  GHKLGISDVAWSSDSN---LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 137
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 168
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 169 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 228
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 229 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 285
Query: 388 WDLR 391
           W+L+
Sbjct: 286 WNLQ 289

>pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 9   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 68
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 69  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 121
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 122 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 152
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 153 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 212
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 213 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 269
Query: 388 WDLR 391
           W+L+
Sbjct: 270 WNLQ 273

>pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 9   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 68
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 69  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 121
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 122 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 152
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 153 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 212
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 213 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 269
Query: 388 WDLR 391
           W+L+
Sbjct: 270 WNLQ 273

>pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 3   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 62
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 63  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 115
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 116 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 146
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 206
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 207 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 263
Query: 388 WDLR 391
           W+L+
Sbjct: 264 WNLQ 267

>pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 3   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 62
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 63  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 115
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 116 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 146
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 206
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 207 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 263
Query: 388 WDLR 391
           W+L+
Sbjct: 264 WNLQ 267

>pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 4   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 63
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW          +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 64  GHKLGISDVAW---SSDSNLLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 116
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 117 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 147
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 148 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 207
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 208 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 264
Query: 388 WDLR 391
           W+L+
Sbjct: 265 WNLQ 268

>pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 53/304 (17%)
Query: 102 ESTPTPSPLDCIL------HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIP 152
           +S PTP   +  L      H   VS++ F  + +W+ +   D  + IW    G+ +  I 
Sbjct: 8   QSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 67
Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           GH   +  VAW  +       +S S D+T  IW+     +S +C+   +GH   +     
Sbjct: 68  GHKLGISDVAWSSDSN---LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNF 120
Query: 213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK 272
           +       +G +D  ++IW     K                              L TL 
Sbjct: 121 NPQSNLIVSGSFDESVRIWDVKTGK-----------------------------CLKTLP 151
Query: 273 GHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKL 329
            H + +SAV +      I++SS+D   +IWD   G     ++   N     V +SP  K 
Sbjct: 152 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 211
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKL 387
           ++ A+ D  ++L+D    +G  +K T++ HK  ++     +S    +  VS S DN V +
Sbjct: 212 ILAATLDNTLKLWD--YSKGKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 268
Query: 388 WDLR 391
           W+L+
Sbjct: 269 WNLQ 272

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/285 (23%), Positives = 117/285 (41%), Gaps = 47/285 (16%)
Query: 115 HDDWVSAIDF--HNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   VS++ F  + +W+     D  + IW    G+ +  I GH   +  VAW        
Sbjct: 25  HTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSN 81
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
             +S S D+T  IW+     +S +C+   +GH   +     +       +G +D  ++IW
Sbjct: 82  LLVSASDDKTLKIWD----VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIW 137
Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II 290
                K                              L TL  H + +SAV +      I+
Sbjct: 138 DVKTGK-----------------------------CLKTLPAHSDPVSAVHFNRDGSLIV 168
Query: 291 TSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +SS+D   +IWD   G     ++   N     V +SP  K ++ A+ D  ++L+D    +
Sbjct: 169 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD--YSK 226
Query: 349 GAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           G  +K T++ HK  ++     +S    +  VS S DN V +W+L+
Sbjct: 227 GKCLK-TYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 270

>pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 269 ITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL 326
            TL GH +A+S+V+++   E +  SS D  +KIW A  G  +  I G+K    DV +S  
Sbjct: 20  FTLAGHTKAVSSVKFSPNGEWLAASSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD 79
Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
           S L+++AS DK ++++D  V  G  +K T   H  +V    ++P    L VS SFD SV+
Sbjct: 80  SNLLVSASDDKTLKIWD--VSSGKCLK-TLKGHSNYVFCCNFNP-QSNLIVSGSFDESVR 135
Query: 387 LWDLR 391
           +WD++
Sbjct: 136 IWDVK 140

>pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 117/275 (42%), Gaps = 25/275 (9%)
Query: 119 VSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS 177
           ++ + F +++++TG  D  + ++ +   +  L + GH G V    W          +S S
Sbjct: 125 ITCLQFEDNYVITGADDKXIRVYDSINKKFLLQLSGHDGGV----WALKYAHGGILVSGS 180
Query: 178 TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR--QQFATGGWDCLLKIWSADI 235
           TD+T  +W+ K       C HV  GH   +  + + E +  +   TG  D  L +W   +
Sbjct: 181 TDRTVRVWDIKKGC----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK--L 234
Query: 236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD 295
            KE   P    D G         ++   +   +  L+GH  ++  V     + +++ S+D
Sbjct: 235 PKESSVP----DHGEEHDYPLVFHTPEENPYFVGVLRGHXASVRTVSGHG-NIVVSGSYD 289
Query: 296 HTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS 354
           +TL +WD         + G+    +   Y    K  I+AS D  IR++D    E   +  
Sbjct: 290 NTLIVWDVAQXKCLYILSGHTDRIYSTIYDHERKRCISASXDTTIRIWDL---ENGELXY 346
Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
           T   H   V  +R S    +  VSA+ D S++ WD
Sbjct: 347 TLQGHTALVGLLRLS---DKFLVSAAADGSIRGWD 378

>pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 118/275 (42%), Gaps = 25/275 (9%)
Query: 119 VSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS 177
           ++ + F +++++TG  D  + ++ +   +  L + GH G V    W          +S S
Sbjct: 125 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGV----WALKYAHGGILVSGS 180
Query: 178 TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR--QQFATGGWDCLLKIWSADI 235
           TD+T  +W+ K       C HV  GH   +  + + E +  +   TG  D  L +W   +
Sbjct: 181 TDRTVRVWDIKKGC----CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK--L 234
Query: 236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD 295
            KE   P    D G         ++   +   +  L+GH  ++  V     + +++ S+D
Sbjct: 235 PKESSVP----DHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG-NIVVSGSYD 289
Query: 296 HTLKIWD-AELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS 354
           +TL +WD A++  +          +   Y    K  I+AS D  IR++D    E   +  
Sbjct: 290 NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL---ENGELMY 346
Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
           T   H   V  +R S    +  VSA+ D S++ WD
Sbjct: 347 TLQGHTALVGLLRLS---DKFLVSAAADGSIRGWD 378

>pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGN 315
           +  S  S   P   L+GH   +S V  +      +++SWDH+L++W+ + G  + + +G+
Sbjct: 49  RHSSECSYGLPDRRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGH 108
Query: 316 -KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP-IDP 373
            K    V +SP ++ +++   D  +R+++  VK   +   +  +H +WV  VR+SP +D 
Sbjct: 109 TKDVLSVAFSPDNRQIVSGGRDNALRVWN--VKGECMHTLSRGAHTDWVSCVRFSPSLDA 166
Query: 374 QLFVSASFDNSVKLWDL 390
            + VS  +DN VK+WDL
Sbjct: 167 PVIVSGGWDNLVKVWDL 183

>pdb|2XZM|R Chain R, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit In Complex With Initiation Factor 1. This File Contains The 40s Subunit And Initiation Factor For Molecule 1 Length = 343

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 12/134 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P   L GH   +S +  +  +   I+SSWD TL++WD   G      VG++S  + V +S
Sbjct: 68  PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFS 127
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ---------L 375
           P ++ +++A A+++I+L++  + E     +   +H +WV  VR+SPI             
Sbjct: 128 PDNRQILSAGAEREIKLWNI-LGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPY 186
Query: 376 FVSASFDNSVKLWD 389
           F S  +D  +K+W+
Sbjct: 187 FASVGWDGRLKVWN 200

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 61/315 (19%), Positives = 133/315 (42%), Gaps = 49/315 (15%)
Query: 115 HDDWVSAIDFHNDW--ILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
           H   V+ + FH  +  +++   D ++ +W    G+ +  + GH   V+ +++   D    
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF---DHSGK 163
Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
              S S D T  +W+++      ECI    GH+  + +V++  +     +   D  +K+W
Sbjct: 164 LLASCSADMTIKLWDFQ----GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 219
Query: 232 SADISK------------ERGDPSENGDE-GTTSKKRKKEYSSASSRTPLITLKGHKEAI 278
                                 P+++G    + S  +       +++     L+ H+  +
Sbjct: 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVV 279
Query: 279 SAVQW------TAVDE---------------IITSSWDHTLKIWDAELGGMKSEIVGNKS 317
             + W      +++ E               +++ S D T+K+WD   G     +VG+ +
Sbjct: 280 ECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339
Query: 318 FF-DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF 376
           +   V +    K +++ + DK +R++D K K       T ++H+ +V S+ +    P + 
Sbjct: 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---CMKTLNAHEHFVTSLDFHKTAPYV- 395
Query: 377 VSASFDNSVKLWDLR 391
           V+ S D +VK+W+ R
Sbjct: 396 VTGSVDQTVKVWECR 410

>pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 271 LKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSK 328
           L GH+  ++ V +  V  ++ S S D T+K+WD E G  +  + G+  S  D+ +    K
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 163
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
           L+ + SAD  I+L+D    +G     T   H   V SV   P    + VSAS D ++K+W
Sbjct: 164 LLASCSADMTIKLWDF---QGFECIRTMHGHDHNVSSVSIMPNGDHI-VSASRDKTIKMW 219
Query: 389 DLR 391
           +++
Sbjct: 220 EVQ 222

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 45/297 (15%)
Query: 119 VSAIDFHNDWILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS 177
           V  + + +  I++G  D+++ IW +   E K  + GH G V  + +      +   I+ S
Sbjct: 136 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGS 190
Query: 178 TDQTAMIWEWKVESNSIECIHVCRG--HERGLETVTVSESRQQFATGGWDCLLKIWSADI 235
           +D T  +W+          IH C    H R    + V+ S+ + +   WD        DI
Sbjct: 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDR-SIAVWD---MASPTDI 246
Query: 236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI----------TLKGHKEAISAVQWTA 285
           +  R                K   S++  RT  +          TL GHK  I+ +Q+  
Sbjct: 247 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR- 305
Query: 286 VDEIITS-SWDHTLKIWDAELGGMKSEIVGNKSF-----FDVHYSPLSKLVITASADKQI 339
            D ++ S S D+T+++WD E G     + G++       FD      +K +++ + D +I
Sbjct: 306 -DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD------NKRIVSGAYDGKI 358
Query: 340 RLY------DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           +++      DP+   G +   T   H   V  +++   D    VS+S D+++ +WD 
Sbjct: 359 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDF 412

>pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 40/205 (19%)
Query: 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG 246
           W+   +S++ IH      +G+  +   +  Q+  +G  D  +KIW               
Sbjct: 116 WRCGRHSLQRIHCRSETSKGVYCLQYDD--QKIVSGLRDNTIKIW--------------- 158
Query: 247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAE 304
           D+ T   KR               L GH  ++  +Q+   DE  IIT S D T+++WD  
Sbjct: 159 DKNTLECKR--------------ILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVN 201
Query: 305 LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ 364
            G M + ++ +     +H    + +++T S D+ I ++D        ++     H+  V 
Sbjct: 202 TGEMLNTLIHHCEAV-LHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 260
Query: 365 SVRWSPIDPQLFVSASFDNSVKLWD 389
            V     D +  VSAS D ++K+W+
Sbjct: 261 VV---DFDDKYIVSASGDRTIKVWN 282

>pdb|3FM0|A Chain A, Crystal Structure Of Wd40 Protein Ciao1 Length = 345

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 69/307 (22%), Positives = 113/307 (36%), Gaps = 52/307 (16%)
Query: 129 ILTGCY-DHSVHIWTRRGE----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM 183
           +L  C  D  + IW   G+      +   GH   V+ VAW           S S D T  
Sbjct: 30  LLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNY---LASASFDATTC 86
Query: 184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERG--- 240
           IW  K   +  EC+    GHE  +++V  + S    AT   D  + +W  D   E     
Sbjct: 87  IW--KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144
Query: 241 --------------DPSENGDEGTTSKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTA 285
                          PS+      +     K Y           TL+GH+  + ++ +  
Sbjct: 145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDP 204
Query: 286 VDEIITS-SWDHTLKIWDAELGGMKSEIVG-----------------NKSFFDVHYSPLS 327
             + + S S D T++IW   L G +  +                   +++ +D+ +  L+
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT 264
Query: 328 KLVITASADKQIRLY------DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF 381
             + TA  D  IR++      DP+    ++      +H + V  V W+P +P L  S S 
Sbjct: 265 GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324
Query: 382 DNSVKLW 388
           D  V  W
Sbjct: 325 DGEVAFW 331

>pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 8/123 (6%)
Query: 274 HKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK--- 328
           H+ ++  VQW   D     +SS+D TLK+WD             ++ +  H SP+S    
Sbjct: 98  HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHC 157
Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
           LV   +   +++L D  +K G+        H++ + +V WSP    +  +AS D+ VKLW
Sbjct: 158 LVAVGTRGPKVQLCD--LKSGS-CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLW 214
Query: 389 DLR 391
           D+R
Sbjct: 215 DVR 217

>pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 138 VHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIEC 196
           + + TRR      + GH   +  + W    G D+   +S S D   +IW+    S +   
Sbjct: 43  IQMRTRR-----TLRGHLAKIYAMHW----GTDSRLLVSASQDGKLIIWD----SYTTNK 89
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
           +H        + T   + S    A GG D +  I++    K R        EG     R+
Sbjct: 90  VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL---KTR--------EGNVRVSRE 138
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK 316
                         L GH   +S  ++   ++I+TSS D T  +WD E G   +   G+ 
Sbjct: 139 --------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 317 S-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
                +  +P ++L ++ + D   +L+D  V+EG + + TF+ H+  + ++ + P +   
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWD--VREG-MCRQTFTGHESDINAICFFP-NGNA 240
Query: 376 FVSASFDNSVKLWDLR 391
           F + S D + +L+DLR
Sbjct: 241 FATGSDDATCRLFDLR 256

>pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 57  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             + ++I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 117 KKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 173 GNDKMVKAWNL 183

>pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 57  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             + ++I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 117 KKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 173 GNDKMVKAWNL 183

>pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 138 VHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIEC 196
           + + TRR      + GH   +  + W    G D+   +S S D   +IW+    S +   
Sbjct: 54  IQMRTRR-----TLRGHLAKIYAMHW----GTDSRLLVSASQDGKLIIWD----SYTTNK 100
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
           +H        + T   + S    A GG D +  I++    K R        EG     R+
Sbjct: 101 VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL---KTR--------EGNVRVSRE 149
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK 316
                         L GH   +S  ++   ++I+TSS D T  +WD E G   +   G+ 
Sbjct: 150 --------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 195
Query: 317 S-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
                +  +P ++L ++ + D   +L+D  V+EG + + TF+ H+  + ++ + P +   
Sbjct: 196 GDVMSLSLAPDTRLFVSGACDASAKLWD--VREG-MCRQTFTGHESDINAICFFP-NGNA 251
Query: 376 FVSASFDNSVKLWDLR 391
           F + S D + +L+DLR
Sbjct: 252 FATGSDDATCRLFDLR 267

>pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 138 VHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIEC 196
           + + TRR      + GH   +  + W    G D+   +S S D   +IW+    S +   
Sbjct: 43  IQMRTRR-----TLRGHLAKIYAMHW----GTDSRLLVSASQDGKLIIWD----SYTTNK 89
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
           +H        + T   + S    A GG D +  I++    K R        EG     R+
Sbjct: 90  VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL---KTR--------EGNVRVSRE 138
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK 316
                         L GH   +S  ++   ++I+TSS D T  +WD E G   +   G+ 
Sbjct: 139 --------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 317 S-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
                +  +P ++L ++ + D   +L+D  V+EG + + TF+ H+  + ++ + P +   
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWD--VREG-MCRQTFTGHESDINAICFFP-NGNA 240
Query: 376 FVSASFDNSVKLWDLR 391
           F + S D + +L+DLR
Sbjct: 241 FATGSDDATCRLFDLR 256

>pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 57  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             + ++I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 117 KKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 173 GNDKMVKAWNL 183

>pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 57  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 116
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             + ++I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 117 KKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 173 GNDKMVKAWNL 183

>pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 51  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDID 110
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             + ++I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 111 KKASMIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 166
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 167 GNDKMVKAWNL 177

>pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 138 VHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTAMIWEWKVESNSIEC 196
           + + TRR      + GH   +  + W    G D+  + S S D   +IW+    S +   
Sbjct: 43  IQMRTRR-----TLRGHLAKIYAMHW----GTDSRLLLSASQDGKLIIWD----SYTTNK 89
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
           +H        + T   + S    A GG D +  I++    K R        EG     R+
Sbjct: 90  VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL---KTR--------EGNVRVSRE 138
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK 316
                         L GH   +S  ++   ++I+TSS D T  +WD E G   +   G+ 
Sbjct: 139 --------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 317 S-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
                +  +P ++L ++ + D   +L+D  V+EG + + TF+ H+  + ++ + P +   
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWD--VREG-MCRQTFTGHESDINAICFFP-NGNA 240
Query: 376 FVSASFDNSVKLWDLR 391
           F + S D + +L+DLR
Sbjct: 241 FATGSDDATCRLFDLR 256

>pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 110/256 (42%), Gaps = 44/256 (17%)
Query: 138 VHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI-SVSTDQTAMIWEWKVESNSIEC 196
           + + TRR      + GH   +  + W    G D+  + S S D   +IW+    S +   
Sbjct: 43  IQMRTRR-----TLRGHLAKIYAMHW----GTDSRLLLSASQDGKLIIWD----SYTTNK 89
Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
           +H        + T   + S    A GG D +  I++    K R        EG     R+
Sbjct: 90  VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL---KTR--------EGNVRVSRE 138
Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK 316
                         L GH   +S  ++   ++I+TSS D T  +WD E G   +   G+ 
Sbjct: 139 --------------LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT 184
Query: 317 S-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
                +  +P ++L ++ + D   +L+D  V+EG + + TF+ H+  + ++ + P +   
Sbjct: 185 GDVMSLSLAPDTRLFVSGACDASAKLWD--VREG-MCRQTFTGHESDINAICFFP-NGNA 240
Query: 376 FVSASFDNSVKLWDLR 391
           F + S D + +L+DLR
Sbjct: 241 FATGSDDATCRLFDLR 256

>pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 267 PLITLKGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYS 324
           P+ + KGH   +     TA     +++SWD TL++WD   G      VG+KS    V   
Sbjct: 57  PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVXSVDID 116
Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSA 379
             +  +I+ S DK I+++  K +      +T   H +WV  VR  P      D    +SA
Sbjct: 117 KKASXIISGSRDKTIKVWTIKGQ----CLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172
Query: 380 SFDNSVKLWDL 390
             D  VK W+L
Sbjct: 173 GNDKXVKAWNL 183

>pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 40/193 (20%)
Query: 207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266
           + +V  S   +  ATG  D L++IW  DI        EN                   R 
Sbjct: 126 IRSVCFSPDGKFLATGAEDRLIRIW--DI--------EN-------------------RK 156
Query: 267 PLITLKGHKEAISAVQW-TAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP 325
            ++ L+GH++ I ++ +  + D++++ S D T++IWD   G     +        V  SP
Sbjct: 157 IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 216
Query: 326 L-SKLVITASADKQIRLYDPKVKEGAIVKS------TFSSHKEWVQSVRWSPIDPQLFVS 378
              K +   S D+ +R++D +   G +V+       + + HK+ V SV ++  D Q  VS
Sbjct: 217 GDGKYIAAGSLDRAVRVWDSET--GFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVS 273
Query: 379 ASFDNSVKLWDLR 391
            S D SVKLW+L+
Sbjct: 274 GSLDRSVKLWNLQ 286

>pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 8/122 (6%)
Query: 274 HKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKS---FFDVHYSPLSKL 329
           H   +SA  +T  D +I+T+S D T  +WD E G +     G+ +     D+  S     
Sbjct: 153 HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212
Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
            ++   DK+  ++D  ++ G  V++ F +H+  V SVR+ P     F S S D + +L+D
Sbjct: 213 FVSGGCDKKAMVWD--MRSGQCVQA-FETHESDVNSVRYYP-SGDAFASGSDDATCRLYD 268
Query: 390 LR 391
           LR
Sbjct: 269 LR 270

>pdb|3IZ6|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s Ribosome Length = 380

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 59/252 (23%), Positives = 101/252 (40%), Gaps = 45/252 (17%)
Query: 151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210
           + GH G V  + W     +    +S S D   ++W       +    H  + H   +   
Sbjct: 62  LQGHSGKVYSLDWTP---EKNWIVSASQDGRLIVWNALTSQKT----HAIKLHCPWVMEC 114
Query: 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270
             + + Q  A GG D    I++     +R        +G     R               
Sbjct: 115 AFAPNGQSVACGGLDSACSIFNLSSQADR--------DGNMPVSR--------------V 152
Query: 271 LKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL-- 326
           L GHK   S+ Q+    E  +IT S D T  +WD    G +  I G++ F   H + +  
Sbjct: 153 LTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT-GQRISIFGSE-FPSGHTADVLS 210
Query: 327 -------SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
                  + + I+ S D  +RL+D ++   A+   T+  H+  + SV++ P D Q F + 
Sbjct: 211 LSINSLNANMFISGSCDTTVRLWDLRITSRAV--RTYHGHEGDINSVKFFP-DGQRFGTG 267
Query: 380 SFDNSVKLWDLR 391
           S D + +L+D+R
Sbjct: 268 SDDGTCRLFDMR 279

>pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 47/202 (23%)
Query: 199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258
           V R H   +     S+  Q+ A+ G D  L+++ A          E G++          
Sbjct: 617 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKA----------ETGEK---------- 656
Query: 259 YSSASSRTPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGM------KSE 311
                    L+ +K H++ +    +++ D  I T S D  +KIWD+  G +       SE
Sbjct: 657 ---------LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE 707
Query: 312 IVGNKSFFDVHYSPLSK--LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
            V        H++  S   L+ T S D  ++L+D   KE    ++T   H   V   R+S
Sbjct: 708 QVNC-----CHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFS 759
Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
           P D +L  S S D +++LWD+R
Sbjct: 760 P-DDELLASCSADGTLRLWDVR 780

>pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 47/202 (23%)
Query: 199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE 258
           V R H   +     S+  Q+ A+ G D  L+++ A          E G++          
Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKA----------ETGEK---------- 649
Query: 259 YSSASSRTPLITLKGHKEAISAVQWTAVDEII-TSSWDHTLKIWDAELGGM------KSE 311
                    L+ +K H++ +    +++ D  I T S D  +KIWD+  G +       SE
Sbjct: 650 ---------LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE 700
Query: 312 IVGNKSFFDVHYSPLSK--LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS 369
            V        H++  S   L+ T S D  ++L+D   KE    ++T   H   V   R+S
Sbjct: 701 QVNC-----CHFTNKSNHLLLATGSNDFFLKLWDLNQKE---CRNTMFGHTNSVNHCRFS 752
Query: 370 PIDPQLFVSASFDNSVKLWDLR 391
           P D +L  S S D +++LWD+R
Sbjct: 753 P-DDELLASCSADGTLRLWDVR 773

>pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 173 FISVSTDQTAMIWEWKVESNSIECIHV-CRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
            +S S D++ ++W+   +  +         GH   +E V +S   Q   +G WD  L++W
Sbjct: 398 IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457
Query: 232 --SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL---------------KGH 274
             +A +S  R       D  + +         ++SR   I L               +GH
Sbjct: 458 DLAAGVSTRRF-VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGH 516
Query: 275 KEAISAVQW---TAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD-VHYSPLSKLV 330
           ++ +S V++   T    I+++SWD T+K+W+     ++S + G+  +   V  SP   L 
Sbjct: 517 RDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLC 576
Query: 331 ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
            +   D  + L+D  + EG  + S  ++    + ++ +SP   + ++ A+ ++ +K+WDL
Sbjct: 577 ASGGKDGVVLLWD--LAEGKKLYSLEANSV--IHALCFSP--NRYWLCAATEHGIKIWDL 630

>pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 266 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF---- 319
            P + L+GH++    + W +     ++++S DHT+ +WD   G  + +IV  K+ F    
Sbjct: 170 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 229
Query: 320 ----DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
               DV +  L + +  + AD Q + ++D +    +       +H   V  + ++P    
Sbjct: 230 AVVEDVAWHLLHESLFGSVADDQKLXIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 289
Query: 375 LFVSASFDNSVKLWDLR 391
           +  + S D +V LWDLR
Sbjct: 290 ILATGSADKTVALWDLR 306

>pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 11/137 (8%)
Query: 266 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF---- 319
            P + L+GH++    + W +     ++++S DHT+ +WD   G  + +IV  K+ F    
Sbjct: 170 NPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHS 229
Query: 320 ----DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
               DV +  L + +  + AD Q + ++D +    +       +H   V  + ++P    
Sbjct: 230 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEF 289
Query: 375 LFVSASFDNSVKLWDLR 391
           +  + S D +V LWDLR
Sbjct: 290 ILATGSADKTVALWDLR 306

>pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 52/238 (21%), Positives = 105/238 (44%), Gaps = 21/238 (8%)
Query: 154 HGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV 212
           H   +  VAW  N  +++   ++ S D    +W+W+ E   ++      GH+ G+ +V +
Sbjct: 31  HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW--SLEGHQLGVVSVDI 88
Query: 213 SESRQQFATGGWDCLLKIWSADISKE-RGDPSENGDEGTTSKKRKKEYSSASSRTPLITL 271
           S +    A+   D  +++W  +  K+ +   +   D  T +     +Y +  +    + +
Sbjct: 89  SHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNI 148
Query: 272 ----KGHKEA--------ISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGNK-S 317
                G KE         I ++ ++   + + S + D  + I+D   G +   + G+   
Sbjct: 149 FGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP 208
Query: 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
              + +SP S+L++TAS D  I++YD    + A +  T S H  WV +V + P D   
Sbjct: 209 IRSLTFSPDSQLLVTASDDGYIKIYDV---QHANLAGTLSGHASWVLNVAFCPDDTHF 263

>pdb|2HES|X Chain X, Cytosolic Iron-sulphur Assembly Protein- 1 Length = 330

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 125 HNDWILTGCYDHSVHIWT------RRGEHKLN--IPGHGGPVKGVAWLYNDGKDAAFISV 176
           H   +  G +D +V IW       R  E  L   I GH   VKGVAW  NDG   A  + 
Sbjct: 69  HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW-SNDGYYLA--TC 125
Query: 177 STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS 236
           S D++  IWE        ECI V + H + ++ V    S    A+  +D  ++IW     
Sbjct: 126 SRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW----- 180
Query: 237 KERGDPSE-----NGDEGTT 251
           K+  D  E     NG EGT 
Sbjct: 181 KDYDDDWECVAVLNGHEGTV 200

>pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 25/237 (10%)
Query: 173 FISVSTDQTAMIWEW-KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
            +S S D+T ++W+  + E+N        RGH   +  V +S   Q   +G WD  L++W
Sbjct: 54  ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113
Query: 232 SADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-------------KGHKEA 277
                +  R       D  + +         + SR   I L             + H E 
Sbjct: 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 173
Query: 278 ISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVGNKSFFD-VHYSPLSKLVITA 333
           +S V+++       I++  WD  +K+W+     +K+  +G+  + + V  SP   L  + 
Sbjct: 174 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 233
Query: 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
             D Q  L+D  + EG  + +      + + ++ +SP   + ++ A+   S+K+WDL
Sbjct: 234 GKDGQAMLWD--LNEGKHLYTL--DGGDIINALCFSP--NRYWLCAATGPSIKIWDL 284

>pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/237 (22%), Positives = 101/237 (42%), Gaps = 25/237 (10%)
Query: 173 FISVSTDQTAMIWEW-KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
            +S S D+T ++W+  + E+N        RGH   +  V +S   Q   +G WD  L++W
Sbjct: 31  ILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 90
Query: 232 SADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-------------KGHKEA 277
                +  R       D  + +         + SR   I L             + H E 
Sbjct: 91  DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW 150
Query: 278 ISAVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVGNKSFFD-VHYSPLSKLVITA 333
           +S V+++       I++  WD  +K+W+     +K+  +G+  + + V  SP   L  + 
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASG 210
Query: 334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
             D Q  L+D  + EG  + +      + + ++ +SP   + ++ A+   S+K+WDL
Sbjct: 211 GKDGQAMLWD--LNEGKHLYTL--DGGDIINALCFSP--NRYWLCAATGPSIKIWDL 261

>pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 64/137 (46%), Gaps = 11/137 (8%)
Query: 266 TPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF---- 319
            P + L+GH++    + W       ++++S DHT+ +WD      + ++V  K+ F    
Sbjct: 168 NPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHT 227
Query: 320 ----DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
               DV +  L + +  + AD Q + ++D +    +    +  +H   V  + ++P    
Sbjct: 228 AVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEF 287
Query: 375 LFVSASFDNSVKLWDLR 391
           +  + S D +V LWDLR
Sbjct: 288 ILATGSADKTVALWDLR 304

>pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 267 PLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF----- 319
           P + L+GH++    + W       ++++S DHT+ +WD      +  ++  K+ F     
Sbjct: 177 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA 236
Query: 320 ---DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
              DV +  L + +  + AD Q + ++D +    +    T  +H   V  + ++P    +
Sbjct: 237 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 296
Query: 376 FVSASFDNSVKLWDLR 391
             + S D +V LWDLR
Sbjct: 297 LATGSADKTVALWDLR 312

>pdb|2B4E|A Chain A, Crystal Structure Of Murine Coronin-1: Monoclinic Form Length = 402

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 265 RTPLITLKGHKEAISAVQW--TAVDEIITSSWDHTLKIWDAELGGMKSEI---VGNKSFF 319
           R P+ITL+GH + +  V W  TA + ++++  D+ + +WD   G     +   V   + +
Sbjct: 121 REPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY 180
Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
            V +S    L+ T+  DK++R+ +P  ++G +V      H E  + V    +     ++ 
Sbjct: 181 SVDWSRDGALICTSCRDKRVRVIEP--RKGTVVAEKDRPH-EGTRPVHAVFVSEGKILTT 237
Query: 380 SF----DNSVKLWDLR 391
            F    +  V LWD +
Sbjct: 238 GFSRMSERQVALWDTK 253

>pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 267 PLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF----- 319
           P + L+GH++    + W       ++++S DHT+ +WD      +  ++  K+ F     
Sbjct: 175 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA 234
Query: 320 ---DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
              DV +  L + +  + AD Q + ++D +    +    T  +H   V  + ++P    +
Sbjct: 235 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 294
Query: 376 FVSASFDNSVKLWDLR 391
             + S D +V LWDLR
Sbjct: 295 LATGSADKTVALWDLR 310

>pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 267 PLITLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF----- 319
           P + L+GH++    + W       ++++S DHT+ +WD      +  ++  K+ F     
Sbjct: 173 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA 232
Query: 320 ---DVHYSPLSKLVITASADKQ-IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
              DV +  L + +  + AD Q + ++D +    +    T  +H   V  + ++P    +
Sbjct: 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFI 292
Query: 376 FVSASFDNSVKLWDLR 391
             + S D +V LWDLR
Sbjct: 293 LATGSADKTVALWDLR 308

>pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 49/273 (17%)
Query: 127 DWILTGCYDHSVHIWT-RRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185
           +WI+ G  D  + ++    GE  ++   H   ++ +A           +S S D T  +W
Sbjct: 68  NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLW 124
Query: 186 EWKVESNSIECIHVCRGHERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSE 244
            W+   N+        GHE  +  V  + +    FA+G  D  +K+WS   S        
Sbjct: 125 NWE---NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-------- 173
Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE---IITSSWDHTLKI 300
                                TP  TL  G +  ++ V +  + +   +IT+S D T+KI
Sbjct: 174 ---------------------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 301 WDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
           WD +     + + G   N SF   H  P   ++I+ S D  +++++    +   V+ T +
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFH--PTLPIIISGSEDGTLKIWNSSTYK---VEKTLN 267
Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
              E    +   P   + ++++ FDN   +  L
Sbjct: 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300

>pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 49/273 (17%)
Query: 127 DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185
           +WI+ G  D  + ++    GE  ++   H   ++ +A           +S S D T  +W
Sbjct: 68  NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA---VHPTKPYVLSGSDDLTVKLW 124
Query: 186 EWKVESNSIECIHVCRGHERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSE 244
            W+   N+        GHE  +  V  + +    FA+G  D  +K+WS   S        
Sbjct: 125 NWE---NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-------- 173
Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE---IITSSWDHTLKI 300
                                TP  TL  G +  ++ V +  + +   +IT+S D T+KI
Sbjct: 174 ---------------------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 301 WDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
           WD +     + + G   N SF   H  P   ++I+ S D  +++++    +   V+ T +
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFH--PTLPIIISGSEDGTLKIWNSSTYK---VEKTLN 267
Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
              E    +   P   + ++++ FDN   +  L
Sbjct: 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300

>pdb|2AQ5|A Chain A, Crystal Structure Of Murine Coronin-1 Length = 402

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 12/136 (8%)
Query: 265 RTPLITLKGHKEAISAVQW--TAVDEIITSSWDHTLKIWDAELGGMKSEI---VGNKSFF 319
           R P+ITL+GH + +  V W  TA + ++++  D+ + +WD   G     +   V   + +
Sbjct: 121 REPVITLEGHTKRVGIVAWHPTAQNVLLSAGXDNVILVWDVGTGAAVLTLGPDVHPDTIY 180
Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
            V +S    L+ T+  DK++R+ +P  ++G +V      H E  + V    +     ++ 
Sbjct: 181 SVDWSRDGALICTSCRDKRVRVIEP--RKGTVVAEKDRPH-EGTRPVHAVFVSEGKILTT 237
Query: 380 SF----DNSVKLWDLR 391
            F    +  V LWD +
Sbjct: 238 GFSRMSERQVALWDTK 253

>pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 49/273 (17%)
Query: 127 DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185
           +WI+ G  D  + ++    GE  ++   H   ++ +A           +S S D T  +W
Sbjct: 68  NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA---VHPTKPYVLSGSDDLTVKLW 124
Query: 186 EWKVESNSIECIHVCRGHERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSE 244
            W+   N+        GHE  +  V  + +    FA+G  D  +K+WS   S        
Sbjct: 125 NWE---NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-------- 173
Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE---IITSSWDHTLKI 300
                                TP  TL  G +  ++ V +  + +   +IT+S D T+KI
Sbjct: 174 ---------------------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 301 WDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
           WD +     + + G   N SF   H  P   ++I+ S D  +++++    +   V+ T +
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFH--PTLPIIISGSEDGTLKIWNSSTYK---VEKTLN 267
Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
              E    +   P   + ++++ FDN   +  L
Sbjct: 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300

>pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 109/273 (39%), Gaps = 49/273 (17%)
Query: 127 DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW 185
           +WI+ G  D  + ++    GE  ++   H   ++ +A           +S S D T  +W
Sbjct: 68  NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIA---VHPTKPYVLSGSDDLTVKLW 124
Query: 186 EWKVESNSIECIHVCRGHERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSE 244
            W+   N+        GHE  +  V  + +    FA+G  D  +K+WS   S        
Sbjct: 125 NWE---NNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-------- 173
Query: 245 NGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE---IITSSWDHTLKI 300
                                TP  TL  G +  ++ V +  + +   +IT+S D T+KI
Sbjct: 174 ---------------------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212
Query: 301 WDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
           WD +     + + G   N SF   H  P   ++I+ S D  +++++    +   V+ T +
Sbjct: 213 WDYQTKSCVATLEGHMSNVSFAVFH--PTLPIIISGSEDGTLKIWNSSTYK---VEKTLN 267
Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
              E    +   P   + ++++ FDN   +  L
Sbjct: 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300

>pdb|3ODT|A Chain A, Crystal Structure Of Wd40 Beta Propeller Domain Of Doa1 Length = 313

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 261 SASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD 320
           + S   PL TL GH+  + ++ +     +I+ SWD T K+W  E   + +    N S +D
Sbjct: 90  ATSGEDPLYTLIGHQGNVCSLSFQD-GVVISGSWDKTAKVW-KEGSLVYNLQAHNASVWD 147
Query: 321 VHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
                 S+   +TASADK I+L+    +   ++K+    H + V+ +  + +D   F+S 
Sbjct: 148 AKVVSFSENKFLTASADKTIKLW----QNDKVIKTFSGIHNDVVRHL--AVVDDGHFISC 201
Query: 380 SFDNSVKLWD 389
           S D  +KL D
Sbjct: 202 SNDGLIKLVD 211

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	391
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
1vyh_C	410	Platelet-activating factor acetylhydrolase IB alph	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
3ow8_A	321	WD repeat-containing protein 61; structural genomi	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
2ynn_A	304	Coatomer subunit beta'; protein transport, peptide	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
1got_B	340	GT-beta; complex (GTP-binding/transducer), G prote	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
4gqb_B	344	Methylosome protein 50; TIM barrel, beta-propeller	100.0
2hes_X	330	YDR267CP; beta-propeller, WD40 repeat, biosyntheti	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3fm0_A	345	Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r	100.0
2pbi_B	354	Guanine nucleotide-binding protein subunit beta 5;	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
3frx_A	319	Guanine nucleotide-binding protein subunit beta- l	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4ery_A	312	WD repeat-containing protein 5; WD40, WIN motif, b	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
4g56_B	357	MGC81050 protein; protein arginine methyltransfera	100.0
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	100.0
2xzm_R	343	RACK1; ribosome, translation; 3.93A {Tetrahymena t	100.0
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	100.0
1nr0_A	611	Actin interacting protein 1; beta propeller, WD40	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
2ymu_A	577	WD-40 repeat protein; unknown function, two domain	100.0
1erj_A	393	Transcriptional repressor TUP1; beta-propeller, tr	100.0
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	100.0
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
1gxr_A	337	ESG1, transducin-like enhancer protein 1; transcri	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
3dm0_A	694	Maltose-binding periplasmic protein fused with RAC	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
2j04_B	524	YDR362CP, TAU91; beta propeller, type 2 promoters,	100.0
1sq9_A	397	Antiviral protein SKI8; WD repeat, beta-transducin	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	100.0
1k8k_C	372	P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-	100.0
3ei3_B	383	DNA damage-binding protein 2; UV-damage, DDB, nucl	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
1r5m_A	425	SIR4-interacting protein SIF2; transcription corep	100.0
3jro_A	753	Fusion protein of protein transport protein SEC13	100.0
2pm9_A	416	Protein WEB1, protein transport protein SEC31; bet	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3dwl_C	377	Actin-related protein 2/3 complex subunit 1; prope	100.0
1p22_A	435	F-BOX/WD-repeat protein 1A; ubiquitination, degrad	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3v7d_B	464	Cell division control protein 4; WD 40 domain, pho	100.0
3vl1_A	420	26S proteasome regulatory subunit RPN14; beta-prop	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2pm7_B	297	Protein transport protein SEC13, protein transport	100.0
3i2n_A	357	WD repeat-containing protein 92; WD40 repeats, str	100.0
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	100.0
3odt_A	313	Protein DOA1; ubiquitin, nuclear protein; HET: MSE	100.0
3bg1_A	316	Protein SEC13 homolog; NPC, transport, WD repeat,	100.0
2ovr_B	445	FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40	100.0
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	100.0
3k26_A	366	Polycomb protein EED; WD40, structural genomics, N	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
3dw8_B	447	Serine/threonine-protein phosphatase 2A 55 kDa RE	100.0
3iz6_a	380	40S ribosomal protein RACK1 (RACK1); eukaryotic ri	100.0
3gre_A	437	Serine/threonine-protein kinase VPS15; seven-blade	100.0
3mkq_A	814	Coatomer beta'-subunit; beta-propeller, alpha-sole	100.0
3sfz_A	1249	APAF-1, apoptotic peptidase activating factor 1; a	100.0
1yfq_A	342	Cell cycle arrest protein BUB3; WD repeat WD40 rep	100.0
2aq5_A	402	Coronin-1A; WD40 repeat, 7-bladed beta-propeller,	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
2oaj_A	902	Protein SNI1; WD40 repeat, beta propeller, endocyt	100.0
1pgu_A	615	Actin interacting protein 1; WD repeat, seven-blad	100.0
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	100.0
4aez_A	401	CDC20, WD repeat-containing protein SLP1; cell cyc	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	100.0
2vdu_B	450	TRNA (guanine-N(7)-)-methyltransferase- associated	100.0
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	100.0
4e54_B	435	DNA damage-binding protein 2; beta barrel, double	100.0
3jrp_A	379	Fusion protein of protein transport protein SEC13	100.0
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.98
4aow_A	340	Guanine nucleotide-binding protein subunit beta-2;	99.98
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.98
3f3f_A	351	Nucleoporin SEH1; structural protein, protein comp	99.97
4h5i_A	365	Guanine nucleotide-exchange factor SEC12; copii ve	99.97
2xyi_A	430	Probable histone-binding protein CAF1; transcripti	99.97
3lrv_A	343	PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu	99.97
3zwl_B	369	Eukaryotic translation initiation factor 3 subuni;	99.97
4a11_B	408	DNA excision repair protein ERCC-8; DNA binding pr	99.97
4gga_A	420	P55CDC, cell division cycle protein 20 homolog; ce	99.97
3mmy_A	368	MRNA export factor; mRNA export, nuclear protein;	99.97
2j04_A	588	TAU60, YPL007P, hypothetical protein YPL007C; beta	99.97
3jro_A	753	Fusion protein of protein transport protein SEC13	99.97
3vu4_A	355	KMHSV2; beta-propeller fold, protein transport; 2.	99.97
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.97
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.97
4ggc_A	318	P55CDC, cell division cycle protein 20 homolog; ce	99.96
2w18_A	356	PALB2, fancn, partner and localizer of BRCA2; fanc	99.96
4gq1_A	393	NUP37; propeller, transport protein; 2.40A {Schizo	99.96
3bws_A	433	Protein LP49; two-domain, immunoglobulin-like, 7-b	99.95
1l0q_A	391	Surface layer protein; SLP, S-layer, 7-bladed beta	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.95
2hqs_A	415	Protein TOLB; TOLB, PAL, TOL, transport protein-li	99.92
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.91
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.9
1ri6_A	343	Putative isomerase YBHE; 7-bladed propeller, enzym	99.9
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.89
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.89
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.89
2ojh_A	297	Uncharacterized protein ATU1656/AGR_C_3050; TOLB,	99.89
2oit_A	434	Nucleoporin 214KDA; NH2 terminal domain of NUP214/	99.89
1nir_A	543	Nitrite reductase; hemoprotein, denitrification, d	99.89
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.88
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.88
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.88
2ecf_A	741	Dipeptidyl peptidase IV; prolyl oligopeptidase fam	99.87
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.87
3u4y_A	331	Uncharacterized protein; structural genomics, PSI-	99.86
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.86
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.86
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.85
2z3z_A	706	Dipeptidyl aminopeptidase IV; peptidase family S9,	99.85
1xfd_A	723	DIP, dipeptidyl aminopeptidase-like protein 6, dip	99.84
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.84
3vgz_A	353	Uncharacterized protein YNCE; beta-propeller, prot	99.83
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.83
1k32_A	1045	Tricorn protease; protein degradation, substrate g	99.82
3hfq_A	347	Uncharacterized protein LP_2219; Q88V64_lacpl, NES	99.81
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.81
3o4h_A	582	Acylamino-acid-releasing enzyme; alpha/beta hydrol	99.81
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.8
3scy_A	361	Hypothetical bacterial 6-phosphogluconolactonase;	99.79
1pby_B	337	Quinohemoprotein amine dehydrogenase 40 kDa subuni	99.77
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.77
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.74
1z68_A	719	Fibroblast activation protein, alpha subunit; sepr	99.74
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.72
1jof_A	365	Carboxy-CIS,CIS-muconate cyclase; beta-propeller,	99.7
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.69
1jmx_B	349	Amine dehydrogenase; oxidoreductase; HET: TRQ HEC;	99.69
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.69
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.68
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.68
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.68
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.67
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.67
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.67
2dg1_A	333	DRP35, lactonase; beta propeller, hydrolase; 1.72A	99.66
3azo_A	662	Aminopeptidase; POP family, hydrolase; 2.00A {Stre	99.65
3pe7_A	388	Oligogalacturonate lyase; seven-bladed beta-propel	99.64
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.62
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.62
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.61
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.59
4a5s_A	740	Dipeptidyl peptidase 4 soluble form; hydrolase, ty	99.59
1q7f_A	286	NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL	99.58
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.58
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.57
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.57
3c5m_A	396	Oligogalacturonate lyase; blade-shaped beta-propel	99.57
2oiz_A	361	Aromatic amine dehydrogenase, large subunit; oxido	99.55
3fvz_A	329	Peptidyl-glycine alpha-amidating monooxygenase; be	99.54
3dsm_A	328	Uncharacterized protein bacuni_02894; seven_blated	99.53
2gop_A	347	Trilobed protease; beta propeller, open velcro, hy	99.53
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.52
3e5z_A	296	Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco	99.51
2z2n_A	299	Virginiamycin B lyase; seven-bladed beta-propeller	99.5
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.5
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.47
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.46
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.45
3no2_A	276	Uncharacterized protein; six-bladed beta-propeller	99.43
2xdw_A	710	Prolyl endopeptidase; alpha/beta-hydrolase, amnesi	99.42
2bkl_A	695	Prolyl endopeptidase; mechanistic study, celiac sp	99.41
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	99.4
1rwi_B	270	Serine/threonine-protein kinase PKND; beta propell	99.4
1xip_A	388	Nucleoporin NUP159; beta-propeller, transport prot	99.39
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	99.37
2qc5_A	300	Streptogramin B lactonase; beta propeller, lyase;	99.37
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.34
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.28
1qks_A	567	Cytochrome CD1 nitrite reductase; enzyme, oxidored	99.27
3hrp_A	409	Uncharacterized protein; NP_812590.1, structural g	99.26
1yr2_A	741	Prolyl oligopeptidase; prolyl endopeptidase, mecha	99.25
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	99.25
1pjx_A	314	Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries	99.19
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.17
2hz6_A	369	Endoplasmic reticulum to nucleus signalling 1 isof	99.12
3g4e_A	297	Regucalcin; six bladed beta-propeller, gluconolcat	99.11
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	99.1
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	99.09
3dr2_A	305	Exported gluconolactonase; gluconolactonase SMP-30	99.08
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	99.06
2ghs_A	326	AGR_C_1268P; regucalcin, structural genomics, join	99.04
2qe8_A	343	Uncharacterized protein; structural genomics, join	99.03
3sjl_D	386	Methylamine dehydrogenase heavy chain; MAUG, C-hem	98.96
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.96
2mad_H	373	Methylamine dehydrogenase (heavy subunit); oxidore	98.95
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.93
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.92
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.91
3q7m_A	376	Lipoprotein YFGL, BAMB; beta-propeller, BAM comple	98.9
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.89
1kb0_A	677	Quinohemoprotein alcohol dehydrogenase; beta-prope	98.87
3iuj_A	693	Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas	98.87
2qe8_A	343	Uncharacterized protein; structural genomics, join	98.86
3hxj_A	330	Pyrrolo-quinoline quinone; all beta protein. incom	98.84
3c75_H	426	MADH, methylamine dehydrogenase heavy chain; coppe	98.83
1yiq_A	689	Quinohemoprotein alcohol dehydrogenase; electron t	98.83
2ece_A	462	462AA long hypothetical selenium-binding protein;	98.82
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.71
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.69
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.69
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.67
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.66
2p4o_A	306	Hypothetical protein; putative lactonase, structur	98.66
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.66
2iwa_A	266	Glutamine cyclotransferase; pyroglutamate, acyltra	98.64
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.6
1npe_A	267	Nidogen, entactin; glycoprotein, basement membrane	98.6
1mda_H	368	Methylamine dehydrogenase (heavy subunit); electro	98.57
4a2l_A	795	BT_4663, two-component system sensor histidine kin	98.56
3nol_A	262	Glutamine cyclotransferase; beta-propeller, glutam	98.55
3nok_A	268	Glutaminyl cyclase; beta-propeller, cyclotransfera	98.54
3mbr_X	243	Glutamine cyclotransferase; beta-propeller; 1.44A	98.49
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	98.48
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.46
2fp8_A	322	Strictosidine synthase; six bladed beta propeller	98.44
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	98.44
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.43
1fwx_A	595	Nitrous oxide reductase; beta-propeller domain, cu	98.41
3v9f_A	781	Two-component system sensor histidine kinase/RESP	98.38
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.35
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.33
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.28
1kv9_A	668	Type II quinohemoprotein alcohol dehydrogenase; el	98.27
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	98.25
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	98.24
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	98.19
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.12
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	98.08
2ad6_A	571	Methanol dehydrogenase subunit 1; PQQ configuratio	98.06
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	98.06
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	98.05
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	98.05
3amr_A	355	3-phytase; beta-propeller, phytate, MYO-inositol h	98.04
1flg_A	582	Protein (quinoprotein ethanol dehydrogenase); supe	97.97
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.97
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.93
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.92
2p4o_A	306	Hypothetical protein; putative lactonase, structur	97.9
1w6s_A	599	Methanol dehydrogenase subunit 1; anisotropic, ele	97.88
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.84
3tc9_A	430	Hypothetical hydrolase; 6-bladed beta-propeller, i	97.82
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	97.8
3qqz_A	255	Putative uncharacterized protein YJIK; MCSG, PSI-2	97.8
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	97.8
2xe4_A	751	Oligopeptidase B; hydrolase-inhibitor complex, hyd	97.8
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.77
1k3i_A	656	Galactose oxidase precursor; blade beta propeller,	97.74
2xbg_A	327	YCF48-like protein; photosynthesis, photosystem II	97.73
1ijq_A	316	LDL receptor, low-density lipoprotein receptor; be	97.61
3sov_A	318	LRP-6, low-density lipoprotein receptor-related pr	97.53
4hw6_A	433	Hypothetical protein, IPT/TIG domain protein; puta	97.52
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.5
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	97.5
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	97.49
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.35
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.33
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.32
3sre_A	355	PON1, serum paraoxonase; directed evolution, 6-bla	97.31
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	97.3
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	97.27
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	97.23
3kya_A	496	Putative phosphatase; structural genomics, joint c	97.05
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	97.05
2p9w_A	334	MAL S 1 allergenic protein; beta propeller; 1.35A	97.05
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.99
3ei3_A	1158	DNA damage-binding protein 1; UV-damage, DDB, nucl	96.93
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	96.88
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	96.84
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	96.81
2xn4_A	302	Kelch-like protein 2; structural protein, cytoskel	96.8
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	96.75
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	96.71
3s94_A	619	LRP-6, low-density lipoprotein receptor-related pr	96.59
2vpj_A	301	Kelch-like protein 12; adaptor protein, WNT signal	96.58
3kya_A	496	Putative phosphatase; structural genomics, joint c	96.55
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.53
4a0p_A	628	LRP6, LRP-6, low-density lipoprotein receptor-rela	96.5
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	96.32
3ii7_A	306	Kelch-like protein 7; protein-binding, kelch-repea	96.32
1zgk_A	308	Kelch-like ECH-associated protein 1; beta-propelle	96.2
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	96.09
4asc_A	315	Kelch repeat and BTB domain-containing protein 5;	96.08
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	96.05
3pbp_A	452	Nucleoporin NUP82; beta-propeller, mRNA export, mR	95.99
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.76
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	95.68
2uvk_A	357	YJHT; unknown function, hypothetical protein, sial	95.63
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	95.53
1tl2_A	236	L10, protein (tachylectin-2); animal lectin, horse	95.49
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	95.45
3a9g_A	354	Putative uncharacterized protein; PQQ dependent de	95.41
3ott_A	758	Two-component system sensor histidine kinase; beta	95.4
2woz_A	318	Kelch repeat and BTB domain-containing protein 10;	95.34
2g8s_A	353	Glucose/sorbosone dehydrogenases; bladed beta-prop	95.31
2ism_A	352	Putative oxidoreductase; BL41XU spring-8, bladed b	95.2
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.97
3qhy_B	282	Beta-lactamase inhibitory protein II; enyzme-inhib	94.97
1cru_A	454	Protein (soluble quinoprotein glucose dehydrogena;	94.0
2zwa_A	695	Leucine carboxyl methyltransferase 2; HET: SAH CIT	93.92
2xzh_A	365	Clathrin heavy chain 1; endocytosis, endocytosis i	93.86
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	93.76
1bpo_A	494	Protein (clathrin); clathrin endocytosis beta-prop	92.04
3ott_A	758	Two-component system sensor histidine kinase; beta	91.95
2be1_A	339	Serine/threonine-protein kinase/endoribonuclease;	91.64
3das_A	347	Putative oxidoreductase; aldose sugar dehydrogenas	90.35
3s25_A	302	Hypothetical 7-bladed beta-propeller-like protein;	89.22
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	86.87
1xi4_A	1630	Clathrin heavy chain; alpha-ZIG-ZAG, beta-propelle	86.34
3b7f_A	394	Glycosyl hydrolase, BNR repeat; 7-bladed beta-prop	86.29
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	85.09
3sbq_A	638	Nitrous-oxide reductase; beta-propeller, cupredoxi	83.57
4gq2_M	950	Nucleoporin NUP120; beta propeller alpha helical,	82.03
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	81.65

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=3.2e-44  Score=321.80  Aligned_cols=273  Identities=22%  Similarity=0.380  Sum_probs=236.5

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-  143 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-  143 (391)
                      ...|.+++.++.+          .+.++.+.+|.......  ...+.+|.+.|++++|+  +++|++|+.||+|++||+ 
T Consensus       113 ~~~~~p~~~~l~s----------~s~Dg~i~vwd~~~~~~--~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~  180 (410)
T 1vyh_C          113 RVIFHPVFSVMVS----------ASEDATIKVWDYETGDF--ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ  180 (410)
T ss_dssp             EEEECSSSSEEEE----------EESSSCEEEEETTTCCC--CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred             EEEEcCCCCEEEE----------EeCCCeEEEEECCCCcE--EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence            3467777766654          34688999998654332  34566899999999998  679999999999999999 


Q ss_pred             CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      ....+..+.+|...|.+++|   ++++.+|++|+.|++|++||++    ...++..+.+|...|.+++++|++.+|++|+
T Consensus       181 ~~~~~~~~~~h~~~V~~v~~---~p~~~~l~s~s~D~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s  253 (410)
T 1vyh_C          181 GFECIRTMHGHDHNVSSVSI---MPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCS  253 (410)
T ss_dssp             SSCEEECCCCCSSCEEEEEE---CSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCceeEEEcCCCCCEEEEEE---eCCCCEEEEEeCCCeEEEEECC----CCcEEEEEeCCCccEEEEEECCCCCEEEEEc
Confidence            45677788999999999999   7788999999999999999965    3457788899999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc------------------
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA------------------  285 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------------  285 (391)
                      .||.|++||+++                             ......+.+|...|.+++|+|                  
T Consensus       254 ~D~~v~vwd~~~-----------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  304 (410)
T 1vyh_C          254 NDQTVRVWVVAT-----------------------------KECKAELREHRHVVECISWAPESSYSSISEATGSETKKS  304 (410)
T ss_dssp             TTSCEEEEETTT-----------------------------CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred             CCCeEEEEECCC-----------------------------CceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence            999999999976                             335667889999999999986                  


Q ss_pred             ---CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107         286 ---VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE  361 (391)
Q Consensus       286 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~  361 (391)
                         +..+++|+.|+.|++||++++.++..+.+|. .|.+++|+|++++|++|+.|+.|++||++..+   +...+.+|..
T Consensus       305 ~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~---~~~~~~~h~~  381 (410)
T 1vyh_C          305 GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---CMKTLNAHEH  381 (410)
T ss_dssp             ---CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC---CCEEEECCSS
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---eEEEEcCCCC
Confidence               3469999999999999999999999998766 79999999999999999999999999998765   6678889999


Q ss_pred             cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         362 WVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .|++++|+| ++.+|+||+.||+|++|++|
T Consensus       382 ~v~~l~~~~-~~~~l~sgs~D~~i~vW~~r  410 (410)
T 1vyh_C          382 FVTSLDFHK-TAPYVVTGSVDQTVKVWECR  410 (410)
T ss_dssp             CEEEEEECS-SSSCEEEEETTSEEEEEC--
T ss_pred             cEEEEEEcC-CCCEEEEEeCCCcEEEEeCC
Confidence            999999999 56679999999999999986

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=1.2e-43  Score=309.66  Aligned_cols=239  Identities=17%  Similarity=0.283  Sum_probs=201.4

Q ss_pred             cCCCCcEEEEEec-CCEEEEEECCCeEEEEcCC-CceEE----eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         113 ILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRR-GEHKL----NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       113 ~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~-~~~~~----~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..|...|++++|+ .+.|++|+.||+|+|||+. ++...    ...+|.+.|++++|   ++++.+|++|+.||+|++||
T Consensus        79 ~~~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~---spdg~~l~sgs~d~~i~iwd  155 (344)
T 4gqb_B           79 VQTEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV---LSSGTQAVSGSKDICIKVWD  155 (344)
T ss_dssp             EEESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEE
T ss_pred             eccCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEE
Confidence            3477889999998 4589999999999999984 33322    34589999999999   77899999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      ++    ...++..+.+|...|.+++|+|++ .+|++|+.||.|++||+++++                            
T Consensus       156 ~~----~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~----------------------------  203 (344)
T 4gqb_B          156 LA----QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK----------------------------  203 (344)
T ss_dssp             TT----TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS----------------------------
T ss_pred             CC----CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc----------------------------
Confidence            65    457788999999999999999987 578999999999999998744                            


Q ss_pred             Cceeee--cCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcE
Q psy2107         266 TPLITL--KGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQI  339 (391)
Q Consensus       266 ~~~~~~--~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i  339 (391)
                       +...+  ..|...+.+++|+|.  ..+++|+.||.|++||+++++++.++..|. .|.+++|+|++ ++|++|+.|+.|
T Consensus       204 -~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i  282 (344)
T 4gqb_B          204 -PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSL  282 (344)
T ss_dssp             -CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred             -eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeE
Confidence             33333  345667899999953  357889999999999999999999998776 89999999997 589999999999


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|||+++++   + ..+.+|.+.|++++|+|++..+|+|||.||+|++|++.
T Consensus       283 ~vwd~~~~~---~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~  330 (344)
T 4gqb_B          283 AVLDSSLSE---L-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP  330 (344)
T ss_dssp             EEECTTCCE---E-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred             EEEECCCCc---E-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence            999997754   3 35789999999999999888889999999999999973

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4.1e-43  Score=304.03  Aligned_cols=260  Identities=17%  Similarity=0.249  Sum_probs=228.4

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      +.++.+++|............+.+|...|.+++++  +.++++++.||+|++||+ ++..+..+..|...+.+++|   +
T Consensus        55 s~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~---s  131 (321)
T 3ow8_A           55 SLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAF---S  131 (321)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEE---C
T ss_pred             cCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEE---C
Confidence            46889999987543222223467899999999998  569999999999999999 56677788889999999999   7


Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      +++.+|++|+.||.|++|+++    .......+..|...|.+++|+|++++|++|+.||.|++||+++            
T Consensus       132 pdg~~l~~g~~dg~v~i~~~~----~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~------------  195 (321)
T 3ow8_A          132 PDSQYLATGTHVGKVNIFGVE----SGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT------------  195 (321)
T ss_dssp             TTSSEEEEECTTSEEEEEETT----TCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT------------
T ss_pred             CCCCEEEEEcCCCcEEEEEcC----CCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC------------
Confidence            789999999999999999965    3345667788999999999999999999999999999999976            


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECC
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSP  325 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p  325 (391)
                                       .+.+..+.+|..+|.+++|+|++ .|++++.|+.|++||+++++....+..|. .|.+++|+|
T Consensus       196 -----------------~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp  258 (321)
T 3ow8_A          196 -----------------GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCP  258 (321)
T ss_dssp             -----------------TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred             -----------------CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECC
Confidence                             34567788999999999999765 58999999999999999999998888776 799999999


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++++|++|+.|+.|++||+++++   ++..+.+|...|.+++|+| ++.+|++++.||.|++||+
T Consensus       259 ~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~  319 (321)
T 3ow8_A          259 DDTHFVSSSSDKSVKVWDVGTRT---CVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDC  319 (321)
T ss_dssp             TSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEEC
T ss_pred             CCCEEEEEeCCCcEEEEeCCCCE---EEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence            99999999999999999998765   7788899999999999999 6678999999999999996

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=1.5e-42  Score=298.48  Aligned_cols=242  Identities=22%  Similarity=0.359  Sum_probs=212.2

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      .+.+|.+.|++++|+  +++|++|+.||+|++||+ ++..+..+..|..+|.+++|   ++++++|++|+.|++|++||+
T Consensus         8 ~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKF---IARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---EGGGTEEEEEETTSEEEEEET
T ss_pred             eecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEE---eCCCCEEEEECCCCEEEEEEC
Confidence            355799999999998  669999999999999999 55667788899999999999   557889999999999999996


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      .    ..+.+..+.+|...|.+++|+|++++|++|+.||.|++||++++.                            ..
T Consensus        85 ~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~----------------------------~~  132 (304)
T 2ynn_A           85 N----TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----------------------------AL  132 (304)
T ss_dssp             T----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT----------------------------EE
T ss_pred             C----CCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc----------------------------ch
Confidence            5    346778889999999999999999999999999999999997532                            24


Q ss_pred             eeeecCccCcccEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECC--CCCEEEEeeCCCcEEE
Q psy2107         268 LITLKGHKEAISAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSP--LSKLVITASADKQIRL  341 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p--~~~~l~~g~~dg~i~i  341 (391)
                      ...+.+|...|.+++|+| + ..|++|+.|++|++||++++.....+..+  ..+..++|+|  ++.+|++|+.|+.|++
T Consensus       133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i  212 (304)
T 2ynn_A          133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI  212 (304)
T ss_dssp             EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred             hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence            567789999999999996 3 46999999999999999988877666543  4788888876  6789999999999999


Q ss_pred             EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ||+++++   ++..+.+|...|.+++|+| ++.+|+||+.||+|++||++
T Consensus       213 Wd~~~~~---~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~  258 (304)
T 2ynn_A          213 WDYQTKS---CVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSS  258 (304)
T ss_dssp             EETTTTE---EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred             EeCCCCc---cceeeCCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECC
Confidence            9998765   7788999999999999999 66789999999999999974

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=3.7e-42  Score=300.93  Aligned_cols=271  Identities=17%  Similarity=0.308  Sum_probs=231.1

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++++++.+          .+.++.+.+|.......  ...+..|...|.+++|+  ++++++|+.|+.|++|++
T Consensus        59 ~~~~~s~d~~~l~s----------~s~Dg~v~iWd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~  126 (340)
T 1got_B           59 YAMHWGTDSRLLLS----------ASQDGKLIIWDSYTTNK--VHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL  126 (340)
T ss_dssp             EEEEECTTSSEEEE----------EETTTEEEEEETTTCCE--EEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred             EEEEECCCCCEEEE----------EeCCCcEEEEECCCCCc--ceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence            44678888887765          34688999997543222  33445699999999998  679999999999999998


Q ss_pred             CC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107         144 RG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ  218 (391)
Q Consensus       144 ~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  218 (391)
                      ..     .....+.+|.+.|.++.|.+   ++ .+++++.|++|++||++    ....+..+.+|...|.+++|+|++++
T Consensus       127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~---~~-~l~s~s~d~~i~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~  198 (340)
T 1got_B          127 KTREGNVRVSRELAGHTGYLSCCRFLD---DN-QIVTSSGDTTCALWDIE----TGQQTTTFTGHTGDVMSLSLAPDTRL  198 (340)
T ss_dssp             TTCSBSCEEEEEEECCSSCEEEEEEEE---TT-EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             ccCCCcceeEEEecCCCccEEEEEECC---CC-cEEEEECCCcEEEEECC----CCcEEEEEcCCCCceEEEEECCCCCE
Confidence            43     24456789999999999965   33 48999999999999964    34677888999999999999999999


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHT  297 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~  297 (391)
                      |++|+.||.|++||+++                             ..+...+.+|...|.+++|+|++ .|++++.|++
T Consensus       199 l~sg~~d~~v~~wd~~~-----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~  249 (340)
T 1got_B          199 FVSGACDASAKLWDVRE-----------------------------GMCRQTFTGHESDINAICFFPNGNAFATGSDDAT  249 (340)
T ss_dssp             EEEEETTSCEEEEETTT-----------------------------CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred             EEEEeCCCcEEEEECCC-----------------------------CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc
Confidence            99999999999999976                             34567788999999999999654 5999999999


Q ss_pred             EEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         298 LKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       298 i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      |++||+++++.+..+..+.   .+.+++|+|++++|++|+.|+.|++||+....   ....+.+|...|++++|+| ++.
T Consensus       250 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---~~~~~~~h~~~v~~~~~s~-dg~  325 (340)
T 1got_B          250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTD-DGM  325 (340)
T ss_dssp             EEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECT-TSS
T ss_pred             EEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc---EeeEeecCCCcEEEEEEcC-CCC
Confidence            9999999998887776543   79999999999999999999999999998766   6778899999999999999 667


Q ss_pred             EEEEeeCCCcEEEEe
Q psy2107         375 LFVSASFDNSVKLWD  389 (391)
Q Consensus       375 ~l~s~~~dg~v~iwd  389 (391)
                      +|+||+.||+|+|||
T Consensus       326 ~l~s~s~D~~i~iWd  340 (340)
T 1got_B          326 AVATGSWDSFLKIWN  340 (340)
T ss_dssp             CEEEEETTSCEEEEC
T ss_pred             EEEEEcCCccEEecC
Confidence            899999999999997

>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1

Probab=100.00  E-value=4.4e-42  Score=307.92  Aligned_cols=243  Identities=21%  Similarity=0.461  Sum_probs=218.5

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      ...+.+|.++|++++|+  +.++++|+.||+|+|||+ ++.....+.+|...|.+++|   ++++.+|++|+.||+|++|
T Consensus       101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~---~~~~~~l~sgs~D~~i~iw  177 (410)
T 1vyh_C          101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISF---DHSGKLLASCSADMTIKLW  177 (410)
T ss_dssp             SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEE---CTTSSEEEEEETTSCCCEE
T ss_pred             eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEE---cCCCCEEEEEeCCCeEEEE
Confidence            45667899999999998  569999999999999999 56777889999999999999   7788999999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      |+.    ...++..+.+|...|.+++|+|++++|++|+.|+.|++||+++                             .
T Consensus       178 d~~----~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~-----------------------------~  224 (410)
T 1vyh_C          178 DFQ----GFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-----------------------------G  224 (410)
T ss_dssp             ETT----SSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------------------------C
T ss_pred             eCC----CCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-----------------------------C
Confidence            964    4467788899999999999999999999999999999999976                             3


Q ss_pred             CceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCC-----------------
Q psy2107         266 TPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPL-----------------  326 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~-----------------  326 (391)
                      .++..+.+|...|.++.+++++ .+++|+.|++|++||+.++.....+..+. .+.+++|+|+                 
T Consensus       225 ~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  304 (410)
T 1vyh_C          225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKS  304 (410)
T ss_dssp             CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC----
T ss_pred             cEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhcccccccc
Confidence            4677888999999999999655 58999999999999999999988887665 8999999996                 


Q ss_pred             ---CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         327 ---SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       327 ---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                         +.+|++|+.|+.|++||++++.   ++..+.+|...|++++|+| ++.+|++|+.||.|++||++
T Consensus       305 ~~~g~~l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~  368 (410)
T 1vyh_C          305 GKPGPFLLSGSRDKTIKMWDVSTGM---CLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYK  368 (410)
T ss_dssp             ---CCEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCT
T ss_pred             CCCCCEEEEEeCCCeEEEEECCCCc---eEEEEECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence               6789999999999999998765   7778889999999999999 66789999999999999974

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=9.7e-42  Score=299.88  Aligned_cols=284  Identities=17%  Similarity=0.218  Sum_probs=221.5

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC--CCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEc
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS--PLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWT  142 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd  142 (391)
                      ....|++||++|++.-.+..+.    =++.+.+|......+..  .....+|...|++++|+ ...+++++.||+|+|||
T Consensus        46 ~~v~fSpDG~~las~s~d~~~~----wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd  121 (357)
T 4g56_B           46 GAVRYRRDGALLLAASSLSSRT----WGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWE  121 (357)
T ss_dssp             EEEEECSSSCEEEEEECSSSSS----CCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-
T ss_pred             EEEEECCCCCEEEEEcCCCCcc----ccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEee
Confidence            4468999999887632211111    14556666544332221  23345699999999998 45788899999999999


Q ss_pred             CCC-ceE----EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         143 RRG-EHK----LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       143 ~~~-~~~----~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      +.. +..    ....+|...|++++|   ++++.+|++|+.||.|++||++    ....+..+.+|...|.+++|+|++.
T Consensus       122 ~~~~~~~~~~~~~~~~h~~~V~~v~~---spdg~~l~sgs~dg~v~iwd~~----~~~~~~~~~~h~~~v~~v~~s~~~~  194 (357)
T 4g56_B          122 ILEKESLLVNKFAKYEHDDIVKTLSV---FSDGTQAVSGGKDFSVKVWDLS----QKAVLKSYNAHSSEVNCVAACPGKD  194 (357)
T ss_dssp             -------CCCCEEECCCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTCS
T ss_pred             ccccceeEEEeeccCCCCCCEEEEEE---CCCCCEEEEEeCCCeEEEEECC----CCcEEEEEcCCCCCEEEEEEccCCC
Confidence            843 222    234579999999999   7789999999999999999954    4567888999999999999999874


Q ss_pred             -EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEEC
Q psy2107         218 -QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSW  294 (391)
Q Consensus       218 -~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~  294 (391)
                       ++++++.||.|++||+++++..                           .......|...+.+++|+|+  ..|++|+.
T Consensus       195 ~~~~s~~~dg~v~~wd~~~~~~~---------------------------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~  247 (357)
T 4g56_B          195 TIFLSCGEDGRILLWDTRKPKPA---------------------------TRIDFCASDTIPTSVTWHPEKDDTFACGDE  247 (357)
T ss_dssp             SCEEEEETTSCEEECCTTSSSCB---------------------------CBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred             ceeeeeccCCceEEEECCCCcee---------------------------eeeeeccccccccchhhhhcccceEEEeec
Confidence             7899999999999999875432                           12233456778999999964  35888999


Q ss_pred             CCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID  372 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  372 (391)
                      |+.|++||+++++.+..+..+. .|.+++|+|++ ++|++|+.|+.|+|||+++++   +.. ..+|.+.|++++|+|.+
T Consensus       248 d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---~~~-~~~H~~~V~~vafsP~d  323 (357)
T 4g56_B          248 TGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---VFR-DLSHRDFVTGVAWSPLD  323 (357)
T ss_dssp             SSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---EEE-ECCCSSCEEEEEECSSS
T ss_pred             ccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---EeE-ECCCCCCEEEEEEeCCC
Confidence            9999999999999999988765 89999999987 589999999999999998754   444 44799999999999977


Q ss_pred             CCEEEEeeCCCcEEEEecC
Q psy2107         373 PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|+|||.||+|++||+.
T Consensus       324 ~~~l~s~s~Dg~v~iW~~~  342 (357)
T 4g56_B          324 HSKFTTVGWDHKVLHHHLP  342 (357)
T ss_dssp             TTEEEEEETTSCEEEEECC
T ss_pred             CCEEEEEcCCCeEEEEECC
Confidence            7899999999999999974

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=2e-41  Score=296.78  Aligned_cols=285  Identities=22%  Similarity=0.429  Sum_probs=230.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC-CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEc
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP-SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWT  142 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd  142 (391)
                      ...+|.++|+++++          .+.++.+++|........ ......+|.+.|++++|+  +++|++|+.|+++++|+
T Consensus        20 ~~l~~sp~g~~las----------~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~   89 (345)
T 3fm0_A           20 WFLAWNPAGTLLAS----------CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK   89 (345)
T ss_dssp             EEEEECTTSSCEEE----------EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred             EEEEECCCCCEEEE----------EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence            34689999988876          246788999987643211 112235799999999998  67999999999999999


Q ss_pred             CCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107         143 RRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF  219 (391)
Q Consensus       143 ~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l  219 (391)
                      ...   ..+..+.+|...|.+++|   ++++.+|++|+.|++|++||++.. ....++..+.+|...|.+++|+|++++|
T Consensus        90 ~~~~~~~~~~~~~~h~~~v~~v~~---sp~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~~h~~~v~~~~~~p~~~~l  165 (345)
T 3fm0_A           90 KNQDDFECVTTLEGHENEVKSVAW---APSGNLLATCSRDKSVWVWEVDEE-DEYECVSVLNSHTQDVKHVVWHPSQELL  165 (345)
T ss_dssp             ECCC-EEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEECTT-SCEEEEEEECCCCSCEEEEEECSSSSCE
T ss_pred             ccCCCeEEEEEccCCCCCceEEEE---eCCCCEEEEEECCCeEEEEECCCC-CCeEEEEEecCcCCCeEEEEECCCCCEE
Confidence            844   345678899999999999   778999999999999999997633 2446677888999999999999999999


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeE
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTL  298 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i  298 (391)
                      ++|+.|+.|++||.+.+.                           ..+...+.+|...|.+++|+|++ .|++++.|++|
T Consensus       166 ~s~s~d~~i~~w~~~~~~---------------------------~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v  218 (345)
T 3fm0_A          166 ASASYDDTVKLYREEEDD---------------------------WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTV  218 (345)
T ss_dssp             EEEETTSCEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred             EEEeCCCcEEEEEecCCC---------------------------EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeE
Confidence            999999999999986522                           12456788999999999999655 59999999999


Q ss_pred             EEEecccC---------------ceeEEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc------eEEEE
Q psy2107         299 KIWDAELG---------------GMKSEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA------IVKST  355 (391)
Q Consensus       299 ~iwd~~~~---------------~~~~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~------~~~~~  355 (391)
                      ++||....               .++..+..  ...|.+++|+|++..|++++.|+.|++|+.......      .....
T Consensus       219 ~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~  298 (345)
T 3fm0_A          219 RIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHL  298 (345)
T ss_dssp             EEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEE
T ss_pred             EEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeee
Confidence            99997432               22333432  347999999999999999999999999997653211      12234


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..+|...|++++|+|+++.+|+||+.||+|++|+++
T Consensus       299 ~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~  334 (345)
T 3fm0_A          299 HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ  334 (345)
T ss_dssp             TTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred             cccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence            568999999999999666799999999999999974

>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}

Probab=100.00  E-value=4e-41  Score=291.54  Aligned_cols=240  Identities=26%  Similarity=0.402  Sum_probs=212.7

Q ss_pred             ccCCCCcEEEEEec------CCEEEEEECCCeEEEEcCCCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         112 CILHDDWVSAIDFH------NDWILTGCYDHSVHIWTRRGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       112 ~~~h~~~V~~~~~~------~~~l~t~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      ..+|.+.|++++|+      +++|++|+.||+|+||++....   ...+.+|...|.+++|   ++++.++++++.|++|
T Consensus        28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~---~~~~~~l~s~s~D~~i  104 (321)
T 3ow8_A           28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDI---SHTLPIAASSSLDAHI  104 (321)
T ss_dssp             TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE---CSSSSEEEEEETTSEE
T ss_pred             cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEE---CCCCCEEEEEeCCCcE
Confidence            34799999999996      3589999999999999984432   3467899999999999   7788899999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ++||+.    ....+..+..|...+.+++|+|++++|++|+.||.|++|+++++                          
T Consensus       105 ~lWd~~----~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~--------------------------  154 (321)
T 3ow8_A          105 RLWDLE----NGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESG--------------------------  154 (321)
T ss_dssp             EEEETT----TTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTC--------------------------
T ss_pred             EEEECC----CCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCC--------------------------
Confidence            999965    34667788889999999999999999999999999999999763                          


Q ss_pred             CCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                         .....+..|...|.+++|+|++ .|++++.|+.|++||+++++.+..+..+. +|.+++|+|++++|++|+.|+.|+
T Consensus       155 ---~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~  231 (321)
T 3ow8_A          155 ---KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIK  231 (321)
T ss_dssp             ---SEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEE
T ss_pred             ---ceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEE
Confidence               3556677888999999999665 58999999999999999999999988765 899999999999999999999999


Q ss_pred             EEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +||++...   ....+.+|...|.+++|+| ++.+|++++.||+|++||++
T Consensus       232 iwd~~~~~---~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~  278 (321)
T 3ow8_A          232 IYDVQHAN---LAGTLSGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVG  278 (321)
T ss_dssp             EEETTTCC---EEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred             EEECCCcc---eeEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCC
Confidence            99998766   7778899999999999999 66789999999999999974

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-41  Score=293.09  Aligned_cols=270  Identities=20%  Similarity=0.360  Sum_probs=209.2

Q ss_pred             CccceEEEEEEeccCCCCCCcc-cC-CCCcEEEEEec--CCEEEEEECCCeEEEEcCC--------CceEEeccCCCCCe
Q psy2107          91 SSENVIDVEYLESTPTPSPLDC-IL-HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR--------GEHKLNIPGHGGPV  158 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~--------~~~~~~~~~~~~~v  158 (391)
                      +.++.+++|............+ .+ |.+.|++++|+  +++|++|+.|++|+|||+.        ......+.+|...|
T Consensus        31 ~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V  110 (330)
T 2hes_X           31 STDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV  110 (330)
T ss_dssp             ESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CE
T ss_pred             cCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcE
Confidence            4678899997653221111112 23 99999999998  6799999999999999983        23455778999999


Q ss_pred             eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCC
Q psy2107         159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                      .+++|   ++++.+|++|+.|++|++||++.......++..+.+|...|.+++|+|++++|++|+.|+.|++||..++. 
T Consensus       111 ~~v~~---sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~-  186 (330)
T 2hes_X          111 KGVAW---SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD-  186 (330)
T ss_dssp             EEEEE---CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-
T ss_pred             EEEEE---CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC-
Confidence            99999   77899999999999999999753334456788899999999999999999999999999999999986421 


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--C-eEEEEECCCeEEEEecccC--------c
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--D-EIITSSWDHTLKIWDAELG--------G  307 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~-~l~s~~~dg~i~iwd~~~~--------~  307 (391)
                                                ..++..+.+|...|.+++|+|+  + .+++++.|++|++||+..+        .
T Consensus       187 --------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~  240 (330)
T 2hes_X          187 --------------------------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV  240 (330)
T ss_dssp             --------------------------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred             --------------------------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence                                      2356788899999999999975  3 5899999999999999765        2


Q ss_pred             eeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCC-CCCEEEEeeCCC
Q psy2107         308 MKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPI-DPQLFVSASFDN  383 (391)
Q Consensus       308 ~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~-~~~~l~s~~~dg  383 (391)
                      ....+.  +...|.+++|++++ +|++|+.||.|++||...+..........+|.. .|++++|+|. ++.+|+||+.||
T Consensus       241 ~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg  319 (330)
T 2hes_X          241 CEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG  319 (330)
T ss_dssp             EEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred             EeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence            333333  33489999999755 899999999999999865432223334567887 8999999994 466899999999


Q ss_pred             cEEEEecC
Q psy2107         384 SVKLWDLR  391 (391)
Q Consensus       384 ~v~iwdlr  391 (391)
                      +|+|||++
T Consensus       320 ~v~~W~~~  327 (330)
T 2hes_X          320 IVNFWSLE  327 (330)
T ss_dssp             EEEEEEC-
T ss_pred             cEEEEEec
Confidence            99999974

>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A

Probab=100.00  E-value=2.1e-40  Score=285.13  Aligned_cols=275  Identities=20%  Similarity=0.316  Sum_probs=228.5

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++++.+.+          .+.++.+++|......  ....+..|..+|.+++|+  +++|++|+.|++|++||+
T Consensus        17 ~~~~fsp~~~~l~s----------~~~dg~v~lWd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~   84 (304)
T 2ynn_A           17 KGIDFHPTEPWVLT----------TLYSGRVELWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (304)
T ss_dssp             EEEEECSSSSEEEE----------EETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             EEEEECCCCCEEEE----------EcCCCcEEEEECCCCc--eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence            45789999987765          2357889999764322  123455799999999997  779999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFAT  221 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s  221 (391)
                       +++.+..+.+|...|.+++|   ++++.+|++|+.||+|++||++.   .......+.+|...|.+++|+| ++.+|++
T Consensus        85 ~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~sgs~D~~v~lWd~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s  158 (304)
T 2ynn_A           85 NTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFAS  158 (304)
T ss_dssp             TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEEGGG---TTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred             CCCcEEEEEeCCCCcEEEEEE---cCCCCEEEEECCCCeEEEEECCC---CcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence             67778889999999999999   77888999999999999999752   2245677889999999999999 6789999


Q ss_pred             EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--C-CeEEEEECCCeE
Q psy2107         222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--V-DEIITSSWDHTL  298 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~l~s~~~dg~i  298 (391)
                      |+.|+.|++||+++...                            ......+|...+..+.|.+  + ..+++++.|++|
T Consensus       159 gs~D~~v~iwd~~~~~~----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i  210 (304)
T 2ynn_A          159 GCLDRTVKVWSLGQSTP----------------------------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI  210 (304)
T ss_dssp             EETTSEEEEEETTCSSC----------------------------SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred             EeCCCeEEEEECCCCCc----------------------------cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence            99999999999975332                            2223345667889999984  3 469999999999


Q ss_pred             EEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC-EE
Q psy2107         299 KIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ-LF  376 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l  376 (391)
                      ++||+++++++.++..|. .+.+++|+|++++|++|+.||.|++||+++.+   +...+..|...+.+++|+|+++. ++
T Consensus       211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (304)
T 2ynn_A          211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---VEKTLNVGLERSWCIATHPTGRKNYI  287 (304)
T ss_dssp             EEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC---EEEEECCSSSSEEEEEECTTCGGGCE
T ss_pred             EEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc---eeeeccCCCccEEEEEECCCCCceEE
Confidence            999999999999998775 89999999999999999999999999998876   77888899999999999996654 47


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      ++|+.| .+.+|++
T Consensus       288 asg~~~-g~~~~~~  300 (304)
T 2ynn_A          288 ASGFDN-GFTVLSL  300 (304)
T ss_dssp             EEEETT-EEEEEEC
T ss_pred             EEecCC-ceEEEEe
Confidence            777655 5667765

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=1.8e-40  Score=284.64  Aligned_cols=250  Identities=20%  Similarity=0.324  Sum_probs=206.2

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      .+.+|.+.|++++|+  +++|++|+.||+|+|||+.+   ..+..+.+|.++|.+++|.|. .++.+|++|+.||+|++|
T Consensus         4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~-~~g~~l~s~s~D~~v~iW   82 (297)
T 2pm7_B            4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVMIW   82 (297)
T ss_dssp             ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCG-GGCSEEEEEETTTEEEEE
T ss_pred             eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCC-CcCCEEEEEcCCCEEEEE
Confidence            345799999999998  77999999999999999843   456788999999999999431 137899999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      |++  ......+..+.+|...|.+++|+|+  +.+|++|+.||.|++||+++...                         
T Consensus        83 d~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~-------------------------  135 (297)
T 2pm7_B           83 KEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGT-------------------------  135 (297)
T ss_dssp             EBS--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSC-------------------------
T ss_pred             EcC--CCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCc-------------------------
Confidence            965  3333455667889999999999997  88999999999999999976321                         


Q ss_pred             CCCceeeecCccCcccEEEeccC--------------CeEEEEECCCeEEEEecccCc----eeEEEECCe-eeEEEEEC
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAV--------------DEIITSSWDHTLKIWDAELGG----MKSEIVGNK-SFFDVHYS  324 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~--------------~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~-~i~~~~~~  324 (391)
                        .....+.+|...|.+++|+|.              ..|++|+.|++|++||++++.    ....+..|. .|.+++|+
T Consensus       136 --~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~s  213 (297)
T 2pm7_B          136 --TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS  213 (297)
T ss_dssp             --BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred             --eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEEC
Confidence              123456789999999999975              479999999999999998876    455666655 89999999


Q ss_pred             CCC---CEEEEeeCCCcEEEEcCCCCCcceEEEEe--ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         325 PLS---KLVITASADKQIRLYDPKVKEGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       325 p~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++   .+|++|+.|+.|++||++..........+  ..|...|.+++|+| ++.+|++++.||.|+||+.+
T Consensus       214 p~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~las~~~D~~v~lw~~~  284 (297)
T 2pm7_B          214 PTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN  284 (297)
T ss_dssp             CCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred             CCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECC-CCCEEEEEcCCCcEEEEEEC
Confidence            985   89999999999999998764322222333  56889999999999 56689999999999999863

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=1.2e-40  Score=292.80  Aligned_cols=272  Identities=18%  Similarity=0.295  Sum_probs=230.4

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++++.+++          .+.++.+.+|.......  ......|...|.+++|+  +..+++|+.|+.+++|++
T Consensus        68 ~~~~~s~d~~~l~s----------~s~Dg~v~vWd~~~~~~--~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~  135 (354)
T 2pbi_B           68 LCMDWCKDKRRIVS----------SSQDGKVIVWDSFTTNK--EHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL  135 (354)
T ss_dssp             EEEEECTTSSEEEE----------EETTSEEEEEETTTCCE--EEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred             EEEEECCCCCEEEE----------EeCCCeEEEEECCCCCc--ceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence            45688888877765          34688999997533221  23445688899999998  679999999999999987


Q ss_pred             CC-------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--
Q psy2107         144 RG-------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE--  214 (391)
Q Consensus       144 ~~-------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--  214 (391)
                      ..       .....+..|...|.+++|   ++++..|++++.||+|++||++    ...++..+.+|...|.+++|+|  
T Consensus       136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~t~s~D~~v~lwd~~----~~~~~~~~~~h~~~v~~~~~~~~~  208 (354)
T 2pbi_B          136 TFDKNENMAAKKKSVAMHTNYLSACSF---TNSDMQILTASGDGTCALWDVE----SGQLLQSFHGHGADVLCLDLAPSE  208 (354)
T ss_dssp             CCCTTCCSGGGCEEEEECSSCEEEEEE---CSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECCCS
T ss_pred             eccccccccccceeeeccCCcEEEEEE---eCCCCEEEEEeCCCcEEEEeCC----CCeEEEEEcCCCCCeEEEEEEeCC
Confidence            32       234566789999999999   7778899999999999999965    3467788999999999999988  


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEE
Q psy2107         215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSS  293 (391)
Q Consensus       215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~  293 (391)
                      ++++|++|+.||.|++||+++                             ..++..+.+|...|.+++|+|+ ..|++++
T Consensus       209 ~g~~l~sgs~Dg~v~~wd~~~-----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s  259 (354)
T 2pbi_B          209 TGNTFVSGGCDKKAMVWDMRS-----------------------------GQCVQAFETHESDVNSVRYYPSGDAFASGS  259 (354)
T ss_dssp             SCCEEEEEETTSCEEEEETTT-----------------------------CCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCCEEEEEeCCCeEEEEECCC-----------------------------CcEEEEecCCCCCeEEEEEeCCCCEEEEEe
Confidence            468999999999999999976                             3467778899999999999965 4699999


Q ss_pred             CCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      .|++|++||++.++.+..+..+.   .+.+++|+|++++|++|+.|+.|++||+..+.   .+..+.+|...|++++|+|
T Consensus       260 ~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~---~~~~l~~h~~~v~~l~~sp  336 (354)
T 2pbi_B          260 DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS---RVSILFGHENRVSTLRVSP  336 (354)
T ss_dssp             TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS---EEEEECCCSSCEEEEEECT
T ss_pred             CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc---eEEEEECCCCcEEEEEECC
Confidence            99999999999988777766443   68899999999999999999999999998766   6678889999999999999


Q ss_pred             CCCCEEEEeeCCCcEEEEe
Q psy2107         371 IDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       371 ~~~~~l~s~~~dg~v~iwd  389 (391)
                       ++.+|++|+.||+|+||+
T Consensus       337 -dg~~l~sgs~D~~v~vW~  354 (354)
T 2pbi_B          337 -DGTAFCSGSWDHTLRVWA  354 (354)
T ss_dssp             -TSSCEEEEETTSEEEEEC
T ss_pred             -CCCEEEEEcCCCCEEecC
Confidence             667899999999999996

>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*

Probab=100.00  E-value=5.4e-40  Score=287.19  Aligned_cols=245  Identities=18%  Similarity=0.275  Sum_probs=214.0

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|++++|+  +++|++|+.||+|++||. ++..+..+..|...|.+++|   ++++.++++|+.|+.+++|+
T Consensus        49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~s~~~d~~v~iw~  125 (340)
T 1got_B           49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY---APSGNYVACGGLDNICSIYN  125 (340)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEE---CTTSSEEEEEETTCEEEEEE
T ss_pred             eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEE---CCCCCEEEEEeCCCeEEEEE
Confidence            3456899999999998  669999999999999998 66777888899999999999   77899999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +............+.+|...|.++.|++++. +++++.|+.|++||+++                             ..
T Consensus       126 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~-----------------------------~~  175 (340)
T 1got_B          126 LKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIET-----------------------------GQ  175 (340)
T ss_dssp             TTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTT-----------------------------TE
T ss_pred             CccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCC-----------------------------Cc
Confidence            7655445567788899999999999998875 89999999999999976                             33


Q ss_pred             ceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         267 PLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      .+..+.+|...|.+++|+|++ .+++|+.|+.|++||++++.....+..|. .|.+++|+|++++|++|+.||.|++||+
T Consensus       176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~  255 (340)
T 1got_B          176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL  255 (340)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence            567788999999999999765 58999999999999999999999988765 8999999999999999999999999999


Q ss_pred             CCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +...   ....+.  .+...|++++|+| ++.+|++|+.||.|++||++
T Consensus       256 ~~~~---~~~~~~~~~~~~~v~~~~~s~-~g~~l~~g~~d~~i~vwd~~  300 (340)
T 1got_B          256 RADQ---ELMTYSHDNIICGITSVSFSK-SGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             TTTE---EEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             CCCc---EEEEEccCCcccceEEEEECC-CCCEEEEECCCCeEEEEEcc
Confidence            8754   333333  3345799999999 67799999999999999974

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=7.2e-40  Score=283.72  Aligned_cols=273  Identities=19%  Similarity=0.326  Sum_probs=227.2

Q ss_pred             ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCC---CCCcccCCCCcEEEEEec--CCEEEEEECCCeEE
Q psy2107          66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTP---SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVH  139 (391)
Q Consensus        66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~  139 (391)
                      ....|.+++ +++.+          .+.++.+.+|........   ....+.+|...|.+++|+  +++|++|+.||+|+
T Consensus        21 ~~l~~~~~~~~~l~s----------~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~   90 (319)
T 3frx_A           21 TSLATSAGQPNLLLS----------ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLR   90 (319)
T ss_dssp             EEEEECSSCTTEEEE----------EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEEEccCCCccEEEE----------ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEE
Confidence            345677654 55554          346889999987643321   123456899999999998  67999999999999


Q ss_pred             EEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---
Q psy2107         140 IWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES---  215 (391)
Q Consensus       140 iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---  215 (391)
                      +||+ +++....+.+|...|.+++|   ++++.+|++|+.|++|++||++     ..++..+.+|...|.+++|+|.   
T Consensus        91 ~wd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~D~~i~vwd~~-----~~~~~~~~~h~~~v~~~~~~~~~~~  162 (319)
T 3frx_A           91 LWDVATGETYQRFVGHKSDVMSVDI---DKKASMIISGSRDKTIKVWTIK-----GQCLATLLGHNDWVSQVRVVPNEKA  162 (319)
T ss_dssp             EEETTTTEEEEEEECCSSCEEEEEE---CTTSCEEEEEETTSCEEEEETT-----SCEEEEECCCSSCEEEEEECCC---
T ss_pred             EEECCCCCeeEEEccCCCcEEEEEE---cCCCCEEEEEeCCCeEEEEECC-----CCeEEEEeccCCcEEEEEEccCCCC
Confidence            9999 56677788999999999999   7789999999999999999953     2467788899999999999985   


Q ss_pred             ---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEE
Q psy2107         216 ---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIIT  291 (391)
Q Consensus       216 ---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s  291 (391)
                         +..|++++.|+.|++||+++                             ......+.+|...|.+++|+|++ .|++
T Consensus       163 ~~~~~~l~s~~~d~~i~~wd~~~-----------------------------~~~~~~~~~h~~~v~~~~~sp~g~~l~s  213 (319)
T 3frx_A          163 DDDSVTIISAGNDKMVKAWNLNQ-----------------------------FQIEADFIGHNSNINTLTASPDGTLIAS  213 (319)
T ss_dssp             ---CCEEEEEETTSCEEEEETTT-----------------------------TEEEEEECCCCSCEEEEEECTTSSEEEE
T ss_pred             CCCccEEEEEeCCCEEEEEECCc-----------------------------chhheeecCCCCcEEEEEEcCCCCEEEE
Confidence               44899999999999999976                             33566788999999999999765 5899


Q ss_pred             EECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe--------ccccCcE
Q psy2107         292 SSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF--------SSHKEWV  363 (391)
Q Consensus       292 ~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--------~~h~~~v  363 (391)
                      ++.||.|++||+.+++.+..+..+..+.+++|+|++.+|++++. +.+++|++....   ....+        ..|...+
T Consensus       214 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~-~~i~v~~~~~~~---~~~~~~~~~~~~~~~~~~~v  289 (319)
T 3frx_A          214 AGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATA-TGIKVFSLDPQY---LVDDLRPEFAGYSKAAEPHA  289 (319)
T ss_dssp             EETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEET-TEEEEEEETTEE---EEEEECCCCTTCCGGGCCCE
T ss_pred             EeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcC-CCcEEEEeCcCe---eeeccCccccccccCcCcce
Confidence            99999999999999999999999899999999999999998875 459999986533   33333        2356789


Q ss_pred             EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+++|+| ++++|++|+.||.|+|||+
T Consensus       290 ~~~~~sp-dg~~l~sg~~Dg~i~vWd~  315 (319)
T 3frx_A          290 VSLAWSA-DGQTLFAGYTDNVIRVWQV  315 (319)
T ss_dssp             EEEEECT-TSSEEEEEETTSCEEEEEE
T ss_pred             eEEEECC-CCCEEEEeecCceEEEEEE
Confidence            9999999 6678999999999999997

>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}

Probab=100.00  E-value=2.3e-40  Score=288.96  Aligned_cols=242  Identities=18%  Similarity=0.243  Sum_probs=197.4

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST  178 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~  178 (391)
                      ..|...|.+++|+  |.+|++++ |+++++||...            ........+...|.+++|+|   + ..|++|+.
T Consensus        27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~---d-~~l~~~s~  101 (344)
T 4gqb_B           27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG---E-RGILVASD  101 (344)
T ss_dssp             SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET---T-TEEEEEET
T ss_pred             ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC---C-CeEEEEEC
Confidence            3577889999998  66887777 77788886311            11112224567899999954   4 36889999


Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      ||+|++||++...........+.+|.+.|++++|+|++++|++|+.||.|++||+++                       
T Consensus       102 dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~-----------------------  158 (344)
T 4gqb_B          102 SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQ-----------------------  158 (344)
T ss_dssp             TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----------------------
T ss_pred             CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC-----------------------
Confidence            999999998754444444456678999999999999999999999999999999976                       


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECC---eeeEEEEECCC-CCEEEE
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPL-SKLVIT  332 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~-~~~l~~  332 (391)
                            .+++..+.+|...|.+++|++++  .|++++.|++|++||+++++....+...   ..+.+++|+|+ +++|++
T Consensus       159 ------~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~s  232 (344)
T 4gqb_B          159 ------QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVF  232 (344)
T ss_dssp             ------TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEE
T ss_pred             ------CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEE
Confidence                  44678889999999999999654  5889999999999999999988776433   36889999995 568899


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+.||.|++||+++++   ++..+.+|...|++++|+|++..+|+||+.||+|+|||++
T Consensus       233 g~~dg~v~~wd~~~~~---~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~  288 (344)
T 4gqb_B          233 GDENGTVSLVDTKSTS---CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS  288 (344)
T ss_dssp             EETTSEEEEEESCC-----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred             eccCCcEEEEECCCCc---EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence            9999999999998766   6778899999999999999776789999999999999974

>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.8e-40  Score=284.24  Aligned_cols=249  Identities=20%  Similarity=0.336  Sum_probs=201.0

Q ss_pred             ccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC---ceEEec-cC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG---EHKLNI-PG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       112 ~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~---~~~~~~-~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      +.+|.+.|.+++|++++|++|+.||+|++||+..   .....+ .+ |...|.+++|   +|++.+|++|+.|++|++|+
T Consensus        10 ~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~---sp~~~~las~s~D~~v~iw~   86 (330)
T 2hes_X           10 LKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW---RPHTSLLAAGSFDSTVSIWA   86 (330)
T ss_dssp             EECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE---CTTSSEEEEEETTSCEEEEE
T ss_pred             eccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE---CCCCCEEEEEeCCCcEEEEE
Confidence            4579999999999988999999999999999954   233344 34 9999999999   77889999999999999999


Q ss_pred             ecCCC---CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         187 WKVES---NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       187 ~~~~~---~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +....   .....+..+.+|...|.+++|+|++++|++|+.|+.|++||++....                         
T Consensus        87 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~-------------------------  141 (330)
T 2hes_X           87 KEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE-------------------------  141 (330)
T ss_dssp             C-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC-------------------------
T ss_pred             cccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC-------------------------
Confidence            64221   23456778899999999999999999999999999999999953211                         


Q ss_pred             CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC--ceeEEEECCe-eeEEEEECCC--CCEEEEeeCCC
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG--GMKSEIVGNK-SFFDVHYSPL--SKLVITASADK  337 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~-~i~~~~~~p~--~~~l~~g~~dg  337 (391)
                      ...++..+.+|...|.+++|+|++ .|++++.|++|++||..++  +++..+..|. .|.+++|+|+  +.+|++|+.|+
T Consensus       142 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~  221 (330)
T 2hes_X          142 EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS  221 (330)
T ss_dssp             CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred             CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence            123566788999999999999654 6999999999999999876  5667777665 8999999998  67899999999


Q ss_pred             cEEEEcCCCCCc-----ceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         338 QIRLYDPKVKEG-----AIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       338 ~i~iwd~~~~~~-----~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .|++||++....     ......+.+ |...|.+++|++ ++ +|++++.||.|+|||+
T Consensus       222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~  278 (330)
T 2hes_X          222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEE  278 (330)
T ss_dssp             CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEE
T ss_pred             eEEEEEecCCCccccceeEEeeecccccccceEEEEEcC-CC-EEEEEeCCCEEEEEEc
Confidence            999999864311     123444554 999999999997 54 6999999999999986

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=1.4e-39  Score=288.94  Aligned_cols=246  Identities=18%  Similarity=0.333  Sum_probs=199.3

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      .+.+|.+.|++++|+  +++|++|+.||+|+|||. ++.....+..|...|.+++|   ++++.+|++|+.|+.+++|++
T Consensus        61 ~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~---s~~g~~las~~~d~~v~iw~~  137 (380)
T 3iz6_a           61 TLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAF---APNGQSVACGGLDSACSIFNL  137 (380)
T ss_dssp             EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEE---CTTSSEEEECCSSSCCEEEEC
T ss_pred             cccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEE---CCCCCEEEEeeCCCcEEEEEC
Confidence            356899999999998  669999999999999998 56666777788888888888   555556666666666555554


Q ss_pred             cCC----------------------------------------------CCceeEEEEE-----ecCCCCeEEEEEcC-C
Q psy2107         188 KVE----------------------------------------------SNSIECIHVC-----RGHERGLETVTVSE-S  215 (391)
Q Consensus       188 ~~~----------------------------------------------~~~~~~~~~~-----~~~~~~v~~l~~~~-~  215 (391)
                      ...                                              ......+..+     .+|...|.+++|++ +
T Consensus       138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~  217 (380)
T 3iz6_a          138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN  217 (380)
T ss_dssp             CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred             CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence            210                                              0011233333     46888999999987 8


Q ss_pred             CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEEC
Q psy2107         216 RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSW  294 (391)
Q Consensus       216 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~  294 (391)
                      +++|++|+.||.|++||++..                            ...+..+.+|...|.+++|+|++ .|++|+.
T Consensus       218 ~~~l~sgs~D~~v~~wd~~~~----------------------------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~  269 (380)
T 3iz6_a          218 ANMFISGSCDTTVRLWDLRIT----------------------------SRAVRTYHGHEGDINSVKFFPDGQRFGTGSD  269 (380)
T ss_dssp             CCEEEEEETTSCEEEEETTTT----------------------------CCCCEEECCCSSCCCEEEECTTSSEEEEECS
T ss_pred             CCEEEEEECCCeEEEEECCCC----------------------------CcceEEECCcCCCeEEEEEecCCCeEEEEcC
Confidence            899999999999999999742                            23567788999999999999765 5999999


Q ss_pred             CCeEEEEecccCceeEEEECCe--------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe----ccccCc
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNK--------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF----SSHKEW  362 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~--------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~  362 (391)
                      |++|++||+++++.+..+..+.        .+.+++|+|+|++|++|+.||.|++||+...+   ....+    .+|.+.
T Consensus       270 D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~---~~~~~~~~~~~h~~~  346 (380)
T 3iz6_a          270 DGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE---MVLNLGTLQNSHEGR  346 (380)
T ss_dssp             SSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC---EEEEECCSCSSCCCC
T ss_pred             CCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc---eEEEEecccCCCCCc
Confidence            9999999999999888876532        37899999999999999999999999987765   44444    689999


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++++|+| ++.+|+||+.||+|+||++.
T Consensus       347 v~~l~~s~-dg~~l~sgs~D~~i~iW~~~  374 (380)
T 3iz6_a          347 ISCLGLSS-DGSALCTGSWDKNLKIWAFS  374 (380)
T ss_dssp             CCEEEECS-SSSEEEEECTTSCEEEEECC
T ss_pred             eEEEEECC-CCCEEEEeeCCCCEEEEecC
Confidence            99999999 66789999999999999974

>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}

Probab=100.00  E-value=3.8e-39  Score=282.27  Aligned_cols=247  Identities=21%  Similarity=0.400  Sum_probs=205.0

Q ss_pred             ccCCCC-cEEEEEec--CCEEEEEECCCeEEEEcCCCce----EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         112 CILHDD-WVSAIDFH--NDWILTGCYDHSVHIWTRRGEH----KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       112 ~~~h~~-~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      +.+|.+ .|.+++|+  +++|++|+.||+|+|||+.+..    .....+|...|.+++|   ++++.+|++|+.|+++++
T Consensus        11 ~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~---sp~g~~l~s~s~D~~v~i   87 (345)
T 3fm0_A           11 VPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW---SPCGNYLASASFDATTCI   87 (345)
T ss_dssp             ECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE---CTTSSEEEEEETTSCEEE
T ss_pred             ecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE---CCCCCEEEEEECCCcEEE
Confidence            346887 99999998  6799999999999999995442    1234689999999999   778999999999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      |++.  .....++..+.+|...|.+++|+|++++|++|+.|+.|++||++.+..                          
T Consensus        88 w~~~--~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~--------------------------  139 (345)
T 3fm0_A           88 WKKN--QDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE--------------------------  139 (345)
T ss_dssp             EEEC--CC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC--------------------------
T ss_pred             EEcc--CCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC--------------------------
Confidence            9965  345567888999999999999999999999999999999999976332                          


Q ss_pred             CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCce--eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGM--KSEIVGNK-SFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      ...+..+.+|...|.+++|+|++ .|++++.|+.|++||++++..  ...+..|. .|.+++|+|++++|++|+.|+.|+
T Consensus       140 ~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~  219 (345)
T 3fm0_A          140 YECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVR  219 (345)
T ss_dssp             EEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             eEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEE
Confidence            23456778899999999999655 599999999999999988753  45566554 899999999999999999999999


Q ss_pred             EEcCCCCCc------------ceEEEEecc-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         341 LYDPKVKEG------------AIVKSTFSS-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       341 iwd~~~~~~------------~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+......            ..++..+.+ |...|.+++|+| ++..|++++.|+.|++|++
T Consensus       220 iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~l~s~~~d~~i~vw~~  281 (345)
T 3fm0_A          220 IWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ-LTGALATACGDDAIRVFQE  281 (345)
T ss_dssp             EEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT-TTCCEEEEETTSCEEEEEE
T ss_pred             EeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec-CCCEEEEEeCCCeEEEEEe
Confidence            999643211            123344444 889999999999 5557999999999999986

>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=100.00  E-value=8e-39  Score=281.08  Aligned_cols=246  Identities=18%  Similarity=0.262  Sum_probs=211.5

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|++++|+  +.+|++|+.||+|+|||. ++.....+..|...|.+++|   +|++.++++|+.|+.+++|+
T Consensus        58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~---sp~g~~lasg~~d~~i~v~~  134 (354)
T 2pbi_B           58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAY---APSGCAIACGGLDNKCSVYP  134 (354)
T ss_dssp             EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEE---CTTSSEEEEESTTSEEEEEE
T ss_pred             EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEE---CCCCCEEEEeeCCCCEEEEE
Confidence            3456899999999998  669999999999999998 66677778889999999999   77899999999999999999


Q ss_pred             ecCCC--CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVES--NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +....  ........+.+|...|.+++|+|++..|++|+.|+.|++||+++                             
T Consensus       135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-----------------------------  185 (354)
T 2pbi_B          135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES-----------------------------  185 (354)
T ss_dssp             CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----------------------------
T ss_pred             EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-----------------------------
Confidence            75331  11233456678999999999999999999999999999999976                             


Q ss_pred             CCceeeecCccCcccEEEecc---CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         265 RTPLITLKGHKEAISAVQWTA---VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~---~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      ...+..+.+|...|.+++|++   +..|++|+.||.|++||+++++++..+..|. .|.+++|+|++++|++|+.|+.|+
T Consensus       186 ~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~  265 (354)
T 2pbi_B          186 GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCR  265 (354)
T ss_dssp             CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred             CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEE
Confidence            346778889999999999985   2579999999999999999999999888665 899999999999999999999999


Q ss_pred             EEcCCCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +||++...   ....+.  .+...+++++|+| ++.+|++|+.|+.|++||++
T Consensus       266 lwd~~~~~---~~~~~~~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~  314 (354)
T 2pbi_B          266 LYDLRADR---EVAIYSKESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVL  314 (354)
T ss_dssp             EEETTTTE---EEEEECCTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred             EEECCCCc---EEEEEcCCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECC
Confidence            99998754   333333  3345789999999 67799999999999999974

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=3.5e-40  Score=285.32  Aligned_cols=250  Identities=20%  Similarity=0.312  Sum_probs=198.2

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      .+.+|.+.|++++|+  +++|++|+.|++|+|||+...   .+..+.+|.+.|.+++|.|. .++.+|++|+.|++|++|
T Consensus         8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~-~~~~~l~s~s~D~~v~iW   86 (316)
T 3bg1_A            8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHP-MYGNILASCSYDRKVIIW   86 (316)
T ss_dssp             ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCG-GGSSCEEEEETTSCEEEE
T ss_pred             ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCC-CCCCEEEEEECCCEEEEE
Confidence            345799999999998  789999999999999999432   35678899999999999431 147799999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      |++  .........+.+|...|.+++|+|+  +.+|++|+.||.|++||++....                         
T Consensus        87 d~~--~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~-------------------------  139 (316)
T 3bg1_A           87 REE--NGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQ-------------------------  139 (316)
T ss_dssp             CCS--SSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSC-------------------------
T ss_pred             ECC--CCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCC-------------------------
Confidence            965  3334566778899999999999997  78999999999999999975321                         


Q ss_pred             CCCceeeecCccCcccEEEeccC------------------CeEEEEECCCeEEEEecccC---ceeEEEECCe-eeEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAV------------------DEIITSSWDHTLKIWDAELG---GMKSEIVGNK-SFFDV  321 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~------------------~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~-~i~~~  321 (391)
                       ......+.+|...|.+++|+|.                  ..|++|+.|++|++||++..   +....+..|. .|.++
T Consensus       140 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v  218 (316)
T 3bg1_A          140 -WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDV  218 (316)
T ss_dssp             -EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEE
T ss_pred             -cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEE
Confidence             0123345678888999999865                  46999999999999999755   3455566554 89999


Q ss_pred             EECCCC----CEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         322 HYSPLS----KLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       322 ~~~p~~----~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+|++    ++|++|+.|++|++|++..... ......+..|...|.+++|+| ++.+|++++.||+|++|++
T Consensus       219 ~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp-~g~~las~~~D~~v~lw~~  291 (316)
T 3bg1_A          219 AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSI-TANILAVSGGDNKVTLWKE  291 (316)
T ss_dssp             ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECT-TTCCEEEEESSSCEEEEEE
T ss_pred             EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEE
Confidence            999986    7999999999999999876321 111223456889999999999 5668999999999999985

>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*

Probab=100.00  E-value=1.3e-38  Score=275.88  Aligned_cols=237  Identities=23%  Similarity=0.391  Sum_probs=205.2

Q ss_pred             cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      .+.+|.++|++++|+   +++|++|+.||+|++|++.+      ..+..+.+|...|.+++|   ++++.+|++|+.|++
T Consensus        12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~---s~dg~~l~s~s~D~~   88 (319)
T 3frx_A           12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL---TADGAYALSASWDKT   88 (319)
T ss_dssp             EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred             EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE---CCCCCEEEEEeCCCE
Confidence            356899999999997   36999999999999999832      345678899999999999   788999999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      |++||+.    ..+.+..+.+|...|.+++|+|++.+|++|+.|+.|++||++.                          
T Consensus        89 v~~wd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--------------------------  138 (319)
T 3frx_A           89 LRLWDVA----TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--------------------------  138 (319)
T ss_dssp             EEEEETT----TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--------------------------
T ss_pred             EEEEECC----CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--------------------------
Confidence            9999964    4467788999999999999999999999999999999999853                          


Q ss_pred             CCCCCceeeecCccCcccEEEeccCC-------eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEe
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVD-------EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITA  333 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~-------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g  333 (391)
                          ..+..+.+|...|.++.|.|..       .+++++.|+.|++||+++++....+..|. .|.+++|+|++++|++|
T Consensus       139 ----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~  214 (319)
T 3frx_A          139 ----QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA  214 (319)
T ss_dssp             ----CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred             ----CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence                3566788999999999998642       59999999999999999998888887665 89999999999999999


Q ss_pred             eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.||.|++||++..+   .+..+.. ...|.+++|+| ++.++++++. +.+++|++
T Consensus       215 ~~dg~i~iwd~~~~~---~~~~~~~-~~~v~~~~~sp-~~~~la~~~~-~~i~v~~~  265 (319)
T 3frx_A          215 GKDGEIMLWNLAAKK---AMYTLSA-QDEVFSLAFSP-NRYWLAAATA-TGIKVFSL  265 (319)
T ss_dssp             ETTCEEEEEETTTTE---EEEEEEC-CSCEEEEEECS-SSSEEEEEET-TEEEEEEE
T ss_pred             eCCCeEEEEECCCCc---EEEEecC-CCcEEEEEEcC-CCCEEEEEcC-CCcEEEEe
Confidence            999999999998765   5556654 46899999999 6677887775 46999986

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=3e-39  Score=304.07  Aligned_cols=274  Identities=18%  Similarity=0.270  Sum_probs=225.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++|+.++..           ..+.+.+|....  ......+.+|.+.|++++|+  |++||+|+.||+|+|||+
T Consensus        22 ~~~~~spdg~~l~~~-----------~~~~v~l~~~~~--~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~   88 (611)
T 1nr0_A           22 VVLGNTPAGDKIQYC-----------NGTSVYTVPVGS--LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT   88 (611)
T ss_dssp             CCCEECTTSSEEEEE-----------ETTEEEEEETTC--SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred             eEEeeCCCCCEEEeC-----------CCCEEEEecCCC--cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeEC
Confidence            456899999877641           345778886532  22344567899999999998  679999999999999998


Q ss_pred             C---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC
Q psy2107         144 R---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR  216 (391)
Q Consensus       144 ~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~  216 (391)
                      .   ......+.+|.++|.+++|   ++++.+|++++.+    +.|++||.  .    .....+.+|...|.+++|+|++
T Consensus        89 ~~~~~~~~~~~~~~~~~v~~v~f---s~dg~~l~~~~~~~~~~~~v~~wd~--~----~~~~~l~gh~~~v~~v~f~p~~  159 (611)
T 1nr0_A           89 TQTTHILKTTIPVFSGPVKDISW---DSESKRIAAVGEGRERFGHVFLFDT--G----TSNGNLTGQARAMNSVDFKPSR  159 (611)
T ss_dssp             SSTTCCEEEEEECSSSCEEEEEE---CTTSCEEEEEECCSSCSEEEEETTT--C----CBCBCCCCCSSCEEEEEECSSS
T ss_pred             CCCcceeeEeecccCCceEEEEE---CCCCCEEEEEECCCCceeEEEEeeC--C----CCcceecCCCCCceEEEECCCC
Confidence            3   2344577889999999999   7789999998875    47888872  2    2345678999999999999998


Q ss_pred             C-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEEC
Q psy2107         217 Q-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSW  294 (391)
Q Consensus       217 ~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~  294 (391)
                      . .|++|+.|+.|++||..+                             .+....+.+|...|.+++|+|++ .|++++.
T Consensus       160 ~~~l~s~s~D~~v~lwd~~~-----------------------------~~~~~~l~~H~~~V~~v~fspdg~~las~s~  210 (611)
T 1nr0_A          160 PFRIISGSDDNTVAIFEGPP-----------------------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGG  210 (611)
T ss_dssp             SCEEEEEETTSCEEEEETTT-----------------------------BEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred             CeEEEEEeCCCeEEEEECCC-----------------------------CeEeeeeccccCceEEEEECCCCCEEEEEEC
Confidence            6 699999999999999865                             33567788999999999999765 5899999


Q ss_pred             CCeEEEEecccCceeEEEE--------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc----------------
Q psy2107         295 DHTLKIWDAELGGMKSEIV--------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA----------------  350 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~--------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~----------------  350 (391)
                      |++|++||+.+++....+.        +...|.+++|+|++++|++|+.|++|++||+++++..                
T Consensus       211 D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~  290 (611)
T 1nr0_A          211 DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI  290 (611)
T ss_dssp             TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEE
T ss_pred             CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEE
Confidence            9999999999999888773        3348999999999999999999999999998764311                


Q ss_pred             ------------------------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         351 ------------------------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       351 ------------------------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                              .....+.+|...|++++|+| ++.+|++++.||+|++||++
T Consensus       291 ~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~  354 (611)
T 1nr0_A          291 IWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS  354 (611)
T ss_dssp             EECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETT
T ss_pred             EEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECC
Confidence                                    12234568999999999999 66789999999999999974

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=7.4e-39  Score=285.54  Aligned_cols=244  Identities=20%  Similarity=0.386  Sum_probs=197.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      +...|++++|+  +++|++|+.||.|++||+. ++....+.+|...|.+++|   ++++.+|++|+.|++|++||++   
T Consensus       122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~---~p~~~~l~s~s~d~~v~iwd~~---  195 (393)
T 1erj_A          122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDLR---  195 (393)
T ss_dssp             CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT---
T ss_pred             CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEE---cCCCCEEEEecCCCcEEEEECC---
Confidence            44569999998  6799999999999999994 5566788899999999999   7788999999999999999965   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                       ...+...+. +...+.+++|+| ++++|++|+.||.|++||++++......                      ......
T Consensus       196 -~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~----------------------~~~~~~  251 (393)
T 1erj_A          196 -TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL----------------------DSENES  251 (393)
T ss_dssp             -TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE----------------------C-----
T ss_pred             -CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee----------------------cccccC
Confidence             234444554 567899999999 8999999999999999999764421100                      001112


Q ss_pred             ecCccCcccEEEeccCC-eEEEEECCCeEEEEecccC------------ceeEEEECCe-eeEEEEECCCCCEEEEeeCC
Q psy2107         271 LKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELG------------GMKSEIVGNK-SFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~------------~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~d  336 (391)
                      ..+|...|.+++|++++ .|++++.|+.|++||+++.            .+...+..|. .|.+++|+|++.+|++|+.|
T Consensus       252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D  331 (393)
T 1erj_A          252 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKD  331 (393)
T ss_dssp             -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETT
T ss_pred             CCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCC
Confidence            25799999999999655 5999999999999999763            3344555554 79999999999999999999


Q ss_pred             CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC-----CCCEEEEeeCCCcEEEEecC
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-----DPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.|++||+++++   .+..+.+|...|.+++|++.     ++.+|+||+.||+|+||+++
T Consensus       332 ~~v~iwd~~~~~---~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~  388 (393)
T 1erj_A          332 RGVLFWDKKSGN---PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK  388 (393)
T ss_dssp             SEEEEEETTTCC---EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred             CeEEEEECCCCe---EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence            999999998776   67788999999999999873     35689999999999999973

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.4e-38  Score=272.62  Aligned_cols=273  Identities=22%  Similarity=0.377  Sum_probs=226.6

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++++.+++          .+.++.+.+|......  ....+.+|...|.+++|+  +++|++|+.||.|++||+
T Consensus        27 ~~~~~s~~~~~l~s----------~~~dg~i~iw~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~   94 (312)
T 4ery_A           27 SSVKFSPNGEWLAS----------SSADKLIKIWGAYDGK--FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV   94 (312)
T ss_dssp             EEEEECTTSSEEEE----------EETTSCEEEEETTTCC--EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEEECCCCCEEEE----------eeCCCeEEEEeCCCcc--cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence            45688889887765          2357788888753322  233456799999999998  679999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                       ++..+..+.+|...|.+++|   ++++.++++|+.||.|++||++    ....+..+..|...|.+++|+|++++|++|
T Consensus        95 ~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~  167 (312)
T 4ery_A           95 SSGKCLKTLKGHSNYVFCCNF---NPQSNLIVSGSFDESVRIWDVK----TGKCLKTLPAHSDPVSAVHFNRDGSLIVSS  167 (312)
T ss_dssp             TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred             CCCcEEEEEcCCCCCEEEEEE---cCCCCEEEEEeCCCcEEEEECC----CCEEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence             56677788899999999999   7788999999999999999965    345677888999999999999999999999


Q ss_pred             eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCccCcccEEEeccCC-eEEEEECCCeEEE
Q psy2107         223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHKEAISAVQWTAVD-EIITSSWDHTLKI  300 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~l~s~~~dg~i~i  300 (391)
                      +.||.|++||+++++                             .+..+ ..+...+..++|+|++ .+++++.|+.|++
T Consensus       168 ~~d~~i~~wd~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i  218 (312)
T 4ery_A          168 SYDGLCRIWDTASGQ-----------------------------CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL  218 (312)
T ss_dssp             ETTSCEEEEETTTCC-----------------------------EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred             eCCCcEEEEECCCCc-----------------------------eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEE
Confidence            999999999997633                             23333 3566789999999655 5899999999999


Q ss_pred             EecccCceeEEEECCe----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         301 WDAELGGMKSEIVGNK----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       301 wd~~~~~~~~~~~~~~----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      ||+++++.+..+..+.    .+......+++.+|++|+.||.|++||+...+   ++..+.+|...|.+++|+| ++.++
T Consensus       219 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~p-~~~~l  294 (312)
T 4ery_A          219 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE---IVQKLQGHTDVVISTACHP-TENII  294 (312)
T ss_dssp             EETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC---EEEEECCCSSCEEEEEECS-SSSEE
T ss_pred             EECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch---hhhhhhccCCcEEEEeecC-cCCce
Confidence            9999999988887664    23333344678999999999999999998776   7788999999999999999 66788


Q ss_pred             EEee--CCCcEEEEec
Q psy2107         377 VSAS--FDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~--~dg~v~iwdl  390 (391)
                      ++++  .|++|++|+.
T Consensus       295 ~s~~~~~d~~i~~W~~  310 (312)
T 4ery_A          295 ASAALENDKTIKLWKS  310 (312)
T ss_dssp             EEEECTTTCCEEEEEC
T ss_pred             EEEEccCCccEEEecC
Confidence            8887  6999999986

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=6.2e-39  Score=280.85  Aligned_cols=259  Identities=19%  Similarity=0.346  Sum_probs=210.2

Q ss_pred             CccceEEEEEEeccCCC-----CCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEE
Q psy2107          91 SSENVIDVEYLESTPTP-----SPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVA  162 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~-----~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~  162 (391)
                      +.++.+++|........     ....+.+|...|++++|+  +.++++|+.||+|++||+ ++..+..+.+|...|.+++
T Consensus        46 s~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~  125 (343)
T 2xzm_R           46 SRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVA  125 (343)
T ss_dssp             ETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred             cCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence            46789999987543221     123456899999999998  669999999999999999 5677778899999999999


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe---cCCCCeEEEEEcCCC----------CEEEEEeCCCcEE
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR---GHERGLETVTVSESR----------QQFATGGWDCLLK  229 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~----------~~l~sg~~dg~i~  229 (391)
                      |   ++++.+|++|+.|++|++||+.  .   .......   +|...|.+++|+|++          .+|++++.||.|+
T Consensus       126 ~---sp~~~~l~s~~~d~~i~~wd~~--~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~  197 (343)
T 2xzm_R          126 F---SPDNRQILSAGAEREIKLWNIL--G---ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK  197 (343)
T ss_dssp             E---CSSTTEEEEEETTSCEEEEESS--S---CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred             E---CCCCCEEEEEcCCCEEEEEecc--C---CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence            9   7788999999999999999964  2   1222222   688999999999986          7899999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc-cCc
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE-LGG  307 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~-~~~  307 (391)
                      +||..                              ......+.+|...|.+++|+|++ .|++|+.|+.|++||+. ...
T Consensus       198 iwd~~------------------------------~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~  247 (343)
T 2xzm_R          198 VWNTN------------------------------FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTY  247 (343)
T ss_dssp             EEETT------------------------------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSS
T ss_pred             EEcCC------------------------------CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcc
Confidence            99953                              22456778999999999999765 59999999999999994 455


Q ss_pred             eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-----------cccCcEEEEEECCCCCCEE
Q psy2107         308 MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-----------SHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-----------~h~~~v~~~~~~~~~~~~l  376 (391)
                      ....+.....+.+++|+|++.++++| .|+.|++||+.+..... ...+.           +|...|++++|+| ++.+|
T Consensus       248 ~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l  324 (343)
T 2xzm_R          248 PQREFDAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAP-VCTIEAEPITKAEGQKGKNPQCTSLAWNA-LGKKL  324 (343)
T ss_dssp             CSEEEECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCS-EEECCCCSGGGBTTBCCSCCCEEEEEECS-SSCCE
T ss_pred             cceeecCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCc-eEEeecCcchhhhhhcCCCCceEEEEECC-CCCeE
Confidence            56666666789999999999988766 47889999987654322 11222           6888999999999 55679


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      ++|+.||.|++||+
T Consensus       325 ~sg~~Dg~v~~w~~  338 (343)
T 2xzm_R          325 FAGFTDGVIRTFSF  338 (343)
T ss_dssp             EEEETTSEEEEEEE
T ss_pred             EEecCCceEEEEEE
Confidence            99999999999997

>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...

Probab=100.00  E-value=3.2e-38  Score=272.79  Aligned_cols=243  Identities=26%  Similarity=0.487  Sum_probs=210.3

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|++++|+  +++|++|+.||.|++|+. ++.....+.+|...|.+++|   ++++++|++|+.||.|++||
T Consensus        17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~d~~i~vwd   93 (312)
T 4ery_A           17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAW---SSDSNLLVSASDDKTLKIWD   93 (312)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEE
T ss_pred             EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEE---cCCCCEEEEECCCCEEEEEE
Confidence            3456899999999998  669999999999999999 56777788899999999999   77899999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      ++    ...++..+.+|...|.+++|+|++++|++|+.||.|++||+++                             .+
T Consensus        94 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------------------------~~  140 (312)
T 4ery_A           94 VS----SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-----------------------------GK  140 (312)
T ss_dssp             TT----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-----------------------------CC
T ss_pred             CC----CCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----------------------------CE
Confidence            65    3456788899999999999999999999999999999999976                             33


Q ss_pred             ceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEeeCCCcEEEEc
Q psy2107         267 PLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITASADKQIRLYD  343 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd  343 (391)
                      .+..+..|..+|.+++|++++ .+++++.|+.|++||+++++.+..+...  .++..++|+|++++|++++.|+.|++||
T Consensus       141 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd  220 (312)
T 4ery_A          141 CLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD  220 (312)
T ss_dssp             EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred             EEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence            567788899999999999654 6899999999999999999888776533  3789999999999999999999999999


Q ss_pred             CCCCCcceEEEEeccccCcEE--EEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         344 PKVKEGAIVKSTFSSHKEWVQ--SVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       344 ~~~~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++..+   ....+.+|...+.  ...+++.++.+|++|+.||.|++||++
T Consensus       221 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~  267 (312)
T 4ery_A          221 YSKGK---CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ  267 (312)
T ss_dssp             TTTTE---EEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred             CCCCc---EEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence            98765   6677777766433  334554477899999999999999974

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=2.7e-38  Score=296.42  Aligned_cols=266  Identities=27%  Similarity=0.440  Sum_probs=228.9

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR  144 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~  144 (391)
                      ...|.++++.+.+          .+.++.+++|...   ......+.+|...|.+++|+  ++++++++.||.|++||.+
T Consensus       308 ~~~~~~~~~~l~t----------~~~d~~i~~w~~~---~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~  374 (577)
T 2ymu_A          308 GVAFSPDGQTIAS----------ASDDKTVKLWNRN---GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN  374 (577)
T ss_dssp             EEEECTTSSEEEE----------EETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred             EEEECCCCCEEEE----------EeCCCeEEEEeCC---CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC
Confidence            4577778776654          2356778888642   22234556799999999998  6699999999999999999


Q ss_pred             CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         145 GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      ++.+..+.+|...|.+++|   ++++.+|++++.|+.|++||.     ..+.+..+.+|...|++++|+|++++|++++.
T Consensus       375 ~~~~~~~~~~~~~v~~~~~---s~dg~~l~~~~~d~~v~~~~~-----~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~  446 (577)
T 2ymu_A          375 GQLLQTLTGHSSSVRGVAF---SPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVWGVAFSPDDQTIASASD  446 (577)
T ss_dssp             CCEEEEEECCSSCEEEEEE---CTTSSCEEEEETTSEEEEECT-----TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             CCEEEEecCCCCCeEEEEE---CCCCCEEEEEeCCCEEEEEeC-----CCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence            8888999999999999999   778999999999999999983     23567788899999999999999999999999


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEec
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDA  303 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~  303 (391)
                      |+.|++||...                              +.+..+.+|...|.+++|+|++ .|++++.|+.|++||.
T Consensus       447 d~~v~~w~~~~------------------------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~  496 (577)
T 2ymu_A          447 DKTVKLWNRNG------------------------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR  496 (577)
T ss_dssp             TSEEEEEETTS------------------------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred             CCEEEEEECCC------------------------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence            99999999742                              3566788999999999999765 5889999999999995


Q ss_pred             ccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         304 ELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       304 ~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                       +++.+..+..|. .|.+++|+|++++|++++.|+.|++||. +++   ++..+.+|.+.|++++|+| ++++|+|++.|
T Consensus       497 -~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~---~~~~~~~h~~~v~~~~fs~-dg~~l~s~~~D  570 (577)
T 2ymu_A          497 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ---LLQTLTGHSSSVWGVAFSP-DGQTIASASSD  570 (577)
T ss_dssp             -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC---EEEEEECCSSCEEEEEECT-TSSCEEEEETT
T ss_pred             -CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCC---EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCC
Confidence             678888888765 8999999999999999999999999996 333   6778899999999999999 56679999999


Q ss_pred             CcEEEEe
Q psy2107         383 NSVKLWD  389 (391)
Q Consensus       383 g~v~iwd  389 (391)
                      |+|++||
T Consensus       571 ~~i~~Wd  577 (577)
T 2ymu_A          571 KTVKLWN  577 (577)
T ss_dssp             SCEEEEC
T ss_pred             CEEEEeC
Confidence            9999998

>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}

Probab=100.00  E-value=7.2e-39  Score=281.60  Aligned_cols=243  Identities=16%  Similarity=0.230  Sum_probs=196.6

Q ss_pred             cCCCCcEEEEEec--CCEEEEEEC------CCeEEEEcCC-Cce----EEeccCCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCY------DHSVHIWTRR-GEH----KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD  179 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~------dg~i~iwd~~-~~~----~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d  179 (391)
                      ..|...|++++|+  |++|++|+.      ||.|++|+.. +..    .....+|...|.+++|+   +++. +++++.|
T Consensus        39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s---~d~~-~l~~s~d  114 (357)
T 4g56_B           39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWV---SEKG-ILVASDS  114 (357)
T ss_dssp             -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEE---TTTE-EEEEETT
T ss_pred             ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEc---CCCC-EEEEECC
Confidence            4699999999998  679999997      7889999873 322    22334688999999995   4554 5678889


Q ss_pred             CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      |+|++||+..............+|...|.+++|+|++++|++|+.||.|++||+++                        
T Consensus       115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~------------------------  170 (357)
T 4g56_B          115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ------------------------  170 (357)
T ss_dssp             SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT------------------------
T ss_pred             CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC------------------------
Confidence            99999997643322222344568999999999999999999999999999999976                        


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEEC---CeeeEEEEECCC-CCEEEEe
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVG---NKSFFDVHYSPL-SKLVITA  333 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~~i~~~~~~p~-~~~l~~g  333 (391)
                           ...+..+.+|...|.+++|++++  .+++++.|+.|++||+++++....+..   ...+.+++|+|+ +.+|++|
T Consensus       171 -----~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g  245 (357)
T 4g56_B          171 -----KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACG  245 (357)
T ss_dssp             -----TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred             -----CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEe
Confidence                 34677888999999999999543  589999999999999999887766543   337899999998 5689999


Q ss_pred             eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.|+.|++||+++.+   ....+.+|...|++++|+|+++.+|++|+.||+|+|||++
T Consensus       246 ~~d~~i~~wd~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~  300 (357)
T 4g56_B          246 DETGNVSLVNIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD  300 (357)
T ss_dssp             ESSSCEEEEESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred             ecccceeEEECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence            999999999998765   6678889999999999999777889999999999999974

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=100.00  E-value=2.2e-37  Score=278.68  Aligned_cols=262  Identities=20%  Similarity=0.361  Sum_probs=223.6

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      .++.+.+|..........+...+|.+.|+||+|+  |++|++|+.||+|+|||+ +++.+..+.+|...+.++++     
T Consensus       123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~-----  197 (420)
T 4gga_A          123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW-----  197 (420)
T ss_dssp             ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-----
T ss_pred             eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee-----
Confidence            4678889976544333344556789999999998  679999999999999999 56777889999999999998     


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ++.++++|+.|+.+++||...   ....+..+.+|...+..+.++|+++++++++.|+.+++|+..+++..         
T Consensus       198 ~~~~l~sgs~d~~i~~~d~~~---~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~---------  265 (420)
T 4gga_A          198 NSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG---------  265 (420)
T ss_dssp             ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC---------
T ss_pred             CCCEEEEEeCCCceeEeeecc---cceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecccccc---------
Confidence            456899999999999999653   23456778899999999999999999999999999999999875431         


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEE--ECCCeEEEEecccCceeEEEECCeeeEEEEEC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITS--SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS  324 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~--~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~  324 (391)
                                      ...+.....|...|.+++|+|.+  .++++  +.|++|++||+.++++...+..+..+.++.|+
T Consensus       266 ----------------~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~  329 (420)
T 4gga_A          266 ----------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWS  329 (420)
T ss_dssp             ----------------SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEE
T ss_pred             ----------------ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeec
Confidence                            23456677899999999999643  35543  57999999999999999999999999999999


Q ss_pred             CCCCEEEEee--CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         325 PLSKLVITAS--ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       325 p~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+++.+++++  .|+.|+|||+.+.+   ++..+.+|.+.|++++|+| ++.+|+||+.||+|+|||+
T Consensus       330 ~~~~~lv~~sg~~d~~I~iwd~~~~~---~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv  393 (420)
T 4gga_A          330 PHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRC  393 (420)
T ss_dssp             TTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECC
T ss_pred             CCCCeEEEEEecCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEEC
Confidence            9999888765  78999999998876   7889999999999999999 5668999999999999997

>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R

Probab=100.00  E-value=1.5e-37  Score=272.08  Aligned_cols=241  Identities=21%  Similarity=0.345  Sum_probs=195.3

Q ss_pred             cccCCCCcEEEEEe--------cCCEEEEEECCCeEEEEcCCC--------ceEEeccCCCCCeeEEEEEecCCCCeEEE
Q psy2107         111 DCILHDDWVSAIDF--------HNDWILTGCYDHSVHIWTRRG--------EHKLNIPGHGGPVKGVAWLYNDGKDAAFI  174 (391)
Q Consensus       111 ~~~~h~~~V~~~~~--------~~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~  174 (391)
                      .+.+|.++|++++|        ++.+|++|+.|++|++||+..        .....+.+|...|.+++|   ++++.+++
T Consensus        16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~---~~~~~~l~   92 (343)
T 2xzm_R           16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL---SQENCFAI   92 (343)
T ss_dssp             EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE---CSSTTEEE
T ss_pred             eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE---CCCCCEEE
Confidence            35689999999999        356999999999999999842        234577899999999999   77889999


Q ss_pred             EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccc
Q psy2107         175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~  254 (391)
                      +|+.|++|++||++    ....+..+.+|...|.+++|+|++++|++|+.|+.|++||+.....                
T Consensus        93 s~s~D~~v~lwd~~----~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~----------------  152 (343)
T 2xzm_R           93 SSSWDKTLRLWDLR----TGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK----------------  152 (343)
T ss_dssp             EEETTSEEEEEETT----SSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE----------------
T ss_pred             EEcCCCcEEEEECC----CCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce----------------
Confidence            99999999999965    3356788899999999999999999999999999999999863111                


Q ss_pred             cccccccCCCCCceeeecCccCcccEEEeccC-----------CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEE
Q psy2107         255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAV-----------DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVH  322 (391)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~  322 (391)
                                 ........|...|.+++|+|.           ..+++++.|+.|++||. ..+....+..|. .|.+++
T Consensus       153 -----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~  220 (343)
T 2xzm_R          153 -----------FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLS  220 (343)
T ss_dssp             -----------EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEE
T ss_pred             -----------eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEE
Confidence                       011112368889999999975           36999999999999994 456666666654 899999


Q ss_pred             ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         323 YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+|+|++|++|+.||.|++||+.....  ....+ .+...|++++|+| ++.+++ ++.|+.|++||+.
T Consensus       221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~--~~~~~-~~~~~v~~v~~sp-~~~~la-~~~d~~v~iw~~~  284 (343)
T 2xzm_R          221 ISPNGKYIATGGKDKKLLIWDILNLTY--PQREF-DAGSTINQIAFNP-KLQWVA-VGTDQGVKIFNLM  284 (343)
T ss_dssp             ECTTSSEEEEEETTCEEEEEESSCCSS--CSEEE-ECSSCEEEEEECS-SSCEEE-EEESSCEEEEESS
T ss_pred             ECCCCCEEEEEcCCCeEEEEECCCCcc--cceee-cCCCcEEEEEECC-CCCEEE-EECCCCEEEEEeC
Confidence            999999999999999999999854332  22222 3456799999999 556555 5568899999973

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=100.00  E-value=1.7e-37  Score=271.49  Aligned_cols=272  Identities=19%  Similarity=0.269  Sum_probs=213.0

Q ss_pred             cccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         111 DCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      ++.||.+.|++|+|+   +++|+||+.||+|+|||+..      .....+.+|...|.+++|   ++++.+|++|+.|+.
T Consensus        33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~---s~dg~~l~s~~~d~~  109 (340)
T 4aow_A           33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVI---SSDGQFALSGSWDGT  109 (340)
T ss_dssp             EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred             EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEE---CCCCCEEEEEccccc
Confidence            356899999999998   46999999999999999842      235577899999999999   778999999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCC-------------CCCCC
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPS-------------ENGDE  248 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-------------~~~~~  248 (391)
                      |++|+..    ..........+...+..+.+++++++|++|+.|+.+++||...........             .....
T Consensus       110 i~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  185 (340)
T 4aow_A          110 LRLWDLT----TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN  185 (340)
T ss_dssp             EEEEETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred             ceEEeec----ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence            9999954    334556667788899999999999999999999999999987543211100             00000


Q ss_pred             ---CccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEEC
Q psy2107         249 ---GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS  324 (391)
Q Consensus       249 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~  324 (391)
                         ...........++.........+.+|...|.+++|+|++ .|++|+.|+.|++||+++.+.+..+..+..+.+++|+
T Consensus       186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~  265 (340)
T 4aow_A          186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFS  265 (340)
T ss_dssp             CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEEC
T ss_pred             cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecC
Confidence               001111222344555667778888999999999999655 5899999999999999999999999999999999999


Q ss_pred             CCCCEEEEeeCCCcEEEEcCCCCCc------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         325 PLSKLVITASADKQIRLYDPKVKEG------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       325 p~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++.+++ ++.|+.|++||++....      ........+|...|++++|+| ++.+|++|+.||.|+|||++
T Consensus       266 ~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~Dg~v~iW~~~  336 (340)
T 4aow_A          266 PNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSA-DGQTLFAGYTDNLVRVWQVT  336 (340)
T ss_dssp             SSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECT-TSSEEEEEETTSCEEEEEEE
T ss_pred             CCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCC
Confidence            9876555 55699999999876431      111223457889999999999 66789999999999999974

>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A

Probab=100.00  E-value=2.3e-37  Score=291.24  Aligned_cols=273  Identities=17%  Similarity=0.212  Sum_probs=223.9

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECC----CeEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYD----HSVH  139 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d----g~i~  139 (391)
                      ....|.++|+++++          .+.++.+++|............+.+|.++|.+++|+  ++.|++++.+    +.|+
T Consensus        63 ~~~~~spdg~~las----------g~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~  132 (611)
T 1nr0_A           63 TVAKTSPSGYYCAS----------GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVF  132 (611)
T ss_dssp             EEEEECTTSSEEEE----------EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEE
T ss_pred             EEEEECCCCcEEEE----------EeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEE
Confidence            45689999998876          346889999987433322233456799999999998  6688888865    5899


Q ss_pred             EEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107         140 IWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ  218 (391)
Q Consensus       140 iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  218 (391)
                      +||. +.....+.+|...|.+++|   +|++. .|++|+.|++|++||..    ..++...+.+|...|.+++|+|++++
T Consensus       133 ~wd~-~~~~~~l~gh~~~v~~v~f---~p~~~~~l~s~s~D~~v~lwd~~----~~~~~~~l~~H~~~V~~v~fspdg~~  204 (611)
T 1nr0_A          133 LFDT-GTSNGNLTGQARAMNSVDF---KPSRPFRIISGSDDNTVAIFEGP----PFKFKSTFGEHTKFVHSVRYNPDGSL  204 (611)
T ss_dssp             ETTT-CCBCBCCCCCSSCEEEEEE---CSSSSCEEEEEETTSCEEEEETT----TBEEEEEECCCSSCEEEEEECTTSSE
T ss_pred             EeeC-CCCcceecCCCCCceEEEE---CCCCCeEEEEEeCCCeEEEEECC----CCeEeeeeccccCceEEEEECCCCCE
Confidence            9995 4455678899999999999   55665 69999999999999943    45677889999999999999999999


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-------cCccCcccEEEeccCC-eEE
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-------KGHKEAISAVQWTAVD-EII  290 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~-~l~  290 (391)
                      |++|+.|+.|++||+.+++.                             ...+       .+|...|.+++|+|++ .|+
T Consensus       205 las~s~D~~i~lwd~~~g~~-----------------------------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~  255 (611)
T 1nr0_A          205 FASTGGDGTIVLYNGVDGTK-----------------------------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA  255 (611)
T ss_dssp             EEEEETTSCEEEEETTTCCE-----------------------------EEECBCTTSSSCSSSSCEEEEEECTTSSEEE
T ss_pred             EEEEECCCcEEEEECCCCcE-----------------------------eeeeccccccccccCCCEEEEEECCCCCEEE
Confidence            99999999999999876432                             2222       2799999999999765 599


Q ss_pred             EEECCCeEEEEecccCceeEEEE-------------------------------------------CC-eeeEEEEECCC
Q psy2107         291 TSSWDHTLKIWDAELGGMKSEIV-------------------------------------------GN-KSFFDVHYSPL  326 (391)
Q Consensus       291 s~~~dg~i~iwd~~~~~~~~~~~-------------------------------------------~~-~~i~~~~~~p~  326 (391)
                      +++.|++|++||+.+++.+.++.                                           +| ..|.+++|+|+
T Consensus       256 s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spd  335 (611)
T 1nr0_A          256 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSAD  335 (611)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred             EEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCC
Confidence            99999999999999877655442                                           23 37899999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |++|++|+.|+.|++||+.++.   ....+ .+|...|.+++|++ ++ .+++++.|+.+++|++
T Consensus       336 g~~l~s~s~D~~v~~Wd~~~~~---~~~~~~~~h~~~v~~~~~s~-~~-~l~s~s~d~~v~~w~~  395 (611)
T 1nr0_A          336 GKTLFSADAEGHINSWDISTGI---SNRVFPDVHATMITGIKTTS-KG-DLFTVSWDDHLKVVPA  395 (611)
T ss_dssp             SSEEEEEETTSCEEEEETTTCC---EEECSSCSCSSCEEEEEECT-TS-CEEEEETTTEEEEECS
T ss_pred             CCEEEEEeCCCcEEEEECCCCc---eeeecccCCcceEEEEEECC-CC-cEEEEEcCCceEEeec
Confidence            9999999999999999998765   44343 57999999999998 55 4889999999999986

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=1.7e-37  Score=274.85  Aligned_cols=301  Identities=17%  Similarity=0.194  Sum_probs=233.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++++++++          ...++.+.+|............+.+|...|++++|+  +++|++++.||.|++||+
T Consensus        12 ~~~~~s~~~~~l~~----------~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~   81 (372)
T 1k8k_C           12 SCHAWNKDRTQIAI----------CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL   81 (372)
T ss_dssp             CEEEECTTSSEEEE----------ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             EEEEECCCCCEEEE----------EeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEEC
Confidence            45688899987765          235788999987654311344556799999999998  779999999999999999


Q ss_pred             CCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107         144 RGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA  220 (391)
Q Consensus       144 ~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~  220 (391)
                      ....   ...+..|...|.+++|   ++++.+|++++.||.|++||++.............+|...|.+++|+|++++|+
T Consensus        82 ~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~  158 (372)
T 1k8k_C           82 KGRTWKPTLVILRINRAARCVRW---APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA  158 (372)
T ss_dssp             ETTEEEEEEECCCCSSCEEEEEE---CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred             CCCeeeeeEEeecCCCceeEEEE---CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEE
Confidence            5443   3345789999999999   778899999999999999998754432223333467899999999999999999


Q ss_pred             EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEE
Q psy2107         221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLK  299 (391)
Q Consensus       221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~  299 (391)
                      +|+.||.|++||++...........           ...........+..+..|...|.+++|++++ .+++++.|+.|+
T Consensus       159 ~~~~dg~i~~~d~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~  227 (372)
T 1k8k_C          159 AGSCDFKCRIFSAYIKEVEERPAPT-----------PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC  227 (372)
T ss_dssp             EEETTSCEEEEECCCTTTSCCCCCB-----------TTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred             EEcCCCCEEEEEccccccccccccc-----------ccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEE
Confidence            9999999999998653321110000           0000012345667777899999999999655 699999999999


Q ss_pred             EEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCC--CCc---------------------------
Q psy2107         300 IWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKV--KEG---------------------------  349 (391)
Q Consensus       300 iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~--~~~---------------------------  349 (391)
                      +||+++++.+..+..+. ++.+++|+|++.++++| .|+.|++|+++.  +..                           
T Consensus       228 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (372)
T 1k8k_C          228 LADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD  306 (372)
T ss_dssp             EEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred             EEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcc
Confidence            99999999999998776 89999999999999888 899999999876  210                           


Q ss_pred             --ceEE------EEe-ccccCcEEEEEECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107         350 --AIVK------STF-SSHKEWVQSVRWSPIDP---QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       350 --~~~~------~~~-~~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~iwdlr  391 (391)
                        ....      ..+ .+|...|++++|++.++   .+|+||+.||.|++||++
T Consensus       307 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~  360 (372)
T 1k8k_C          307 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR  360 (372)
T ss_dssp             CCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred             cccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence              0000      222 48999999999886566   899999999999999973

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-38  Score=284.02  Aligned_cols=291  Identities=20%  Similarity=0.366  Sum_probs=232.4

Q ss_pred             ceeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEc
Q psy2107          66 IQFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWT  142 (391)
Q Consensus        66 ~~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd  142 (391)
                      ....|.++++ ++++.-..--.....+.++.+.+|.........+.....|...|++++|+  +++|++|+.||.|++||
T Consensus        16 ~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~   95 (416)
T 2pm9_A           16 ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYS   95 (416)
T ss_dssp             CBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEEC
T ss_pred             ceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEee
Confidence            3467888885 66542100000001156788999988765544455566799999999998  66999999999999999


Q ss_pred             CCC-----ceEEeccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC-----ceeEEEEEecCCCCeEEEE
Q psy2107         143 RRG-----EHKLNIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN-----SIECIHVCRGHERGLETVT  211 (391)
Q Consensus       143 ~~~-----~~~~~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~  211 (391)
                      +..     .....+.+|...|.+++|   +++ +.+|++++.||.|++||+.....     .......+..|...|.+++
T Consensus        96 ~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  172 (416)
T 2pm9_A           96 TNEANNAINSMARFSNHSSSVKTVKF---NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA  172 (416)
T ss_dssp             CSSTTSCCCEEEECCCSSSCCCEEEE---CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred             cccccccccchhhccCCccceEEEEE---cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence            954     477788899999999999   555 78999999999999999764331     1112233467899999999


Q ss_pred             EcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc------cCcccEEEec
Q psy2107         212 VSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH------KEAISAVQWT  284 (391)
Q Consensus       212 ~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~  284 (391)
                      |+|+ +.+|++++.||.|++||+++++                             .+..+..|      ...|.+++|+
T Consensus       173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~-----------------------------~~~~~~~~~~~~~~~~~v~~~~~~  223 (416)
T 2pm9_A          173 WNQSLAHVFASAGSSNFASIWDLKAKK-----------------------------EVIHLSYTSPNSGIKQQLSVVEWH  223 (416)
T ss_dssp             ECSSCTTEEEEESSSSCEEEEETTTTE-----------------------------EEEEECCCCCSSCCCCCEEEEEEC
T ss_pred             eCCCCCcEEEEEcCCCCEEEEECCCCC-----------------------------cceEEeccccccccCCceEEEEEC
Confidence            9998 7899999999999999997633                             34444444      7889999999


Q ss_pred             cCC--eEEEEECCC---eEEEEecccC-ceeEEEE-C-CeeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107         285 AVD--EIITSSWDH---TLKIWDAELG-GMKSEIV-G-NKSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       285 ~~~--~l~s~~~dg---~i~iwd~~~~-~~~~~~~-~-~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~  355 (391)
                      |++  .+++++.|+   .|++||++++ .....+. . ...+.+++|+| ++++|++++.|+.|++||+++.+   .+..
T Consensus       224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~---~~~~  300 (416)
T 2pm9_A          224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE---QLSQ  300 (416)
T ss_dssp             SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC---EEEE
T ss_pred             CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc---ccee
Confidence            764  689999998   9999999986 5666666 3 45899999999 89999999999999999998776   7778


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|...|++++|+|+++.+|++++.||.|++||++
T Consensus       301 ~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~  336 (416)
T 2pm9_A          301 FPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQ  336 (416)
T ss_dssp             EECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESC
T ss_pred             ecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEcc
Confidence            889999999999999665899999999999999984

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1e-36  Score=270.40  Aligned_cols=251  Identities=19%  Similarity=0.308  Sum_probs=208.0

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      ..+.+|.+.|++++|+  +++|++|+.||.|+|||+.   ......+.+|...|++++|+|. .++.+|++|+.||.|++
T Consensus         5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~l~s~~~dg~v~i   83 (379)
T 3jrp_A            5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLI   83 (379)
T ss_dssp             CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCG-GGCSEEEEEETTSCEEE
T ss_pred             EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCC-CCCCEEEEeccCCEEEE
Confidence            3456799999999998  6799999999999999984   3445578899999999999431 23789999999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ||+.  ......+..+..|...|.+++|+|+  +.+|++++.||.|++||++....                        
T Consensus        84 wd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~------------------------  137 (379)
T 3jrp_A           84 WKEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT------------------------  137 (379)
T ss_dssp             EEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC------------------------
T ss_pred             EEcC--CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc------------------------
Confidence            9976  3444577888889999999999999  99999999999999999976432                        


Q ss_pred             CCCCceeeecCccCcccEEEecc--------------CCeEEEEECCCeEEEEecccCce----eEEEECC-eeeEEEEE
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTA--------------VDEIITSSWDHTLKIWDAELGGM----KSEIVGN-KSFFDVHY  323 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~--------------~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~-~~i~~~~~  323 (391)
                         .....+..|...|.+++|+|              +..+++++.|+.|++||++++..    ...+..| ..|.+++|
T Consensus       138 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~  214 (379)
T 3jrp_A          138 ---TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW  214 (379)
T ss_dssp             ---CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred             ---eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence               24456778999999999997              45699999999999999987653    3445444 48999999


Q ss_pred             CCC---CCEEEEeeCCCcEEEEcCCCCCcceEEEEe--ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         324 SPL---SKLVITASADKQIRLYDPKVKEGAIVKSTF--SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       324 ~p~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+   +++|++++.||.|++||++...........  ..|...|++++|+| ++.+|++++.||.|++||++
T Consensus       215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~  286 (379)
T 3jrp_A          215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN  286 (379)
T ss_dssp             CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEE
T ss_pred             CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCC
Confidence            999   899999999999999999876433233333  34889999999999 55679999999999999973

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=1.7e-37  Score=296.79  Aligned_cols=259  Identities=21%  Similarity=0.368  Sum_probs=214.0

Q ss_pred             CccceEEEEEEeccCCCC---CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEE
Q psy2107          91 SSENVIDVEYLESTPTPS---PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWL  164 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~  164 (391)
                      +.++.+++|.........   ...+.+|...|++++|+  +++|++|+.||+|+|||+ ++.....+.+|...|.+++| 
T Consensus       402 s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~-  480 (694)
T 3dm0_A          402 SRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF-  480 (694)
T ss_dssp             ETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE-
T ss_pred             eCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE-
Confidence            468899999875433221   23456899999999998  679999999999999999 56667788899999999999 


Q ss_pred             ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE----ecCCCCeEEEEEcCCC--CEEEEEeCCCcEEEEECCCCCC
Q psy2107         165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC----RGHERGLETVTVSESR--QQFATGGWDCLLKIWSADISKE  238 (391)
Q Consensus       165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~~~v~~l~~~~~~--~~l~sg~~dg~i~iwd~~~~~~  238 (391)
                        ++++.+|++|+.|++|++||..  .   .+...+    .+|...|.+++|+|++  ..|++|+.|+.|++||+++   
T Consensus       481 --s~~~~~l~s~s~D~~i~iwd~~--~---~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~---  550 (694)
T 3dm0_A          481 --SLDNRQIVSASRDRTIKLWNTL--G---ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN---  550 (694)
T ss_dssp             --CTTSSCEEEEETTSCEEEECTT--S---CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---
T ss_pred             --eCCCCEEEEEeCCCEEEEEECC--C---CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---
Confidence              7788999999999999999953  2   122222    4688899999999986  6899999999999999976   


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCee
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKS  317 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~  317 (391)
                                                ......+.+|...|.+++|+|++ .|++++.||.|++||+++++.+..+..+..
T Consensus       551 --------------------------~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~  604 (694)
T 3dm0_A          551 --------------------------CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV  604 (694)
T ss_dssp             --------------------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC
T ss_pred             --------------------------CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc
Confidence                                      34567788999999999999655 589999999999999999999888888889


Q ss_pred             eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-------------------cCcEEEEEECCCCCCEEEE
Q psy2107         318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-------------------KEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-------------------~~~v~~~~~~~~~~~~l~s  378 (391)
                      +.+++|+|++.++++++ ++.|++||+++..   ++..+..+                   ...+++++|+| ++.+|+|
T Consensus       605 v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~sp-dg~~l~s  679 (694)
T 3dm0_A          605 IHALCFSPNRYWLCAAT-EHGIKIWDLESKS---IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSA-DGSTLFS  679 (694)
T ss_dssp             EEEEEECSSSSEEEEEE-TTEEEEEETTTTE---EEEEECCCCC----------------CCCCEEEEEECT-TSSEEEE
T ss_pred             EEEEEEcCCCcEEEEEc-CCCEEEEECCCCC---ChhhhccccccccccccccccccCCceeEEeeeEEEcC-CCCEEEE
Confidence            99999999999888776 5669999998755   43333221                   12478999999 6678999


Q ss_pred             eeCCCcEEEEecC
Q psy2107         379 ASFDNSVKLWDLR  391 (391)
Q Consensus       379 ~~~dg~v~iwdlr  391 (391)
                      |+.||+|+|||+.
T Consensus       680 gs~Dg~i~iW~i~  692 (694)
T 3dm0_A          680 GYTDGVIRVWGIG  692 (694)
T ss_dssp             EETTSEEEEEEC-
T ss_pred             EcCCCeEEEEecc
Confidence            9999999999983

>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}

Probab=100.00  E-value=1.5e-36  Score=284.52  Aligned_cols=268  Identities=27%  Similarity=0.448  Sum_probs=227.7

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++++.+.+          .+.++.+.+|...   ......+.+|...|.+++|+  ++.+++++.||.|++||.
T Consensus       266 ~~v~~~~d~~~l~~----------~~~d~~i~~w~~~---~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~  332 (577)
T 2ymu_A          266 NGVAFRPDGQTIAS----------ASDDKTVKLWNRN---GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR  332 (577)
T ss_dssp             EEEEECTTSSEEEE----------EETTSCEEEEETT---SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred             EEEEEcCCCCEEEE----------EeCCCEEEEEeCC---CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence            34577778866654          2356778888632   22234456799999999998  569999999999999999


Q ss_pred             CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      ++..+..+.+|...|.+++|   ++++.++++|+.||.|++|+.     ....+..+.+|...|.+++|+|++++|++++
T Consensus       333 ~~~~~~~~~~~~~~v~~~~~---s~~g~~l~~~~~dg~v~~~~~-----~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~  404 (577)
T 2ymu_A          333 NGQHLQTLTGHSSSVWGVAF---SPDGQTIASASDDKTVKLWNR-----NGQLLQTLTGHSSSVRGVAFSPDGQTIASAS  404 (577)
T ss_dssp             TSCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEET-----TCCEEEEEECCSSCEEEEEECTTSSCEEEEE
T ss_pred             CCCeeEEEeCCCCCEEEEEE---CCCCCEEEEEeCCCEEEEEcC-----CCCEEEEecCCCCCeEEEEECCCCCEEEEEe
Confidence            98888899999999999999   778999999999999999993     2356778889999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEe
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWD  302 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd  302 (391)
                      .|+.|++||..                              .+.+..+.+|...|.+++|+|++ .+++++.|+.|++||
T Consensus       405 ~d~~v~~~~~~------------------------------~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~  454 (577)
T 2ymu_A          405 DDKTVKLWNRN------------------------------GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWN  454 (577)
T ss_dssp             TTSEEEEECTT------------------------------CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred             CCCEEEEEeCC------------------------------CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEE
Confidence            99999999963                              23567788999999999999654 589999999999999


Q ss_pred             cccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         303 AELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       303 ~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      . +++.+..+..+. .+.+++|+|++++|++++.|+.|++||.. ++   +...+.+|...|++++|+| ++++|++++.
T Consensus       455 ~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~---~~~~~~~h~~~v~~l~~s~-dg~~l~s~~~  528 (577)
T 2ymu_A          455 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ---LLQTLTGHSSSVRGVAFSP-DGQTIASASD  528 (577)
T ss_dssp             T-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SC---EEEEEECCSSCEEEEEECT-TSSCEEEEET
T ss_pred             C-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC---EEEEEeCCCCCEEEEEEcC-CCCEEEEEEC
Confidence            6 466677776654 89999999999999999999999999953 33   6778899999999999999 6678999999


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      ||.|++||+
T Consensus       529 dg~v~lwd~  537 (577)
T 2ymu_A          529 DKTVKLWNR  537 (577)
T ss_dssp             TSEEEEECT
T ss_pred             cCEEEEEeC
Confidence            999999995

>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1

Probab=100.00  E-value=1.3e-36  Score=271.00  Aligned_cols=240  Identities=20%  Similarity=0.431  Sum_probs=197.2

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCC------------------CCeeEEEEEecCCCCe
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHG------------------GPVKGVAWLYNDGKDA  171 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~------------------~~v~~l~~~~~~~~~~  171 (391)
                      .+|.+.|+|++|+  |++|++|+ ++.+++|++ ++..+..+..|.                  ..|.+++|   ++++.
T Consensus        61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---s~dg~  136 (393)
T 1erj_A           61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---SPDGK  136 (393)
T ss_dssp             EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE---CTTSS
T ss_pred             cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEE---CCCCC
Confidence            3699999999998  66888876 789999998 555555555443                  24899999   77899


Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      +|++|+.||.|++||+.    ..+.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++              
T Consensus       137 ~l~s~~~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~--------------  198 (393)
T 1erj_A          137 FLATGAEDRLIRIWDIE----NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--------------  198 (393)
T ss_dssp             EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------
T ss_pred             EEEEEcCCCeEEEEECC----CCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCe--------------
Confidence            99999999999999964    346778889999999999999999999999999999999997633              


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEE-------C-CeeeEEE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIV-------G-NKSFFDV  321 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~-~~~i~~~  321 (391)
                                     ....+. +...+.+++|+| + ..+++++.|+.|++||++++..+..+.       . ...|.++
T Consensus       199 ---------------~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v  262 (393)
T 1erj_A          199 ---------------CSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV  262 (393)
T ss_dssp             ---------------EEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred             ---------------eEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence                           233333 566789999996 4 469999999999999999998877762       2 3489999


Q ss_pred             EECCCCCEEEEeeCCCcEEEEcCCCCCc---------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         322 HYSPLSKLVITASADKQIRLYDPKVKEG---------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+|++++|++|+.|+.|++||++....         ..+...+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus       263 ~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~  340 (393)
T 1erj_A          263 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKK  340 (393)
T ss_dssp             EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETT
T ss_pred             EECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECC
Confidence            9999999999999999999999875321         124557788999999999999 66789999999999999974

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=100.00  E-value=3.8e-36  Score=260.34  Aligned_cols=275  Identities=20%  Similarity=0.342  Sum_probs=227.2

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-C
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-R  144 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~  144 (391)
                      .+|+.++ +|+.           ..++.+++|..........+...+|...|++++|+  +++|++|+.||+|++||+ +
T Consensus        31 l~WS~~~-~lAv-----------g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~   98 (318)
T 4ggc_A           31 VDWSSGN-VLAV-----------ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQ   98 (318)
T ss_dssp             EEECTTS-EEEE-----------EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred             EEECCCC-EEEE-----------EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCC
Confidence            5677666 5554           24778999986544333344556799999999998  679999999999999999 5


Q ss_pred             CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         145 GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      ++.+..+.+|...+.++.+     ++..+++|+.++.+++|+...   ....+..+.+|...+.++++++++++|++++.
T Consensus        99 ~~~~~~~~~h~~~~~~~~~-----~~~~l~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~  170 (318)
T 4ggc_A           99 QKRLRNMTSHSARVGSLSW-----NSYILSSGSRSGHIHHHDVRV---AEHHVATLSGHSQEVCGLRWAPDGRHLASGGN  170 (318)
T ss_dssp             TEEEEEEECCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTS---SSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             ceeEEEecCccceEEEeec-----CCCEEEEEecCCceEeeecCC---CceeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence            6677788899999988777     456899999999999998542   33566778899999999999999999999999


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC--e--EEEEECCCeEEE
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--E--IITSSWDHTLKI  300 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~--l~s~~~dg~i~i  300 (391)
                      ||.|++||+++++..                         .........+...|.++.+.+.+  .  +++++.++.|++
T Consensus       171 d~~i~iwd~~~~~~~-------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l  225 (318)
T 4ggc_A          171 DNLVNVWPSAPGEGG-------------------------WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI  225 (318)
T ss_dssp             TSCEEEEESSCBTTB-------------------------SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred             CcceeEEECCCCccc-------------------------ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence            999999999875532                         22445566788899999998543  2  345577899999


Q ss_pred             EecccCceeEEEECCeeeEEEEECCCCCEEEEee--CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107         301 WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS--ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       301 wd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~--~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  378 (391)
                      ||...............+..+.|+|+++.+++++  .|+.|++||+++++   ++..+.+|.+.|++++|+| ++.+|+|
T Consensus       226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~---~~~~l~gH~~~V~~l~~sp-dg~~l~S  301 (318)
T 4ggc_A          226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSP-DGATVAS  301 (318)
T ss_dssp             EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECT-TSSCEEE
T ss_pred             EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEE
Confidence            9999999988888888999999999999887654  79999999998876   7889999999999999999 6668999


Q ss_pred             eeCCCcEEEEecC
Q psy2107         379 ASFDNSVKLWDLR  391 (391)
Q Consensus       379 ~~~dg~v~iwdlr  391 (391)
                      ||.||+|+|||+.
T Consensus       302 ~s~D~~v~iWd~~  314 (318)
T 4ggc_A          302 AAADETLRLWRCF  314 (318)
T ss_dssp             EETTTEEEEECCS
T ss_pred             EecCCeEEEEECC
Confidence            9999999999974

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=100.00  E-value=2.1e-36  Score=264.98  Aligned_cols=263  Identities=18%  Similarity=0.268  Sum_probs=208.3

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      .+.+|.+.|++++|+  +++|++|+.||.|++||+..     .....+.+|...|.+++|+|. .++.+|++|+.||.|+
T Consensus         6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~d~~~l~s~~~dg~v~   84 (351)
T 3f3f_A            6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASP-EYGRIIASASYDKTVK   84 (351)
T ss_dssp             EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCG-GGCSEEEEEETTSCEE
T ss_pred             cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCC-CCCCEEEEEcCCCeEE
Confidence            345799999999998  67999999999999999853     245567899999999999431 1478999999999999


Q ss_pred             EEeecCCCC-----ceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         184 IWEWKVESN-----SIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       184 iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      +||++....     ....+..+..|...|.+++|+|+  +++|++++.||.|++||+++++.........          
T Consensus        85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~----------  154 (351)
T 3f3f_A           85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTS----------  154 (351)
T ss_dssp             EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEE----------
T ss_pred             EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccc----------
Confidence            999864322     22667888899999999999999  9999999999999999998765432110000          


Q ss_pred             cccccCCCCCceeeecCccCcccEEEecc----CCeEEEEECCCeEEEEecccCce--eEEEECC-eeeEEEEECCCC--
Q psy2107         257 KEYSSASSRTPLITLKGHKEAISAVQWTA----VDEIITSSWDHTLKIWDAELGGM--KSEIVGN-KSFFDVHYSPLS--  327 (391)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~-~~i~~~~~~p~~--  327 (391)
                            ...........|...+.+++|+|    ...+++++.++.+.+|+...+..  ...+..+ ..|.+++|+|++  
T Consensus       155 ------~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~  228 (351)
T 3f3f_A          155 ------EMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGR  228 (351)
T ss_dssp             ------EEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSC
T ss_pred             ------cccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCC
Confidence                  00000111235788899999996    45699999999998888887765  4444444 489999999998  


Q ss_pred             --CEEEEeeCCCcEEEEcCCCCC-------------------------------------------cceEEEEeccccCc
Q psy2107         328 --KLVITASADKQIRLYDPKVKE-------------------------------------------GAIVKSTFSSHKEW  362 (391)
Q Consensus       328 --~~l~~g~~dg~i~iwd~~~~~-------------------------------------------~~~~~~~~~~h~~~  362 (391)
                        ++|++|+.||.|++||++...                                           ....+..+.+|...
T Consensus       229 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~  308 (351)
T 3f3f_A          229 WYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGE  308 (351)
T ss_dssp             SSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSC
T ss_pred             cceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEeccccc
Confidence              899999999999999987531                                           11356678889999


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++++|+| ++.+|++++.||.|++||+.
T Consensus       309 v~~~~~s~-~~~~l~s~~~dg~v~iw~~~  336 (351)
T 3f3f_A          309 VWSVSWNL-TGTILSSAGDDGKVRLWKAT  336 (351)
T ss_dssp             EEEEEECS-SSCCEEEEETTSCEEEEEEC
T ss_pred             EEEEEEcC-CCCEEEEecCCCcEEEEecC
Confidence            99999999 56789999999999999974

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=4e-37  Score=271.71  Aligned_cols=290  Identities=15%  Similarity=0.215  Sum_probs=217.4

Q ss_pred             ccceEEEEEEeccCCCCCCc---ccCCCCcEEEEEecC------CEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEE
Q psy2107          92 SENVIDVEYLESTPTPSPLD---CILHDDWVSAIDFHN------DWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGV  161 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~---~~~h~~~V~~~~~~~------~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l  161 (391)
                      .++.+.+|..........+.   ...|...|++++|++      .+|++|+.||.|++||+ +++.+..+.+|...|.++
T Consensus        42 ~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~  121 (366)
T 3k26_A           42 GSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL  121 (366)
T ss_dssp             ETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred             CCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence            34567777765433221111   123778999999973      38999999999999999 567777888999999999


Q ss_pred             EEEecCC-CCeEEEEEeCCCcEEEEeecCCCCceeEEEEE---ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         162 AWLYNDG-KDAAFISVSTDQTAMIWEWKVESNSIECIHVC---RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       162 ~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      +|   ++ ++.+|++|+.||.|++||++    ....+..+   .+|...|.+++|+|++++|++++.||.|++||+++++
T Consensus       122 ~~---~~~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~  194 (366)
T 3k26_A          122 KF---HPRDPNLLLSVSKDHALRLWNIQ----TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKR  194 (366)
T ss_dssp             EE---CSSCTTEEEEEETTSCEEEEETT----TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHH
T ss_pred             EE---CCCCCCEEEEEeCCCeEEEEEee----cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCc
Confidence            99   55 78899999999999999965    33556666   6899999999999999999999999999999998754


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCce---------
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM---------  308 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~---------  308 (391)
                      .......... .........................|...|.+++|+ +..+++++.|+.|++||+.++..         
T Consensus       195 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~  272 (366)
T 3k26_A          195 MMNAIKESYD-YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSE  272 (366)
T ss_dssp             HHHHHHHHHT-CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTC
T ss_pred             cccccceeEE-ecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCC
Confidence            3210000000 000000000000001122334455699999999999 67899999999999999987654         


Q ss_pred             -----eEEEECCe-eeEEEEECCC--CCEEEEeeCCCcEEEEcCCCCCcce-EEEEeccc--cCcEEEEEECCCCCCEEE
Q psy2107         309 -----KSEIVGNK-SFFDVHYSPL--SKLVITASADKQIRLYDPKVKEGAI-VKSTFSSH--KEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       309 -----~~~~~~~~-~i~~~~~~p~--~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~~~~h--~~~v~~~~~~~~~~~~l~  377 (391)
                           +..+..+. .+.+++|+|+  +++|++|+.||.|++||+...+... ....+.+|  ...|++++|+| ++.+|+
T Consensus       273 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~  351 (366)
T 3k26_A          273 SNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR-DSSILI  351 (366)
T ss_dssp             CCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT-TSSEEE
T ss_pred             cchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC-CCCeEE
Confidence                 55665554 7899999999  9999999999999999998765322 44567777  79999999999 677899


Q ss_pred             EeeCCCcEEEEecC
Q psy2107         378 SASFDNSVKLWDLR  391 (391)
Q Consensus       378 s~~~dg~v~iwdlr  391 (391)
                      +++.||.|++||+.
T Consensus       352 s~~~dg~i~iwd~~  365 (366)
T 3k26_A          352 AVCDDASIWRWDRL  365 (366)
T ss_dssp             EEETTSEEEEEEC-
T ss_pred             EEeCCCEEEEEEec
Confidence            99999999999984

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-36  Score=271.24  Aligned_cols=283  Identities=15%  Similarity=0.278  Sum_probs=228.2

Q ss_pred             ceeeEEeCCe-EehhhHHHHHHHcCCCccceEEEEEE----eccCC------C----CC----CcccCCCCcEEEEEec-
Q psy2107          66 IQFDFLIAGE-LLRTSVTSFLESKGISSENVIDVEYL----ESTPT------P----SP----LDCILHDDWVSAIDFH-  125 (391)
Q Consensus        66 ~~~~f~~~~~-~l~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~------~----~~----~~~~~h~~~V~~~~~~-  125 (391)
                      ...+|.++++ ++++          .+.++.+.+|..    .....      .    .+    ....+|.+.|++++|+ 
T Consensus        49 ~~~~~s~~~~~~l~~----------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~  118 (425)
T 1r5m_A           49 VSSTWNPLDESILAY----------GEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH  118 (425)
T ss_dssp             SEEEECSSCTTEEEE----------EETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT
T ss_pred             EEEEECCCCCcEEEE----------ecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC
Confidence            5578899998 7765          235678888887    33220      0    00    1112368899999998 


Q ss_pred             -CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-----------
Q psy2107         126 -NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS-----------  193 (391)
Q Consensus       126 -~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-----------  193 (391)
                       +++|++|+.||.|++||.++.....+..|...|.+++|   ++++.+|++++.||.|++||+......           
T Consensus       119 ~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~  195 (425)
T 1r5m_A          119 DGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKW---NKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS  195 (425)
T ss_dssp             TSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEE---CTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred             CCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEE---CCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence             66999999999999999888888999999999999999   778899999999999999996421100           


Q ss_pred             -----------------------------------------eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         194 -----------------------------------------IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       194 -----------------------------------------~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                                                               ...+..+..|...|.+++|+|++++|++++.||.|++||
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d  275 (425)
T 1r5m_A          196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH  275 (425)
T ss_dssp             ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred             ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence                                                     011234456788899999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI  312 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  312 (391)
                      +++                             ......+..|...|.+++|++++.+++++.|+.|++||+++++.+..+
T Consensus       276 ~~~-----------------------------~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~  326 (425)
T 1r5m_A          276 GGN-----------------------------GNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALS  326 (425)
T ss_dssp             SSS-----------------------------BSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred             CCC-----------------------------CccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEec
Confidence            876                             345667778999999999998779999999999999999999999888


Q ss_pred             ECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-----------------cceEEEEeccccC--cEEEEEECCCC
Q psy2107         313 VGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE-----------------GAIVKSTFSSHKE--WVQSVRWSPID  372 (391)
Q Consensus       313 ~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-----------------~~~~~~~~~~h~~--~v~~~~~~~~~  372 (391)
                      ..+ ..+.+++|+|++++|++++.||.|++||++...                 ...++..+.+|..  .|++++|+| +
T Consensus       327 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~  405 (425)
T 1r5m_A          327 IVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-A  405 (425)
T ss_dssp             ECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECT-T
T ss_pred             ccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccC-C
Confidence            875 489999999999999999999999999986532                 0115677888876  999999999 6


Q ss_pred             CCEEEEeeCCCcEEEEecC
Q psy2107         373 PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|++++.||.|++||++
T Consensus       406 ~~~l~~~~~dg~i~iw~~~  424 (425)
T 1r5m_A          406 GNKISVAYSLQEGSVVAIP  424 (425)
T ss_dssp             SSEEEEEESSSCCEEEECC
T ss_pred             CceEEEEecCceEEEEeec
Confidence            6689999999999999985

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.5e-36  Score=270.17  Aligned_cols=261  Identities=20%  Similarity=0.334  Sum_probs=218.9

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      ..++.+.+|........ ......|...|++++|+  +++|++|+.||.|++||+ ++..+..+.+|...|.+++|    
T Consensus       110 ~~d~~v~lw~~~~~~~~-~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~----  184 (401)
T 4aez_A          110 ALERNVYVWNADSGSVS-ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW----  184 (401)
T ss_dssp             EETTEEEEEETTTCCEE-EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE----
T ss_pred             ECCCeEEEeeCCCCcEe-EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE----
Confidence            35777888876433221 12222389999999998  669999999999999999 56777788899999999999    


Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                       ++.++++|+.||.|++||++..   ...+..+.+|...|.+++|+|++++|++|+.||.|++||+++            
T Consensus       185 -~~~~l~~~~~dg~i~i~d~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~------------  248 (401)
T 4aez_A          185 -NRHVLSSGSRSGAIHHHDVRIA---NHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS------------  248 (401)
T ss_dssp             -ETTEEEEEETTSEEEEEETTSS---SCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC------------
T ss_pred             -CCCEEEEEcCCCCEEEEecccC---cceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC------------
Confidence             3458999999999999996532   245677889999999999999999999999999999999976            


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEE--CCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSS--WDHTLKIWDAELGGMKSEIVGNKSFFDVHY  323 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~  323 (391)
                                       ..+...+..|...|.+++|+|++  .+++++  .|+.|++||+.+++.+..+..+..+.+++|
T Consensus       249 -----------------~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~  311 (401)
T 4aez_A          249 -----------------SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGSQVTSLIW  311 (401)
T ss_dssp             -----------------SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSSCEEEEEE
T ss_pred             -----------------CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEEE
Confidence                             34567788899999999999743  355554  799999999999999999998889999999


Q ss_pred             CCCCCEEEE--eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         324 SPLSKLVIT--ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       324 ~p~~~~l~~--g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+++++++  |+.||.|++||+.... ......+.+|...|.+++|+| ++.+|++++.||.|++||++
T Consensus       312 s~~~~~l~~~~g~~dg~i~v~~~~~~~-~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~~~  379 (401)
T 4aez_A          312 SPHSKEIMSTHGFPDNNLSIWSYSSSG-LTKQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWRVY  379 (401)
T ss_dssp             CSSSSEEEEEECTTTCEEEEEEEETTE-EEEEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEECC
T ss_pred             CCCCCeEEEEeecCCCcEEEEecCCcc-ceeEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECC
Confidence            999999999  5589999999987643 223445778999999999999 66789999999999999974

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=6.7e-36  Score=260.81  Aligned_cols=240  Identities=15%  Similarity=0.245  Sum_probs=207.9

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc----eEEe--ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE----HKLN--IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~----~~~~--~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      ..+|.+.|++++|+  ++++++++ ||.|++||+...    ....  ...|...|.+++|   ++++.++++++.||.|+
T Consensus        47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~  122 (337)
T 1gxr_A           47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL---LPDGCTLIVGGEASTLS  122 (337)
T ss_dssp             EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE---CTTSSEEEEEESSSEEE
T ss_pred             eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEE---cCCCCEEEEEcCCCcEE
Confidence            34699999999998  66888888 999999998432    2222  2379999999999   77889999999999999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +||+.  .........+..|...|.+++|+|++++|++++.||.|++||+++                            
T Consensus       123 ~~d~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~----------------------------  172 (337)
T 1gxr_A          123 IWDLA--APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----------------------------  172 (337)
T ss_dssp             EEECC--CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----------------------------
T ss_pred             EEECC--CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC----------------------------
Confidence            99965  334446677888999999999999999999999999999999976                            


Q ss_pred             CCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                       .+....+..|...|.+++|+|++ .+++++.|+.|++||+++++.+..+.....+.+++|+|+++++++++.++.|++|
T Consensus       173 -~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~  251 (337)
T 1gxr_A          173 -QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             -TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             -CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEE
Confidence             33566778899999999999655 6999999999999999999999999888899999999999999999999999999


Q ss_pred             cCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         343 DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       343 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++..+   . ..+..|...|.+++|+| ++.+|++++.||.|++||++
T Consensus       252 ~~~~~~---~-~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~  295 (337)
T 1gxr_A          252 HVNKPD---K-YQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             ETTSSC---E-EEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             ECCCCC---e-EEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECC
Confidence            998765   3 35678999999999999 66789999999999999974

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=3.7e-36  Score=268.75  Aligned_cols=253  Identities=16%  Similarity=0.200  Sum_probs=210.1

Q ss_pred             cccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCc-------eEEeccCCCCCeeEEEEEec-CCCC---eEEEEEeCC
Q psy2107         111 DCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE-------HKLNIPGHGGPVKGVAWLYN-DGKD---AAFISVSTD  179 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~-------~~~~~~~~~~~v~~l~~~~~-~~~~---~~l~s~~~d  179 (391)
                      .+.+|.+.|++++|++++|++|+.||.|++||+...       ....+.+|...|.+++|+|. ..++   .+|++++.|
T Consensus        11 ~~~~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d   90 (397)
T 1sq9_A           11 AGKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFS   90 (397)
T ss_dssp             ESSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETT
T ss_pred             hhhhhhcCeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCC
Confidence            345799999999999999999999999999999543       47788899999999999652 1127   899999999


Q ss_pred             CcEEEEeecCCCCce-eEEEEEecC-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEECCC------CCCCCCC
Q psy2107         180 QTAMIWEWKVESNSI-ECIHVCRGH-----ERGLETVTVS----ESRQQ-FATGGWDCLLKIWSADI------SKERGDP  242 (391)
Q Consensus       180 g~v~iwd~~~~~~~~-~~~~~~~~~-----~~~v~~l~~~----~~~~~-l~sg~~dg~i~iwd~~~------~~~~~~~  242 (391)
                      |.|++|++....... .....+..|     ...|.+++|+    |++++ |++|+.||.|++||+++      ++...  
T Consensus        91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--  168 (397)
T 1sq9_A           91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--  168 (397)
T ss_dssp             SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--
T ss_pred             CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee--
Confidence            999999986433211 125677778     5899999999    99999 99999999999999976      33211  


Q ss_pred             CCCCCCCccccccccccccCCCCCceeee-------cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITL-------KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-  314 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-  314 (391)
                                            ..+...+       ..|...|.+++|++++.+++++.|+.|++||+++++.+..+.. 
T Consensus       169 ----------------------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~  226 (397)
T 1sq9_A          169 ----------------------WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQ  226 (397)
T ss_dssp             ----------------------CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred             ----------------------ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEecc
Confidence                                  1122234       4588999999999766888899999999999999999999987 


Q ss_pred             ------CeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEECCCC
Q psy2107         315 ------NKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRWSPID  372 (391)
Q Consensus       315 ------~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~  372 (391)
                            ...+.+++|+|++++|++++.|   +.|++||++..+   .+..+.+             |...|.+++|+| +
T Consensus       227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~  302 (397)
T 1sq9_A          227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-S  302 (397)
T ss_dssp             C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBSBSSCEEEEEECS-S
T ss_pred             ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc---ccceeccCcccccccccccccCCcEEEEEECC-C
Confidence                  5689999999999999999999   999999998766   6777887             999999999999 6


Q ss_pred             CCEEEEeeCCCcEEEEecC
Q psy2107         373 PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|++++.||.|++||++
T Consensus       303 ~~~l~~~~~dg~i~iwd~~  321 (397)
T 1sq9_A          303 GETLCSAGWDGKLRFWDVK  321 (397)
T ss_dssp             SSEEEEEETTSEEEEEETT
T ss_pred             CCEEEEEeCCCeEEEEEcC
Confidence            6789999999999999984

>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A

Probab=100.00  E-value=1.7e-35  Score=258.21  Aligned_cols=273  Identities=13%  Similarity=0.217  Sum_probs=226.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCc---ccCCCCcEEEEEec--CCEEEEEECCCeEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLD---CILHDDWVSAIDFH--NDWILTGCYDHSVHI  140 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~h~~~V~~~~~~--~~~l~t~~~dg~i~i  140 (391)
                      ....|.++++++.+          .. ++.+.+|............   ..+|...|++++|+  ++++++++.||.|++
T Consensus        55 ~~~~~~~~~~~l~~----------~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~  123 (337)
T 1gxr_A           55 CAVTISNPTRHVYT----------GG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI  123 (337)
T ss_dssp             CEEEECSSSSEEEE----------EC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred             EEEEEecCCcEEEE----------cC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence            45688899988775          23 7889999876543322222   22699999999998  669999999999999


Q ss_pred             EcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         141 WTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       141 wd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      ||+...   ....+..|...|.+++|   ++++.++++++.||.|++||++    ....+..+..|...|.+++|+|+++
T Consensus       124 ~d~~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~l~~~~~dg~v~~~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~  196 (337)
T 1gxr_A          124 WDLAAPTPRIKAELTSSAPACYALAI---SPDSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISNDGT  196 (337)
T ss_dssp             EECCCC--EEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             EECCCCCcceeeecccCCCceEEEEE---CCCCCEEEEEeCCCcEEEEeCC----CCceeeeeecccCceEEEEECCCCC
Confidence            999543   45567789999999999   7788999999999999999965    3467778888999999999999999


Q ss_pred             EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC
Q psy2107         218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH  296 (391)
Q Consensus       218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg  296 (391)
                      +|++++.||.|++||+++++                             .+..+ .+...+.+++|+|++ .+++++.|+
T Consensus       197 ~l~~~~~dg~i~~~d~~~~~-----------------------------~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~  246 (337)
T 1gxr_A          197 KLWTGGLDNTVRSWDLREGR-----------------------------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             EEEEEETTSEEEEEETTTTE-----------------------------EEEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             EEEEEecCCcEEEEECCCCc-----------------------------eEeee-cCCCceEEEEECCCCCEEEEEcCCC
Confidence            99999999999999997633                             33333 467889999999655 588899999


Q ss_pred             eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      .|++||+++++......+...+.+++|+|++++|++++.||.|++||+..++   .. ....|...|++++|+| ++.+|
T Consensus       247 ~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~---~~-~~~~~~~~v~~~~~s~-~~~~l  321 (337)
T 1gxr_A          247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---SI-FQSKESSSVLSCDISV-DDKYI  321 (337)
T ss_dssp             CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EE-EEEECSSCEEEEEECT-TSCEE
T ss_pred             cEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe---EE-EEecCCCcEEEEEECC-CCCEE
Confidence            9999999988876554555689999999999999999999999999998765   33 3345888999999999 66789


Q ss_pred             EEeeCCCcEEEEecC
Q psy2107         377 VSASFDNSVKLWDLR  391 (391)
Q Consensus       377 ~s~~~dg~v~iwdlr  391 (391)
                      ++++.||.|++||+.
T Consensus       322 ~~~~~dg~i~iw~~~  336 (337)
T 1gxr_A          322 VTGSGDKKATVYEVI  336 (337)
T ss_dssp             EEEETTSCEEEEEEE
T ss_pred             EEecCCCeEEEEEEe
Confidence            999999999999973

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.8e-36  Score=269.48  Aligned_cols=275  Identities=10%  Similarity=0.137  Sum_probs=221.3

Q ss_pred             ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC---CEEEEEECCCeEEEE
Q psy2107          66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN---DWILTGCYDHSVHIW  141 (391)
Q Consensus        66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iw  141 (391)
                      ....|.+++ +++++          .+.++.+.+|..............+|...|.+++|++   ++|++++.||.|++|
T Consensus        77 ~~~~~~~~~~~~l~s----------~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw  146 (383)
T 3ei3_B           77 TSLEWHPTHPTTVAV----------GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR  146 (383)
T ss_dssp             EEEEECSSCTTEEEE----------EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred             EEEEECCCCCCEEEE----------EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence            446788887 66665          2457889999876554443444457999999999985   599999999999999


Q ss_pred             cCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-
Q psy2107         142 TRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-  217 (391)
Q Consensus       142 d~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-  217 (391)
                      |+.+.....+..+   ...|.+++|   ++++.+|++|+.||.|++||++     ...+..+.+|...|.+++|+|+++ 
T Consensus       147 d~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~h~~~v~~~~~~~~~~~  218 (383)
T 3ei3_B          147 DFSGSVIQVFAKTDSWDYWYCCVDV---SVSRQMLATGDSTGRLLLLGLD-----GHEIFKEKLHKAKVTHAEFNPRCDW  218 (383)
T ss_dssp             ETTSCEEEEEECCCCSSCCEEEEEE---ETTTTEEEEEETTSEEEEEETT-----SCEEEEEECSSSCEEEEEECSSCTT
T ss_pred             ECCCCceEEEeccCCCCCCeEEEEE---CCCCCEEEEECCCCCEEEEECC-----CCEEEEeccCCCcEEEEEECCCCCC
Confidence            9987777666544   488999999   5678899999999999999952     346778889999999999999998 


Q ss_pred             EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CC-eEEEEECC
Q psy2107         218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VD-EIITSSWD  295 (391)
Q Consensus       218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~-~l~s~~~d  295 (391)
                      +|++|+.|+.|++||+++.+..                         ...+..+ +|...|.+++|+| ++ .|++++.|
T Consensus       219 ~l~s~~~d~~i~iwd~~~~~~~-------------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d  272 (383)
T 3ei3_B          219 LMATSSVDATVKLWDLRNIKDK-------------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQR  272 (383)
T ss_dssp             EEEEEETTSEEEEEEGGGCCST-------------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESS
T ss_pred             EEEEEeCCCEEEEEeCCCCCcc-------------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCC
Confidence            9999999999999999864321                         1233444 6999999999998 65 58999999


Q ss_pred             CeEEEEecccCceeEEEECC------------------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         296 HTLKIWDAELGGMKSEIVGN------------------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~------------------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      +.|++||+++++....+..+                  ..+..++|+|++++  +|+.|+.|++||+.+++   .+..+.
T Consensus       273 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~---~~~~l~  347 (383)
T 3ei3_B          273 NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGG---LVHQLR  347 (383)
T ss_dssp             SEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCC---EEEEEC
T ss_pred             CcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCc---eeeeec
Confidence            99999999998877666532                  23455777777777  77899999999998876   666776


Q ss_pred             c--ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         358 S--HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       358 ~--h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +  |...+..++|+| ++.+|++|+ ||.|+|||++
T Consensus       348 ~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~~  381 (383)
T 3ei3_B          348 DPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNRE  381 (383)
T ss_dssp             BTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEECC
T ss_pred             CCCCCceEEEEEEec-CccEEEEec-CCcEEEEecC
Confidence            6  567788889999 667899997 9999999984

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.5e-36  Score=263.42  Aligned_cols=270  Identities=17%  Similarity=0.233  Sum_probs=223.1

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|++++|+  +++|++|+.||.|++||+ ++..+..+.+|...|.+++|   ++++.+|++++.||.|++||
T Consensus        26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~dg~i~iwd  102 (369)
T 3zwl_B           26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDV---DCFTKYCVTGSADYSIKLWD  102 (369)
T ss_dssp             EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTTEEEEEE
T ss_pred             EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEE---cCCCCEEEEEeCCCeEEEEE
Confidence            3456899999999998  679999999999999998 66777888999999999999   77889999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCC-----------------
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSE-----------------  244 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~-----------------  244 (391)
                      +.    ....+..+. +...|.+++|+|+++++++++.+     |.|++||++..........                 
T Consensus       103 ~~----~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (369)
T 3zwl_B          103 VS----NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA  177 (369)
T ss_dssp             TT----TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred             CC----CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc
Confidence            65    334555555 78899999999999999999999     9999999987654221100                 


Q ss_pred             --------CCCCCc-cccccccccccCCC-CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE
Q psy2107         245 --------NGDEGT-TSKKRKKEYSSASS-RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV  313 (391)
Q Consensus       245 --------~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~  313 (391)
                              .+.... .........++... ......+..|...|.+++|++++ .|++++.|+.|++||+++++.+..+.
T Consensus       178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~  257 (369)
T 3zwl_B          178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE  257 (369)
T ss_dssp             EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred             eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence                    000000 01111122233333 56777888899999999999655 58999999999999999999999999


Q ss_pred             CCeeeEEEEECCCCCEEEEeeCCC--------------cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         314 GNKSFFDVHYSPLSKLVITASADK--------------QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       314 ~~~~i~~~~~~p~~~~l~~g~~dg--------------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      ....+.+++|+|+++++++++.++              .+++||....+   ....+.+|...|++++|+| ++.+|+++
T Consensus       258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~s~-~~~~l~s~  333 (369)
T 3zwl_B          258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE---EIGRVQGHFGPLNTVAISP-QGTSYASG  333 (369)
T ss_dssp             CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC---EEEEEECCSSCEEEEEECT-TSSEEEEE
T ss_pred             CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc---chhheecccCcEEEEEECC-CCCEEEEE
Confidence            888999999999999999999888              89999998776   7778889999999999999 66789999


Q ss_pred             eCCCcEEEEecC
Q psy2107         380 SFDNSVKLWDLR  391 (391)
Q Consensus       380 ~~dg~v~iwdlr  391 (391)
                      +.||.|++||++
T Consensus       334 ~~dg~v~iw~~~  345 (369)
T 3zwl_B          334 GEDGFIRLHHFE  345 (369)
T ss_dssp             ETTSEEEEEEEC
T ss_pred             cCCCeEEEEECc
Confidence            999999999974

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.9e-35  Score=255.34  Aligned_cols=265  Identities=17%  Similarity=0.265  Sum_probs=222.8

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....| ++++.+.+          .+.++.+.+|......  .......|...|.+++|+  ++++++++.||.|++|++
T Consensus        22 ~~~~~-~~~~~l~s----------~~~dg~v~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~   88 (313)
T 3odt_A           22 RDVVA-VDDSKVAS----------VSRDGTVRLWSKDDQW--LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL   88 (313)
T ss_dssp             EEEEE-EETTEEEE----------EETTSEEEEEEESSSE--EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred             EEEEe-cCCCEEEE----------EEcCCcEEEEECCCCE--EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence            34567 67755554          2467889999874322  234455699999999998  679999999999999998


Q ss_pred             C----CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCE
Q psy2107         144 R----GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQ  218 (391)
Q Consensus       144 ~----~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~  218 (391)
                      .    ......+.+|...|.+++|     ++.++++++.||.|++||      .......+..|...+.+++|+| ++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~i~~~d------~~~~~~~~~~~~~~v~~~~~~~~~~~~  157 (313)
T 3odt_A           89 FATSGEDPLYTLIGHQGNVCSLSF-----QDGVVISGSWDKTAKVWK------EGSLVYNLQAHNASVWDAKVVSFSENK  157 (313)
T ss_dssp             TCCTTSCC-CEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEE------TTEEEEEEECCSSCEEEEEEEETTTTE
T ss_pred             eecCCCCcccchhhcccCEEEEEe-----cCCEEEEEeCCCCEEEEc------CCcEEEecccCCCceeEEEEccCCCCE
Confidence            3    2446677899999999999     356899999999999999      3356778889999999999998 8999


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEEECCCe
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITSSWDHT  297 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~~~dg~  297 (391)
                      +++++.||.|++||..                               .....+.. |...+.+++|++++.+++++.||.
T Consensus       158 l~~~~~d~~i~i~d~~-------------------------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~  206 (313)
T 3odt_A          158 FLTASADKTIKLWQND-------------------------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGL  206 (313)
T ss_dssp             EEEEETTSCEEEEETT-------------------------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSE
T ss_pred             EEEEECCCCEEEEecC-------------------------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCe
Confidence            9999999999999953                               24556665 899999999998888999999999


Q ss_pred             EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      |++||+++++.+..+..+. .+.+++|+|++ .|++++.||.|++||+++++   ....+..|...|++++|+| ++. +
T Consensus       207 i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~-~~~-~  280 (313)
T 3odt_A          207 IKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS---LKQVITLPAISIWSVDCMS-NGD-I  280 (313)
T ss_dssp             EEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC---EEEEEECSSSCEEEEEECT-TSC-E
T ss_pred             EEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc---eeEEEeccCceEEEEEEcc-CCC-E
Confidence            9999999999999998655 89999999999 68899999999999998876   7778888999999999999 445 6


Q ss_pred             EEeeCCCcEEEEecC
Q psy2107         377 VSASFDNSVKLWDLR  391 (391)
Q Consensus       377 ~s~~~dg~v~iwdlr  391 (391)
                      ++++.||.|++||++
T Consensus       281 ~~~~~dg~i~iw~~~  295 (313)
T 3odt_A          281 IVGSSDNLVRIFSQE  295 (313)
T ss_dssp             EEEETTSCEEEEESC
T ss_pred             EEEeCCCcEEEEeCC
Confidence            779999999999975

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.4e-37  Score=274.54  Aligned_cols=298  Identities=15%  Similarity=0.125  Sum_probs=218.8

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++++++++          .+.++.+.+|............+.+|.+.|++++|+  +++|++++.||+|++||+
T Consensus        15 ~~~~~s~~g~~l~~----------~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~   84 (377)
T 3dwl_C           15 YEHAFNSQRTEFVT----------TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK   84 (377)
T ss_dssp             SCCEECSSSSEEEC----------CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred             EEEEECCCCCEEEE----------ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence            44688999988775          346788999988754223345566899999999998  679999999999999999


Q ss_pred             CCc----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCE
Q psy2107         144 RGE----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQ  218 (391)
Q Consensus       144 ~~~----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~  218 (391)
                      ...    ....+..|...|.+++|   ++++.+|++|+.|+.|++||++... .......+.+ |...|.+++|+|++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~d~~i~iwd~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~  160 (377)
T 3dwl_C           85 RPDGTWKQTLVLLRLNRAATFVRW---SPNEDKFAVGSGARVISVCYFEQEN-DWWVSKHLKRPLRSTILSLDWHPNNVL  160 (377)
T ss_dssp             ----CCCCEEECCCCSSCEEEEEC---CTTSSCCEEEESSSCEEECCC------CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred             CCCCceeeeeEecccCCceEEEEE---CCCCCEEEEEecCCeEEEEEECCcc-cceeeeEeecccCCCeEEEEEcCCCCE
Confidence            543    46678899999999999   7788899999999999999976322 1223566667 9999999999999999


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHT  297 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~  297 (391)
                      |++|+.||.|++||++.............  .         .......++..+ +|...|.+++|+|++ .|++++.|+.
T Consensus       161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~---------~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~  228 (377)
T 3dwl_C          161 LAAGCADRKAYVLSAYVRDVDAKPEASVW--G---------SRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS  228 (377)
T ss_dssp             EEEEESSSCEEEEEECCSSCC-CCCSCSS--C---------SCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE
T ss_pred             EEEEeCCCEEEEEEEEecccCCCcccccc--c---------cccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc
Confidence            99999999999999975443221100000  0         000112344555 899999999999765 5999999999


Q ss_pred             EEEEecccCce----eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------------------
Q psy2107         298 LKIWDAELGGM----KSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----------------------  349 (391)
Q Consensus       298 i~iwd~~~~~~----~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----------------------  349 (391)
                      |++||+.+++.    +..+..+. .+.+++|+|++++|++|+.++.+ +|+......                       
T Consensus       229 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (377)
T 3dwl_C          229 VTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGE  307 (377)
T ss_dssp             EC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCC
T ss_pred             EEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccc
Confidence            99999999887    66777665 79999999999999999866655 776542110                       


Q ss_pred             ----ceEE------E----------------EeccccCcEEEEEECCCCCC---EEEEeeCCCcEEEEec
Q psy2107         350 ----AIVK------S----------------TFSSHKEWVQSVRWSPIDPQ---LFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 ----~~~~------~----------------~~~~h~~~v~~~~~~~~~~~---~l~s~~~dg~v~iwdl  390 (391)
                          ....      .                ....|...|+++++.+.++.   .|+|||.||.|+|||+
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl  377 (377)
T 3dwl_C          308 GREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL  377 (377)
T ss_dssp             CCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred             ccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence                0000      0                11239999999998764444   6999999999999996

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4.5e-37  Score=281.24  Aligned_cols=266  Identities=10%  Similarity=0.073  Sum_probs=203.3

Q ss_pred             CCccceEEEEEEeccCCCC--CCcccCCCCcEEEEEecC--------CEEEEEECCCeEEEEcCCCce------------
Q psy2107          90 ISSENVIDVEYLESTPTPS--PLDCILHDDWVSAIDFHN--------DWILTGCYDHSVHIWTRRGEH------------  147 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~--~~~~~~h~~~V~~~~~~~--------~~l~t~~~dg~i~iwd~~~~~------------  147 (391)
                      .+.++.+++|.........  ...+.+|.+.|.+++|++        .+||+++.||+|+|||+....            
T Consensus       179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p  258 (524)
T 2j04_B          179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP  258 (524)
T ss_dssp             ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred             CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence            3577899999875432211  122456789999999984        499999999999999994321            


Q ss_pred             EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE--EEcCCC-CEEEEEeC
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV--TVSESR-QQFATGGW  224 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l--~~~~~~-~~l~sg~~  224 (391)
                      ...+.+|...|++++|   +++ ..|++|+.||+|++||++...   .+...+.+|...|.++  +|+|++ .+|++|+.
T Consensus       259 ~~~l~~h~~~v~sv~~---s~~-~~lasgs~DgtV~lWD~~~~~---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~  331 (524)
T 2j04_B          259 SLTLSLADSLITTFDF---LSP-TTVVCGFKNGFVAEFDLTDPE---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV  331 (524)
T ss_dssp             SEEECCTTTCEEEEEE---SSS-SEEEEEETTSEEEEEETTBCS---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEET
T ss_pred             eEEEEcCCCCEEEEEe---cCC-CeEEEEeCCCEEEEEECCCCC---CceEEeecccccEEEEEEEcCCCCCeEEEEecc
Confidence            2356789999999999   444 479999999999999975321   2345578999999999  578887 89999999


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC--cccEEEeccCC-eEEEEECCCeEEEE
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE--AISAVQWTAVD-EIITSSWDHTLKIW  301 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~-~l~s~~~dg~i~iw  301 (391)
                      |++|++||+++++                             +...+.+|..  .|.+++|+|++ .+++++.|++|++|
T Consensus       332 D~tvklWD~~~~~-----------------------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lw  382 (524)
T 2j04_B          332 DGYFYIFNPKDIA-----------------------------TTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAV  382 (524)
T ss_dssp             TSEEEEECGGGHH-----------------------------HHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEE
T ss_pred             CCeEEEEECCCCC-----------------------------cccccccccccCcccceEeCCCcCeEEEeCCCCcEEEE
Confidence            9999999997633                             3334555543  58899999854 68899999999999


Q ss_pred             ecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC-------c------------------------
Q psy2107         302 DAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE-------G------------------------  349 (391)
Q Consensus       302 d~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~-------~------------------------  349 (391)
                      |++++.++.++..|. .|.+++|+|++++|++|+.||+|++||+....       .                        
T Consensus       383 d~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~  462 (524)
T 2j04_B          383 PSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDS  462 (524)
T ss_dssp             ETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECC
T ss_pred             ECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccC
Confidence            999998877776655 89999999999999999999999999853210       0                        


Q ss_pred             ----------ceEEEEeccccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         350 ----------AIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       350 ----------~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                                ......+.+|...|++++|+|++  +.++++|+.||.|+||+++
T Consensus       463 ~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~  516 (524)
T 2j04_B          463 SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS  516 (524)
T ss_dssp             CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred             CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence                      11233456788999999999954  4589999999999999985

>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}

Probab=100.00  E-value=3.8e-36  Score=287.44  Aligned_cols=241  Identities=22%  Similarity=0.375  Sum_probs=202.6

Q ss_pred             ccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         112 CILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       112 ~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      +.+|.+.|++++|+   +++|++|+.||+|++|++..      .....+.+|...|.+++|   ++++.+|++|+.||+|
T Consensus       378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~---s~~g~~l~sgs~Dg~v  454 (694)
T 3dm0_A          378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL---SSDGQFALSGSWDGEL  454 (694)
T ss_dssp             EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred             cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE---CCCCCEEEEEeCCCcE
Confidence            45799999999997   46999999999999999842      234577899999999999   7789999999999999


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ++||+.    ....+..+.+|...|.+++|+|++++|++|+.|+.|++||......                        
T Consensus       455 ~vwd~~----~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~------------------------  506 (694)
T 3dm0_A          455 RLWDLA----AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK------------------------  506 (694)
T ss_dssp             EEEETT----TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE------------------------
T ss_pred             EEEECC----CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc------------------------
Confidence            999964    3466788899999999999999999999999999999999754211                        


Q ss_pred             CCCCceeeecCccCcccEEEeccCC---eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCc
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVD---EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQ  338 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~---~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~  338 (391)
                        ........+|...|.+++|++++   .+++++.|++|++||+++++....+..|. .|.+++|+|++++|++|+.||.
T Consensus       507 --~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~  584 (694)
T 3dm0_A          507 --YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV  584 (694)
T ss_dssp             --EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB
T ss_pred             --eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe
Confidence              00111224688999999999754   59999999999999999999988888765 8999999999999999999999


Q ss_pred             EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++||+++++   .+..+. +...|.+++|+| ++.++++++ |+.|+|||++
T Consensus       585 i~iwd~~~~~---~~~~~~-~~~~v~~~~~sp-~~~~l~~~~-~~~i~iwd~~  631 (694)
T 3dm0_A          585 VLLWDLAEGK---KLYSLE-ANSVIHALCFSP-NRYWLCAAT-EHGIKIWDLE  631 (694)
T ss_dssp             CEEEETTTTE---EEECCB-CSSCEEEEEECS-SSSEEEEEE-TTEEEEEETT
T ss_pred             EEEEECCCCc---eEEEec-CCCcEEEEEEcC-CCcEEEEEc-CCCEEEEECC
Confidence            9999998765   555554 456799999999 666666655 6679999974

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=6.4e-37  Score=276.79  Aligned_cols=243  Identities=18%  Similarity=0.262  Sum_probs=189.5

Q ss_pred             cCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         113 ILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       113 ~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .+|...|+||+|+   +++||+|+.||+|+|||+..   .....+.+|.+.|++|+|+|.  ++.+|++|+.||+|++||
T Consensus       116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~--~~~~l~s~s~D~~v~iwd  193 (435)
T 4e54_B          116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL--NTNQFYASSMEGTTRLQD  193 (435)
T ss_dssp             EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSS--CTTEEEEECSSSCEEEEE
T ss_pred             CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEee
Confidence            4588999999998   45899999999999999843   344566789999999999543  678999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      ++  ............+...+.+++|+|++++|++|+.||.|++||++.                              +
T Consensus       194 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------------------------------~  241 (435)
T 4e54_B          194 FK--GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------------------------------K  241 (435)
T ss_dssp             TT--SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------------------------------C
T ss_pred             cc--CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------------------------------c
Confidence            64  332222222233445688999999999999999999999999864                              2


Q ss_pred             ceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEE----ECCeeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         267 PLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEI----VGNKSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~----~~~~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      .+..+.+|...|.+++|+|.+  .+++++.|+.|++||+++.+....+    .+...|.+++|+|+|++|++|+.||.|+
T Consensus       242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~  321 (435)
T 4e54_B          242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIR  321 (435)
T ss_dssp             BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEE
T ss_pred             eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEE
Confidence            345677899999999999654  5788999999999999887644333    2345899999999999999999999999


Q ss_pred             EEcCCCCCcc---------------------------------------------------------eEEEE-eccccCc
Q psy2107         341 LYDPKVKEGA---------------------------------------------------------IVKST-FSSHKEW  362 (391)
Q Consensus       341 iwd~~~~~~~---------------------------------------------------------~~~~~-~~~h~~~  362 (391)
                      +||++.....                                                         .++.. ..+|...
T Consensus       322 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~  401 (435)
T 4e54_B          322 VYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG  401 (435)
T ss_dssp             EEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC
T ss_pred             EEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc
Confidence            9998643200                                                         01111 2356677


Q ss_pred             EEEE-EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         363 VQSV-RWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       363 v~~~-~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |.++ +|+| ++.+|++|+ |+.|+|||++
T Consensus       402 v~s~~~fsp-dg~~lasg~-d~~i~iW~~~  429 (435)
T 4e54_B          402 ISSLNEFNP-MGDTLASAM-GYHILIWSQQ  429 (435)
T ss_dssp             CCCEEEECT-TSSCEEEEC-SSEEEECCCC
T ss_pred             EEEEEEECC-CCCEEEEEc-CCcEEEEECC
Confidence            7777 6999 566788776 8899999975

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=100.00  E-value=2e-35  Score=260.41  Aligned_cols=283  Identities=17%  Similarity=0.115  Sum_probs=208.1

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC--------CCcccCCCCcEEEEEecCCEEEEEE----
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS--------PLDCILHDDWVSAIDFHNDWILTGC----  133 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~h~~~V~~~~~~~~~l~t~~----  133 (391)
                      ...+|++||++|.++-..-   .....++.+++|.........        ...+.+|.+.|.+++++++.+++|+    
T Consensus        18 ~sv~fs~dg~~l~sGGg~~---~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~~   94 (365)
T 4h5i_A           18 YGAKFLNNDTLLVAGGGGE---GNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNENS   94 (365)
T ss_dssp             EEEEEEETTEEEEEEECCS---SSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCCH
T ss_pred             EEEEEeCCCcEEEEECCCc---cccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCCc
Confidence            4468999999987532100   000124578898875433221        1235578999999999999888875    


Q ss_pred             -------CCCeEEEEcCCC--ceEEe--------ccCCCCCeeEEEEEecCCCCeEEEE--EeCCCcEEEEeecCCCCce
Q psy2107         134 -------YDHSVHIWTRRG--EHKLN--------IPGHGGPVKGVAWLYNDGKDAAFIS--VSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       134 -------~dg~i~iwd~~~--~~~~~--------~~~~~~~v~~l~~~~~~~~~~~l~s--~~~dg~v~iwd~~~~~~~~  194 (391)
                             .|+.+++|++..  ..+..        ...+...+.+++|   +|+++++++  ++.|++|++||+.    ..
T Consensus        95 ~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f---SpDg~~la~as~~~d~~i~iwd~~----~~  167 (365)
T 4h5i_A           95 TKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI---SREGTVAAIASSKVPAIMRIIDPS----DL  167 (365)
T ss_dssp             HHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE---CTTSSCEEEEESCSSCEEEEEETT----TT
T ss_pred             cEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE---cCCCCEEEEEECCCCCEEEEeECC----CC
Confidence                   467899998732  22211        1234556899999   778887764  4478999999954    34


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      .++..+. |...|.+++|+|+++++++++.+ .+++|+..++..                           ........|
T Consensus       168 ~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~---------------------------~~~~~~~~~  218 (365)
T 4h5i_A          168 TEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSC---------------------------IARKTDFDK  218 (365)
T ss_dssp             EEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCE---------------------------EEEECCCCT
T ss_pred             cEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcc---------------------------eeeeecCCC
Confidence            5566665 77889999999999999999865 566777655332                           122344578


Q ss_pred             cCcccEEEeccCCe-EEEEECCC----eEEEEecccCcee----EEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         275 KEAISAVQWTAVDE-IITSSWDH----TLKIWDAELGGMK----SEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       275 ~~~v~~~~~~~~~~-l~s~~~dg----~i~iwd~~~~~~~----~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      ...|.+++|+|++. +++++.|+    .+++||+......    ..+..+ .+|++++|+|+|++||+|+.|+.|+|||+
T Consensus       219 ~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~  298 (365)
T 4h5i_A          219 NWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKL  298 (365)
T ss_dssp             TEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEET
T ss_pred             CCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEEC
Confidence            88999999997665 78888777    6889998776532    334444 48999999999999999999999999999


Q ss_pred             CCCCcceEEEE-eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKST-FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++++   ++.. +.+|...|++++|+| ++.+|+|||.|++|+|||+.
T Consensus       299 ~~~~---~~~~~~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip  342 (365)
T 4h5i_A          299 KDLS---MSKIFKQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLP  342 (365)
T ss_dssp             TTTE---EEEEETTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECC
T ss_pred             CCCc---EEEEecCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcC
Confidence            8755   5555 579999999999999 67799999999999999983

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=7.9e-36  Score=262.58  Aligned_cols=285  Identities=14%  Similarity=0.230  Sum_probs=221.1

Q ss_pred             ceeeEEeCC-eEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecC-----CEEEEEECCCeEE
Q psy2107          66 IQFDFLIAG-ELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHN-----DWILTGCYDHSVH  139 (391)
Q Consensus        66 ~~~~f~~~~-~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~-----~~l~t~~~dg~i~  139 (391)
                      ....|.+++ .++++...       ...++.+.+|....... ......+|...|++++|++     ++|++|+.||.|+
T Consensus        22 ~~~~~~p~~~~l~~~~s~-------~~~d~~v~iw~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~   93 (357)
T 3i2n_A           22 FDCKWVPCSAKFVTMGNF-------ARGTGVIQLYEIQHGDL-KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH   93 (357)
T ss_dssp             EEEEECTTSSEEEEEEC---------CCCEEEEEEEECSSSE-EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred             EEEEEcCCCceEEEecCc-------cCCCcEEEEEeCCCCcc-cceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence            446788877 45543110       01278899998764322 1233447999999999972     7899999999999


Q ss_pred             EEcCC-Cc-eEEeccCCCCCeeEEEEEe---cCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC----CeEEE
Q psy2107         140 IWTRR-GE-HKLNIPGHGGPVKGVAWLY---NDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER----GLETV  210 (391)
Q Consensus       140 iwd~~-~~-~~~~~~~~~~~v~~l~~~~---~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~----~v~~l  210 (391)
                      +||+. +. ....+.+|...|.++.|.+   .++++.+|++++.||.|++||++...   ..+..+..|.+    .+.++
T Consensus        94 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~~~~~~v~~~  170 (357)
T 3i2n_A           94 IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKD---DPVANMEPVQGENKRDCWTV  170 (357)
T ss_dssp             EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCS---SCSEEECCCTTSCCCCEEEE
T ss_pred             EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCC---CcceeccccCCCCCCceEEE
Confidence            99994 44 6778889999999998865   26788899999999999999976332   13444544443    89999


Q ss_pred             E----EcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-
Q psy2107         211 T----VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-  285 (391)
Q Consensus       211 ~----~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-  285 (391)
                      +    |+|++++|++|+.||.|++||+++++                             . .....|...|.+++|+| 
T Consensus       171 ~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------------------------~-~~~~~~~~~v~~~~~~~~  220 (357)
T 3i2n_A          171 AFGNAYNQEERVVCAGYDNGDIKLFDLRNMA-----------------------------L-RWETNIKNGVCSLEFDRK  220 (357)
T ss_dssp             EEECCCC-CCCEEEEEETTSEEEEEETTTTE-----------------------------E-EEEEECSSCEEEEEESCS
T ss_pred             EEEeccCCCCCEEEEEccCCeEEEEECccCc-----------------------------e-eeecCCCCceEEEEcCCC
Confidence            8    78899999999999999999997632                             2 33456888999999996 


Q ss_pred             ---CCeEEEEECCCeEEEEecccCceeEEEE-----C-CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcc-----
Q psy2107         286 ---VDEIITSSWDHTLKIWDAELGGMKSEIV-----G-NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGA-----  350 (391)
Q Consensus       286 ---~~~l~s~~~dg~i~iwd~~~~~~~~~~~-----~-~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~-----  350 (391)
                         +..+++++.||.|++||+++++....+.     . ...+.+++|+|+++ +|++|+.||.|++||++.....     
T Consensus       221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~  300 (357)
T 3i2n_A          221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDS  300 (357)
T ss_dssp             SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCT
T ss_pred             CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccC
Confidence               4569999999999999999877665553     4 44899999999998 8999999999999998764332     


Q ss_pred             -----------eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         351 -----------IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       351 -----------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                 ..+..+.+|...|++++|+|++..++++++.||.|++||+.
T Consensus       301 ~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~  352 (357)
T 3i2n_A          301 EGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT  352 (357)
T ss_dssp             TSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             CCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence                       36677889999999999999665544489999999999974

>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.9e-37  Score=280.00  Aligned_cols=229  Identities=13%  Similarity=0.068  Sum_probs=181.7

Q ss_pred             EEEEECCCeEEEEcCCCce-----EEeccCCCCCeeEEEEEec---CCCCeEEEEEeCCCcEEEEeecCCCCc-------
Q psy2107         129 ILTGCYDHSVHIWTRRGEH-----KLNIPGHGGPVKGVAWLYN---DGKDAAFISVSTDQTAMIWEWKVESNS-------  193 (391)
Q Consensus       129 l~t~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~---~~~~~~l~s~~~dg~v~iwd~~~~~~~-------  193 (391)
                      +++++.||+|+||++++..     ...+..|.+.|.+++|+|.   ++++.+||+++.||+|++||+......       
T Consensus       176 laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~  255 (524)
T 2j04_B          176 FDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC  255 (524)
T ss_dssp             ------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC
T ss_pred             hccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee
Confidence            4556688999999984332     1345678899999999663   123679999999999999997533211       


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      ..+...+.+|...|++++|++++ .|++|+.||.|++||++++.                            .+...+.+
T Consensus       256 ~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~----------------------------~~~~~~~~  306 (524)
T 2j04_B          256 EKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE----------------------------VPSFYDQV  306 (524)
T ss_dssp             CSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS----------------------------SCSEEEEC
T ss_pred             cCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC----------------------------CceEEeec
Confidence            11234678899999999999864 89999999999999997532                            24556789


Q ss_pred             ccCcccEE--EeccC--CeEEEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         274 HKEAISAV--QWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       274 ~~~~v~~~--~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      |...|.++  .|+++  ..|++++.|++|+|||++++++...+..+.   .+.+++|+|+++.+++++.|+.|++||++.
T Consensus       307 H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~  386 (524)
T 2j04_B          307 HDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA  386 (524)
T ss_dssp             SSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred             ccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence            99999999  56665  468999999999999999988776665443   478999999999999999999999999987


Q ss_pred             CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..   +...+.+|.+.|++++|+| ++.+|+||+.||+|++||+
T Consensus       387 ~~---~~~~l~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~  426 (524)
T 2j04_B          387 AF---AVHPLVSRETTITAIGVSR-LHPMVLAGSADGSLIITNA  426 (524)
T ss_dssp             TT---CCEEEEECSSCEEEEECCS-SCCBCEEEETTTEEECCBS
T ss_pred             cc---cceeeecCCCceEEEEeCC-CCCeEEEEECCCEEEEEec
Confidence            65   4556778999999999999 5567999999999999996

>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X

Probab=100.00  E-value=1.6e-35  Score=264.68  Aligned_cols=268  Identities=13%  Similarity=0.160  Sum_probs=216.9

Q ss_pred             CccceEEEEEEeccC----CCCCCcccCCCCcEEEEEec------C---CEEEEEECCCeEEEEcCC-Cce-----EEec
Q psy2107          91 SSENVIDVEYLESTP----TPSPLDCILHDDWVSAIDFH------N---DWILTGCYDHSVHIWTRR-GEH-----KLNI  151 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~----~~~~~~~~~h~~~V~~~~~~------~---~~l~t~~~dg~i~iwd~~-~~~-----~~~~  151 (391)
                      +.++.+.+|......    ......+.+|...|++++|+      +   ++|++++.||.|++||+. +..     ...+
T Consensus        33 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~  112 (397)
T 1sq9_A           33 SGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL  112 (397)
T ss_dssp             ETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE
T ss_pred             cCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceee
Confidence            457889999876554    11244556799999999997      4   699999999999999984 333     6777


Q ss_pred             cCC-----CCCeeEEEEEecC-CCCeE-EEEEeCCCcEEEEeecC------CCCc-eeEEEEE-------ecCCCCeEEE
Q psy2107         152 PGH-----GGPVKGVAWLYND-GKDAA-FISVSTDQTAMIWEWKV------ESNS-IECIHVC-------RGHERGLETV  210 (391)
Q Consensus       152 ~~~-----~~~v~~l~~~~~~-~~~~~-l~s~~~dg~v~iwd~~~------~~~~-~~~~~~~-------~~~~~~v~~l  210 (391)
                      ..|     ...|.+++|++.. +++.+ |++++.||.|++||++.      .... ......+       ..|...|.++
T Consensus       113 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  192 (397)
T 1sq9_A          113 DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV  192 (397)
T ss_dssp             CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEE
T ss_pred             cccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEE
Confidence            888     5999999995211 57888 99999999999999874      2211 1111244       4488999999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC---c---cCcccEEEec
Q psy2107         211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG---H---KEAISAVQWT  284 (391)
Q Consensus       211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~~  284 (391)
                      +|+|++ +|++|+.||.|++||+++                             ..++..+..   |   ...|.+++|+
T Consensus       193 ~~~~~~-~l~~~~~dg~i~i~d~~~-----------------------------~~~~~~~~~~~~h~~~~~~i~~i~~~  242 (397)
T 1sq9_A          193 DISERG-LIATGFNNGTVQISELST-----------------------------LRPLYNFESQHSMINNSNSIRSVKFS  242 (397)
T ss_dssp             EECTTS-EEEEECTTSEEEEEETTT-----------------------------TEEEEEEECCC---CCCCCEEEEEEC
T ss_pred             EECCCc-eEEEEeCCCcEEEEECCC-----------------------------CceeEEEeccccccccCCccceEEEC
Confidence            999999 999999999999999976                             335667777   8   9999999999


Q ss_pred             cC-CeEEEEECC---CeEEEEecccCceeEEEEC--------------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         285 AV-DEIITSSWD---HTLKIWDAELGGMKSEIVG--------------NKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       285 ~~-~~l~s~~~d---g~i~iwd~~~~~~~~~~~~--------------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ++ ..|++++.|   +.|++||+++++.+..+..              ...+.+++|+|++++|++|+.||.|++||++.
T Consensus       243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~  322 (397)
T 1sq9_A          243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT  322 (397)
T ss_dssp             SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred             CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            65 458899999   9999999999999988875              44899999999999999999999999999987


Q ss_pred             CCcceEEEEec------cc---------------cCcEEEEEECCCCC---------CEEEEeeCCCcEEEEecC
Q psy2107         347 KEGAIVKSTFS------SH---------------KEWVQSVRWSPIDP---------QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       347 ~~~~~~~~~~~------~h---------------~~~v~~~~~~~~~~---------~~l~s~~~dg~v~iwdlr  391 (391)
                      .+   .+..+.      +|               ...|++++|+|++.         .+|++++.||.|++||++
T Consensus       323 ~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~  394 (397)
T 1sq9_A          323 KE---RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA  394 (397)
T ss_dssp             TE---EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred             Cc---eeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence            65   666777      77               99999999999542         689999999999999973

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-36  Score=273.78  Aligned_cols=279  Identities=12%  Similarity=0.169  Sum_probs=218.2

Q ss_pred             ceeeEEe-CCeEehhhHHHHHHHcCCCccceEEEEEEec---cCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEE
Q psy2107          66 IQFDFLI-AGELLRTSVTSFLESKGISSENVIDVEYLES---TPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVH  139 (391)
Q Consensus        66 ~~~~f~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~  139 (391)
                      ...+|.+ +++++++          .+.++.+++|....   ..........+|...|++++|+  +++|++|+.||+|+
T Consensus        67 ~~~~~s~~~~~~l~s----------~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~  136 (437)
T 3gre_A           67 TSSAVSPGETPYLIT----------GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQII  136 (437)
T ss_dssp             EEEEEECSSSCEEEE----------EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred             EEEEECCCCCCEEEE----------ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEE
Confidence            5568999 8877765          34688999999876   3322233344699999999998  57999999999999


Q ss_pred             EEcCC----CceEEec----------cC--CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-
Q psy2107         140 IWTRR----GEHKLNI----------PG--HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-  202 (391)
Q Consensus       140 iwd~~----~~~~~~~----------~~--~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-  202 (391)
                      +||+.    +......          ..  +...+.++.+.. ++++.++++|+.||.|++||++    ...++..+.+ 
T Consensus       137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~d~~i~iwd~~----~~~~~~~~~~~  211 (437)
T 3gre_A          137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV-NEEKSLLVALTNLSRVIIFDIR----TLERLQIIENS  211 (437)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE-CSSCEEEEEEETTSEEEEEETT----TCCEEEEEECC
T ss_pred             EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE-cCCCCEEEEEeCCCeEEEEeCC----CCeeeEEEccC
Confidence            99982    3222211          12  667788888654 5788999999999999999965    3456777777 


Q ss_pred             -CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccE
Q psy2107         203 -HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISA  280 (391)
Q Consensus       203 -~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  280 (391)
                       |...|++++|+|++++|++|+.||.|++||+++                             ..++..+. .|...|.+
T Consensus       212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-----------------------------~~~~~~~~~~~~~~v~~  262 (437)
T 3gre_A          212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-----------------------------NVLIRSWSFGDHAPITH  262 (437)
T ss_dssp             GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-----------------------------TEEEEEEBCTTCEEEEE
T ss_pred             CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-----------------------------ccEEEEEecCCCCceEE
Confidence             899999999999999999999999999999976                             33555554 67889999


Q ss_pred             EEecc----CC-eEEEEECCCeEEEEecccCceeEEEECC---------------------------eeeEEEEECCCCC
Q psy2107         281 VQWTA----VD-EIITSSWDHTLKIWDAELGGMKSEIVGN---------------------------KSFFDVHYSPLSK  328 (391)
Q Consensus       281 ~~~~~----~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------------------------~~i~~~~~~p~~~  328 (391)
                      ++|+|    ++ .+++++.||.|++||+++++.+..+..+                           ..|.+++|+ +++
T Consensus       263 ~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~  341 (437)
T 3gre_A          263 VEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK  341 (437)
T ss_dssp             EEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred             EEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence            97763    34 5889999999999999999988888743                           247888999 778


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEE----------------------------------EeccccCcEEEEEECCC-CC
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKS----------------------------------TFSSHKEWVQSVRWSPI-DP  373 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~----------------------------------~~~~h~~~v~~~~~~~~-~~  373 (391)
                      +|++|+.|+.|++||+..++......                                  ....|...|++++|+++ +.
T Consensus       342 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~  421 (437)
T 3gre_A          342 ILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDET  421 (437)
T ss_dssp             EEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSS
T ss_pred             EEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCc
Confidence            99999999999999998765221111                                  01228999999999995 36


Q ss_pred             CEEEEeeCCCcEEEEe
Q psy2107         374 QLFVSASFDNSVKLWD  389 (391)
Q Consensus       374 ~~l~s~~~dg~v~iwd  389 (391)
                      .+|+||+.||.|+||+
T Consensus       422 ~~l~s~~~dG~I~iw~  437 (437)
T 3gre_A          422 PLLVACDNSGLIGIFQ  437 (437)
T ss_dssp             EEEEEEETTSCEEEEC
T ss_pred             eEEEEEcCCceEEEeC
Confidence            6999999999999995

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=1.8e-35  Score=266.25  Aligned_cols=296  Identities=11%  Similarity=0.087  Sum_probs=216.0

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR  144 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~  144 (391)
                      ...|.++++.+++          .+.++.+.+|.........  ....| ..+....++  +++|++|+.||.|++||+.
T Consensus        61 ~~~~s~~g~~l~~----------~~~d~~v~i~d~~~~~~~~--~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~  127 (420)
T 3vl1_A           61 GNTFEKVGSHLYK----------ARLDGHDFLFNTIIRDGSK--MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSN  127 (420)
T ss_dssp             TCEEEEEETTEEE----------EEETTEEEEEECCSEETTT--TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTT
T ss_pred             ceeeeecCCeEEE----------EEcCCcEEEEEecccceee--EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCC
Confidence            4678998876654          2357788999865443322  22233 444444555  7799999999999999995


Q ss_pred             C-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         145 G-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       145 ~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      . .....+.+|...|.+++|   ++++.+|++|+.||.|++||++    ....+..+.+|...|.+++|+|++++|++|+
T Consensus       128 ~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~s~d~~i~iwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  200 (420)
T 3vl1_A          128 FNLQREIDQAHVSEITKLKF---FPSGEALISSSQDMQLKIWSVK----DGSNPRTLIGHRATVTDIAIIDRGRNVLSAS  200 (420)
T ss_dssp             SCEEEEETTSSSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT----TCCCCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred             CcceeeecccccCccEEEEE---CCCCCEEEEEeCCCeEEEEeCC----CCcCceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence            4 444556799999999999   7788899999999999999965    2345567789999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEe
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWD  302 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd  302 (391)
                      .||.|++||+++++..............  .....+...   ........+...+.+++|++++ .+++++.||.|++||
T Consensus       201 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~---~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d  275 (420)
T 3vl1_A          201 LDGTIRLWECGTGTTIHTFNRKENPHDG--VNSIALFVG---TDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHN  275 (420)
T ss_dssp             TTSCEEEEETTTTEEEEEECBTTBTTCC--EEEEEEEEC---CCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEE
T ss_pred             CCCcEEEeECCCCceeEEeecCCCCCCC--ccEEEEecC---CcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEE
Confidence            9999999999875532211100000000  000000000   0000112345677788888666 588999999999999


Q ss_pred             cccCceeEEEEC--CeeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEE
Q psy2107         303 AELGGMKSEIVG--NKSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       303 ~~~~~~~~~~~~--~~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s  378 (391)
                      +++++....+..  ...+.+++|+|+++ +|++|+.||.|++||++....  ++..+.+ |...|+++.|.+  +.+|++
T Consensus       276 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~--~~~l~s  351 (420)
T 3vl1_A          276 VFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC--PVGEFLINEGTPINNVYFAA--GALFVS  351 (420)
T ss_dssp             TTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEEESTTSCEEEEEEET--TEEEEE
T ss_pred             CCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--chhhhhccCCCCceEEEeCC--CCEEEE
Confidence            999988877754  34899999999999 999999999999999987542  2344444 777888886653  468999


Q ss_pred             eeCCCcEEEEecC
Q psy2107         379 ASFDNSVKLWDLR  391 (391)
Q Consensus       379 ~~~dg~v~iwdlr  391 (391)
                      ++.||.|++||++
T Consensus       352 ~~~d~~v~iw~~~  364 (420)
T 3vl1_A          352 SGFDTSIKLDIIS  364 (420)
T ss_dssp             ETTTEEEEEEEEC
T ss_pred             ecCCccEEEEecc
Confidence            9999999999974

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.4e-34  Score=264.00  Aligned_cols=260  Identities=24%  Similarity=0.403  Sum_probs=212.8

Q ss_pred             cccCCCCc-EEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         111 DCILHDDW-VSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       111 ~~~~h~~~-V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .+.+|.+. ++|+.++++++++|+.||+|++||+ +++.+..+.+|.+.|.+++|   ++++ ++++|+.||+|++||++
T Consensus       116 ~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~---~~~~-~l~s~s~dg~i~vwd~~  191 (464)
T 3v7d_B          116 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKY---AHGG-ILVSGSTDRTVRVWDIK  191 (464)
T ss_dssp             EEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CSTT-EEEEEETTSCEEEEETT
T ss_pred             EEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEE---cCCC-EEEEEeCCCCEEEEECC
Confidence            45578877 5899999999999999999999998 66777788999999999999   5555 89999999999999965


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVS--ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                          ....+..+.+|...|.+++|+  ++++++++|+.||.|++||+++.............      ............
T Consensus       192 ----~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  261 (464)
T 3v7d_B          192 ----KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY------PLVFHTPEENPY  261 (464)
T ss_dssp             ----TTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS------SEEESCGGGCTT
T ss_pred             ----CCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc------ceEeeccCCCeE
Confidence                346788889999999999998  57789999999999999999876543221111100      000011112223


Q ss_pred             ceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ....+.+|...+.++... +..+++++.|+.|++||+++++.+..+..+. .+.+++|+|+++++++|+.||.|++||++
T Consensus       262 ~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~  340 (464)
T 3v7d_B          262 FVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE  340 (464)
T ss_dssp             EEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             EEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence            456778899998888543 4689999999999999999999999888665 89999999999999999999999999998


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +++   ++..+.+|...|.+++|++   .+|++++.||.|++||++
T Consensus       341 ~~~---~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~  380 (464)
T 3v7d_B          341 NGE---LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAN  380 (464)
T ss_dssp             TTE---EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETT
T ss_pred             CCc---EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECC
Confidence            766   7788999999999999974   689999999999999984

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3e-35  Score=265.99  Aligned_cols=269  Identities=20%  Similarity=0.359  Sum_probs=222.6

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCc
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGE  146 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~  146 (391)
                      +.+..+++.+.+          .+.++.+.+|......  ....+.+|.+.|++++|+++++++|+.||+|++||+ ++.
T Consensus       137 ~~~~~d~~~l~~----------g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~  204 (435)
T 1p22_A          137 YCLQYDDQKIVS----------GLRDNTIKIWDKNTLE--CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGE  204 (435)
T ss_dssp             EEEECCSSEEEE----------EESSSCEEEEESSSCC--EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCC
T ss_pred             EEEEECCCEEEE----------EeCCCeEEEEeCCCCe--EEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCc
Confidence            355567766654          2467889999764332  234456799999999999999999999999999999 577


Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                      .+..+.+|...|.+++|   +  +..+++|+.||.|++||+.... .......+.+|...|.+++|  +++++++|+.||
T Consensus       205 ~~~~~~~h~~~v~~l~~---~--~~~l~s~s~dg~i~vwd~~~~~-~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg  276 (435)
T 1p22_A          205 MLNTLIHHCEAVLHLRF---N--NGMMVTCSKDRSIAVWDMASPT-DITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR  276 (435)
T ss_dssp             EEEEECCCCSCEEEEEC---C--TTEEEEEETTSCEEEEECSSSS-CCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred             EEEEEcCCCCcEEEEEE---c--CCEEEEeeCCCcEEEEeCCCCC-CceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence            77888999999999999   3  4589999999999999976332 23444677899999999999  678999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG  306 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~  306 (391)
                      .|++||+++                             ...+..+.+|...|.++.++ +..+++|+.||.|++||++++
T Consensus       277 ~i~vwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~~-~~~l~~g~~dg~i~iwd~~~~  326 (435)
T 1p22_A          277 TIKVWNTST-----------------------------CEFVRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG  326 (435)
T ss_dssp             EEEEEETTT-----------------------------CCEEEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTC
T ss_pred             eEEEEECCc-----------------------------CcEEEEEcCCCCcEEEEEeC-CCEEEEEeCCCeEEEEECCCC
Confidence            999999976                             34677888999999999995 578999999999999999999


Q ss_pred             ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc------ceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         307 GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEG------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       307 ~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      +.+..+..+. .+.+++|  ++.+|++|+.||.|++||++....      ......+.+|.+.|++++|+   +.+|+++
T Consensus       327 ~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~---~~~l~s~  401 (435)
T 1p22_A          327 ACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD---EFQIVSS  401 (435)
T ss_dssp             CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC---SSCEEEC
T ss_pred             CEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC---CCEEEEE
Confidence            9999998665 7899998  689999999999999999864321      12567788999999999993   3569999


Q ss_pred             eCCCcEEEEecC
Q psy2107         380 SFDNSVKLWDLR  391 (391)
Q Consensus       380 ~~dg~v~iwdlr  391 (391)
                      +.||.|++||+.
T Consensus       402 s~Dg~i~iwd~~  413 (435)
T 1p22_A          402 SHDDTILIWDFL  413 (435)
T ss_dssp             CSSSEEEEEC--
T ss_pred             eCCCEEEEEECC
Confidence            999999999973

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=100.00  E-value=3.2e-35  Score=265.22  Aligned_cols=252  Identities=20%  Similarity=0.357  Sum_probs=209.7

Q ss_pred             cccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCC-----------CceEEeccCCCCCeeEEEEEecCCCCe-EEEE
Q psy2107         111 DCILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRR-----------GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFIS  175 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~-----------~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s  175 (391)
                      ....|.+.|++++|++   .+|++++.||.|++|++.           ......+.+|...|.+++|   ++++. +|++
T Consensus       123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~---~~~~~~~l~s  199 (430)
T 2xyi_A          123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW---NPNLNGYLLS  199 (430)
T ss_dssp             EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE---CTTSTTEEEE
T ss_pred             EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe---CCCCCCeEEE
Confidence            4457999999999984   489999999999999984           3566678899999999999   66666 9999


Q ss_pred             EeCCCcEEEEeecCCCCc---eeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         176 VSTDQTAMIWEWKVESNS---IECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       176 ~~~dg~v~iwd~~~~~~~---~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      |+.||.|++|++......   ......+.+|...|.+++|+| ++.+|++++.||.|++||+++...             
T Consensus       200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-------------  266 (430)
T 2xyi_A          200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-------------  266 (430)
T ss_dssp             ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-------------
T ss_pred             EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-------------
Confidence            999999999997642221   122456778999999999999 778999999999999999986431             


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEeccc-CceeEEEECC-eeeEEEEECCCC
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAEL-GGMKSEIVGN-KSFFDVHYSPLS  327 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~-~~~~~~~~~~-~~i~~~~~~p~~  327 (391)
                                   ..++..+..|...|.+++|+|.+  .+++|+.||.|++||+++ ...+..+..+ ..|.+++|+|++
T Consensus       267 -------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~  333 (430)
T 2xyi_A          267 -------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN  333 (430)
T ss_dssp             -------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred             -------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence                         23566777899999999999755  488999999999999998 5667777755 489999999998


Q ss_pred             C-EEEEeeCCCcEEEEcCCCCCc-----------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         328 K-LVITASADKQIRLYDPKVKEG-----------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       328 ~-~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      + +|++++.|+.|++||+.....           ..++..+.+|...|++++|+|++..+|++++.||.|+||++.
T Consensus       334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~  409 (430)
T 2xyi_A          334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA  409 (430)
T ss_dssp             TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred             CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence            5 699999999999999876221           136778889999999999999665599999999999999974

>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C

Probab=100.00  E-value=4.4e-35  Score=259.36  Aligned_cols=243  Identities=19%  Similarity=0.264  Sum_probs=204.2

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .|.++|++++|+  +++|++|+.||.|++||+...   ....+.+|...|.+++|   ++++.+|++++.||.|++||+.
T Consensus         6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~~~~~dg~i~vwd~~   82 (372)
T 1k8k_C            6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW---APDSNRIVTCGTDRNAYVWTLK   82 (372)
T ss_dssp             SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE---ETTTTEEEEEETTSCEEEEEEE
T ss_pred             ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEE---eCCCCEEEEEcCCCeEEEEECC
Confidence            488999999998  669999999999999999554   67788899999999999   5578899999999999999975


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                        .........+..|...|.+++|+|++++|++|+.||.|++||++.....                         ....
T Consensus        83 --~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~-------------------------~~~~  135 (372)
T 1k8k_C           83 --GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW-------------------------WVCK  135 (372)
T ss_dssp             --TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE-------------------------EEEE
T ss_pred             --CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcc-------------------------eeee
Confidence              3333445555779999999999999999999999999999999763310                         0012


Q ss_pred             eeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc------------------cCceeEEEECCe-eeEEEEECCCCC
Q psy2107         269 ITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE------------------LGGMKSEIVGNK-SFFDVHYSPLSK  328 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~------------------~~~~~~~~~~~~-~i~~~~~~p~~~  328 (391)
                      .....|...|.+++|++++ .+++++.|+.|++||++                  .++.+..+..+. .+.+++|+|+++
T Consensus       136 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  215 (372)
T 1k8k_C          136 HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGS  215 (372)
T ss_dssp             EECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSS
T ss_pred             eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCC
Confidence            2335788999999999655 68999999999999953                  567777776554 899999999999


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|++++.|+.|++||++..+   .+..+..|...|++++|+| ++.+++++ .||.|++||++
T Consensus       216 ~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~i~~~~  273 (372)
T 1k8k_C          216 RVAWVSHDSTVCLADADKKM---AVATLASETLPLLAVTFIT-ESSLVAAG-HDCFPVLFTYD  273 (372)
T ss_dssp             EEEEEETTTEEEEEEGGGTT---EEEEEECSSCCEEEEEEEE-TTEEEEEE-TTSSCEEEEEE
T ss_pred             EEEEEeCCCEEEEEECCCCc---eeEEEccCCCCeEEEEEec-CCCEEEEE-eCCeEEEEEcc
Confidence            99999999999999998766   7778889999999999999 56667666 89999999973

>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*

Probab=100.00  E-value=1.1e-34  Score=257.96  Aligned_cols=240  Identities=20%  Similarity=0.253  Sum_probs=192.7

Q ss_pred             ccCCCCcEEEEEec--C-CEEEEEECCCeEEEEcCC-CceEEec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         112 CILHDDWVSAIDFH--N-DWILTGCYDHSVHIWTRR-GEHKLNI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~-~~l~t~~~dg~i~iwd~~-~~~~~~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      +.+|.+.|++++|+  + ++|++|+.||.|+|||+. +.....+  .+|...|.+++|+|.  ++.+|++++.||.|++|
T Consensus        69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iw  146 (383)
T 3ei3_B           69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--NTNQLFVSSIRGATTLR  146 (383)
T ss_dssp             ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--EEEEEEEEETTTEEEEE
T ss_pred             ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--CCCEEEEEeCCCEEEEE
Confidence            35799999999998  4 699999999999999994 3333333  479999999999542  67899999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      |++  ............|...|.+++|+|++++|++|+.||.|++||++                              .
T Consensus       147 d~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------------------------------~  194 (383)
T 3ei3_B          147 DFS--GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------------------------------G  194 (383)
T ss_dssp             ETT--SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------------------------------S
T ss_pred             ECC--CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------------------------------C
Confidence            965  32222222223445889999999999999999999999999984                              2


Q ss_pred             CceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEeccc----CceeEEEECCeeeEEEEECC-CCCEEEEeeCCCc
Q psy2107         266 TPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAEL----GGMKSEIVGNKSFFDVHYSP-LSKLVITASADKQ  338 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~  338 (391)
                      .++..+.+|...|.+++|+|++  .+++++.|+.|++||+++    +..+..+.+...+.+++|+| ++++|++++.|+.
T Consensus       195 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~  274 (383)
T 3ei3_B          195 HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE  274 (383)
T ss_dssp             CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE
T ss_pred             CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc
Confidence            3567788999999999999765  699999999999999998    66777777777999999999 9999999999999


Q ss_pred             EEEEcCCCCCcceEEEEeccc-------c----------CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSH-------K----------EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h-------~----------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++||+++....   ..+.+|       .          ..+..++|+|++ .+  +++.||.|++||++
T Consensus       275 i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd~~  338 (383)
T 3ei3_B          275 IRVYSSYDWSKP---DQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYDAN  338 (383)
T ss_dssp             EEEEETTBTTSC---SEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEETT
T ss_pred             EEEEECCCCccc---cccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEecC
Confidence            999999876532   222222       2          344556777733 33  78899999999974

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=4.2e-34  Score=259.32  Aligned_cols=263  Identities=22%  Similarity=0.460  Sum_probs=221.7

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCc
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGE  146 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~  146 (391)
                      ..+.++|+.+.+          .+.++.+.+|......  ....+.+|.+.|.+++|+++++++|+.||+|++||+ ++.
T Consensus       123 ~~~~~~g~~l~s----------g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~  190 (445)
T 2ovr_B          123 TCLQFCGNRIVS----------GSDDNTLKVWSAVTGK--CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGE  190 (445)
T ss_dssp             EEEEEETTEEEE----------EETTSCEEEEETTTCC--EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred             EEEEEcCCEEEE----------EECCCcEEEEECCCCc--EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence            356666766654          2467889999864332  234456899999999999999999999999999999 566


Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                      ....+.+|...|.++.|     ++..+++|+.||.|++||+.    ....+..+.+|...|.+++|  +++++++|+.||
T Consensus       191 ~~~~~~~h~~~v~~~~~-----~~~~l~s~s~dg~i~~wd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg  259 (445)
T 2ovr_B          191 CIHTLYGHTSTVRCMHL-----HEKRVVSGSRDATLRVWDIE----TGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDF  259 (445)
T ss_dssp             EEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEESS----SCCEEEEEECCSSCEEEEEE--CSSCEEEEETTS
T ss_pred             EEEEECCCCCcEEEEEe-----cCCEEEEEeCCCEEEEEECC----CCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCC
Confidence            77788899999999999     34579999999999999965    34567788899999999999  678899999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG  306 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~  306 (391)
                      .|++||+++                             ..++..+.+|...|.++.| ++..+++++.|+.|++||++++
T Consensus       260 ~i~iwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~  309 (445)
T 2ovr_B          260 MVKVWDPET-----------------------------ETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG  309 (445)
T ss_dssp             CEEEEEGGG-----------------------------TEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC
T ss_pred             EEEEEECCC-----------------------------CcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCC
Confidence            999999976                             3467778899999999999 5678999999999999999999


Q ss_pred             ceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         307 GMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       307 ~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      +.+..+..+. .+.++.+  +++++++|+.||.|++||+++++   ....+.+   |...|++++|++   .++++|+.|
T Consensus       310 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~d  381 (445)
T 2ovr_B          310 NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQ---CLQTLQGPNKHQSAVTCLQFNK---NFVITSSDD  381 (445)
T ss_dssp             CEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC---EEEEECSTTSCSSCEEEEEECS---SEEEEEETT
T ss_pred             CEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCc---EEEEEccCCCCCCCEEEEEECC---CEEEEEeCC
Confidence            9998887765 6666766  47899999999999999998766   5666665   889999999964   689999999


Q ss_pred             CcEEEEecC
Q psy2107         383 NSVKLWDLR  391 (391)
Q Consensus       383 g~v~iwdlr  391 (391)
                      |.|++||++
T Consensus       382 g~v~iwd~~  390 (445)
T 2ovr_B          382 GTVKLWDLK  390 (445)
T ss_dssp             SEEEEEETT
T ss_pred             CeEEEEECC
Confidence            999999974

>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-34  Score=260.07  Aligned_cols=268  Identities=16%  Similarity=0.217  Sum_probs=214.1

Q ss_pred             cccCCCCcEEEEEec--CC-EEEEEECCCeEEEEcC----CCce-------EEeccC----------CCCCeeEEEEEec
Q psy2107         111 DCILHDDWVSAIDFH--ND-WILTGCYDHSVHIWTR----RGEH-------KLNIPG----------HGGPVKGVAWLYN  166 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~----~~~~-------~~~~~~----------~~~~v~~l~~~~~  166 (391)
                      ....|.+.|++++|+  ++ +|++|+.||.|++|++    ....       ...+..          |.+.|.+++|   
T Consensus        40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---  116 (425)
T 1r5m_A           40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW---  116 (425)
T ss_dssp             EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE---
T ss_pred             eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE---
Confidence            334577899999998  56 9999999999999999    5443       333333          6789999999   


Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                      ++++.+|++|+.||.|++||.     ....+..+.+|...|.+++|+|++++|++++.||.|++||+++++.........
T Consensus       117 s~~~~~l~~~~~dg~i~i~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~  191 (425)
T 1r5m_A          117 SHDGNSIVTGVENGELRLWNK-----TGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE  191 (425)
T ss_dssp             CTTSSEEEEEETTSCEEEEET-----TSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred             cCCCCEEEEEeCCCeEEEEeC-----CCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence            778999999999999999992     335677888999999999999999999999999999999998766433221111


Q ss_pred             CC---------------------------CccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeE
Q psy2107         247 DE---------------------------GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTL  298 (391)
Q Consensus       247 ~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i  298 (391)
                      ..                           ...........++......+..+..|...|.+++|++++ .+++++.|+.|
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i  271 (425)
T 1r5m_A          192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL  271 (425)
T ss_dssp             --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred             cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence            10                           001111122233445556777888999999999999655 69999999999


Q ss_pred             EEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         299 KIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      ++||+++++....+..+ ..+.+++|+|++ ++++++.|+.|++||++..+   ....+..|...|.+++|+| ++.+|+
T Consensus       272 ~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~i~~~~~s~-~~~~l~  346 (425)
T 1r5m_A          272 RIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNT---LLALSIVDGVPIFAGRISQ-DGQKYA  346 (425)
T ss_dssp             EEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTE---EEEEEECTTCCEEEEEECT-TSSEEE
T ss_pred             EEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCc---EeEecccCCccEEEEEEcC-CCCEEE
Confidence            99999999988888755 489999999999 99999999999999998765   6777888999999999999 667899


Q ss_pred             EeeCCCcEEEEecC
Q psy2107         378 SASFDNSVKLWDLR  391 (391)
Q Consensus       378 s~~~dg~v~iwdlr  391 (391)
                      +++.||.|++||++
T Consensus       347 ~~~~dg~i~i~~~~  360 (425)
T 1r5m_A          347 VAFMDGQVNVYDLK  360 (425)
T ss_dssp             EEETTSCEEEEECH
T ss_pred             EEECCCeEEEEECC
Confidence            99999999999973

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=4e-35  Score=281.97  Aligned_cols=250  Identities=18%  Similarity=0.296  Sum_probs=206.3

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC---CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR---GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      .+.+|.+.|++++|+  ++++++|+.||.|+|||+.   ......+.+|.++|++++|+|. .++.+|++|+.||.|++|
T Consensus         4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~~~l~s~s~Dg~I~vw   82 (753)
T 3jro_A            4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHP-KFGTILASCSYDGKVLIW   82 (753)
T ss_dssp             ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCT-TSCSEEEEEETTSCEEEE
T ss_pred             ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCC-CCCCEEEEEeCCCeEEEE
Confidence            356899999999998  6799999999999999984   3455678899999999999431 238899999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      |+.  ......+..+.+|...|.+++|+|+  ++++++|+.||.|++||++++..                         
T Consensus        83 d~~--~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~-------------------------  135 (753)
T 3jro_A           83 KEE--NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-------------------------  135 (753)
T ss_dssp             EEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC-------------------------
T ss_pred             ECC--CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC-------------------------
Confidence            976  3444577888899999999999999  99999999999999999987432                         


Q ss_pred             CCCceeeecCccCcccEEEecc--------------CCeEEEEECCCeEEEEecccCc----eeEEEECC-eeeEEEEEC
Q psy2107         264 SRTPLITLKGHKEAISAVQWTA--------------VDEIITSSWDHTLKIWDAELGG----MKSEIVGN-KSFFDVHYS  324 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~--------------~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~-~~i~~~~~~  324 (391)
                        .....+.+|...|.+++|+|              +..+++|+.||.|++||++++.    ....+..| .+|.+++|+
T Consensus       136 --~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s  213 (753)
T 3jro_A          136 --TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS  213 (753)
T ss_dssp             --CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred             --cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence              23456678999999999997              4569999999999999998873    44555554 489999999


Q ss_pred             CC---CCEEEEeeCCCcEEEEcCCCCCcce--EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         325 PL---SKLVITASADKQIRLYDPKVKEGAI--VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       325 p~---~~~l~~g~~dg~i~iwd~~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+   +++|++|+.||.|++||++......  .......|...|++++|+| ++.++++++.||.|++||++
T Consensus       214 p~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~  284 (753)
T 3jro_A          214 PTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKEN  284 (753)
T ss_dssp             CCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCC
T ss_pred             cCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecC
Confidence            99   8999999999999999998753221  2223446889999999999 56679999999999999974

>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3e-36  Score=270.92  Aligned_cols=280  Identities=18%  Similarity=0.273  Sum_probs=224.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccC--CCCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTP--TPSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHI  140 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~i  140 (391)
                      ....|.++++++++          .+.++.+.+|......  ......+.+|...|++++|+   +++|++++.||.|++
T Consensus        71 ~~~~~s~~~~~l~~----------~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  140 (416)
T 2pm9_A           71 NDLDWSHNNKIIAG----------ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI  140 (416)
T ss_dssp             EEEEECSSSSCEEE----------EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB
T ss_pred             EEEEECCCCCeEEE----------EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE
Confidence            45688889877765          2346788998776522  12344566799999999998   569999999999999


Q ss_pred             EcCCCce-------EE---eccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC------
Q psy2107         141 WTRRGEH-------KL---NIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH------  203 (391)
Q Consensus       141 wd~~~~~-------~~---~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------  203 (391)
                      ||+....       ..   ....|...|.+++|   +++ +.++++++.||.|++||++    ....+..+..|      
T Consensus       141 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~dg~v~iwd~~----~~~~~~~~~~~~~~~~~  213 (416)
T 2pm9_A          141 WDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW---NQSLAHVFASAGSSNFASIWDLK----AKKEVIHLSYTSPNSGI  213 (416)
T ss_dssp             CBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE---CSSCTTEEEEESSSSCEEEEETT----TTEEEEEECCCCCSSCC
T ss_pred             EECCCCccccccccccccccccCCCCCeeEEEe---CCCCCcEEEEEcCCCCEEEEECC----CCCcceEEecccccccc
Confidence            9994432       22   34679999999999   556 6799999999999999965    33556666665      


Q ss_pred             CCCeEEEEEcCCC-CEEEEEeCCC---cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcc
Q psy2107         204 ERGLETVTVSESR-QQFATGGWDC---LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAI  278 (391)
Q Consensus       204 ~~~v~~l~~~~~~-~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v  278 (391)
                      ...|.+++|+|++ .++++++.|+   .|++||++++.                            .+...+. +|...|
T Consensus       214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~----------------------------~~~~~~~~~~~~~v  265 (416)
T 2pm9_A          214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN----------------------------TPLQTLNQGHQKGI  265 (416)
T ss_dssp             CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT----------------------------SCSBCCCSCCSSCE
T ss_pred             CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC----------------------------CCcEEeecCccCce
Confidence            7899999999997 6899999998   99999997632                            2455566 899999


Q ss_pred             cEEEecc-C-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC-CEEEEeeCCCcEEEEcCCCCCcceEE-
Q psy2107         279 SAVQWTA-V-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS-KLVITASADKQIRLYDPKVKEGAIVK-  353 (391)
Q Consensus       279 ~~~~~~~-~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~-~~l~~g~~dg~i~iwd~~~~~~~~~~-  353 (391)
                      .+++|+| + ..|++++.|+.|++||+++++.+..+..+. .+.+++|+|++ .+|++++.|+.|++||+......... 
T Consensus       266 ~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~  345 (416)
T 2pm9_A          266 LSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQ  345 (416)
T ss_dssp             EEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-
T ss_pred             eEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccc
Confidence            9999996 4 459999999999999999999999988765 89999999998 89999999999999999765421110 


Q ss_pred             -------------------------------EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         354 -------------------------------STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       354 -------------------------------~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                                     .....|..++++++|+| ++++|++++.||.|+|||+.
T Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~la~~~~d~~v~~w~~~  413 (416)
T 2pm9_A          346 ETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAF-GGKLVQITPDGKGVSITNPK  413 (416)
T ss_dssp             ---------------------CCSCCCSSCCCCCSTTCCCSCCCEEET-TTEEECBCTTSSCBCCBCCC
T ss_pred             cccccccCCcccccccccccccccccccccccCCccccCCccceEEee-CCeEEEEeCCCCeEEEEEec
Confidence                                           00111677888999999 77899999999999999973

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=4.8e-35  Score=265.67  Aligned_cols=242  Identities=16%  Similarity=0.346  Sum_probs=195.5

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc------------eEEeccCCC------------CCeeEEEEEec
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE------------HKLNIPGHG------------GPVKGVAWLYN  166 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~------------~~~~~~~~~------------~~v~~l~~~~~  166 (391)
                      ..|.+.|++++|+  +++||+|+.||.|+|||+...            ....+.+|.            ..|.+++|   
T Consensus        25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~---  101 (447)
T 3dw8_B           25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW---  101 (447)
T ss_dssp             CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE---
T ss_pred             ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE---
Confidence            4578999999998  679999999999999998543            366778998            88999999   


Q ss_pred             CCCC--eEEEEEeCCCcEEEEeecCCCCc-----------------------------------eeEEEE-EecCCCCeE
Q psy2107         167 DGKD--AAFISVSTDQTAMIWEWKVESNS-----------------------------------IECIHV-CRGHERGLE  208 (391)
Q Consensus       167 ~~~~--~~l~s~~~dg~v~iwd~~~~~~~-----------------------------------~~~~~~-~~~~~~~v~  208 (391)
                      ++++  .+|++++.||.|++||+......                                   ..+... ..+|...|.
T Consensus       102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  181 (447)
T 3dw8_B          102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN  181 (447)
T ss_dssp             CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred             cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence            5555  78999999999999997531110                                   011122 357999999


Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee-------eecCccCcccEE
Q psy2107         209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI-------TLKGHKEAISAV  281 (391)
Q Consensus       209 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~  281 (391)
                      +++|+|++++|++| .||.|++||+++...                            .+.       .+.+|...|.++
T Consensus       182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~----------------------------~~~~~~~~~~~~~~~~~~v~~~  232 (447)
T 3dw8_B          182 SISINSDYETYLSA-DDLRINLWHLEITDR----------------------------SFNIVDIKPANMEELTEVITAA  232 (447)
T ss_dssp             EEEECTTSSEEEEE-CSSEEEEEETTEEEE----------------------------EEEEEECCCSSGGGCCCCEEEE
T ss_pred             EEEEcCCCCEEEEe-CCCeEEEEECCCCCc----------------------------eeeeeecccccccccCcceEEE
Confidence            99999999999998 799999999974221                            111       356899999999


Q ss_pred             EeccCC--eEEEEECCCeEEEEecccCce----eEEEECCe-------------eeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         282 QWTAVD--EIITSSWDHTLKIWDAELGGM----KSEIVGNK-------------SFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       282 ~~~~~~--~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~-------------~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                      +|+|++  .|++++.||.|++||+++++.    ...+..+.             .+.+++|+|++++|++++. +.|++|
T Consensus       233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw  311 (447)
T 3dw8_B          233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW  311 (447)
T ss_dssp             EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred             EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence            999764  799999999999999999886    67777765             7999999999999999998 999999


Q ss_pred             cCCC-CCcceEEEEeccccCc---------------EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         343 DPKV-KEGAIVKSTFSSHKEW---------------VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       343 d~~~-~~~~~~~~~~~~h~~~---------------v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++. ..   ++..+.+|...               +..++|+| ++.+|++|+.||.|++||++
T Consensus       312 d~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~~l~s~s~dg~v~iwd~~  372 (447)
T 3dw8_B          312 DLNMENR---PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDSVVMTGSYNNFFRMFDRN  372 (447)
T ss_dssp             ETTCCSS---CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSSEEEEECSTTEEEEEETT
T ss_pred             eCCCCcc---ccceeeccccccccccccccccccccceEEEECC-CCCEEEEeccCCEEEEEEcC
Confidence            9986 44   45566667532               33499999 66789999999999999974

>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}

Probab=100.00  E-value=1.9e-36  Score=268.81  Aligned_cols=244  Identities=16%  Similarity=0.203  Sum_probs=194.9

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      |.++|++++|+  +++|++|+.||.|++||+..   .....+.+|...|.+++|   ++++.+|++++.||.|++||+..
T Consensus        10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~s~d~~v~vwd~~~   86 (377)
T 3dwl_C           10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDW---APKSNRIVTCSQDRNAYVYEKRP   86 (377)
T ss_dssp             CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEE---CTTTCCEEEEETTSSEEEC----
T ss_pred             CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEE---eCCCCEEEEEeCCCeEEEEEcCC
Confidence            66789999998  67999999999999999954   456678899999999999   77889999999999999999753


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      .. .......+.+|...|.+++|+|++++|++|+.|+.|++||+++++.                          .....
T Consensus        87 ~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--------------------------~~~~~  139 (377)
T 3dwl_C           87 DG-TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQEND--------------------------WWVSK  139 (377)
T ss_dssp             ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-------------------------------CCCCE
T ss_pred             CC-ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCccc--------------------------ceeee
Confidence            22 1345667788999999999999999999999999999999976432                          12355


Q ss_pred             eecC-ccCcccEEEeccCC-eEEEEECCCeEEEEecc------------------cCceeEEEECCeeeEEEEECCCCCE
Q psy2107         270 TLKG-HKEAISAVQWTAVD-EIITSSWDHTLKIWDAE------------------LGGMKSEIVGNKSFFDVHYSPLSKL  329 (391)
Q Consensus       270 ~~~~-~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~------------------~~~~~~~~~~~~~i~~~~~~p~~~~  329 (391)
                      .+.. |...|.+++|+|++ .|++++.|+.|++||+.                  .++++..+.+...|.+++|+|++++
T Consensus       140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~  219 (377)
T 3dwl_C          140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA  219 (377)
T ss_dssp             EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred             EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence            6666 99999999999655 69999999999999985                  3445555534458999999999999


Q ss_pred             EEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         330 VITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |++|+.||.|++||++..... ..+..+.+|...|++++|+| ++.+|++++.|+.+ +|+.
T Consensus       220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~-~~~~  279 (377)
T 3dwl_C          220 LAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN-ESAIVAAGYNYSPI-LLQG  279 (377)
T ss_dssp             EEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE-TTEEEEEESSSSEE-EECC
T ss_pred             EEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC-CCCEEEEEcCCcEE-EEEe
Confidence            999999999999999876632 12567788999999999999 66788888766555 6654

>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1

Probab=100.00  E-value=3.6e-34  Score=258.92  Aligned_cols=232  Identities=25%  Similarity=0.461  Sum_probs=204.2

Q ss_pred             cCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         113 ILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       113 ~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      .+|...|+|++++++++++|+.||.|++||+ +++....+.+|.+.|.+++|     ++.++++|+.||.|++||+.   
T Consensus       130 ~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~---  201 (435)
T 1p22_A          130 SETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVN---  201 (435)
T ss_dssp             CSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESS---
T ss_pred             cCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECC---
Confidence            3577889999999999999999999999999 56777788999999999998     56799999999999999965   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       ..+.+..+.+|...|.+++|++  .++++|+.||.|++||++++..                          ......+
T Consensus       202 -~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~--------------------------~~~~~~~  252 (435)
T 1p22_A          202 -TGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTD--------------------------ITLRRVL  252 (435)
T ss_dssp             -SCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSC--------------------------CEEEEEE
T ss_pred             -CCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCC--------------------------ceeeeEe
Confidence             3457788889999999999974  5899999999999999976432                          1123567


Q ss_pred             cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc
Q psy2107         272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA  350 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~  350 (391)
                      .+|...|.+++| .+..+++|+.||.|++||+++++.+..+..+. .+.++++  +++++++|+.||.|++||++++.  
T Consensus       253 ~~~~~~v~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~--  327 (435)
T 1p22_A          253 VGHRAAVNVVDF-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGA--  327 (435)
T ss_dssp             CCCSSCEEEEEE-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCC--
T ss_pred             cCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCC--
Confidence            789999999999 56789999999999999999999999998765 7888888  47899999999999999998876  


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .+..+.+|...|.+++|   ++.+|++|+.||.|++||+
T Consensus       328 -~~~~~~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~  363 (435)
T 1p22_A          328 -CLRVLEGHEELVRCIRF---DNKRIVSGAYDGKIKVWDL  363 (435)
T ss_dssp             -EEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEEH
T ss_pred             -EEEEEeCCcCcEEEEEe---cCCEEEEEeCCCcEEEEEC
Confidence             77888999999999999   3468999999999999996

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=2e-34  Score=280.86  Aligned_cols=242  Identities=22%  Similarity=0.359  Sum_probs=214.1

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      .+.+|.+.|++++|+  +.+|++|+.||.|+|||+ ++.....+..|..+|.+++|   ++++.+|++|+.||.|++||+
T Consensus         8 ~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~   84 (814)
T 3mkq_A            8 TFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKF---IARKNWIIVGSDDFRIRVFNY   84 (814)
T ss_dssp             EEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE---EGGGTEEEEEETTSEEEEEET
T ss_pred             eeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEE---eCCCCEEEEEeCCCeEEEEEC
Confidence            345799999999998  669999999999999998 56677788899999999999   557889999999999999996


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      .    ....+..+.+|...|.+++|+|++++|++|+.||.|++||++++.                            ..
T Consensus        85 ~----~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----------------------------~~  132 (814)
T 3mkq_A           85 N----TGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----------------------------AL  132 (814)
T ss_dssp             T----TCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----------------------------EE
T ss_pred             C----CCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----------------------------eE
Confidence            5    345677888999999999999999999999999999999997532                            35


Q ss_pred             eeeecCccCcccEEEecc-CC-eEEEEECCCeEEEEecccCceeEEEECC--eeeEEEEECC--CCCEEEEeeCCCcEEE
Q psy2107         268 LITLKGHKEAISAVQWTA-VD-EIITSSWDHTLKIWDAELGGMKSEIVGN--KSFFDVHYSP--LSKLVITASADKQIRL  341 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~-~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p--~~~~l~~g~~dg~i~i  341 (391)
                      ...+.+|...|.+++|+| ++ .+++++.||.|++||+.++.....+..+  ..+.+++|+|  ++.+|++|+.||.|++
T Consensus       133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~  212 (814)
T 3mkq_A          133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI  212 (814)
T ss_dssp             EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEE
T ss_pred             EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEE
Confidence            567788999999999997 44 6999999999999999988887777654  5899999999  8999999999999999


Q ss_pred             EcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       342 wd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ||++.+.   ....+.+|...|++++|+| ++.++++++.||.|++||++
T Consensus       213 ~d~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vwd~~  258 (814)
T 3mkq_A          213 WDYQTKS---CVATLEGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSS  258 (814)
T ss_dssp             EETTTTE---EEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETT
T ss_pred             EECCCCc---EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence            9998765   6778889999999999999 66789999999999999974

>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*

Probab=100.00  E-value=1.1e-33  Score=258.01  Aligned_cols=259  Identities=24%  Similarity=0.377  Sum_probs=213.8

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      +.++.+.+|......  ....+.+|.+.|++++|+ +..+++|+.||+|++||+ ++.....+.+|...|.+++|.+ .+
T Consensus       139 s~dg~i~vwd~~~~~--~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~  215 (464)
T 3v7d_B          139 ADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE-YK  215 (464)
T ss_dssp             ETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEE-SS
T ss_pred             cCCCcEEEEECCCCc--EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEec-CC
Confidence            467889999764322  233455799999999998 449999999999999999 5667778889999999999987 35


Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCcee-------------------EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIE-------------------CIHVCRGHERGLETVTVSESRQQFATGGWDCLLK  229 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~  229 (391)
                      ++.++++|+.||.|++||++.......                   .+..+.+|...|.++  +++++++++|+.||.|+
T Consensus       216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~  293 (464)
T 3v7d_B          216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI  293 (464)
T ss_dssp             SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE
T ss_pred             CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE
Confidence            788999999999999999764322111                   356778899998887  56788999999999999


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCce
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGM  308 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~  308 (391)
                      +||+++                             ..++..+.+|...|.+++|+++ ..+++|+.||.|++||+++++.
T Consensus       294 vwd~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~  344 (464)
T 3v7d_B          294 VWDVAQ-----------------------------MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGEL  344 (464)
T ss_dssp             EEETTT-----------------------------TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred             EEECCC-----------------------------CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcE
Confidence            999976                             3467778899999999999965 5699999999999999999999


Q ss_pred             eEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         309 KSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       309 ~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      +..+..+. .+.+++|+  +++|++|+.||.|++||++...   ..... .|...+..++|+| ++.++++++ ||.|++
T Consensus       345 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~---~~~~~-~~~~~~~~~~~~~-~~~~l~~~~-dg~i~i  416 (464)
T 3v7d_B          345 MYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS---RKFSY-HHTNLSAITTFYV-SDNILVSGS-ENQFNI  416 (464)
T ss_dssp             EEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---EEEEE-ECTTCCCEEEEEE-CSSEEEEEE-TTEEEE
T ss_pred             EEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCc---eeeee-cCCCCccEEEEEe-CCCEEEEec-CCeEEE
Confidence            99998765 88999997  5899999999999999998755   32232 3667788899999 667888888 899999


Q ss_pred             EecC
Q psy2107         388 WDLR  391 (391)
Q Consensus       388 wdlr  391 (391)
                      ||++
T Consensus       417 wd~~  420 (464)
T 3v7d_B          417 YNLR  420 (464)
T ss_dssp             EETT
T ss_pred             EECC
Confidence            9974

>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A

Probab=100.00  E-value=6.7e-35  Score=262.59  Aligned_cols=235  Identities=14%  Similarity=0.151  Sum_probs=191.8

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .+++++|+  +++|++++.||.|++||....... .+..| ..+....|   ++++.+|++|+.||.|++||+.    ..
T Consensus        58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~---~~~~~~l~~~~~dg~i~iwd~~----~~  129 (420)
T 3vl1_A           58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTA---KLQMRRFILGTTEGDIKVLDSN----FN  129 (420)
T ss_dssp             CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEE---CSSSCEEEEEETTSCEEEECTT----SC
T ss_pred             cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEE---ecCCCEEEEEECCCCEEEEeCC----Cc
Confidence            34466776  779999999999999999554433 33334 33444455   6688999999999999999954    34


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      .....+.+|...|.+++|+|++++|++|+.||.|++||++++                             ..+..+.+|
T Consensus       130 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-----------------------------~~~~~~~~h  180 (420)
T 3vl1_A          130 LQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG-----------------------------SNPRTLIGH  180 (420)
T ss_dssp             EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-----------------------------CCCEEEECC
T ss_pred             ceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC-----------------------------cCceEEcCC
Confidence            566677799999999999999999999999999999999763                             356678899


Q ss_pred             cCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC-------------------------eeeEEEEECCCCC
Q psy2107         275 KEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN-------------------------KSFFDVHYSPLSK  328 (391)
Q Consensus       275 ~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------------~~i~~~~~~p~~~  328 (391)
                      ...|.+++|+|++ .|++++.|+.|++||+++++.+..+..+                         ..+.+++|+|+++
T Consensus       181 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~  260 (420)
T 3vl1_A          181 RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK  260 (420)
T ss_dssp             SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE
T ss_pred             CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC
Confidence            9999999999654 6999999999999999999998888642                         2344455689999


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|++|+.||.|++||++...  .......+|...|++++|+|++..+|++|+.||.|++||++
T Consensus       261 ~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~  321 (420)
T 3vl1_A          261 YVIAGHVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR  321 (420)
T ss_dssp             EEEEEETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred             EEEEEcCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence            99999999999999998755  23334456889999999999555599999999999999985

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=1.4e-34  Score=253.24  Aligned_cols=246  Identities=15%  Similarity=0.166  Sum_probs=195.4

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce----EEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEe
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH----KLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWE  186 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd  186 (391)
                      +|.+.|++++|+  +++|++++.||.|++|++....    ...+..|...|.+++|+|   ++. +|++|+.||.|++||
T Consensus         9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~l~~~~~dg~i~~wd   85 (342)
T 1yfq_A            9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID---NTDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE---SSSEEEEEEETTSCEEEEC
T ss_pred             CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC---CCCcEEEEEcCCCeEEEEE
Confidence            699999999998  6799999999999999984433    556668999999999955   688 999999999999999


Q ss_pred             e-cCCCCceeEEEEEec--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         187 W-KVESNSIECIHVCRG--HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       187 ~-~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      + .  ...   ...+.+  |...|.+++|+| +++|++++.|+.|++||+++......                    ..
T Consensus        86 ~~~--~~~---~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~--------------------~~  139 (342)
T 1yfq_A           86 LIG--SPS---FQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVI--------------------AV  139 (342)
T ss_dssp             SSS--SSS---EEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCE--------------------EE
T ss_pred             ecc--CCc---eEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccc--------------------cc
Confidence            6 4  222   266778  999999999999 99999999999999999864100000                    00


Q ss_pred             CCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEeccc-Ccee-E-EE-ECCeeeEEEEECC-CCCEEEEeeCCCc
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAEL-GGMK-S-EI-VGNKSFFDVHYSP-LSKLVITASADKQ  338 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~-~~~~-~-~~-~~~~~i~~~~~~p-~~~~l~~g~~dg~  338 (391)
                      ...++..+. |...|.+++|++++ +++++.|+.|++||+++ +... . .. .....+.+++|+| +++++++|+.||.
T Consensus       140 ~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~  217 (342)
T 1yfq_A          140 KNLNSNNTK-VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR  217 (342)
T ss_dssp             EESCSSSSS-SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred             cCCeeeEEe-eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc
Confidence            011233333 78899999999866 99999999999999998 5532 2 22 2345899999999 9999999999999


Q ss_pred             EEEEcCCCCCc---ceEEEEeccccC---------cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEG---AIVKSTFSSHKE---------WVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~---~~~~~~~~~h~~---------~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++|+++....   ......+..|..         .|++++|+| ++.+|++++.||.|++||++
T Consensus       218 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vwd~~  281 (342)
T 1yfq_A          218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQ  281 (342)
T ss_dssp             EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred             EEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEEcCc
Confidence            99999977500   114455666654         999999999 56679999999999999974

>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A

Probab=100.00  E-value=8.7e-34  Score=243.01  Aligned_cols=211  Identities=20%  Similarity=0.356  Sum_probs=176.2

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCC
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDC  226 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg  226 (391)
                      ..+.+|.+.|++++|   ++++++|++|+.|++|++||+.  ......+..+.+|.+.|.+++|+++  +++|++|+.||
T Consensus         3 ~~~~~h~~~V~~~~~---s~~g~~las~s~D~~v~iw~~~--~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~   77 (297)
T 2pm7_B            3 VIANAHNEMIHDAVM---DYYGKRMATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG   77 (297)
T ss_dssp             EECCSCSSCEEEEEE---CTTSSEEEEEETTSCEEEEEBC--SSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT
T ss_pred             eeccCCcCceEEEEE---CCCCCEEEEEeCCCEEEEEecC--CCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC
Confidence            456789999999999   7889999999999999999964  2334567788999999999999863  89999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEec
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDA  303 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~  303 (391)
                      .|++||+++++.                           ..+..+.+|...|.+++|+|+   ..|++++.|+.|++||+
T Consensus        78 ~v~iWd~~~~~~---------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~  130 (297)
T 2pm7_B           78 KVMIWKEENGRW---------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEF  130 (297)
T ss_dssp             EEEEEEBSSSCB---------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEB
T ss_pred             EEEEEEcCCCce---------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEe
Confidence            999999976331                           245567789999999999964   57999999999999999


Q ss_pred             ccCce--eEEEECCe-eeEEEEECCC-------------CCEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEE
Q psy2107         304 ELGGM--KSEIVGNK-SFFDVHYSPL-------------SKLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       304 ~~~~~--~~~~~~~~-~i~~~~~~p~-------------~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~  366 (391)
                      +++..  ...+..|. .+.+++|+|+             +++|++|+.|+.|++||++.... ..+...+.+|...|.++
T Consensus       131 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v  210 (297)
T 2pm7_B          131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV  210 (297)
T ss_dssp             CSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred             cCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence            87632  34455444 8999999997             57999999999999999876442 22456788999999999


Q ss_pred             EECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         367 RWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       367 ~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+|++  +.+|+|++.|++|+|||++
T Consensus       211 ~~sp~~~~~~~las~s~D~~v~iWd~~  237 (297)
T 2pm7_B          211 AWSPTVLLRSYMASVSQDRTCIIWTQD  237 (297)
T ss_dssp             EECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             EECCCCCCceEEEEEECCCcEEEEEeC
Confidence            999954  5789999999999999974

>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}

Probab=100.00  E-value=7.9e-35  Score=256.17  Aligned_cols=248  Identities=13%  Similarity=0.223  Sum_probs=195.9

Q ss_pred             cCCCCcEEEEEecC--C-EEEEEEC---CCeEEEEcCCCceE--EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         113 ILHDDWVSAIDFHN--D-WILTGCY---DHSVHIWTRRGEHK--LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       113 ~~h~~~V~~~~~~~--~-~l~t~~~---dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      .+|.+.|++++|++  . ++++|+.   ||.|++||+.....  ....+|...|.+++|+|..+++.+|++|+.||.|++
T Consensus        15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i   94 (357)
T 3i2n_A           15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI   94 (357)
T ss_dssp             EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred             cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence            46999999999983  3 5566666   99999999954433  233478999999999543323789999999999999


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEE------cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTV------SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~------~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      ||+....   ..+..+.+|...|.+++|      +|++++|++|+.||.|++||++++..                    
T Consensus        95 wd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~--------------------  151 (357)
T 3i2n_A           95 WNLEAPE---MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDD--------------------  151 (357)
T ss_dssp             ECTTSCS---SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSS--------------------
T ss_pred             EeCCCCC---ccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCC--------------------
Confidence            9965322   245677899999999955      67899999999999999999976431                    


Q ss_pred             cccCCCCCceeeecCccC----cccEEE----ecc-CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECC---C
Q psy2107         259 YSSASSRTPLITLKGHKE----AISAVQ----WTA-VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP---L  326 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~----~v~~~~----~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p---~  326 (391)
                              +...+..|..    .+.+++    |++ +..+++++.|+.|++||+++++......+...+.+++|+|   +
T Consensus       152 --------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~  223 (357)
T 3i2n_A          152 --------PVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDIS  223 (357)
T ss_dssp             --------CSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSS
T ss_pred             --------cceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCC
Confidence                    3444544433    788888    554 4568999999999999999999887777788999999999   9


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceE--EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIV--KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|++|+.||.|++||++.......  ...+.+|...|++++|+|++..+|++++.||.|++||++
T Consensus       224 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~  290 (357)
T 3i2n_A          224 MNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE  290 (357)
T ss_dssp             CCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred             CCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence            99999999999999999876432211  224458999999999999554489999999999999973

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=100.00  E-value=1e-33  Score=253.66  Aligned_cols=295  Identities=16%  Similarity=0.204  Sum_probs=223.4

Q ss_pred             ceeeEEe-CCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcc-----------cCCCCcEEEEEecC---CEEE
Q psy2107          66 IQFDFLI-AGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDC-----------ILHDDWVSAIDFHN---DWIL  130 (391)
Q Consensus        66 ~~~~f~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~V~~~~~~~---~~l~  130 (391)
                      ...+|.+ +++++++          .+.++.+.+|.............           .+|...|++++|++   .+++
T Consensus        47 ~~~~~s~~~~~~l~~----------~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~  116 (408)
T 4a11_B           47 NTLDIEPVEGRYMLS----------GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT  116 (408)
T ss_dssp             EEEEECTTTCCEEEE----------EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred             EEEEEecCCCCEEEE----------EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence            4568888 8887765          23578899998765443322221           25999999999973   5899


Q ss_pred             EEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEE
Q psy2107         131 TGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV  210 (391)
Q Consensus       131 t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l  210 (391)
                      +++.||.|++||+..........+...+.++.|.|.++++.++++++.||.|++||++    ....+..+.+|...|.++
T Consensus       117 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~----~~~~~~~~~~~~~~v~~~  192 (408)
T 4a11_B          117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK----SGSCSHILQGHRQEILAV  192 (408)
T ss_dssp             EEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS----SSCCCEEECCCCSCEEEE
T ss_pred             EEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC----CcceeeeecCCCCcEEEE
Confidence            9999999999999665555555588899999998876677899999999999999965    234566778899999999


Q ss_pred             EEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e
Q psy2107         211 TVSESRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E  288 (391)
Q Consensus       211 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~  288 (391)
                      +|+|+++ +|++|+.||.|++||+++..........             ...............|...|.+++|+|++ .
T Consensus       193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  259 (408)
T 4a11_B          193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ-------------HNGKKSQAVESANTAHNGKVNGLCFTSDGLH  259 (408)
T ss_dssp             EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCT-------------TTTCSCCCTTTSSCSCSSCEEEEEECTTSSE
T ss_pred             EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccc-------------cccccceeeccccccccCceeEEEEcCCCCE
Confidence            9999998 5899999999999999875421100000             00001112233446789999999999665 5


Q ss_pred             EEEEECCCeEEEEecccCceeEEEECC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc
Q psy2107         289 IITSSWDHTLKIWDAELGGMKSEIVGN------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~~~~~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                      +++++.||.|++||+.+++.......+      ..+........+..+++++.++.|++||+.++.   .+..+.+|...
T Consensus       260 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~---~~~~~~~~~~~  336 (408)
T 4a11_B          260 LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE---QITMLKGHYKT  336 (408)
T ss_dssp             EEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC---EEEEECCCSSC
T ss_pred             EEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc---ceeeeccCCCe
Confidence            999999999999999988765544322      122222223345566677789999999998876   77888999999


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++++|+| ++.+|++++.||.|++||++
T Consensus       337 v~~~~~s~-~~~~l~s~~~dg~i~iw~~~  364 (408)
T 4a11_B          337 VDCCVFQS-NFQELYSGSRDCNILAWVPS  364 (408)
T ss_dssp             EEEEEEET-TTTEEEEEETTSCEEEEEEC
T ss_pred             EEEEEEcC-CCCEEEEECCCCeEEEEeCC
Confidence            99999999 66789999999999999974

>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.5e-34  Score=246.13  Aligned_cols=236  Identities=18%  Similarity=0.293  Sum_probs=201.3

Q ss_pred             cccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         111 DCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .+.+|.+.|++++|. +++|++|+.||.|++||+. +.....+..|...|.+++|   ++++.++++|+.||.|++|++.
T Consensus        13 ~l~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~~~dg~i~~~~~~   89 (313)
T 3odt_A           13 TLKGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCY---DSEKELLLFGGKDTMINGVPLF   89 (313)
T ss_dssp             EECCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEE---ETTTTEEEEEETTSCEEEEETT
T ss_pred             HhhCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEE---CCCCCEEEEecCCCeEEEEEee
Confidence            456799999999996 7799999999999999994 4556677889999999999   5678899999999999999975


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                      .. .....+..+.+|...|.+++|  +++++++++.||.|++||.                               ....
T Consensus        90 ~~-~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-------------------------------~~~~  135 (313)
T 3odt_A           90 AT-SGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-------------------------------GSLV  135 (313)
T ss_dssp             CC-TTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-------------------------------TEEE
T ss_pred             ec-CCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-------------------------------CcEE
Confidence            32 233556778899999999999  5679999999999999993                               2366


Q ss_pred             eeecCccCcccEEEecc--CCeEEEEECCCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         269 ITLKGHKEAISAVQWTA--VDEIITSSWDHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      ..+..|...+.++.|.+  +..+++++.|+.|++||  .++....+..  ...+.+++|+|++. +++++.||.|++||+
T Consensus       136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~  212 (313)
T 3odt_A          136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDM  212 (313)
T ss_dssp             EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEET
T ss_pred             EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEEC
Confidence            77888999999999985  56799999999999999  4455556654  45899999999988 889999999999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..+   .+..+.+|...|++++|+|++ . |++++.||.|++||++
T Consensus       213 ~~~~---~~~~~~~~~~~i~~~~~~~~~-~-l~~~~~dg~v~iwd~~  254 (313)
T 3odt_A          213 HTGD---VLRTYEGHESFVYCIKLLPNG-D-IVSCGEDRTVRIWSKE  254 (313)
T ss_dssp             TTCC---EEEEEECCSSCEEEEEECTTS-C-EEEEETTSEEEEECTT
T ss_pred             Cchh---hhhhhhcCCceEEEEEEecCC-C-EEEEecCCEEEEEECC
Confidence            8776   777888999999999999944 4 8999999999999974

>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A

Probab=100.00  E-value=7.3e-35  Score=251.92  Aligned_cols=256  Identities=20%  Similarity=0.316  Sum_probs=193.0

Q ss_pred             HHHHHhccCCCCCCCCCceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec---
Q psy2107          49 LINEILKEDSNEDNYKDIQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH---  125 (391)
Q Consensus        49 ~~~~ll~~~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~---  125 (391)
                      +++..+..+....    ....|.++|+.+++          .+.++.+++|............+.+|.+.|++++|+   
T Consensus         4 ~~~~~~~~H~~~V----~~v~~s~~g~~las----------gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~   69 (316)
T 3bg1_A            4 VINTVDTSHEDMI----HDAQMDYYGTRLAT----------CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM   69 (316)
T ss_dssp             ----------CCE----EEEEECGGGCEEEE----------EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG
T ss_pred             eeeeecccccCeE----EEeeEcCCCCEEEE----------EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC
Confidence            4455555554433    44688899988776          346889999987643221234566899999999995   


Q ss_pred             -CCEEEEEECCCeEEEEcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         126 -NDWILTGCYDHSVHIWTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       126 -~~~l~t~~~dg~i~iwd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                       +++|++|+.|++|++||+..   .....+.+|...|.+++|+|. .++.+|++|+.||+|++||++... .......+.
T Consensus        70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~-~~g~~lasgs~D~~i~lwd~~~~~-~~~~~~~~~  147 (316)
T 3bg1_A           70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH-DYGLILACGSSDGAISLLTYTGEG-QWEVKKINN  147 (316)
T ss_dssp             GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT-TTCSCEEEECSSSCEEEEEECSSS-CEEECCBTT
T ss_pred             CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC-CCCcEEEEEcCCCCEEEEecCCCC-Ccceeeeec
Confidence             57999999999999999954   355677899999999999542 237799999999999999976321 223345567


Q ss_pred             cCCCCeEEEEEcCC-----------------CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         202 GHERGLETVTVSES-----------------RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       202 ~~~~~v~~l~~~~~-----------------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +|...|.+++|+|+                 +++|++|+.|+.|++||++....                          
T Consensus       148 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~--------------------------  201 (316)
T 3bg1_A          148 AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ--------------------------  201 (316)
T ss_dssp             SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC--------------------------
T ss_pred             cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc--------------------------
Confidence            89999999999997                 46899999999999999964211                          


Q ss_pred             CCceeeecCccCcccEEEeccC-----CeEEEEECCCeEEEEecccCc----eeEEE-ECCeeeEEEEECCCCCEEEEee
Q psy2107         265 RTPLITLKGHKEAISAVQWTAV-----DEIITSSWDHTLKIWDAELGG----MKSEI-VGNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~-----~~l~s~~~dg~i~iwd~~~~~----~~~~~-~~~~~i~~~~~~p~~~~l~~g~  334 (391)
                      ..+...+.+|...|.+++|+|+     ..|++++.|++|++||+.+..    ....+ .+...|.+++|+|++++|++|+
T Consensus       202 ~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~  281 (316)
T 3bg1_A          202 WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSG  281 (316)
T ss_dssp             EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred             cceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEc
Confidence            1245677899999999999976     469999999999999997631    11222 3455899999999999999999


Q ss_pred             CCCcEEEEcCCC
Q psy2107         335 ADKQIRLYDPKV  346 (391)
Q Consensus       335 ~dg~i~iwd~~~  346 (391)
                      .|+.|++|+...
T Consensus       282 ~D~~v~lw~~~~  293 (316)
T 3bg1_A          282 GDNKVTLWKESV  293 (316)
T ss_dssp             SSSCEEEEEECT
T ss_pred             CCCeEEEEEECC
Confidence            999999999754

>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*

Probab=100.00  E-value=3.8e-33  Score=253.06  Aligned_cols=252  Identities=20%  Similarity=0.376  Sum_probs=216.8

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCC
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGK  169 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~  169 (391)
                      +.++.+.+|.......  ...+.+|...|.+++++++.+++|+.||.|++||+ ++.....+.+|...|.+++|     +
T Consensus       176 ~~dg~i~vwd~~~~~~--~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-----~  248 (445)
T 2ovr_B          176 STDRTLKVWNAETGEC--IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----D  248 (445)
T ss_dssp             ETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-----C
T ss_pred             eCCCeEEEEECCcCcE--EEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-----C
Confidence            4577888887643221  23455799999999999999999999999999999 56777788899999999999     5


Q ss_pred             CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107         170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG  249 (391)
Q Consensus       170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~  249 (391)
                      +.++++|+.||.|++||++    ....+..+.+|...|.+++|  ++.++++|+.||.|++||+++              
T Consensus       249 ~~~l~~~~~dg~i~iwd~~----~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~--------------  308 (445)
T 2ovr_B          249 GRRVVSGAYDFMVKVWDPE----TETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET--------------  308 (445)
T ss_dssp             SSCEEEEETTSCEEEEEGG----GTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT--------------
T ss_pred             CCEEEEEcCCCEEEEEECC----CCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC--------------
Confidence            6789999999999999965    44678888899999999999  788999999999999999976              


Q ss_pred             ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC----CeeeEEEEECC
Q psy2107         250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYSP  325 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~i~~~~~~p  325 (391)
                                     ...+..+.+|...+.++.++ ++.+++++.||.|++||+++++.+..+..    ...+.+++|+ 
T Consensus       309 ---------------~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-  371 (445)
T 2ovr_B          309 ---------------GNCIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-  371 (445)
T ss_dssp             ---------------CCEEEEECCCCSCEEEEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC-
T ss_pred             ---------------CCEEEEEcCCcccEEEEEEe-CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC-
Confidence                           34667788899999999886 46899999999999999999999999874    3489999996 


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEEEEe-----ccccCcEEEEEECCCCCCEEEEeeCCCc----EEEEecC
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNS----VKLWDLR  391 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~----v~iwdlr  391 (391)
                       +++|++|+.||.|++||+.+++   .+..+     .+|.+.|++++|+| ++.++++|+.||+    |.|||++
T Consensus       372 -~~~l~s~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df~  441 (445)
T 2ovr_B          372 -KNFVITSSDDGTVKLWDLKTGE---FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD  441 (445)
T ss_dssp             -SSEEEEEETTSEEEEEETTTCC---EEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred             -CCEEEEEeCCCeEEEEECCCCc---eeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEECC
Confidence             6899999999999999998876   55555     47889999999999 7778999999998    9999974

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.4e-33  Score=247.56  Aligned_cols=268  Identities=17%  Similarity=0.246  Sum_probs=199.8

Q ss_pred             CcccCCCCcEEEEEecC-----CEEEEEECCCeEEEEcCC--CceE-EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc
Q psy2107         110 LDCILHDDWVSAIDFHN-----DWILTGCYDHSVHIWTRR--GEHK-LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT  181 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~~-----~~l~t~~~dg~i~iwd~~--~~~~-~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~  181 (391)
                      ..+.+|.+.|++++|++     ++|++|+.||.|++||+.  +..+ ..+.+|...|.+++|   ++++.+|++++.||.
T Consensus        33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~l~s~~~dg~  109 (368)
T 3mmy_A           33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCW---SDDGSKVFTASCDKT  109 (368)
T ss_dssp             ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSE
T ss_pred             EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEE---CcCCCEEEEEcCCCc
Confidence            34567999999999983     699999999999999995  4444 577889999999999   778999999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCc---------
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTV--SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGT---------  250 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~---------  250 (391)
                      |++||++  ..  ..+ .+..|...|.+++|  +|++++|++++.||.|++||+++++.............         
T Consensus       110 v~iwd~~--~~--~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (368)
T 3mmy_A          110 AKMWDLS--SN--QAI-QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAV  184 (368)
T ss_dssp             EEEEETT--TT--EEE-EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEE
T ss_pred             EEEEEcC--CC--Cce-eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeE
Confidence            9999965  22  333 35679999999999  89999999999999999999988665432211110000         


Q ss_pred             -cccccccccccCCCC-Cceeee-cCccCcccEEEecc-CC----eEEEEECCCeEEEEecccC---ceeEEEECCe---
Q psy2107         251 -TSKKRKKEYSSASSR-TPLITL-KGHKEAISAVQWTA-VD----EIITSSWDHTLKIWDAELG---GMKSEIVGNK---  316 (391)
Q Consensus       251 -~~~~~~~~~~~~~~~-~~~~~~-~~~~~~v~~~~~~~-~~----~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~---  316 (391)
                       .........++.... ...... ..+...+.++.+.+ ..    .+++++.||.|++||++..   .....+..+.   
T Consensus       185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~  264 (368)
T 3mmy_A          185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNG  264 (368)
T ss_dssp             EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC-
T ss_pred             EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccc
Confidence             000000111111111 111111 12233445555542 11    2999999999999999987   5677777776   


Q ss_pred             ----------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         317 ----------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       317 ----------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                                ++.+++|+|++++|++|+.||.|++||+++++   ++..+.+|...|++++|+| ++.+|++++.|+..+
T Consensus       265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~  340 (368)
T 3mmy_A          265 TNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDART---KLKTSEQLDQPISACCFNH-NGNIFAYASSYDWSK  340 (368)
T ss_dssp             ---CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEEECCCCSSCEEEEEECT-TSSCEEEEECCCSTT
T ss_pred             ccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCc---EEEEecCCCCCceEEEECC-CCCeEEEEecccccc
Confidence                      49999999999999999999999999998765   7788899999999999999 666799999888655


Q ss_pred             EEe
Q psy2107         387 LWD  389 (391)
Q Consensus       387 iwd  389 (391)
                      .|+
T Consensus       341 ~~~  343 (368)
T 3mmy_A          341 GHE  343 (368)
T ss_dssp             CGG
T ss_pred             ccc
Confidence            554

>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A

Probab=100.00  E-value=1.9e-34  Score=254.57  Aligned_cols=243  Identities=15%  Similarity=0.285  Sum_probs=199.9

Q ss_pred             CCCCcEEEEEecC------CEEEEEECCCeEEEEcCC-CceEEecc-----CCCCCeeEEEEEecCCC-CeEEEEEeCCC
Q psy2107         114 LHDDWVSAIDFHN------DWILTGCYDHSVHIWTRR-GEHKLNIP-----GHGGPVKGVAWLYNDGK-DAAFISVSTDQ  180 (391)
Q Consensus       114 ~h~~~V~~~~~~~------~~l~t~~~dg~i~iwd~~-~~~~~~~~-----~~~~~v~~l~~~~~~~~-~~~l~s~~~dg  180 (391)
                      +|.+.|++++|++      ..+++++.++.|++||+. +..+..+.     .|...|.+++|+|.... +.+|++|+.||
T Consensus        16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg   95 (366)
T 3k26_A           16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG   95 (366)
T ss_dssp             TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred             CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence            6999999999983      367777778899999995 44444333     36788999999875322 78999999999


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      .|++||+.    ..+.+..+.+|...|.+++|+| ++++|++|+.||.|++||+++++                      
T Consensus        96 ~i~v~d~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~----------------------  149 (366)
T 3k26_A           96 IIRIINPI----TMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT----------------------  149 (366)
T ss_dssp             EEEEECTT----TCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE----------------------
T ss_pred             EEEEEEch----hceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe----------------------
Confidence            99999964    3466778889999999999999 99999999999999999997633                      


Q ss_pred             ccCCCCCceeee---cCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE----------------------
Q psy2107         260 SSASSRTPLITL---KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV----------------------  313 (391)
Q Consensus       260 ~~~~~~~~~~~~---~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~----------------------  313 (391)
                             ....+   ..|...|.+++|++++ .+++++.||.|++||+++++....+.                      
T Consensus       150 -------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (366)
T 3k26_A          150 -------LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP  222 (366)
T ss_dssp             -------EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred             -------EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccC
Confidence                   44444   6899999999999654 69999999999999998776543332                      


Q ss_pred             -------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-----------ceEEEEeccccCcEEEEEECCCC-CC
Q psy2107         314 -------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-----------AIVKSTFSSHKEWVQSVRWSPID-PQ  374 (391)
Q Consensus       314 -------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~-~~  374 (391)
                             +...|.+++|+  ++++++++.|+.|++||++....           ......+..|...|++++|+|+. +.
T Consensus       223 ~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~  300 (366)
T 3k26_A          223 DFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK  300 (366)
T ss_dssp             SEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS
T ss_pred             ccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc
Confidence                   44589999998  78999999999999999876532           13567788899999999999941 78


Q ss_pred             EEEEeeCCCcEEEEecC
Q psy2107         375 LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdlr  391 (391)
                      +|++++.||.|++||++
T Consensus       301 ~l~~~~~dg~i~vwd~~  317 (366)
T 3k26_A          301 MLALGNQVGKLYVWDLE  317 (366)
T ss_dssp             EEEEECTTSCEEEEECC
T ss_pred             EEEEEecCCcEEEEECC
Confidence            99999999999999984

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=4.1e-33  Score=283.20  Aligned_cols=241  Identities=23%  Similarity=0.413  Sum_probs=211.4

Q ss_pred             CcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         110 LDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       110 ~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..+.+|.+.|++++|+  ++++++|+.||+|++||. ++..+..+.+|.+.|.+++|   ++++.++++|+.||.|++||
T Consensus       609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~---s~~~~~l~s~~~d~~v~vwd  685 (1249)
T 3sfz_A          609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF---SSDDSYIATCSADKKVKIWD  685 (1249)
T ss_dssp             EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEE
T ss_pred             EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEE---ecCCCEEEEEeCCCeEEEEE
Confidence            4456899999999998  679999999999999999 66778889999999999999   77899999999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +.    ....+..+.+|...|.+++|+|  ++.++++|+.||.|++||+++                             
T Consensus       686 ~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----------------------------  732 (1249)
T 3sfz_A          686 SA----TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----------------------------  732 (1249)
T ss_dssp             TT----TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----------------------------
T ss_pred             CC----CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----------------------------
Confidence            65    3467888899999999999999  566899999999999999976                             


Q ss_pred             CCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE------------------------------
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV------------------------------  313 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------  313 (391)
                      ......+.+|...|.+++|+|++ .+++++.||.|++||+.++.....+.                              
T Consensus       733 ~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~  812 (1249)
T 3sfz_A          733 KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK  812 (1249)
T ss_dssp             SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred             cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence            34677788999999999999654 69999999999999998776544432                              


Q ss_pred             --------------------------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         314 --------------------------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       314 --------------------------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                                                +...+.+++|+|+++++++|+.||.|++||+.++.   ....+.+|...|++++
T Consensus       813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~h~~~v~~v~  889 (1249)
T 3sfz_A          813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRL---KVADCRGHLSWVHGVM  889 (1249)
T ss_dssp             EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTE---EEEEECCCSSCEEEEE
T ss_pred             EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eeeecCCCccceEEEE
Confidence                                      12367889999999999999999999999998765   6778899999999999


Q ss_pred             ECCCCCCEEEEeeCCCcEEEEec
Q psy2107         368 WSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       368 ~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+| ++.+|++++.||.|++||+
T Consensus       890 ~sp-dg~~l~s~s~dg~v~vw~~  911 (1249)
T 3sfz_A          890 FSP-DGSSFLTASDDQTIRVWET  911 (1249)
T ss_dssp             ECT-TSSEEEEEETTSCEEEEEH
T ss_pred             ECC-CCCEEEEEeCCCeEEEEEc
Confidence            999 6678999999999999985

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=1.4e-33  Score=252.43  Aligned_cols=260  Identities=18%  Similarity=0.223  Sum_probs=205.4

Q ss_pred             CccceEEEEEEeccCC--CCCCcccCCCCcEEEEEec---CCEEEEEECCCeEEEEcCCC--------ceEEeccCCCCC
Q psy2107          91 SSENVIDVEYLESTPT--PSPLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIWTRRG--------EHKLNIPGHGGP  157 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~--~~~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iwd~~~--------~~~~~~~~~~~~  157 (391)
                      +.++.+.+|.......  .....+.+|.+.|++++|+   +++|++|+.||+|+|||+..        ..+..+.+|...
T Consensus        54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~  133 (402)
T 2aq5_A           54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR  133 (402)
T ss_dssp             SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred             cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence            4678899997643211  2334566899999999997   46999999999999999943        456778899999


Q ss_pred             eeEEEEEecCCCC-eEEEEEeCCCcEEEEeecCCCCceeEEEEE--ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         158 VKGVAWLYNDGKD-AAFISVSTDQTAMIWEWKVESNSIECIHVC--RGHERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       158 v~~l~~~~~~~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      |.+++|   ++++ .+|++|+.||.|++||++    ....+..+  .+|...|.+++|+|++++|++++.||.|++||++
T Consensus       134 v~~~~~---~p~~~~~l~s~~~dg~i~iwd~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~  206 (402)
T 2aq5_A          134 VGIVAW---HPTAQNVLLSAGCDNVILVWDVG----TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR  206 (402)
T ss_dssp             EEEEEE---CSSBTTEEEEEETTSCEEEEETT----TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred             EEEEEE---CcCCCCEEEEEcCCCEEEEEECC----CCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence            999999   6666 699999999999999965    34667777  7899999999999999999999999999999997


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCccCc-ccEEEeccCCeE-EEE---ECCCeEEEEecccCce
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHKEA-ISAVQWTAVDEI-ITS---SWDHTLKIWDAELGGM  308 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~l-~s~---~~dg~i~iwd~~~~~~  308 (391)
                      ++                             ..+..+ ..|... +.++.|++++.+ ++|   +.|+.|++||++++..
T Consensus       207 ~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~  257 (402)
T 2aq5_A          207 KG-----------------------------TVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE  257 (402)
T ss_dssp             TT-----------------------------EEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred             CC-----------------------------ceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence            63                             345556 677765 899999987774 455   4899999999998764


Q ss_pred             -eEEE--ECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         309 -KSEI--VGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       309 -~~~~--~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                       ....  .+...+.+++|+|++++|+ +|+.||.|++||+...+. ...+..+. |...|.+++|+| ++.++++  .|+
T Consensus       258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp-~~~~~~s--~~~  333 (402)
T 2aq5_A          258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMP-KRGLEVN--KCE  333 (402)
T ss_dssp             CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECC-GGGSCGG--GTE
T ss_pred             CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEec-cccccee--cce
Confidence             3333  3456899999999999886 455799999999987652 11222232 668999999999 5555553  567


Q ss_pred             cEEEEec
Q psy2107         384 SVKLWDL  390 (391)
Q Consensus       384 ~v~iwdl  390 (391)
                      .+++|++
T Consensus       334 ~~~~~~l  340 (402)
T 2aq5_A          334 IARFYKL  340 (402)
T ss_dssp             EEEEEEE
T ss_pred             eEEEEEc
Confidence            9999986

>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}

Probab=100.00  E-value=1.8e-33  Score=255.34  Aligned_cols=276  Identities=14%  Similarity=0.255  Sum_probs=209.8

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC---------CCCcccCCC------------CcEEEEEe
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP---------SPLDCILHD------------DWVSAIDF  124 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~h~------------~~V~~~~~  124 (391)
                      ...+|.++|+++++          .+.++.+.+|........         ....+.+|.            +.|++++|
T Consensus        32 ~~v~~s~~g~~la~----------g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~  101 (447)
T 3dw8_B           32 STVEFNHSGELLAT----------GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW  101 (447)
T ss_dssp             EEEEECSSSSEEEE----------EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred             EEEEECCCCCEEEE----------EcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence            44688999988875          235788999987644310         123455788            88999999


Q ss_pred             c--C--CEEEEEECCCeEEEEcCCCceE-----------------------------------------EeccCCCCCee
Q psy2107         125 H--N--DWILTGCYDHSVHIWTRRGEHK-----------------------------------------LNIPGHGGPVK  159 (391)
Q Consensus       125 ~--~--~~l~t~~~dg~i~iwd~~~~~~-----------------------------------------~~~~~~~~~v~  159 (391)
                      +  +  ..|++++.||+|++||+.....                                         ....+|...|.
T Consensus       102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~  181 (447)
T 3dw8_B          102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHIN  181 (447)
T ss_dssp             CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCC
T ss_pred             cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceE
Confidence            8  3  5899999999999999843222                                         11367999999


Q ss_pred             EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE-------EEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEE
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH-------VCRGHERGLETVTVSESR-QQFATGGWDCLLKIW  231 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iw  231 (391)
                      +++|   ++++.+|++| .||.|++||++.   ....+.       .+.+|...|.+++|+|++ ++|++|+.||.|++|
T Consensus       182 ~~~~---~~~~~~l~s~-~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw  254 (447)
T 3dw8_B          182 SISI---NSDYETYLSA-DDLRINLWHLEI---TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC  254 (447)
T ss_dssp             EEEE---CTTSSEEEEE-CSSEEEEEETTE---EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred             EEEE---cCCCCEEEEe-CCCeEEEEECCC---CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence            9999   7788999998 799999999642   122333       245799999999999998 999999999999999


Q ss_pred             ECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC------------cccEEEeccCCe-EEEEECCCeE
Q psy2107         232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE------------AISAVQWTAVDE-IITSSWDHTL  298 (391)
Q Consensus       232 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~~~~~~~-l~s~~~dg~i  298 (391)
                      |+++++...                         .....+..|..            .|.+++|+|++. |++++. +.|
T Consensus       255 d~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v  308 (447)
T 3dw8_B          255 DMRASALCD-------------------------RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV  308 (447)
T ss_dssp             ETTTCSSSC-------------------------TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE
T ss_pred             ECcCCcccc-------------------------ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE
Confidence            998755311                         12344555554            999999997665 777777 999


Q ss_pred             EEEeccc-CceeEEEECCeee----------------EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec----
Q psy2107         299 KIWDAEL-GGMKSEIVGNKSF----------------FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS----  357 (391)
Q Consensus       299 ~iwd~~~-~~~~~~~~~~~~i----------------~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----  357 (391)
                      ++||+++ ++++..+..+..+                ..++|+|++++|++|+.||.|++||+.+++   .. .+.    
T Consensus       309 ~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~---~~-~~~~~~~  384 (447)
T 3dw8_B          309 KVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKR---DI-TLEASRE  384 (447)
T ss_dssp             EEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCC---EE-EEECCST
T ss_pred             EEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCc---ce-eeeeccc
Confidence            9999997 8888888877643                349999999999999999999999998765   22 111    


Q ss_pred             -----------------------------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         358 -----------------------------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       358 -----------------------------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                                                   .+...|.+++|+| ++.+||+++.++ +++|.-
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p-~~~~la~~~~~~-~~~~~~  444 (447)
T 3dw8_B          385 NNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHP-KENIIAVATTNN-LYIFQD  444 (447)
T ss_dssp             TCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECS-SSSEEEEECSSC-EEEEEC
T ss_pred             ccccccccCCccccccCCcccccccccccccCCceeEEEECC-CCCEEEEEecce-eeeecc
Confidence                                         2345789999999 667888888765 788864

>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}

Probab=100.00  E-value=4.3e-34  Score=253.58  Aligned_cols=220  Identities=24%  Similarity=0.376  Sum_probs=184.2

Q ss_pred             EEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107         140 IWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ  218 (391)
Q Consensus       140 iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  218 (391)
                      .|+. +......+.+|.+.|++++|   +|++.+|++|+.||+|++||+.    .......+..|...|.+++|+|++++
T Consensus        50 ~~~~~~~~~~~~l~gH~~~V~~~~~---sp~~~~l~s~s~D~~v~iWd~~----~~~~~~~~~~h~~~v~~~~~s~~g~~  122 (380)
T 3iz6_a           50 SFNPTDLVCCRTLQGHSGKVYSLDW---TPEKNWIVSASQDGRLIVWNAL----TSQKTHAIKLHCPWVMECAFAPNGQS  122 (380)
T ss_dssp             CCCCCCCEEEEEECCCSSCEEEEEE---CTTSSCEEEEETTSEEEEEETT----TTEEEEEEECCCTTCCCCEECTTSSE
T ss_pred             ccccceeEEeecccccccEEEEEEE---cCCCCEEEEEeCCCeEEEEECC----CCccceEEecCCCCEEEEEECCCCCE
Confidence            3554 34455678899999999999   7788999999999999999954    34667888999999999999999999


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--CeEEEEECCC
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--DEIITSSWDH  296 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~l~s~~~dg  296 (391)
                      |++|+.|+.+++||+.+.....                      ........+.+|...|.++.|.|.  ..|++|+.|+
T Consensus       123 las~~~d~~v~iw~~~~~~~~~----------------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~  180 (380)
T 3iz6_a          123 VACGGLDSACSIFNLSSQADRD----------------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQ  180 (380)
T ss_dssp             EEECCSSSCCEEEECCCCSSCC----------------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTS
T ss_pred             EEEeeCCCcEEEEECCCCcccc----------------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCC
Confidence            9999999999999997533210                      112244567899999999999964  4599999999


Q ss_pred             eEEEEecccCceeEEEE-----CC-eeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107         297 TLKIWDAELGGMKSEIV-----GN-KSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~-----~~-~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~  369 (391)
                      +|++||+.+++.+..+.     .| ..+.+++|+| ++++|++|+.|+.|++||++...  .....+.+|...|++++|+
T Consensus       181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~--~~~~~~~~h~~~v~~v~~~  258 (380)
T 3iz6_a          181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS--RAVRTYHGHEGDINSVKFF  258 (380)
T ss_dssp             CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC--CCCEEECCCSSCCCEEEEC
T ss_pred             cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC--cceEEECCcCCCeEEEEEe
Confidence            99999999999888773     33 3799999977 78999999999999999997432  2556788999999999999


Q ss_pred             CCCCCEEEEeeCCCcEEEEecC
Q psy2107         370 PIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      | ++.+|+||+.||+|++||++
T Consensus       259 p-~~~~l~s~s~D~~i~lwd~~  279 (380)
T 3iz6_a          259 P-DGQRFGTGSDDGTCRLFDMR  279 (380)
T ss_dssp             T-TSSEEEEECSSSCEEEEETT
T ss_pred             c-CCCeEEEEcCCCeEEEEECC
Confidence            9 66789999999999999985

>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.7e-34  Score=259.13  Aligned_cols=241  Identities=14%  Similarity=0.194  Sum_probs=191.2

Q ss_pred             cCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCC----c---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcE
Q psy2107         113 ILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRG----E---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTA  182 (391)
Q Consensus       113 ~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~----~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v  182 (391)
                      .+|.+.|++++|++   ++|++|+.||+|+|||+..    .   ....+ .|...|.+++|   ++++.+|++|+.||.|
T Consensus        60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~---~~~~~~l~s~s~dg~i  135 (437)
T 3gre_A           60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITM---IPNFDAFAVSSKDGQI  135 (437)
T ss_dssp             TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEE---CTTSSEEEEEETTSEE
T ss_pred             cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEE---eCCCCEEEEEeCCCEE
Confidence            46999999999975   5999999999999999832    2   12222 59999999999   6788999999999999


Q ss_pred             EEEeecCC-CCce------eEEEEEe--c--CCCCeEEEE--EcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107         183 MIWEWKVE-SNSI------ECIHVCR--G--HERGLETVT--VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG  249 (391)
Q Consensus       183 ~iwd~~~~-~~~~------~~~~~~~--~--~~~~v~~l~--~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~  249 (391)
                      ++||++.. ....      ..+..+.  .  +...+.++.  +++++.+|++|+.||.|++||+++              
T Consensus       136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~--------------  201 (437)
T 3gre_A          136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT--------------  201 (437)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT--------------
T ss_pred             EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC--------------
Confidence            99997411 1111      1122222  1  456677777  568899999999999999999976              


Q ss_pred             ccccccccccccCCCCCceeeecC--ccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEE--CCeeeEEEEEC
Q psy2107         250 TTSKKRKKEYSSASSRTPLITLKG--HKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYS  324 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~  324 (391)
                                     ..++..+.+  |...|.+++|+|++ .|++|+.||.|++||+++++++..+.  ++.+|.+++|+
T Consensus       202 ---------------~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~  266 (437)
T 3gre_A          202 ---------------LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVC  266 (437)
T ss_dssp             ---------------CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEEC
T ss_pred             ---------------CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEec
Confidence                           345667776  88999999999655 58999999999999999999988874  45589999665


Q ss_pred             ----CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc--------------------------ccCcEEEEEECCCCCC
Q psy2107         325 ----PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS--------------------------HKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       325 ----p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v~~~~~~~~~~~  374 (391)
                          |++.+|++|+.||.|++||+++++   ....+.+                          |...|++++|++ + .
T Consensus       267 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~-~  341 (437)
T 3gre_A          267 QFYGKNSVIVVGGSSKTFLTIWNFVKGH---CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVSN-D-K  341 (437)
T ss_dssp             TTTCTTEEEEEEESTTEEEEEEETTTTE---EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEET-T-E
T ss_pred             cccCCCccEEEEEcCCCcEEEEEcCCCc---EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEECC-c-e
Confidence                467799999999999999998765   3333332                          666788899983 4 6


Q ss_pred             EEEEeeCCCcEEEEecC
Q psy2107         375 LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdlr  391 (391)
                      +|++|+.||.|++||++
T Consensus       342 ~l~s~~~d~~i~~wd~~  358 (437)
T 3gre_A          342 ILLTDEATSSIVMFSLN  358 (437)
T ss_dssp             EEEEEGGGTEEEEEETT
T ss_pred             EEEecCCCCeEEEEECC
Confidence            89999999999999974

>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A

Probab=100.00  E-value=6.4e-33  Score=270.24  Aligned_cols=275  Identities=21%  Similarity=0.360  Sum_probs=229.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.+++..+++.          ..++.+.+|......  ....+.+|...|++++|+  +++|++|+.||.|++||+
T Consensus        17 ~~i~~sp~~~~la~~----------~~~g~v~iwd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~   84 (814)
T 3mkq_A           17 KGIDFHPTEPWVLTT----------LYSGRVEIWNYETQV--EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY   84 (814)
T ss_dssp             EEEEECSSSSEEEEE----------ETTSEEEEEETTTTE--EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred             EEEEECCCCCEEEEE----------eCCCEEEEEECCCCc--eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence            557899999887752          346788898754322  123455799999999998  679999999999999998


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFAT  221 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s  221 (391)
                       ++..+..+.+|.+.|++++|   ++++.+|++++.||.|++||+..   .......+.+|...|.+++|+| +++.|++
T Consensus        85 ~~~~~~~~~~~~~~~v~~~~~---s~~~~~l~~~~~dg~i~vw~~~~---~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~  158 (814)
T 3mkq_A           85 NTGEKVVDFEAHPDYIRSIAV---HPTKPYVLSGSDDLTVKLWNWEN---NWALEQTFEGHEHFVMCVAFNPKDPSTFAS  158 (814)
T ss_dssp             TTCCEEEEEECCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEGGG---TSEEEEEEECCSSCEEEEEEETTEEEEEEE
T ss_pred             CCCcEEEEEecCCCCEEEEEE---eCCCCEEEEEcCCCEEEEEECCC---CceEEEEEcCCCCcEEEEEEEcCCCCEEEE
Confidence             66777788899999999999   77888999999999999999752   2356677889999999999999 8899999


Q ss_pred             EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEecc--CC-eEEEEECCCe
Q psy2107         222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTA--VD-EIITSSWDHT  297 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~--~~-~l~s~~~dg~  297 (391)
                      ++.||.|++||+.++.                             ....+.. +...+.+++|++  ++ .+++++.||.
T Consensus       159 ~~~dg~v~vwd~~~~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~  209 (814)
T 3mkq_A          159 GCLDRTVKVWSLGQST-----------------------------PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT  209 (814)
T ss_dssp             EETTSEEEEEETTCSS-----------------------------CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE
T ss_pred             EeCCCeEEEEECCCCc-----------------------------ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE
Confidence            9999999999997633                             3334443 448899999996  44 6999999999


Q ss_pred             EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      |++||+.+++.+..+..+. .+.+++|+|+++++++|+.||.|++||+.+..   ....+..|...|.+++|+|++..++
T Consensus       210 i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~  286 (814)
T 3mkq_A          210 IKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK---VEKTLNVGLERSWCIATHPTGRKNY  286 (814)
T ss_dssp             EEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS---EEEEECCSSSSEEEEEECTTCGGGE
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc---EEEEeecCCCcEEEEEEccCCCceE
Confidence            9999999999999888664 89999999999999999999999999998766   7778888999999999999665544


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      ++++.|+.+.+|++
T Consensus       287 ~~~~~~~~~~~~~~  300 (814)
T 3mkq_A          287 IASGFDNGFTVLSL  300 (814)
T ss_dssp             EEEEETTEEEEEEC
T ss_pred             EEEEeCCCEEEEEc
Confidence            55555778888875

>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*

Probab=100.00  E-value=8.1e-33  Score=281.07  Aligned_cols=308  Identities=20%  Similarity=0.324  Sum_probs=235.1

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.++|+++++          .+.++.+.+|.......  ...+.+|.+.|++++|+  ++++++|+.||+|++||+
T Consensus       619 ~~~~~s~~~~~l~s----------~~~d~~i~vw~~~~~~~--~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~  686 (1249)
T 3sfz_A          619 YHACFSQDGQRIAS----------CGADKTLQVFKAETGEK--LLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS  686 (1249)
T ss_dssp             EEEEECTTSSEEEE----------EETTSCEEEEETTTCCE--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred             EEEEECCCCCEEEE----------EeCCCeEEEEECCCCCE--EEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence            34578888887765          24678899997654332  34456899999999998  669999999999999999


Q ss_pred             -CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE
Q psy2107         144 -RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG  222 (391)
Q Consensus       144 -~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg  222 (391)
                       ++..+..+.+|...|.+++|+|. .++.++++|+.||.|++||++    ...++..+.+|...|.+++|+|++++|++|
T Consensus       687 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~sg~~d~~v~vwd~~----~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~  761 (1249)
T 3sfz_A          687 ATGKLVHTYDEHSEQVNCCHFTNK-SNHLLLATGSNDFFLKLWDLN----QKECRNTMFGHTNSVNHCRFSPDDELLASC  761 (1249)
T ss_dssp             TTCCEEEEEECCSSCEEEEEECSS-SSCCEEEEEETTSCEEEEETT----SSSEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred             CCCceEEEEcCCCCcEEEEEEecC-CCceEEEEEeCCCeEEEEECC----CcchhheecCCCCCEEEEEEecCCCEEEEE
Confidence             67778888999999999999552 256689999999999999965    345778888999999999999999999999


Q ss_pred             eCCCcEEEEECCCCCCCCCCC-------------------------CCCCCCccccccccccccCCCCCceeeec-CccC
Q psy2107         223 GWDCLLKIWSADISKERGDPS-------------------------ENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKE  276 (391)
Q Consensus       223 ~~dg~i~iwd~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  276 (391)
                      +.||.|++||++++.......                         +.+.............++.........+. +|..
T Consensus       762 s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~  841 (1249)
T 3sfz_A          762 SADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS  841 (1249)
T ss_dssp             ESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS
T ss_pred             ECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC
Confidence            999999999998764321110                         00000001111111222333333444443 7899


Q ss_pred             cccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-------
Q psy2107         277 AISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVK-------  347 (391)
Q Consensus       277 ~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~-------  347 (391)
                      .|.+++|+|+ ..+++++.|+.|++||+.++.....+..|. .|.+++|+|++++|++++.||.|++|++...       
T Consensus       842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~  921 (1249)
T 3sfz_A          842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIV  921 (1249)
T ss_dssp             CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSS
T ss_pred             ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeec
Confidence            9999999965 458899999999999999999888887765 7889999999999999999998988874310       


Q ss_pred             ---------------------------------------------------------------------CcceEEEEecc
Q psy2107         348 ---------------------------------------------------------------------EGAIVKSTFSS  358 (391)
Q Consensus       348 ---------------------------------------------------------------------~~~~~~~~~~~  358 (391)
                                                                                           ........+.+
T Consensus       922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~ 1001 (1249)
T 3sfz_A          922 LKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG 1001 (1249)
T ss_dssp             EEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC
T ss_pred             ccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc
Confidence                                                                                 00112345567


Q ss_pred             ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       359 h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |...|++++|+| ++.++++++.||.|++||++
T Consensus      1002 h~~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A         1002 HKKAVRHIQFTA-DGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp             CSSCCCCEEECS-SSSCEEEECSSSBEEEEETT
T ss_pred             CCCceEEEEECC-CCCEEEEEcCCCEEEEEECC
Confidence            999999999999 56679999999999999974

>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A

Probab=100.00  E-value=5.7e-33  Score=242.93  Aligned_cols=269  Identities=14%  Similarity=0.124  Sum_probs=219.5

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC-CCCcccCCCCcEEEEEec--CC-EEEEEECCCeEEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP-SPLDCILHDDWVSAIDFH--ND-WILTGCYDHSVHIW  141 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~~~~~--~~-~l~t~~~dg~i~iw  141 (391)
                      ....|.++++++.+          .+.++.+.+|........ ......+|...|++++|+  ++ +|++|+.||.|++|
T Consensus        15 ~~~~~s~~~~~l~~----------~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w   84 (342)
T 1yfq_A           15 SDIKIIPSKSLLLI----------TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV   84 (342)
T ss_dssp             EEEEEEGGGTEEEE----------EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred             EEEEEcCCCCEEEE----------EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence            45688888876654          235788999988754411 134455899999999997  77 99999999999999


Q ss_pred             cC-CCceEEeccC--CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc-----eeEEEEEecCCCCeEEEEEc
Q psy2107         142 TR-RGEHKLNIPG--HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS-----IECIHVCRGHERGLETVTVS  213 (391)
Q Consensus       142 d~-~~~~~~~~~~--~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-----~~~~~~~~~~~~~v~~l~~~  213 (391)
                      |+ .......+.+  |...|.+++|   ++ +.++++++.||.|++||++.....     ..++..+. |...|.+++|+
T Consensus        85 d~~~~~~~~~~~~~~~~~~v~~l~~---~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~  159 (342)
T 1yfq_A           85 DLIGSPSFQALTNNEANLGICRICK---YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTN  159 (342)
T ss_dssp             CSSSSSSEEECBSCCCCSCEEEEEE---ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEEC
T ss_pred             EeccCCceEeccccCCCCceEEEEe---CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEec
Confidence            99 8888888888  9999999999   45 779999999999999997631000     22233333 78899999999


Q ss_pred             CCCCEEEEEeCCCcEEEEECCC-CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-C-CeEE
Q psy2107         214 ESRQQFATGGWDCLLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-V-DEII  290 (391)
Q Consensus       214 ~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~  290 (391)
                      |++  +++++.|+.|++||+++ ...                           ........|...+.+++|+| + ..++
T Consensus       160 ~~~--l~~~~~d~~i~i~d~~~~~~~---------------------------~~~~~~~~~~~~i~~i~~~~~~~~~l~  210 (342)
T 1yfq_A          160 SSR--LIVGMNNSQVQWFRLPLCEDD---------------------------NGTIEESGLKYQIRDVALLPKEQEGYA  210 (342)
T ss_dssp             SSE--EEEEESTTEEEEEESSCCTTC---------------------------CCEEEECSCSSCEEEEEECSGGGCEEE
T ss_pred             CCc--EEEEeCCCeEEEEECCccccc---------------------------cceeeecCCCCceeEEEECCCCCCEEE
Confidence            987  99999999999999975 332                           12334456788999999997 4 5699


Q ss_pred             EEECCCeEEEEecccC------ceeEEEECCe----------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         291 TSSWDHTLKIWDAELG------GMKSEIVGNK----------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       291 s~~~dg~i~iwd~~~~------~~~~~~~~~~----------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      +++.||.|++|++...      +....+..+.          .+.+++|+|++++|++|+.||.|++||+.+++   .+.
T Consensus       211 ~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~---~~~  287 (342)
T 1yfq_A          211 CSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---KIK  287 (342)
T ss_dssp             EEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEE
T ss_pred             EEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHh---Hhh
Confidence            9999999999999887      7777887653          79999999999999999999999999998765   677


Q ss_pred             Eeccc-cCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         355 TFSSH-KEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       355 ~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      .+.+| ...|++++  | ++.+|++++.||.
T Consensus       288 ~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~  315 (342)
T 1yfq_A          288 NFAKFNEDSVVKIA--C-SDNILCLATSDDT  315 (342)
T ss_dssp             ECCCCSSSEEEEEE--E-CSSEEEEEEECTH
T ss_pred             hhhcccCCCceEec--C-CCCeEEEEecCCc
Confidence            88888 99999999  7 6678999999998

>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A

Probab=100.00  E-value=3.2e-33  Score=250.13  Aligned_cols=239  Identities=19%  Similarity=0.293  Sum_probs=193.0

Q ss_pred             EEEEecCCE---EEEEECCCeEEEEcCCC-----ceEEeccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeecCC
Q psy2107         120 SAIDFHNDW---ILTGCYDHSVHIWTRRG-----EHKLNIPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       120 ~~~~~~~~~---l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      ..++++++.   +++++.||.|+||++..     .....+.+|.+.|++++|   ++ ++.+|++|+.||.|++||+...
T Consensus        38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~---~p~~~~~l~s~s~dg~v~vw~~~~~  114 (402)
T 2aq5_A           38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAW---CPHNDNVIASGSEDCTVMVWEIPDG  114 (402)
T ss_dssp             CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEE---CTTCTTEEEEEETTSEEEEEECCTT
T ss_pred             CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEe---CCCCCCEEEEEeCCCeEEEEEccCC
Confidence            356777664   34578899999999843     234456789999999999   66 7889999999999999997633


Q ss_pred             CCc---eeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         191 SNS---IECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       191 ~~~---~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      ...   ...+..+.+|...|.+++|+|++ ++|++|+.||.|++||++++                             .
T Consensus       115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-----------------------------~  165 (402)
T 2aq5_A          115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG-----------------------------A  165 (402)
T ss_dssp             CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT-----------------------------E
T ss_pred             CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC-----------------------------C
Confidence            211   14567788999999999999998 69999999999999999763                             3


Q ss_pred             ceeee--cCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEE-ECCe--eeEEEEECCCCCEEEEe---eCCC
Q psy2107         267 PLITL--KGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEI-VGNK--SFFDVHYSPLSKLVITA---SADK  337 (391)
Q Consensus       267 ~~~~~--~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~--~i~~~~~~p~~~~l~~g---~~dg  337 (391)
                      .+..+  ..|...|.+++|++++ .|++++.|+.|++||+++++.+..+ ..+.  .+.+++|+|++++|++|   +.|+
T Consensus       166 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~  245 (402)
T 2aq5_A          166 AVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER  245 (402)
T ss_dssp             EEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred             ccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence            56666  7899999999999655 5999999999999999999998888 4554  37999999999999999   7899


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .|++||++......... ...|...|.+++|+|++..++++++.||.|++||++
T Consensus       246 ~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~  298 (402)
T 2aq5_A          246 QVALWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEIT  298 (402)
T ss_dssp             EEEEEETTBCSSCSEEE-ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEEC
T ss_pred             eEEEEcCccccCCceEE-eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEec
Confidence            99999998765332222 235778899999999555444566689999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2e-33  Score=274.01  Aligned_cols=303  Identities=15%  Similarity=0.110  Sum_probs=211.6

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ....|.+ |+++.+          .+.++.+++|......   ....+.|.+.|++++|+  ++++++|+.||+|++||+
T Consensus        62 ~~l~fsp-g~~L~S----------~s~D~~v~lWd~~~~~---~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~  127 (902)
T 2oaj_A           62 KEMRFVK-GIYLVV----------INAKDTVYVLSLYSQK---VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDI  127 (902)
T ss_dssp             EEEEEET-TTEEEE----------EETTCEEEEEETTTCS---EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEET
T ss_pred             EEEEEcC-CCEEEE----------EECcCeEEEEECCCCc---EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEEC
Confidence            4468888 665544          3468899999864322   22333477899999998  679999999999999999


Q ss_pred             CCceEE------------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC--------
Q psy2107         144 RGEHKL------------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH--------  203 (391)
Q Consensus       144 ~~~~~~------------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--------  203 (391)
                      ....+.            .+.+|.++|.+++|+|.  ++..+++|+.||.| +||++    ...++..+..|        
T Consensus       128 ~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~--~~~~l~~g~~dg~v-lWd~~----~~~~~~~~~~~~~~g~~~~  200 (902)
T 2oaj_A          128 DRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR--DIGTVLISYEYVTL-TYSLV----ENEIKQSFIYELPPFAPGG  200 (902)
T ss_dssp             TTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT--EEEEEEEECSSCEE-EEETT----TTEEEEEECCCBCTTCCCS
T ss_pred             CCCccccceeccccccccccccCCCCeEEEEEccC--CCCEEEEEeCCCcE-EEECC----CCceEEEEecccCCcCCCc
Confidence            665442            24679999999999553  45789999999999 99965    33555666555        


Q ss_pred             ----------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCC--C-----CC-----------CC---------
Q psy2107         204 ----------ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGD--P-----SE-----------NG---------  246 (391)
Q Consensus       204 ----------~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~-----~~-----------~~---------  246 (391)
                                ...|.+++|+|++++|++|+.||.|++||+++++....  .     ..           ..         
T Consensus       201 ~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~  280 (902)
T 2oaj_A          201 DFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWM  280 (902)
T ss_dssp             TTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEE
T ss_pred             ccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEE
Confidence                      57899999999999999999999999999987654210  0     00           00         


Q ss_pred             ---CC-----Cccc-cc------ccccc----------------------------------------------------
Q psy2107         247 ---DE-----GTTS-KK------RKKEY----------------------------------------------------  259 (391)
Q Consensus       247 ---~~-----~~~~-~~------~~~~~----------------------------------------------------  259 (391)
                         .+     .... ..      ....+                                                    
T Consensus       281 ~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g  360 (902)
T 2oaj_A          281 CENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAG  360 (902)
T ss_dssp             ECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHH
T ss_pred             ecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCC
Confidence               00     0000 00      00000                                                    


Q ss_pred             ------------------ccCCCCCcee-----------------------------------------eecCccCcccE
Q psy2107         260 ------------------SSASSRTPLI-----------------------------------------TLKGHKEAISA  280 (391)
Q Consensus       260 ------------------~~~~~~~~~~-----------------------------------------~~~~~~~~v~~  280 (391)
                                        ++.....+..                                         .+.+|...+.+
T Consensus       361 ~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~s  440 (902)
T 2oaj_A          361 CHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQ  440 (902)
T ss_dssp             TBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCC
T ss_pred             CCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCc
Confidence                              0000000000                                         01222333334


Q ss_pred             EEeccCC-eEEEEECCCeEEEEecccCcee----EEE--------ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         281 VQWTAVD-EIITSSWDHTLKIWDAELGGMK----SEI--------VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       281 ~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~----~~~--------~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      ++|+|++ .|++|+.|++|++||+.++...    ...        .+...|.+++|+|++++||+|+.||+|+|||+...
T Consensus       441 v~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~  520 (902)
T 2oaj_A          441 KLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVN  520 (902)
T ss_dssp             CCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred             ccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence            4455544 5999999999999999887532    111        12348999999999999999999999999998754


Q ss_pred             Cc------------------------------------------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         348 EG------------------------------------------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       348 ~~------------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      +.                                          ..++..+.+|.+.|++++|+| ++ +||+|+.|++|
T Consensus       521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSp-dG-~lAsgs~D~tv  598 (902)
T 2oaj_A          521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSN-IG-FVGIAYAAGSL  598 (902)
T ss_dssp             CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECB-TS-EEEEEETTSEE
T ss_pred             cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecC-Cc-EEEEEeCCCcE
Confidence            21                                          124667888999999999999 55 89999999999


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      +|||++
T Consensus       599 ~lwd~~  604 (902)
T 2oaj_A          599 MLIDRR  604 (902)
T ss_dssp             EEEETT
T ss_pred             EEEECC
Confidence            999974

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2.9e-32  Score=257.22  Aligned_cols=238  Identities=17%  Similarity=0.329  Sum_probs=208.1

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-C----ceEEeccCCCCC-eeEEEEEecCC--CCeEEEEEeCCCcEE
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-G----EHKLNIPGHGGP-VKGVAWLYNDG--KDAAFISVSTDQTAM  183 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~----~~~~~~~~~~~~-v~~l~~~~~~~--~~~~l~s~~~dg~v~  183 (391)
                      .|.+.|++++|+  +++|++++ ++.|++||+. +    .....+.+|... |.+++|   ++  ++.+|++|+.||.|+
T Consensus        16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~---sp~~~~~~l~s~~~dg~v~   91 (615)
T 1pgu_A           16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKF---SPIKGSQYLCSGDESGKVI   91 (615)
T ss_dssp             CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEE---CSSTTCCEEEEEETTSEEE
T ss_pred             CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEE---CcCCCCCEEEEecCCCEEE
Confidence            588999999998  66888888 8899999994 5    578889999999 999999   77  889999999999999


Q ss_pred             EEeecCCCC----ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107         184 IWEWKVESN----SIECIHVCRGHERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKR  255 (391)
Q Consensus       184 iwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  255 (391)
                      +||+.....    ....+..+..|...|.+++|+|++++|++++.+    +.|++||.                      
T Consensus        92 vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~----------------------  149 (615)
T 1pgu_A           92 VWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS----------------------  149 (615)
T ss_dssp             EEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT----------------------
T ss_pred             EEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC----------------------
Confidence            999742100    346677888899999999999999999999988    68888884                      


Q ss_pred             ccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECCe----eeEEEEECCC-CC
Q psy2107         256 KKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGNK----SFFDVHYSPL-SK  328 (391)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~i~~~~~~p~-~~  328 (391)
                               ...+..+.+|...|.+++|+|++  .+++++.|+.|++||+.+++.+..+..+.    .+.+++|+|+ ++
T Consensus       150 ---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  220 (615)
T 1pgu_A          150 ---------GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGE  220 (615)
T ss_dssp             ---------CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCC
T ss_pred             ---------CCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCC
Confidence                     23667788999999999999766  69999999999999999999999888654    5999999999 99


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEEEe-c---cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKSTF-S---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|++++.||.|++||+++++   ....+ .   +|...|.+++|+  ++.+|++++.||.|++||++
T Consensus       221 ~l~~~~~dg~i~vwd~~~~~---~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~  282 (615)
T 1pgu_A          221 FVITVGSDRKISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVT  282 (615)
T ss_dssp             EEEEEETTCCEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETT
T ss_pred             EEEEEeCCCeEEEEECCCCC---EeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECC
Confidence            99999999999999998766   66677 5   899999999999  55689999999999999974

>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.3e-32  Score=266.45  Aligned_cols=248  Identities=14%  Similarity=0.172  Sum_probs=195.0

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      ..+|.+.|++++|+  +++||+|+.||+|+||+..+........|..+|.+++|+   + +.+|++++.|++|++||+. 
T Consensus        13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fs---p-g~~L~S~s~D~~v~lWd~~-   87 (902)
T 2oaj_A           13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFV---K-GIYLVVINAKDTVYVLSLY-   87 (902)
T ss_dssp             EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEE---T-TTEEEEEETTCEEEEEETT-
T ss_pred             ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEc---C-CCEEEEEECcCeEEEEECC-
Confidence            34799999999998  669999999999999999766555555688999999994   4 5689999999999999965 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                         ..+++..+. |...|++++|+|++++|++|+.||.|++||+++++...             ......     .....
T Consensus        88 ---~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~-------------~~i~~~-----~~~~~  145 (902)
T 2oaj_A           88 ---SQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSS-------------FKLDNL-----QKSSF  145 (902)
T ss_dssp             ---TCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEE-------------EEECCH-----HHHHT
T ss_pred             ---CCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCcccc-------------ceeccc-----ccccc
Confidence               234555665 67899999999999999999999999999997643210             000000     00002


Q ss_pred             eecCccCcccEEEeccC--CeEEEEECCCeEEEEecccCceeEEEECC-------------------eeeEEEEECCCCC
Q psy2107         270 TLKGHKEAISAVQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGN-------------------KSFFDVHYSPLSK  328 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------------~~i~~~~~~p~~~  328 (391)
                      .+.+|..+|.+++|+|.  +.+++|+.||.| +||+++++.+..+..+                   ..|.+++|+|+|+
T Consensus       146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~  224 (902)
T 2oaj_A          146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL  224 (902)
T ss_dssp             CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS
T ss_pred             ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC
Confidence            34679999999999975  469999999999 9999999998888765                   5799999999999


Q ss_pred             EEEEeeCCCcEEEEcCCCCCcceEEE--Ee---cc-------------ccCcEEEEEEC----CCCCCEEEEeeCC----
Q psy2107         329 LVITASADKQIRLYDPKVKEGAIVKS--TF---SS-------------HKEWVQSVRWS----PIDPQLFVSASFD----  382 (391)
Q Consensus       329 ~l~~g~~dg~i~iwd~~~~~~~~~~~--~~---~~-------------h~~~v~~~~~~----~~~~~~l~s~~~d----  382 (391)
                      +|++|+.||.|++||+++++   ++.  .+   ..             |...|++++|+    |+++.+|++|+.|    
T Consensus       225 ~lasgs~Dg~i~lWd~~~g~---~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~  301 (902)
T 2oaj_A          225 HIITIHEDNSLVFWDANSGH---MIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGD  301 (902)
T ss_dssp             EEEEEETTCCEEEEETTTCC---EEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSS
T ss_pred             EEEEEECCCeEEEEECCCCc---EEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCC
Confidence            99999999999999998765   332  22   11             35579999995    4334678888776    


Q ss_pred             -CcEEEEec
Q psy2107         383 -NSVKLWDL  390 (391)
Q Consensus       383 -g~v~iwdl  390 (391)
                       ..+.+|++
T Consensus       302 ~~~v~~~~~  310 (902)
T 2oaj_A          302 NQSLTMIDL  310 (902)
T ss_dssp             CCCEEEEEE
T ss_pred             CceEEEEec
Confidence             37888874

>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A

Probab=100.00  E-value=2.9e-32  Score=257.25  Aligned_cols=270  Identities=15%  Similarity=0.187  Sum_probs=226.2

Q ss_pred             ceeeEEe--CCeEehhhHHHHHHHcCCCccceEEEEEEecc------CCCCCCcccCCCCcEEEEEec--CCEEEEEECC
Q psy2107          66 IQFDFLI--AGELLRTSVTSFLESKGISSENVIDVEYLEST------PTPSPLDCILHDDWVSAIDFH--NDWILTGCYD  135 (391)
Q Consensus        66 ~~~~f~~--~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d  135 (391)
                      ....|.+  +++++++          .+.++.+.+|.....      .......+..|...|.+++|+  +++|++++.+
T Consensus        68 ~~~~~sp~~~~~~l~s----------~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~  137 (615)
T 1pgu_A           68 TTVKFSPIKGSQYLCS----------GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEG  137 (615)
T ss_dssp             EEEEECSSTTCCEEEE----------EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEECcCCCCCEEEE----------ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccC
Confidence            4578999  9988775          235788999988533      222234455699999999998  6699999988


Q ss_pred             ----CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC---Ce
Q psy2107         136 ----HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHER---GL  207 (391)
Q Consensus       136 ----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~---~v  207 (391)
                          +.|++|| .+.....+.+|...|.+++|   ++++. .+++++.||.|++||+.    ..+.+..+.+|..   .|
T Consensus       138 ~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~---~~~~~~~l~~~~~d~~v~vwd~~----~~~~~~~~~~~~~~~~~v  209 (615)
T 1pgu_A          138 RDNFGVFISWD-SGNSLGEVSGHSQRINACHL---KQSRPMRSMTVGDDGSVVFYQGP----PFKFSASDRTHHKQGSFV  209 (615)
T ss_dssp             SSCSEEEEETT-TCCEEEECCSCSSCEEEEEE---CSSSSCEEEEEETTTEEEEEETT----TBEEEEEECSSSCTTCCE
T ss_pred             CCCccEEEEEE-CCCcceeeecCCccEEEEEE---CCCCCcEEEEEeCCCcEEEEeCC----CcceeeeecccCCCCceE
Confidence                7999999 66678888999999999999   66666 89999999999999954    4567888899999   99


Q ss_pred             EEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-c---CccCcccEEE
Q psy2107         208 ETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-K---GHKEAISAVQ  282 (391)
Q Consensus       208 ~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~v~~~~  282 (391)
                      .+++|+|+ +++|++++.||.|++||++++                             +.+..+ .   .|...|.+++
T Consensus       210 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~-----------------------------~~~~~~~~~~~~~~~~v~~~~  260 (615)
T 1pgu_A          210 RDVEFSPDSGEFVITVGSDRKISCFDGKSG-----------------------------EFLKYIEDDQEPVQGGIFALS  260 (615)
T ss_dssp             EEEEECSTTCCEEEEEETTCCEEEEETTTC-----------------------------CEEEECCBTTBCCCSCEEEEE
T ss_pred             EEEEECCCCCCEEEEEeCCCeEEEEECCCC-----------------------------CEeEEecccccccCCceEEEE
Confidence            99999999 999999999999999999763                             345556 5   7999999999


Q ss_pred             eccCCeEEEEECCCeEEEEecccCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         283 WTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      |+++..+++++.|+.|++||+++++.+..+..+     ..+.++.|. +++++++|+.||.|++||+...+   ....+.
T Consensus       261 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~---~~~~~~  336 (615)
T 1pgu_A          261 WLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDE---VLKTIS  336 (615)
T ss_dssp             ESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEE---EEEEEC
T ss_pred             EcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCc---EEEEEe
Confidence            994456999999999999999999999998876     467788885 89999999999999999987644   667888


Q ss_pred             cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       358 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|...|++++| | +   +++++.||.|++||++
T Consensus       337 ~~~~~v~~~~~-~-~---l~~~~~dg~i~~w~~~  365 (615)
T 1pgu_A          337 GHNKGITALTV-N-P---LISGSYDGRIMEWSSS  365 (615)
T ss_dssp             CCSSCEEEEET-T-T---TEEEETTSCEEETTTT
T ss_pred             CCCCCEEEEEe-c-C---cEEECCCCeEEEEEch
Confidence            89999999999 8 3   7888888888888863

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=100.00  E-value=1.4e-32  Score=244.79  Aligned_cols=263  Identities=16%  Similarity=0.128  Sum_probs=169.5

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceE------EeccCCCCCeeEEEEEec-----CCCCeEEEEEeCCCc
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHK------LNIPGHGGPVKGVAWLYN-----DGKDAAFISVSTDQT  181 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~------~~~~~~~~~v~~l~~~~~-----~~~~~~l~s~~~dg~  181 (391)
                      |...+....+.  +.++++++.|++|+|||.+....      ..+.+|.+.|++++|+|.     ..++.+|++|+.|++
T Consensus        88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~t  167 (393)
T 4gq1_A           88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCT  167 (393)
T ss_dssp             ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSE
T ss_pred             cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCe
Confidence            44444443443  55899999999999999854322      246799999999999873     236889999999999


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      |++||+.    ...++..+..|...|.+++|+|++ .+|++|+.||.|++||+++++...............    ....
T Consensus       168 v~~Wd~~----~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~----~~s~  239 (393)
T 4gq1_A          168 LIIWRLT----DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPW----LLTL  239 (393)
T ss_dssp             EEEEEEE----TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCC----SEEE
T ss_pred             EEEEECC----CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccce----EEec
Confidence            9999975    234566667789999999999987 479999999999999998866543221111000000    0000


Q ss_pred             cCCCCCceeeecCccCcccEEEec-cC-CeEEEEECCCeEEEEecccCceeEEEECCe-ee------------------E
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWT-AV-DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SF------------------F  319 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i------------------~  319 (391)
                      ............+|...+.++.|. ++ ..+++++.|+++++||+..++....+..+. .+                  .
T Consensus       240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (393)
T 4gq1_A          240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL  319 (393)
T ss_dssp             ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS
T ss_pred             ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce
Confidence            011111222345788999999997 44 569999999999999998877655544321 11                  2


Q ss_pred             EEEECC--CCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         320 DVHYSP--LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       320 ~~~~~p--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ...++|  ++.++++|+.||.|++||+..+.   ......+|..+|++++|+| ++++||+++.|| +.+|.|
T Consensus       320 ~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~---~~~~~~~~~~~V~svafsp-dG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          320 GACPHPRYMDYFATAHSQHGLIQLINTYEKD---SNSIPIQLGMPIVDFCWHQ-DGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             CCEECSSCTTEEEEEETTTTEEEEEETTCTT---CCEEEEECSSCEEEEEECT-TSSEEEEEESSE-EEEEEE
T ss_pred             eEEEccCCCCEEEEEECCCCEEEEEECCCCc---EEEEecCCCCcEEEEEEcC-CCCEEEEEeCCC-eEEEEE
Confidence            223333  34467788899999999998766   4455667889999999999 667899998766 555543

>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.1e-32  Score=240.55  Aligned_cols=236  Identities=19%  Similarity=0.336  Sum_probs=194.4

Q ss_pred             CCCC--cEEEEEecCCEEEEEECCCeEEEEcCC-CceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         114 LHDD--WVSAIDFHNDWILTGCYDHSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       114 ~h~~--~V~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      +|.+  .+.+++|+++.+++++.||.|++||+. +.....+. .|...|.+++|   ++++.+|++|+.||.|++||+. 
T Consensus        89 ~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~---s~~~~~l~~~~~dg~i~iwd~~-  164 (401)
T 4aez_A           89 GIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKW---SHDGSFLSVGLGNGLVDIYDVE-  164 (401)
T ss_dssp             TCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEE---CTTSSEEEEEETTSCEEEEETT-
T ss_pred             CCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEE---CCCCCEEEEECCCCeEEEEECc-
Confidence            4444  356688888888999999999999994 44444444 38899999999   7789999999999999999964 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                         ....+..+.+|...|.+++|+  +++|++|+.||.|++||++..                            .....
T Consensus       165 ---~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~----------------------------~~~~~  211 (401)
T 4aez_A          165 ---SQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIA----------------------------NHQIG  211 (401)
T ss_dssp             ---TCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSS----------------------------SCEEE
T ss_pred             ---CCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccC----------------------------cceee
Confidence               345677888999999999994  569999999999999999742                            23567


Q ss_pred             eecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCC-EEEEee--CCCcEEEEcC
Q psy2107         270 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSK-LVITAS--ADKQIRLYDP  344 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~-~l~~g~--~dg~i~iwd~  344 (391)
                      .+.+|...|.+++|++++ .+++++.|+.|++||+++++....+..+. .+.+++|+|++. ++++|+  .|+.|++||+
T Consensus       212 ~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~  291 (401)
T 4aez_A          212 TLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNA  291 (401)
T ss_dssp             EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred             EEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence            788999999999999654 69999999999999999999988887554 899999999765 566654  7999999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEE--eeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~dg~v~iwdlr  391 (391)
                      +++.   ....+. |...|.+++|+| ++.++++  |+.||.|++||++
T Consensus       292 ~~~~---~~~~~~-~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~  335 (401)
T 4aez_A          292 ATGA---RVNTVD-AGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYS  335 (401)
T ss_dssp             TTCC---EEEEEE-CSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEE
T ss_pred             CCCC---EEEEEe-CCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecC
Confidence            8766   555554 667899999999 5566777  4489999999963

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.9e-31  Score=240.88  Aligned_cols=243  Identities=15%  Similarity=0.047  Sum_probs=194.3

Q ss_pred             CCCCcEEEEEec--CCEE-EEEECCCeEEEEcCC--C-ceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEE
Q psy2107         114 LHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRR--G-EHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW  185 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~--~-~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iw  185 (391)
                      +|.+.|++++|+  +++| ++|+.||.|+|||+.  . ..+..+.  .|...|.+++|   ++++.+|++|+.||.+++|
T Consensus       100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~---sp~~~~l~~~~~~g~v~~~  176 (450)
T 2vdu_B          100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI---AEDDTTVIIADKFGDVYSI  176 (450)
T ss_dssp             CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE---CTTSSEEEEEETTSEEEEE
T ss_pred             ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEE---cCCCCEEEEEeCCCcEEEE
Confidence            577789999998  5575 899999999999986  3 4444444  67889999999   7789999999999999999


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSES---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ++............+.+|...|.+++|+|+   +++|++|+.|+.|++||+++++                         
T Consensus       177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~-------------------------  231 (450)
T 2vdu_B          177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF-------------------------  231 (450)
T ss_dssp             ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT-------------------------
T ss_pred             ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc-------------------------
Confidence            965332211133456789999999999999   9999999999999999997633                         


Q ss_pred             CCCCceee-ecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC--------------------------
Q psy2107         263 SSRTPLIT-LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN--------------------------  315 (391)
Q Consensus       263 ~~~~~~~~-~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------------------------  315 (391)
                          .+.. +.+|...|.+++|+++..|++++.|+.|++||+++++.+..+..+                          
T Consensus       232 ----~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  307 (450)
T 2vdu_B          232 ----IVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIE  307 (450)
T ss_dssp             ----CEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBC
T ss_pred             ----eeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccce
Confidence                3444 568999999999994456999999999999999999988887632                          


Q ss_pred             eeeEEEEECCCCCEEEEee-CCCcEEEEcC--CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC------CCcEE
Q psy2107         316 KSFFDVHYSPLSKLVITAS-ADKQIRLYDP--KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF------DNSVK  386 (391)
Q Consensus       316 ~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~------dg~v~  386 (391)
                      ..+.+++|+|++++|++++ .++.|++|++  ........+..+..| ..|.+++|+| ++.+++.++.      +..|.
T Consensus       308 ~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~-~~~~v~~~~~~~~~~~~~~i~  385 (450)
T 2vdu_B          308 FAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN-DEFQVTLDNKESSGVQKNFAK  385 (450)
T ss_dssp             CCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET-TEEEEEECCTTCCSSCCCSEE
T ss_pred             EEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC-CcEEEEEecccCCCCCCcceE
Confidence            3688999999999999998 8999999999  443223466677777 8899999999 6544444443      45688


Q ss_pred             EEec
Q psy2107         387 LWDL  390 (391)
Q Consensus       387 iwdl  390 (391)
                      +|.+
T Consensus       386 v~~~  389 (450)
T 2vdu_B          386 FIEY  389 (450)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8875

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-32  Score=245.99  Aligned_cols=261  Identities=10%  Similarity=0.036  Sum_probs=202.4

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG  145 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~  145 (391)
                      ...+|++||+++++          .+.+.+++  . .  ..  .....+|...|.+++|+++-     .++.+.+|+.++
T Consensus        19 ~sv~~SpDG~~iAS----------as~D~TV~--d-~--~~--~~~l~gh~~~v~~V~FsPdg-----~~~~~~~~~~~~   76 (588)
T 2j04_A           19 NNLTWARDGTLYLT----------TFPDISIG--Q-P--KY--AKDINCNSKNLFHVKEFPLE-----FENKLDFELAQQ   76 (588)
T ss_dssp             CCEEECTTSCEEEE----------CSSSEEEE--E-E--CC--CSCCSSBGGGTEEEEEECCC-----CCCTTTTSCCCS
T ss_pred             EEEEECCCCCEEEE----------EcCCceee--c-c--cc--cceecCCCccEEEEEECCCC-----CcceEEEEeCCC
Confidence            55799999999987          45677777  2 2  11  12335899999999998544     556666665544


Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC-----CeEEEEEcCCCCEEE
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER-----GLETVTVSESRQQFA  220 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~  220 (391)
                      .....+ .|...|.+++|   +|+|..||+++.||.|++||..      .++..+. |..     .|.+++|+|+|++|+
T Consensus        77 ~~~~~~-~~~~~V~~vaw---SPdG~~LAs~s~dg~V~iwd~~------~~l~~l~-~~~~~~~~sv~svafSPDG~~LA  145 (588)
T 2j04_A           77 NGLLNS-QPVCYPRVCKP---SPIDDWMAVLSNNGNVSVFKDN------KMLTNLD-SKGNLSSRTYHCFEWNPIESSIV  145 (588)
T ss_dssp             SCSSTT-SCSCCEEEEEE---CSSSSCEEEEETTSCEEEEETT------EEEEECC-CSSCSTTTCEEEEEECSSSSCEE
T ss_pred             ceEeec-CCCCcEEEEEE---CCCCCEEEEEeCCCcEEEEeCC------ceeeecc-CCCccccccEEEEEEcCCCCEEE
Confidence            444443 45889999999   8899999999999999999932      2566666 665     599999999999999


Q ss_pred             EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee----cCccCcccEEEeccCCeEEEEECCC
Q psy2107         221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL----KGHKEAISAVQWTAVDEIITSSWDH  296 (391)
Q Consensus       221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~l~s~~~dg  296 (391)
                      +|+.||.|++||+.++....                      ...-.+.++    .+|...|.+++|+|++ +++++.|+
T Consensus       146 sgs~DGtVkIWd~~~~~l~~----------------------~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~  202 (588)
T 2j04_A          146 VGNEDGELQFFSIRKNSENT----------------------PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNN  202 (588)
T ss_dssp             EEETTSEEEEEECCCCTTTC----------------------CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTC
T ss_pred             EEcCCCEEEEEECCCCcccc----------------------ccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCC
Confidence            99999999999997643200                      000024554    6788899999999989 99999999


Q ss_pred             eEEEEecccCce---eEEEE-CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE--C
Q psy2107         297 TLKIWDAELGGM---KSEIV-GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW--S  369 (391)
Q Consensus       297 ~i~iwd~~~~~~---~~~~~-~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~--~  369 (391)
                      +|++||+..+..   ..++. ++ ..|.+++|+  |+.||+++ ++.|++||+....   ......+|...|..++|  +
T Consensus       203 tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~---~~~~~~gh~~~V~~va~~~s  276 (588)
T 2j04_A          203 SVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYS---ISSLKTGSLENFHIIPLNHE  276 (588)
T ss_dssp             CEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTE---EEEEECSCCSCCCEEEETTC
T ss_pred             eEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCe---EEEEEcCCCceEEEEEeeeC
Confidence            999999988774   34564 44 489999999  68999887 6999999987654   42333379999999999  9


Q ss_pred             CCCCCEEEEeeCCCcEEEEec
Q psy2107         370 PIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      | ++..+++++.||+ ++|.+
T Consensus       277 ~-d~~~La~a~edG~-klw~~  295 (588)
T 2j04_A          277 K-ESTILLMSNKTSY-KVLLE  295 (588)
T ss_dssp             S-SCEEEEECSSCEE-EEEES
T ss_pred             C-CCCEEEEEcCCCC-EEEee
Confidence            9 6678999999999 99986

>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.2e-30  Score=235.04  Aligned_cols=238  Identities=11%  Similarity=0.091  Sum_probs=187.1

Q ss_pred             CcEEEEEec--CCEEEEEECCCeEEEEcC-CCc---eEEecc--------------------------------------
Q psy2107         117 DWVSAIDFH--NDWILTGCYDHSVHIWTR-RGE---HKLNIP--------------------------------------  152 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~---~~~~~~--------------------------------------  152 (391)
                      .++.+++|+  |++|+++ .++.|++||+ +++   .+..+.                                      
T Consensus         5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (450)
T 2vdu_B            5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS   83 (450)
T ss_dssp             CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred             ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence            367788887  6655555 5789999998 555   333332                                      


Q ss_pred             ----------------CCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEe--cCCCCeEEEEEc
Q psy2107         153 ----------------GHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCR--GHERGLETVTVS  213 (391)
Q Consensus       153 ----------------~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~v~~l~~~  213 (391)
                                      +|.+.|.+++|   ++++.+| ++|+.||.|++||+.....  ..+..+.  .|...|.+++|+
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~---s~d~~~l~~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~v~~~~~s  158 (450)
T 2vdu_B           84 IKRTAAKVPSPGLGAPPIYSYIRNLRL---TSDESRLIACADSDKSLLVFDVDKTSK--NVLKLRKRFCFSKRPNAISIA  158 (450)
T ss_dssp             ----------------CCCCCEEEEEE---CTTSSEEEEEEGGGTEEEEEEECSSSS--SCEEEEEEEECSSCEEEEEEC
T ss_pred             ccccCccccCCCCCCCccCCceEEEEE---cCCCCEEEEEECCCCeEEEEECcCCCC--ceeeeeecccCCCCceEEEEc
Confidence                            34447999999   7788885 8999999999999762122  2333333  577899999999


Q ss_pred             CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---C-eE
Q psy2107         214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---D-EI  289 (391)
Q Consensus       214 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~-~l  289 (391)
                      |++++|++|+.||.|++|++.++....                         .+...+.+|...|.+++|+|+   + .|
T Consensus       159 p~~~~l~~~~~~g~v~~~~~~~~~~~~-------------------------~~~~~~~~h~~~v~~~~~sp~~~~~~~l  213 (450)
T 2vdu_B          159 EDDTTVIIADKFGDVYSIDINSIPEEK-------------------------FTQEPILGHVSMLTDVHLIKDSDGHQFI  213 (450)
T ss_dssp             TTSSEEEEEETTSEEEEEETTSCCCSS-------------------------CCCCCSEECSSCEEEEEEEECTTSCEEE
T ss_pred             CCCCEEEEEeCCCcEEEEecCCccccc-------------------------ccceeeecccCceEEEEEcCCCCCCcEE
Confidence            999999999999999999997644310                         033456789999999999976   6 69


Q ss_pred             EEEECCCeEEEEecccCceeEEEE-CC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec----------
Q psy2107         290 ITSSWDHTLKIWDAELGGMKSEIV-GN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS----------  357 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~~~~~~-~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~----------  357 (391)
                      ++++.|+.|++||+++++.+..+. .+ ..|.+++|+ ++++|++|+.|+.|++||+++++   ++..+.          
T Consensus       214 ~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~~~~~~~  289 (450)
T 2vdu_B          214 ITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGK---NLSTFDYNSLIKPYLN  289 (450)
T ss_dssp             EEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCC---EEEEEECHHHHGGGCC
T ss_pred             EEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCc---Eeeeecchhhhhhhhh
Confidence            999999999999999998887744 34 589999999 99999999999999999998866   444443          


Q ss_pred             ---------------cccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107         358 ---------------SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       358 ---------------~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                                     .+...|.+++|+| ++.++++++ .|+.|+|||+
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~~d~~i~iw~~  337 (450)
T 2vdu_B          290 DQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFFVEATKCIIILEM  337 (450)
T ss_dssp             TTSBC----------CBCCCEEEEEECS-SSSEEEEEETTCSEEEEEEE
T ss_pred             hcccccccccccccccceEEEEEEEEeC-CCCEEEEEECCCCeEEEEEe
Confidence                           2345799999999 566787777 8999999997

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=5.1e-32  Score=237.01  Aligned_cols=226  Identities=10%  Similarity=0.051  Sum_probs=171.3

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-----CCceeEEEE
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-----SNSIECIHV  199 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-----~~~~~~~~~  199 (391)
                      +.++++|+.||+|++||+ +++.+..+.  ...|.++.|   ++.   +++++.|++|++|+....     ......+..
T Consensus        48 ~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~---~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~  119 (343)
T 3lrv_A           48 KWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGE---HPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE  119 (343)
T ss_dssp             EEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCC---CCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred             CCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeee---CCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence            679999999999999999 455555554  467888888   444   999999999999974311     012222333


Q ss_pred             Ee-cCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-cCcc
Q psy2107         200 CR-GHERGLETVTVSE--SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-KGHK  275 (391)
Q Consensus       200 ~~-~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  275 (391)
                      +. +|...|.+++|+|  +++++++|+.||.|++||+++++                             ..... ..|.
T Consensus       120 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----------------------------~~~~~~~~~~  170 (343)
T 3lrv_A          120 IEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS-----------------------------QYIVHSAKSD  170 (343)
T ss_dssp             EECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC-----------------------------EEEEECCCSS
T ss_pred             eecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc-----------------------------EEEEEecCCC
Confidence            33 6778999999999  99999999999999999997633                             33333 3456


Q ss_pred             CcccEEEeccCCe-EEEEECCCeEEEEecccCcee-EEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         276 EAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMK-SEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       276 ~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~-~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      ..+.+++|+|++. +++|+.||.|++||+++++.. ..+..  ..+|.+++|+|++.+|++++ ++.|++||++......
T Consensus       171 ~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~  249 (343)
T 3lrv_A          171 VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL  249 (343)
T ss_dssp             CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB
T ss_pred             CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce
Confidence            6799999997654 778899999999999999887 67766  45999999999999999999 5599999998765322


Q ss_pred             EEEEeccccCcEE--EEEECCCCCCEEEEeeC-CCcEEEEec
Q psy2107         352 VKSTFSSHKEWVQ--SVRWSPIDPQLFVSASF-DNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~~v~--~~~~~~~~~~~l~s~~~-dg~v~iwdl  390 (391)
                      .+..+..|...+.  +++|+| ++.+|++++. |+.|+||++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~  290 (343)
T 3lrv_A          250 AYPTYTIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKF  290 (343)
T ss_dssp             SSCCCBC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred             eecccccccccccceEEEECC-CCCEEEEecCCCCcEEEEEE
Confidence            2222223444444  699999 6678999888 999999986

>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*

Probab=100.00  E-value=2.4e-32  Score=246.81  Aligned_cols=209  Identities=11%  Similarity=0.149  Sum_probs=166.3

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcE
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLL  228 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i  228 (391)
                      ...+|...|++|+|+|.  +..+||+|+.||.|++||+.  .........+.+|.+.|++|+|+| ++++|++|+.||.|
T Consensus       114 ~~~~~~~~V~~l~~~P~--~~~~lasGs~dg~i~lWd~~--~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v  189 (435)
T 4e54_B          114 KAAPFDRRATSLAWHPT--HPSTVAVGSKGGDIMLWNFG--IKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT  189 (435)
T ss_dssp             EEEECSSCEEEEEECSS--CTTCEEEEETTSCEEEECSS--CCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred             cCCCCCCCEEEEEEeCC--CCCEEEEEeCCCEEEEEECC--CCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence            34468889999999553  55689999999999999965  334455666778999999999998 68999999999999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCc
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      ++||+++...                           ........+...+.+++|+++ ..|++|+.||.|++||++. +
T Consensus       190 ~iwd~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~  241 (435)
T 4e54_B          190 RLQDFKGNIL---------------------------RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-K  241 (435)
T ss_dssp             EEEETTSCEE---------------------------EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-C
T ss_pred             EEeeccCCce---------------------------eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-c
Confidence            9999965221                           111122234556789999965 4688999999999999874 4


Q ss_pred             eeEEEECC-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         308 MKSEIVGN-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       308 ~~~~~~~~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      .+..+..| ..|.+++|+|++. ++++|+.|+.|++||++............+|...|++++|+| ++.+|++++.||.|
T Consensus       242 ~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i  320 (435)
T 4e54_B          242 ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSP-DGARLLTTDQKSEI  320 (435)
T ss_dssp             BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCT-TSSEEEEEESSSCE
T ss_pred             eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECC-CCCeeEEEcCCCEE
Confidence            45555554 4899999999976 788999999999999987654433344568999999999999 66789999999999


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      +|||++
T Consensus       321 ~iwd~~  326 (435)
T 4e54_B          321 RVYSAS  326 (435)
T ss_dssp             EEEESS
T ss_pred             EEEECC
Confidence            999974

>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.9e-31  Score=231.84  Aligned_cols=213  Identities=20%  Similarity=0.348  Sum_probs=179.7

Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGW  224 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~  224 (391)
                      ....+.+|.+.|++++|   ++++.+|++|+.||.|++|++.  ......+..+.+|...|.+++|+++  +++|++|+.
T Consensus         3 ~~~~~~~h~~~v~~~~~---s~~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~   77 (379)
T 3jrp_A            3 MVVIANAHNELIHDAVL---DYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY   77 (379)
T ss_dssp             --CCEEECCCCEEEEEE---CSSSSEEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred             ccEEecCCcccEEEEEE---cCCCCEEEEEECCCcEEEEecC--CCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence            44567789999999999   7789999999999999999975  3456777888999999999999987  899999999


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEE
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIW  301 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iw  301 (391)
                      ||.|++||+++++                           ......+..|...|.+++|+|+   ..+++++.|+.|++|
T Consensus        78 dg~v~iwd~~~~~---------------------------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~  130 (379)
T 3jrp_A           78 DGKVLIWKEENGR---------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV  130 (379)
T ss_dssp             TSCEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred             CCEEEEEEcCCCc---------------------------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEE
Confidence            9999999997632                           1256677789999999999964   569999999999999


Q ss_pred             ecccCce--eEEEEC-CeeeEEEEECC-------------CCCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEE
Q psy2107         302 DAELGGM--KSEIVG-NKSFFDVHYSP-------------LSKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQ  364 (391)
Q Consensus       302 d~~~~~~--~~~~~~-~~~i~~~~~~p-------------~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~  364 (391)
                      |++++..  ...+.. ...+.+++|+|             ++.+|++|+.|+.|++||++..... .+...+.+|...|+
T Consensus       131 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~  210 (379)
T 3jrp_A          131 EFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR  210 (379)
T ss_dssp             ECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred             ecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEe
Confidence            9998743  333433 44899999999             6999999999999999999765432 35567889999999


Q ss_pred             EEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         365 SVRWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       365 ~~~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                      +++|+|++  +.+|++++.||.|++||++
T Consensus       211 ~~~~sp~~~~~~~l~s~~~dg~i~iwd~~  239 (379)
T 3jrp_A          211 DVAWSPTVLLRSYLASVSQDRTCIIWTQD  239 (379)
T ss_dssp             EEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred             EEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence            99999953  7899999999999999974

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.98  E-value=3.5e-30  Score=216.72  Aligned_cols=235  Identities=12%  Similarity=0.141  Sum_probs=171.3

Q ss_pred             cEEEEEec----CC-EEEEEECCCeEEEEcC-CC---ceEEeccCCCCCeeEEEEEec----------------------
Q psy2107         118 WVSAIDFH----ND-WILTGCYDHSVHIWTR-RG---EHKLNIPGHGGPVKGVAWLYN----------------------  166 (391)
Q Consensus       118 ~V~~~~~~----~~-~l~t~~~dg~i~iwd~-~~---~~~~~~~~~~~~v~~l~~~~~----------------------  166 (391)
                      .+.++-|.    .+ .+++++. ..|++|+. ++   +.+.+...|..+|..+.+.|.                      
T Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~  119 (356)
T 2w18_A           41 DVSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC  119 (356)
T ss_dssp             EEEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred             EEeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence            35555554    22 5666665 68999998 55   566777777776666666551                      


Q ss_pred             CCC----CeEEEEEeC--------------------CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC---CCCEE
Q psy2107         167 DGK----DAAFISVST--------------------DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE---SRQQF  219 (391)
Q Consensus       167 ~~~----~~~l~s~~~--------------------dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l  219 (391)
                      +++    +..+++++.                    |+.|++|++..   ..+.+..+.+|...++.++|++   ++.+|
T Consensus       120 spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~---dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L  196 (356)
T 2w18_A          120 SSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAE---DGGGKENQFLMPPEETILTFAEVQGMQEAL  196 (356)
T ss_dssp             ------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECT---TSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred             CCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECC---CCceeeeeccCCCceeeEEeeccCCCCceE
Confidence            556    666666553                    88999999742   2356667778899999999999   77999


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc---CcccEEEeccCCeE-------
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTAVDEI-------  289 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l-------  289 (391)
                      ++|+.|++|++||+++++                             .+.++.+|.   ..+.+++|+|++.+       
T Consensus       197 aSgS~D~TIkIWDl~TGk-----------------------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~  247 (356)
T 2w18_A          197 LGTTIMNNIVIWNLKTGQ-----------------------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHP  247 (356)
T ss_dssp             EEEETTSEEEEEETTTCC-----------------------------EEEEEECCC---CCCEEEEEEETTEEEEEEC--
T ss_pred             EEecCCCcEEEEECCCCc-----------------------------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccC
Confidence            999999999999998744                             566676543   35667789977763       


Q ss_pred             ------EEEECCCeEEEEecccCceeEEEE-----CCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         290 ------ITSSWDHTLKIWDAELGGMKSEIV-----GNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       290 ------~s~~~dg~i~iwd~~~~~~~~~~~-----~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                            ++|+.|++|++||..+++.+..+.     ++. .+.+..++  +.++++|+.|++|+|||+.+++   ++.++.
T Consensus       248 ~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk---~l~tL~  322 (356)
T 2w18_A          248 CAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ---CTALLP  322 (356)
T ss_dssp             ----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS---EEEEEC
T ss_pred             CCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc---EEEEec
Confidence                  567889999999999998876652     222 23333333  7789999999999999999887   888899


Q ss_pred             cccCcEE-EEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         358 SHKEWVQ-SVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       358 ~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|...+. .++|+| ++.+|+||+.|++|+|||+.
T Consensus       323 gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~~  356 (356)
T 2w18_A          323 PVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHYS  356 (356)
T ss_dssp             CC--CCCCEEEECS-SSSEEEEECTTSCEEEEEEC
T ss_pred             CCCCCeEEEEEECC-CCCEEEEEECCCcEEEecCC
Confidence            8987655 589999 66789999999999999974

>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a

Probab=99.98  E-value=1e-29  Score=222.01  Aligned_cols=208  Identities=24%  Similarity=0.404  Sum_probs=172.9

Q ss_pred             EEeccCCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC-ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         148 KLNIPGHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN-SIECIHVCRGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       148 ~~~~~~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      ..++.+|.+.|++|+|   +|+ +++|++|+.||+|++||+..... ...+...+.+|...|.+++|+|++++|++|+.|
T Consensus        31 ~~tL~GH~~~V~~v~~---sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d  107 (340)
T 4aow_A           31 RGTLKGHNGWVTQIAT---TPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD  107 (340)
T ss_dssp             EEEECCCSSCEEEEEE---CTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred             EEEECCccCCEEEEEE---eCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc
Confidence            3478999999999999   544 57999999999999999864432 345677889999999999999999999999999


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeEEEEecc
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~  304 (391)
                      +.|++|+...                             .........+...+..+.+++ +..+++++.|+.+++||+.
T Consensus       108 ~~i~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~  158 (340)
T 4aow_A          108 GTLRLWDLTT-----------------------------GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTL  158 (340)
T ss_dssp             SEEEEEETTT-----------------------------TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred             ccceEEeecc-----------------------------cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeC
Confidence            9999999975                             234455566777888888885 4569999999999999987


Q ss_pred             cCceeEEE-EC-CeeeEEEEECCCC--CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee
Q psy2107         305 LGGMKSEI-VG-NKSFFDVHYSPLS--KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       305 ~~~~~~~~-~~-~~~i~~~~~~p~~--~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                      ........ .. ...+..++|++++  .++++++.|+.|++||++..+   +...+.+|.+.|++++|+| ++.+|++|+
T Consensus       159 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~---~~~~~~~h~~~v~~~~~s~-~~~~l~s~s  234 (340)
T 4aow_A          159 GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK---LKTNHIGHTGYLNTVTVSP-DGSLCASGG  234 (340)
T ss_dssp             SCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECT-TSSEEEEEE
T ss_pred             CCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc---eeeEecCCCCcEEEEEECC-CCCEEEEEe
Confidence            65543332 22 3478889998764  578899999999999998765   7778899999999999999 667899999


Q ss_pred             CCCcEEEEecC
Q psy2107         381 FDNSVKLWDLR  391 (391)
Q Consensus       381 ~dg~v~iwdlr  391 (391)
                      .||.|++||++
T Consensus       235 ~Dg~i~iwd~~  245 (340)
T 4aow_A          235 KDGQAMLWDLN  245 (340)
T ss_dssp             TTCEEEEEETT
T ss_pred             CCCeEEEEEec
Confidence            99999999985

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.98  E-value=6e-30  Score=224.68  Aligned_cols=231  Identities=11%  Similarity=0.139  Sum_probs=169.9

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~  187 (391)
                      ....|.+.|++++|+  +++|++|+.+| ++||+...........+ ..+..+++.   ++++.+ ++++.|++|++||+
T Consensus        14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~d~~v~iWd~   88 (355)
T 3vu4_A           14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM-RHLSKVRML---HRTNYVAFVTGVKEVVHIWDD   88 (355)
T ss_dssp             -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC-SCCCEEEEC---TTSSEEEEECSSTTEEEEEET
T ss_pred             ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec-CCeEEEEEc---CCCCEEEEEECCccEEEEEEC
Confidence            345699999999998  66888888775 78999865443322222 247778884   444544 67888999999995


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC-CCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS-KERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      .    ..+.+..+. +...|.+++++++.  ++++ .|+.|++||+.+. +.                            
T Consensus        89 ~----~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~----------------------------  132 (355)
T 3vu4_A           89 V----KKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKR----------------------------  132 (355)
T ss_dssp             T----TTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCB----------------------------
T ss_pred             C----CCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCcee----------------------------
Confidence            4    335566665 66799999999864  4443 4789999999874 22                            


Q ss_pred             ceeeecCccCcccEEEeccCCeEEE--EECCCeEEEEecccCc----------------eeEEEECCe-eeEEEEECCCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDEIIT--SSWDHTLKIWDAELGG----------------MKSEIVGNK-SFFDVHYSPLS  327 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~l~s--~~~dg~i~iwd~~~~~----------------~~~~~~~~~-~i~~~~~~p~~  327 (391)
                       +..+..   +...+++++ ..++.  |+.||.|++||+.++.                .+..+..|. .|.+++|+|+|
T Consensus       133 -~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g  207 (355)
T 3vu4_A          133 -ITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS  207 (355)
T ss_dssp             -SSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS
T ss_pred             -eEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC
Confidence             222222   233444555 56555  5789999999999865                256666665 89999999999


Q ss_pred             CEEEEeeCCCc-EEEEcCCCCCcceEEEEec-c-ccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         328 KLVITASADKQ-IRLYDPKVKEGAIVKSTFS-S-HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       328 ~~l~~g~~dg~-i~iwd~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++|++|+.|++ |++||+++++   .+..+. + |...|++++|+| ++.+|++++.|++|++||++
T Consensus       208 ~~l~s~s~d~~~v~iwd~~~~~---~~~~~~~g~h~~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~  270 (355)
T 3vu4_A          208 DMVATCSQDGTIIRVFKTEDGV---LVREFRRGLDRADVVDMKWST-DGSKLAVVSDKWTLHVFEIF  270 (355)
T ss_dssp             SEEEEEETTCSEEEEEETTTCC---EEEEEECTTCCSCEEEEEECT-TSCEEEEEETTCEEEEEESS
T ss_pred             CEEEEEeCCCCEEEEEECCCCc---EEEEEEcCCCCCcEEEEEECC-CCCEEEEEECCCEEEEEEcc
Confidence            99999999998 9999998876   667776 5 999999999999 66789999999999999984

>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A

Probab=99.97  E-value=9.2e-30  Score=222.75  Aligned_cols=218  Identities=18%  Similarity=0.290  Sum_probs=180.2

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC--CCCEEEEEeCCCc
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE--SRQQFATGGWDCL  227 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~  227 (391)
                      .+.+|.+.|++++|   ++++.+|++|+.||.|++||+............+.+|...|.+++|+|  ++++|++|+.||.
T Consensus         6 ~~~gH~~~v~~~~~---~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~   82 (351)
T 3f3f_A            6 FDSGHDDLVHDVVY---DFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT   82 (351)
T ss_dssp             EECCCSSCEEEEEE---CSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred             cCcccccceeEEEE---cCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence            35689999999999   778999999999999999998765555577888899999999999999  6999999999999


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEecc
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDAE  304 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~~  304 (391)
                      |++||++++.....                    .....+...+..|...|.+++|+++   ..+++++.||.|++||++
T Consensus        83 v~vwd~~~~~~~~~--------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~  142 (351)
T 3f3f_A           83 VKLWEEDPDQEECS--------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDAL  142 (351)
T ss_dssp             EEEEEECTTSCTTS--------------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred             EEEEecCCCccccc--------------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence            99999987543110                    0112356778889999999999964   569999999999999999


Q ss_pred             cCceeEEEE--------------CCeeeEEEEECCC---CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         305 LGGMKSEIV--------------GNKSFFDVHYSPL---SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       305 ~~~~~~~~~--------------~~~~i~~~~~~p~---~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      +++.+..+.              ....+.+++|+|+   +.++++++.++.+.+|+..... ......+.+|...|++++
T Consensus       143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~  221 (351)
T 3f3f_A          143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-LHVAAKLPGHKSLIRSIS  221 (351)
T ss_dssp             STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-EEEEEECCCCCSCEEEEE
T ss_pred             ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-eeeeeecCCCCcceeEEE
Confidence            887554432              2347899999997   8999999999999888766543 334677889999999999


Q ss_pred             ECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107         368 WSPIDP---QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       368 ~~~~~~---~~l~s~~~dg~v~iwdlr  391 (391)
                      |+|+++   .+|++++.||.|++||++
T Consensus       222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~  248 (351)
T 3f3f_A          222 WAPSIGRWYQLIATGCKDGRIRIFKIT  248 (351)
T ss_dssp             ECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred             ECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence            999542   689999999999999974

>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A

Probab=99.97  E-value=7.7e-30  Score=224.67  Aligned_cols=226  Identities=10%  Similarity=0.016  Sum_probs=171.3

Q ss_pred             CCccceEEEEEEeccCCC-------CCCcccCCCCcEEEEEec--CCEEEE--EECCCeEEEEcCCCceEEeccCCCCCe
Q psy2107          90 ISSENVIDVEYLESTPTP-------SPLDCILHDDWVSAIDFH--NDWILT--GCYDHSVHIWTRRGEHKLNIPGHGGPV  158 (391)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~-------~~~~~~~h~~~V~~~~~~--~~~l~t--~~~dg~i~iwd~~~~~~~~~~~~~~~v  158 (391)
                      .+.++.+++|........       .......+...+.+++|+  |+++++  ++.|++|+|||+..........|.+.|
T Consensus       100 ~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V  179 (365)
T 4h5i_A          100 GKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEV  179 (365)
T ss_dssp             TSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCC
T ss_pred             ecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCce
Confidence            346677888876533221       122334466789999998  556654  457899999999554444334588899


Q ss_pred             eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECC
Q psy2107         159 KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----LLKIWSAD  234 (391)
Q Consensus       159 ~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~  234 (391)
                      .+++|   +|++.++++++.++ +++|+..  ............|...|.+++|+|+++++++++.|+    .+++|++.
T Consensus       180 ~~v~f---spdg~~l~s~s~~~-~~~~~~~--~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~  253 (365)
T 4h5i_A          180 KDLHF---STDGKVVAYITGSS-LEVISTV--TGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK  253 (365)
T ss_dssp             CEEEE---CTTSSEEEEECSSC-EEEEETT--TCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred             EEEEE---ccCCceEEecccee-EEEEEec--cCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence            99999   78899999998655 5566532  333333345567888999999999999999999887    57888876


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEE-
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEI-  312 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~-  312 (391)
                      .....                         ......+.+|...|++++|+|++ +|++|+.|++|+|||+++++++..+ 
T Consensus       254 ~~~~~-------------------------~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~  308 (365)
T 4h5i_A          254 SGNTS-------------------------VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK  308 (365)
T ss_dssp             TTEEE-------------------------EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET
T ss_pred             cceec-------------------------ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec
Confidence            53210                         11244677899999999999766 5889999999999999999999886 


Q ss_pred             ECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         313 VGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       313 ~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      .+| ..|++++|+|+|++|++|+.|++|+|||+..
T Consensus       309 ~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~  343 (365)
T 4h5i_A          309 QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL  343 (365)
T ss_dssp             TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred             CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence            444 4899999999999999999999999999864

>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B

Probab=99.97  E-value=1e-29  Score=229.20  Aligned_cols=217  Identities=18%  Similarity=0.339  Sum_probs=177.2

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC------CCceeEEEEEecCCCCeEEEEEcCCCC-EEEE
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE------SNSIECIHVCRGHERGLETVTVSESRQ-QFAT  221 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s  221 (391)
                      .....|.+.|++++|+|.  ++.+|++++.||.|++|++...      ......+..+.+|...|.+++|+|++. +|++
T Consensus       122 ~~~~~h~~~v~~l~~~p~--~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s  199 (430)
T 2xyi_A          122 EIKINHEGEVNRARYMPQ--NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS  199 (430)
T ss_dssp             EEEEEESSCCSEEEEETT--EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred             EEEEcCCCcEEEEEECCC--CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence            455679999999999542  3679999999999999997631      112456678889999999999999988 9999


Q ss_pred             EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc--CCeEEEEECCCeEE
Q psy2107         222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--VDEIITSSWDHTLK  299 (391)
Q Consensus       222 g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~l~s~~~dg~i~  299 (391)
                      |+.||.|++||+..+....                      ....+...+.+|...|.+++|+|  ...|++++.||.|+
T Consensus       200 ~~~dg~i~vwd~~~~~~~~----------------------~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~  257 (430)
T 2xyi_A          200 ASDDHTICLWDINATPKEH----------------------RVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM  257 (430)
T ss_dssp             ECTTSCEEEEETTSCCBGG----------------------GEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred             EeCCCeEEEEeCCCCCCCC----------------------ceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence            9999999999997632210                      00123456678999999999996  34588999999999


Q ss_pred             EEecccC---ceeEEEECC-eeeEEEEECCCCC-EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         300 IWDAELG---GMKSEIVGN-KSFFDVHYSPLSK-LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       300 iwd~~~~---~~~~~~~~~-~~i~~~~~~p~~~-~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      +||++++   +.+..+..+ ..+.+++|+|++. ++++|+.||.|++||++...  ..+..+.+|...|++++|+|++..
T Consensus       258 i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~~h~~~v~~i~~sp~~~~  335 (430)
T 2xyi_A          258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFESHKDEIFQVQWSPHNET  335 (430)
T ss_dssp             EEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEECCSSCEEEEEECSSCTT
T ss_pred             EEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEeecCCCCEEEEEECCCCCC
Confidence            9999987   566666555 4899999999987 68899999999999998733  245677789999999999997778


Q ss_pred             EEEEeeCCCcEEEEecC
Q psy2107         375 LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdlr  391 (391)
                      +|++++.||.|+|||++
T Consensus       336 ~l~s~~~d~~i~iwd~~  352 (430)
T 2xyi_A          336 ILASSGTDRRLHVWDLS  352 (430)
T ss_dssp             EEEEEETTSCCEEEEGG
T ss_pred             EEEEEeCCCcEEEEeCC
Confidence            89999999999999974

>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.9e-30  Score=223.90  Aligned_cols=250  Identities=10%  Similarity=0.027  Sum_probs=180.1

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCce----------EEec-cCCCCCee
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEH----------KLNI-PGHGGPVK  159 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~----------~~~~-~~~~~~v~  159 (391)
                      +.++.+.+|..........+.    ...|.++.+++. +++++.|++|++|+..+..          +... .+|.+.|.
T Consensus        55 ~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  129 (343)
T 3lrv_A           55 CEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEII  129 (343)
T ss_dssp             EETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEE
T ss_pred             CCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEE
Confidence            468889999875433211111    345667777777 9999999999999765321          3333 36778999


Q ss_pred             EEEEEecCC--CCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy2107         160 GVAWLYNDG--KDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSESRQQFATGGWDCLLKIWSADIS  236 (391)
Q Consensus       160 ~l~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~  236 (391)
                      +++|   ++  ++.++++|+.||+|++||++  ..  ..+... ..|...|.+++|+|++.+|++|+.||.|++||++++
T Consensus       130 ~~~~---~~~~~~~~l~s~s~dg~i~~wd~~--~~--~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~  202 (343)
T 3lrv_A          130 YMYG---HNEVNTEYFIWADNRGTIGFQSYE--DD--SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP  202 (343)
T ss_dssp             EEEC---CC---CCEEEEEETTCCEEEEESS--SS--CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred             EEEc---CCCCCCCEEEEEeCCCcEEEEECC--CC--cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence            9999   66  78899999999999999965  22  334444 345668999999999999999999999999999874


Q ss_pred             CCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC
Q psy2107         237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG  314 (391)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~  314 (391)
                      +.                            ....+.. |..+|.+++|+|++. |++++ |+.|++||+++++....+..
T Consensus       203 ~~----------------------------~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~  253 (343)
T 3lrv_A          203 DQ----------------------------ASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPT  253 (343)
T ss_dssp             TS----------------------------CCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCC
T ss_pred             CC----------------------------CccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecc
Confidence            32                            1145666 999999999997665 66777 66999999999876544432


Q ss_pred             ---C-eee--EEEEECCCCCEEEEeeC-CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC--CCCCEEEEeeCCCcE
Q psy2107         315 ---N-KSF--FDVHYSPLSKLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP--IDPQLFVSASFDNSV  385 (391)
Q Consensus       315 ---~-~~i--~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v  385 (391)
                         + ..+  .+++|+|+|++|++++. |+.|++|++........   .    .++..++|.+  .+...+++++.||.+
T Consensus       254 ~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~l~~~~~d~~~  326 (343)
T 3lrv_A          254 YTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWT---K----DEESALCLQSDTADFTDMDVVCGDGGI  326 (343)
T ss_dssp             CBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEE---E----EEEEECCC----CCCCEEEEEEETTEE
T ss_pred             cccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceE---e----cCceeEecCccccccceeEEEecCCce
Confidence               1 122  46999999999999988 99999999865432111   1    4566777766  123457777777777


Q ss_pred             EEE
Q psy2107         386 KLW  388 (391)
Q Consensus       386 ~iw  388 (391)
                      .++
T Consensus       327 ~~~  329 (343)
T 3lrv_A          327 AAI  329 (343)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            765

>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}

Probab=99.97  E-value=3.8e-29  Score=220.73  Aligned_cols=205  Identities=20%  Similarity=0.318  Sum_probs=173.9

Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                      ....+.+|.+.|++++|   ++++.+|++|+.||.|++||+.    ....+..+.+|...|.+++|+|++++|++++.||
T Consensus        24 ~~~~l~~h~~~v~~~~~---s~~~~~l~~~~~dg~i~vwd~~----~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg   96 (369)
T 3zwl_B           24 KAIKLTGHERPLTQVKY---NKEGDLLFSCSKDSSASVWYSL----NGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY   96 (369)
T ss_dssp             EEEEEECCSSCEEEEEE---CTTSCEEEEEESSSCEEEEETT----TCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT
T ss_pred             ccEEEEEeeceEEEEEE---cCCCCEEEEEeCCCEEEEEeCC----CchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC
Confidence            44567899999999999   7789999999999999999964    3467788899999999999999999999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECC-----CeEEE
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWD-----HTLKI  300 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d-----g~i~i  300 (391)
                      .|++||+++++                             .+..+. +...+.+++|++++ .+++++.+     +.|++
T Consensus        97 ~i~iwd~~~~~-----------------------------~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~  146 (369)
T 3zwl_B           97 SIKLWDVSNGQ-----------------------------CVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINI  146 (369)
T ss_dssp             EEEEEETTTCC-----------------------------EEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEE
T ss_pred             eEEEEECCCCc-----------------------------EEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEE
Confidence            99999997633                             445555 78899999999655 58888888     99999


Q ss_pred             EecccCce-----------eEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         301 WDAELGGM-----------KSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       301 wd~~~~~~-----------~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      ||+..+..           ...+..+.   .+.+++|+|++++|++|+.||.|++||++..  ......+..|...|.++
T Consensus       147 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~v~~~  224 (369)
T 3zwl_B          147 YEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN--YEYVDSIDLHEKSISDM  224 (369)
T ss_dssp             EEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTT--TEEEEEEECCSSCEEEE
T ss_pred             EEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCC--cEeEEEEecCCCceeEE
Confidence            99987642           22232222   7999999999999999999999999999862  22667888899999999


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+| ++.+|++++.||.|++||++
T Consensus       225 ~~~~-~~~~l~~~~~d~~i~v~d~~  248 (369)
T 3zwl_B          225 QFSP-DLTYFITSSRDTNSFLVDVS  248 (369)
T ss_dssp             EECT-TSSEEEEEETTSEEEEEETT
T ss_pred             EECC-CCCEEEEecCCceEEEEECC
Confidence            9999 67789999999999999975

>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}

Probab=99.97  E-value=8.3e-29  Score=221.66  Aligned_cols=240  Identities=18%  Similarity=0.278  Sum_probs=183.3

Q ss_pred             ccCCCCcEEEEEecC---CEEEEEECCCeEEEEcCCCc-eEEec-------------cCCCCCeeEEEEEecCCCCeEEE
Q psy2107         112 CILHDDWVSAIDFHN---DWILTGCYDHSVHIWTRRGE-HKLNI-------------PGHGGPVKGVAWLYNDGKDAAFI  174 (391)
Q Consensus       112 ~~~h~~~V~~~~~~~---~~l~t~~~dg~i~iwd~~~~-~~~~~-------------~~~~~~v~~l~~~~~~~~~~~l~  174 (391)
                      ..+|.+.|++++|++   ++|++|+.||.|++||+... ....+             .+|...|.+++|+|.  ++.+|+
T Consensus        39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~  116 (408)
T 4a11_B           39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPH--DTGMFT  116 (408)
T ss_dssp             CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTT--CTTCEE
T ss_pred             eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccC--CCcEEE
Confidence            446999999999974   69999999999999999432 21111             259999999999432  667999


Q ss_pred             EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES---RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       175 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      +++.||.|++||+.    .......+. +...+.++.+++.   +.++++|+.||.|++||+++                
T Consensus       117 s~~~d~~i~iwd~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~----------------  175 (408)
T 4a11_B          117 SSSFDKTLKVWDTN----TLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS----------------  175 (408)
T ss_dssp             EEETTSEEEEEETT----TTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS----------------
T ss_pred             EEeCCCeEEEeeCC----CCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC----------------
Confidence            99999999999965    234445544 6788999999984   45999999999999999976                


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCc-eeEEE----------------
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGG-MKSEI----------------  312 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~-~~~~~----------------  312 (391)
                                   ...+..+..|...|.+++|+|++  .+++++.||.|++||++++. ....+                
T Consensus       176 -------------~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (408)
T 4a11_B          176 -------------GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANT  242 (408)
T ss_dssp             -------------SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSC
T ss_pred             -------------cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccc
Confidence                         33566788899999999999765  48899999999999998775 33333                


Q ss_pred             ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-----cCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         313 VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-----KEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       313 ~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      .+...+.+++|+|++++|++++.||.|++||+++....   .....+     ...+. ..+.......+++++.|+.|++
T Consensus       243 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v  318 (408)
T 4a11_B          243 AHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT---LVNYGKVCNNSKKGLK-FTVSCGCSSEFVFVPYGSTIAV  318 (408)
T ss_dssp             SCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC---CCCCCCCCCCCSSCCC-CEECCSSSSCEEEEEETTEEEE
T ss_pred             cccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc---eeccccccccccccce-eEEecCCCceEEEEecCCEEEE
Confidence            12347999999999999999999999999999876522   111111     11122 2222223445777788999999


Q ss_pred             EecC
Q psy2107         388 WDLR  391 (391)
Q Consensus       388 wdlr  391 (391)
                      ||++
T Consensus       319 ~d~~  322 (408)
T 4a11_B          319 YTVY  322 (408)
T ss_dssp             EETT
T ss_pred             EECc
Confidence            9974

>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A

Probab=99.97  E-value=2.5e-29  Score=226.05  Aligned_cols=238  Identities=18%  Similarity=0.299  Sum_probs=194.3

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEecCCEEEEEECCCeEEEEcCC-
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRR-  144 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~-  144 (391)
                      ....|.++|+++++          .+.++.+.+|.......  .....+|...|.++++++..+++|+.|+.+++||.. 
T Consensus       151 ~sv~fspdg~~las----------gs~Dg~v~iWd~~~~~~--~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~  218 (420)
T 4gga_A          151 SSVAWIKEGNYLAV----------GTSSAEVQLWDVQQQKR--LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRV  218 (420)
T ss_dssp             EEEEECTTSSEEEE----------EETTSCEEEEETTTTEE--EEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTS
T ss_pred             EEEEECCCCCEEEE----------EECCCeEEEEEcCCCcE--EEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecc
Confidence            45688899988765          34678899998654322  345567999999999999999999999999999983 


Q ss_pred             -CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEE-
Q psy2107         145 -GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFAT-  221 (391)
Q Consensus       145 -~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~s-  221 (391)
                       ...+..+.+|...+..+.|   .+++.++++++.||.+++|+..........+.....|...|.+++|+|.+ .++++ 
T Consensus       219 ~~~~~~~~~~h~~~~~~~~~---~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~  295 (420)
T 4gga_A          219 AEHHVATLSGHSQEVCGLRW---APDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG  295 (420)
T ss_dssp             SSCEEEEEECCSSCEEEEEE---CTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred             cceeeEEecccccceeeeee---cCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence             4566678899999999999   77899999999999999999765544445567778899999999999965 45554 


Q ss_pred             -EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE--CCCe
Q psy2107         222 -GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS--WDHT  297 (391)
Q Consensus       222 -g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~--~dg~  297 (391)
                       |+.|+.|++||+.+++                             ....+.. ...+.++.|++ .+.+++++  .|+.
T Consensus       296 ~gs~D~~I~iwd~~t~~-----------------------------~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~  345 (420)
T 4gga_A          296 GGTSDRHIRIWNVCSGA-----------------------------CLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQ  345 (420)
T ss_dssp             ECTTTCEEEEEETTTTE-----------------------------EEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCC
T ss_pred             eecCCCEEEEEeCCccc-----------------------------cceeecc-ccceeeeeecCCCCeEEEEEecCCCE
Confidence             4579999999997733                             4445544 45678888884 45566654  7999


Q ss_pred             EEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         298 LKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       298 i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      |++||+.+++++.++.+|. .|.+++|+|+|++|++|+.|++|+|||+....
T Consensus       346 I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~  397 (420)
T 4gga_A          346 LVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD  397 (420)
T ss_dssp             EEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred             EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence            9999999999999999776 89999999999999999999999999987644

>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}

Probab=99.97  E-value=1.2e-28  Score=217.48  Aligned_cols=215  Identities=16%  Similarity=0.194  Sum_probs=169.7

Q ss_pred             CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         144 RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       144 ~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      ....+..+.+|.+.|++++|+|...++.+|++|+.||.|++||+..  ........+.+|...|.+++|+|++++|++|+
T Consensus        28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~  105 (368)
T 3mmy_A           28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS  105 (368)
T ss_dssp             TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--TSCEEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred             CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--CCceeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence            3456667889999999999944322269999999999999999763  22344477888999999999999999999999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe--ccCC-eEEEEECCCeEEE
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW--TAVD-EIITSSWDHTLKI  300 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~-~l~s~~~dg~i~i  300 (391)
                      .||.|++||+++++                              ...+..|...|.+++|  ++++ .+++++.|+.|++
T Consensus       106 ~dg~v~iwd~~~~~------------------------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~v  155 (368)
T 3mmy_A          106 CDKTAKMWDLSSNQ------------------------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKF  155 (368)
T ss_dssp             TTSEEEEEETTTTE------------------------------EEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred             CCCcEEEEEcCCCC------------------------------ceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEE
Confidence            99999999997632                              2235579999999999  6655 4999999999999


Q ss_pred             EecccCceeEEEECCeee------------------------------------------EEEEECCCCCE----EEEee
Q psy2107         301 WDAELGGMKSEIVGNKSF------------------------------------------FDVHYSPLSKL----VITAS  334 (391)
Q Consensus       301 wd~~~~~~~~~~~~~~~i------------------------------------------~~~~~~p~~~~----l~~g~  334 (391)
                      ||+++++.+..+..+..+                                          .++++.++...    +++|+
T Consensus       156 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (368)
T 3mmy_A          156 WDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS  235 (368)
T ss_dssp             ECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE
T ss_pred             EECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec
Confidence            999998887777654322                                          23333333332    89999


Q ss_pred             CCCcEEEEcCCCCCcceEEEEeccccC------------cEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         335 ADKQIRLYDPKVKEGAIVKSTFSSHKE------------WVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~------------~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .||.|++||++..........+.+|..            .|++++|+| ++.+|++++.||.|++||++
T Consensus       236 ~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~  303 (368)
T 3mmy_A          236 IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKD  303 (368)
T ss_dssp             TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred             CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECC
Confidence            999999999987643234556666765            799999999 56689999999999999974

>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}

Probab=99.97  E-value=9.6e-29  Score=221.30  Aligned_cols=229  Identities=8%  Similarity=0.069  Sum_probs=177.4

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCC-----CeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGG-----PVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      +|.+.|.+++|+  |++||+++.||.|++||.++ .+..+. |..     .|.+++|   +|++++|++|+.||+|++||
T Consensus        83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svaf---SPDG~~LAsgs~DGtVkIWd  157 (588)
T 2j04_A           83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEW---NPIESSIVVGNEDGELQFFS  157 (588)
T ss_dssp             SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEE---CSSSSCEEEEETTSEEEEEE
T ss_pred             CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEE---cCCCCEEEEEcCCCEEEEEE
Confidence            568899999999  67999999999999999755 555556 665     5999999   88999999999999999999


Q ss_pred             ecCCCC---ceeEEEEE----ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         187 WKVESN---SIECIHVC----RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       187 ~~~~~~---~~~~~~~~----~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      +.....   ....+..+    .+|...|.+++|+|+|  +++++.|+.|++||+..+..                     
T Consensus       158 ~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~---------------------  214 (588)
T 2j04_A          158 IRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH---------------------  214 (588)
T ss_dssp             CCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSS---------------------
T ss_pred             CCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc---------------------
Confidence            653211   11245666    5677899999999999  88999999999999976332                     


Q ss_pred             ccCCCCCceeee-cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE-ECCeeeEEEEE--CCCCCEEEEeeC
Q psy2107         260 SSASSRTPLITL-KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI-VGNKSFFDVHY--SPLSKLVITASA  335 (391)
Q Consensus       260 ~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~--~p~~~~l~~g~~  335 (391)
                           .....++ .+|...|.+++|+ ++.+++++ +++|++||+.+++..... .+...+..++|  +|++..+++++.
T Consensus       215 -----~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~e  287 (588)
T 2j04_A          215 -----QPVSRMIQNASRRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNK  287 (588)
T ss_dssp             -----CCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSS
T ss_pred             -----ccceeeecccccCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcC
Confidence                 1123456 4788999999999 67788887 799999999988774443 44458999999  999999999999


Q ss_pred             CCcEEEEcCCCCC---------------------cceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         336 DKQIRLYDPKVKE---------------------GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       336 dg~i~iwd~~~~~---------------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      ||. ++|....-.                     +. ....+. +...|.+++|+| +++++|+++.
T Consensus       288 dG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~-~l~~~~-~~~~I~~va~SP-dG~~lA~~~~  350 (588)
T 2j04_A          288 TSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWN-EFNNYE-TTLVIHGISLSP-DGYSIAIVYD  350 (588)
T ss_dssp             CEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTT-SSSSSC-CEEEEEEEEECT-TSSEEEEEEE
T ss_pred             CCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCC-ceeeec-cceEEEEEEECC-CCCEEEEEEe
Confidence            999 999863100                     00 011222 245699999999 6678888864

>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=5.8e-29  Score=239.22  Aligned_cols=211  Identities=20%  Similarity=0.355  Sum_probs=176.6

Q ss_pred             EeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC--CCEEEEEeCCC
Q psy2107         149 LNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES--RQQFATGGWDC  226 (391)
Q Consensus       149 ~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg  226 (391)
                      ..+.+|.+.|++++|   ++++.++++|+.||.|++||+.  ......+..+.+|.+.|.+++|+|+  +++|++|+.||
T Consensus         3 ~~l~gH~~~V~~l~~---s~dg~~latg~~dg~I~vwd~~--~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg   77 (753)
T 3jro_A            3 VIANAHNELIHDAVL---DYYGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG   77 (753)
T ss_dssp             -----CCCCEEEECC---CSSSCCEEEEETTTEEEEEEEE--TTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS
T ss_pred             eecccCcceeEEEEE---CCCCCeEEEEECCCcEEEEecC--CCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC
Confidence            356789999999999   7788999999999999999965  3456778889999999999999988  99999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC---CeEEEEECCCeEEEEec
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV---DEIITSSWDHTLKIWDA  303 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~l~s~~~dg~i~iwd~  303 (391)
                      .|++||+++++                           ......+.+|...|.+++|+|+   ..+++|+.||.|++||+
T Consensus        78 ~I~vwd~~~~~---------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl  130 (753)
T 3jro_A           78 KVLIWKEENGR---------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEF  130 (753)
T ss_dssp             CEEEEEEETTE---------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEC
T ss_pred             eEEEEECCCCc---------------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEe
Confidence            99999997632                           1256677889999999999964   57999999999999999


Q ss_pred             ccCc--eeEEEEC-CeeeEEEEECC-------------CCCEEEEeeCCCcEEEEcCCCCCcc-eEEEEeccccCcEEEE
Q psy2107         304 ELGG--MKSEIVG-NKSFFDVHYSP-------------LSKLVITASADKQIRLYDPKVKEGA-IVKSTFSSHKEWVQSV  366 (391)
Q Consensus       304 ~~~~--~~~~~~~-~~~i~~~~~~p-------------~~~~l~~g~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~  366 (391)
                      +++.  ....+.. ...+.+++|+|             ++.++++|+.||.|++||++..... .+...+.+|...|+++
T Consensus       131 ~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l  210 (753)
T 3jro_A          131 KENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV  210 (753)
T ss_dssp             CSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred             ecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence            8873  2333444 45899999999             5899999999999999999875432 4666788999999999


Q ss_pred             EECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         367 RWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       367 ~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+|++  +.++++++.||.|++||++
T Consensus       211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~  237 (753)
T 3jro_A          211 AWSPTVLLRSYLASVSQDRTCIIWTQD  237 (753)
T ss_dssp             EECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred             EeccCCCCCCEEEEEecCCEEEEecCC
Confidence            999953  7899999999999999974

>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A

Probab=99.97  E-value=3.5e-28  Score=213.40  Aligned_cols=280  Identities=12%  Similarity=0.119  Sum_probs=186.6

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEe--cCCEE-EEEECCCeEEEEc
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDF--HNDWI-LTGCYDHSVHIWT  142 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~~~~l-~t~~~dg~i~iwd  142 (391)
                      ...+|.++|+++++.           .+..+++|.......    ....+...+..+++  +++.+ ++|+.|++|++||
T Consensus        23 ~~v~fs~dg~~la~g-----------~~~~~~iw~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd   87 (355)
T 3vu4_A           23 TDYEFNQDQSCLILS-----------TLKSFEIYNVHPVAH----IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD   87 (355)
T ss_dssp             CEEEECTTSSEEEEE-----------CSSEEEEEEETTEEE----EEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred             EEEEECCCCCEEEEE-----------cCCEEEEEecCCcce----eeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence            557999999888752           233456776532211    11111113444444  46655 6788889999999


Q ss_pred             CC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE
Q psy2107         143 RR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT  221 (391)
Q Consensus       143 ~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s  221 (391)
                      .. +..+..+. +...|.+++|   +++  .++++ .|+.|++||+....   +.+..+..   +...+++++  .+++.
T Consensus        88 ~~~~~~~~~~~-~~~~v~~v~~---~~~--~~~~~-~~~~i~i~d~~~~~---~~~~~~~~---~~~~~~~s~--~~la~  152 (355)
T 3vu4_A           88 DVKKQDVSRIK-VDAPVKDLFL---SRE--FIVVS-YGDVISVFKFGNPW---KRITDDIR---FGGVCEFSN--GLLVY  152 (355)
T ss_dssp             TTTTEEEEEEE-CSSCEEEEEE---CSS--EEEEE-ETTEEEEEESSTTC---CBSSCCEE---EEEEEEEET--TEEEE
T ss_pred             CCCCcEEEEEE-CCCceEEEEE---cCC--EEEEE-EcCEEEEEECCCCc---eeeEEecc---CCceEEEEc--cEEEE
Confidence            94 55555554 7789999999   444  34443 48899999976331   11222222   344566677  56665


Q ss_pred             --EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc-eeeecCccCcccEEEeccCC-eEEEEECCCe
Q psy2107         222 --GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP-LITLKGHKEAISAVQWTAVD-EIITSSWDHT  297 (391)
Q Consensus       222 --g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~  297 (391)
                        |+.||.|++||++++..........              ......+ +..+.+|...|.+++|+|++ .|++|+.|++
T Consensus       153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~--------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~  218 (355)
T 3vu4_A          153 SNEFNLGQIHITKLQSSGSATTQDQGV--------------QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGT  218 (355)
T ss_dssp             EESSCTTCEEEEECCC--------------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCS
T ss_pred             eCCCcCcEEEEEECCCCCccccccccc--------------cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCC
Confidence              6889999999998644211000000              0001123 67889999999999999765 5999999998


Q ss_pred             -EEEEecccCceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE-------------------E
Q psy2107         298 -LKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK-------------------S  354 (391)
Q Consensus       298 -i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~-------------------~  354 (391)
                       |++||+++++.+..+.   +...|.+++|+|++++|++|+.|+.|++||++........                   .
T Consensus       219 ~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (355)
T 3vu4_A          219 IIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNF  298 (355)
T ss_dssp             EEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEE
T ss_pred             EEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEE
Confidence             9999999999999998   4558999999999999999999999999999754311100                   0


Q ss_pred             Ee-ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         355 TF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       355 ~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+ ..+......++|++ ++..+++++.||.+++|++
T Consensus       299 ~~~~~~~~~~~~~a~~~-d~~~l~~~~~dg~~~~~~~  334 (355)
T 3vu4_A          299 KLSVDKHVRGCKIAWIS-ESSLVVVWPHTRMIETFKV  334 (355)
T ss_dssp             ECCCCTTCCCCEEEESS-SSEEEEEETTTTEEEEEEE
T ss_pred             EeccCCCCCceEEEEeC-CCCEEEEEeCCCeEEEEEE
Confidence            01 11122346799999 6668999999999999986

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.97  E-value=3.2e-27  Score=210.36  Aligned_cols=254  Identities=11%  Similarity=0.100  Sum_probs=192.2

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEE-EEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecC
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      .++.+.+|......   ......+...+.+++|+  ++++ ++++.|+.|++||+. ++....+.. ...+.+++|   +
T Consensus        10 ~d~~v~v~d~~~~~---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~~~v~~~~~---s   82 (391)
T 1l0q_A           10 ESDNISVIDVTSNK---VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA-GSSPQGVAV---S   82 (391)
T ss_dssp             TTTEEEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-SSSEEEEEE---C
T ss_pred             CCCEEEEEECCCCe---EEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC-CCCccceEE---C
Confidence            45667777653221   12222344568999998  5555 677799999999995 444445544 448999999   7


Q ss_pred             CCCeEEE-EEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         168 GKDAAFI-SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       168 ~~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                      +++.+++ +++.++.|++||+.    ..+.+..+.. ...+.+++|+|+++.+ ++++.|+.|++||+.+++        
T Consensus        83 pdg~~l~~~~~~~~~v~v~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------  149 (391)
T 1l0q_A           83 PDGKQVYVTNMASSTLSVIDTT----SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA--------  149 (391)
T ss_dssp             TTSSEEEEEETTTTEEEEEETT----TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--------
T ss_pred             CCCCEEEEEECCCCEEEEEECC----CCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------
Confidence            7787665 55567999999954    2345555554 4578999999999977 688889999999997633        


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eE-EEEECCCeEEEEecccCceeEEEECCeeeEEEEE
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EI-ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY  323 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~  323 (391)
                                           ....+..+ ..+.+++|++++ .+ ++++.++.|++||+++++....+..+..+.+++|
T Consensus       150 ---------------------~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~  207 (391)
T 1l0q_A          150 ---------------------VINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV  207 (391)
T ss_dssp             ---------------------EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEE
T ss_pred             ---------------------EEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEE
Confidence                                 34445444 456899999766 45 5667899999999999999988888889999999


Q ss_pred             CCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         324 SPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       324 ~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|++++|++++   .++.|++||+++++   ....+..|. .+.+++|+|++..++++++.|+.|++||++
T Consensus       208 ~~~g~~l~~~~~~~~~~~v~~~d~~~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~  274 (391)
T 1l0q_A          208 NPEGTKAYVTNVDKYFNTVSMIDTGTNK---ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA  274 (391)
T ss_dssp             CTTSSEEEEEEECSSCCEEEEEETTTTE---EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             CCCCCEEEEEecCcCCCcEEEEECCCCe---EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence            99999998887   68999999998765   556666554 479999999665555888999999999974

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.97  E-value=1.7e-27  Score=215.02  Aligned_cols=272  Identities=15%  Similarity=0.132  Sum_probs=206.2

Q ss_pred             eeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC---CCcccCCCCcEEEEEec--CCEEEEEECCCeEEEE
Q psy2107          67 QFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS---PLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIW  141 (391)
Q Consensus        67 ~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iw  141 (391)
                      ...|.++++++.+.          ..++.+.+|.........   .....+|.+.|.+++|+  +.++++++.|+.|++|
T Consensus       127 ~~~~s~~~~~~~~~----------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~  196 (433)
T 3bws_A          127 SVRFIDNTRLAIPL----------LEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVF  196 (433)
T ss_dssp             CCEESSSSEEEEEB----------TTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEE
T ss_pred             EEEEeCCCeEEEEe----------CCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEE
Confidence            45666666666542          234567777654322111   11344799999999996  6699999999999999


Q ss_pred             cCC-CceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107         142 TRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF  219 (391)
Q Consensus       142 d~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l  219 (391)
                      |+. +.....+..|...+.+++|   ++++..+ ++++.|+.|++||++    ....+..+.. ...+.+++|+|+++++
T Consensus       197 d~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~i~~~d~~----~~~~~~~~~~-~~~~~~~~~~~~g~~l  268 (433)
T 3bws_A          197 DLKTLAYKATVDLTGKWSKILLY---DPIRDLVYCSNWISEDISVIDRK----TKLEIRKTDK-IGLPRGLLLSKDGKEL  268 (433)
T ss_dssp             ETTTCCEEEEEECSSSSEEEEEE---ETTTTEEEEEETTTTEEEEEETT----TTEEEEECCC-CSEEEEEEECTTSSEE
T ss_pred             ECCCceEEEEEcCCCCCeeEEEE---cCCCCEEEEEecCCCcEEEEECC----CCcEEEEecC-CCCceEEEEcCCCCEE
Confidence            994 5666777789999999999   5566666 555589999999964    3345555554 4569999999999999


Q ss_pred             EEEe--------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e-E
Q psy2107         220 ATGG--------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E-I  289 (391)
Q Consensus       220 ~sg~--------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~-l  289 (391)
                      ++++        .||.|++||+++++                             ....+ .|...+.+++|++++ . +
T Consensus       269 ~~~~~~~~~~~~~dg~i~~~d~~~~~-----------------------------~~~~~-~~~~~~~~~~~~~~g~~l~  318 (433)
T 3bws_A          269 YIAQFSASNQESGGGRLGIYSMDKEK-----------------------------LIDTI-GPPGNKRHIVSGNTENKIY  318 (433)
T ss_dssp             EEEEEESCTTCSCCEEEEEEETTTTE-----------------------------EEEEE-EEEECEEEEEECSSTTEEE
T ss_pred             EEEECCCCccccCCCeEEEEECCCCc-----------------------------EEeec-cCCCCcceEEECCCCCEEE
Confidence            9888        58899999997633                             22222 455678899999766 4 4


Q ss_pred             EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC---------------CCcEEEEcCCCCCcceEEE
Q psy2107         290 ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA---------------DKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~---------------dg~i~iwd~~~~~~~~~~~  354 (391)
                      ++++.|+.|++||+.+++....+.....+.+++|+|+++++++++.               ||.|++||+.+++   ...
T Consensus       319 ~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~---~~~  395 (433)
T 3bws_A          319 VSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT---VKE  395 (433)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE---EEE
T ss_pred             EEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc---EEE
Confidence            6668899999999999999988888788999999999998888876               5799999998765   555


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR  391 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr  391 (391)
                      .+.. ...+.+++|+| ++.+|++++ .|+.|++|++.
T Consensus       396 ~~~~-~~~~~~~~~s~-dg~~l~~~~~~d~~i~v~~~~  431 (433)
T 3bws_A          396 FWEA-GNQPTGLDVSP-DNRYLVISDFLDHQIRVYRRD  431 (433)
T ss_dssp             EEEC-SSSEEEEEECT-TSCEEEEEETTTTEEEEEEET
T ss_pred             EecC-CCCCceEEEcC-CCCEEEEEECCCCeEEEEEec
Confidence            5554 45799999999 455666665 59999999974

>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}

Probab=99.96  E-value=4.8e-27  Score=203.06  Aligned_cols=230  Identities=15%  Similarity=0.328  Sum_probs=180.5

Q ss_pred             EEEEEec-CCEEEEEECCCeEEEEcC-CCceEEe--ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         119 VSAIDFH-NDWILTGCYDHSVHIWTR-RGEHKLN--IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       119 V~~~~~~-~~~l~t~~~dg~i~iwd~-~~~~~~~--~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .++|+|+ +++||+| .|++|+|||+ +++.+..  +.+|...|++++|   ++++++|++|+.||+|++|+++    ..
T Consensus        28 ~~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~---~~~~~~l~sgs~Dg~v~iw~~~----~~   99 (318)
T 4ggc_A           28 LNLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAW---IKEGNYLAVGTSSAEVQLWDVQ----QQ   99 (318)
T ss_dssp             CBCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEE---CTTSSEEEEEETTSEEEEEETT----TT
T ss_pred             ceEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEE---CCCCCEEEEEECCCcEEEeecC----Cc
Confidence            5678998 4566665 5999999999 4555444  4578889999999   7789999999999999999964    44


Q ss_pred             eEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       195 ~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      +++..+.+|...+.++.+  ++..+++|+.++.+++|+.....                            ..+..+.+|
T Consensus       100 ~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~  149 (318)
T 4ggc_A          100 KRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAE----------------------------HHVATLSGH  149 (318)
T ss_dssp             EEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSS----------------------------CEEEEEECC
T ss_pred             eeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCc----------------------------eeEEEEcCc
Confidence            678888999998887665  45789999999999999986533                            356678899


Q ss_pred             cCcccEEEecc-CCeEEEEECCCeEEEEecccCcee----EEE-ECCeeeEEEEECCCCCE---EEEeeCCCcEEEEcCC
Q psy2107         275 KEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMK----SEI-VGNKSFFDVHYSPLSKL---VITASADKQIRLYDPK  345 (391)
Q Consensus       275 ~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~----~~~-~~~~~i~~~~~~p~~~~---l~~g~~dg~i~iwd~~  345 (391)
                      ...+..+.+.+ +..+++++.|+.|++||+++++..    ... .....+.+++++|++..   +++++.++.|++||.+
T Consensus       150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~  229 (318)
T 4ggc_A          150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC  229 (318)
T ss_dssp             SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred             cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence            99999999995 456999999999999999877532    222 23447899999998663   3467788999999987


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEE--eeCCCcEEEEecC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS--ASFDNSVKLWDLR  391 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s--~~~dg~v~iwdlr  391 (391)
                      ...   .. ....+...+..+.|+|.+.. +++  ++.||.|+|||++
T Consensus       230 ~~~---~~-~~~~~~~~v~~~~~~~~~~~-~~~~sg~~d~~i~iwd~~  272 (318)
T 4ggc_A          230 SGA---CL-SAVDAHSQVCSILWSPHYKE-LISGHGFAQNQLVIWKYP  272 (318)
T ss_dssp             TCC---EE-EEEECSSCEEEEEEETTTTE-EEEEECTTTCCEEEEETT
T ss_pred             ccc---cc-ccccceeeeeeeeecccccc-eEEEEEcCCCEEEEEECC
Confidence            755   33 33457778999999995554 444  3479999999974

>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A

Probab=99.96  E-value=9.3e-28  Score=202.07  Aligned_cols=176  Identities=15%  Similarity=0.122  Sum_probs=137.7

Q ss_pred             CCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC---CCeEE
Q psy2107         135 DHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE---RGLET  209 (391)
Q Consensus       135 dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~---~~v~~  209 (391)
                      |+.|++|++  +++.+..+..|...+..++|+|...++.+|++|+.|++|++||+.    +.+++.++.+|.   ..+.+
T Consensus       156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~----TGk~l~tL~g~~~~v~~v~~  231 (356)
T 2w18_A          156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLK----TGQLLKKMHIDDSYQASVCH  231 (356)
T ss_dssp             TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETT----TCCEEEEEECCC---CCCEE
T ss_pred             CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECC----CCcEEEEEcCCCcceeeeEE
Confidence            899999998  366777888899999999997754577899999999999999965    446777887643   46788


Q ss_pred             EEEcCCCCEE------------EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee-----c
Q psy2107         210 VTVSESRQQF------------ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL-----K  272 (391)
Q Consensus       210 l~~~~~~~~l------------~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  272 (391)
                      ++|+|+++++            ++|+.|++|++||..+++.                             +..+     .
T Consensus       232 vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~-----------------------------l~v~~~~~p~  282 (356)
T 2w18_A          232 KAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS-----------------------------VGVMLYCLPP  282 (356)
T ss_dssp             EEEEETTEEEEEEC------------CCEEEEEEETTTTEE-----------------------------EEEEEECCCT
T ss_pred             EEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE-----------------------------EEEEEeeccC
Confidence            8999999876            5688899999999987543                             2221     3


Q ss_pred             CccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeE-EEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         273 GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFF-DVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~-~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      +|...+.+..++ +..+++++.|++|+|||+.+++++.++.+|. .+. +++|+|+|++|++|+.|++|+|||+
T Consensus       283 Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~  355 (356)
T 2w18_A          283 GQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY  355 (356)
T ss_dssp             TCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred             CCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence            555444333433 4568899999999999999999999998765 344 6899999999999999999999985

>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A

Probab=99.96  E-value=4.2e-28  Score=215.95  Aligned_cols=241  Identities=12%  Similarity=0.072  Sum_probs=162.4

Q ss_pred             CccceEEEEEEeccCC---CCCCcccCCCCcEEEEEec----------CCEEEEEECCCeEEEEcC-CCceEEeccCCCC
Q psy2107          91 SSENVIDVEYLESTPT---PSPLDCILHDDWVSAIDFH----------NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGG  156 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~---~~~~~~~~h~~~V~~~~~~----------~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~  156 (391)
                      +.++.+++|.......   .....+.+|.+.|++++|+          +++||+|+.|++|+|||+ ++..+..+..|..
T Consensus       108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~  187 (393)
T 4gq1_A          108 CQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS  187 (393)
T ss_dssp             ETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSS
T ss_pred             eCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCC
Confidence            4688999998764322   1123467899999999995          469999999999999998 5667777888999


Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee---------------------EEEEEecCCCCeEEEEEc-C
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE---------------------CIHVCRGHERGLETVTVS-E  214 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~---------------------~~~~~~~~~~~v~~l~~~-~  214 (391)
                      +|.+++|+|.  +..+|++|+.||+|++||++.......                     ......+|...+.+++|+ +
T Consensus       188 ~v~~v~~~p~--~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~  265 (393)
T 4gq1_A          188 PGISVQFRPS--NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGS  265 (393)
T ss_dssp             CEEEEEEETT--EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETT
T ss_pred             CcEEEEECCC--CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecC
Confidence            9999999553  335899999999999999764321111                     111234678889999987 7


Q ss_pred             CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCe-EEEE
Q psy2107         215 SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDE-IITS  292 (391)
Q Consensus       215 ~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~-l~s~  292 (391)
                      +++.|++++.|+.+++||+..++...........          ...............+...+..+.+. .++. +++|
T Consensus       266 dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg  335 (393)
T 4gq1_A          266 DGSGILAMCKSGAWLRWNLFANNDYNEISDSTMK----------LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH  335 (393)
T ss_dssp             TTCEEEEECTTSEEEEEEC-----------------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred             CCCEEEEEeCCCCEEEEECccCCCCceEeeecCc----------cccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence            9999999999999999999875543221110000          00000011122233333334444443 3444 5667


Q ss_pred             ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcC
Q psy2107         293 SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDP  344 (391)
Q Consensus       293 ~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~  344 (391)
                      +.||.|++||+.+++...... ++.+|.+++|+|+|++||+++.+| +.+|.+
T Consensus       336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL  387 (393)
T 4gq1_A          336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL  387 (393)
T ss_dssp             TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred             CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence            789999999999988776655 455999999999999999998666 556653

>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}

Probab=99.95  E-value=4.7e-26  Score=205.62  Aligned_cols=234  Identities=10%  Similarity=0.060  Sum_probs=183.8

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEE-----eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKL-----NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~-----~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      ...+.+++|+  +.++++++.++.|++||+. ++...     .+.+|.+.|.+++|   ++++.++++++.|+.|++||+
T Consensus       122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~s~~~d~~v~~~d~  198 (433)
T 3bws_A          122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI---PEHNELWVSQMQANAVHVFDL  198 (433)
T ss_dssp             SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE---GGGTEEEEEEGGGTEEEEEET
T ss_pred             CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEE---cCCCEEEEEECCCCEEEEEEC
Confidence            3445578887  4477777888999999995 44444     34578899999999   668899999999999999996


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFAT-GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +    ....+..+..|...+.+++|+|+++.+++ ++.|+.|++||+++++                             
T Consensus       199 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~-----------------------------  245 (433)
T 3bws_A          199 K----TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKL-----------------------------  245 (433)
T ss_dssp             T----TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTE-----------------------------
T ss_pred             C----CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCc-----------------------------
Confidence            4    33566777789999999999999998854 4579999999997633                             


Q ss_pred             ceeeecCccCcccEEEeccCC-eEEEEE--------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE-EEeeCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVD-EIITSS--------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV-ITASAD  336 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~-~l~s~~--------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~g~~d  336 (391)
                      .+..+.. ...+.+++|+|++ .+++++        .|+.|++||+.+++....+.....+.+++|+|+++.+ ++++.+
T Consensus       246 ~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~  324 (433)
T 3bws_A          246 EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCC  324 (433)
T ss_dssp             EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTT
T ss_pred             EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCC
Confidence            3344443 3458899999766 577776        4889999999999888887666788999999999754 666889


Q ss_pred             CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC---------------CCcEEEEecC
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF---------------DNSVKLWDLR  391 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---------------dg~v~iwdlr  391 (391)
                      +.|++||+.+++   ....+. +...+.+++|+| ++.++++++.               ||.|++||++
T Consensus       325 ~~v~v~d~~~~~---~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~  389 (433)
T 3bws_A          325 SKIEVYDLKEKK---VQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT  389 (433)
T ss_dssp             TEEEEEETTTTE---EEEEEE-CSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred             CEEEEEECCCCc---EEEEec-CCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence            999999998654   444544 677899999999 5556666665               5799999973

>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3

Probab=99.95  E-value=2.5e-25  Score=198.12  Aligned_cols=220  Identities=12%  Similarity=0.088  Sum_probs=173.0

Q ss_pred             EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecCCC
Q psy2107         128 WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGHER  205 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~  205 (391)
                      ++++++.|+.|++||+. ++....+..| ..+.+++|   ++++.++ ++++.|+.|++||+.    ..+.+..+..+. 
T Consensus         4 l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~---s~dg~~l~~~~~~d~~i~v~d~~----~~~~~~~~~~~~-   74 (391)
T 1l0q_A            4 AYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVI---SPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-   74 (391)
T ss_dssp             EEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEE---CTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-
T ss_pred             EEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEE---CCCCCEEEEECCCCCeEEEEECC----CCeEEEEEECCC-
Confidence            67888999999999995 4555555555 45899999   7778765 677799999999954    335566666554 


Q ss_pred             CeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         206 GLETVTVSESRQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      .+.+++|+|++++|+.+ +.++.|++||+.+++                             .+..+.. ...+.+++|+
T Consensus        75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~-----------------------------~~~~~~~-~~~~~~~~~s  124 (391)
T 1l0q_A           75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT-----------------------------VAGTVKT-GKSPLGLALS  124 (391)
T ss_dssp             SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-----------------------------EEEEEEC-SSSEEEEEEC
T ss_pred             CccceEECCCCCEEEEEECCCCEEEEEECCCCe-----------------------------EEEEEeC-CCCcceEEEC
Confidence            89999999999987554 567999999997633                             3444443 4567999999


Q ss_pred             cCCe-E-EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107         285 AVDE-I-ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKE  361 (391)
Q Consensus       285 ~~~~-l-~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~  361 (391)
                      +++. + ++++.++.|++||+.+++.+..+..+..+.+++|+|+++++ ++++.++.|++||+++.+   ....+. +..
T Consensus       125 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~---~~~~~~-~~~  200 (391)
T 1l0q_A          125 PDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS---VIDTVK-VEA  200 (391)
T ss_dssp             TTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEE-CSS
T ss_pred             CCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe---EEEEEe-cCC
Confidence            7654 5 67778999999999999999999888888999999999987 577788999999998764   444443 566


Q ss_pred             cEEEEEECCCCCCEEEEee---CCCcEEEEecC
Q psy2107         362 WVQSVRWSPIDPQLFVSAS---FDNSVKLWDLR  391 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~~---~dg~v~iwdlr  391 (391)
                      .+.+++|+|+ +.++++++   .++.|++||++
T Consensus       201 ~~~~~~~~~~-g~~l~~~~~~~~~~~v~~~d~~  232 (391)
T 1l0q_A          201 APSGIAVNPE-GTKAYVTNVDKYFNTVSMIDTG  232 (391)
T ss_dssp             EEEEEEECTT-SSEEEEEEECSSCCEEEEEETT
T ss_pred             CccceEECCC-CCEEEEEecCcCCCcEEEEECC
Confidence            8999999994 45566665   78999999974

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.95  E-value=1.5e-25  Score=200.69  Aligned_cols=252  Identities=11%  Similarity=0.092  Sum_probs=189.0

Q ss_pred             eEEEEEE--eccCCCCCCcccCCCCcEEEEEec----------------CCEEEEEECC------CeEEEEcCCCceEEe
Q psy2107          95 VIDVEYL--ESTPTPSPLDCILHDDWVSAIDFH----------------NDWILTGCYD------HSVHIWTRRGEHKLN  150 (391)
Q Consensus        95 ~~~~~~~--~~~~~~~~~~~~~h~~~V~~~~~~----------------~~~l~t~~~d------g~i~iwd~~~~~~~~  150 (391)
                      .+++|..  ..........+.+|...+..+++.                +..++.++.+      +.|++||+++.....
T Consensus        94 ~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~  173 (415)
T 2hqs_A           94 AYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFV  173 (415)
T ss_dssp             EEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEE
T ss_pred             EEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEE
Confidence            6788876  433221123456677777776654                5667666654      799999998877888


Q ss_pred             ccCCCCCeeEEEEEecCCCCeEEEEEeCCC---cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCC
Q psy2107         151 IPGHGGPVKGVAWLYNDGKDAAFISVSTDQ---TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDC  226 (391)
Q Consensus       151 ~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg  226 (391)
                      +..|...+.+++|   +|+++.|++++.++   .|++||+.  +.  +. ..+..|...+.+++|+|+|+.|+ +++.++
T Consensus       174 l~~~~~~v~~~~~---Spdg~~la~~s~~~~~~~i~~~d~~--tg--~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g  245 (415)
T 2hqs_A          174 VHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLA--NG--AV-RQVASFPRHNGAPAFSPDGSKLAFALSKTG  245 (415)
T ss_dssp             EEEESSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEETT--TC--CE-EEEECCSSCEEEEEECTTSSEEEEEECTTS
T ss_pred             EeCCCCcceeeEE---cCCCCEEEEEEecCCCcEEEEEECC--CC--cE-EEeecCCCcccCEEEcCCCCEEEEEEecCC
Confidence            8889999999999   78899999999885   99999965  32  22 34567888999999999999887 666665


Q ss_pred             c--EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEEC-CC--eEEE
Q psy2107         227 L--LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSW-DH--TLKI  300 (391)
Q Consensus       227 ~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~-dg--~i~i  300 (391)
                      .  |++||+.+++                              ...+..|...+.+++|+|++. |++++. ++  .|.+
T Consensus       246 ~~~i~~~d~~~~~------------------------------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~  295 (415)
T 2hqs_A          246 SLNLYVMDLASGQ------------------------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK  295 (415)
T ss_dssp             SCEEEEEETTTCC------------------------------EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred             CceEEEEECCCCC------------------------------EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence            5  9999987522                              345667788899999997765 776765 44  6888


Q ss_pred             EecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         301 WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       301 wd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      ||+.+++..........+.+++|+|+|++|++++.+   ..|++||+.+++   . ..+..|. .+.+++|+| ++.+|+
T Consensus       296 ~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~---~-~~l~~~~-~~~~~~~sp-dg~~l~  369 (415)
T 2hqs_A          296 VNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---V-QVLSSTF-LDETPSLAP-NGTMVI  369 (415)
T ss_dssp             EETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---E-EECCCSS-SCEEEEECT-TSSEEE
T ss_pred             EECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC---E-EEecCCC-CcCCeEEcC-CCCEEE
Confidence            899887754333334578899999999999988764   589999998765   3 3455554 899999999 556677


Q ss_pred             EeeCCC---cEEEEec
Q psy2107         378 SASFDN---SVKLWDL  390 (391)
Q Consensus       378 s~~~dg---~v~iwdl  390 (391)
                      +++.|+   .|++||+
T Consensus       370 ~~s~~~~~~~l~~~d~  385 (415)
T 2hqs_A          370 YSSSQGMGSVLNLVST  385 (415)
T ss_dssp             EEEEETTEEEEEEEET
T ss_pred             EEEcCCCccEEEEEEC
Confidence            777766   7999986

>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A

Probab=99.92  E-value=3.7e-22  Score=178.60  Aligned_cols=232  Identities=10%  Similarity=0.051  Sum_probs=177.8

Q ss_pred             ceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCC---eEEEEcCCCceEEeccCCCCCeeEEEEEecCC
Q psy2107          94 NVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDH---SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG  168 (391)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~  168 (391)
                      ..+.+|...   ......+.+|...|.+++|+  |+.|++++.++   .|++||+.+.....+..|...+.+++|   +|
T Consensus       159 ~~i~i~d~~---g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~---sp  232 (415)
T 2hqs_A          159 YELRVSDYD---GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SP  232 (415)
T ss_dssp             EEEEEEETT---SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE---CT
T ss_pred             ceEEEEcCC---CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEE---cC
Confidence            566666653   22345566799999999998  66999999885   999999966666677788899999999   77


Q ss_pred             CCeEEE-EEeCCCc--EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCCCCCC
Q psy2107         169 KDAAFI-SVSTDQT--AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DC--LLKIWSADISKERGDP  242 (391)
Q Consensus       169 ~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg--~i~iwd~~~~~~~~~~  242 (391)
                      +++.|+ +++.++.  |++||+.  +..   ...+..|...+.+++|+|+++.|++++. ++  .|.+||+.+++     
T Consensus       233 dg~~la~~~~~~g~~~i~~~d~~--~~~---~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~-----  302 (415)
T 2hqs_A          233 DGSKLAFALSKTGSLNLYVMDLA--SGQ---IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA-----  302 (415)
T ss_dssp             TSSEEEEEECTTSSCEEEEEETT--TCC---EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC-----
T ss_pred             CCCEEEEEEecCCCceEEEEECC--CCC---EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC-----
Confidence            888777 6666665  7888854  322   2456678889999999999999988886 45  57777876532     


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC---CeEEEEecccCceeEEEECCeee
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD---HTLKIWDAELGGMKSEIVGNKSF  318 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~i  318 (391)
                                               ...+..+...+.+++|+|++. |++++.+   ..|++||+.+++.. .+..+..+
T Consensus       303 -------------------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~  356 (415)
T 2hqs_A          303 -------------------------PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLD  356 (415)
T ss_dssp             -------------------------CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSC
T ss_pred             -------------------------EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCc
Confidence                                     223445667788999997665 6666653   58999999988774 34444588


Q ss_pred             EEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         319 FDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      .+++|+|+|++|++++.++   .|++||+...    ....+.+|.+.|.+++|+|.
T Consensus       357 ~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~----~~~~l~~~~~~v~~~~~~~~  408 (415)
T 2hqs_A          357 ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR----FKARLPATDGQVKFPAWSPY  408 (415)
T ss_dssp             EEEEECTTSSEEEEEEEETTEEEEEEEETTSC----CEEECCCSSSEEEEEEECCC
T ss_pred             CCeEEcCCCCEEEEEEcCCCccEEEEEECCCC----cEEEeeCCCCCCcCCccccc
Confidence            9999999999999888777   7999998643    35678889999999999993

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.91  E-value=4e-23  Score=185.52  Aligned_cols=223  Identities=13%  Similarity=0.117  Sum_probs=155.3

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-------CCceeEE----EEEecCC
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-------SNSIECI----HVCRGHE  204 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-------~~~~~~~----~~~~~~~  204 (391)
                      +.+++|+....      .....+..+++   ++++.++++++.|+ +++|+....       .......    .....+.
T Consensus        23 ~~vri~~~~~~------~~~~~~n~lav---s~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (434)
T 2oit_A           23 KKVRIFDSPEE------LPKERSSLLAV---SNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMK   92 (434)
T ss_dssp             CEEECSCCCSS------CCCSCCBCEEE---ETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCS
T ss_pred             eeEEecCCccc------cCCCCccEEEE---ecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCC
Confidence            56888775322      12446788999   55677899999888 888874310       0000100    0112356


Q ss_pred             CCeEEEEEcCCCCEEE----EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107         205 RGLETVTVSESRQQFA----TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA  280 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~----sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  280 (391)
                      ..|.+++|+|++++|+    +|+.|+.|++||+++......                  ...........+.+|...|.+
T Consensus        93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~------------------~~~~~~~~~~~~~~h~~~V~~  154 (434)
T 2oit_A           93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK------------------QQKRPFAYHKLLKDAGGMVID  154 (434)
T ss_dssp             SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC------------------SSCCCSEEEECCCSGGGSEEE
T ss_pred             CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc------------------CCcceeeeeeccCCCCCceEE
Confidence            7899999999999999    788999999999865310000                  000001124456679999999


Q ss_pred             EEeccC--CeEEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         281 VQWTAV--DEIITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       281 ~~~~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      ++|+|.  ..|++++.||+|++||++++........+ ..+.+++|+|+|++|++|+.||.|++||++ +.   ....+.
T Consensus       155 v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~---~~~~~~  230 (434)
T 2oit_A          155 MKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ---EKKVIP  230 (434)
T ss_dssp             EEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC---EEEEEC
T ss_pred             EEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc---cccccc
Confidence            999964  46999999999999999998766555544 489999999999999999999999999987 33   223333


Q ss_pred             c-------ccCcEEEEEECCCCCCEE-EEeeCCCc------EEEEecC
Q psy2107         358 S-------HKEWVQSVRWSPIDPQLF-VSASFDNS------VKLWDLR  391 (391)
Q Consensus       358 ~-------h~~~v~~~~~~~~~~~~l-~s~~~dg~------v~iwdlr  391 (391)
                      .       |...|.+++|++ +..++ ++++.||.      +++|+++
T Consensus       231 ~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~  277 (434)
T 2oit_A          231 CPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLP  277 (434)
T ss_dssp             CCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred             CCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEec
Confidence            2       234899999999 44444 34445543      8899985

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=9.7e-22  Score=171.49  Aligned_cols=264  Identities=8%  Similarity=0.114  Sum_probs=175.4

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECC-CeEEEEcCC--Cce---EEeccCCCCCeeEEEE
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYD-HSVHIWTRR--GEH---KLNIPGHGGPVKGVAW  163 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~d-g~i~iwd~~--~~~---~~~~~~~~~~v~~l~~  163 (391)
                      .++.+.+|...............|...+.+++|+  +++|++++.+ +.|.+|+++  +..   +..+..+ ..+..++|
T Consensus        13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~   91 (343)
T 1ri6_A           13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHIST   91 (343)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEE
T ss_pred             CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEE
Confidence            3566777766421111223334577788889997  6688888876 999999985  322   2233333 37889999


Q ss_pred             EecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC-CCCCC
Q psy2107         164 LYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADI-SKERG  240 (391)
Q Consensus       164 ~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~-~~~~~  240 (391)
                         +++++++++++. ++.|.+||+. ..........+.. ...+.+++|+|+++++++++ .++.|.+||+.+ ++.  
T Consensus        92 ---s~dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~--  164 (343)
T 1ri6_A           92 ---DHQGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL--  164 (343)
T ss_dssp             ---CTTSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE--
T ss_pred             ---cCCCCEEEEEecCCCeEEEEECC-CCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce--
Confidence               778887766654 8899999975 2223344455544 34689999999999888887 899999999975 221  


Q ss_pred             CCCCCCCCCccccccccccccCCCCCcee--eec-CccCcccEEEeccCCe-EEEEE-CCCeEEEEeccc--Cce--eEE
Q psy2107         241 DPSENGDEGTTSKKRKKEYSSASSRTPLI--TLK-GHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAEL--GGM--KSE  311 (391)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~--~~~--~~~  311 (391)
                                               ....  ... .....+..++|+|++. +++++ .++.|.+||+..  ++.  ...
T Consensus       165 -------------------------~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~  219 (343)
T 1ri6_A          165 -------------------------VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQT  219 (343)
T ss_dssp             -------------------------EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEE
T ss_pred             -------------------------eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEee
Confidence                                     0111  122 2234677899997765 55554 789999999953  433  222


Q ss_pred             EE---C----CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEee-C
Q psy2107         312 IV---G----NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-F  381 (391)
Q Consensus       312 ~~---~----~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~  381 (391)
                      ..   .    ...+..++|+|++++|++ +..++.|.+||+..... ...+..+..+.. +.+++|+|++ .+|++++ .
T Consensus       220 ~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~  297 (343)
T 1ri6_A          220 LDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQK  297 (343)
T ss_dssp             EECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTS-SEEEEECTT
T ss_pred             ccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCC-CEEEEecCC
Confidence            22   1    124668999999998774 44789999999873221 224444444444 8999999955 4455554 7


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      ++.|.+|++
T Consensus       298 ~~~v~v~~~  306 (343)
T 1ri6_A          298 SHHISVYEI  306 (343)
T ss_dssp             TCEEEEEEE
T ss_pred             CCeEEEEEE
Confidence            899999954

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.90  E-value=1.1e-21  Score=167.40  Aligned_cols=250  Identities=14%  Similarity=0.103  Sum_probs=178.6

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCC-c-eEEeccCC-CCCeeEEEEEec
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRG-E-HKLNIPGH-GGPVKGVAWLYN  166 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-~-~~~~~~~~-~~~v~~l~~~~~  166 (391)
                      .+..+.+|....   .....+..|...|.+++|+  +++|++++ ++.|++||+.+ . .......+ ...+.+++|   
T Consensus        20 ~~~~i~~~d~~~---~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~---   92 (297)
T 2ojh_A           20 MRSSIEIFNIRT---RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI---   92 (297)
T ss_dssp             CCEEEEEEETTT---TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE---
T ss_pred             cceeEEEEeCCC---CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE---
Confidence            456666665432   1233455688899999998  66888876 78999999955 4 44344444 477899999   


Q ss_pred             CCCCeEEEEEe--CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCC
Q psy2107         167 DGKDAAFISVS--TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPS  243 (391)
Q Consensus       167 ~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~  243 (391)
                      ++++.++++++  .++...+|.++.....   ...+.. ...+.+++|+|+++.|+ +++.++.+++|+++...      
T Consensus        93 spdg~~l~~~~~~~~~~~~l~~~~~~~~~---~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~------  162 (297)
T 2ojh_A           93 SPDGALYAISDKVEFGKSAIYLLPSTGGT---PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS------  162 (297)
T ss_dssp             CTTSSEEEEEECTTTSSCEEEEEETTCCC---CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTT------
T ss_pred             CCCCCEEEEEEeCCCCcceEEEEECCCCc---eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCC------
Confidence            77899999998  4567888877654433   233333 33589999999999887 78889999999975311      


Q ss_pred             CCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEE-CCCeEEEEecc-cCceeEEEECC-eeeE
Q psy2107         244 ENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE-LGGMKSEIVGN-KSFF  319 (391)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~-~~~~~~~~~~~-~~i~  319 (391)
                                            .....+..+...+.+++|+|++. ++.++ .++.+++|++. .+.....+..+ ..+.
T Consensus       163 ----------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  220 (297)
T 2ojh_A          163 ----------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDW  220 (297)
T ss_dssp             ----------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEE
T ss_pred             ----------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccC
Confidence                                  12345556778899999997665 55555 58999999986 45555555443 4788


Q ss_pred             EEEECCCCCEEEEeeCC-----------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         320 DVHYSPLSKLVITASAD-----------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       320 ~~~~~p~~~~l~~g~~d-----------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      .++|+|++++|++++.+           +.|++||+..++.. .+..+.+|...+.+++|+|++ ..|++++.|
T Consensus       221 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~  292 (297)
T 2ojh_A          221 FPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE-TLFDLFGGQGTMNSPNWSPDG-DEFAYVRYF  292 (297)
T ss_dssp             EEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCE-EEEEEEESTTTSCSCCBCTTS-SEEEEEEEC
T ss_pred             CeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCce-eeeccCCCCcccccceECCCC-CEEEEEEec
Confidence            99999999999888765           56999999876522 344455788899999999954 556666554

>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1

Probab=99.90  E-value=4.2e-21  Score=167.46  Aligned_cols=233  Identities=8%  Similarity=0.169  Sum_probs=162.8

Q ss_pred             EEEEEECCCeEEEEcCC--Cc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC-CcEEEEeecCCCCceeEEEEEecC
Q psy2107         128 WILTGCYDHSVHIWTRR--GE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-QTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~--~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      ++++++.|+.|++|+++  +. .......+...+.+++|   +++++++++++.+ +.|.+|+++........+..+..+
T Consensus         7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~   83 (343)
T 1ri6_A            7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVV---SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP   83 (343)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEE---CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS
T ss_pred             EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEE---CCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC
Confidence            34455789999999984  32 22333457788999999   7788888888876 999999986445555566666654


Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      . .+..++|+|++++|++++. ++.|.+||+..+..                          ......+.. ...+.+++
T Consensus        84 ~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--------------------------~~~~~~~~~-~~~~~~~~  135 (343)
T 1ri6_A           84 G-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP--------------------------VGVVDVVEG-LDGCHSAN  135 (343)
T ss_dssp             S-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE--------------------------EEEEEEECC-CTTBCCCE
T ss_pred             C-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcc--------------------------ccccccccC-CCCceEEE
Confidence            4 7899999999998877665 88899999942111                          122333333 34588899


Q ss_pred             eccCC-eEEEEE-CCCeEEEEeccc-CceeE----EEE--CCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcce-
Q psy2107         283 WTAVD-EIITSS-WDHTLKIWDAEL-GGMKS----EIV--GNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAI-  351 (391)
Q Consensus       283 ~~~~~-~l~s~~-~dg~i~iwd~~~-~~~~~----~~~--~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~-  351 (391)
                      |+|++ .+++++ .++.|++||+.+ ++...    ...  ....+..++|+|++++++++ ..++.|.+|++....+.. 
T Consensus       136 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~  215 (343)
T 1ri6_A          136 ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE  215 (343)
T ss_dssp             ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred             ECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence            99766 477766 899999999987 65432    222  23467889999999977655 478999999986422211 


Q ss_pred             EEEEec---cc---cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         352 VKSTFS---SH---KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       352 ~~~~~~---~h---~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ......   ..   ...+.+++|+|++..+++++..++.|.+||++
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~  261 (343)
T 1ri6_A          216 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS  261 (343)
T ss_dssp             EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred             EEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence            122221   11   24577899999665555577789999999974

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.89  E-value=8e-21  Score=175.19  Aligned_cols=226  Identities=11%  Similarity=0.066  Sum_probs=169.9

Q ss_pred             cCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         125 HNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       125 ~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      .+.++++++.|++|.+||. +++.+..+..+.. +..++|   +++++++++++.|++|.+||+.  ..+.+.+..+. +
T Consensus       148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~---spdg~~l~v~~~d~~V~v~D~~--~~t~~~~~~i~-~  220 (543)
T 1nir_A          148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRM---SASGRYLLVIGRDARIDMIDLW--AKEPTKVAEIK-I  220 (543)
T ss_dssp             GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEE---CTTSCEEEEEETTSEEEEEETT--SSSCEEEEEEE-C
T ss_pred             CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEE---CCCCCEEEEECCCCeEEEEECc--CCCCcEEEEEe-c
Confidence            3668889999999999999 4566666663323 889999   8899999999999999999962  12345667776 4


Q ss_pred             CCCeEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-----
Q psy2107         204 ERGLETVTVSE----SRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-----  273 (391)
Q Consensus       204 ~~~v~~l~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  273 (391)
                      ...+..++|+|    +++++++++. ++.|.+||..+.+                             ++..+..     
T Consensus       221 g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~-----------------------------~~~~i~~~g~~~  271 (543)
T 1nir_A          221 GIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE-----------------------------PKQIVSTRGMTV  271 (543)
T ss_dssp             CSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC-----------------------------EEEEEECCEECS
T ss_pred             CCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc-----------------------------cceeecccCccc
Confidence            55689999999    9999999884 8999999987643                             3333332     


Q ss_pred             -----c-cCcccEEEeccC-Ce-EEEEECCCeEEEEecccCceeE--EEECCeeeEEEEECCCCCEEEEe-eCCCcEEEE
Q psy2107         274 -----H-KEAISAVQWTAV-DE-IITSSWDHTLKIWDAELGGMKS--EIVGNKSFFDVHYSPLSKLVITA-SADKQIRLY  342 (391)
Q Consensus       274 -----~-~~~v~~~~~~~~-~~-l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iw  342 (391)
                           | ...+..+.++++ .. +++...++.|.+||+.+.+.+.  .+.....+..++|+|+|++++++ ..++.|.+|
T Consensus       272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~  351 (543)
T 1nir_A          272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVI  351 (543)
T ss_dssp             SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEE
Confidence                 2 236788999964 34 5666789999999998876554  55555567889999999977655 468999999


Q ss_pred             cCCCCCcceEEEEecc----ccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107         343 DPKVKEGAIVKSTFSS----HKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       343 d~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                      |+.+++   +...+..    |.+....+ ++|+++.+++|+. .|++|.+||+
T Consensus       352 D~~tg~---l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~  400 (543)
T 1nir_A          352 DSKDRR---LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGT  400 (543)
T ss_dssp             ETTTTE---EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred             ECCCCe---EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEe
Confidence            998765   5555543    65444443 5776677788876 6899999996

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.89  E-value=7.5e-22  Score=190.27  Aligned_cols=231  Identities=8%  Similarity=0.027  Sum_probs=170.4

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      .|.+++|+  |++|++++. +.|++||+.+.   ....+..|...+.+++|   +|++++|+.++ ++.|++||+.  +.
T Consensus       110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~---SPDG~~la~~~-~~~i~~~d~~--~g  182 (741)
T 2ecf_A          110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKL---SPKGGFVSFIR-GRNLWVIDLA--SG  182 (741)
T ss_dssp             ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEE---CTTSSEEEEEE-TTEEEEEETT--TT
T ss_pred             CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccC---CCCCCEEEEEe-CCcEEEEecC--CC
Confidence            47788888  668888886 99999999766   67778888899999999   88899999887 5689999954  22


Q ss_pred             ceeEEEEEecCCCC----------------eEEEEEcCCCCEEEEEeCCC------------------------------
Q psy2107         193 SIECIHVCRGHERG----------------LETVTVSESRQQFATGGWDC------------------------------  226 (391)
Q Consensus       193 ~~~~~~~~~~~~~~----------------v~~l~~~~~~~~l~sg~~dg------------------------------  226 (391)
                        ........+...                +.+++|+|+|++|++++.|+                              
T Consensus       183 --~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~  260 (741)
T 2ecf_A          183 --RQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN  260 (741)
T ss_dssp             --EEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred             --CEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence              222222223222                47899999999999988765                              


Q ss_pred             ---cEEEEECCC-CCCCCCCCCCCCCCccccccccccccCCCCCceeee--cCccCcccEEEeccCCe-EEEEEC-----
Q psy2107         227 ---LLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL--KGHKEAISAVQWTAVDE-IITSSW-----  294 (391)
Q Consensus       227 ---~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~-l~s~~~-----  294 (391)
                         .|.+||+.+ ++.                             ....  ..|...+..++| |++. |++++.     
T Consensus       261 ~~~~l~~~d~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~  310 (741)
T 2ecf_A          261 VQVKLGVISPAEQAQT-----------------------------QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQK  310 (741)
T ss_dssp             CEEEEEEECSSTTCCC-----------------------------EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSS
T ss_pred             CeeEEEEEECCCCCce-----------------------------EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCC
Confidence               667777654 332                             1111  146778899999 8876 555443     


Q ss_pred             CCeEEEEecccCceeEEEECCe-----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE-EE
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNK-----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV-RW  368 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~-----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~-~~  368 (391)
                      +..|++||+.+++....+..+.     .+..++|+|+|+++++++.+|.++||.+.....   ...+..|...|..+ .|
T Consensus       311 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~---~~~l~~~~~~v~~~~~~  387 (741)
T 2ecf_A          311 KLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK---AAALTHGNWSVDELLAV  387 (741)
T ss_dssp             EEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC---EEESCCSSSCEEEEEEE
T ss_pred             eEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC---eeeeeecceEEEeEeEE
Confidence            5789999999998776665433     346899999999999999999888887653322   45677788888887 59


Q ss_pred             CCCCCCEEEEeeCCC--cEEEEec
Q psy2107         369 SPIDPQLFVSASFDN--SVKLWDL  390 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg--~v~iwdl  390 (391)
                      +|++..++++++.++  .++||++
T Consensus       388 s~dg~~l~~~~~~~~~~~~~l~~~  411 (741)
T 2ecf_A          388 DEKAGLAYFRAGIESARESQIYAV  411 (741)
T ss_dssp             ETTTTEEEEEECSSCTTCBEEEEE
T ss_pred             eCCCCEEEEEEeCCCCceEEEEEE
Confidence            996655556677666  8999985

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.89  E-value=1.4e-20  Score=163.42  Aligned_cols=242  Identities=8%  Similarity=0.024  Sum_probs=166.4

Q ss_pred             CCCcEEEEEec--CCEEEEEEC-CCeEEEEcCCC-ce-EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC---cEEEEe
Q psy2107         115 HDDWVSAIDFH--NDWILTGCY-DHSVHIWTRRG-EH-KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ---TAMIWE  186 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~-dg~i~iwd~~~-~~-~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg---~v~iwd  186 (391)
                      +...+ +++|+  ++++++++. ++.|.+||... .. ...+..+..+..+++|   ++++++++++..++   .|.+||
T Consensus        39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~i~v~d  114 (331)
T 3u4y_A           39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDI---TPDDQFAVTVTGLNHPFNMQSYS  114 (331)
T ss_dssp             CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEE---CTTSSEEEECCCSSSSCEEEEEE
T ss_pred             cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEE---CCCCCEEEEecCCCCcccEEEEE
Confidence            44556 88887  565666555 89999999944 43 5556666666666999   77898888655553   899999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEE-EeCCCc-EEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFAT-GGWDCL-LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +.    ..+.+..+.. .....+++|+|+++++++ ...++. |.+|+++......                       .
T Consensus       115 ~~----~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~-----------------------~  166 (331)
T 3u4y_A          115 FL----KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF-----------------------D  166 (331)
T ss_dssp             TT----TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE-----------------------E
T ss_pred             CC----CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe-----------------------e
Confidence            54    2344555554 445789999999985554 456688 9999997422100                       0


Q ss_pred             CCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCce---eEEEECCeeeEEEEECCCCCEEEEee-CCCc
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGM---KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQ  338 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~---~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~  338 (391)
                      . ....+ ........++|+|++. ++++ ..++.|++||+.+++.   +..+.....+..++|+|+|+++++++ .++.
T Consensus       167 ~-~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~  244 (331)
T 3u4y_A          167 T-GQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVD  244 (331)
T ss_dssp             E-EEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEE
T ss_pred             c-CCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCE
Confidence            0 01111 2344578999997774 5554 4689999999999998   88888777888999999999776554 5788


Q ss_pred             EEEEcCCCCCcceEEEEeccc----c---CcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSH----K---EWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h----~---~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |.+||+.+++... +..+..+    .   .....++|+|++..+++++..++.|.+||+.
T Consensus       245 i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~  303 (331)
T 3u4y_A          245 VFNFNQLSGTLSF-VKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS  303 (331)
T ss_dssp             EEEEETTTTEEEE-EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             EEEEECCCCceee-ecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence            9999998755211 2222222    2   2235689999665555666777899999973

>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}

Probab=99.89  E-value=1.7e-21  Score=166.14  Aligned_cols=221  Identities=14%  Similarity=0.084  Sum_probs=159.1

Q ss_pred             EECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEE
Q psy2107         132 GCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETV  210 (391)
Q Consensus       132 ~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l  210 (391)
                      ++.|+.|++||+.+.....+..|...|.+++|   ++++.+|++++ ++.|.+||+... .  ........+ ...+.++
T Consensus        18 ~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~---spdg~~l~~~~-~~~i~~~d~~~~-~--~~~~~~~~~~~~~~~~~   90 (297)
T 2ojh_A           18 GSMRSSIEIFNIRTRKMRVVWQTPELFEAPNW---SPDGKYLLLNS-EGLLYRLSLAGD-P--SPEKVDTGFATICNNDH   90 (297)
T ss_dssp             CCCCEEEEEEETTTTEEEEEEEESSCCEEEEE---CTTSSEEEEEE-TTEEEEEESSSC-C--SCEECCCTTCCCBCSCC
T ss_pred             CCcceeEEEEeCCCCceeeeccCCcceEeeEE---CCCCCEEEEEc-CCeEEEEeCCCC-C--CceEeccccccccccce
Confidence            45789999999977777777789999999999   77899999877 889999996520 2  223333444 4678999


Q ss_pred             EEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe
Q psy2107         211 TVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE  288 (391)
Q Consensus       211 ~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  288 (391)
                      +|+|++++|++++  .++...+|.++...                           . ....+..+ ..+..++|+|++.
T Consensus        91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~---------------------------~-~~~~~~~~-~~~~~~~~spdg~  141 (297)
T 2ojh_A           91 GISPDGALYAISDKVEFGKSAIYLLPSTG---------------------------G-TPRLMTKN-LPSYWHGWSPDGK  141 (297)
T ss_dssp             EECTTSSEEEEEECTTTSSCEEEEEETTC---------------------------C-CCEECCSS-SSEEEEEECTTSS
T ss_pred             EECCCCCEEEEEEeCCCCcceEEEEECCC---------------------------C-ceEEeecC-CCccceEECCCCC
Confidence            9999999999998  44566666654211                           1 12223323 3478889997664


Q ss_pred             -EE-EEECCCeEEEEecc--cCceeEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         289 -II-TSSWDHTLKIWDAE--LGGMKSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       289 -l~-s~~~dg~i~iwd~~--~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                       ++ +++.++.+++|++.  ++...........+.+++|+|++++|+.++ .++.+++|++.....  ....+..|...+
T Consensus       142 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~  219 (297)
T 2ojh_A          142 SFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS--SVERITDSAYGD  219 (297)
T ss_dssp             EEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS--CEEECCCCSEEE
T ss_pred             EEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC--CcEEEecCCccc
Confidence             54 67889999999864  344433333445789999999999887766 588999998763221  345667788889


Q ss_pred             EEEEECCCCCCEEEEeeCC-----------CcEEEEecC
Q psy2107         364 QSVRWSPIDPQLFVSASFD-----------NSVKLWDLR  391 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~d-----------g~v~iwdlr  391 (391)
                      .+++|+| ++.+|++++.+           +.|++||++
T Consensus       220 ~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~  257 (297)
T 2ojh_A          220 WFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDMD  257 (297)
T ss_dssp             EEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEETT
T ss_pred             CCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEecC
Confidence            9999999 55667776655           569999873

>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A

Probab=99.89  E-value=1e-21  Score=176.38  Aligned_cols=196  Identities=11%  Similarity=0.085  Sum_probs=147.3

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCC-----------ceEEe-----ccCCCCCeeEEEEEecCCCCeEEE----E
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRG-----------EHKLN-----IPGHGGPVKGVAWLYNDGKDAAFI----S  175 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~-----------~~~~~-----~~~~~~~v~~l~~~~~~~~~~~l~----s  175 (391)
                      .++.++++  +.++++++.|| +++|+...           .....     ...+...|.+++|   ++++.+|+    +
T Consensus        38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---spdg~~lav~~~s  113 (434)
T 2oit_A           38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL---SCDNLTLSACMMS  113 (434)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE---CTTSCEEEEEEEE
T ss_pred             CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE---cCCCCEEEEEEec
Confidence            45666766  67999999888 88876410           11111     1235678999999   77889998    7


Q ss_pred             EeCCCcEEEEeecCCC-------CceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         176 VSTDQTAMIWEWKVES-------NSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       176 ~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      |+.|+.|++||+....       .....+..+.+|...|.+++|+|+ +.+|++++.||.|++||++++           
T Consensus       114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-----------  182 (434)
T 2oit_A          114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-----------  182 (434)
T ss_dssp             TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-----------
T ss_pred             cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-----------
Confidence            8899999999975320       112235666789999999999997 889999999999999999763           


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEECC--------eee
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVGN--------KSF  318 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~i  318 (391)
                                        .......+|...|.+++|+|++ .|++|+.||.|++||++ ++....+..+        ..+
T Consensus       183 ------------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v  243 (434)
T 2oit_A          183 ------------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRV  243 (434)
T ss_dssp             ------------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEE
T ss_pred             ------------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeE
Confidence                              2344455788999999999655 59999999999999998 5655555432        278


Q ss_pred             EEEEECCCCCEEEEe-eCCC------cEEEEcCCCC
Q psy2107         319 FDVHYSPLSKLVITA-SADK------QIRLYDPKVK  347 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g-~~dg------~i~iwd~~~~  347 (391)
                      .+++|++++.++++. +.+|      .+++|+++..
T Consensus       244 ~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~  279 (434)
T 2oit_A          244 LDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK  279 (434)
T ss_dssp             EEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred             EEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence            999999988877543 3343      3899999765

>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*

Probab=99.89  E-value=1.2e-20  Score=174.03  Aligned_cols=258  Identities=12%  Similarity=0.084  Sum_probs=183.4

Q ss_pred             ccceEEEEEEeccCCCCCCccc-CCCCcEEEEEec--CCEEEEEECCCeEEEEcC--C-CceEEeccCCCCCeeEEEEEe
Q psy2107          92 SENVIDVEYLESTPTPSPLDCI-LHDDWVSAIDFH--NDWILTGCYDHSVHIWTR--R-GEHKLNIPGHGGPVKGVAWLY  165 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~--~-~~~~~~~~~~~~~v~~l~~~~  165 (391)
                      .++.+.+|.......  ...+. +|.  +.+++|+  +++|++++.|++|++||+  . ...+..+. +...+..++|  
T Consensus       157 ~d~~V~v~D~~t~~~--~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~--  229 (543)
T 1nir_A          157 DAGQIALVDGDSKKI--VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-IGIEARSVES--  229 (543)
T ss_dssp             GGTEEEEEETTTCCE--EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEE--
T ss_pred             CCCeEEEEECCCceE--EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-cCCCcceEEe--
Confidence            356677775432211  11112 333  8888897  679999999999999999  4 44444555 5566899999  


Q ss_pred             cCC----CCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEec----------C-CCCeEEEEEcCCCCE-EEEEeCCCcE
Q psy2107         166 NDG----KDAAFISVST-DQTAMIWEWKVESNSIECIHVCRG----------H-ERGLETVTVSESRQQ-FATGGWDCLL  228 (391)
Q Consensus       166 ~~~----~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~----------~-~~~v~~l~~~~~~~~-l~sg~~dg~i  228 (391)
                       ++    +++++++++. +++|.+||..    ..+++..+..          | ...+.++.++|++.. +++...++.|
T Consensus       230 -sp~~~~dg~~l~v~~~~~~~v~v~D~~----t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i  304 (543)
T 1nir_A          230 -SKFKGYEDRYTIAGAYWPPQFAIMDGE----TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV  304 (543)
T ss_dssp             -CCSTTCTTTEEEEEEEESSEEEEEETT----TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             -CCCcCCCCCEEEEEEccCCeEEEEecc----ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence             77    8888888874 8999999943    3455555543          2 237889999997654 5667788999


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccC
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELG  306 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~  306 (391)
                      .+||+.+.+.                           ..+..+ .+...+..+.|+|++. ++++ ..+++|.+||+.++
T Consensus       305 ~vvd~~~~~~---------------------------l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg  356 (543)
T 1nir_A          305 LLVNYKDIDN---------------------------LTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR  356 (543)
T ss_dssp             EEEECTTSSS---------------------------CEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred             EEEEecCCCc---------------------------ceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence            9999976332                           011233 3556688899997765 5555 45899999999999


Q ss_pred             ceeEEEECC----e-eeEEEEECCC-CCEEEEee-CCCcEEEEcCCCCCc----ceEEEEeccccCcEEEEEECCCCCCE
Q psy2107         307 GMKSEIVGN----K-SFFDVHYSPL-SKLVITAS-ADKQIRLYDPKVKEG----AIVKSTFSSHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       307 ~~~~~~~~~----~-~i~~~~~~p~-~~~l~~g~-~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~  375 (391)
                      +++..+...    . ....+ ++|+ +.+++++. .|++|.+||+.+...    ..++..+.+|...+..++++| +++.
T Consensus       357 ~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~p-dg~~  434 (543)
T 1nir_A          357 RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHP-KSSH  434 (543)
T ss_dssp             EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCT-TCCE
T ss_pred             eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCC-CCCc
Confidence            998888742    1 12222 4676 66677765 689999999987221    347889999998899999999 5667


Q ss_pred             EEEee-------CCCcEEEEecC
Q psy2107         376 FVSAS-------FDNSVKLWDLR  391 (391)
Q Consensus       376 l~s~~-------~dg~v~iwdlr  391 (391)
                      |++++       .+++|.|||+.
T Consensus       435 l~v~~~~~~~~~~~~~v~v~d~~  457 (543)
T 1nir_A          435 LYVDTTFNPDARISQSVAVFDLK  457 (543)
T ss_dssp             EEECCTTCSSHHHHTCEEEEETT
T ss_pred             EEEecCCCCCcccCceEEEEECC
Confidence            88776       27899999974

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.88  E-value=2.1e-20  Score=163.44  Aligned_cols=223  Identities=9%  Similarity=0.050  Sum_probs=157.9

Q ss_pred             CCEEEEEECCCeEEEEcCCC-ceEEeccCCC-CCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEec
Q psy2107         126 NDWILTGCYDHSVHIWTRRG-EHKLNIPGHG-GPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRG  202 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~-~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  202 (391)
                      +.++++++.++.|++||..+ +....+..+. ..+..++|   +++++++ +++..++.|.+||+.  +  .+.+..+..
T Consensus        11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~~~v~~~~~~~i~~~d~~--t--~~~~~~~~~   83 (349)
T 1jmx_B           11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMM---APDNRTAYVLNNHYGDIYGIDLD--T--CKNTFHANL   83 (349)
T ss_dssp             CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEE---CTTSSEEEEEETTTTEEEEEETT--T--TEEEEEEES
T ss_pred             CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEE---CCCCCEEEEEeCCCCcEEEEeCC--C--CcEEEEEEc
Confidence            55889999999999999954 4444444332 25788999   6777754 556678999999954  2  234444442


Q ss_pred             C------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         203 H------ERGLETVTVSESRQQFATGGWD------------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       203 ~------~~~v~~l~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      +      ...+.+++|+|+++++++++.+            +.|.+||+.+++..                         
T Consensus        84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-------------------------  138 (349)
T 1jmx_B           84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-------------------------  138 (349)
T ss_dssp             CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-------------------------
T ss_pred             ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcccc-------------------------
Confidence            2      2237889999999999998865            89999999764321                         


Q ss_pred             CCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe----------------------------
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK----------------------------  316 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------------------------  316 (391)
                       ..+..+. +...+.+++|++++.+++++  +.|.+||+.+++....+....                            
T Consensus       139 -~~~~~~~-~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (349)
T 1jmx_B          139 -KPVRTFP-MPRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLY  214 (349)
T ss_dssp             -CCSEEEE-CCSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEE
T ss_pred             -ceeeecc-CCCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeee
Confidence             1222333 23468889999877766654  449999999888776654331                            


Q ss_pred             -----------------------------------------eeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         317 -----------------------------------------SFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       317 -----------------------------------------~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                                                               .+..++|+| ++++++++  ++.|.+||+.+++   ...
T Consensus       215 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~---~~~  289 (349)
T 1jmx_B          215 TIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK---LIK  289 (349)
T ss_dssp             EEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE---EEE
T ss_pred             eeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe---EEE
Confidence                                                     234567789 99999888  8899999998755   444


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+. ....+.+++|+|++.. |++++.++.|++||++
T Consensus       290 ~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~  324 (349)
T 1jmx_B          290 AAN-LDHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPD  324 (349)
T ss_dssp             EEE-CSSCCCEEEECSSSSC-EEEESBSSEEEEEETT
T ss_pred             EEc-CCCCccceEECCCCCE-EEEecCCCeEEEEecc
Confidence            443 2345789999995554 5557788999999974

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.88  E-value=9.7e-20  Score=159.54  Aligned_cols=234  Identities=9%  Similarity=0.078  Sum_probs=169.7

Q ss_pred             CCcEEEEEec--CCEEEEEEC-------CCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEE
Q psy2107         116 DDWVSAIDFH--NDWILTGCY-------DHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMI  184 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~-------dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~i  184 (391)
                      ...+..++++  ++.+++++.       ++.|.+||.. ++....+. ....+..++|   +++++ ++++...++.|.+
T Consensus        40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~---s~dg~~l~v~~~~~~~v~~  115 (353)
T 3vgz_A           40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-NDLKPFGATI---NNTTQTLWFGNTVNSAVTA  115 (353)
T ss_dssp             ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-ESSCCCSEEE---ETTTTEEEEEETTTTEEEE
T ss_pred             ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-cCCCcceEEE---CCCCCEEEEEecCCCEEEE
Confidence            3456788887  567777764       5689999995 44444444 3455788999   55666 5555566899999


Q ss_pred             EeecCCCCceeEEEEEecCCC---------CeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107         185 WEWKVESNSIECIHVCRGHER---------GLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSK  253 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~---------~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  253 (391)
                      ||..    ..+.+..+..+..         .+.+++|+|+++++++++  .++.|.+||..+++                
T Consensus       116 ~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~----------------  175 (353)
T 3vgz_A          116 IDAK----TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIK----------------  175 (353)
T ss_dssp             EETT----TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTE----------------
T ss_pred             EeCC----CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCc----------------
Confidence            9954    2344455554332         278899999999887776  47889999997633                


Q ss_pred             ccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEEEEC-----CeeeEEEEECCCC
Q psy2107         254 KRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLS  327 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~  327 (391)
                                   ....+..+...+..++|++++ .+++++.++.|.+||+.+++....+..     ...+..++|+|++
T Consensus       176 -------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg  242 (353)
T 3vgz_A          176 -------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR  242 (353)
T ss_dssp             -------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT
T ss_pred             -------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC
Confidence                         344454455567889999654 588888999999999999998888765     2257789999999


Q ss_pred             CEEEEeeC-CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         328 KLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       328 ~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +++++++. ++.|.+||+.+++   ....+....  ...++|+|++..++++...++.|.+||++
T Consensus       243 ~~l~~~~~~~~~v~~~d~~~~~---~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~  302 (353)
T 3vgz_A          243 QRAFITDSKAAEVLVVDTRNGN---ILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAK  302 (353)
T ss_dssp             TEEEEEESSSSEEEEEETTTCC---EEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             CEEEEEeCCCCEEEEEECCCCc---EEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence            97776654 5999999998766   444444332  25799999665566777689999999973

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.88  E-value=4.5e-20  Score=161.43  Aligned_cols=243  Identities=7%  Similarity=0.079  Sum_probs=163.4

Q ss_pred             CCCcEEEEEec--CCEEEEEEC---CCeEEEEcCCCce---EEeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEEEE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCY---DHSVHIWTRRGEH---KLNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAMIW  185 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~---dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~iw  185 (391)
                      +...+..++|+  ++ |++++.   ++.|++|++.+..   +..+..+...+..++|   ++++++|++++ .++.|.+|
T Consensus        38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~---spdg~~l~~~~~~~~~v~v~  113 (347)
T 3hfq_A           38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAV---DEARQLVYSANYHKGTAEVM  113 (347)
T ss_dssp             ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEE---ETTTTEEEEEETTTTEEEEE
T ss_pred             ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEE---CCCCCEEEEEeCCCCEEEEE
Confidence            44556678887  44 555544   6899999995433   3344456778899999   66788787777 78999999


Q ss_pred             eecCCCCceeEEEEEecC---------CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CCCCCCCCCCCCCCcccccc
Q psy2107         186 EWKVESNSIECIHVCRGH---------ERGLETVTVSESRQQFATGGWDCLLKIWSADI-SKERGDPSENGDEGTTSKKR  255 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~---------~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~  255 (391)
                      ++.. ......+..+...         ...+.+++|+|+++++++...++.|.+|++.. ++.                 
T Consensus       114 ~~~~-~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~-----------------  175 (347)
T 3hfq_A          114 KIAA-DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL-----------------  175 (347)
T ss_dssp             EECT-TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE-----------------
T ss_pred             EeCC-CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE-----------------
Confidence            9753 2333444444321         23488999999999666666788999999973 211                 


Q ss_pred             ccccccCCCCCceeeecC-ccCcccEEEeccCCe-EEE-EECCCeEEEEeccc--Cce--eEEEECC-------eeeEEE
Q psy2107         256 KKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-IIT-SSWDHTLKIWDAEL--GGM--KSEIVGN-------KSFFDV  321 (391)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l~s-~~~dg~i~iwd~~~--~~~--~~~~~~~-------~~i~~~  321 (391)
                                .....+.. ....+..++|+|++. +++ +..++.|.+|++..  ++.  ...+...       ..+..+
T Consensus       176 ----------~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i  245 (347)
T 3hfq_A          176 ----------SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI  245 (347)
T ss_dssp             ----------EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred             ----------EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence                      11111121 223567899997775 555 45688999999874  443  2222221       357889


Q ss_pred             EECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107         322 HYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       322 ~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                      +|+|+|++| +++..++.|.+|++........+..+..+...+.+++|+|++ ++|++++ .++.|.+|++
T Consensus       246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~  315 (347)
T 3hfq_A          246 RLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYAR  315 (347)
T ss_dssp             EECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEE
T ss_pred             EECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEE
Confidence            999999977 455668999999986332223555666666778999999954 5555555 5589999954

>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}

Probab=99.87  E-value=1.2e-20  Score=181.79  Aligned_cols=242  Identities=8%  Similarity=0.014  Sum_probs=169.4

Q ss_pred             CCcEEEEEec--CCEEEEEEC-CC-----eEEEEcCCCc-eEEeccCCC------------------------CCeeEEE
Q psy2107         116 DDWVSAIDFH--NDWILTGCY-DH-----SVHIWTRRGE-HKLNIPGHG------------------------GPVKGVA  162 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~-dg-----~i~iwd~~~~-~~~~~~~~~------------------------~~v~~l~  162 (391)
                      ...|.+++|+  |++|++++. ||     .|++||+.+. ....+..+.                        ..+.+++
T Consensus        36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  115 (741)
T 2ecf_A           36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ  115 (741)
T ss_dssp             CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred             CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence            4568899998  679999998 88     9999999544 333333322                        2378999


Q ss_pred             EEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCC
Q psy2107         163 WLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP  242 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~  242 (391)
                      |   ++++++|++++. +.|++||+.....  .....+..|...+.+++|+|+|++|+.++. +.|++||+.+++.....
T Consensus       116 ~---SpDg~~l~~~~~-~~i~~~d~~~~~~--~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~  188 (741)
T 2ecf_A          116 W---SPDAQRLLFPLG-GELYLYDLKQEGK--AAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLT  188 (741)
T ss_dssp             E---CTTSSEEEEEET-TEEEEEESSSCST--TSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECC
T ss_pred             E---CCCCCEEEEEeC-CcEEEEECCCCCc--ceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEec
Confidence            9   889999999886 9999999653200  012345567788999999999999998874 68999999764431100


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecC--------ccCcccEEEeccCCe-EEEEECCC-----------------
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKG--------HKEAISAVQWTAVDE-IITSSWDH-----------------  296 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~-l~s~~~dg-----------------  296 (391)
                      ...                   ...  ...+        ....+..++|+|++. |++++.|+                 
T Consensus       189 ~~~-------------------~~~--~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~  247 (741)
T 2ecf_A          189 ADG-------------------STT--IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTD  247 (741)
T ss_dssp             CCC-------------------CSS--EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEE
T ss_pred             cCC-------------------ccc--eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCccc
Confidence            000                   000  0000        012257899997765 77777665                 


Q ss_pred             ----------------eEEEEeccc-CceeEEEE---CCeeeEEEEECCCCCEEEEeeC-----CCcEEEEcCCCCCcce
Q psy2107         297 ----------------TLKIWDAEL-GGMKSEIV---GNKSFFDVHYSPLSKLVITASA-----DKQIRLYDPKVKEGAI  351 (391)
Q Consensus       297 ----------------~i~iwd~~~-~~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~-----dg~i~iwd~~~~~~~~  351 (391)
                                      .|.+||+.+ ++......   ....+..++| |+|++|++++.     +..|++||+.+++   
T Consensus       248 ~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~---  323 (741)
T 2ecf_A          248 VIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ---  323 (741)
T ss_dssp             EEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---
T ss_pred             ceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---
Confidence                            889999988 77654432   3457899999 99999987653     5689999998766   


Q ss_pred             EEEEeccccC----cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFSSHKE----WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~~h~~----~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....+..+..    .+.+++|+|+ ++++++++.||.++||.+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~spd-g~~~~~~~~~g~~~l~~~  365 (741)
T 2ecf_A          324 QRVLAHETSPTWVPLHNSLRFLDD-GSILWSSERTGFQHLYRI  365 (741)
T ss_dssp             EEEEEEEECSSCCCCCSCCEECTT-SCEEEEECTTSSCEEEEE
T ss_pred             eEEEEEcCCCCcCCcCCceEECCC-CeEEEEecCCCccEEEEE
Confidence            3334444432    4568999995 458999999998888864

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.87  E-value=1.2e-19  Score=157.77  Aligned_cols=218  Identities=11%  Similarity=0.092  Sum_probs=145.5

Q ss_pred             CEEEEEECCCeEEEEcCCC-ceEEeccCCCC---CeeEEEEEecCCCCeE-EEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         127 DWILTGCYDHSVHIWTRRG-EHKLNIPGHGG---PVKGVAWLYNDGKDAA-FISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~---~v~~l~~~~~~~~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      +++++++.++.|++||... +.+..+. ...   .+..++|   +++++. ++++..++.|.+||+.  +  .+.+..+.
T Consensus         2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~---s~dg~~l~v~~~~~~~v~~~d~~--~--~~~~~~~~   73 (337)
T 1pby_B            2 DYILAPARPDKLVVIDTEKMAVDKVIT-IADAGPTPMVPMV---APGGRIAYATVNKSESLVKIDLV--T--GETLGRID   73 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEE-CTTCTTCCCCEEE---CTTSSEEEEEETTTTEEEEEETT--T--CCEEEEEE
T ss_pred             cEEEEcCCCCeEEEEECCCCcEEEEEE-cCCCCCCccceEE---cCCCCEEEEEeCCCCeEEEEECC--C--CCeEeeEE
Confidence            4789999999999999954 4444443 223   5788999   777765 4566678999999954  2  23344343


Q ss_pred             c-C----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         202 G-H----ERGLETVTVSESRQQFATGG------------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       202 ~-~----~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      . +    ...+.+++|+|+++++++++            .++.|.+||+.+++.                          
T Consensus        74 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~--------------------------  127 (337)
T 1pby_B           74 LSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR--------------------------  127 (337)
T ss_dssp             CCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE--------------------------
T ss_pred             cCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcE--------------------------
Confidence            2 1    22577899999999998886            579999999976443                          


Q ss_pred             CCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEEC-----------------------------
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG-----------------------------  314 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~-----------------------------  314 (391)
                         ...+.. ...+.+++|+|++. ++++  ++.|.+||+.+++....+..                             
T Consensus       128 ---~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~  201 (337)
T 1pby_B          128 ---RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATP  201 (337)
T ss_dssp             ---EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEE
T ss_pred             ---EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeee
Confidence               122221 22344555554433 3333  45555555554443322211                             


Q ss_pred             --------------------------------------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe
Q psy2107         315 --------------------------------------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF  356 (391)
Q Consensus       315 --------------------------------------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~  356 (391)
                                                            ...+.+++|+|++++++++  ++.|++||+.+++   ....+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~---~~~~~  276 (337)
T 1pby_B          202 FYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---SIKRV  276 (337)
T ss_dssp             EEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---EEEEE
T ss_pred             eeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc---Cccee
Confidence                                                  1235579999999999888  7999999987754   44444


Q ss_pred             ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         357 SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       357 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .. ...+.+++|+| ++.+|++++.++.|++||++
T Consensus       277 ~~-~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~  309 (337)
T 1pby_B          277 PL-PHSYYSVNVST-DGSTVWLGGALGDLAAYDAE  309 (337)
T ss_dssp             EC-SSCCCEEEECT-TSCEEEEESBSSEEEEEETT
T ss_pred             cC-CCceeeEEECC-CCCEEEEEcCCCcEEEEECc
Confidence            43 34578999999 45567777889999999974

>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}

Probab=99.86  E-value=1.1e-19  Score=157.86  Aligned_cols=227  Identities=11%  Similarity=0.044  Sum_probs=158.7

Q ss_pred             CEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         127 DWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      ..+++++.++.|.+||.. ++....+..+...+ .++|   +++++++++++. ++.|.+||+.  .... ....+..+.
T Consensus        11 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~---s~dg~~l~~~~~~~~~i~~~d~~--~~~~-~~~~~~~~~   83 (331)
T 3u4y_A           11 FGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAI---TSDCSNVVVTSDFCQTLVQIETQ--LEPP-KVVAIQEGQ   83 (331)
T ss_dssp             EEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEE---CSSSCEEEEEESTTCEEEEEECS--SSSC-EEEEEEECS
T ss_pred             EEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEE---cCCCCEEEEEeCCCCeEEEEECC--CCce-eEEecccCC
Confidence            367888899999999994 55555555555666 9999   778876665555 8999999965  2222 144555566


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107         205 RGLETVTVSESRQQFATGGWDC---LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV  281 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  281 (391)
                      .+..+++|+|++++++++..++   .|.+||+.+++                             .+..+.. .....++
T Consensus        84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~-----------------------------~~~~~~~-~~~~~~~  133 (331)
T 3u4y_A           84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK-----------------------------FISTIPI-PYDAVGI  133 (331)
T ss_dssp             SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE-----------------------------EEEEEEC-CTTEEEE
T ss_pred             CCccceEECCCCCEEEEecCCCCcccEEEEECCCCC-----------------------------eEEEEEC-CCCccce
Confidence            6666699999999999655553   89999997633                             3333433 3345899


Q ss_pred             EeccCCe-EEEE-ECCCe-EEEEecccCcee-----EEEECCeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcceE
Q psy2107         282 QWTAVDE-IITS-SWDHT-LKIWDAELGGMK-----SEIVGNKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       282 ~~~~~~~-l~s~-~~dg~-i~iwd~~~~~~~-----~~~~~~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~~~  352 (391)
                      +|+|++. ++++ ..++. |.+|++.....+     ..+........++|+|+|+++++ +..++.|++||+.+++....
T Consensus       134 ~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~  213 (331)
T 3u4y_A          134 AISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITL  213 (331)
T ss_dssp             EECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE
T ss_pred             EECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccce
Confidence            9997764 5554 55588 999998754432     22233446789999999996654 45689999999987663122


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..+.. ...+..++|+|++..++++...++.|.+||+.
T Consensus       214 ~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~  251 (331)
T 3u4y_A          214 LNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL  251 (331)
T ss_dssp             EEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred             eeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence            445543 36678999999555455666678899999973

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.86  E-value=1.3e-20  Score=176.40  Aligned_cols=228  Identities=13%  Similarity=0.106  Sum_probs=166.0

Q ss_pred             CcEEEEEec--CCEEEEEEC-CCeEEEEcCCCceEEeccCCC-CCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecC
Q psy2107         117 DWVSAIDFH--NDWILTGCY-DHSVHIWTRRGEHKLNIPGHG-GPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKV  189 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~  189 (391)
                      .+|.+++|+  |+.||.++. ||+++||++++.....+..|. ..+..++|   +|+ .++++++.   +....+|.++.
T Consensus        22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~---spd-~~l~~~~~~~g~~~~~l~~~~~   97 (582)
T 3o4h_A           22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHY---GVG-RVILVRDVSKGAEQHALFKVNT   97 (582)
T ss_dssp             SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECT---TCS-EEEEEEECSTTSCCEEEEEEET
T ss_pred             cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccC---CCC-eEEEEeccCCCCcceEEEEEec
Confidence            368888887  789998877 999999999777777777666 68999999   667 77777765   56678887665


Q ss_pred             --CCCceeEEEEEecCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         190 --ESNSIECIHVCRGHERGLETVTVSESRQQ-FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       190 --~~~~~~~~~~~~~~~~~v~~l~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                        .... .   .+.. ...+...+|+|+++. +++.+.++.+.+||+.+++.                            
T Consensus        98 ~~~g~~-~---~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~----------------------------  144 (582)
T 3o4h_A           98 SRPGEE-Q---RLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGL----------------------------  144 (582)
T ss_dssp             TSTTCC-E---ECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE----------------------------
T ss_pred             cCCCcc-c---cccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcE----------------------------
Confidence              3222 1   2222 223446688887753 33334445566999976332                            


Q ss_pred             ceeeecCccCcccEEEeccCCe-EEEEECC----CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC--cE
Q psy2107         267 PLITLKGHKEAISAVQWTAVDE-IITSSWD----HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK--QI  339 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg--~i  339 (391)
                       . .+..+..  .+++|+|++. +++++.+    +.|++||+.+++......+...+..++|+|||++|+++..++  .|
T Consensus       145 -~-~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i  220 (582)
T 3o4h_A          145 -R-ELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARL  220 (582)
T ss_dssp             -E-EEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred             -E-EeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence             1 2222222  7899997665 6667766    789999999888764433445789999999999999888888  89


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEE--------ECCCCCCEEEEeeCCCcEEEEec
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVR--------WSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~--------~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++||+.+++   .. .+.+|...+..++        |+|++ .++++++.||.+++|++
T Consensus       221 ~~~d~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~  274 (582)
T 3o4h_A          221 VTVDPRDGS---VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID  274 (582)
T ss_dssp             EEECTTTCC---EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET
T ss_pred             EEEcCCCCc---EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE
Confidence            999998765   44 6677877777777        99966 89999999999999985

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.86  E-value=3e-20  Score=178.07  Aligned_cols=239  Identities=10%  Similarity=0.056  Sum_probs=167.3

Q ss_pred             CcEEEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC-CCce
Q psy2107         117 DWVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE-SNSI  194 (391)
Q Consensus       117 ~~V~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~~~~  194 (391)
                      ..|.+++|+++ .++.+ .++.|++||+.+.....+..+...+.+++|   +|+++.|+++ .|+.|++|++... ....
T Consensus        82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~---SpdG~~la~~-~~~~i~v~~~~~~~~~~g  156 (706)
T 2z3z_A           82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDF---SPVGDRVAYV-RNHNLYIARGGKLGEGMS  156 (706)
T ss_dssp             CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEE---CTTSSEEEEE-ETTEEEEEECBCTTSCCC
T ss_pred             cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcC---CCCCCEEEEE-ECCeEEEEecCcccccCC
Confidence            56999999954 44444 569999999977777777777888999999   7889988885 6899999996530 0001


Q ss_pred             eEEEEEecCCCC--------------eEEEEEcCCCCEEEEEe---------------------------------CCCc
Q psy2107         195 ECIHVCRGHERG--------------LETVTVSESRQQFATGG---------------------------------WDCL  227 (391)
Q Consensus       195 ~~~~~~~~~~~~--------------v~~l~~~~~~~~l~sg~---------------------------------~dg~  227 (391)
                      ........+...              +.+++|+|+|++|++++                                 .+..
T Consensus       157 ~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~  236 (706)
T 2z3z_A          157 RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT  236 (706)
T ss_dssp             CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred             CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence            222222222222              48999999999999987                                 3467


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCC-----eEEEE
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDH-----TLKIW  301 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg-----~i~iw  301 (391)
                      |.+||+.+++..                           .+.....|...+.+++|+|++. +++++.++     .|++|
T Consensus       237 l~~~d~~~~~~~---------------------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~  289 (706)
T 2z3z_A          237 VGIYHLATGKTV---------------------------YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAY  289 (706)
T ss_dssp             EEEEETTTTEEE---------------------------ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEECCCCceE---------------------------eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEE
Confidence            888888663321                           1111124667789999997765 77777665     89999


Q ss_pred             ecccCceeEEEE---CCe---eeEEEEECC--CCCEEEEeeCCCcEEEEcCC-CCCcceEEEEeccccCcEEE-EEECCC
Q psy2107         302 DAELGGMKSEIV---GNK---SFFDVHYSP--LSKLVITASADKQIRLYDPK-VKEGAIVKSTFSSHKEWVQS-VRWSPI  371 (391)
Q Consensus       302 d~~~~~~~~~~~---~~~---~i~~~~~~p--~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~~-~~~~~~  371 (391)
                      |+.+++....+.   ...   .+..++|+|  +|+++++++.++.++||.+. .+.   ....+..|...+.. ++|+|+
T Consensus       290 d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~---~~~~l~~~~~~v~~~~~~spd  366 (706)
T 2z3z_A          290 DAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR---LIRQVTKGEWEVTNFAGFDPK  366 (706)
T ss_dssp             ETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC---EEEECCCSSSCEEEEEEECTT
T ss_pred             ECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC---EEEecCCCCeEEEeeeEEcCC
Confidence            999984333332   111   235789999  99999999999999999875 222   45567778778877 799996


Q ss_pred             CCCEEEEeeCCC----cEEEEec
Q psy2107         372 DPQLFVSASFDN----SVKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg----~v~iwdl  390 (391)
                      +..++++++.++    .|..||+
T Consensus       367 g~~l~~~~~~~~~~~~~l~~~d~  389 (706)
T 2z3z_A          367 GTRLYFESTEASPLERHFYCIDI  389 (706)
T ss_dssp             SSEEEEEESSSCTTCBEEEEEET
T ss_pred             CCEEEEEecCCCCceEEEEEEEc
Confidence            655556666665    5555654

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.85  E-value=3.6e-20  Score=178.07  Aligned_cols=301  Identities=10%  Similarity=0.065  Sum_probs=177.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCC---cEEEEEec--CCEEEEEECC-----
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDD---WVSAIDFH--NDWILTGCYD-----  135 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~---~V~~~~~~--~~~l~t~~~d-----  135 (391)
                      ....|+++|+++.+           +.++.+.+|........  ....+|..   .|.+++|+  |++|++++.+     
T Consensus        20 ~~~~~spdg~~~~~-----------~~dg~i~~~d~~~g~~~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~   86 (723)
T 1xfd_A           20 PEAKWISDTEFIYR-----------EQKGTVRLWNVETNTST--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ   86 (723)
T ss_dssp             CCCCBSSSSCBCCC-----------CSSSCEEEBCGGGCCCE--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred             cccEEcCCCcEEEE-----------eCCCCEEEEECCCCcEE--EEeccccccccccceEEECCCCCEEEEEecCcccee
Confidence            45688999987653           24556777765433221  12223433   48899998  6689988774     


Q ss_pred             ----CeEEEEcCCCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC--
Q psy2107         136 ----HSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG--  206 (391)
Q Consensus       136 ----g~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--  206 (391)
                          +.+++||+.+.....+.   .|...+..++|   +|+++.|+.++. +.|++||+.  +..  .......+...  
T Consensus        87 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~---SPdG~~la~~~~-~~i~~~~~~--~g~--~~~~~~~~~~~~~  158 (723)
T 1xfd_A           87 HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGW---GPKGQQLIFIFE-NNIYYCAHV--GKQ--AIRVVSTGKEGVI  158 (723)
T ss_dssp             SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCB---CSSTTCEEEEET-TEEEEESSS--SSC--CEEEECCCBTTTE
T ss_pred             ecceeeEEEEECCCCceEeccCCccccccccccEE---CCCCCEEEEEEC-CeEEEEECC--CCc--eEEEecCCCCCce
Confidence                78899999655444443   44555889999   778999998886 799999954  222  22333333332  


Q ss_pred             ----------------eEEEEEcCCCCEEEEEeCC-CcEEEEECCCCCCCCCC-------CCCCCCCccccccccccccC
Q psy2107         207 ----------------LETVTVSESRQQFATGGWD-CLLKIWSADISKERGDP-------SENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       207 ----------------v~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  262 (391)
                                      +.+++|+|+|+.|++++.| +.+.+|++.........       ...+.   .........++.
T Consensus       159 ~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~~~~~~l~~~d~  235 (723)
T 1xfd_A          159 YNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGS---ENPSISLHVIGL  235 (723)
T ss_dssp             EEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTS---CCCEEEEEEEES
T ss_pred             ECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCC---CCCeeEEEEEEC
Confidence                            3789999999999988755 34555554321110000       00000   000001111122


Q ss_pred             CCCCceeeecC------ccCcccEEEeccCCeEE-EEEC----CCeEEEEecccCceeEEEECC--eee----EEEEECC
Q psy2107         263 SSRTPLITLKG------HKEAISAVQWTAVDEII-TSSW----DHTLKIWDAELGGMKSEIVGN--KSF----FDVHYSP  325 (391)
Q Consensus       263 ~~~~~~~~~~~------~~~~v~~~~~~~~~~l~-s~~~----dg~i~iwd~~~~~~~~~~~~~--~~i----~~~~~~p  325 (391)
                      ........+..      +...+..++|+|++.++ +.+.    +..|++||+.+++....+..+  ..+    ..++|+|
T Consensus       236 ~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp  315 (723)
T 1xfd_A          236 NGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSK  315 (723)
T ss_dssp             SSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECT
T ss_pred             CCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcC
Confidence            22222233333      35678899999888744 4432    368999999998876655432  222    3789999


Q ss_pred             CCCEEEE--eeCCC------cEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeCC--CcEEEEec
Q psy2107         326 LSKLVIT--ASADK------QIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASFD--NSVKLWDL  390 (391)
Q Consensus       326 ~~~~l~~--g~~dg------~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~d--g~v~iwdl  390 (391)
                      +|+.|+.  +..++      .|++||+...........+..+...+.. ++|+|++..+++++..+  +.++||++
T Consensus       316 dg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~  391 (723)
T 1xfd_A          316 DGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA  391 (723)
T ss_dssp             TSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred             CCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence            9997765  44566      5777773222210002233333344554 69999554433444444  88999986

>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*

Probab=99.85  E-value=2.6e-19  Score=171.54  Aligned_cols=273  Identities=11%  Similarity=0.097  Sum_probs=179.1

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ..+.|++++.++.+            .++.+.+|....   .....+..+...+.+++|+  |+.|+++ .|+.|++|++
T Consensus        85 ~~~~~spd~~~~~~------------~~~~i~~~d~~~---~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~  148 (706)
T 2z3z_A           85 FRTLDAGRGLVVLF------------TQGGLVGFDMLA---RKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARG  148 (706)
T ss_dssp             EEEEETTTTEEEEE------------ETTEEEEEETTT---TEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEEC
T ss_pred             eeEEECCCCeEEEE------------ECCEEEEEECCC---CceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEec
Confidence            45688888655554            235667766432   1223344566678888888  6688874 6899999999


Q ss_pred             CC-----ceEEe-ccCCCCC--------------eeEEEEEecCCCCeEEEEEe--------------------------
Q psy2107         144 RG-----EHKLN-IPGHGGP--------------VKGVAWLYNDGKDAAFISVS--------------------------  177 (391)
Q Consensus       144 ~~-----~~~~~-~~~~~~~--------------v~~l~~~~~~~~~~~l~s~~--------------------------  177 (391)
                      .+     ..... ...+...              +.++.|   +|++++|++++                          
T Consensus       149 ~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~---SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y  225 (706)
T 2z3z_A          149 GKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFW---SPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYY  225 (706)
T ss_dssp             BCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEE---CTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECC
T ss_pred             CcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEE---CCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeC
Confidence            54     44333 3333332              589999   88899999887                          


Q ss_pred             -------CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCC
Q psy2107         178 -------TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSEN  245 (391)
Q Consensus       178 -------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~  245 (391)
                             .+..|.+||+.  +.....+.....|...+.+++|+|+++.|++++.++     .|++||+.+++..      
T Consensus       226 ~~~g~~~~~~~l~~~d~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~------  297 (706)
T 2z3z_A          226 PMAGTPSHHVTVGIYHLA--TGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV------  297 (706)
T ss_dssp             CBTTSCCCEEEEEEEETT--TTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE------
T ss_pred             CCCCCCCCeeEEEEEECC--CCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee------
Confidence                   44678889854  332222221124667899999999999999988776     8999999774210      


Q ss_pred             CCCCccccccccccccCCCCCceeeecCcc---CcccEEEecc--CCe-EEEEECCCeEEEEecc-cCceeEEEECCe-e
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTA--VDE-IITSSWDHTLKIWDAE-LGGMKSEIVGNK-S  317 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~--~~~-l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~  317 (391)
                                          ..+.. ..+.   ..+..+.|+|  ++. +++++.|+.+++|++. ++..+..+..+. .
T Consensus       298 --------------------~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~  356 (706)
T 2z3z_A          298 --------------------RTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWE  356 (706)
T ss_dssp             --------------------EEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSC
T ss_pred             --------------------eEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeE
Confidence                                01111 1112   2346789998  776 6667788999999886 566666665444 5


Q ss_pred             eEE-EEECCCCCEEEEeeC-CC----cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC---CcEEEE
Q psy2107         318 FFD-VHYSPLSKLVITASA-DK----QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---NSVKLW  388 (391)
Q Consensus       318 i~~-~~~~p~~~~l~~g~~-dg----~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iw  388 (391)
                      +.. ++|+|+++.|+.++. ++    .|+.||+.++.    ...+. |...+.+++|+|++..++++++.+   +.|++|
T Consensus       357 v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~----~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~  431 (706)
T 2z3z_A          357 VTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK----TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVT  431 (706)
T ss_dssp             EEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC----CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEE
T ss_pred             EEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC----ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEE
Confidence            665 799999997765544 44    56677766543    22332 667799999999555444444443   569999


Q ss_pred             ecC
Q psy2107         389 DLR  391 (391)
Q Consensus       389 dlr  391 (391)
                      |+.
T Consensus       432 d~~  434 (706)
T 2z3z_A          432 NIG  434 (706)
T ss_dssp             ESS
T ss_pred             ECC
Confidence            863

>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24

Probab=99.84  E-value=4.5e-20  Score=177.35  Aligned_cols=232  Identities=10%  Similarity=0.051  Sum_probs=161.3

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCC---CeeEEEEEecCCCCeEEEEEeCC---------CcEE
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGG---PVKGVAWLYNDGKDAAFISVSTD---------QTAM  183 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~---~v~~l~~~~~~~~~~~l~s~~~d---------g~v~  183 (391)
                      +.+++|+  |+++++ +.||+|++||+. ++....+..|..   .|.+++|   +|++++|++++.+         +.+.
T Consensus        19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~---SpDg~~l~~~~~~~~~~~~~~~~~i~   94 (723)
T 1xfd_A           19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI---SPDREYALFSYNVEPIYQHSYTGYYV   94 (723)
T ss_dssp             CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE---CTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred             ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEE---CCCCCEEEEEecCccceeecceeeEE
Confidence            4567887  556655 789999999994 444555555554   4999999   8899999999875         7788


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +||+.  +.....+....+|...+..++|+|+|+.|+.++. +.|++||+.+++.                         
T Consensus        95 ~~d~~--~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~-------------------------  146 (723)
T 1xfd_A           95 LSKIP--HGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQA-------------------------  146 (723)
T ss_dssp             EEESS--SCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCC-------------------------
T ss_pred             EEECC--CCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCce-------------------------
Confidence            99965  3332223222344555889999999999999886 7999999976442                         


Q ss_pred             CCCceeeecCccC------------------cccEEEeccCCe-EEEEECCC----------------------------
Q psy2107         264 SRTPLITLKGHKE------------------AISAVQWTAVDE-IITSSWDH----------------------------  296 (391)
Q Consensus       264 ~~~~~~~~~~~~~------------------~v~~~~~~~~~~-l~s~~~dg----------------------------  296 (391)
                          ......+..                  .+.+++|+|++. |++++.|+                            
T Consensus       147 ----~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  222 (723)
T 1xfd_A          147 ----IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG  222 (723)
T ss_dssp             ----EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred             ----EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence                111122121                  237899997765 77766543                            


Q ss_pred             ------eEEEEecccCceeEEEEC-------CeeeEEEEECCCCCEEEEeeC----CCcEEEEcCCCCCcceEEEEec-c
Q psy2107         297 ------TLKIWDAELGGMKSEIVG-------NKSFFDVHYSPLSKLVITASA----DKQIRLYDPKVKEGAIVKSTFS-S  358 (391)
Q Consensus       297 ------~i~iwd~~~~~~~~~~~~-------~~~i~~~~~~p~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~~~-~  358 (391)
                            .|++||+.+++....+..       ...+..++|+|||+++++.+.    +..|++||+.+++   +...+. .
T Consensus       223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~---~~~~~~~~  299 (723)
T 1xfd_A          223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV---CTKKHEDE  299 (723)
T ss_dssp             SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC---EEEEEEEE
T ss_pred             CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc---ceEEEEec
Confidence                  799999998886555554       347889999999998877643    3579999998765   333332 2


Q ss_pred             ccCcEE----EEEECCCCCCEEEE-eeCCC------cEEEEe
Q psy2107         359 HKEWVQ----SVRWSPIDPQLFVS-ASFDN------SVKLWD  389 (391)
Q Consensus       359 h~~~v~----~~~~~~~~~~~l~s-~~~dg------~v~iwd  389 (391)
                      +...+.    .++|+|++..+++. +..++      .|.+||
T Consensus       300 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d  341 (723)
T 1xfd_A          300 SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS  341 (723)
T ss_dssp             CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred             cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence            344443    78999966665554 56777      566676

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.84  E-value=1.3e-19  Score=180.66  Aligned_cols=235  Identities=9%  Similarity=-0.006  Sum_probs=177.7

Q ss_pred             cccCCCCcEEEEEecCC-EEEEEECCCeEEEEcC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFHND-WILTGCYDHSVHIWTR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~-~l~t~~~dg~i~iwd~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      .+.+|...+.++.|+++ ++++++.||.+.||.+  .+.....+..|. .+...+|+   +++..++.+ .++.|.+|++
T Consensus       198 ~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~S---pDG~~la~~-~~~~i~~~d~  272 (1045)
T 1k32_A          198 KIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLN---TDGRRILFS-KGGSIYIFNP  272 (1045)
T ss_dssp             EEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEE---ESSSCEEEE-ETTEEEEECT
T ss_pred             ECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEc---CCCCEEEEE-eCCEEEEecC
Confidence            34679999999999977 4556777898999975  455566666665 46677894   467778777 4899999995


Q ss_pred             cCCCCceeEEEEEec-----------CCCCeEEEEEc-CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107         188 KVESNSIECIHVCRG-----------HERGLETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKR  255 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  255 (391)
                      .  ..   .+..+.+           |...+.+++|+ |+|+.|++++ ++.|.+|++..+.                  
T Consensus       273 ~--~~---~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~------------------  328 (1045)
T 1k32_A          273 D--TE---KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTY------------------  328 (1045)
T ss_dssp             T--TC---CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSB------------------
T ss_pred             C--ce---EeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCc------------------
Confidence            2  22   1223333           34478999999 9999999888 7899999986522                  


Q ss_pred             ccccccCCCCCceeeecCccC-cccEEEeccCCe-EEEEECCCeEE-EEecccCceeEEEECCeeeEEEEECCCCCEEEE
Q psy2107         256 KKEYSSASSRTPLITLKGHKE-AISAVQWTAVDE-IITSSWDHTLK-IWDAELGGMKSEIVGNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       256 ~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~-l~s~~~dg~i~-iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~  332 (391)
                                  ...+..|.. .+..++|+ ++. ++.++.++.+. +||+..++......+...+..++|+|+|++|++
T Consensus       329 ------------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~  395 (1045)
T 1k32_A          329 ------------VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVV  395 (1045)
T ss_dssp             ------------EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEE
T ss_pred             ------------eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEE
Confidence                        223455666 78899999 654 78888888888 999987765443322347899999999999999


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC----------cEEEEecC
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN----------SVKLWDLR  391 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg----------~v~iwdlr  391 (391)
                      ++.++.|++||+.+++   ......+|...+.+++|+| ++++|++++.++          .|++||+.
T Consensus       396 ~~~~~~v~~~d~~tg~---~~~~~~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~  460 (1045)
T 1k32_A          396 ANDRFEIMTVDLETGK---PTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDME  460 (1045)
T ss_dssp             EETTSEEEEEETTTCC---EEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred             ECCCCeEEEEECCCCc---eEEeccCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECC
Confidence            9999999999998766   5555667889999999999 556677776544          89999973

>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*

Probab=99.83  E-value=6.4e-18  Score=147.90  Aligned_cols=223  Identities=13%  Similarity=0.117  Sum_probs=159.8

Q ss_pred             cEEEEEec--CC-EEEEEECCCeEEEEcCC-CceEEeccCCCC---------CeeEEEEEecCCCCeEEEEEe--CCCcE
Q psy2107         118 WVSAIDFH--ND-WILTGCYDHSVHIWTRR-GEHKLNIPGHGG---------PVKGVAWLYNDGKDAAFISVS--TDQTA  182 (391)
Q Consensus       118 ~V~~~~~~--~~-~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~---------~v~~l~~~~~~~~~~~l~s~~--~dg~v  182 (391)
                      .+.+++++  ++ +++++..++.|.+||.. ++....+..+..         .+.+++|   +++++.+++++  .++.|
T Consensus        90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~i  166 (353)
T 3vgz_A           90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVA---DDATNTVYISGIGKESVI  166 (353)
T ss_dssp             CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEE---ETTTTEEEEEEESSSCEE
T ss_pred             CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEE---CCCCCEEEEEecCCCceE
Confidence            35566776  56 44555667999999994 555555554332         2688999   55677666555  47889


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      .+||..    ..+.+..+..+...+.+++|+|+++++++++.++.|.+||..+++.                        
T Consensus       167 ~~~d~~----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~------------------------  218 (353)
T 3vgz_A          167 WVVDGG----NIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKI------------------------  218 (353)
T ss_dssp             EEEETT----TTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEE------------------------
T ss_pred             EEEcCC----CCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeE------------------------
Confidence            999954    3455566654566688999999999999999999999999976442                        


Q ss_pred             CCCCceeeec----CccCcccEEEeccCC-eEEEEEC-CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee-C
Q psy2107         263 SSRTPLITLK----GHKEAISAVQWTAVD-EIITSSW-DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS-A  335 (391)
Q Consensus       263 ~~~~~~~~~~----~~~~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~  335 (391)
                           ...+.    ++...+..++|++++ .+++++. ++.|.+||+.+++.+..+....+ ..++|+|+++++++++ .
T Consensus       219 -----~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~~~  292 (353)
T 3vgz_A          219 -----LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTHRQ  292 (353)
T ss_dssp             -----EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEETT
T ss_pred             -----EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEECC
Confidence                 22222    245567789999655 4655554 59999999999999888876654 5699999999665554 6


Q ss_pred             CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      ++.|.+||+.+++   ....+.. ...+.+++|+|++..++++...
T Consensus       293 ~~~v~~~d~~~~~---~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~  334 (353)
T 3vgz_A          293 AGKVSVIDAKSYK---VVKTFDT-PTHPNSLALSADGKTLYVSVKQ  334 (353)
T ss_dssp             TTEEEEEETTTTE---EEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCeEEEEECCCCe---EEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence            8999999987765   4545543 3468999999955545555544

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.83  E-value=2.3e-17  Score=144.99  Aligned_cols=252  Identities=8%  Similarity=0.055  Sum_probs=156.4

Q ss_pred             CCCcEEEEEec--CCEEEEEECC----CeEEEEcCCC--ceE---EeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcE
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYD----HSVHIWTRRG--EHK---LNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTA  182 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~d----g~i~iwd~~~--~~~---~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v  182 (391)
                      |...+..++|+  +++|++++.+    +.|.+|+++.  ..+   .....+......+++     +++++++++ .++.|
T Consensus        48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-----dg~~l~~~~~~~~~v  122 (361)
T 3scy_A           48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-----NGKNIVTANYSGGSI  122 (361)
T ss_dssp             ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-----CSSEEEEEETTTTEE
T ss_pred             cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-----CCCEEEEEECCCCEE
Confidence            55566678887  6688888876    8999998732  222   233345556667776     455555555 68899


Q ss_pred             EEEeecCCCCceeE--EEEEec--------CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         183 MIWEWKVESNSIEC--IHVCRG--------HERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       183 ~iwd~~~~~~~~~~--~~~~~~--------~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      .+|++.........  .....+        +...+.+++|+|+++++++++ .++.|.+|+++........    ...  
T Consensus       123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~----~~l--  196 (361)
T 3scy_A          123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNK----EKF--  196 (361)
T ss_dssp             EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTC----CCC--
T ss_pred             EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccc----cce--
Confidence            99997532211111  111111        123458899999999776655 5789999998652210000    000  


Q ss_pred             ccccccccccCCCC-CceeeecCccCcccEEEeccCCe-EEEEE-CCCeEEEEecccCce--eEEEECC----eeeEEEE
Q psy2107         252 SKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGGM--KSEIVGN----KSFFDVH  322 (391)
Q Consensus       252 ~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~--~~~~~~~----~~i~~~~  322 (391)
                                 ... ........+......++|+|++. +++++ .++.|.+||+.++..  +..+...    .....++
T Consensus       197 -----------~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~  265 (361)
T 3scy_A          197 -----------LTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH  265 (361)
T ss_dssp             -----------EEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred             -----------eecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence                       000 00111122344567899998775 66666 689999999987754  2333221    2467899


Q ss_pred             ECCCCCEEEEeeC--CCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107         323 YSPLSKLVITASA--DKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       323 ~~p~~~~l~~g~~--dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                      |+|+|++|+++..  ++.|.+|++....+ ...+..+.. ...+.+++|+|++ ++|++++ .++.|.+|++
T Consensus       266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~~  335 (361)
T 3scy_A          266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFER  335 (361)
T ss_dssp             ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEEE
T ss_pred             ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEEE
Confidence            9999998876665  48999999863222 223333433 4568899999954 5555555 7799999754

>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*

Probab=99.82  E-value=2.3e-18  Score=171.70  Aligned_cols=249  Identities=12%  Similarity=-0.000  Sum_probs=184.6

Q ss_pred             ceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccC-----------CCCCeeE
Q psy2107          94 NVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG-----------HGGPVKG  160 (391)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~-----------~~~~v~~  160 (391)
                      +...+|...... .....+..|. .+.+.+|+  |+.++.+ .++.|++|++....+..+..           |...+.+
T Consensus       224 g~~~l~~~~~~g-~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~  300 (1045)
T 1k32_A          224 GFGQIYSTDLDG-KDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFA  300 (1045)
T ss_dssp             SSCEEEEEETTS-CSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGE
T ss_pred             CceEEEEEeCCC-CcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccce
Confidence            455666654211 1222333344 34445565  7777777 48999999996665555554           3447899


Q ss_pred             EEEEecC-CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCC-CeEEEEEcCCCCEEEEEeCCCcEE-EEECCCCC
Q psy2107         161 VAWLYND-GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER-GLETVTVSESRQQFATGGWDCLLK-IWSADISK  237 (391)
Q Consensus       161 l~~~~~~-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~sg~~dg~i~-iwd~~~~~  237 (391)
                      ++|   + |++..+++++ ++.+.+|+..  ...   ...+..|.. .+..++|+ +++.|+.++.++.+. +||+.+++
T Consensus       301 ~~~---S~pdG~~la~~~-~~~i~~~~~~--~~~---~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~  370 (1045)
T 1k32_A          301 EDF---SPLDGDLIAFVS-RGQAFIQDVS--GTY---VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK  370 (1045)
T ss_dssp             EEE---EECGGGCEEEEE-TTEEEEECTT--SSB---EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC
T ss_pred             eee---cCCCCCEEEEEE-cCEEEEEcCC--CCc---eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC
Confidence            999   5 6788888887 8899999854  222   233556777 89999999 999999999888888 88986522


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECC-
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN-  315 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~-  315 (391)
                                                    ...+.+|...+..++|+|++. |++++.++.|++||+.+++.......+ 
T Consensus       371 ------------------------------~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~  420 (1045)
T 1k32_A          371 ------------------------------AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE  420 (1045)
T ss_dssp             ------------------------------EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred             ------------------------------ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC
Confidence                                          223336778899999997664 888899999999999999887777544 


Q ss_pred             eeeEEEEECCCCCEEEEeeCCC----------cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         316 KSFFDVHYSPLSKLVITASADK----------QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       316 ~~i~~~~~~p~~~~l~~g~~dg----------~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      ..+.+++|+|+|++|++++.++          .|++||+.+++    ...+..|...+.+++|+| +++.|++++.++..
T Consensus       421 ~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~  495 (1045)
T 1k32_A          421 AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLD  495 (1045)
T ss_dssp             SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE----EEECSCSSSBEEEEEECT-TSCEEEEEESCCCC
T ss_pred             CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc----EEEeeCCCcccCCceEcC-CCCEEEEEecccCC
Confidence            4778999999999998887654          89999987643    456777888899999999 56678888888888


Q ss_pred             EEEec
Q psy2107         386 KLWDL  390 (391)
Q Consensus       386 ~iwdl  390 (391)
                      .+|+.
T Consensus       496 ~~~~~  500 (1045)
T 1k32_A          496 PSPDR  500 (1045)
T ss_dssp             CEECS
T ss_pred             cCcch
Confidence            88864

>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}

Probab=99.81  E-value=3e-17  Score=143.42  Aligned_cols=224  Identities=13%  Similarity=0.109  Sum_probs=149.6

Q ss_pred             CCeEEEEcC--CCceEE--eccCCCCCeeEEEEEecCCCCeEEEEEeC---CCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107         135 DHSVHIWTR--RGEHKL--NIPGHGGPVKGVAWLYNDGKDAAFISVST---DQTAMIWEWKVESNSIECIHVCRGHERGL  207 (391)
Q Consensus       135 dg~i~iwd~--~~~~~~--~~~~~~~~v~~l~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v  207 (391)
                      ++.|.+|++  .+..+.  ....+......++|   +++++ +++++.   ++.|.+|++.  ....+.+..+..+...+
T Consensus        15 ~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~---spdg~-l~~~~~~~~~~~v~~~~~~--~g~~~~~~~~~~~~~~p   88 (347)
T 3hfq_A           15 SQGIYQGTLDTTAKTLTNDGLLAATQNPTYLAL---SAKDC-LYSVDKEDDEGGIAAWQID--GQTAHKLNTVVAPGTPP   88 (347)
T ss_dssp             CCEEEEEEEETTTTEEEEEEEEEECSCCCCEEE---CTTCE-EEEEEEETTEEEEEEEEEE--TTEEEEEEEEEEESCCC
T ss_pred             CCCEEEEEEcCCCCeEEEeeeeeccCCcceEEE---ccCCe-EEEEEecCCCceEEEEEec--CCcEEEeeeeecCCCCC
Confidence            456788766  333332  23345567788999   77888 554443   6899999974  34445566656677889


Q ss_pred             EEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec---------CccCc
Q psy2107         208 ETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK---------GHKEA  277 (391)
Q Consensus       208 ~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~  277 (391)
                      ..++|+|++++|++++ .++.|.+|++.....                          ...+..+.         .+...
T Consensus        89 ~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~--------------------------~~~~~~~~~~~~~p~~~~~~~~  142 (347)
T 3hfq_A           89 AYVAVDEARQLVYSANYHKGTAEVMKIAADGA--------------------------LTLTDTVQHSGHGPRPEQDGSH  142 (347)
T ss_dssp             SEEEEETTTTEEEEEETTTTEEEEEEECTTSC--------------------------EEEEEEEECCCCCSSTTCSSCC
T ss_pred             EEEEECCCCCEEEEEeCCCCEEEEEEeCCCCC--------------------------eeecceeecCCCCCCccccCCC
Confidence            9999999999888887 679999999953111                          01111111         12335


Q ss_pred             ccEEEeccCCeEEEE-ECCCeEEEEecc-cCceeEE--EEC--CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcc
Q psy2107         278 ISAVQWTAVDEIITS-SWDHTLKIWDAE-LGGMKSE--IVG--NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGA  350 (391)
Q Consensus       278 v~~~~~~~~~~l~s~-~~dg~i~iwd~~-~~~~~~~--~~~--~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~  350 (391)
                      +.+++|+|++.++++ ..++.|++||+. +++....  +..  ...+..++|+|+|+++++ +..++.|.+|++....+.
T Consensus       143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~  222 (347)
T 3hfq_A          143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA  222 (347)
T ss_dssp             EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred             ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence            778999977665554 457899999998 5543322  222  236778999999996655 566889999998752222


Q ss_pred             -eEEEEecccc------CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         351 -IVKSTFSSHK------EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       351 -~~~~~~~~h~------~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .....+....      ..+..++|+|++..++++...++.|.+||+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~  269 (347)
T 3hfq_A          223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV  269 (347)
T ss_dssp             EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred             eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence             1222332222      458999999965555577778999999997

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.81  E-value=6.9e-18  Score=148.51  Aligned_cols=242  Identities=8%  Similarity=-0.001  Sum_probs=155.8

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCC--CCCeeEEEEEecCCCCeE--EEEEe-------------
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGH--GGPVKGVAWLYNDGKDAA--FISVS-------------  177 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~--~~~v~~l~~~~~~~~~~~--l~s~~-------------  177 (391)
                      .+..++++  +++|++++.+ .|.+|++. ...+..+..+  .+...+++|   ++++++  ++++.             
T Consensus        41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~---spdg~~l~~~~~~~~~~~~~~~~~~~  116 (365)
T 1jof_A           41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDA---DTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCT---TSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEE---CCCCCEEEEEEecCCcceeccceeec
Confidence            45677887  6688888888 99999984 3333222111  133566888   778884  44553             


Q ss_pred             CCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC-CCCCCCCCCCCCCCCccccc
Q psy2107         178 TDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGW-DCLLKIWSAD-ISKERGDPSENGDEGTTSKK  254 (391)
Q Consensus       178 ~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~  254 (391)
                      .+|.+.+|+++........+..+. .+...+.+++|+|+|++++++.. ++.|++||++ +++.                
T Consensus       117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~----------------  180 (365)
T 1jof_A          117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV----------------  180 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE----------------
T ss_pred             CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE----------------
Confidence            689999999753222111222221 24567999999999998887764 6799999997 4321                


Q ss_pred             cccccccCCCCCceeeec--CccCcccEEEeccCC-eEEEEEC-CCeEEEEecc--cCcee---EEEEC-------Ce--
Q psy2107         255 RKKEYSSASSRTPLITLK--GHKEAISAVQWTAVD-EIITSSW-DHTLKIWDAE--LGGMK---SEIVG-------NK--  316 (391)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~-~l~s~~~-dg~i~iwd~~--~~~~~---~~~~~-------~~--  316 (391)
                                 ..+..+.  .|...+..++|+|++ .+++++. ++.|.+|++.  +++..   ..+..       +.  
T Consensus       181 -----------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~  249 (365)
T 1jof_A          181 -----------ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPE  249 (365)
T ss_dssp             -----------EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTT
T ss_pred             -----------EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccc
Confidence                       1122222  235668899999877 4666664 7899999865  45543   22221       12  


Q ss_pred             -----eeEEEE-ECCCCCEEEEeeCC-C-----cEEEEcCC-CCCcceEEEEeccccCcEEEEEECCC--CCCEEEEeeC
Q psy2107         317 -----SFFDVH-YSPLSKLVITASAD-K-----QIRLYDPK-VKEGAIVKSTFSSHKEWVQSVRWSPI--DPQLFVSASF  381 (391)
Q Consensus       317 -----~i~~~~-~~p~~~~l~~g~~d-g-----~i~iwd~~-~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~  381 (391)
                           .+..++ |+|+|++|++++.+ +     .|.+|++. +++..........+...+..++|+|.  ++++|++++.
T Consensus       250 ~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~  329 (365)
T 1jof_A          250 TGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD  329 (365)
T ss_dssp             TSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS
T ss_pred             cccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc
Confidence                 478899 99999988776543 2     89999986 33311111123334555778999993  3455666665


Q ss_pred             -CCcEEEEec
Q psy2107         382 -DNSVKLWDL  390 (391)
Q Consensus       382 -dg~v~iwdl  390 (391)
                       ++.|.+|++
T Consensus       330 ~~~~v~v~~~  339 (365)
T 1jof_A          330 QEGWLEIYRW  339 (365)
T ss_dssp             SSCEEEEEEE
T ss_pred             CCCeEEEEEE
Confidence             589999986

>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A

Probab=99.81  E-value=5.8e-18  Score=158.52  Aligned_cols=261  Identities=12%  Similarity=0.085  Sum_probs=174.4

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCC-CcEEEEEecCC-EEEEEEC---CCeEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHD-DWVSAIDFHND-WILTGCY---DHSVHI  140 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~~~~~~~-~l~t~~~---dg~i~i  140 (391)
                      ....|.+||+.++...         ..++.+++|....   .....+..|. ..|.+++|+++ ++++++.   +...++
T Consensus        25 ~~~~~~~DG~~la~~s---------~~~g~~~lw~~~~---g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l   92 (582)
T 3o4h_A           25 YSLQGVVDGDKLLVVG---------FSEGSVNAYLYDG---GETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHAL   92 (582)
T ss_dssp             EEEEEEETTTEEEEEE---------EETTEEEEEEEET---TEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEE
T ss_pred             heeecCCCCCeEEEEE---------ccCCceeEEEEcC---CCcEeeecccccccccccCCCCeEEEEeccCCCCcceEE
Confidence            4458999998776411         1267788998632   2234444555 68999999966 5555554   454556


Q ss_pred             E--cC--CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCC
Q psy2107         141 W--TR--RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR  216 (391)
Q Consensus       141 w--d~--~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~  216 (391)
                      |  +.  .+... .+.... .+...+|+| ++++..+++++.++ +.+||+.  ++.  ...... +..  .+++|+|+|
T Consensus        93 ~~~~~~~~g~~~-~l~~~~-~~~~~~~s~-dg~~~~~~s~~~~~-~~l~d~~--~g~--~~~l~~-~~~--~~~~~spDG  161 (582)
T 3o4h_A           93 FKVNTSRPGEEQ-RLEAVK-PMRILSGVD-TGEAVVFTGATEDR-VALYALD--GGG--LRELAR-LPG--FGFVSDIRG  161 (582)
T ss_dssp             EEEETTSTTCCE-ECTTSC-SBEEEEEEE-CSSCEEEEEECSSC-EEEEEEE--TTE--EEEEEE-ESS--CEEEEEEET
T ss_pred             EEEeccCCCccc-cccCCC-CceeeeeCC-CCCeEEEEecCCCC-ceEEEcc--CCc--EEEeec-CCC--ceEEECCCC
Confidence            5  44  44444 333222 344667765 34444555555554 5599975  222  222222 222  789999999


Q ss_pred             CEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107         217 QQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT  291 (391)
Q Consensus       217 ~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s  291 (391)
                      ++|++++.+    +.|++||+.+++                              ...+..|...+..++|+|++. |++
T Consensus       162 ~~la~~~~~~~~~~~i~~~d~~~g~------------------------------~~~l~~~~~~~~~~~~SpDG~~l~~  211 (582)
T 3o4h_A          162 DLIAGLGFFGGGRVSLFTSNLSSGG------------------------------LRVFDSGEGSFSSASISPGMKVTAG  211 (582)
T ss_dssp             TEEEEEEEEETTEEEEEEEETTTCC------------------------------CEEECCSSCEEEEEEECTTSCEEEE
T ss_pred             CEEEEEEEcCCCCeEEEEEcCCCCC------------------------------ceEeecCCCccccceECCCCCEEEE
Confidence            999988877    789999987633                              235667888899999998775 676


Q ss_pred             EECCC--eEEEEecccCceeEEEECCe-eeEEEE--------ECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc
Q psy2107         292 SSWDH--TLKIWDAELGGMKSEIVGNK-SFFDVH--------YSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK  360 (391)
Q Consensus       292 ~~~dg--~i~iwd~~~~~~~~~~~~~~-~i~~~~--------~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~  360 (391)
                      +..++  .|++||+.+++.. .+..+. .+..++        |+|+|.++++++.++.+++|++  ++   ...   .+.
T Consensus       212 ~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~---~~~---~~~  282 (582)
T 3o4h_A          212 LETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GE---RVE---APQ  282 (582)
T ss_dssp             EECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TE---EEC---CCS
T ss_pred             ccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CC---eec---cCC
Confidence            77788  8999999988877 444432 444455        9999999999999999999998  32   222   344


Q ss_pred             CcEEEEEECCCCCCEEEEeeCCCc---EEEEec
Q psy2107         361 EWVQSVRWSPIDPQLFVSASFDNS---VKLWDL  390 (391)
Q Consensus       361 ~~v~~~~~~~~~~~~l~s~~~dg~---v~iwdl  390 (391)
                      +.|.+++|+ + +.++++++.+..   +.+||+
T Consensus       283 ~~v~~~~~s-d-g~~l~~~s~~~~p~~l~~~d~  313 (582)
T 3o4h_A          283 GNHGRVVLW-R-GKLVTSHTSLSTPPRIVSLPS  313 (582)
T ss_dssp             SEEEEEEEE-T-TEEEEEEEETTEEEEEEEETT
T ss_pred             CceEEEEec-C-CEEEEEEcCCCCCCeEEEEcC
Confidence            678999999 4 456777777644   666654

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.80  E-value=5.3e-16  Score=131.61  Aligned_cols=233  Identities=15%  Similarity=0.159  Sum_probs=166.6

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEecc------CCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEE
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIP------GHGGPVKGVAWLYNDGKDAAFISVST-DQTAMI  184 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~------~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~i  184 (391)
                      +|-....+++++  ++++++...++.|.+||.++.....+.      ++...+..+++.  ++++.++++... ++.|.+
T Consensus        27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~--~~~g~l~v~~~~~~~~i~~  104 (286)
T 1q7f_A           27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVV--RNSGDIIVTERSPTHQIQI  104 (286)
T ss_dssp             TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEE--TTTTEEEEEECGGGCEEEE
T ss_pred             CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEE--cCCCeEEEEcCCCCCEEEE
Confidence            456678899997  667888788999999999877666553      234567888883  235666666543 889999


Q ss_pred             EeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         185 WEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      |+.  .   ...+..+. .+...+.+++++++++++++...++.|.+||... +                          
T Consensus       105 ~d~--~---g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~--------------------------  152 (286)
T 1q7f_A          105 YNQ--Y---GQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG-N--------------------------  152 (286)
T ss_dssp             ECT--T---SCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS-C--------------------------
T ss_pred             ECC--C---CcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC-C--------------------------
Confidence            982  2   23344443 2345789999999999888877889999999642 1                          


Q ss_pred             CCCceeeec--CccCcccEEEeccCCeEEEE-ECCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCC
Q psy2107         264 SRTPLITLK--GHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADK  337 (391)
Q Consensus       264 ~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg  337 (391)
                         .+..+.  .+...+..+++++++.++.+ ..++.|++||. +++.+..+...   ..+..++++|+|+++++...++
T Consensus       153 ---~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~  228 (286)
T 1q7f_A          153 ---VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN  228 (286)
T ss_dssp             ---EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred             ---EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence               222222  33456789999987776555 56899999997 45666666543   4678999999999888887776


Q ss_pred             -cEEEEcCCCCCcceEEEEecccc--CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         338 -QIRLYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       338 -~i~iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .|.+||.. ++   .+..+..+.  ..+.+++++| +++++++ +.|+.|++|++
T Consensus       229 ~~i~~~~~~-g~---~~~~~~~~~~~~~~~~i~~~~-~g~l~vs-~~~~~v~v~~~  278 (286)
T 1q7f_A          229 FNLTIFTQD-GQ---LISALESKVKHAQCFDVALMD-DGSVVLA-SKDYRLYIYRY  278 (286)
T ss_dssp             CEEEEECTT-SC---EEEEEEESSCCSCEEEEEEET-TTEEEEE-ETTTEEEEEEC
T ss_pred             EEEEEECCC-CC---EEEEEcccCCCCcceeEEECC-CCcEEEE-CCCCeEEEEEc
Confidence             99999964 22   333443333  3478999999 5567777 57999999986

>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A

Probab=99.79  E-value=2.2e-16  Score=138.66  Aligned_cols=241  Identities=9%  Similarity=0.043  Sum_probs=153.4

Q ss_pred             EEEEEEC----CCeEEEEcC--C-CceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCcee
Q psy2107         128 WILTGCY----DHSVHIWTR--R-GEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIE  195 (391)
Q Consensus       128 ~l~t~~~----dg~i~iwd~--~-~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~  195 (391)
                      +++.|++    ++.|.+|.+  . +.... ... +......++|   ++++++|++++.+    +.|.+|+++..+....
T Consensus        15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~---spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~   90 (361)
T 3scy_A           15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIP---SADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLH   90 (361)
T ss_dssp             EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEE---CTTSSEEEEEECCSSTTCEEEEEEEETTTTEEE
T ss_pred             EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEE---CCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEE
Confidence            4556644    468999976  2 22222 222 6777888999   7889989988886    8999999875545556


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      .+.....+......+++  ++++|++++ .++.|.+|++...........            .......   .......+
T Consensus        91 ~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~------------~~~~~g~---~~~~~~~~  153 (361)
T 3scy_A           91 LLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD------------VIEFKGS---GPDKERQT  153 (361)
T ss_dssp             EEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE------------EEECCCC---CSCTTTCS
T ss_pred             EeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce------------eEEccCC---CCCccccC
Confidence            66666656667788888  777777766 578999999975332111000            0000000   00000112


Q ss_pred             cCcccEEEeccCCe-EEEEE-CCCeEEEEecccCce------e--------EEEECCeeeEEEEECCCCCEEEEee-CCC
Q psy2107         275 KEAISAVQWTAVDE-IITSS-WDHTLKIWDAELGGM------K--------SEIVGNKSFFDVHYSPLSKLVITAS-ADK  337 (391)
Q Consensus       275 ~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~~~~~------~--------~~~~~~~~i~~~~~~p~~~~l~~g~-~dg  337 (391)
                      ...+.+++|+|++. +++++ .++.|++|++.....      +        ...........++|+|+|+++++++ .++
T Consensus       154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~  233 (361)
T 3scy_A          154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG  233 (361)
T ss_dssp             SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred             CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence            33457899998775 55555 488999999875431      1        1222334678899999999887776 689


Q ss_pred             cEEEEcCCCCCcceEEEE---eccccCcEEEEEECCCCCCEEEEeeC-CCcEEEEec
Q psy2107         338 QIRLYDPKVKEGAIVKST---FSSHKEWVQSVRWSPIDPQLFVSASF-DNSVKLWDL  390 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~l~s~~~-dg~v~iwdl  390 (391)
                      .|.+|++..+... ....   ...+...+..++|+|++..++++... ++.|.+|++
T Consensus       234 ~v~v~~~~~g~~~-~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~  289 (361)
T 3scy_A          234 TVIAFRYADGMLD-EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKV  289 (361)
T ss_dssp             EEEEEEEETTEEE-EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEE
T ss_pred             eEEEEEecCCceE-EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEE
Confidence            9999998754311 1222   23344567899999955433344445 589999987

>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*

Probab=99.77  E-value=1.2e-16  Score=138.69  Aligned_cols=227  Identities=10%  Similarity=0.001  Sum_probs=151.4

Q ss_pred             cEEEEEec--CCEE-EEEECCCeEEEEcCC-CceEEeccC-C----CCCeeEEEEEecCCCCeEEEEEe-----------
Q psy2107         118 WVSAIDFH--NDWI-LTGCYDHSVHIWTRR-GEHKLNIPG-H----GGPVKGVAWLYNDGKDAAFISVS-----------  177 (391)
Q Consensus       118 ~V~~~~~~--~~~l-~t~~~dg~i~iwd~~-~~~~~~~~~-~----~~~v~~l~~~~~~~~~~~l~s~~-----------  177 (391)
                      .+.+++|+  ++.+ ++++.++.|.+||+. ++.+..+.. +    ...+.+++|   +++++++++++           
T Consensus        35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---s~dg~~l~~~~~~~~~~~~~~~  111 (337)
T 1pby_B           35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAAL---SPDGKTLAIYESPVRLELTHFE  111 (337)
T ss_dssp             CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEE---CTTSSEEEEEEEEEEECSSCEE
T ss_pred             CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEE---CCCCCEEEEEeccccccccccc
Confidence            35677887  5554 556667999999994 444444432 1    226778999   77888888876           


Q ss_pred             -CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC--CC------
Q psy2107         178 -TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG--DE------  248 (391)
Q Consensus       178 -~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~------  248 (391)
                       .++.|.+||+.    ..+.+..+.. ...+.+++|+|++++|+++  ++.|.+||+.+++.........  ..      
T Consensus       112 ~~~~~i~v~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~d  184 (337)
T 1pby_B          112 VQPTRVALYDAE----TLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD  184 (337)
T ss_dssp             ECCCEEEEEETT----TTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCB
T ss_pred             ccCceEEEEECC----CCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCC
Confidence             67999999954    2344444543 4567889999999988887  6889999998776432111100  00      


Q ss_pred             ---Ccccccc-------------------------ccccccCCCCCc-eeeecCccCcccEEEeccCCe-EEEEECCCeE
Q psy2107         249 ---GTTSKKR-------------------------KKEYSSASSRTP-LITLKGHKEAISAVQWTAVDE-IITSSWDHTL  298 (391)
Q Consensus       249 ---~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i  298 (391)
                         .......                         .....+....+. ...+..+...+.+++|+|++. ++++  ++.|
T Consensus       185 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v  262 (337)
T 1pby_B          185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVL  262 (337)
T ss_dssp             CCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEE
T ss_pred             ccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeE
Confidence               0000000                         000111111111 122334455677899997765 5555  7999


Q ss_pred             EEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         299 KIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       299 ~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                      .+||+.+++.+..+.....+.+++|+|+|++|++++.++.|++||+.+++   .+..+..+
T Consensus       263 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~---~~~~~~~~  320 (337)
T 1pby_B          263 ESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE---KKGQVDLP  320 (337)
T ss_dssp             EEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC---EEEEEECG
T ss_pred             EEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc---EEEEEEcC
Confidence            99999999998888877788999999999999988889999999998766   45555433

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.77  E-value=5.2e-16  Score=134.38  Aligned_cols=235  Identities=14%  Similarity=0.143  Sum_probs=169.5

Q ss_pred             CCcEEEEEec--CCEEEEEECC------------------------CeEEEEcCC-CceEEecc-CCCCCeeEEEEEecC
Q psy2107         116 DDWVSAIDFH--NDWILTGCYD------------------------HSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYND  167 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~d------------------------g~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~  167 (391)
                      -+.+.+++++  |+++++.+.+                        +.|.+||.. +....... .+-.....+++   +
T Consensus        23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~---d   99 (329)
T 3fvz_A           23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI---D   99 (329)
T ss_dssp             CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE---C
T ss_pred             cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE---C
Confidence            4578999998  6688777777                        479999995 55544433 34457889999   7


Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE---------ecCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEECCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVC---------RGHERGLETVTVSE-SRQQFATGG-WDCLLKIWSADIS  236 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~-~~~~l~sg~-~dg~i~iwd~~~~  236 (391)
                      ++++++++...++.|++|+..  .. ...+..+         .++......++++| +++++++.+ .++.|++|+.+. 
T Consensus       100 ~~g~l~v~d~~~~~v~~~~~~--g~-~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g-  175 (329)
T 3fvz_A          100 TDGNYWVTDVALHQVFKLDPH--SK-EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG-  175 (329)
T ss_dssp             TTSCEEEEETTTTEEEEECTT--CS-SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS-
T ss_pred             CCCCEEEEECCCCEEEEEeCC--CC-eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC-
Confidence            788888888889999999943  21 1123333         23445789999999 888888876 689999999532 


Q ss_pred             CCCCCCCCCCCCCccccccccccccCCCCCceeeec----------CccCcccEEEeccC-CeEEEE-ECCCeEEEEecc
Q psy2107         237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK----------GHKEAISAVQWTAV-DEIITS-SWDHTLKIWDAE  304 (391)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~-~~l~s~-~~dg~i~iwd~~  304 (391)
                      .                             .+..+.          ++-.....++++++ +.++.+ ..++.|++||..
T Consensus       176 ~-----------------------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~  226 (329)
T 3fvz_A          176 K-----------------------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD  226 (329)
T ss_dssp             C-----------------------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred             C-----------------------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence            2                             112221          12234678999975 665544 568899999999


Q ss_pred             cCceeEEEECC---eeeEEEEECC------CCCEEEEeeCCCcEEEEcCCCCCcceEEEEe---ccccCcEEEEEECCCC
Q psy2107         305 LGGMKSEIVGN---KSFFDVHYSP------LSKLVITASADKQIRLYDPKVKEGAIVKSTF---SSHKEWVQSVRWSPID  372 (391)
Q Consensus       305 ~~~~~~~~~~~---~~i~~~~~~p------~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~  372 (391)
                      +++.+..+...   ..+..++++|      +|+..++...+..|++|++.+++   ++..+   .++...+.+++++| +
T Consensus       227 ~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---~~~~~~~~~~~~~~p~~ia~~~-d  302 (329)
T 3fvz_A          227 TKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---IIDVFKPVRKHFDMPHDIVASE-D  302 (329)
T ss_dssp             TCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCC---EEEEECCSSSCCSSEEEEEECT-T
T ss_pred             CCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---EEEEEcCCCCccCCeeEEEECC-C
Confidence            89988887533   3677899999      33333333445689999988766   55555   46777899999999 5


Q ss_pred             CCEEEEeeCCCcEEEEec
Q psy2107         373 PQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       373 ~~~l~s~~~dg~v~iwdl  390 (391)
                      +.++++...++.|++|++
T Consensus       303 G~lyvad~~~~~I~~~~~  320 (329)
T 3fvz_A          303 GTVYIGDAHTNTVWKFTL  320 (329)
T ss_dssp             SEEEEEESSSCCEEEEEE
T ss_pred             CCEEEEECCCCEEEEEeC
Confidence            588999999999999986

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.74  E-value=6.3e-18  Score=162.33  Aligned_cols=238  Identities=9%  Similarity=0.043  Sum_probs=151.6

Q ss_pred             EEEecCC-EEEEEECCCeEEEEcCCCceEEecc-CCCC---CeeEEEEEecCCCCeEEEEEeC---------CCcEEEEe
Q psy2107         121 AIDFHND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGG---PVKGVAWLYNDGKDAAFISVST---------DQTAMIWE  186 (391)
Q Consensus       121 ~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~---~v~~l~~~~~~~~~~~l~s~~~---------dg~v~iwd  186 (391)
                      +++|+++ .++..+.||.|++||+.+.....+. .|..   .+.+++|   +|++++|++++.         ++.|++||
T Consensus        20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---SpDg~~la~~~~~~~~~~~s~~~~i~~~d   96 (719)
T 1z68_A           20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGL---SPDRQFVYLESDYSKLWRYSYTATYYIYD   96 (719)
T ss_dssp             CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEE---CTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred             ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEE---CCCCCeEEEEecCceeEEeecceEEEEEE
Confidence            4567622 4555567999999999654444433 3322   4899999   889999998876         78999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +.  ++.......+   ...+..++|+|+|+.|+.+. ++.|++||+.+++......                    ...
T Consensus        97 ~~--~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~--------------------~~~  150 (719)
T 1z68_A           97 LS--NGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITF--------------------NGR  150 (719)
T ss_dssp             TT--TTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCC--------------------CCB
T ss_pred             CC--CCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEec--------------------CCC
Confidence            54  3221000111   35688999999999999886 7899999997754321000                    000


Q ss_pred             ceeeecCccCcc---------cEEEeccCCe-EEEEECCC----------------------------------eEEEEe
Q psy2107         267 PLITLKGHKEAI---------SAVQWTAVDE-IITSSWDH----------------------------------TLKIWD  302 (391)
Q Consensus       267 ~~~~~~~~~~~v---------~~~~~~~~~~-l~s~~~dg----------------------------------~i~iwd  302 (391)
                      ....+.++...|         .+++|+|++. |++++.|.                                  .|++||
T Consensus       151 ~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d  230 (719)
T 1z68_A          151 ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIID  230 (719)
T ss_dssp             TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEE
T ss_pred             cCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEE
Confidence            011122333222         5899997765 77776542                                  788999


Q ss_pred             cccCcee--EEE------E-CCeeeEEEEECCCCCEEEEeeCC----CcEEEEc----CCCCCcceEEEEe----ccccC
Q psy2107         303 AELGGMK--SEI------V-GNKSFFDVHYSPLSKLVITASAD----KQIRLYD----PKVKEGAIVKSTF----SSHKE  361 (391)
Q Consensus       303 ~~~~~~~--~~~------~-~~~~i~~~~~~p~~~~l~~g~~d----g~i~iwd----~~~~~~~~~~~~~----~~h~~  361 (391)
                      +.+++..  ..+      . +...+..++|+||++++++....    ..|.+||    +.+++   ....+    .+|..
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~---~~~~~~~~~~~~~~  307 (719)
T 1z68_A          231 TTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWD---CPKTQEHIEESRTG  307 (719)
T ss_dssp             SSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEE---CCGGGEEEEECSSS
T ss_pred             CCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCc---eEEEEecccccCCc
Confidence            9987653  122      1 23478899999998877774433    2488899    66543   22222    35677


Q ss_pred             cEE-----EEEECCCCCCEEE-EeeCCCc--EEEEec
Q psy2107         362 WVQ-----SVRWSPIDPQLFV-SASFDNS--VKLWDL  390 (391)
Q Consensus       362 ~v~-----~~~~~~~~~~~l~-s~~~dg~--v~iwdl  390 (391)
                      .+.     .++|+|++..+++ ++..+|.  |.+||+
T Consensus       308 ~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~  344 (719)
T 1z68_A          308 WAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKD  344 (719)
T ss_dssp             CSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESS
T ss_pred             eEccccCCccEECCCCCeEEEEEEccCCceEEEEEEC
Confidence            776     8899996665444 4556664  555554

>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}

Probab=99.74  E-value=2.6e-17  Score=158.00  Aligned_cols=278  Identities=12%  Similarity=0.066  Sum_probs=173.3

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCC----cEEEEEec--CCEEEEEEC-----
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDD----WVSAIDFH--NDWILTGCY-----  134 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~----~V~~~~~~--~~~l~t~~~-----  134 (391)
                      ..-.|+++|+++...           .++.+.+|......   ...+..+..    .|.+++|+  |++|+.++.     
T Consensus        19 ~~~~~s~dg~~~~~~-----------~d~~i~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~   84 (719)
T 1z68_A           19 FFPNWISGQEYLHQS-----------ADNNIVLYNIETGQ---SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW   84 (719)
T ss_dssp             CCCEESSSSEEEEEC-----------TTSCEEEEESSSCC---EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred             CccEECCCCeEEEEc-----------CCCCEEEEEcCCCc---EEEEEccccccccceeeEEECCCCCeEEEEecCceeE
Confidence            345788999877642           24567777653322   222222222    37888998  678888876     


Q ss_pred             ----CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCe---
Q psy2107         135 ----DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL---  207 (391)
Q Consensus       135 ----dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v---  207 (391)
                          ++.|++||+.+............+..++|   +|+|+.|+.+. ++.|++|++..  +....+ ...++...|   
T Consensus        85 ~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~---SPDG~~la~~~-~~~i~~~~~~~--g~~~~l-~~~~~~~~v~~g  157 (719)
T 1z68_A           85 RYSYTATYYIYDLSNGEFVRGNELPRPIQYLCW---SPVGSKLAYVY-QNNIYLKQRPG--DPPFQI-TFNGRENKIFNG  157 (719)
T ss_dssp             SSCEEEEEEEEETTTTEECCSSCCCSSBCCEEE---CSSTTCEEEEE-TTEEEEESSTT--SCCEEC-CCCCBTTTEEES
T ss_pred             EeecceEEEEEECCCCccccceecCcccccceE---CCCCCEEEEEE-CCeEEEEeCCC--CCcEEE-ecCCCcCCeEcc
Confidence                78999999976655111112356889999   78899898886 78999999642  222111 112222222   


Q ss_pred             --------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEECCCCCCC
Q psy2107         208 --------------ETVTVSESRQQFATGGWDC----------------------------------LLKIWSADISKER  239 (391)
Q Consensus       208 --------------~~l~~~~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~  239 (391)
                                    .+++|+|||++|++++.|.                                  .|++||+.+++..
T Consensus       158 ~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~  237 (719)
T 1z68_A          158 IPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYV  237 (719)
T ss_dssp             SCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHH
T ss_pred             cccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcc
Confidence                          5899999999999988652                                  5566666543210


Q ss_pred             CCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CC----CeEEEEe----cccCceeE
Q psy2107         240 GDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WD----HTLKIWD----AELGGMKS  310 (391)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d----g~i~iwd----~~~~~~~~  310 (391)
                      ..                     ........+.+|...+..++|+|++.++... ..    ..|.+||    +.+++...
T Consensus       238 ~~---------------------~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~  296 (719)
T 1z68_A          238 GP---------------------QEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPK  296 (719)
T ss_dssp             CC---------------------EECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred             ce---------------------eEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence            00                     0000001234678889999999888755442 22    2488899    77776544


Q ss_pred             EE----ECC-eeeE-----EEEECCCCCEEEE--eeCCC--cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         311 EI----VGN-KSFF-----DVHYSPLSKLVIT--ASADK--QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       311 ~~----~~~-~~i~-----~~~~~p~~~~l~~--g~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      .+    ..+ ..+.     .+.|+|+|+.++.  +..+|  .|++||+..+.    ...+..+...+..+.++ +++.++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~----~~~lt~~~~~v~~~~~~-d~~~i~  371 (719)
T 1z68_A          297 TQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN----AIQITSGKWEAINIFRV-TQDSLF  371 (719)
T ss_dssp             GGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT----CEECSCSSSCEEEEEEE-CSSEEE
T ss_pred             EEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc----eEecccCceEEEEEEEE-eCCEEE
Confidence            43    233 2444     7899999996554  44455  57777876544    23455566668887777 576666


Q ss_pred             EEeeC----CCcEEEEec
Q psy2107         377 VSASF----DNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~----dg~v~iwdl  390 (391)
                      +++..    ++.+++|.+
T Consensus       372 ~~~~~~~~~~~~~~l~~~  389 (719)
T 1z68_A          372 YSSNEFEEYPGRRNIYRI  389 (719)
T ss_dssp             EEESCGGGCTTCBEEEEE
T ss_pred             EEEecCCCCCceEEEEEE
Confidence            66554    588999975

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.72  E-value=1.1e-15  Score=145.31  Aligned_cols=244  Identities=11%  Similarity=0.056  Sum_probs=162.4

Q ss_pred             cccCCCCcEEEEEecCCEEE--EE--ECCCeEEEEcC-CCceEEeccCCCCCee---------EEEEEecCCCCeE-EEE
Q psy2107         111 DCILHDDWVSAIDFHNDWIL--TG--CYDHSVHIWTR-RGEHKLNIPGHGGPVK---------GVAWLYNDGKDAA-FIS  175 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~~l~--t~--~~dg~i~iwd~-~~~~~~~~~~~~~~v~---------~l~~~~~~~~~~~-l~s  175 (391)
                      .+.+|...|..++++++.++  +.  +.++...||.. .+.....+..+...+.         ...|+. +|+++. |+.
T Consensus        18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-SPDg~~~la~   96 (662)
T 3azo_A           18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVP-RPAGGPLLVF   96 (662)
T ss_dssp             HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEEC-CSSSSCEEEE
T ss_pred             HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeee-ecCCCeEEEE
Confidence            34568899999999987443  33  33788999984 5566667777776666         666642 267777 665


Q ss_pred             EeC-CCcEEEEeecCC--C-CceeEEEEEec-----CCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCCC
Q psy2107         176 VST-DQTAMIWEWKVE--S-NSIECIHVCRG-----HERGLETVTVSESRQQFATGGWD----------CLLKIWSADIS  236 (391)
Q Consensus       176 ~~~-dg~v~iwd~~~~--~-~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~sg~~d----------g~i~iwd~~~~  236 (391)
                      ++. +..|.+++  ..  . ..   ...+..     |...+..++|+|+|+.|+.++.+          ..|++||+.+.
T Consensus        97 ~~~~~~~l~~~~--~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~  171 (662)
T 3azo_A           97 THFGDQRLYAFE--PDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS  171 (662)
T ss_dssp             EBTTTCCEEEEC--TTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred             EECCCCeEEEEc--CCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence            543 44555554  33  1 22   223333     56678999999999999998877          57999998751


Q ss_pred             CCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEeccCCe-EEEEECC--------CeEEEEecc-c
Q psy2107         237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE-IITSSWD--------HTLKIWDAE-L  305 (391)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~~d--------g~i~iwd~~-~  305 (391)
                      ...                        .......+. .+...+..++|+|++. |+.++.+        ..|++||+. +
T Consensus       172 ~~~------------------------~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~  227 (662)
T 3azo_A          172 AAA------------------------DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTED  227 (662)
T ss_dssp             TTT------------------------CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTT
T ss_pred             ccc------------------------cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCC
Confidence            000                        001122333 4456778889997775 6666644        479999998 5


Q ss_pred             C---ceeEEEEC-CeeeEEEEECCCCCEEEEeeCCC--cEEEEcCCCCCcceEEEEeccccCc--------EEEEEECCC
Q psy2107         306 G---GMKSEIVG-NKSFFDVHYSPLSKLVITASADK--QIRLYDPKVKEGAIVKSTFSSHKEW--------VQSVRWSPI  371 (391)
Q Consensus       306 ~---~~~~~~~~-~~~i~~~~~~p~~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~--------v~~~~~~~~  371 (391)
                      +   +....... ...+..++|+|+|++++++..++  .|++||+..++   .......+...        +.+++|+| 
T Consensus       228 g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~---~~~l~~~~~~~~~p~w~~~~~~~~~~~-  303 (662)
T 3azo_A          228 GRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA---ATQLCRREEEFAGPLWTPGMRWFAPLA-  303 (662)
T ss_dssp             SCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC---EEESSCCSSBSSCCCCSTTCCSEEECT-
T ss_pred             CcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc---eeecccccccccCccccccCceEeEeC-
Confidence            6   44444444 46788999999999888888788  66677765544   33233333222        56788998 


Q ss_pred             CCCEEEEeeCCCcEEEEe
Q psy2107         372 DPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwd  389 (391)
                      ++.++++++. +.++||.
T Consensus       304 ~~~~~~~~~~-~~~~l~~  320 (662)
T 3azo_A          304 NGLIAVVHGK-GAAVLGI  320 (662)
T ss_dssp             TSCEEEEEBS-SSCEEEE
T ss_pred             CCEEEEEEEc-CccEEEE
Confidence            6678899988 9999994

>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1

Probab=99.70  E-value=1.5e-14  Score=127.07  Aligned_cols=230  Identities=8%  Similarity=0.051  Sum_probs=144.5

Q ss_pred             EEEEEECC--CeEEEEcC--CCceEEecc----CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE
Q psy2107         128 WILTGCYD--HSVHIWTR--RGEHKLNIP----GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV  199 (391)
Q Consensus       128 ~l~t~~~d--g~i~iwd~--~~~~~~~~~----~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~  199 (391)
                      .++.|++.  +.|.+|++  .+..+..+.    .....+..++|   ++++++|++++.+ .|.+|++.. ......+..
T Consensus         4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~---spdg~~l~~~~~~-~v~~~~~~~-~g~~~~~~~   78 (365)
T 1jof_A            4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTF---DHERKNIYGAAMK-KWSSFAVKS-PTEIVHEAS   78 (365)
T ss_dssp             EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEE---CTTSSEEEEEEBT-EEEEEEEEE-TTEEEEEEE
T ss_pred             EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEE---CCCCCEEEEEccc-eEEEEEECC-CCCEEEeeE
Confidence            45666664  56887765  333332221    23346788999   7889989888887 999999752 222222222


Q ss_pred             EecCCCCeEEEEEcCCCCE--EEEEe-------------CCCcEEEEECCC-CCCCCCCCCCCCCCccccccccccccCC
Q psy2107         200 CRGHERGLETVTVSESRQQ--FATGG-------------WDCLLKIWSADI-SKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       200 ~~~~~~~v~~l~~~~~~~~--l~sg~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      ...+ +.+.+++|+|++++  +++++             .+|.+.+|+++. ++.                         
T Consensus        79 ~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~-------------------------  132 (365)
T 1jof_A           79 HPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKL-------------------------  132 (365)
T ss_dssp             EECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCE-------------------------
T ss_pred             eecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcC-------------------------
Confidence            2211 23566899999994  45553             689999999963 211                         


Q ss_pred             CCCceeeec-CccCcccEEEeccCCe-EEEEE-CCCeEEEEecc-cCcee--EEEEC---CeeeEEEEECCCCCEEEEee
Q psy2107         264 SRTPLITLK-GHKEAISAVQWTAVDE-IITSS-WDHTLKIWDAE-LGGMK--SEIVG---NKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       264 ~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~-~dg~i~iwd~~-~~~~~--~~~~~---~~~i~~~~~~p~~~~l~~g~  334 (391)
                       ...+..+. .+...+.+++|+|++. ++++. .++.|++||+. +++..  ..+..   ...+..++|+|+|+++++++
T Consensus       133 -~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~  211 (365)
T 1jof_A          133 -EKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM  211 (365)
T ss_dssp             -EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred             -cceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence             00111111 2456788999998775 66655 36899999998 67653  33431   34688999999999988776


Q ss_pred             C-CCcEEEEcCCCCCcceE-----EEEec----cccC------cEEEEE-ECCCCCCEEEEeeC-CC-----cEEEEec
Q psy2107         335 A-DKQIRLYDPKVKEGAIV-----KSTFS----SHKE------WVQSVR-WSPIDPQLFVSASF-DN-----SVKLWDL  390 (391)
Q Consensus       335 ~-dg~i~iwd~~~~~~~~~-----~~~~~----~h~~------~v~~~~-~~~~~~~~l~s~~~-dg-----~v~iwdl  390 (391)
                      . ++.|.+|++....+...     +..+.    +|..      .+..++ |+|++ ++|++++. ++     .|.+|++
T Consensus       212 ~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~~~~~~~~i~v~~~  289 (365)
T 1jof_A          212 EAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRANKFELQGYIAGFKL  289 (365)
T ss_dssp             TTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEESSTTSCCEEEEEEE
T ss_pred             CCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCCCCCCCCeEEEEEE
Confidence            4 68999997653222211     11222    2232      589999 99954 55555443 33     8999987

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.69  E-value=3.2e-14  Score=136.20  Aligned_cols=247  Identities=11%  Similarity=-0.020  Sum_probs=160.7

Q ss_pred             CCCcEEEEEec--CCEEEEEECCC-----eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDH-----SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------  181 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------  181 (391)
                      |...+..++|+  |++||.++.++     .|++||+.+............+..++|   +++++.|+.++.++.      
T Consensus       123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~w---spDg~~l~~~~~~~~~~~~~~  199 (710)
T 2xdw_A          123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAW---THDGKGMFYNAYPQQDGKSDG  199 (710)
T ss_dssp             SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEE---CTTSSEEEEEECCCCSSCCSS
T ss_pred             CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEE---EeCCCEEEEEEECCccccccc
Confidence            54568889998  56777666543     899999966554432222223678999   778999998888766      


Q ss_pred             ----------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCCCCCCCCCCC
Q psy2107         182 ----------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-----DCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       182 ----------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                                |++|++.........+.....|...+..+.|+|+|++|+.++.     +..|.+||+.+.....      
T Consensus       200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~------  273 (710)
T 2xdw_A          200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI------  273 (710)
T ss_dssp             SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS------
T ss_pred             cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc------
Confidence                      8999864322222233333334556889999999999987765     5689999986510000      


Q ss_pred             CCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEECC----CeEEEEecccCce--eEEEECC-e--
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSSWD----HTLKIWDAELGGM--KSEIVGN-K--  316 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~~d----g~i~iwd~~~~~~--~~~~~~~-~--  316 (391)
                                      ........+..+...+... |+ +++.|+..+..    +.|.+||+.++..  ...+..+ .  
T Consensus       274 ----------------~~~~~~~~l~~~~~~~~~~-~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~  336 (710)
T 2xdw_A          274 ----------------TGILKWVKLIDNFEGEYDY-VTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD  336 (710)
T ss_dssp             ----------------CSSCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred             ----------------CCccceEEeeCCCCcEEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC
Confidence                            0000233444555555543 55 45566655543    3699999987742  2344333 2  


Q ss_pred             eeEEEEECCCCCEEEEeeCCCc--EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeC---CCcEEEEec
Q psy2107         317 SFFDVHYSPLSKLVITASADKQ--IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF---DNSVKLWDL  390 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwdl  390 (391)
                      .+..++|++++.+++++..++.  |++|++.+++   ....+..+.+.+..++++|++..++++.+.   .+.|++||+
T Consensus       337 ~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~---~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~  412 (710)
T 2xdw_A          337 VLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA---LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL  412 (710)
T ss_dssp             EEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC---EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred             eEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC---EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence            5778899887888888888874  5666765544   445566677889999999965555555443   478999986

>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*

Probab=99.69  E-value=3.5e-15  Score=130.19  Aligned_cols=221  Identities=6%  Similarity=-0.023  Sum_probs=141.6

Q ss_pred             cEEEEEec--CCEE-EEEECCCeEEEEcCCC-ceEEeccCC------CCCeeEEEEEecCCCCeEEEEEeCC--------
Q psy2107         118 WVSAIDFH--NDWI-LTGCYDHSVHIWTRRG-EHKLNIPGH------GGPVKGVAWLYNDGKDAAFISVSTD--------  179 (391)
Q Consensus       118 ~V~~~~~~--~~~l-~t~~~dg~i~iwd~~~-~~~~~~~~~------~~~v~~l~~~~~~~~~~~l~s~~~d--------  179 (391)
                      .+..++|+  ++.+ +++..++.|.+||+.+ +....+...      ...+.+++|   +++++++++++.+        
T Consensus        44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~l~~~~~~~~~~~~~~  120 (349)
T 1jmx_B           44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI---SPDGKEVYATVNPTQRLNDHY  120 (349)
T ss_dssp             SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEE---CTTSSEEEEEEEEEEECSSCE
T ss_pred             CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEE---CCCCCEEEEEccccccccccc
Confidence            45677787  5544 5556789999999954 444444422      233788999   7789888888865        


Q ss_pred             ----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCC--CCCcc--
Q psy2107         180 ----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENG--DEGTT--  251 (391)
Q Consensus       180 ----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~--  251 (391)
                          +.|.+||+.... ....+..+.. ...+.+++|+|+++ +++++.  .|.+||..+++.........  .....  
T Consensus       121 ~~~~~~i~~~d~~~~~-~~~~~~~~~~-~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~  195 (349)
T 1jmx_B          121 VVKPPRLEVFSTADGL-EAKPVRTFPM-PRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAP  195 (349)
T ss_dssp             EECCCEEEEEEGGGGG-GBCCSEEEEC-CSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred             ccCCCeEEEEECCCcc-ccceeeeccC-CCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCc
Confidence                899999975321 1222333333 34688999999999 555543  49999998766432211110  00000  


Q ss_pred             --------c-------ccccccc-------------------ccCCCCC-ceeeecCccCcccEEEecc-CCe-EEEEEC
Q psy2107         252 --------S-------KKRKKEY-------------------SSASSRT-PLITLKGHKEAISAVQWTA-VDE-IITSSW  294 (391)
Q Consensus       252 --------~-------~~~~~~~-------------------~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~  294 (391)
                              .       .......                   .+..... ....+..+...+..++|+| ++. ++++  
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--  273 (349)
T 1jmx_B          196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--  273 (349)
T ss_dssp             BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--
T ss_pred             cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--
Confidence                    0       0000000                   0000000 0111122344567888888 775 4444  


Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      ++.|.+||+.+++.+..+.....+.+++|+|++++|++++.++.|++||+.+.+
T Consensus       274 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~  327 (349)
T 1jmx_B          274 LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE  327 (349)
T ss_dssp             ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred             cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence            899999999999998888877778899999999988888889999999987755

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.69  E-value=7.4e-14  Score=117.22  Aligned_cols=209  Identities=7%  Similarity=0.018  Sum_probs=155.8

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCCC-CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGHG-GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~-~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      +++|++++.|+.|.+||. +++.+.++..+. ..+.++.+   .+++++++  +.++.|..||.     +.+.+..+..+
T Consensus         5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~---~pdG~ilv--s~~~~V~~~d~-----~G~~~W~~~~~   74 (276)
T 3no2_A            5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAA---TKAGEILF--SYSKGAKMITR-----DGRELWNIAAP   74 (276)
T ss_dssp             CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEE---CTTSCEEE--ECBSEEEEECT-----TSCEEEEEECC
T ss_pred             CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEE---CCCCCEEE--eCCCCEEEECC-----CCCEEEEEcCC
Confidence            568999999999999999 888888888765 47888998   67888888  45788999983     23456666654


Q ss_pred             -CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------Ccc
Q psy2107         204 -ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHK  275 (391)
Q Consensus       204 -~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  275 (391)
                       ...+.++.+.++|+++++.+. ++.|..+|.+ ++.                             +..+.      .+.
T Consensus        75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~-Gk~-----------------------------l~~~~~~~~~~~~~  124 (276)
T 3no2_A           75 AGCEMQTARILPDGNALVAWCGHPSTILEVNMK-GEV-----------------------------LSKTEFETGIERPH  124 (276)
T ss_dssp             TTCEEEEEEECTTSCEEEEEESTTEEEEEECTT-SCE-----------------------------EEEEEECCSCSSGG
T ss_pred             CCccccccEECCCCCEEEEecCCCCEEEEEeCC-CCE-----------------------------EEEEeccCCCCccc
Confidence             347889999999999999887 7777777753 221                             11111      122


Q ss_pred             CcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         276 EAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       276 ~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      .....+++.++ +.+++...++.|..||.. |+.+.++.......++...++|+++++++.++.|..+|..+++   .+.
T Consensus       125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~---~~w  200 (276)
T 3no2_A          125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNR---IVR  200 (276)
T ss_dssp             GSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCC---EEE
T ss_pred             ccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCc---EEE
Confidence            23445566644 457777789999999998 9999999887767778889999999999888899999988776   555


Q ss_pred             Eecccc------CcEEEEEECCCCCCEEEEe
Q psy2107         355 TFSSHK------EWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       355 ~~~~h~------~~v~~~~~~~~~~~~l~s~  379 (391)
                      .+..+.      ..+..++..+ ++.++++.
T Consensus       201 ~~~~~~~~~~~l~~~~~~~~~~-~G~i~v~~  230 (276)
T 3no2_A          201 RVNANDIEGVQLFFVAQLFPLQ-NGGLYICN  230 (276)
T ss_dssp             EEEGGGSBSCCCSEEEEEEECT-TSCEEEEE
T ss_pred             EecCCCCCCccccccccceEcC-CCCEEEEe
Confidence            554332      2378888888 66666665

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.68  E-value=2.2e-15  Score=144.91  Aligned_cols=241  Identities=9%  Similarity=0.119  Sum_probs=149.8

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCC-----eeEEEEEecCCCCeEEEEEeCC---------Cc
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGP-----VKGVAWLYNDGKDAAFISVSTD---------QT  181 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~-----v~~l~~~~~~~~~~~l~s~~~d---------g~  181 (391)
                      ..+++|+  +++++++  ||.|++||+. +.....+..|...     ...++|   +|++++|+.++.+         +.
T Consensus        19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Spdg~~l~~~~~~~~~~r~~~~~~   93 (740)
T 4a5s_A           19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSI---SPDGQFILLEYNYVKQWRHSYTAS   93 (740)
T ss_dssp             CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEE---CTTSSEEEEEEEEEECSSSCEEEE
T ss_pred             ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEE---CCCCCEEEEEECCeeeEEEccceE
Confidence            4467887  4466665  9999999994 4445555555532     234788   8899999998876         55


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      +.+||+.  ++.   ...+..|...+...+|||+|+.||.+. ++.|++|++.++....... .                
T Consensus        94 ~~~~d~~--~~~---~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-~----------------  150 (740)
T 4a5s_A           94 YDIYDLN--KRQ---LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-T----------------  150 (740)
T ss_dssp             EEEEETT--TTE---ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS-C----------------
T ss_pred             EEEEECC--CCc---EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC-C----------------
Confidence            6799954  332   233556778899999999999998884 6899999997755321100 0                


Q ss_pred             CCCCCceeeecCcc---------CcccEEEeccCCe-EEEEECC------------------------------------
Q psy2107         262 ASSRTPLITLKGHK---------EAISAVQWTAVDE-IITSSWD------------------------------------  295 (391)
Q Consensus       262 ~~~~~~~~~~~~~~---------~~v~~~~~~~~~~-l~s~~~d------------------------------------  295 (391)
                         ......+.++.         .....+.|+|++. |+.++.|                                    
T Consensus       151 ---g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~  227 (740)
T 4a5s_A          151 ---GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPT  227 (740)
T ss_dssp             ---CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCE
T ss_pred             ---CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCe
Confidence               00111122222         1223577887664 5555322                                    


Q ss_pred             CeEEEEeccc---Cc--eeEEEE-------CCeeeEEEEECCCCCEEEEeeC----CCcEEEEcCCCCCc----ce-EEE
Q psy2107         296 HTLKIWDAEL---GG--MKSEIV-------GNKSFFDVHYSPLSKLVITASA----DKQIRLYDPKVKEG----AI-VKS  354 (391)
Q Consensus       296 g~i~iwd~~~---~~--~~~~~~-------~~~~i~~~~~~p~~~~l~~g~~----dg~i~iwd~~~~~~----~~-~~~  354 (391)
                      ..|++||+.+   ++  ....+.       ....+..++|+|+|+.++....    +..|++||+.+++.    .. ...
T Consensus       228 ~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l  307 (740)
T 4a5s_A          228 VKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQH  307 (740)
T ss_dssp             EEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCE
T ss_pred             eEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEe
Confidence            1588899988   73  223333       3346889999999997665432    34799999887651    00 001


Q ss_pred             EeccccCcEE-----EEEECCCCCCEEEEee-CCC--cEEEEec
Q psy2107         355 TFSSHKEWVQ-----SVRWSPIDPQLFVSAS-FDN--SVKLWDL  390 (391)
Q Consensus       355 ~~~~h~~~v~-----~~~~~~~~~~~l~s~~-~dg--~v~iwdl  390 (391)
                      .-.+|...|.     ..+|+||+..+++..+ .+|  .|++||+
T Consensus       308 ~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~  351 (740)
T 4a5s_A          308 IEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQI  351 (740)
T ss_dssp             EEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEET
T ss_pred             eeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEEC
Confidence            1134655554     7889995554442554 444  4666664

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.68  E-value=1.1e-14  Score=129.08  Aligned_cols=232  Identities=11%  Similarity=0.048  Sum_probs=147.1

Q ss_pred             EEec--CCEEEEEEC-CC--eEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         122 IDFH--NDWILTGCY-DH--SVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       122 ~~~~--~~~l~t~~~-dg--~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      .+|+  |+.|+.++. +|  .|.+||+.+.....+ ..+...+..+.|   +++++.|+.++.++.|++||+.  +....
T Consensus        41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~--~g~~~  115 (388)
T 3pe7_A           41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFL---SPDDDALFYVKDGRNLMRVDLA--TLEEN  115 (388)
T ss_dssp             CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEE---CTTSSEEEEEETTTEEEEEETT--TCCEE
T ss_pred             ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEE---cCCCCEEEEEeCCCeEEEEECC--CCcce
Confidence            5676  778888887 67  488889866555544 445555557889   8899999999999999999964  33323


Q ss_pred             EEEEEecCCCCeEEEE--EcCCCCEEEEE----------------------eCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         196 CIHVCRGHERGLETVT--VSESRQQFATG----------------------GWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~--~~~~~~~l~sg----------------------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                        .....+...+....  ++|++++++..                      ..+..|.+||+.+++              
T Consensus       116 --~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--------------  179 (388)
T 3pe7_A          116 --VVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--------------  179 (388)
T ss_dssp             --EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------------
T ss_pred             --eeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------------
Confidence              33344455454343  48999988743                      234678888887632              


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEecc-CCe-EEEEECC------CeEEEEecccCceeEEEECC--eeeEEE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDE-IITSSWD------HTLKIWDAELGGMKSEIVGN--KSFFDV  321 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~d------g~i~iwd~~~~~~~~~~~~~--~~i~~~  321 (391)
                                      ...+..+...+..+.|+| ++. |+.++.+      ..|.++|+..+.........  ..+...
T Consensus       180 ----------------~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~  243 (388)
T 3pe7_A          180 ----------------STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHE  243 (388)
T ss_dssp             ----------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEE
T ss_pred             ----------------eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccc
Confidence                            233444566788999999 765 5555543      37888887765543333333  357788


Q ss_pred             EECCCCCEEEEeeC-CC----cEEEEcCCCCCcceEEEEeccccCc---EEEEEECCCCCCEEEEe--------eCCCcE
Q psy2107         322 HYSPLSKLVITASA-DK----QIRLYDPKVKEGAIVKSTFSSHKEW---VQSVRWSPIDPQLFVSA--------SFDNSV  385 (391)
Q Consensus       322 ~~~p~~~~l~~g~~-dg----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~~~~~~~~~~~l~s~--------~~dg~v  385 (391)
                      +|+|+|+.|+..+. ++    .|++||+.+++.. .+..+.++...   ...++|+|++..++++.        ..+..|
T Consensus       244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i  322 (388)
T 3pe7_A          244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENR-QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFL  322 (388)
T ss_dssp             EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE-EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEE
T ss_pred             eECCCCCEEEEEecCCCCCcceEEEEecCCCceE-EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEE
Confidence            99999997765443 22    3999999876532 22233331111   11236999665544433        456789


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      ++||+.
T Consensus       323 ~~~d~~  328 (388)
T 3pe7_A          323 YVFNMK  328 (388)
T ss_dssp             EEEETT
T ss_pred             EEEecc
Confidence            999973

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.68  E-value=4.6e-14  Score=120.25  Aligned_cols=225  Identities=8%  Similarity=0.056  Sum_probs=152.2

Q ss_pred             CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      +.....+++|+  ++ +++++..++.|..|+..+. ...+..+...+.++++   ++++.++++...++.|.+||..  +
T Consensus        26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~---~~dg~l~v~~~~~~~i~~~d~~--~   99 (296)
T 3e5z_A           26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCL---NKQGHLIACSHGLRRLERQREP--G   99 (296)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEE---CTTCCEEEEETTTTEEEEECST--T
T ss_pred             CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeE---CCCCcEEEEecCCCeEEEEcCC--C
Confidence            44567788887  66 7888888999999999776 6666677788999999   7788888777777899999953  3


Q ss_pred             CceeEEEEE-ec-CCCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         192 NSIECIHVC-RG-HERGLETVTVSESRQQFAT----GGW-------------DCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       192 ~~~~~~~~~-~~-~~~~v~~l~~~~~~~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      .....+... .+ ....+..++++|+|+++++    |+.             .+.|..++..                  
T Consensus       100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------------------  161 (296)
T 3e5z_A          100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------------------  161 (296)
T ss_dssp             CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------------------
T ss_pred             CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC------------------
Confidence            332222111 11 1234678999999998887    331             2344444432                  


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecc-cCce---eEEEE-CCeeeEEEEECCC
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAE-LGGM---KSEIV-GNKSFFDVHYSPL  326 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~-~~~~---~~~~~-~~~~i~~~~~~p~  326 (391)
                                   .....+..+......++|++++. +++.+.++.|.+||+. ++..   ...+. ....+..++++++
T Consensus       162 -------------g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~  228 (296)
T 3e5z_A          162 -------------GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAG  228 (296)
T ss_dssp             -------------SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTT
T ss_pred             -------------CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCC
Confidence                         12223344555668899997665 5555668899999987 5554   22331 1224567999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE-CCCCCCEEEEeeCCCc
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW-SPIDPQLFVSASFDNS  384 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~l~s~~~dg~  384 (391)
                      |+++++.  ++.|.+||.. ++   ....+..+.. +++++| .| ++..|+.++.++.
T Consensus       229 G~l~v~~--~~~v~~~~~~-g~---~~~~~~~~~~-~~~~~f~~~-d~~~L~v~t~~~l  279 (296)
T 3e5z_A          229 GLIWASA--GDGVHVLTPD-GD---ELGRVLTPQT-TSNLCFGGP-EGRTLYMTVSTEF  279 (296)
T ss_dssp             SCEEEEE--TTEEEEECTT-SC---EEEEEECSSC-CCEEEEEST-TSCEEEEEETTEE
T ss_pred             CCEEEEc--CCeEEEECCC-CC---EEEEEECCCC-ceeEEEECC-CCCEEEEEcCCeE
Confidence            9877665  7889999975 33   4556666666 899999 57 5555666666643

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.67  E-value=1.1e-13  Score=116.24  Aligned_cols=231  Identities=9%  Similarity=-0.014  Sum_probs=155.6

Q ss_pred             cEEEEEec--CCEEE-EEECCCeEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         118 WVSAIDFH--NDWIL-TGCYDHSVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       118 ~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ...+++++  +++++ +.+.++.|.+|+..+.....+ ..+...+.++++   ++++.++++.. ++.|.+||..  ...
T Consensus        25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~---~~~g~l~v~~~-~~~i~~~d~~--~~~   98 (270)
T 1rwi_B           25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAV---DGAGTVYVTDF-NNRVVTLAAG--SNN   98 (270)
T ss_dssp             CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEE---CTTCCEEEEET-TTEEEEECTT--CSC
T ss_pred             CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEE---CCCCCEEEEcC-CCEEEEEeCC--Cce
Confidence            66788886  55666 446789999999855443333 233356788999   67777666655 8899999843  222


Q ss_pred             eeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         194 IECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       194 ~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      .   ..+. .....+..++++++++++++...++.|.+|+..+..                             ......
T Consensus        99 ~---~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~-----------------------------~~~~~~  146 (270)
T 1rwi_B           99 Q---TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT-----------------------------QTVLPF  146 (270)
T ss_dssp             C---EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS-----------------------------CEECCC
T ss_pred             E---eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce-----------------------------eEeecc
Confidence            1   1222 223578999999999977777778899999754311                             111111


Q ss_pred             CccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc
Q psy2107         273 GHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA  350 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~  350 (391)
                      .....+..+++++++.++.+. .++.|.+||............. ..+..++++++|.++++...++.|.+|+.....  
T Consensus       147 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~--  224 (270)
T 1rwi_B          147 TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT--  224 (270)
T ss_dssp             CSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC--
T ss_pred             ccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc--
Confidence            223456789999766655554 5789999998766544322222 467889999999887777778899999986543  


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .......+...+.++++++ ++.++++...++.|+++++
T Consensus       225 -~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~v~~~~~  262 (270)
T 1rwi_B          225 -STVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLTS  262 (270)
T ss_dssp             -CEECCCCSCSCEEEEEECT-TCCEEEEEGGGTEEEEECC
T ss_pred             -ceeeccCCCCCceeEEECC-CCCEEEEECCCCEEEEEcC
Confidence             2222223345789999999 4578889889999999986

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.67  E-value=2.2e-14  Score=124.37  Aligned_cols=235  Identities=11%  Similarity=0.082  Sum_probs=157.9

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      .|.+++|+  +..++..+.++.++.|  .+.....+..+...+.+++|   ++++.+++++..++.|.+||..  ...  
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~g~l~~~~~~~~~i~~~d~~--~~~--   77 (333)
T 2dg1_A            7 DLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNF---DRQGQLFLLDVFEGNIFKINPE--TKE--   77 (333)
T ss_dssp             CCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEE---CTTSCEEEEETTTCEEEEECTT--TCC--
T ss_pred             ccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEE---CCCCCEEEEECCCCEEEEEeCC--CCc--
Confidence            45667777  3355555778888888  45555666677777899999   7788888888889999999843  332  


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                      .......+...+.+++++++++++++...+    +.|.+||.+++...                           .....
T Consensus        78 ~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~---------------------------~~~~~  130 (333)
T 2dg1_A           78 IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ---------------------------DIIED  130 (333)
T ss_dssp             EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE---------------------------EEECS
T ss_pred             EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE---------------------------EEEcc
Confidence            222223456789999999999988777666    68999998763320                           00000


Q ss_pred             cCccCcccEEEeccCCeEEEEECC-------CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEc
Q psy2107         272 KGHKEAISAVQWTAVDEIITSSWD-------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYD  343 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd  343 (391)
                      ..+...+..+++++++.++.++..       +.|..+|..+++..........+..++|+|+++.|+ +.+.++.|++||
T Consensus       131 ~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d  210 (333)
T 2dg1_A          131 LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIA  210 (333)
T ss_dssp             SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred             CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEE
Confidence            123456788999987776666553       567777766555443333223567899999998654 445678999999


Q ss_pred             CCCCCcce------EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         344 PKVKEGAI------VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.......      ....+.++ ..+..+++++ +++++++...++.|.+||.
T Consensus       211 ~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~  261 (333)
T 2dg1_A          211 LEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNK  261 (333)
T ss_dssp             ECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECT
T ss_pred             ecCCCcCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECC
Confidence            86421111      11112222 4688999999 5677777777899999985

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.67  E-value=7.4e-14  Score=121.81  Aligned_cols=220  Identities=12%  Similarity=0.173  Sum_probs=141.7

Q ss_pred             CcEEEEEecCCEEEEEE---------CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEE
Q psy2107         117 DWVSAIDFHNDWILTGC---------YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMI  184 (391)
Q Consensus       117 ~~V~~~~~~~~~l~t~~---------~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~i  184 (391)
                      ..+...+++|+.++...         .++.|.+||+.+.....+    ..+..++|   +|+++.|+.++.+   +...+
T Consensus        15 ~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~---SpDg~~la~~~~~~~~~~~~l   87 (347)
T 2gop_A           15 AYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRI---SPDGKKIAFMRANEEKKVSEI   87 (347)
T ss_dssp             CEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEE---CTTSSEEEEEEEETTTTEEEE
T ss_pred             EEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEE---CCCCCEEEEEEeccCCCcceE
Confidence            45666666777666542         367899999966555555    56888999   7889888877654   45444


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEECCCCC
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD---------------------------CLLKIWSADISK  237 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d---------------------------g~i~iwd~~~~~  237 (391)
                      |-++...+...  ..... .. +..++|+|+++.|+.++.+                           ..|.+||+.+++
T Consensus        88 ~~~~~~~g~~~--~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~  163 (347)
T 2gop_A           88 WVADLETLSSK--KILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE  163 (347)
T ss_dssp             EEEETTTTEEE--EEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred             EEEECCCCceE--EEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence            44334343322  22222 33 9999999999998887643                           457778876522


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECC------C-eEEEEecccCceeE
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD------H-TLKIWDAELGGMKS  310 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d------g-~i~iwd~~~~~~~~  310 (391)
                                                   .+..+.. . .+..+.|+|++.++++..+      . ...+|.+.+++...
T Consensus       164 -----------------------------~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~  212 (347)
T 2gop_A          164 -----------------------------VIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEK  212 (347)
T ss_dssp             -----------------------------EEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEEEE
T ss_pred             -----------------------------EEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCceEE
Confidence                                         2123333 3 7889999987755555443      2 34555444554433


Q ss_pred             EEECCeeeEEEEECCCCCEEEEeeCC--------CcEEEEcCCCCCcceEEEEeccccCcEEE-EEECCCCCCEEEEeeC
Q psy2107         311 EIVGNKSFFDVHYSPLSKLVITASAD--------KQIRLYDPKVKEGAIVKSTFSSHKEWVQS-VRWSPIDPQLFVSASF  381 (391)
Q Consensus       311 ~~~~~~~i~~~~~~p~~~~l~~g~~d--------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~l~s~~~  381 (391)
                      .... ..+..  ++|+|++|+.++.+        ..|++||  .++   ......+|...+.. +.|+ ++  ++++++.
T Consensus       213 l~~~-~~~~~--~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~  281 (347)
T 2gop_A          213 MFEK-VSFYA--VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIKD-GK--VYFTLFE  281 (347)
T ss_dssp             EEEE-ESEEE--EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEET-TE--EEEEEEE
T ss_pred             eccC-cceee--ECCCCCEEEEEEccccCCccccceEEEEC--CCc---eEeccccCCcccCCccEEc-Cc--EEEEEec
Confidence            3333 33433  39999988877644        4688888  333   34445566778886 9998 44  8899999


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      ++.++|| +
T Consensus       282 ~~~~~l~-~  289 (347)
T 2gop_A          282 EGSVNLY-I  289 (347)
T ss_dssp             TTEEEEE-E
T ss_pred             CCcEEEE-E
Confidence            9999999 6

>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A

Probab=99.66  E-value=5e-13  Score=115.84  Aligned_cols=229  Identities=7%  Similarity=0.032  Sum_probs=149.3

Q ss_pred             CCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEe
Q psy2107         114 LHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWE  186 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd  186 (391)
                      .+...+.+++|+  +++++++..++.|.+||..+.....+. .+...+.++++   ++++.++++...+    +.|.+||
T Consensus        42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~---~~dg~l~v~~~~~~~~~~~i~~~d  118 (333)
T 2dg1_A           42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKI---HKDGRLFVCYLGDFKSTGGIFAAT  118 (333)
T ss_dssp             SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEE---CTTSCEEEEECTTSSSCCEEEEEC
T ss_pred             ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEE---CCCCcEEEEeCCCCCCCceEEEEe
Confidence            455677889997  567778888999999999655444433 56678999999   7788877777666    6899998


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      ..  ......+.....+...+..++++|+++++++...      .+.|..+|.++++                       
T Consensus       119 ~~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~-----------------------  173 (333)
T 2dg1_A          119 EN--GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT-----------------------  173 (333)
T ss_dssp             TT--SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC-----------------------
T ss_pred             CC--CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE-----------------------
Confidence            44  3332211111123457899999999987776653      2445555543211                       


Q ss_pred             cCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEeccc-CceeEEE--------ECCeeeEEEEECCCCCE
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAEL-GGMKSEI--------VGNKSFFDVHYSPLSKL  329 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~-~~~~~~~--------~~~~~i~~~~~~p~~~~  329 (391)
                             ...+..+...+..++|++++. ++.+ +.++.|.+||+.+ +.....+        ..+..+..++++++|++
T Consensus       174 -------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l  246 (333)
T 2dg1_A          174 -------VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNL  246 (333)
T ss_dssp             -------EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCE
T ss_pred             -------EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCE
Confidence                   112222234467899997764 5444 5678999999964 3332211        12236778999999998


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEecccc------CcEEEEEECCCCCCEEEEeeC
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHK------EWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~------~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      +++...++.|.+||.. ++   ....+..+.      ..+.+++|+|+++.+++++..
T Consensus       247 ~v~~~~~~~v~~~d~~-g~---~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~  300 (333)
T 2dg1_A          247 YVAMYGQGRVLVFNKR-GY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND  300 (333)
T ss_dssp             EEEEETTTEEEEECTT-SC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCCEEEEECCC-CC---EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence            8887778999999974 33   333333332      268999999955455555544

>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A

Probab=99.65  E-value=9.9e-15  Score=138.78  Aligned_cols=258  Identities=10%  Similarity=-0.007  Sum_probs=164.6

Q ss_pred             cceEEEEEEeccCCCCCCcccCCCCcEE---------EEEec----CCE-EEEEEC-CCeEEEEcCC--C-ceEEeccC-
Q psy2107          93 ENVIDVEYLESTPTPSPLDCILHDDWVS---------AIDFH----NDW-ILTGCY-DHSVHIWTRR--G-EHKLNIPG-  153 (391)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~h~~~V~---------~~~~~----~~~-l~t~~~-dg~i~iwd~~--~-~~~~~~~~-  153 (391)
                      ++...+|....  ......+..|...+.         ...++    ++. |+.++. +..|.+|++.  + .....+.. 
T Consensus        46 ~~~~~l~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~  123 (662)
T 3azo_A           46 AGRATLVRRRA--DGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPV  123 (662)
T ss_dssp             TTEEEEEEECT--TSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCC
T ss_pred             CCcEEEEEECC--CCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCC
Confidence            44567776522  222344455555544         44333    666 665554 5678888877  4 55566665 


Q ss_pred             ----CCCCeeEEEEEecCCCCeEEEEEeCC----------CcEEEEeecCCC----CceeEEEEEe-cCCCCeEEEEEcC
Q psy2107         154 ----HGGPVKGVAWLYNDGKDAAFISVSTD----------QTAMIWEWKVES----NSIECIHVCR-GHERGLETVTVSE  214 (391)
Q Consensus       154 ----~~~~v~~l~~~~~~~~~~~l~s~~~d----------g~v~iwd~~~~~----~~~~~~~~~~-~~~~~v~~l~~~~  214 (391)
                          |...+.+++|   +++++.|++++.+          ..|++||+....    ...   ..+. .+...+..++|+|
T Consensus       124 ~~~~~~~~~~~~~~---spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~l~~~~~~~~~~~~~Sp  197 (662)
T 3azo_A          124 SAVGGGLRWADPVL---LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV---RELSDDAHRFVTGPRLSP  197 (662)
T ss_dssp             CCSTTCEEEEEEEE---ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS---EESSCSCSSEECCCEECT
T ss_pred             ccCCCCccccCcEE---CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce---eEEEecCCCcccCceECC
Confidence                6778899999   6688889888876          578888854210    222   2333 4556788899999


Q ss_pred             CCCEEEEEeCCC--------cEEEEECC-CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         215 SRQQFATGGWDC--------LLKIWSAD-ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       215 ~~~~l~sg~~dg--------~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      +|++|+.++.++        .|.+||+. ++..                          ........+|...+..+.|+|
T Consensus       198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~--------------------------~~~~~l~~~~~~~~~~~~~sp  251 (662)
T 3azo_A          198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF--------------------------ADTRTLLGGPEEAIAQAEWAP  251 (662)
T ss_dssp             TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE--------------------------EEEEEEEEETTBCEEEEEECT
T ss_pred             CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc--------------------------cccEEeCCCCCceEcceEECC
Confidence            999999887553        79999997 3310                          012223334567889999997


Q ss_pred             CCe-EEEEECCC--eEEEEecccCceeEEEECCee---------eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107         286 VDE-IITSSWDH--TLKIWDAELGGMKSEIVGNKS---------FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       286 ~~~-l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~---------i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~  353 (391)
                      ++. ++++..++  .|.+||+.+++.......+..         +..++|+|+++++++++. +.++||.+....+  ..
T Consensus       252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~--~~  328 (662)
T 3azo_A          252 DGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESG--EL  328 (662)
T ss_dssp             TSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTT--EE
T ss_pred             CCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCC--cE
Confidence            665 55566677  677777766665433333222         457889999999999988 9999994432211  24


Q ss_pred             EEeccccCcEEEE-EECCCCCCEEEEeeCCCcEEEE
Q psy2107         354 STFSSHKEWVQSV-RWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       354 ~~~~~h~~~v~~~-~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ..+..|...+..+ ++++ +..++++++.+....+|
T Consensus       329 ~~l~~~~~~~~~~~s~~~-~~~~~~~~~~~~~~~i~  363 (662)
T 3azo_A          329 VDAAGPWTEWAATLTVSG-TRAVGVAASPRTAYEVV  363 (662)
T ss_dssp             EECCSSCCEEEEEEEEET-TEEEEEEEETTEEEEEE
T ss_pred             EEecCCCCeEEEEEecCC-CEEEEEEcCCCCCCEEE
Confidence            5667777778877 5544 33345555656544444

>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}

Probab=99.64  E-value=4.2e-14  Score=125.35  Aligned_cols=210  Identities=10%  Similarity=0.045  Sum_probs=141.3

Q ss_pred             cC-CCceEEeccCCCCCeeE-----EEEEecCCCCeEEEEEeC-CCc--EEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         142 TR-RGEHKLNIPGHGGPVKG-----VAWLYNDGKDAAFISVST-DQT--AMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       142 d~-~~~~~~~~~~~~~~v~~-----l~~~~~~~~~~~l~s~~~-dg~--v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      +. ++.....+..|......     .+|   +|+++.|+.++. +|.  |.+||  ..+.  .......++...+..++|
T Consensus        16 ~~~~g~~~~~lt~~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~g~~~l~~~d--~~~g--~~~~lt~~~~~~~~~~~~   88 (388)
T 3pe7_A           16 DASTGAQVTRLTPPDVTCHRNYFYQKCF---TRDGSKLLFGGAFDGPWNYYLLD--LNTQ--VATQLTEGRGDNTFGGFL   88 (388)
T ss_dssp             CTTTCCEEEECSCTTSCEECCCTTSCCB---CTTSCEEEEEECTTSSCEEEEEE--TTTC--EEEECCCSSCBCSSSCEE
T ss_pred             cCCCCcceEEecCCcccccchhhcCccC---CCCCCEEEEEEcCCCCceEEEEe--CCCC--ceEEeeeCCCCCccceEE
Confidence            44 66777788777766665     788   788998888887 775  55555  3333  344444555555557789


Q ss_pred             cCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe--ccCCeEE
Q psy2107         213 SESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW--TAVDEII  290 (391)
Q Consensus       213 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~l~  290 (391)
                      +|+++.|+.++.++.|++||+.+++.                             ......+...+....|  ++++.++
T Consensus        89 spdg~~l~~~~~~~~l~~~d~~~g~~-----------------------------~~~~~~~~~~~~~~~~~~~~dg~~l  139 (388)
T 3pe7_A           89 SPDDDALFYVKDGRNLMRVDLATLEE-----------------------------NVVYQVPAEWVGYGTWVANSDCTKL  139 (388)
T ss_dssp             CTTSSEEEEEETTTEEEEEETTTCCE-----------------------------EEEEECCTTEEEEEEEEECTTSSEE
T ss_pred             cCCCCEEEEEeCCCeEEEEECCCCcc-----------------------------eeeeechhhcccccceeECCCCCee
Confidence            99999999999999999999987442                             2223333443433333  5555544


Q ss_pred             EE-----------------------ECCCeEEEEecccCceeEEEECCeeeEEEEECC-CCCEEEEeeCC------CcEE
Q psy2107         291 TS-----------------------SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP-LSKLVITASAD------KQIR  340 (391)
Q Consensus       291 s~-----------------------~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p-~~~~l~~g~~d------g~i~  340 (391)
                      .+                       ..+..|.+||+.+++..........+..++|+| +|+.|+....+      ..|.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~  219 (388)
T 3pe7_A          140 VGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMW  219 (388)
T ss_dssp             EEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEE
T ss_pred             ccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEE
Confidence            32                       234789999999988766666666788999999 99988877653      3788


Q ss_pred             EEcCCCCCcceEEEEecccc--CcEEEEEECCCCCCEEEEeeCCC----cEEEEecC
Q psy2107         341 LYDPKVKEGAIVKSTFSSHK--EWVQSVRWSPIDPQLFVSASFDN----SVKLWDLR  391 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~l~s~~~dg----~v~iwdlr  391 (391)
                      ++|+....   . ..+..+.  ..+...+|+|++..+++.+..++    .|++||+.
T Consensus       220 ~~d~~~~~---~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~  272 (388)
T 3pe7_A          220 LINEDGTN---M-RKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE  272 (388)
T ss_dssp             EEETTSCC---C-EESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred             EEeCCCCc---e-EEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence            88876543   2 2333343  35888999996655544443332    39999873

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.62  E-value=4e-13  Score=116.07  Aligned_cols=231  Identities=10%  Similarity=0.008  Sum_probs=157.2

Q ss_pred             CcEEEEEecCC-EEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         117 DWVSAIDFHND-WILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       117 ~~V~~~~~~~~-~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .....+.+.++ ++++...++.|.+||.. ++.+.++. .......+++.+   ++..+++...++.|.+||..  +  .
T Consensus        44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~---~g~lyv~~~~~~~v~~iD~~--t--~  115 (328)
T 3dsm_A           44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLS---DEKAYVTQIWDYRIFIINPK--T--Y  115 (328)
T ss_dssp             SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEE---TTEEEEEEBSCSEEEEEETT--T--T
T ss_pred             ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeC---CCeEEEEECCCCeEEEEECC--C--C
Confidence            34567777765 45555567999999994 55556664 456788899844   56555555589999999954  2  3


Q ss_pred             eEEEEEecCC-----CCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         195 ECIHVCRGHE-----RGLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       195 ~~~~~~~~~~-----~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                      +....+....     .....+++ .++ .++++.  .++.|.++|..+++.                             
T Consensus       116 ~~~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~-----------------------------  164 (328)
T 3dsm_A          116 EITGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKV-----------------------------  164 (328)
T ss_dssp             EEEEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEE-----------------------------
T ss_pred             eEEEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeE-----------------------------
Confidence            3444444322     14556777 344 454444  488999999977432                             


Q ss_pred             eeeecCccCcccEEEeccCCeEEEEECC-----------CeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEee
Q psy2107         268 LITLKGHKEAISAVQWTAVDEIITSSWD-----------HTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       268 ~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----------g~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~  334 (391)
                      ...+.. ......+.+++++.++.++..           +.|.++|..+++....+...  .....++++|+++.|.++.
T Consensus       165 ~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~  243 (328)
T 3dsm_A          165 VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN  243 (328)
T ss_dssp             EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES
T ss_pred             EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc
Confidence            233332 223467888887876666543           68999999999888777653  3688999999999888775


Q ss_pred             CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe----eCCCcEEEEec
Q psy2107         335 ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA----SFDNSVKLWDL  390 (391)
Q Consensus       335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~v~iwdl  390 (391)
                      .  .|.+||+.+++... ...+..+......++++|+++.++++.    ..++.|.+||.
T Consensus       244 ~--~v~~~d~~t~~~~~-~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~  300 (328)
T 3dsm_A          244 N--DIWRMPVEADRVPV-RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP  300 (328)
T ss_dssp             S--SEEEEETTCSSCCS-SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred             c--EEEEEECCCCceee-eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence            4  89999987655210 011122245789999999788888887    67899999986

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.62  E-value=2.6e-14  Score=125.17  Aligned_cols=241  Identities=10%  Similarity=0.026  Sum_probs=145.7

Q ss_pred             CCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC----------CCcEEEEeecCCCCceeEEEEEec
Q psy2107         134 YDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST----------DQTAMIWEWKVESNSIECIHVCRG  202 (391)
Q Consensus       134 ~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~  202 (391)
                      .|+.|.+||. +++.+..+..+..+  .++|   ++++++++++..          ++.|.+||..    ..+.+..+..
T Consensus        29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~---spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~----t~~~~~~i~~   99 (361)
T 2oiz_A           29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQV---SNDGKKIYTMTTYHERITRGKRSDVVEVWDAD----KLTFEKEISL   99 (361)
T ss_dssp             GGCEEEEEETTTCCEEEEEECCEEE--EEEE---CTTSSEEEEEEEEETTSSSSCEEEEEEEEETT----TCCEEEEEEE
T ss_pred             ccCeEEEEECCCCeEEEEecCCCCC--ceEE---CCCCCEEEEEEecccccccCCCCCEEEEEECc----CCcEEEEEEc
Confidence            4789999998 55666666665555  8899   788998888763          6789999953    3344444432


Q ss_pred             ------CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCC-CCCCCC------CC-----c-ccccccccccc
Q psy2107         203 ------HERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGD-PSENGD------EG-----T-TSKKRKKEYSS  261 (391)
Q Consensus       203 ------~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~~~~------~~-----~-~~~~~~~~~~~  261 (391)
                            +......++++|+|++|+++..  ++.|.+||+.+.+.... ......      +.     . ........+..
T Consensus       100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~  179 (361)
T 2oiz_A          100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTIN  179 (361)
T ss_dssp             CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEE
T ss_pred             CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEE
Confidence                  2245678999999999998864  58999999988765432 111000      00     0 00000000000


Q ss_pred             C-CCCCce------eeecCccCcccEEEecc-CCeEEEEECCCeEEEEecccCcee--EEEECC-----------eeeEE
Q psy2107         262 A-SSRTPL------ITLKGHKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMK--SEIVGN-----------KSFFD  320 (391)
Q Consensus       262 ~-~~~~~~------~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~-----------~~i~~  320 (391)
                      . ...+..      ..+..+..++ .+.+.+ +..++..+.++.+.++|+......  ..+...           .....
T Consensus       180 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~  258 (361)
T 2oiz_A          180 LGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL  258 (361)
T ss_dssp             ECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred             ECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence            0 001111      0111111111 111122 235666678899999998755422  222211           11123


Q ss_pred             EEECCCCCEEEEeeC-----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         321 VHYSPLSKLVITASA-----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       321 ~~~~p~~~~l~~g~~-----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++++|+++.++++..           .+.|.+||+.+.+   .+..+..+.  +.+++|+|++ ++|++++. +.|.+||
T Consensus       259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~---~v~~i~~~~--p~~ia~spdg-~~l~v~n~-~~v~v~D  331 (361)
T 2oiz_A          259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ---RVARIPGRD--ALSMTIDQQR-NLMLTLDG-GNVNVYD  331 (361)
T ss_dssp             EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE---EEEEEECTT--CCEEEEETTT-TEEEEECS-SCEEEEE
T ss_pred             EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc---EEEEEecCC--eeEEEECCCC-CEEEEeCC-CeEEEEE
Confidence            789999887776543           3489999998766   777777776  9999999954 56777766 9999999


Q ss_pred             cC
Q psy2107         390 LR  391 (391)
Q Consensus       390 lr  391 (391)
                      ++
T Consensus       332 ~~  333 (361)
T 2oiz_A          332 IS  333 (361)
T ss_dssp             CS
T ss_pred             CC
Confidence            73

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.61  E-value=3.8e-14  Score=135.27  Aligned_cols=239  Identities=8%  Similarity=-0.087  Sum_probs=155.9

Q ss_pred             CCCCcEEEEEec--CCEEE-----EEECCCeEEEEcCCCceEEeccCCCCCe--eEEEEEecCCCCeEEEEEeCCCc---
Q psy2107         114 LHDDWVSAIDFH--NDWIL-----TGCYDHSVHIWTRRGEHKLNIPGHGGPV--KGVAWLYNDGKDAAFISVSTDQT---  181 (391)
Q Consensus       114 ~h~~~V~~~~~~--~~~l~-----t~~~dg~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~l~s~~~dg~---  181 (391)
                      +|...+.+++|+  |++||     .|+.+..|++||+.+..... ..+...+  ..++|   +++++.|+.++.|..   
T Consensus       118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~w---spDg~~l~~~~~d~~~~~  193 (695)
T 2bkl_A          118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKW---TPDSKGFYYEWLPTDPSI  193 (695)
T ss_dssp             SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEE---CTTSSEEEEEECCCCTTS
T ss_pred             CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEE---ecCCCEEEEEEecCCCCC
Confidence            466678899998  56777     33344689999996544331 1122222  68999   788999999988776   


Q ss_pred             ----------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEECCCCCCCCCCCCCCC
Q psy2107         182 ----------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----LLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       182 ----------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~  247 (391)
                                |++|++.........+.....|...+..+.|+|+|++|+.++.++    .|.+|+..++           
T Consensus       194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~-----------  262 (695)
T 2bkl_A          194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK-----------  262 (695)
T ss_dssp             CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS-----------
T ss_pred             ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC-----------
Confidence                      999996533322334444445666889999999999998877665    5666654321           


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC----CCeEEEEecccCce---eEEEECC--eee
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW----DHTLKIWDAELGGM---KSEIVGN--KSF  318 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~----dg~i~iwd~~~~~~---~~~~~~~--~~i  318 (391)
                                         ....+..+...+....+++++ ++..+.    ++.|.+||+.++..   ...+..+  ..+
T Consensus       263 -------------------~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l  322 (695)
T 2bkl_A          263 -------------------DFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL  322 (695)
T ss_dssp             -------------------SCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred             -------------------ceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence                               233344455555666666555 555543    58899999987753   3333332  357


Q ss_pred             EEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCCCEEEEee---CCCcEEEEec
Q psy2107         319 FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDL  390 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwdl  390 (391)
                      ..++++ ++.++++...|+..+||.+... +. ....+..+ .+.|..++++|++..++++.+   ..++|++||+
T Consensus       323 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~-g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~  395 (695)
T 2bkl_A          323 LSVSIV-GGHLSLEYLKDATSEVRVATLK-GK-PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSV  395 (695)
T ss_dssp             EEEEEE-TTEEEEEEEETTEEEEEEEETT-CC-EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEET
T ss_pred             EEEEEE-CCEEEEEEEECCEEEEEEEeCC-CC-eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence            778888 6778888888998888765421 11 33444444 667888999995555544443   3468999986

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.59  E-value=7.1e-13  Score=113.81  Aligned_cols=232  Identities=13%  Similarity=0.161  Sum_probs=149.4

Q ss_pred             cEEEEEec--CCEEEE-------EECCCeEEEEcCCCceEEeccC-----CCCCeeEEEEEecCCC-CeEEEEEeCCCcE
Q psy2107         118 WVSAIDFH--NDWILT-------GCYDHSVHIWTRRGEHKLNIPG-----HGGPVKGVAWLYNDGK-DAAFISVSTDQTA  182 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t-------~~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v  182 (391)
                      ...+++|+  +.++++       +..++.|.+||........+..     +...+.++++   +++ +.++++.. .+.|
T Consensus        19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~---~~~~g~l~v~~~-~~~l   94 (314)
T 1pjx_A           19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQC---DRDANQLFVADM-RLGL   94 (314)
T ss_dssp             TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEE---CSSSSEEEEEET-TTEE
T ss_pred             CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEE---ecCCCcEEEEEC-CCCE
Confidence            45678886  556666       5778999999975444443322     4567889998   667 66555444 4478


Q ss_pred             EEEeecCCCCceeEE-EEEe--cCCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEECCCCCCCCCCCC
Q psy2107         183 MIWEWKVESNSIECI-HVCR--GHERGLETVTVSESRQQFATGGWD---------------CLLKIWSADISKERGDPSE  244 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~-~~~~--~~~~~v~~l~~~~~~~~l~sg~~d---------------g~i~iwd~~~~~~~~~~~~  244 (391)
                      .+||..   .....+ ....  .....+.+++++++++++++...+               +.|..|+.. ++       
T Consensus        95 ~~~d~~---g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-------  163 (314)
T 1pjx_A           95 LVVQTD---GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-------  163 (314)
T ss_dssp             EEEETT---SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC-------
T ss_pred             EEEeCC---CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC-------
Confidence            888843   222111 1000  112358899999999877776554               455555543 11       


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCcccEEEec----cCC-eEEEE-ECCCeEEEEecc-cCce-----eEEE
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT----AVD-EIITS-SWDHTLKIWDAE-LGGM-----KSEI  312 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~s~-~~dg~i~iwd~~-~~~~-----~~~~  312 (391)
                                             ...+..+......++++    +++ .++.+ ..++.|.+||+. +++.     ...+
T Consensus       164 -----------------------~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~  220 (314)
T 1pjx_A          164 -----------------------MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI  220 (314)
T ss_dssp             -----------------------EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC
T ss_pred             -----------------------EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC
Confidence                                   11122223345678888    877 45555 467899999986 4432     1222


Q ss_pred             ECC--eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         313 VGN--KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       313 ~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..+  ..+..++++++|+++++...++.|.+||..+++   ....+..+...+.+++|+|++..++++...++.|..|++
T Consensus       221 ~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~---~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~  297 (314)
T 1pjx_A          221 PGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ---PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             CCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS---CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             CCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc---EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence            222  457789999999988887788999999987544   333444566789999999954436667777789999886

>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...

Probab=99.59  E-value=4.9e-14  Score=135.52  Aligned_cols=195  Identities=9%  Similarity=0.095  Sum_probs=132.4

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC-----eEEEEEcCCCCEEEEEeCC-----
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG-----LETVTVSESRQQFATGGWD-----  225 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~-----v~~l~~~~~~~~l~sg~~d-----  225 (391)
                      ....+++|   ++++.+++++  ||+|++||+.  ++  .+...+.+|...     ...++|+|||++|+.++.+     
T Consensus        17 ~~~~~~~w---~~dg~~~~~~--~~~i~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r   87 (740)
T 4a5s_A           17 LKLYSLRW---ISDHEYLYKQ--ENNILVFNAE--YG--NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR   87 (740)
T ss_dssp             CCCCCEEE---CSSSEEEEEE--TTEEEEEETT--TC--CEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred             ccccccEE---CCCCcEEEEc--CCcEEEEECC--CC--ceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEE
Confidence            34668999   7788888886  9999999954  32  334456666532     2448899999999998876     


Q ss_pred             ----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEE
Q psy2107         226 ----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIW  301 (391)
Q Consensus       226 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iw  301 (391)
                          +.+.+||+.+++.                              ..+..|...+...+|+|++..++-..++.|++|
T Consensus        88 ~~~~~~~~~~d~~~~~~------------------------------~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~  137 (740)
T 4a5s_A           88 HSYTASYDIYDLNKRQL------------------------------ITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVK  137 (740)
T ss_dssp             SCEEEEEEEEETTTTEE------------------------------CCSSCCCTTEEEEEECSSTTCEEEEETTEEEEE
T ss_pred             EccceEEEEEECCCCcE------------------------------EEcccCCCcceeeEECCCCCEEEEEECCeEEEE
Confidence                5667999987442                              224456678899999988764444468999999


Q ss_pred             ecccCceeEEEECCe--ee-----------------EEEEECCCCCEEEEeeCCC-------------------------
Q psy2107         302 DAELGGMKSEIVGNK--SF-----------------FDVHYSPLSKLVITASADK-------------------------  337 (391)
Q Consensus       302 d~~~~~~~~~~~~~~--~i-----------------~~~~~~p~~~~l~~g~~dg-------------------------  337 (391)
                      |+.++...+......  .+                 ..+.|||||++||.++.|.                         
T Consensus       138 ~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~  217 (740)
T 4a5s_A          138 IEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVP  217 (740)
T ss_dssp             SSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEE
T ss_pred             ECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeec
Confidence            998877543221111  11                 2488999999999875332                         


Q ss_pred             -----------cEEEEcCCC---CCcceEEEEec-----cccCcEEEEEECCCCCCEEEEeeC----CCcEEEEec
Q psy2107         338 -----------QIRLYDPKV---KEGAIVKSTFS-----SHKEWVQSVRWSPIDPQLFVSASF----DNSVKLWDL  390 (391)
Q Consensus       338 -----------~i~iwd~~~---~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~----dg~v~iwdl  390 (391)
                                 .|++||+.+   ++.........     +|...+..++|+|+ +++++....    +..|++||+
T Consensus       218 yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspd-g~~~~~~~~r~~~~~~i~~~d~  292 (740)
T 4a5s_A          218 YPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQ-ERISLQWLRRIQNYSVMDICDY  292 (740)
T ss_dssp             CCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEET-TEEEEEEEESSTTEEEEEEEEE
T ss_pred             CCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCC-CeEEEEEeCCCCCEEEEEEEEC
Confidence                       478888876   52111222211     37788999999995 555554432    346999985

>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1

Probab=99.58  E-value=4e-12  Score=107.62  Aligned_cols=193  Identities=16%  Similarity=0.200  Sum_probs=138.0

Q ss_pred             CCCCcEEEEEe-c-CCEEEEEE-C-CCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeec
Q psy2107         114 LHDDWVSAIDF-H-NDWILTGC-Y-DHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       114 ~h~~~V~~~~~-~-~~~l~t~~-~-dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~  188 (391)
                      +|...+.++++ . ...++.+. . ++.|++||.++..+..+. .+...+.++++   ++++.++++...++.|.+|+..
T Consensus        74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~  150 (286)
T 1q7f_A           74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTV---DNKGRIIVVECKVMRVIIFDQN  150 (286)
T ss_dssp             TCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEE---CTTSCEEEEETTTTEEEEECTT
T ss_pred             ccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCceEEEE---eCCCCEEEEECCCCEEEEEcCC
Confidence            35567889999 3 33444444 3 899999998777766554 34467889999   7788888888888999999832


Q ss_pred             CCCCceeEEEEEe--cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         189 VESNSIECIHVCR--GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       189 ~~~~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                        .   ..+..+.  .+...+..++++++++++++...++.|++||...                              .
T Consensus       151 --g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g------------------------------~  195 (286)
T 1q7f_A          151 --G---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG------------------------------Q  195 (286)
T ss_dssp             --S---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC------------------------------C
T ss_pred             --C---CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC------------------------------C
Confidence              2   2333443  3456789999999999888878889999999743                              1


Q ss_pred             ceeeecC--ccCcccEEEeccCCeEEEEE-CCC-eEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcE
Q psy2107         267 PLITLKG--HKEAISAVQWTAVDEIITSS-WDH-TLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       267 ~~~~~~~--~~~~v~~~~~~~~~~l~s~~-~dg-~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                      .+..+..  +...+..+++++++.++.+. .++ .|.+||. +++.+..+..+.   .+.+++++|+|+++++ +.++.|
T Consensus       196 ~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v  273 (286)
T 1q7f_A          196 YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRL  273 (286)
T ss_dssp             EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEE
T ss_pred             EEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeE
Confidence            2223322  23567889999777655554 454 9999995 566666665433   3678999999987777 579999


Q ss_pred             EEEcCCC
Q psy2107         340 RLYDPKV  346 (391)
Q Consensus       340 ~iwd~~~  346 (391)
                      ++|++..
T Consensus       274 ~v~~~~~  280 (286)
T 1q7f_A          274 YIYRYVQ  280 (286)
T ss_dssp             EEEECSC
T ss_pred             EEEEccc
Confidence            9999754

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.58  E-value=2.7e-11  Score=103.02  Aligned_cols=234  Identities=9%  Similarity=-0.022  Sum_probs=160.7

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEec--cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNI--PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~--~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      +...+.+++++  +.++++...++.|.+||..+ ....+  ..+...+.++++   ++++.++++...++.|..|+..  
T Consensus        13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~-~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~--   86 (299)
T 2z2n_A           13 QDTGPYGITVSDKGKVWITQHKANMISCINLDG-KITEYPLPTPDAKVMCLTI---SSDGEVWFTENAANKIGRITKK--   86 (299)
T ss_dssp             SSCCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECTT--
T ss_pred             cCCCccceEECCCCCEEEEecCCCcEEEEcCCC-CeEEecCCcccCceeeEEE---CCCCCEEEeCCCCCeEEEECCC--
Confidence            44578899987  55666555578999999873 33332  335577889999   7788888877778889999843  


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                       .... ...+......+.++++.++++++++...++.|..||. +++.                            ....
T Consensus        87 -g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~----------------------------~~~~  135 (299)
T 2z2n_A           87 -GIIK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI----------------------------REYE  135 (299)
T ss_dssp             -SCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE----------------------------EEEE
T ss_pred             -CcEE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE----------------------------EEec
Confidence             2221 1222234567899999999988887777889999987 3221                            1111


Q ss_pred             ecCccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEE-E-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         271 LKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEI-V-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~-~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      ...+...+..+++.+++.++.+. .++.|..||. +++..... . ....+..++++++|++.++...++.|.+||. ++
T Consensus       136 ~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g  213 (299)
T 2z2n_A          136 LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG  213 (299)
T ss_dssp             CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred             CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence            22234567889999777766655 4689999998 66654321 1 1236788999999997777767889999998 44


Q ss_pred             CcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       348 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .  ........+...+.++++++ ++.++++...++.|.+||.
T Consensus       214 ~--~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~  253 (299)
T 2z2n_A          214 E--ITEFKIPTPNARPHAITAGA-GIDLWFTEWGANKIGRLTS  253 (299)
T ss_dssp             C--EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEEET
T ss_pred             c--EEEEECCCCCCCceeEEECC-CCCEEEeccCCceEEEECC
Confidence            3  12222344556799999999 5566776657788998874

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.57  E-value=3.8e-14  Score=125.90  Aligned_cols=225  Identities=10%  Similarity=0.011  Sum_probs=137.8

Q ss_pred             EEec--CCEEEEEECCCeEEEEcCCCceEEec-cCCCCCeeE-------------------EEEEecCCCCeEEEEE---
Q psy2107         122 IDFH--NDWILTGCYDHSVHIWTRRGEHKLNI-PGHGGPVKG-------------------VAWLYNDGKDAAFISV---  176 (391)
Q Consensus       122 ~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~-------------------l~~~~~~~~~~~l~s~---  176 (391)
                      +.|+  ++.|+.++.++.|++||+.+.....+ ..+......                   +.|   +++++.++.+   
T Consensus        86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~---spdg~~~~~~~~~  162 (396)
T 3c5m_A           86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDW---QPLTSWEKFAEFY  162 (396)
T ss_dssp             CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGC---CCCCSHHHHHHHH
T ss_pred             ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCcccccccccccc---CCCCcceeeeeec
Confidence            4565  77999999999999999965443333 223332111                   122   3444444333   


Q ss_pred             --eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCC
Q psy2107         177 --STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWD------CLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       177 --~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~  247 (391)
                        ..+..|.+||+.  ......+   ..+...+..+.|+| +++.|+..+.+      ..|.+||+..+..         
T Consensus       163 ~~~~~~~l~~~d~~--~g~~~~~---~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---------  228 (396)
T 3c5m_A          163 HTNPTCRLIKVDIE--TGELEVI---HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---------  228 (396)
T ss_dssp             HTCCCEEEEEEETT--TCCEEEE---EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---------
T ss_pred             cCCCcceEEEEECC--CCcEEee---ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---------
Confidence              345678888854  3332222   24567889999999 78877766543      3578888754221         


Q ss_pred             CCccccccccccccCCCCCceeeecCc--cCcccEEEeccCCe-EEEEECC-----CeEEEEecccCceeEEEECCeeeE
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGH--KEAISAVQWTAVDE-IITSSWD-----HTLKIWDAELGGMKSEIVGNKSFF  319 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~-l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~i~  319 (391)
                                           ..+..+  ...+..+.|+|++. |+.++.+     +.|++||+.+++......... ..
T Consensus       229 ---------------------~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~  286 (396)
T 3c5m_A          229 ---------------------RKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS  286 (396)
T ss_dssp             ---------------------EESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE
T ss_pred             ---------------------eEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC
Confidence                                 112222  23467889997665 6666544     459999999887654433332 23


Q ss_pred             EEEECC-CCCEEEEee----------------CCCcEEEEcCCCCCcceEEEEeccccC-----------cEEEEEECCC
Q psy2107         320 DVHYSP-LSKLVITAS----------------ADKQIRLYDPKVKEGAIVKSTFSSHKE-----------WVQSVRWSPI  371 (391)
Q Consensus       320 ~~~~~p-~~~~l~~g~----------------~dg~i~iwd~~~~~~~~~~~~~~~h~~-----------~v~~~~~~~~  371 (391)
                       +.|+| +|+++++++                .++.|++||+..+...    .+..+..           .+..++|+|+
T Consensus       287 -~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~s~d  361 (396)
T 3c5m_A          287 -HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ----KLCKHSTSWDVLDGDRQITHPHPSFTPN  361 (396)
T ss_dssp             -EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC----EEEECCCCCCCBTTBSSTTCCCCEECTT
T ss_pred             -CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE----EccCCCCccccccccccCCCCCceEccC
Confidence             88999 999888754                3478999998765522    2333433           2567889995


Q ss_pred             CCCEEEEeeCCCcEEEEec
Q psy2107         372 DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..+++++..++...||.+
T Consensus       362 g~~l~~~s~~~~~~~l~~~  380 (396)
T 3c5m_A          362 DDGVLFTSDFEGVPAIYIA  380 (396)
T ss_dssp             SSEEEEEECTTSSCEEEEE
T ss_pred             CCeEEEEecCCCCceEEEE
Confidence            5544444445677666643

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.57  E-value=9.9e-14  Score=120.57  Aligned_cols=177  Identities=9%  Similarity=0.032  Sum_probs=127.4

Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC-------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES-------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK  229 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~-------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~  229 (391)
                      ++..+++   ++...++++|+.++ +.+|++....       ...+..... .+.. |+.++|  ++++|+++ .++.|+
T Consensus        39 ~~nlLai---s~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~~L~v~-~~~~l~  109 (388)
T 1xip_A           39 SLQNLDI---SNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGDQVLVS-TRNALY  109 (388)
T ss_dssp             CCBCEEE---ETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETTEEEEE-ESSEEE
T ss_pred             cccEEEE---cCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCCEEEEE-cCCcEE
Confidence            6888999   56677899998875 5669854211       012221222 3556 999999  88999998 889999


Q ss_pred             EEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCcee
Q psy2107         230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK  309 (391)
Q Consensus       230 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~  309 (391)
                      +||+++..                             .......|...+.++.+.+.+ +++++.||.|.+||+.++...
T Consensus       110 v~dv~sl~-----------------------------~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~  159 (388)
T 1xip_A          110 SLDLEELS-----------------------------EFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTK  159 (388)
T ss_dssp             EEESSSTT-----------------------------CEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEE
T ss_pred             EEEchhhh-----------------------------ccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCccc
Confidence            99997622                             233445566778888777443 888999999999999988765


Q ss_pred             EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe------c---cccCcEEEEEECCCCCCEEEEe
Q psy2107         310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF------S---SHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       310 ~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~------~---~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      .   ....|.|++|+|+|  ++.|..||.+++|+....... ....+      .   +|...|.++.|.+ +..++++-
T Consensus       160 ~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~-~~~flv~y  231 (388)
T 1xip_A          160 Q---LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILS-PQDFLAVF  231 (388)
T ss_dssp             E---EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESS-SSEEEEEE
T ss_pred             c---ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEec-CCeEEEEE
Confidence            3   33589999999999  677889999999987654410 03334      2   4778999999999 55566653

>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}

Probab=99.57  E-value=7.2e-14  Score=124.07  Aligned_cols=229  Identities=10%  Similarity=0.008  Sum_probs=142.8

Q ss_pred             cEEEEEec--CCEEEEEECC---CeEEEEcCCCceEEeccCCCCCee-EEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         118 WVSAIDFH--NDWILTGCYD---HSVHIWTRRGEHKLNIPGHGGPVK-GVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~v~-~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      .+.+++|+  |++|+.....   ..|.+||+.+.....+..+..... .+.|   +++++.|+.++.++.|.+|++.  .
T Consensus        37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~---spdg~~l~~~~~~~~l~~~d~~--~  111 (396)
T 3c5m_A           37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFI---STDERAFFYVKNELNLMKVDLE--T  111 (396)
T ss_dssp             CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEE---CTTSSEEEEEETTTEEEEEETT--T
T ss_pred             eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceE---CCCCCEEEEEEcCCcEEEEECC--C
Confidence            35566776  6677766543   478888997766666655444433 4788   7889999999999999999954  3


Q ss_pred             CceeEEEEEecCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         192 NSIECIHVCRGHERGLET-------------------VTVSESRQQFATG-----GWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~-------------------l~~~~~~~~l~sg-----~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      ....  .....+......                   +.|+|+++.++.+     ..+..|.+||+.+++          
T Consensus       112 ~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~----------  179 (396)
T 3c5m_A          112 LEEQ--VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE----------  179 (396)
T ss_dssp             CCEE--EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC----------
T ss_pred             CCcE--EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc----------
Confidence            3322  223323332222                   2456666655443     345677888876532          


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEecc-CCe-EEEEECC------CeEEEEecccCceeEEEEC--Cee
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDE-IITSSWD------HTLKIWDAELGGMKSEIVG--NKS  317 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~-l~s~~~d------g~i~iwd~~~~~~~~~~~~--~~~  317 (391)
                                          ...+..+...+..+.|+| ++. ++..+.+      ..|.+||+..++.......  ...
T Consensus       180 --------------------~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~  239 (396)
T 3c5m_A          180 --------------------LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES  239 (396)
T ss_dssp             --------------------EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred             --------------------EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence                                122224566788899998 454 6655543      4688889876553322222  236


Q ss_pred             eEEEEECCCCCEEEEeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECC-CCCCEEEEee-----------
Q psy2107         318 FFDVHYSPLSKLVITASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP-IDPQLFVSAS-----------  380 (391)
Q Consensus       318 i~~~~~~p~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~l~s~~-----------  380 (391)
                      +..++|+|+|++|+.++.+     +.|++||+.+++.. .+....+    .. +.|+| ++. ++++++           
T Consensus       240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~----~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~  312 (396)
T 3c5m_A          240 CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE-EVMVMPP----CS-HLMSNFDGS-LMVGDGCDAPVDVADAD  312 (396)
T ss_dssp             EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE-EEEECCS----EE-EEEECSSSS-EEEEEECCC--------
T ss_pred             ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE-EeeeCCC----CC-CCccCCCCc-eEEEecCCcceeecccc
Confidence            7889999999987776543     44999999876522 1222222    33 88998 665 566544           


Q ss_pred             -----CCCcEEEEec
Q psy2107         381 -----FDNSVKLWDL  390 (391)
Q Consensus       381 -----~dg~v~iwdl  390 (391)
                           .++.|++||+
T Consensus       313 ~~~~~~~~~i~~~d~  327 (396)
T 3c5m_A          313 SYNIENDPFLYVLNT  327 (396)
T ss_dssp             --CCCCCCEEEEEET
T ss_pred             ccccCCCCcEEEEec
Confidence                 3478999986

>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...

Probab=99.55  E-value=9.2e-12  Score=108.93  Aligned_cols=239  Identities=13%  Similarity=0.036  Sum_probs=150.1

Q ss_pred             EEEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccC------CCCCeeEEEEEecCCCCeEEEEEeC--C
Q psy2107         121 AIDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPG------HGGPVKGVAWLYNDGKDAAFISVST--D  179 (391)
Q Consensus       121 ~~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~------~~~~v~~l~~~~~~~~~~~l~s~~~--d  179 (391)
                      .++|+  +++++++.          .++.|.+||.. .+.+..+..      +......+++   ++++++|+++..  +
T Consensus        54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~---spdg~~l~v~n~~~~  130 (361)
T 2oiz_A           54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQ---TTDGKFIVLQNASPA  130 (361)
T ss_dssp             EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEE---CTTSSEEEEEEESSS
T ss_pred             ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEE---CCCCCEEEEECCCCC
Confidence            67887  66787776          36789999984 455554432      2345678999   888998888764  6


Q ss_pred             CcEEEEeecCCCCceeEEEE-EecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-CCCC------CCCCCCCCCCc
Q psy2107         180 QTAMIWEWKVESNSIECIHV-CRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADI-SKER------GDPSENGDEGT  250 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~-~~~~------~~~~~~~~~~~  250 (391)
                      ++|.+||+.    ..+.+.. +..  .....+.+.|++ ..+++.+.||.+.+|+... ++..      ...........
T Consensus       131 ~~v~v~d~~----~~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~  204 (361)
T 2oiz_A          131 TSIGIVDVA----KGDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIF  204 (361)
T ss_dssp             EEEEEEETT----TTEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBC
T ss_pred             CeEEEEECC----CCcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceE
Confidence            899999954    2244544 332  222335667765 6778888999999998864 2221      00000000000


Q ss_pred             --cccccccc----------cccCCCCC--ceeeecCc----------cCcccEEEeccC-CeEEEEEC-----------
Q psy2107         251 --TSKKRKKE----------YSSASSRT--PLITLKGH----------KEAISAVQWTAV-DEIITSSW-----------  294 (391)
Q Consensus       251 --~~~~~~~~----------~~~~~~~~--~~~~~~~~----------~~~v~~~~~~~~-~~l~s~~~-----------  294 (391)
                        ........          ..+.....  ....+...          ......++++++ ++++++..           
T Consensus       205 ~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~  284 (361)
T 2oiz_A          205 IAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP  284 (361)
T ss_dssp             SCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred             EEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence              00000000          00000000  00010000          011123678855 56665543           


Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC--CcceEEEEeccccCcEEEEEECCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK--EGAIVKSTFSSHKEWVQSVRWSPID  372 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~  372 (391)
                      .+.|.+||+.+++.+.++..+. +..++|+|+|++|++++. +.|.+||..++  +   .+..+..+......++++|++
T Consensus       285 ~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~---~~~~i~~~G~~P~~~~~~p~G  359 (361)
T 2oiz_A          285 AAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPK---LLRTIEGAAEASLQVQFHPVG  359 (361)
T ss_dssp             CSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCE---EEEEETTSCSSEEEEEECCCS
T ss_pred             CceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcce---eeEEeccCCCCcEEEEecCCC
Confidence            3589999999999999999888 999999999999998886 99999999876  5   666766677788999999955


Q ss_pred             C
Q psy2107         373 P  373 (391)
Q Consensus       373 ~  373 (391)
                      +
T Consensus       360 ~  360 (361)
T 2oiz_A          360 G  360 (361)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*

Probab=99.54  E-value=5.7e-12  Score=108.95  Aligned_cols=193  Identities=9%  Similarity=0.022  Sum_probs=140.8

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc--eEEec---------cCCCCCeeEEEEEecCC-CCeEEEEEe-CC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE--HKLNI---------PGHGGPVKGVAWLYNDG-KDAAFISVS-TD  179 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~--~~~~~---------~~~~~~v~~l~~~~~~~-~~~~l~s~~-~d  179 (391)
                      +-.....++++  ++++++...++.|++|+.++.  .+..+         ..+-.....+++   ++ ++.++++.+ .+
T Consensus        89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~---~~~~g~lyv~d~~~~  165 (329)
T 3fvz_A           89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAV---EPSTGAVFVSDGYCN  165 (329)
T ss_dssp             TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEE---CTTTCCEEEEECSSC
T ss_pred             ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEE---eCCCCeEEEEeCCCC
Confidence            44567888987  678888888999999999765  44444         244457889999   66 677888876 69


Q ss_pred             CcEEEEeecCCCCceeEEEEEec----------CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRG----------HERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~----------~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      +.|++|+.  .   ...+..+..          +......++++|+ +.++++...++.|++||.++++           
T Consensus       166 ~~I~~~~~--~---g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~-----------  229 (329)
T 3fvz_A          166 SRIVQFSP--S---GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE-----------  229 (329)
T ss_dssp             CEEEEECT--T---SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC-----------
T ss_pred             CeEEEEcC--C---CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc-----------
Confidence            99999982  2   233344422          2234889999998 7777777788999999997533           


Q ss_pred             CccccccccccccCCCCCceeee--cCccCcccEEEeccCCeEEEE--------ECCCeEEEEecccCceeEEEE----C
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITL--KGHKEAISAVQWTAVDEIITS--------SWDHTLKIWDAELGGMKSEIV----G  314 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~l~s~--------~~dg~i~iwd~~~~~~~~~~~----~  314 (391)
                                        .+..+  ..+...+..++++| +.++..        ..+..|++||..+++.+..+.    .
T Consensus       230 ------------------~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~  290 (329)
T 3fvz_A          230 ------------------FVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKH  290 (329)
T ss_dssp             ------------------EEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSC
T ss_pred             ------------------EEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCc
Confidence                              23333  23455677888888 443333        234589999999999988874    2


Q ss_pred             CeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         315 NKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       315 ~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ...+..++++|+|.++++...++.|++|++.
T Consensus       291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~  321 (329)
T 3fvz_A          291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTLT  321 (329)
T ss_dssp             CSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred             cCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence            2357899999999888888889999999964

>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}

Probab=99.53  E-value=7.6e-12  Score=108.03  Aligned_cols=212  Identities=8%  Similarity=0.068  Sum_probs=145.6

Q ss_pred             CCCeEEEEcCCCceEEe-cc------CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         134 YDHSVHIWTRRGEHKLN-IP------GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       134 ~dg~i~iwd~~~~~~~~-~~------~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                      .+++|.+||.....+.. +.      ........+.+   . .+.++++...++.|.+||..    +.+.+..+. ....
T Consensus        15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~---~-~~~lyv~~~~~~~v~viD~~----t~~~~~~i~-~~~~   85 (328)
T 3dsm_A           15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI---R-DGIGWIVVNNSHVIFAIDIN----TFKEVGRIT-GFTS   85 (328)
T ss_dssp             CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE---E-TTEEEEEEGGGTEEEEEETT----TCCEEEEEE-CCSS
T ss_pred             CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE---E-CCEEEEEEcCCCEEEEEECc----ccEEEEEcC-CCCC
Confidence            37899999996554442 21      12244667776   2 35566666778999999954    334555554 3467


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc-----CcccEE
Q psy2107         207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK-----EAISAV  281 (391)
Q Consensus       207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~  281 (391)
                      ...++++++++.+++...++.|.+||..+.+.                             ...+....     .....+
T Consensus        86 p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~-----------------------------~~~i~~g~~~~~~~~p~~i  136 (328)
T 3dsm_A           86 PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEI-----------------------------TGYIECPDMDMESGSTEQM  136 (328)
T ss_dssp             EEEEEEEETTEEEEEEBSCSEEEEEETTTTEE-----------------------------EEEEECTTCCTTTCBCCCE
T ss_pred             CcEEEEeCCCeEEEEECCCCeEEEEECCCCeE-----------------------------EEEEEcCCccccCCCcceE
Confidence            88999999885445544889999999976432                             22222111     144566


Q ss_pred             EeccCCeEEEEE--CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC----------CcEEEEcCCCCCc
Q psy2107         282 QWTAVDEIITSS--WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD----------KQIRLYDPKVKEG  349 (391)
Q Consensus       282 ~~~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d----------g~i~iwd~~~~~~  349 (391)
                      ++ .++.++.+.  .++.|.++|+.+++....+........++++|+|++++++..+          +.|.++|..+.+ 
T Consensus       137 ~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~-  214 (328)
T 3dsm_A          137 VQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT-  214 (328)
T ss_dssp             EE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE-
T ss_pred             EE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe-
Confidence            66 567766666  4899999999999998888876667789999999988777654          789999987655 


Q ss_pred             ceEEEEeccc-cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         350 AIVKSTFSSH-KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 ~~~~~~~~~h-~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        +...+... ...+..++|+|++.. |..+..  .|.+||+
T Consensus       215 --v~~~~~~~~g~~p~~la~~~d~~~-lyv~~~--~v~~~d~  251 (328)
T 3dsm_A          215 --VEKQFKFKLGDWPSEVQLNGTRDT-LYWINN--DIWRMPV  251 (328)
T ss_dssp             --EEEEEECCTTCCCEEEEECTTSCE-EEEESS--SEEEEET
T ss_pred             --EEEEEecCCCCCceeEEEecCCCE-EEEEcc--EEEEEEC
Confidence              44444321 236899999995554 444433  8889886

>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}

Probab=99.53  E-value=3.5e-12  Score=111.10  Aligned_cols=218  Identities=11%  Similarity=0.091  Sum_probs=139.4

Q ss_pred             CcEEEEEec--CCEEEEEECC---C--eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC----------
Q psy2107         117 DWVSAIDFH--NDWILTGCYD---H--SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD----------  179 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~d---g--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d----------  179 (391)
                      ..+.+++|+  |+.|+.++.+   +  .|.+|++.+.....+..+.. +..++|   +++++.|+.++.+          
T Consensus        59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~w---spdg~~l~~~~~~~~~~~~~~~~  134 (347)
T 2gop_A           59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEW---NEDSRKLLIVGFKRREDEDFIFE  134 (347)
T ss_dssp             ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEE---CTTSSEEEEEEECCCC-------
T ss_pred             ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeE---CCCCCEEEEEEccCCCcCCcEEE
Confidence            457788888  6678777654   3  47778886665555544445 999999   7788888877632          


Q ss_pred             -----------------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEECCC
Q psy2107         180 -----------------QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-------LLKIWSADI  235 (391)
Q Consensus       180 -----------------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-------~i~iwd~~~  235 (391)
                                       ..|.+||+.  .+..  +..+.. . .+..++|+|++ +++++..++       ...+|.+++
T Consensus       135 ~~~~~~~~g~~~~~~~~~~l~~~d~~--~~~~--~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~  207 (347)
T 2gop_A          135 DDVPAWFDDLGFFDGEKTTFWIFDTE--SEEV--IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED  207 (347)
T ss_dssp             --CCCC---------CEEEEEEEETT--TTEE--EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET
T ss_pred             cccceeecCcccccCccceEEEEECC--CCeE--EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCC
Confidence                             467777743  3332  122322 2 78899999999 777776542       345555432


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECC--------CeEEEEecccC
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWD--------HTLKIWDAELG  306 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~d--------g~i~iwd~~~~  306 (391)
                      ++                              ...+..+ ..+..+  +|++ .++.++.+        ..|.+||  ++
T Consensus       208 ~~------------------------------~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~  252 (347)
T 2gop_A          208 GK------------------------------EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK  252 (347)
T ss_dssp             TE------------------------------EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS
T ss_pred             Cc------------------------------eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC
Confidence            11                              1222223 334333  6555 46666543        4688888  55


Q ss_pred             ceeEEEEC-CeeeEE-EEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         307 GMKSEIVG-NKSFFD-VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       307 ~~~~~~~~-~~~i~~-~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      +....... ...+.. +.|+ ++ ++++++.++.++|| +..++   .. .+..+...|.+++|+|   .++++++.++.
T Consensus       253 ~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~---~~-~~~~~~~~v~~~~~s~---~~~~~~~~~~~  322 (347)
T 2gop_A          253 EVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE---IK-PIAKGRHWIMGFDVDE---IVVYLKETATR  322 (347)
T ss_dssp             CEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS---EE-EEECSSSEEEEEEESS---SEEEEEECSSS
T ss_pred             ceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc---eE-EEecCCCeEEeeeeeC---cEEEEEcCCCC
Confidence            54333333 236775 8999 88 88999999999999 87332   32 3334577899999998   57777777776


Q ss_pred             E-EEEec
Q psy2107         385 V-KLWDL  390 (391)
Q Consensus       385 v-~iwdl  390 (391)
                      . .||.+
T Consensus       323 ~~~l~~~  329 (347)
T 2gop_A          323 LRELFTW  329 (347)
T ss_dssp             CCEEEEE
T ss_pred             hHHheEe
Confidence            5 77764

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.52  E-value=4e-12  Score=122.21  Aligned_cols=242  Identities=12%  Similarity=0.032  Sum_probs=149.6

Q ss_pred             CCCcEEEEEec--CCEEEEEECC-----CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYD-----HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------  181 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------  181 (391)
                      |...+..++|+  |++|+.++.+     ..|++||+.+........+...+..++|   +++ +.|+.++.++.      
T Consensus       161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~w---spD-~~l~~~~~~~~~~~~~~  236 (741)
T 1yr2_A          161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAW---LGN-DALLYSRFAEPKEGQAF  236 (741)
T ss_dssp             --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEE---STT-SEEEEEECCCC------
T ss_pred             CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEE---ECC-CEEEEEEecCccccccc
Confidence            44468888998  6677776554     3699999965544433222222357889   778 77887776654      


Q ss_pred             --------EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCCCCC
Q psy2107         182 --------AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       182 --------v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                              |++|++.........+.....+...+..+.|+|+|++|+..+.++     .|.+||+.++..          
T Consensus       237 ~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~----------  306 (741)
T 1yr2_A          237 QALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI----------  306 (741)
T ss_dssp             --CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE----------
T ss_pred             ccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC----------
Confidence                    778875422221233333233334588999999999988877544     799999865310          


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEEC----CCeEEEEecccC--ceeEEEECCe-eeEEE
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSW----DHTLKIWDAELG--GMKSEIVGNK-SFFDV  321 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~----dg~i~iwd~~~~--~~~~~~~~~~-~i~~~  321 (391)
                                       .....+..+...+....+.+++.|+..+.    .+.|.+||+.++  .....+..+. .+..+
T Consensus       307 -----------------~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~  369 (741)
T 1yr2_A          307 -----------------GPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESV  369 (741)
T ss_dssp             -----------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEE
T ss_pred             -----------------cccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEE
Confidence                             11233444444444444445666777665    345999999875  2333333333 46667


Q ss_pred             EECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCCCEEEEee---CCCcEEEEec
Q psy2107         322 HYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDPQLFVSAS---FDNSVKLWDL  390 (391)
Q Consensus       322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iwdl  390 (391)
                      +++ ++.++++...|+..+||.+... +. ....+.. +...|..++++|++..++++.+   ..++|++||+
T Consensus       370 ~~~-~~~lv~~~~~dg~~~l~~~~~~-g~-~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~  439 (741)
T 1yr2_A          370 GIA-GNRLFASYIHDAKSQVLAFDLD-GK-PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP  439 (741)
T ss_dssp             EEE-BTEEEEEEEETTEEEEEEEETT-SC-EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred             EEE-CCEEEEEEEECCEEEEEEEeCC-CC-ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence            777 5667788888888777755421 11 3334443 3667899999996665555544   3478999986

>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}

Probab=99.51  E-value=9.7e-12  Score=105.81  Aligned_cols=206  Identities=10%  Similarity=0.034  Sum_probs=137.7

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      ..+..+..+.....+++|   +++++ +++++..++.|..|+..  ..    ...+..+...+.+++++++++++++...
T Consensus        18 ~~~~~l~~~~~~~eg~~~---d~~g~~l~~~~~~~~~i~~~~~~--~~----~~~~~~~~~~~~~l~~~~dg~l~v~~~~   88 (296)
T 3e5z_A           18 AEARRLADGFTWTEGPVY---VPARSAVIFSDVRQNRTWAWSDD--GQ----LSPEMHPSHHQNGHCLNKQGHLIACSHG   88 (296)
T ss_dssp             CCCEEEECCCSSEEEEEE---EGGGTEEEEEEGGGTEEEEEETT--SC----EEEEESSCSSEEEEEECTTCCEEEEETT
T ss_pred             CcEEEEecCCccccCCeE---eCCCCEEEEEeCCCCEEEEEECC--CC----eEEEECCCCCcceeeECCCCcEEEEecC
Confidence            344455556677889999   55676 78888889999999943  22    3455567778999999999998877777


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEE-----E-----
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITS-----S-----  293 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~-----~-----  293 (391)
                      ++.|.+||..+++...                          ....... ....+..+++++++.++.+     +     
T Consensus        89 ~~~i~~~d~~~g~~~~--------------------------~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~  142 (296)
T 3e5z_A           89 LRRLERQREPGGEWES--------------------------IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEE  142 (296)
T ss_dssp             TTEEEEECSTTCCEEE--------------------------EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGG
T ss_pred             CCeEEEEcCCCCcEEE--------------------------EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccc
Confidence            7899999986543210                          0000111 1234678999987776663     2     


Q ss_pred             --------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC-CCCcceEEEEeccccCcEE
Q psy2107         294 --------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK-VKEGAIVKSTFSSHKEWVQ  364 (391)
Q Consensus       294 --------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~-~~~~~~~~~~~~~h~~~v~  364 (391)
                              ..+.|..++.. ++.............++|+|+++.+++.+.++.|++|++. .+........+..+...+.
T Consensus       143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~  221 (296)
T 3e5z_A          143 GYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTD  221 (296)
T ss_dssp             SSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCC
T ss_pred             cccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCC
Confidence                    13456666655 5443333334467889999999988777788999999986 2221001222234556678


Q ss_pred             EEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         365 SVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       365 ~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++++++ +++++++.  ++.|.+||.
T Consensus       222 ~i~~d~-~G~l~v~~--~~~v~~~~~  244 (296)
T 3e5z_A          222 GLRVDA-GGLIWASA--GDGVHVLTP  244 (296)
T ss_dssp             SEEEBT-TSCEEEEE--TTEEEEECT
T ss_pred             eEEECC-CCCEEEEc--CCeEEEECC
Confidence            899999 55666655  789999985

>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*

Probab=99.50  E-value=3.3e-10  Score=96.21  Aligned_cols=231  Identities=8%  Similarity=0.006  Sum_probs=155.4

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ...+.+++++  +.++++...++.|..|+.++.... .+......+.++++   ++++.++++...++.|..||.   ..
T Consensus        56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~d~---~g  129 (299)
T 2z2n_A           56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITE---GPNGDIWFTEMNGNRIGRITD---DG  129 (299)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECT---TC
T ss_pred             cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEE---CCCCCEEEEecCCceEEEECC---CC
Confidence            4578889987  556666666889999998654322 22334567889998   677888887777889999984   22


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ... ......+...+..+++.++++++++...++.|..||. +++.                            ......
T Consensus       130 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~----------------------------~~~~~~  179 (299)
T 2z2n_A          130 KIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI----------------------------TEFKIP  179 (299)
T ss_dssp             CEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE----------------------------EEEECS
T ss_pred             CEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE----------------------------EEeeCC
Confidence            222 1222334567899999999988777777789999988 4221                            001122


Q ss_pred             CccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         273 GHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+...+..+++.+++.++.+. .++.|.+||. +++... +...   ..+.+++++++|++.++...++.|..||.. +.
T Consensus       180 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~  256 (299)
T 2z2n_A          180 TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NI  256 (299)
T ss_dssp             STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TE
T ss_pred             CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cc
Confidence            234457789998777666665 4789999999 666433 3322   468899999999977776678899999973 22


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        ........+...+.++++ + ++.++++.+ .+.+..+|.
T Consensus       257 --~~~~~~~~~~~~~~~i~~-~-~g~l~v~~~-~~~l~~~~~  293 (299)
T 2z2n_A          257 --IEEYPIQIKSAEPHGICF-D-GETIWFAME-CDKIGKLTL  293 (299)
T ss_dssp             --EEEEECSSSSCCEEEEEE-C-SSCEEEEET-TTEEEEEEE
T ss_pred             --eEEEeCCCCCCccceEEe-c-CCCEEEEec-CCcEEEEEc
Confidence              122223455567999999 7 666666554 456666654

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.50  E-value=6.9e-11  Score=108.87  Aligned_cols=225  Identities=14%  Similarity=0.076  Sum_probs=151.1

Q ss_pred             CCEEEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         126 NDWILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      +.++++...+++|.++|..+ +.+..+. ....+..+.|   +++++++++++.|+.|.+||+.  ..+.+.+..+... 
T Consensus       167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g~~p~~v~~---SpDGr~lyv~~~dg~V~viD~~--~~t~~~v~~i~~G-  239 (567)
T 1qks_A          167 NLFSVTLRDAGQIALIDGSTYEIKTVLD-TGYAVHISRL---SASGRYLFVIGRDGKVNMIDLW--MKEPTTVAEIKIG-  239 (567)
T ss_dssp             GEEEEEETTTTEEEEEETTTCCEEEEEE-CSSCEEEEEE---CTTSCEEEEEETTSEEEEEETT--SSSCCEEEEEECC-
T ss_pred             ceEEEEeCCCCeEEEEECCCCeEEEEEe-CCCCccceEE---CCCCCEEEEEcCCCeEEEEECC--CCCCcEeEEEecC-
Confidence            34677777889999999954 4444554 3446778999   8899999999999999999953  1133455555543 


Q ss_pred             CCeEEEEEc----CCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC------
Q psy2107         205 RGLETVTVS----ESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG------  273 (391)
Q Consensus       205 ~~v~~l~~~----~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  273 (391)
                      .....++|+    |+|+++++++. ++.+.++|..+.+.                             +..+..      
T Consensus       240 ~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-----------------------------~~~i~~~~~~~~  290 (567)
T 1qks_A          240 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-----------------------------KKIQSTRGMTYD  290 (567)
T ss_dssp             SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-----------------------------EEEEECCEECTT
T ss_pred             CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE-----------------------------EEEEeccccccc
Confidence            346799999    69998887765 58999999876332                             222221      


Q ss_pred             ----ccC-cccEEEeccC-Ce-EEEEECCCeEEEEecccCce--eEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEc
Q psy2107         274 ----HKE-AISAVQWTAV-DE-IITSSWDHTLKIWDAELGGM--KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYD  343 (391)
Q Consensus       274 ----~~~-~v~~~~~~~~-~~-l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd  343 (391)
                          |.. .+..+..++. .. ++....+|.|.++|..+.+.  +..+........+.|+|+|++++++. .++.|.++|
T Consensus       291 ~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD  370 (567)
T 1qks_A          291 EQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVID  370 (567)
T ss_dssp             TCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred             cccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEE
Confidence                112 4566666643 33 45556679999999876543  23333444567889999999887655 578999999


Q ss_pred             CCCCCcceEEEEec-----cccCcEEEEEECCCCCCEEEEee-CCCcEEEEec
Q psy2107         344 PKVKEGAIVKSTFS-----SHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       344 ~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                      +.+++   +...+.     .|.+.-..+ ++|+++.+++++. .++.|.++|.
T Consensus       371 ~~t~k---l~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~  419 (567)
T 1qks_A          371 TKEGK---LVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGT  419 (567)
T ss_dssp             TTTTE---EEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEEC
T ss_pred             CCCCc---EEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecC
Confidence            98765   333332     243222222 5785566666654 4689999985

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.47  E-value=7.9e-10  Score=93.88  Aligned_cols=233  Identities=9%  Similarity=-0.009  Sum_probs=157.7

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ...+.+++++  +.++++...++.|.+||..+.... .+......+.++++   ++++.+.++...++.|..||..   .
T Consensus        19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~v~~~d~~---g   92 (300)
T 2qc5_A           19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIV---SSLGDIWFTENGANKIGKLSKK---G   92 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CTTSCEEEEETTTTEEEEECTT---S
T ss_pred             CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEE---CCCCCEEEEecCCCeEEEECCC---C
Confidence            4467788887  566666667899999998733322 23334467889998   7778877777668889999843   2


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ... ..........+.++++.++++++++...++.|..+|.. ++.                            ....+.
T Consensus        93 ~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~----------------------------~~~~~~  142 (300)
T 2qc5_A           93 GFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTI----------------------------YEYDLP  142 (300)
T ss_dssp             CEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCE----------------------------EEEECS
T ss_pred             CeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCE----------------------------EEccCC
Confidence            222 12222234678999999999988777768889999875 221                            011122


Q ss_pred             CccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEEC---CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         273 GHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIVG---NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~---~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .....+..+++.+++.++.+.. ++.|..||. +++... +..   ...+..+++.++|++.++....+.|.+|+. .+.
T Consensus       143 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~  219 (300)
T 2qc5_A          143 NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE  219 (300)
T ss_dssp             STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred             CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence            2344678888887666666554 788999998 555443 332   235788999999987777766788999997 332


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        ........+...+.++++++ +++++++...++.|..||.
T Consensus       220 --~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~  258 (300)
T 2qc5_A          220 --ISEYDIPTPNARPHAITAGK-NSEIWFTEWGANQIGRITN  258 (300)
T ss_dssp             --EEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECT
T ss_pred             --EEEEECCCCCCCceEEEECC-CCCEEEeccCCCeEEEECC
Confidence              12222334556789999999 5566776666788888874

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.46  E-value=1.9e-10  Score=102.24  Aligned_cols=234  Identities=9%  Similarity=0.018  Sum_probs=154.0

Q ss_pred             CcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCC
Q psy2107         117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESN  192 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~  192 (391)
                      .....|+++  ++++++...++.|++||..+..+..+........ ++|   ++++..|+++..++  .|.+++..  ..
T Consensus       131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~---~~~g~~l~~~d~~~~~~I~~~d~~--~~  204 (409)
T 3hrp_A          131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAV---TKDKQRVYSIGWEGTHTVYVYMKA--SG  204 (409)
T ss_dssp             CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEE---CTTSSEEEEEBSSTTCEEEEEEGG--GT
T ss_pred             CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeE---ecCCCcEEEEecCCCceEEEEEcC--CC
Confidence            357788887  5566666677999999997666555443333334 888   77888888888766  67777743  22


Q ss_pred             ce-eEEEEEec-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         193 SI-ECIHVCRG-HERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       193 ~~-~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      .. ..+..+.. ....+.+++++|++..|+.+..++.|+.||..++...                           ....
T Consensus       205 ~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~---------------------------~~~~  257 (409)
T 3hrp_A          205 WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT---------------------------LIKQ  257 (409)
T ss_dssp             TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE---------------------------EEEE
T ss_pred             ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE---------------------------EEec
Confidence            21 12212222 4566789999995555666777889999998753210                           0000


Q ss_pred             --ecCccCcc--cEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC----------------eeeEEEEECCCCC
Q psy2107         271 --LKGHKEAI--SAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN----------------KSFFDVHYSPLSK  328 (391)
Q Consensus       271 --~~~~~~~v--~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~----------------~~i~~~~~~p~~~  328 (391)
                        ..++...-  ..++|++ ++.|+.+ ...+.|+.|+.... . ..+...                .....++++|+|+
T Consensus       258 ~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~  335 (409)
T 3hrp_A          258 LELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN  335 (409)
T ss_dssp             CCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred             ccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence              11111111  3899997 5776655 45789999987643 2 222221                2367899999999


Q ss_pred             EEEEee-CCCcEEEEcCCCCCcceEEEEeccc---------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         329 LVITAS-ADKQIRLYDPKVKEGAIVKSTFSSH---------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       329 ~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++++-+ .++.|+.|++..+.    +..+.++               -.....+++++ ++.++++-..++.|+.+++
T Consensus       336 lyvad~~~~~~I~~~~~~~G~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~-~g~lyVad~~n~~Ir~i~~  408 (409)
T 3hrp_A          336 FYIVDGFKGYCLRKLDILDGY----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDG-EGGYWIAEAWGKAIRKYAV  408 (409)
T ss_dssp             EEEEETTTTCEEEEEETTTTE----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS-SSEEEEEESTTCEEEEEEE
T ss_pred             EEEEeCCCCCEEEEEECCCCE----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcC-CCCEEEEECCCCeEEEEEe
Confidence            888877 78999999975543    2333333               24689999999 4778888888899998876

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.45  E-value=1.7e-10  Score=98.04  Aligned_cols=225  Identities=12%  Similarity=0.125  Sum_probs=144.8

Q ss_pred             cEEEEEec---CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         118 WVSAIDFH---NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       118 ~V~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      .--+..|+   +.++++...++.|..||..+.....+ .....+.++++   ++++.++++ . ++.|.+||..  +...
T Consensus        14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~---~~dG~l~v~-~-~~~l~~~d~~--~g~~   85 (297)
T 3g4e_A           14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVAL---RQSGGYVAT-I-GTKFCALNWK--EQSA   85 (297)
T ss_dssp             BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEE---BTTSSEEEE-E-TTEEEEEETT--TTEE
T ss_pred             cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEE---CCCCCEEEE-E-CCeEEEEECC--CCcE
Confidence            44566776   33677777789999999966544433 24567899999   677875554 4 5678888843  3333


Q ss_pred             eEEEEEec--CCCCeEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         195 ECIHVCRG--HERGLETVTVSESRQQFATGGWD---------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       195 ~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      ..+.....  ....+..++++|+|+++++...+         ..-.+|.++...                          
T Consensus        86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g--------------------------  139 (297)
T 3g4e_A           86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH--------------------------  139 (297)
T ss_dssp             EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS--------------------------
T ss_pred             EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC--------------------------
Confidence            33332211  12357889999999966654321         234555553211                          


Q ss_pred             CCCceeeecCccCcccEEEeccCCe-E-EEEECCCeEEEEec--ccCcee--EEE-EC---CeeeEEEEECCCCCEEEEe
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDA--ELGGMK--SEI-VG---NKSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~dg~i~iwd~--~~~~~~--~~~-~~---~~~i~~~~~~p~~~~l~~g  333 (391)
                         ....+..+......++|++++. + ++.+.++.|.+||+  .++...  ..+ ..   ......++++++|++.++.
T Consensus       140 ---~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~  216 (297)
T 3g4e_A          140 ---HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC  216 (297)
T ss_dssp             ---CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred             ---CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence               1112222334457899997664 5 44556789999987  455432  112 11   2357789999999988887


Q ss_pred             eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC-CCCCCEEEEeeCC
Q psy2107         334 SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS-PIDPQLFVSASFD  382 (391)
Q Consensus       334 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d  382 (391)
                      ...+.|..||..+++   +...+..+...+++++|. |++..++++...+
T Consensus       217 ~~~~~v~~~d~~tG~---~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~  263 (297)
T 3g4e_A          217 YNGGRVIRLDPVTGK---RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD  263 (297)
T ss_dssp             ETTTEEEEECTTTCC---EEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred             cCCCEEEEEcCCCce---EEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence            778899999987666   666666666789999998 7666666666544

>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}

Probab=99.43  E-value=4.8e-11  Score=100.08  Aligned_cols=179  Identities=9%  Similarity=0.040  Sum_probs=132.1

Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE-RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      .+++|++++.|+.|.+||..    +.+.+..+..+. ..+.++.+.|+|++++  +.++.|..||. +++          
T Consensus         4 ~~~~lv~~~~~~~v~~~d~~----tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~----------   66 (276)
T 3no2_A            4 PQHLLVGGSGWNKIAIINKD----TKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGR----------   66 (276)
T ss_dssp             CCEEEEECTTCSEEEEEETT----TTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSC----------
T ss_pred             CCcEEEeeCCCCEEEEEECC----CCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCC----------
Confidence            46889999999999999932    446677777665 4789999999999888  45678999998 533          


Q ss_pred             CCccccccccccccCCCCCceeeecCc-cCcccEEEeccCCe-EEEEEC-CCeEEEEecccCceeEEEECC-------ee
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWTAVDE-IITSSW-DHTLKIWDAELGGMKSEIVGN-------KS  317 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-l~s~~~-dg~i~iwd~~~~~~~~~~~~~-------~~  317 (391)
                                         .+..+..+ ...+.++.+.+++. +++.+. ++.|..+|. +++.+..+...       ..
T Consensus        67 -------------------~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~  126 (276)
T 3no2_A           67 -------------------ELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQ  126 (276)
T ss_dssp             -------------------EEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGS
T ss_pred             -------------------EEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccc
Confidence                               34444433 24567788886665 555565 678888885 78877776522       23


Q ss_pred             eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       318 i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ...+++.++|+++++...++.|..||.. ++   .+..+... ..+.++...+ ++.++++++.++.|..+|.
T Consensus       127 ~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~---~~w~~~~~-~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~  193 (276)
T 3no2_A          127 FRQINKNKKGNYLVPLFATSEVREIAPN-GQ---LLNSVKLS-GTPFSSAFLD-NGDCLVACGDAHCFVQLNL  193 (276)
T ss_dssp             CSCCEECTTSCEEEEETTTTEEEEECTT-SC---EEEEEECS-SCCCEEEECT-TSCEEEECBTTSEEEEECT
T ss_pred             ccCceECCCCCEEEEecCCCEEEEECCC-CC---EEEEEECC-CCccceeEcC-CCCEEEEeCCCCeEEEEeC
Confidence            4456788999999999999999999986 55   55555543 3456778888 6678888888888988875

>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*

Probab=99.42  E-value=5.5e-11  Score=113.84  Aligned_cols=201  Identities=10%  Similarity=0.009  Sum_probs=130.1

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL-  227 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-  227 (391)
                      |...+..++|   +|++++|+.+..++     .|++||+.  ++..... .+. + ..+..++|+|+|+.|+.++.++. 
T Consensus       123 ~~~~~~~~~~---SPDg~~la~~~~~~G~~~~~i~v~d~~--tg~~~~~-~~~-~-~~~~~~~wspDg~~l~~~~~~~~~  194 (710)
T 2xdw_A          123 GTVALRGYAF---SEDGEYFAYGLSASGSDWVTIKFMKVD--GAKELPD-VLE-R-VKFSCMAWTHDGKGMFYNAYPQQD  194 (710)
T ss_dssp             SCEEEEEEEE---CTTSSEEEEEEEETTCSCEEEEEEETT--TTEEEEE-EEE-E-ECSCCEEECTTSSEEEEEECCCCS
T ss_pred             CCEEEEEEEE---CCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCcc-ccc-C-cccceEEEEeCCCEEEEEEECCcc
Confidence            4446888999   78899888776543     89999964  3332221 222 1 23678999999999999888766 


Q ss_pred             ---------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107         228 ---------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT  291 (391)
Q Consensus       228 ---------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s  291 (391)
                                     |++|++.++...                         ...+.....|...+..+.|+|++. |+.
T Consensus       195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~-------------------------~~~v~~~~~~~~~~~~~~~SpDg~~l~~  249 (710)
T 2xdw_A          195 GKSDGTETSTNLHQKLYYHVLGTDQSE-------------------------DILCAEFPDEPKWMGGAELSDDGRYVLL  249 (710)
T ss_dssp             SCCSSSCCCCCCCCEEEEEETTSCGGG-------------------------CEEEECCTTCTTCEEEEEECTTSCEEEE
T ss_pred             ccccccccccCCCCEEEEEECCCCccc-------------------------ceEEeccCCCCeEEEEEEEcCCCCEEEE
Confidence                           999998763320                         011222223455577899997665 555


Q ss_pred             EEC-----CCeEEEEeccc------Cc-eeEEEECCe-eeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEE
Q psy2107         292 SSW-----DHTLKIWDAEL------GG-MKSEIVGNK-SFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       292 ~~~-----dg~i~iwd~~~------~~-~~~~~~~~~-~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~  354 (391)
                      ++.     +..|.+||+.+      +. ....+..+. .+. ..|+|+|+.|+..+..    +.|.+||+........ .
T Consensus       250 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~-~  327 (710)
T 2xdw_A          250 SIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKW-K  327 (710)
T ss_dssp             EEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGC-E
T ss_pred             EEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccc-e
Confidence            543     56899999987      53 344554443 333 3588899877766543    3699999876532111 2


Q ss_pred             EeccccC--cEEEEEECCCCCCEEEEeeCCCcE--EEEec
Q psy2107         355 TFSSHKE--WVQSVRWSPIDPQLFVSASFDNSV--KLWDL  390 (391)
Q Consensus       355 ~~~~h~~--~v~~~~~~~~~~~~l~s~~~dg~v--~iwdl  390 (391)
                      .+..|..  .+..++|++ ++.++++...|+..  .+||+
T Consensus       328 ~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~  366 (710)
T 2xdw_A          328 VLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDL  366 (710)
T ss_dssp             EEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEET
T ss_pred             eccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEEC
Confidence            3333433  688899997 67788999999865  45554

>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}

Probab=99.41  E-value=3.4e-11  Score=114.95  Aligned_cols=201  Identities=8%  Similarity=-0.008  Sum_probs=130.6

Q ss_pred             CCCCCeeEEEEEecCCCCeEEE-----EEeCCCcEEEEeecCCCCceeEEEEEecCCCCe--EEEEEcCCCCEEEEEeCC
Q psy2107         153 GHGGPVKGVAWLYNDGKDAAFI-----SVSTDQTAMIWEWKVESNSIECIHVCRGHERGL--ETVTVSESRQQFATGGWD  225 (391)
Q Consensus       153 ~~~~~v~~l~~~~~~~~~~~l~-----s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~sg~~d  225 (391)
                      +|...+..++|   +|++++||     .|+.+..|++||+...  ..  +.  ..+...+  ..++|+|+|+.|+.++.|
T Consensus       118 ~~~~~~~~~~~---SPDG~~la~~~~~~G~~~~~i~v~dl~tg--~~--~~--~~~~~~~~~~~~~wspDg~~l~~~~~d  188 (695)
T 2bkl_A          118 DGTVSLGTWAV---SWDGKKVAFAQKPNAADEAVLHVIDVDSG--EW--SK--VDVIEGGKYATPKWTPDSKGFYYEWLP  188 (695)
T ss_dssp             SSCEEEEEEEE---CTTSSEEEEEEEETTCSCCEEEEEETTTC--CB--CS--SCCBSCCTTCCCEECTTSSEEEEEECC
T ss_pred             CCCEEEEEEEE---CCCCCEEEEEECCCCCceEEEEEEECCCC--CC--cC--CcccCcccccceEEecCCCEEEEEEec
Confidence            45557889999   78899888     4445578999996532  21  10  1122222  689999999999999887


Q ss_pred             Cc-------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEE
Q psy2107         226 CL-------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IIT  291 (391)
Q Consensus       226 g~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s  291 (391)
                      ..             |++|++.++...                         ...+.....+...+..+.|++++. |+.
T Consensus       189 ~~~~~~~~~~~~~~~v~~~~l~t~~~~-------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~  243 (695)
T 2bkl_A          189 TDPSIKVDERPGYTTIRYHTLGTEPSK-------------------------DTVVHERTGDPTTFLQSDLSRDGKYLFV  243 (695)
T ss_dssp             CCTTSCGGGGGGGCEEEEEETTSCGGG-------------------------CEEEECCCCCTTCEEEEEECTTSCCEEE
T ss_pred             CCCCCccccCCCCCEEEEEECCCCchh-------------------------ceEEEecCCCCEEEEEEEECCCCCEEEE
Confidence            76             999999764320                         112233334556788999997664 666


Q ss_pred             EECCC----eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee---CCCcEEEEcCCCCCcceEEEEeccc-cCcE
Q psy2107         292 SSWDH----TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS---ADKQIRLYDPKVKEGAIVKSTFSSH-KEWV  363 (391)
Q Consensus       292 ~~~dg----~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~---~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v  363 (391)
                      ++.++    .|.+||..++................+ ++|.+++.+.   .++.|.+||+.++........+..+ ...+
T Consensus       244 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l  322 (695)
T 2bkl_A          244 YILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASL  322 (695)
T ss_dssp             EEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEE
T ss_pred             EEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeE
Confidence            66555    677777666655444444445555556 5666444443   2578999998765421112233333 4568


Q ss_pred             EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..++|+  ++.++++...|+..+||.+
T Consensus       323 ~~~~~~--~~~lv~~~~~dg~~~l~~~  347 (695)
T 2bkl_A          323 LSVSIV--GGHLSLEYLKDATSEVRVA  347 (695)
T ss_dssp             EEEEEE--TTEEEEEEEETTEEEEEEE
T ss_pred             EEEEEE--CCEEEEEEEECCEEEEEEE
Confidence            888887  5578999999999988854

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=99.40  E-value=4.9e-11  Score=113.66  Aligned_cols=239  Identities=13%  Similarity=0.129  Sum_probs=146.8

Q ss_pred             CCCcEEEEEec--CCEEEEE-E----CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc------
Q psy2107         115 HDDWVSAIDFH--NDWILTG-C----YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT------  181 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~-~----~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~------  181 (391)
                      |...+..++|+  |++||-+ +    ....|++||+.+........+......++|   + +++.|+.++.+..      
T Consensus       127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~W---s-Dg~~l~y~~~~~~~~~~~~  202 (693)
T 3iuj_A          127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISW---L-GNEGFFYSSYDKPDGSELS  202 (693)
T ss_dssp             SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEE---E-TTTEEEEEESSCCC-----
T ss_pred             CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEE---e-CCCEEEEEEecCccccccc
Confidence            56678888998  5566633 2    235799999955443322111111356789   6 7777888877743      


Q ss_pred             -------EEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeC----CCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107         182 -------AMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGGW----DCLLKIWSADISKERGDPSENGDEG  249 (391)
Q Consensus       182 -------v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~----dg~i~iwd~~~~~~~~~~~~~~~~~  249 (391)
                             |++|++.........+..... |...+..+.|+|+|++|+....    +..|.++|+.++..           
T Consensus       203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-----------  271 (693)
T 3iuj_A          203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-----------  271 (693)
T ss_dssp             --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC-----------
T ss_pred             ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC-----------
Confidence                   888886533333344444333 4556788999999998865432    35899999875321           


Q ss_pred             ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CC---CeEEEEecccCce--eEEEECC-eeeEEEE
Q psy2107         250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WD---HTLKIWDAELGGM--KSEIVGN-KSFFDVH  322 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~d---g~i~iwd~~~~~~--~~~~~~~-~~i~~~~  322 (391)
                                       ....+..+.........++++.|+..+ .+   +.|..+|+.++..  ...+..+ ..+.  .
T Consensus       272 -----------------~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~  332 (693)
T 3iuj_A          272 -----------------PLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--T  332 (693)
T ss_dssp             -----------------CCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--E
T ss_pred             -----------------ceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--E
Confidence                             233444455555454333556655444 33   6799999987654  2344333 3443  8


Q ss_pred             ECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC---CcEEEEec
Q psy2107         323 YSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD---NSVKLWDL  390 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d---g~v~iwdl  390 (391)
                      |+++++.|+....++   .|++|++....   .........+.+..+.+++++..++++.+..   +.+..||+
T Consensus       333 ~s~~g~~lv~~~~~~g~~~l~~~d~~g~~---~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~  403 (693)
T 3iuj_A          333 VHSGSGYLFAEYMVDATARVEQFDYEGKR---VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP  403 (693)
T ss_dssp             EEEETTEEEEEEEETTEEEEEEECTTSCE---EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred             EEEECCEEEEEEEECCeeEEEEEECCCCe---eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence            889998887765544   68999986432   2222223445678888888666666665532   67888876

>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A

Probab=99.40  E-value=6.2e-11  Score=99.25  Aligned_cols=194  Identities=8%  Similarity=-0.004  Sum_probs=133.1

Q ss_pred             CcEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         117 DWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ..+.+++++  ++++++.. ++.|.+||..+.....+.. ....+..+++   ++++.++++...++.|.+|+.  ....
T Consensus        67 ~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~---~~~g~l~v~~~~~~~i~~~~~--~~~~  140 (270)
T 1rwi_B           67 YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAV---DTQGAVYVADRGNNRVVKLAA--GSKT  140 (270)
T ss_dssp             CSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEE---CTTCCEEEEEGGGTEEEEECT--TCCS
T ss_pred             CCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEE---CCCCCEEEEECCCCEEEEEEC--CCce
Confidence            456778887  55555444 8899999997765554432 2356889999   777888887777889999973  2221


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                        ...........+.+++++++++++++...++.|.+||......                             ......
T Consensus       141 --~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-----------------------------~~~~~~  189 (270)
T 1rwi_B          141 --QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-----------------------------VVLPFT  189 (270)
T ss_dssp             --CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE-----------------------------EECCCS
T ss_pred             --eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce-----------------------------Eeeccc
Confidence              1111222334678999999999777777788999999865221                             111112


Q ss_pred             ccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         274 HKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      +...+..+++++++.++.+. .++.|.+||............. ..+.+++++++|+++++...++.|++|++...
T Consensus       190 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~  265 (270)
T 1rwi_B          190 DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH  265 (270)
T ss_dssp             SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred             CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence            22556789999776766555 5789999998765433222122 46789999999998888888999999997643

>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*

Probab=99.39  E-value=6.2e-12  Score=109.33  Aligned_cols=167  Identities=9%  Similarity=0.011  Sum_probs=123.1

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCC------------ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRG------------EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~------------~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      .++.++++  ..++++|+.++ +.+|+++.            +.... ..+.. |+.|+|     ++..|+++ .++.|+
T Consensus        39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f-----d~~~L~v~-~~~~l~  109 (388)
T 1xip_A           39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF-----HGDQVLVS-TRNALY  109 (388)
T ss_dssp             CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE-----ETTEEEEE-ESSEEE
T ss_pred             cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE-----CCCEEEEE-cCCcEE
Confidence            56677776  66899999885 56697521            11122 23566 999999     56788888 889999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +||++...    .......|...+.++.+.+..  +++++.||.|.+||+.++.                          
T Consensus       110 v~dv~sl~----~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~--------------------------  157 (388)
T 1xip_A          110 SLDLEELS----EFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKS--------------------------  157 (388)
T ss_dssp             EEESSSTT----CEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCC--------------------------
T ss_pred             EEEchhhh----ccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCc--------------------------
Confidence            99965322    223345567788888877653  8889999999999997522                          


Q ss_pred             CCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCce--eEEE------E----CCeeeEEEEECCCCCEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGM--KSEI------V----GNKSFFDVHYSPLSKLVI  331 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~------~----~~~~i~~~~~~p~~~~l~  331 (391)
                         ..    .+...|+|++|+|.+ ++.|..||++++|+...+..  ..++      .    +...+.++.|.+++.+++
T Consensus       158 ---~~----~~~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv  229 (388)
T 1xip_A          158 ---TK----QLAQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA  229 (388)
T ss_dssp             ---EE----EEEESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred             ---cc----cccCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence               11    145689999999988 78899999999999887775  5566      2    345899999999999888


Q ss_pred             Ee
Q psy2107         332 TA  333 (391)
Q Consensus       332 ~g  333 (391)
                      +-
T Consensus       230 ~y  231 (388)
T 1xip_A          230 VF  231 (388)
T ss_dssp             EE
T ss_pred             EE
Confidence            73

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=99.37  E-value=2.2e-09  Score=93.93  Aligned_cols=240  Identities=9%  Similarity=-0.033  Sum_probs=139.1

Q ss_pred             eEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCCceeEEEEEecC--
Q psy2107         137 SVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESNSIECIHVCRGH--  203 (391)
Q Consensus       137 ~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~--  203 (391)
                      +|.+||. +++.+..+..-..+  .+++   +++++.++.+.          .++.|.+||..    ..+.+..+...  
T Consensus        48 ~v~v~D~~t~~~~~~i~~g~~p--~i~~---spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~----t~~~~~~i~~~~~  118 (373)
T 2mad_H           48 QQWVLDAGSGSILGHVNGGFLP--NPVA---AHSGSEFALASTSFSRIAKGKRTDYVEVFDPV----TFLPIADIELPDA  118 (373)
T ss_pred             EEEEEECCCCeEEEEecCCCCC--CeEE---CCCCCEEEEEeccccccccCCCCCeEEEEECC----CCcEEEEEECCCc
Confidence            8899998 44555555543333  8899   77888888775          36789999954    22333333211  


Q ss_pred             -----CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCC-CCCCCCCCccc-c---------ccccccccCCCC
Q psy2107         204 -----ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGD-PSENGDEGTTS-K---------KRKKEYSSASSR  265 (391)
Q Consensus       204 -----~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~-~---------~~~~~~~~~~~~  265 (391)
                           ......++|+|+|++|+++..  ++.|.++| .+++.... ........... .         .......+. ..
T Consensus       119 ~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g  196 (373)
T 2mad_H          119 PRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AG  196 (373)
T ss_pred             cccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CC
Confidence                 123458999999999998874  47899999 88776544 32211100000 0         000000111 11


Q ss_pred             Cceeeec-----CccCcc-cEEEec-cCCeEEEEECCCeEEEEecccCc--eeEEEEC-----------CeeeEEEEECC
Q psy2107         266 TPLITLK-----GHKEAI-SAVQWT-AVDEIITSSWDHTLKIWDAELGG--MKSEIVG-----------NKSFFDVHYSP  325 (391)
Q Consensus       266 ~~~~~~~-----~~~~~v-~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~-----------~~~i~~~~~~p  325 (391)
                      +......     ....++ ....+. .++.++..+..+.+.+.|+..+.  .+..+..           +.....++++|
T Consensus       197 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~  276 (373)
T 2mad_H          197 GAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLK  276 (373)
T ss_pred             cEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECC
Confidence            1110100     001111 112233 23444444577889999987553  2222221           12234478899


Q ss_pred             CCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107         326 LSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR  391 (391)
Q Consensus       326 ~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr  391 (391)
                      +++.+.++..          .+.|.++|+.+.+   .+..+. -.....+++|+|++..+++++. .++.|.+||++
T Consensus       277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~---vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~  349 (373)
T 2mad_H          277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG  349 (373)
T ss_pred             CCCEEEEEeccCCcccccCCCCeEEEEECCCCE---EEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence            9887777543          3579999998766   555554 2335899999996553666666 58999999974

>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}

Probab=99.37  E-value=4.6e-09  Score=89.12  Aligned_cols=232  Identities=9%  Similarity=0.023  Sum_probs=152.9

Q ss_pred             CCcEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         116 DDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ...+.+++++  +.++++...++.|..||..+.... ........+.++++   ++++.++++...++.|..++..   .
T Consensus        61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~---~~~g~l~v~~~~~~~i~~~~~~---g  134 (300)
T 2qc5_A           61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPYGITE---GLNGDIWFTQLNGDRIGKLTAD---G  134 (300)
T ss_dssp             TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEE---CSTTCEEEEETTTTEEEEECTT---S
T ss_pred             CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCccceE---CCCCCEEEEccCCCeEEEECCC---C
Confidence            3568888887  556666666789999998754332 22334467889998   6678877777778889888842   2


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      ... ...+......+.++++.++++++++...++.|..+|. +++.                            ......
T Consensus       135 ~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~----------------------------~~~~~~  184 (300)
T 2qc5_A          135 TIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL----------------------------EEYPLP  184 (300)
T ss_dssp             CEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE----------------------------EEEECS
T ss_pred             CEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE----------------------------EEeeCC
Confidence            222 1223334567899999999997666666788999987 3221                            011122


Q ss_pred             CccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107         273 GHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG  349 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~  349 (391)
                      .+...+..+++.+++.++.+.. .+.|.+||. ++.......  ....+.+++++++|++.++...++.|..||.. +. 
T Consensus       185 ~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-  261 (300)
T 2qc5_A          185 TNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND-NT-  261 (300)
T ss_dssp             STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SC-
T ss_pred             CCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC-Cc-
Confidence            2345577889987777666654 568999998 555433221  22467899999999977776667899999973 22 


Q ss_pred             ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .....+......+.++++++ ++.++++.. . .|..+|.
T Consensus       262 -~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~-~-~i~~~~p  298 (300)
T 2qc5_A          262 -IQEYQLQTENAEPHGITFGK-DGSVWFALK-C-KIGKLNL  298 (300)
T ss_dssp             -EEEEECCSTTCCCCCEEECT-TSCEEEECS-S-EEEEEEE
T ss_pred             -EEEEECCccCCccceeEeCC-CCCEEEEcc-C-ceEEeCC
Confidence             12222333456689999999 556555554 4 7776664

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.34  E-value=1.8e-09  Score=93.01  Aligned_cols=222  Identities=8%  Similarity=-0.019  Sum_probs=136.8

Q ss_pred             EEEEEecC---CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         119 VSAIDFHN---DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       119 V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      ..+..|++   .++++...++.|..||..+.....+. ....+.+++|.   +++.++++. .+ .|.+||..  +....
T Consensus        51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~---~dg~l~v~~-~~-gl~~~d~~--~g~~~  122 (326)
T 2ghs_A           51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKI---SDSKQLIAS-DD-GLFLRDTA--TGVLT  122 (326)
T ss_dssp             EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEE---ETTEEEEEE-TT-EEEEEETT--TCCEE
T ss_pred             CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEe---CCCeEEEEE-CC-CEEEEECC--CCcEE
Confidence            45667763   36667777899999999766554443 35679999994   467766654 44 48888843  33333


Q ss_pred             EEEEEec--CCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         196 CIHVCRG--HERGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       196 ~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      .+.....  ....+..++++|+|+++++...+    +...+|.+++++                              ..
T Consensus       123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~------------------------------~~  172 (326)
T 2ghs_A          123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK------------------------------VT  172 (326)
T ss_dssp             EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE------------------------------EE
T ss_pred             EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc------------------------------EE
Confidence            2221111  12358899999999976654321    223344332211                              11


Q ss_pred             eecCccCcccEEEeccCC-eEEEE-ECCCeEEEEecc--cC-cee--EEEE----CCeeeEEEEECCCCCEEEEeeCCCc
Q psy2107         270 TLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAE--LG-GMK--SEIV----GNKSFFDVHYSPLSKLVITASADKQ  338 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~--~~-~~~--~~~~----~~~~i~~~~~~p~~~~l~~g~~dg~  338 (391)
                      .+..+......++|++++ .++.+ +.++.|.+||+.  ++ ...  ..+.    .......++++++|++.++...++.
T Consensus       173 ~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~  252 (326)
T 2ghs_A          173 KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA  252 (326)
T ss_dssp             EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE
T ss_pred             EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE
Confidence            111222345688999766 45444 557899999986  55 321  1221    1235678999999998877766789


Q ss_pred             EEEEcCCCCCcceEEEEeccccCcEEEEEEC-CCCCCEEEEeeCC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS-PIDPQLFVSASFD  382 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d  382 (391)
                      |.+||.. ++   ....+..+...+++++|+ |+++.++++...+
T Consensus       253 v~~~d~~-g~---~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~  293 (326)
T 2ghs_A          253 VDRYDTD-GN---HIARYEVPGKQTTCPAFIGPDASRLLVTSARE  293 (326)
T ss_dssp             EEEECTT-CC---EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred             EEEECCC-CC---EEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence            9999973 33   444555566679999998 7555555665554

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.28  E-value=2.6e-09  Score=91.07  Aligned_cols=228  Identities=8%  Similarity=0.044  Sum_probs=140.5

Q ss_pred             CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      +........|+  ++ +++++..++.|..|+.++. ...+..+...+..+++   +++++++++...++.|..|+.+   
T Consensus        43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~---d~dG~l~v~~~~~~~v~~~~~~---  115 (305)
T 3dr2_A           43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAV---DAQQRLVHCEHGRRAITRSDAD---  115 (305)
T ss_dssp             CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEE---CTTSCEEEEETTTTEEEEECTT---
T ss_pred             CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeE---CCCCCEEEEECCCCEEEEECCC---
Confidence            44466777886  55 6777778899999998654 4444556677889999   7788877666666889999842   


Q ss_pred             CceeEEEE-EecC-CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         192 NSIECIHV-CRGH-ERGLETVTVSESRQQFAT----GGW-------------DCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       192 ~~~~~~~~-~~~~-~~~v~~l~~~~~~~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      .....+.. ..+. ...+..+++.++|+++++    |..             .+.|..||..+++.              
T Consensus       116 g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~--------------  181 (305)
T 3dr2_A          116 GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL--------------  181 (305)
T ss_dssp             SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC--------------
T ss_pred             CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE--------------
Confidence            22222211 1111 234678999999998876    332             24566666544221              


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEECC------CeEEEEecccCcee--EEEE--CCeeeEEE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWD------HTLKIWDAELGGMK--SEIV--GNKSFFDV  321 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d------g~i~iwd~~~~~~~--~~~~--~~~~i~~~  321 (391)
                                     . .+. .......++|++++. |+.+...      +.|.+|++..+...  ..+.  .......+
T Consensus       182 ---------------~-~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi  244 (305)
T 3dr2_A          182 ---------------Q-RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGF  244 (305)
T ss_dssp             ---------------E-EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSE
T ss_pred             ---------------E-EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeE
Confidence                           1 111 233456789997764 6666554      78999998765411  1111  12234568


Q ss_pred             EECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         322 HYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +++++|++.++ +.+ .|.+|+.. ++   ....+..+. .+.+++|+|+ +..|..++.++ +..++
T Consensus       245 ~~d~~G~lwv~-~~~-gv~~~~~~-g~---~~~~~~~~~-~~~~~~f~~d-~~~L~it~~~~-l~~~~  303 (305)
T 3dr2_A          245 CVDRGGWLWSS-SGT-GVCVFDSD-GQ---LLGHIPTPG-TASNCTFDQA-QQRLFITGGPC-LWMLP  303 (305)
T ss_dssp             EECTTSCEEEC-CSS-EEEEECTT-SC---EEEEEECSS-CCCEEEECTT-SCEEEEEETTE-EEEEE
T ss_pred             EECCCCCEEEe-cCC-cEEEECCC-CC---EEEEEECCC-ceeEEEEeCC-CCEEEEEcCCe-EEEEE
Confidence            89999995544 444 49999974 33   334444343 5889999984 44455555554 43334

>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*

Probab=99.27  E-value=3.7e-09  Score=97.39  Aligned_cols=189  Identities=12%  Similarity=0.068  Sum_probs=133.4

Q ss_pred             CCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         168 GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       168 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                      +.+.++++...+++|.++|..    +.+.+..+.. ...+..+.|+|+++++++++.|+.|.+||+....          
T Consensus       165 ~~~~~~V~~~~~~~V~viD~~----t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t----------  229 (567)
T 1qks_A          165 LENLFSVTLRDAGQIALIDGS----TYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE----------  229 (567)
T ss_dssp             GGGEEEEEETTTTEEEEEETT----TCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS----------
T ss_pred             CCceEEEEeCCCCeEEEEECC----CCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCC----------
Confidence            455677888889999999943    3345555553 3457799999999999999999999999995111          


Q ss_pred             CCccccccccccccCCCCCceeeecCccCcccEEEec----cCC-eEEEEE-CCCeEEEEecccCceeEEEECCe-----
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT----AVD-EIITSS-WDHTLKIWDAELGGMKSEIVGNK-----  316 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~-~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~-----  316 (391)
                                       .+.+..+.... ....++|+    |++ ++++++ .++.+.++|..+.+.+..+....     
T Consensus       230 -----------------~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~  291 (567)
T 1qks_A          230 -----------------PTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDE  291 (567)
T ss_dssp             -----------------CCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTT
T ss_pred             -----------------CcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEecccccccc
Confidence                             23444454322 34688999    455 555554 56999999999999988876432     


Q ss_pred             -------eeEEEEECCCCCE-EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         317 -------SFFDVHYSPLSKL-VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       317 -------~i~~~~~~p~~~~-l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                             .+..+..++++.. ++....+|.|.++|....+... +..+ ........+.|+|++.++++++..++.|.++
T Consensus       292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~-v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~Vi  369 (567)
T 1qks_A          292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVI  369 (567)
T ss_dssp             CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE-EEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEE
T ss_pred             ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccce-eeee-eccccccCceECCCCCEEEEEeCCCCeEEEE
Confidence                   4667888888664 4455567999999987654222 2222 2344577899999666666666678899999


Q ss_pred             ecC
Q psy2107         389 DLR  391 (391)
Q Consensus       389 dlr  391 (391)
                      |++
T Consensus       370 D~~  372 (567)
T 1qks_A          370 DTK  372 (567)
T ss_dssp             ETT
T ss_pred             ECC
Confidence            974

>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}

Probab=99.26  E-value=3e-09  Score=94.42  Aligned_cols=194  Identities=12%  Similarity=0.133  Sum_probs=129.2

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEEC
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC--LLKIWSA  233 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~  233 (391)
                      .....|+|   ++++.++++...++.|++||..  ...  ....... ..... ++|+++++.|+++..++  .|.+|+.
T Consensus       131 ~~P~~la~---d~~g~lyv~d~~~~~I~~id~~--~g~--~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~  201 (409)
T 3hrp_A          131 KYMWGIAA---VGNNTVLAYQRDDPRVRLISVD--DNK--VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK  201 (409)
T ss_dssp             CCEEEEEE---CSTTEEEEEETTTTEEEEEETT--TTE--EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred             CCceEEEE---eCCCCEEEEecCCCcEEEEECC--CCE--EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence            35678888   7788888888888999999943  322  2222232 23334 99999999999888866  6888887


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEecc-CCeEEEEECCCeEEEEecccCceeEE
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTA-VDEIITSSWDHTLKIWDAELGGMKSE  311 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~  311 (391)
                      ..+...                          ..+..+.. ....+.++++++ ++.|+.+..++.|+.||..++.....
T Consensus       202 ~~~~~~--------------------------~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~  255 (409)
T 3hrp_A          202 ASGWAP--------------------------TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI  255 (409)
T ss_dssp             GGTTCE--------------------------EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred             CCCcee--------------------------EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence            542210                          00101111 345677899997 78888888889999999987764322


Q ss_pred             ----EECCeee--E-EEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc---------------cCcEEEEEE
Q psy2107         312 ----IVGNKSF--F-DVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFSSH---------------KEWVQSVRW  368 (391)
Q Consensus       312 ----~~~~~~i--~-~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h---------------~~~v~~~~~  368 (391)
                          .......  . .++|+|+ +.++++-..++.|+.|+....     ...+.++               -.....+++
T Consensus       256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~  330 (409)
T 3hrp_A          256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTV  330 (409)
T ss_dssp             EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEE
T ss_pred             ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEE
Confidence                1111112  2 8999995 566666667889999997542     1122222               245899999


Q ss_pred             CCCCCCEEEEee-CCCcEEEEec
Q psy2107         369 SPIDPQLFVSAS-FDNSVKLWDL  390 (391)
Q Consensus       369 ~~~~~~~l~s~~-~dg~v~iwdl  390 (391)
                      +| ++.++++-. .++.|+.||+
T Consensus       331 d~-dG~lyvad~~~~~~I~~~~~  352 (409)
T 3hrp_A          331 DE-DGNFYIVDGFKGYCLRKLDI  352 (409)
T ss_dssp             CT-TCCEEEEETTTTCEEEEEET
T ss_pred             eC-CCCEEEEeCCCCCEEEEEEC
Confidence            99 556788877 8899999984

>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}

Probab=99.25  E-value=1.3e-09  Score=104.82  Aligned_cols=199  Identities=11%  Similarity=0.080  Sum_probs=125.2

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL-  227 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-  227 (391)
                      |...+..++|   +|++++|+.++.+     ..|++||+.  ++..... ..  +...+..++|+|+ +.|+.++.++. 
T Consensus       161 ~~~~~~~~~~---SPDG~~la~~~~~~G~e~~~i~v~dl~--tg~~~~~-~~--~~~~~~~~~wspD-~~l~~~~~~~~~  231 (741)
T 1yr2_A          161 GATALDAWAA---SDDGRLLAYSVQDGGSDWRTVKFVGVA--DGKPLAD-EL--KWVKFSGLAWLGN-DALLYSRFAEPK  231 (741)
T ss_dssp             --EEEEEEEE---CTTSSEEEEEEEETTCSEEEEEEEETT--TCCEEEE-EE--EEEESCCCEESTT-SEEEEEECCCC-
T ss_pred             CCEEEEeEEE---CCCCCEEEEEEcCCCCceEEEEEEECC--CCCCCCc-cC--CCceeccEEEECC-CEEEEEEecCcc
Confidence            3346788999   7889988877654     359999965  3332211 11  1122357899999 98988887654 


Q ss_pred             -------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEEE
Q psy2107         228 -------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSS  293 (391)
Q Consensus       228 -------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~~  293 (391)
                                   |++|++.++...                         ...+.....+...+..+.|++++. |+..+
T Consensus       232 ~~~~~~~~~~~~~v~~~~lgt~~~~-------------------------~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~  286 (741)
T 1yr2_A          232 EGQAFQALNYNQTVWLHRLGTPQSA-------------------------DQPVFATPELPKRGHGASVSSDGRWVVITS  286 (741)
T ss_dssp             -------CCCCCEEEEEETTSCGGG-------------------------CEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred             cccccccCCCCCEEEEEECCCCchh-------------------------CEEEeccCCCCeEEEEEEECCCCCEEEEEE
Confidence                         888888653310                         011222223334578899997764 66555


Q ss_pred             CC-----CeEEEEecccC--ceeEEEECC-eeeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEEEeccccC
Q psy2107         294 WD-----HTLKIWDAELG--GMKSEIVGN-KSFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKSTFSSHKE  361 (391)
Q Consensus       294 ~d-----g~i~iwd~~~~--~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~~~~h~~  361 (391)
                      .+     ..|++||+.++  .....+..+ ...... ++|+|+.|+..+.+    +.|.+||+.... ......+..+..
T Consensus       287 ~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~  364 (741)
T 1yr2_A          287 SEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKD  364 (741)
T ss_dssp             ECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSS
T ss_pred             EccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCC
Confidence            43     38999999877  413444433 333333 34889988877653    459999987632 123334455556


Q ss_pred             cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         362 WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+..++|+  ++.++++...|+..+||.+
T Consensus       365 ~l~~~~~~--~~~lv~~~~~dg~~~l~~~  391 (741)
T 1yr2_A          365 NLESVGIA--GNRLFASYIHDAKSQVLAF  391 (741)
T ss_dssp             EEEEEEEE--BTEEEEEEEETTEEEEEEE
T ss_pred             eEEEEEEE--CCEEEEEEEECCEEEEEEE
Confidence            67778887  5568899999998888753

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=99.25  E-value=7.5e-10  Score=95.89  Aligned_cols=254  Identities=9%  Similarity=0.017  Sum_probs=152.1

Q ss_pred             cCCEEEEEEC-----CCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeec
Q psy2107         125 HNDWILTGCY-----DHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWK  188 (391)
Q Consensus       125 ~~~~l~t~~~-----dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~  188 (391)
                      +++.+++...     ++.|.+.|.. .+.+..+..-..+ . +++   ++++++++.+.          .++.|.+||..
T Consensus        43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~---spDG~~lyVan~~~~r~~~G~~~~~VsviD~~  117 (386)
T 3sjl_D           43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVV---ADDGSFIAHASTVFSRIARGERTDYVEVFDPV  117 (386)
T ss_dssp             CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred             CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEE---CCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence            3555555544     6799999995 4555566544444 3 888   77888776665          36789999954


Q ss_pred             CCCCceeEEEEEecC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCC----------
Q psy2107         189 VESNSIECIHVCRGH-------ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEG----------  249 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~----------  249 (391)
                          ..+.+..+.-.       ......++++|+|++++++..  ++.|.++|+.+.+........+...          
T Consensus       118 ----t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~  193 (386)
T 3sjl_D          118 ----TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFF  193 (386)
T ss_dssp             ----TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEE
T ss_pred             ----CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeE
Confidence                33444444321       124567999999999988864  6899999999887654432211100          


Q ss_pred             ccccccccccccCCC-CCceeeecCc----cCccc-EEEec-cCCeEEEEECCCeEEEEecccCc--eeEEEEC------
Q psy2107         250 TTSKKRKKEYSSASS-RTPLITLKGH----KEAIS-AVQWT-AVDEIITSSWDHTLKIWDAELGG--MKSEIVG------  314 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~v~-~~~~~-~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~------  314 (391)
                      ..+......+..... .+.......+    ..++. ...|. +++.++..+.+|.|.+.|+..+.  ....+..      
T Consensus       194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~  273 (386)
T 3sjl_D          194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAER  273 (386)
T ss_dssp             EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHH
T ss_pred             EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccc
Confidence            000000111111111 1221111111    11221 24554 67777668889999999997654  3333320      


Q ss_pred             -----CeeeEEEEECCCCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE-EE
Q psy2107         315 -----NKSFFDVHYSPLSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF-VS  378 (391)
Q Consensus       315 -----~~~i~~~~~~p~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l-~s  378 (391)
                           ......++++|+++.+.....          .+.|.++|+.+.+   .+..+.- ...+.+|++++++..+| ++
T Consensus       274 ~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~~~i~v-g~~~~~lavs~D~~~~ly~t  349 (386)
T 3sjl_D          274 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFEM-GHEIDSINVSQDEKPLLYAL  349 (386)
T ss_dssp             HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEE-EEEECEEEECSSSSCEEEEE
T ss_pred             cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EEEEEEC-CCCcceEEECCCCCeEEEEE
Confidence                 112345777899887776542          2579999998876   5555442 23688999999665344 44


Q ss_pred             eeCCCcEEEEecC
Q psy2107         379 ASFDNSVKLWDLR  391 (391)
Q Consensus       379 ~~~dg~v~iwdlr  391 (391)
                      ...++.|.++|..
T Consensus       350 n~~~~~VsViD~~  362 (386)
T 3sjl_D          350 STGDKTLYIHDAE  362 (386)
T ss_dssp             ETTTTEEEEEETT
T ss_pred             cCCCCeEEEEECC
Confidence            5668999999963

>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...

Probab=99.19  E-value=5.2e-09  Score=89.52  Aligned_cols=198  Identities=8%  Similarity=0.083  Sum_probs=128.9

Q ss_pred             CCCcEEEEEecC--CEEEEEECCCeEEEEcCCCceEEec-cC-----CCCCeeEEEEEecCCCCeEEEEEeCC-------
Q psy2107         115 HDDWVSAIDFHN--DWILTGCYDHSVHIWTRRGEHKLNI-PG-----HGGPVKGVAWLYNDGKDAAFISVSTD-------  179 (391)
Q Consensus       115 h~~~V~~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~~~-~~-----~~~~v~~l~~~~~~~~~~~l~s~~~d-------  179 (391)
                      +...+.++++++  ..+..++..+.|.+||.+ .....+ ..     ....+.++++   ++++.+.++...+       
T Consensus        69 ~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~---d~~g~l~v~~~~~~~~~~~~  144 (314)
T 1pjx_A           69 YGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAF---DYEGNLWITAPAGEVAPADY  144 (314)
T ss_dssp             EECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEE---CTTSCEEEEECBCBCTTSCC
T ss_pred             CCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEE---CCCCCEEEEecCcccccccc
Confidence            445688999973  466666666689999988 444433 21     1235789999   7788877766554       


Q ss_pred             --------CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc----CCCCEEEEE-eCCCcEEEEECC-CCCCCCCCCCC
Q psy2107         180 --------QTAMIWEWKVESNSIECIHVCRGHERGLETVTVS----ESRQQFATG-GWDCLLKIWSAD-ISKERGDPSEN  245 (391)
Q Consensus       180 --------g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~sg-~~dg~i~iwd~~-~~~~~~~~~~~  245 (391)
                              +.|..|+  .. .....   +..+......++++    |+++.++.+ ..++.|.+||.+ .++..      
T Consensus       145 ~~~~~~~~~~l~~~~--~~-g~~~~---~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~------  212 (314)
T 1pjx_A          145 TRSMQEKFGSIYCFT--TD-GQMIQ---VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE------  212 (314)
T ss_dssp             CBTTSSSCEEEEEEC--TT-SCEEE---EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE------
T ss_pred             cccccCCCCeEEEEC--CC-CCEEE---eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc------
Confidence                    4555555  32 22222   22233456889999    999765554 567899999975 21110      


Q ss_pred             CCCCccccccccccccCCCCCceeeecCcc-CcccEEEeccCCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEE
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHK-EAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVH  322 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~  322 (391)
                                        .......+..+. ..+..+++++++.++.+ ..++.|.+||..+++....+..+ ..+.+++
T Consensus       213 ------------------~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~  274 (314)
T 1pjx_A          213 ------------------NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH  274 (314)
T ss_dssp             ------------------EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred             ------------------cceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence                              001122233333 45678899977765555 46889999999878877777665 5788999


Q ss_pred             ECCCCCEEE-EeeCCCcEEEEcCCC
Q psy2107         323 YSPLSKLVI-TASADKQIRLYDPKV  346 (391)
Q Consensus       323 ~~p~~~~l~-~g~~dg~i~iwd~~~  346 (391)
                      ++|+++.|. +...++.|..|++..
T Consensus       275 ~~~dg~~l~v~~~~~~~l~~~~~~~  299 (314)
T 1pjx_A          275 FKPQTKTIFVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             ECTTSSEEEEEETTTTEEEEEECSS
T ss_pred             ECCCCCEEEEEeCCCCeEEEEeCCC
Confidence            999999554 445567899999764

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.17  E-value=2.2e-11  Score=106.85  Aligned_cols=200  Identities=12%  Similarity=0.068  Sum_probs=111.0

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      +..++.+++++.||.|+.||. +++.+.++..  +.+.+..+   ..++..+++++.||.|+.||.....    .+..+.
T Consensus         6 ~v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~---~~~g~~~v~~s~dg~l~a~d~~tG~----~~w~~~   76 (369)
T 2hz6_A            6 TLPETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPT---HVEEPAFLPDPNDGSLYTLGSKNNE----GLTKLP   76 (369)
T ss_dssp             --CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC--------CCEEECTTTCCEEEC-----C----CSEECS
T ss_pred             eeeCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecce---EcCCCEEEEeCCCCEEEEEECCCCc----eeeeee
Confidence            346889999999999999998 6777777665  44554444   3356677888899999999964222    222222


Q ss_pred             cCCC-CeE-EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCccc
Q psy2107         202 GHER-GLE-TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS  279 (391)
Q Consensus       202 ~~~~-~v~-~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  279 (391)
                      .+.. .+. +..+. .+..+++|+.|+.|+.||.++++...                             .+..+..   
T Consensus        77 ~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w-----------------------------~~~~~~~---  123 (369)
T 2hz6_A           77 FTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQ-----------------------------TLSSAFA---  123 (369)
T ss_dssp             CCHHHHHTTCSCC------CCCCEEEEEEEEECCC---------------------------------------------
T ss_pred             ccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEE-----------------------------EecCCCc---
Confidence            2211 010 00111 34467888899999999998866532                             1111110   


Q ss_pred             EEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCC---CEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107         280 AVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLS---KLVITASADKQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       280 ~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~  355 (391)
                       ..++ .++.+++++.|+.|+.||.++|+.+..+.... ....++.++.   ..+++++.+|.|+.||.++++   .+..
T Consensus       124 -~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~---~~W~  198 (369)
T 2hz6_A          124 -DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD---VLWI  198 (369)
T ss_dssp             ----------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC---EEEE
T ss_pred             -ccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCc---EEEE
Confidence             1122 45678899999999999999999877665322 2223344432   567778889999999998876   4444


Q ss_pred             eccccCcEEE-EEECC
Q psy2107         356 FSSHKEWVQS-VRWSP  370 (391)
Q Consensus       356 ~~~h~~~v~~-~~~~~  370 (391)
                      .. ...++.. ..+++
T Consensus       199 ~~-~~~pv~~~~~~~~  213 (369)
T 2hz6_A          199 QN-YASPVVAFYVWQR  213 (369)
T ss_dssp             EE-CSSCEEEEEECTT
T ss_pred             ec-CCCceEEEEEecC
Confidence            43 3344443 34444

>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}

Probab=99.12  E-value=1.7e-11  Score=107.45  Aligned_cols=180  Identities=11%  Similarity=0.020  Sum_probs=92.9

Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ++..+++++.||.|..||..    +.+.+..+..  +.+.+..+..++..+++++.||.|+.||..+++...        
T Consensus         8 ~~~~v~~gs~dg~v~a~d~~----tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w--------   73 (369)
T 2hz6_A            8 PETLLFVSTLDGSLHAVSKR----TGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT--------   73 (369)
T ss_dssp             CTTEEEEEETTSEEEEEETT----TCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE--------
T ss_pred             eCCEEEEEcCCCEEEEEECC----CCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee--------
Confidence            46688999999999999954    3345555554  455555566677778888899999999997755421        


Q ss_pred             CccccccccccccCCCCCceeeecCcc-Cccc-EEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCC
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHK-EAIS-AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL  326 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~-~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~  326 (391)
                                           .+..+. ..+. +..+..++.+++++.|+.++.||.++|+.+..+..+..   ..++|+
T Consensus        74 ---------------------~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~  129 (369)
T 2hz6_A           74 ---------------------KLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPS  129 (369)
T ss_dssp             ---------------------ECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------
T ss_pred             ---------------------eeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---cccccc
Confidence                                 111110 0010 11112346788888999999999999999887766542   345678


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                      +..+++++.|+.|+.||.++++   .+..+..+.  ....++.++.  ...++.++.||.|+.||.+
T Consensus       130 ~~~v~~~~~dg~v~a~d~~tG~---~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~  191 (369)
T 2hz6_A          130 TSLLYLGRTEYTITMYDTKTRE---LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE  191 (369)
T ss_dssp             ---EEEEEEEEEEECCCSSSSS---CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTT
T ss_pred             CCEEEEEecCCEEEEEECCCCC---EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECC
Confidence            8899999999999999998765   222221111  1222333311  0346678889999999863

>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B

Probab=99.11  E-value=2.4e-07  Score=78.50  Aligned_cols=199  Identities=9%  Similarity=0.035  Sum_probs=124.7

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA  233 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~  233 (391)
                      ...-..+..|.|.  ++.++++...++.|..||..  ....   ..+. ....+.+++++++++++++ . ++.|.+||.
T Consensus        11 ~~~~~Egp~w~~~--~~~l~~~d~~~~~i~~~d~~--~~~~---~~~~-~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~   80 (297)
T 3g4e_A           11 NCRCGESPVWEEV--SNSLLFVDIPAKKVCRWDSF--TKQV---QRVT-MDAPVSSVALRQSGGYVAT-I-GTKFCALNW   80 (297)
T ss_dssp             CCSBEEEEEEETT--TTEEEEEETTTTEEEEEETT--TCCE---EEEE-CSSCEEEEEEBTTSSEEEE-E-TTEEEEEET
T ss_pred             CCccccCCeEECC--CCEEEEEECCCCEEEEEECC--CCcE---EEEe-CCCceEEEEECCCCCEEEE-E-CCeEEEEEC
Confidence            3344567888542  56677887888999999954  3222   2222 3567999999999995554 4 567999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccCCeEEEEECC----------CeEEEE
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAVDEIITSSWD----------HTLKIW  301 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d----------g~i~iw  301 (391)
                      ++++..                           .+....  .....+..+++++++.++.++..          ..-.+|
T Consensus        81 ~~g~~~---------------------------~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~  133 (297)
T 3g4e_A           81 KEQSAV---------------------------VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALY  133 (297)
T ss_dssp             TTTEEE---------------------------EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEE
T ss_pred             CCCcEE---------------------------EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEE
Confidence            763321                           111111  11234678899987877666521          233455


Q ss_pred             eccc-CceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCC--CCCc--ceEEEEeccccCcEEEEEECCCCCCE
Q psy2107         302 DAEL-GGMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPK--VKEG--AIVKSTFSSHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       302 d~~~-~~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~--~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~  375 (391)
                      .+.. ++.............++|+|+++.|+ +.+.++.|.+|++.  ++..  ......+..+...+..+++++ ++++
T Consensus       134 ~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~-~G~l  212 (297)
T 3g4e_A          134 SLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDA-EGKL  212 (297)
T ss_dssp             EECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBT-TSCE
T ss_pred             EEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECC-CCCE
Confidence            4432 33333333223567899999998664 55567899999874  3321  112233344456789999999 5577


Q ss_pred             EEEeeCCCcEEEEec
Q psy2107         376 FVSASFDNSVKLWDL  390 (391)
Q Consensus       376 l~s~~~dg~v~iwdl  390 (391)
                      .++...++.|.+||.
T Consensus       213 wva~~~~~~v~~~d~  227 (297)
T 3g4e_A          213 WVACYNGGRVIRLDP  227 (297)
T ss_dssp             EEEEETTTEEEEECT
T ss_pred             EEEEcCCCEEEEEcC
Confidence            787777888999985

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=99.10  E-value=3.8e-09  Score=93.16  Aligned_cols=243  Identities=7%  Similarity=-0.016  Sum_probs=141.5

Q ss_pred             CeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCCceeEEEEEecC-
Q psy2107         136 HSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESNSIECIHVCRGH-  203 (391)
Q Consensus       136 g~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~~~~~~~~~~~~-  203 (391)
                      +.|.++|.. .+.+..+..-..+  .+.+   +++++.++.+.          .++.|.++|..    ..+.+..+.-. 
T Consensus        99 ~~VsVID~~t~~vv~~I~vG~~P--gia~---SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~----t~~vv~~I~v~g  169 (426)
T 3c75_H           99 TQQFVIDGSTGRILGMTDGGFLP--HPVA---AEDGSFFAQASTVFERIARGKRTDYVEVFDPV----TFLPIADIELPD  169 (426)
T ss_dssp             EEEEEEETTTTEEEEEEEECSSC--EEEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECTT----TCCEEEEEEETT
T ss_pred             CeEEEEECCCCEEEEEEECCCCC--ceEE---CCCCCEEEEEeccccccccCCCCCEEEEEECC----CCcEEEEEECCC
Confidence            699999994 4555555543444  7899   77888777665          46789999944    33444444311 


Q ss_pred             ------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccc-c---------ccccccccCCCC
Q psy2107         204 ------ERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTS-K---------KRKKEYSSASSR  265 (391)
Q Consensus       204 ------~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~  265 (391)
                            ......++++|++++++++..  ++.|.+.|+.+.+............... .         .....+......
T Consensus       170 ~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~  249 (426)
T 3c75_H          170 APRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADG  249 (426)
T ss_dssp             CCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTT
T ss_pred             ccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCC
Confidence                  123567899999999998874  5789999999877644322211000000 0         000000011111


Q ss_pred             Ccee----eecCccCcc-cEEEecc-CCeEEEEECCCeEEEEecccCcee--EEEECC-----------eeeEEEEECCC
Q psy2107         266 TPLI----TLKGHKEAI-SAVQWTA-VDEIITSSWDHTLKIWDAELGGMK--SEIVGN-----------KSFFDVHYSPL  326 (391)
Q Consensus       266 ~~~~----~~~~~~~~v-~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~-----------~~i~~~~~~p~  326 (391)
                      +...    .+.....++ ..+.+.+ ++.++..+..+.+.+.|+......  ..+...           .....++++|+
T Consensus       250 ~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~d  329 (426)
T 3c75_H          250 ETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQ  329 (426)
T ss_dssp             CCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGG
T ss_pred             cEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCC
Confidence            1110    011011111 1234553 345666677889999998654422  111110           11223689999


Q ss_pred             CCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-CCCcEEEEecC
Q psy2107         327 SKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-FDNSVKLWDLR  391 (391)
Q Consensus       327 ~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-~dg~v~iwdlr  391 (391)
                      ++.+++...          ++.|.++|+.+.+   .+..+..- ....+++|+|++..+++++. .++.|.|+|+.
T Consensus       330 g~rlyVa~~~~~~gthk~~s~~VsVID~~T~k---vv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~  401 (426)
T 3c75_H          330 SDRIYLLVDQRDEWKHKAASRFVVVLNAETGE---RINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAA  401 (426)
T ss_dssp             GTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred             CCEEEEEecccccccccCCCCEEEEEECCCCe---EEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence            887666532          3579999998877   55555422 24889999996552666666 69999999974

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=99.09  E-value=3.4e-08  Score=85.01  Aligned_cols=216  Identities=9%  Similarity=-0.041  Sum_probs=144.0

Q ss_pred             cCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC
Q psy2107         125 HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE  204 (391)
Q Consensus       125 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~  204 (391)
                      .+..+..++.++.|..+|..+............+.++..   .+++. +..++.++.|..+|..     ......+....
T Consensus       106 ~~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~---~~~g~-l~vgt~~~~l~~~d~~-----g~~~~~~~~~~  176 (330)
T 3hxj_A          106 FEDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIV---SEDGT-IYVGSNDNYLYAINPD-----GTEKWRFKTND  176 (330)
T ss_dssp             ETTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEE---CTTSC-EEEECTTSEEEEECTT-----SCEEEEEECSS
T ss_pred             ECCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEE---cCCCE-EEEEcCCCEEEEECCC-----CCEeEEEecCC
Confidence            377888899999999999886666655555555666666   44554 6667788999999832     23344444455


Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      ..+.++...+++.+++ ++  +.|..+| .+++                             ...........+.++...
T Consensus       177 ~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~-----------------------------~~~~~~~~~~~~~~~~~~  223 (330)
T 3hxj_A          177 AITSAASIGKDGTIYF-GS--DKVYAIN-PDGT-----------------------------EKWNFYAGYWTVTRPAIS  223 (330)
T ss_dssp             CCCSCCEECTTCCEEE-ES--SSEEEEC-TTSC-----------------------------EEEEECCSSCCCSCCEEC
T ss_pred             CceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCc-----------------------------EEEEEccCCcceeceEEC
Confidence            6677888878887544 44  7888898 4422                             222333334567788888


Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCee-eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKS-FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                      +++.++.++.++.+..+| .++..+..+..... +..+.+.+++ .|..++.+|.|..+|. +++   ....+......+
T Consensus       224 ~~g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g~---~~~~~~~~~~~~  297 (330)
T 3hxj_A          224 EDGTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DGT---EKWNFETGSWII  297 (330)
T ss_dssp             TTSCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TSC---EEEEEECSSCCC
T ss_pred             CCCeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CCc---EEEEEEcCCccc
Confidence            778899999999999997 45666666654442 3345555555 4556777888999995 333   333343345567


Q ss_pred             EEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .++...+ ++. |..++.+|.+++...
T Consensus       298 ~~~~~d~-~g~-l~~gt~~G~~~~~~~  322 (330)
T 3hxj_A          298 ATPVIDE-NGT-IYFGTRNGKFYALFN  322 (330)
T ss_dssp             SCCEECT-TCC-EEEECTTSCEEEEEC
T ss_pred             cceEEcC-CCE-EEEEcCCCeEEEEec
Confidence            7777766 555 566888999988654

>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}

Probab=99.08  E-value=1.8e-08  Score=85.83  Aligned_cols=205  Identities=11%  Similarity=0.044  Sum_probs=126.9

Q ss_pred             CceEEeccCCCCCeeEEEEEecCCCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         145 GEHKLNIPGHGGPVKGVAWLYNDGKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       145 ~~~~~~~~~~~~~v~~l~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      +..+..+...........|.   ++++ +++++..++.|..|+.   ...   ...+..+...+..++++++|+++++..
T Consensus        34 ~~~~~~l~~~~~~~egp~~~---~~g~~l~~~d~~~~~i~~~~~---~g~---~~~~~~~~~~~~gl~~d~dG~l~v~~~  104 (305)
T 3dr2_A           34 DARLLTLYDQATWSEGPAWW---EAQRTLVWSDLVGRRVLGWRE---DGT---VDVLLDATAFTNGNAVDAQQRLVHCEH  104 (305)
T ss_dssp             TCCCEEEECCCSSEEEEEEE---GGGTEEEEEETTTTEEEEEET---TSC---EEEEEESCSCEEEEEECTTSCEEEEET
T ss_pred             CCceEEEecCCcCccCCeEe---CCCCEEEEEECCCCEEEEEeC---CCC---EEEEeCCCCccceeeECCCCCEEEEEC
Confidence            33444455556667789994   4565 7777788899999983   222   233444567789999999999766665


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEEE-----EC---
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIITS-----SW---  294 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s~-----~~---  294 (391)
                      .++.|..|+.+ ++..                          .......+ ....+..+++.+++.++.+     ..   
T Consensus       105 ~~~~v~~~~~~-g~~~--------------------------~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~  157 (305)
T 3dr2_A          105 GRRAITRSDAD-GQAH--------------------------LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS  157 (305)
T ss_dssp             TTTEEEEECTT-SCEE--------------------------EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred             CCCEEEEECCC-CCEE--------------------------EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence            66789999874 2210                          00001111 1234677899987776663     21   


Q ss_pred             ----------CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC------CcEEEEcCCCCCcceEEEEe-c
Q psy2107         295 ----------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD------KQIRLYDPKVKEGAIVKSTF-S  357 (391)
Q Consensus       295 ----------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d------g~i~iwd~~~~~~~~~~~~~-~  357 (391)
                                .+.|..||..+++..... .......++|+|+++.|+.+...      +.|++|++.... ......+ .
T Consensus       158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~  235 (305)
T 3dr2_A          158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFAS  235 (305)
T ss_dssp             GSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEEC
T ss_pred             cccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEE
Confidence                      256888887777654433 22356789999999977776654      689999976432 1011111 1


Q ss_pred             cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       358 ~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .....+..+++++ ++++.++. .+ .|.+||.
T Consensus       236 ~~~~~pdgi~~d~-~G~lwv~~-~~-gv~~~~~  265 (305)
T 3dr2_A          236 VPDGLPDGFCVDR-GGWLWSSS-GT-GVCVFDS  265 (305)
T ss_dssp             CSSSCCCSEEECT-TSCEEECC-SS-EEEEECT
T ss_pred             CCCCCCCeEEECC-CCCEEEec-CC-cEEEECC
Confidence            1234456788998 55544444 44 4888874

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=99.06  E-value=1.9e-08  Score=87.27  Aligned_cols=245  Identities=10%  Similarity=-0.076  Sum_probs=142.1

Q ss_pred             EEEEEECCC----eEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe----------CCCcEEEEeecCCCC
Q psy2107         128 WILTGCYDH----SVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS----------TDQTAMIWEWKVESN  192 (391)
Q Consensus       128 ~l~t~~~dg----~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~----------~dg~v~iwd~~~~~~  192 (391)
                      .+++...++    +|.++|. +.+.+.++..-..+  .+.+   ++++++++.+.          .++.|.+||..    
T Consensus        34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~---spDg~~lyVan~~~~r~~~G~~~~~VsviD~~----  104 (368)
T 1mda_H           34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVA---GHSGSDFALASTSFARSAKGKRTDYVEVFDPV----  104 (368)
T ss_dssp             EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEE---CTTSSCEEEEEEEETTTTSSSEEEEEEEECTT----
T ss_pred             EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEE---CCCCCEEEEEcccccccccCCCCCEEEEEECC----
Confidence            344444444    8889999 45556666544445  6899   77888777775          37889999954    


Q ss_pred             ceeEEEEEecC-------CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EECCCCCCCCCCCCCCCCCcccccccc----
Q psy2107         193 SIECIHVCRGH-------ERGLETVTVSESRQQFATGGW--DCLLKI--WSADISKERGDPSENGDEGTTSKKRKK----  257 (391)
Q Consensus       193 ~~~~~~~~~~~-------~~~v~~l~~~~~~~~l~sg~~--dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~----  257 (391)
                      ..+.+..+...       ......++++|+|++++++..  +..+.+  +|..+-+...... . ...........    
T Consensus       105 T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~-~-~~~~p~g~~~~~~~~  182 (368)
T 1mda_H          105 TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS-C-FHIHPGAAATHYLGS  182 (368)
T ss_dssp             TCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSS-C-CCCEEEETTEEECCC
T ss_pred             CCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEEECCC-c-eEEccCCCeEEEEEc
Confidence            34455555432       124568999999999998874  467888  8886511110000 0 00000000000    


Q ss_pred             -----ccccCCC-----CCce----eeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc--eeEEEECC------
Q psy2107         258 -----EYSSASS-----RTPL----ITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG--MKSEIVGN------  315 (391)
Q Consensus       258 -----~~~~~~~-----~~~~----~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~------  315 (391)
                           ...+...     .+..    ..+.....+.   .+.+++.++..+. +.+.+.|+....  .+..+...      
T Consensus       183 ~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~  258 (368)
T 1mda_H          183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKA  258 (368)
T ss_dssp             CTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHH
T ss_pred             CCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccc
Confidence                 0000000     0000    0011111222   2445566666666 899999986543  22222110      


Q ss_pred             -----eeeEEEEECCCCCEEEEeeC---------CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEee-
Q psy2107         316 -----KSFFDVHYSPLSKLVITASA---------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS-  380 (391)
Q Consensus       316 -----~~i~~~~~~p~~~~l~~g~~---------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-  380 (391)
                           .....++++|+++.++++..         ++.+.++|+.+.+   .+..+.... ....++|+|++..++++.. 
T Consensus       259 ~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~---vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~  334 (368)
T 1mda_H          259 DNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ---TSGPISNGH-DSDAIIAAQDGASDNYANSA  334 (368)
T ss_dssp             TTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC---EEECCEEEE-EECEEEECCSSSCEEEEEET
T ss_pred             cccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe---EEEEEECCC-CcceEEECCCCCEEEEEccC
Confidence                 11122689999988776533         2356699998876   555554333 5899999997666888888 


Q ss_pred             CCCcEEEEecC
Q psy2107         381 FDNSVKLWDLR  391 (391)
Q Consensus       381 ~dg~v~iwdlr  391 (391)
                      .++.|.++|++
T Consensus       335 ~~~~VsVID~~  345 (368)
T 1mda_H          335 GTEVLDIYDAA  345 (368)
T ss_dssp             TTTEEEEEESS
T ss_pred             CCCeEEEEECC
Confidence            69999999974

>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1

Probab=99.04  E-value=1.3e-07  Score=81.30  Aligned_cols=193  Identities=8%  Similarity=-0.060  Sum_probs=119.9

Q ss_pred             eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      ..+..|.|.  .+.++++...++.|..||..  ....   ..+. ....+.+++++++++++++. .+ .|.+||..+++
T Consensus        51 ~egp~~~~~--~~~l~~~d~~~~~i~~~d~~--~~~~---~~~~-~~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~  120 (326)
T 2ghs_A           51 GEGPTFDPA--SGTAWWFNILERELHELHLA--SGRK---TVHA-LPFMGSALAKISDSKQLIAS-DD-GLFLRDTATGV  120 (326)
T ss_dssp             EEEEEEETT--TTEEEEEEGGGTEEEEEETT--TTEE---EEEE-CSSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCC
T ss_pred             CcCCeEeCC--CCEEEEEECCCCEEEEEECC--CCcE---EEEE-CCCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCc
Confidence            456788442  35677777788999999843  3222   2222 34679999999999866654 44 49999986643


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccCCeEEEEECC-------CeEEEEecccCce
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAVDEIITSSWD-------HTLKIWDAELGGM  308 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~~  308 (391)
                      ..                           .+....  .....+..+.+++++.++.++.+       +.|..++  +++.
T Consensus       121 ~~---------------------------~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~  171 (326)
T 2ghs_A          121 LT---------------------------LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV  171 (326)
T ss_dssp             EE---------------------------EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE
T ss_pred             EE---------------------------EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE
Confidence            21                           011110  11235778999987776666532       4555555  4544


Q ss_pred             eEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCC--CC-C--cceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         309 KSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPK--VK-E--GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       309 ~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~--~~-~--~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      ............++|+|+++.++.+ +.++.|.+|++.  ++ .  .......+......+..+++++ ++.+.++...+
T Consensus       172 ~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~-~G~lwva~~~~  250 (326)
T 2ghs_A          172 TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGE  250 (326)
T ss_dssp             EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETT
T ss_pred             EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC-CCCEEEEEeCC
Confidence            3322222345689999999876544 457899999975  33 2  1122233333445678999998 55667766667


Q ss_pred             CcEEEEec
Q psy2107         383 NSVKLWDL  390 (391)
Q Consensus       383 g~v~iwdl  390 (391)
                      +.|.+||.
T Consensus       251 ~~v~~~d~  258 (326)
T 2ghs_A          251 GAVDRYDT  258 (326)
T ss_dssp             TEEEEECT
T ss_pred             CEEEEECC
Confidence            88998874

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=99.03  E-value=1.7e-07  Score=81.24  Aligned_cols=254  Identities=9%  Similarity=0.020  Sum_probs=138.9

Q ss_pred             CcEEEEEec--CCEEEEEE--CCCeEEEEcCCCceEEecc-------CCCCCeeEEEEEecCCCCeEEEEEeC-----CC
Q psy2107         117 DWVSAIDFH--NDWILTGC--YDHSVHIWTRRGEHKLNIP-------GHGGPVKGVAWLYNDGKDAAFISVST-----DQ  180 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~t~~--~dg~i~iwd~~~~~~~~~~-------~~~~~v~~l~~~~~~~~~~~l~s~~~-----dg  180 (391)
                      .....++++  |+++++..  .++.++||.++...+..+.       .+-..+..+++   ++++.++++-..     ++
T Consensus        17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~---d~~g~L~v~D~g~~~~~~~   93 (343)
T 2qe8_A           17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKS---DGNGIVWMLDNGNQSKSVP   93 (343)
T ss_dssp             SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEE---CSSSEEEEEECHHHHTSCC
T ss_pred             CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEE---cCCCcEEEEcCCCCcCCCC
Confidence            467788887  56777753  2343455544233333332       34567899999   777776665443     57


Q ss_pred             cEEEEeecCCCCceeEEEEEec------CCCCeEEEEEcCCCCEE-EEEe---CCCcEEEEECCCCCCCCCCCC--CCCC
Q psy2107         181 TAMIWEWKVESNSIECIHVCRG------HERGLETVTVSESRQQF-ATGG---WDCLLKIWSADISKERGDPSE--NGDE  248 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l-~sg~---~dg~i~iwd~~~~~~~~~~~~--~~~~  248 (391)
                      .|.+||+.  +.  +.+..+..      +...+..+++++++..+ ++..   .++.|.+||+.+++.......  ....
T Consensus        94 ~i~~~d~~--tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~  169 (343)
T 2qe8_A           94 KLVAWDTL--NN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAP  169 (343)
T ss_dssp             EEEEEETT--TT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSC
T ss_pred             eEEEEECC--CC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccc
Confidence            89999954  22  33333332      22356899999865444 5544   578999999986553221100  0000


Q ss_pred             C-ccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC-eEEEEecc---cCc--------eeEEEEC
Q psy2107         249 G-TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH-TLKIWDAE---LGG--------MKSEIVG  314 (391)
Q Consensus       249 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg-~i~iwd~~---~~~--------~~~~~~~  314 (391)
                      . .........+..........   .....+..++|++++ .|+.+..++ .+..++..   .+.        .+.....
T Consensus       170 ~~~~~~~~g~~~~~~~~~g~~~---~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~  246 (343)
T 2qe8_A          170 EDIDLVIDGVPVQIGQPDGTVI---RPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE  246 (343)
T ss_dssp             CSCCCEETTEECBEECTTSCEE---CCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred             cccceeECCEEEEeccCCCcee---ceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence            0 00000000000000000000   011245789999776 477776655 45444432   111        0111111


Q ss_pred             CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cccCcEEEEEECCCCCCEEEEeeCCCc
Q psy2107         315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSASFDNS  384 (391)
Q Consensus       315 ~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~  384 (391)
                      ......++++++|.++++...++.|.+||...++   ...... .+...+.+++|.+ ++.++++.+..+.
T Consensus       247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~---~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~  313 (343)
T 2qe8_A          247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA---YKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHH  313 (343)
T ss_dssp             CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE---EEEEEECGGGSCEEEEEECT-TSCEEEEECCGGG
T ss_pred             CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC---EEEEEECCceecCCeeEECC-CCcEEEEeCcccc
Confidence            2245578999999999998889999999984433   221221 2345689999999 5667777664433

>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...

Probab=98.96  E-value=9.8e-07  Score=76.50  Aligned_cols=234  Identities=10%  Similarity=-0.011  Sum_probs=134.8

Q ss_pred             EEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--C
Q psy2107         122 IDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST--D  179 (391)
Q Consensus       122 ~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~--d  179 (391)
                      ++++  +++++++.          .++.|.+||.. .+.+..+.-.       ...-..+.|   ++++++++.+..  +
T Consensus        83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~---spDGk~lyVan~~~~  159 (386)
T 3sjl_D           83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL---TPDGKTLLFYQFSPA  159 (386)
T ss_dssp             EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEE---CTTSSEEEEEECSSS
T ss_pred             EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEE---cCCCCEEEEEEcCCC
Confidence            6666  66665554          36789999994 4444444311       124567889   888998887764  6


Q ss_pred             CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CCCCC----CCCCCCCCCcc-c-
Q psy2107         180 QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI-SKERG----DPSENGDEGTT-S-  252 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~----~~~~~~~~~~~-~-  252 (391)
                      +.|.++|..    ..+.+..+....  . ...+....+.+++.+.||.+.+.++.. ++...    ........... . 
T Consensus       160 ~~VsVID~~----t~~vv~tI~v~g--~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~  232 (386)
T 3sjl_D          160 PAVGVVDLE----GKAFKRMLDVPD--C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPA  232 (386)
T ss_dssp             CEEEEEETT----TTEEEEEEECCS--E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCE
T ss_pred             CeEEEEECC----CCcEEEEEECCC--c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccce
Confidence            899999954    335555554211  1 122322445666777788888888765 33310    00000000000 0 


Q ss_pred             --cccccccccCCCCCceeeecC-----------------------ccCcccEEEec-cCCeEEEEEC----------CC
Q psy2107         253 --KKRKKEYSSASSRTPLITLKG-----------------------HKEAISAVQWT-AVDEIITSSW----------DH  296 (391)
Q Consensus       253 --~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~~~-~~~~l~s~~~----------dg  296 (391)
                        ......++..... .+..+..                       .......++++ +.++++....          ..
T Consensus       233 ~~~~dG~~~~vs~~g-~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~  311 (386)
T 3sjl_D          233 YSQKAGRLVWPTYTG-KIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR  311 (386)
T ss_dssp             EETTTTEEEEEBTTS-EEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred             eEcCCCcEEEEeCCC-EEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence              0011111111100 1111110                       01223446667 3456666543          25


Q ss_pred             eEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      .|.+.|+.+++.+..+.....+..++++++++ +|+++ ..++.|.++|..+++   .+..+..- +..+.|.+++
T Consensus       312 ~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k---~~~~i~~~-~~p~~l~~s~  383 (386)
T 3sjl_D          312 FVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE---ELRSVNQL-GHGPQVITTA  383 (386)
T ss_dssp             EEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC---EEEEECCC-CSSCCEEEEC
T ss_pred             EEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc---EEEEecCC-CCCceeEECC
Confidence            79999999999999999888999999999997 66664 458999999998876   55555422 2234555555

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.96  E-value=8.5e-07  Score=77.86  Aligned_cols=233  Identities=8%  Similarity=-0.008  Sum_probs=135.4

Q ss_pred             EEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107         120 SAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       120 ~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      ..+...++.++.++.++.|..+|. +++.+...............     .+..++.++.++.|..+|..    +.+.+.
T Consensus        97 ~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-----~~~~v~v~~~~g~l~~~d~~----tG~~~W  167 (376)
T 3q7m_A           97 GGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-----SDGLVLIHTSNGQLQALNEA----DGAVKW  167 (376)
T ss_dssp             EEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-----ETTEEEEECTTSEEEEEETT----TCCEEE
T ss_pred             cCceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-----ECCEEEEEcCCCeEEEEECC----CCcEEE
Confidence            445556888999999999999998 56666655433322222222     23467778889999999953    233344


Q ss_pred             EEecCCCCe-----EEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         199 VCRGHERGL-----ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       199 ~~~~~~~~v-----~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      .........     ......  +..++.++.++.+..+|..+++..........               ........+. 
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~---------------~~~~~~~~~~-  229 (376)
T 3q7m_A          168 TVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQA---------------TGSTEIDRLS-  229 (376)
T ss_dssp             EEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC---------------------------
T ss_pred             EEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccC---------------CCCccccccc-
Confidence            433221111     112222  34688888899999999987554211000000               0000000000 


Q ss_pred             ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEE
Q psy2107         274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~  353 (391)
                         .+.......++.++.++.++.+..+|.++++.+....... ...+..  ++..+..++.++.+..+|..+++   ..
T Consensus       230 ---~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~---~~  300 (376)
T 3q7m_A          230 ---DVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-VNDFIV--DGNRIYLVDQNDRVMALTIDGGV---TL  300 (376)
T ss_dssp             ---CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-EEEEEE--ETTEEEEEETTCCEEEEETTTCC---EE
T ss_pred             ---ccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-CCCceE--ECCEEEEEcCCCeEEEEECCCCc---EE
Confidence               0000001125788888999999999999999887765433 333333  36677788889999999998776   43


Q ss_pred             EEec-cccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         354 STFS-SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       354 ~~~~-~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .... .....+......  ++ .|+.++.+|.|.++|.+
T Consensus       301 w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~  336 (376)
T 3q7m_A          301 WTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVE  336 (376)
T ss_dssp             EEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETT
T ss_pred             EeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECC
Confidence            3333 112222333332  33 57778889999999853

>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*

Probab=98.95  E-value=1.6e-06  Score=75.75  Aligned_cols=204  Identities=8%  Similarity=-0.039  Sum_probs=119.9

Q ss_pred             EEEEec--CCEEEEEEC--CCeEEEEcCCCceEEec-cCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce
Q psy2107         120 SAIDFH--NDWILTGCY--DHSVHIWTRRGEHKLNI-PGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI  194 (391)
Q Consensus       120 ~~~~~~--~~~l~t~~~--dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~  194 (391)
                      ..++++  |++|+++..  ++.|.++| ....+... ....+.   +.+.|.  ....+++.+.||.+.+++. ... ..
T Consensus       128 ~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~--~~~~~~~~~~dg~~~~vd~-~g~-~~  199 (373)
T 2mad_H          128 WMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPG--APSTFYLLCAQGGLAKTDH-AGG-AA  199 (373)
T ss_pred             cceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeC--CCceEEEEcCCCCEEEEEC-CCc-EE
Confidence            356665  778888764  57899999 76555433 333332   444443  2345677788999999995 221 11


Q ss_pred             eEEE--EEecCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         195 ECIH--VCRGHERG-LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       195 ~~~~--~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                      ....  .......+ .....+.+++..++..+..+.+.+.|+.........               .+ ....... ...
T Consensus       200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~---------------~~-~~~~~~~-~~~  262 (373)
T 2mad_H          200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKA---------------PI-DALSGGR-KAD  262 (373)
T ss_pred             EEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEee---------------ee-eecCCcc-ccc
Confidence            0111  00011112 123456666555555557789999998653210000               00 0000000 000


Q ss_pred             cCccCcccEEEeccC-CeEEEEEC----------CCeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCc
Q psy2107         272 KGHKEAISAVQWTAV-DEIITSSW----------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQ  338 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~-~~l~s~~~----------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~  338 (391)
                      .........+.++++ ++++.+..          .+.|.++|+.+++.+.++........++|+|+|+ +++++. .++.
T Consensus       263 ~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~  342 (373)
T 2mad_H          263 TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEV  342 (373)
T ss_pred             ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEcCCCCe
Confidence            001122334677754 45665543          3589999999999999998877889999999999 777776 5899


Q ss_pred             EEEEcCCCCC
Q psy2107         339 IRLYDPKVKE  348 (391)
Q Consensus       339 i~iwd~~~~~  348 (391)
                      |.+||+.+.+
T Consensus       343 V~ViD~~t~~  352 (373)
T 2mad_H          343 LHIYDAGAGD  352 (373)
T ss_pred             EEEEECCCCC
Confidence            9999998866

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.93  E-value=2.7e-07  Score=80.65  Aligned_cols=192  Identities=13%  Similarity=0.106  Sum_probs=123.6

Q ss_pred             CCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEe-------cCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEEC
Q psy2107         168 GKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCR-------GHERGLETVTVSESRQQFATGGWD------CLLKIWSA  233 (391)
Q Consensus       168 ~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~  233 (391)
                      .+.+ +++++..+++|.++|+.......+...++.       .....-..+...|+| +++++..+      |.|.++|.
T Consensus        93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~  171 (462)
T 2ece_A           93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH  171 (462)
T ss_dssp             CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred             ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence            3444 555677789999999754444556666662       111234567888999 66666555      78999998


Q ss_pred             CCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc---CcccEEEeccCCe-EEEEE----------------
Q psy2107         234 DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK---EAISAVQWTAVDE-IITSS----------------  293 (391)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~-l~s~~----------------  293 (391)
                      ++.+                             .+..+....   .--..+.|+|++. +++..                
T Consensus       172 ~T~~-----------------------------v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~  222 (462)
T 2ece_A          172 YSFE-----------------------------PLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL  222 (462)
T ss_dssp             TTCC-----------------------------EEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred             CCCe-----------------------------EEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence            7744                             333333111   1123567776554 44443                


Q ss_pred             ---CCCeEEEEecccCceeEEEECC---eeeEEEEE--CCCCCEEEEee------CCCcEEEEcCCCCCcceEEEE--ec
Q psy2107         294 ---WDHTLKIWDAELGGMKSEIVGN---KSFFDVHY--SPLSKLVITAS------ADKQIRLYDPKVKEGAIVKST--FS  357 (391)
Q Consensus       294 ---~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~--~p~~~~l~~g~------~dg~i~iwd~~~~~~~~~~~~--~~  357 (391)
                         .+.+|.+||+.+++.+.++...   .....+.|  +|+++++.+++      .++.|.+|....+. ......  +.
T Consensus       223 ~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~~~~vIdi~  301 (462)
T 2ece_A          223 KDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WNAEKVIEIP  301 (462)
T ss_dssp             HHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EEEEEEEEEC
T ss_pred             hhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-eeEEEEEeCC
Confidence               3789999999999888888874   24445545  99999888776      45688776654321 111111  11


Q ss_pred             cc----------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         358 SH----------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       358 ~h----------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..                ...+..+.++||+..++++.-..+.|.++|+
T Consensus       302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV  350 (462)
T 2ece_A          302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI  350 (462)
T ss_dssp             CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred             CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence            10                2457889999977777777777899999986

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.92  E-value=1e-07  Score=90.21  Aligned_cols=227  Identities=11%  Similarity=0.076  Sum_probs=141.3

Q ss_pred             EEecCCEEEEEECCCeEEEEcC-CCceEEeccCC-C----CCeeE-EEEEecCCCCeEEEEEeC------CCcEEEEeec
Q psy2107         122 IDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH-G----GPVKG-VAWLYNDGKDAAFISVST------DQTAMIWEWK  188 (391)
Q Consensus       122 ~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~-~----~~v~~-l~~~~~~~~~~~l~s~~~------dg~v~iwd~~  188 (391)
                      +++.++.++.++.|+.|..+|. +++.+..+... .    ..+.+ ...    .++ .++.++.      +|.|+.+|..
T Consensus       124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v----~~~-~v~v~~~~~~~~~~g~v~a~D~~  198 (677)
T 1kb0_A          124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV----FKG-KVIIGNGGAEYGVRGYITAYDAE  198 (677)
T ss_dssp             CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE----ETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred             ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE----ECC-EEEEEecccccCCCCEEEEEECC
Confidence            4556888999999999999999 67777766543 1    12221 111    133 3444442      7899999954


Q ss_pred             CCCCceeEEEEEecCCC--------------------------------CeEEEEEcCCCCEEEEEeCCC----------
Q psy2107         189 VESNSIECIHVCRGHER--------------------------------GLETVTVSESRQQFATGGWDC----------  226 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~--------------------------------~v~~l~~~~~~~~l~sg~~dg----------  226 (391)
                          +.+.+..+.....                                ....++++|++..++.+..++          
T Consensus       199 ----tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~  274 (677)
T 1kb0_A          199 ----TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSP  274 (677)
T ss_dssp             ----TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHST
T ss_pred             ----CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCc
Confidence                3344444432111                                113578889888888887664          


Q ss_pred             ---------cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEec-cC-
Q psy2107         227 ---------LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWT-AV-  286 (391)
Q Consensus       227 ---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~-~~-  286 (391)
                               .|..+|.++++..                             ..+..  |.       .....+... ++ 
T Consensus       275 ~~gd~~~~~sv~AlD~~TG~~~-----------------------------W~~~~~~~d~wd~~~~~~p~l~~~~~dG~  325 (677)
T 1kb0_A          275 KGGDNLYLASIVALDPDTGKYK-----------------------------WHYQETPGDNWDYTSTQPMILADIKIAGK  325 (677)
T ss_dssp             TCCCCTTTTEEEEECTTTCCEE-----------------------------EEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred             cCCCCeeeEEEEEEECCCCCEE-----------------------------EEEecCCCcccccccCCCcEEEecccCCc
Confidence                     4777887775532                             22111  11       111111221 22 


Q ss_pred             --CeEEEEECCCeEEEEecccCceeEEEECCe------------ee------------------------EEEEECCCCC
Q psy2107         287 --DEIITSSWDHTLKIWDAELGGMKSEIVGNK------------SF------------------------FDVHYSPLSK  328 (391)
Q Consensus       287 --~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------------~i------------------------~~~~~~p~~~  328 (391)
                        ..++.++.+|.++++|..+|+.+..+....            ++                        ..++++|++.
T Consensus       326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~  405 (677)
T 1kb0_A          326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG  405 (677)
T ss_dssp             EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred             EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence              358888999999999999999987765321            11                        1467889888


Q ss_pred             EEEEeeC-------------------------------------------CCcEEEEcCCCCCcceEEEEeccccCcEEE
Q psy2107         329 LVITASA-------------------------------------------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQS  365 (391)
Q Consensus       329 ~l~~g~~-------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~  365 (391)
                      ++++...                                           .|.|..||+.+++   .+.... +..++..
T Consensus       406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~-~~~~~~~  481 (677)
T 1kb0_A          406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK---AAWSVE-HVSPWNG  481 (677)
T ss_dssp             EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE---EEEEEE-ESSSCCC
T ss_pred             EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc---EEeecC-CCCCCcC
Confidence            8777543                                           2779999998766   444443 3334445


Q ss_pred             EEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         366 VRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       366 ~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..+...+ .+++.++.||.+++||++
T Consensus       482 g~~~~~g-~~v~~g~~dg~l~a~D~~  506 (677)
T 1kb0_A          482 GTLTTAG-NVVFQGTADGRLVAYHAA  506 (677)
T ss_dssp             CEEEETT-TEEEEECTTSEEEEEETT
T ss_pred             cceEeCC-CEEEEECCCCcEEEEECC
Confidence            5555534 467778999999999974

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.91  E-value=1.4e-07  Score=89.36  Aligned_cols=231  Identities=9%  Similarity=0.035  Sum_probs=138.3

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCC--CCCeeEEEEEecCCCCeEEEEEe-----CCCcEEEEeecCCCCce
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH--GGPVKGVAWLYNDGKDAAFISVS-----TDQTAMIWEWKVESNSI  194 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~--~~~v~~l~~~~~~~~~~~l~s~~-----~dg~v~iwd~~~~~~~~  194 (391)
                      ++.++.++.++.||.|..+|. +++.+......  ......+...|.-.++..++..+     .+|.|..||..    +.
T Consensus       118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~----tG  193 (689)
T 1yiq_A          118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAE----TG  193 (689)
T ss_dssp             EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETT----TC
T ss_pred             EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECC----CC
Confidence            456788999999999999998 67777655432  11111111101001344443322     37899999954    23


Q ss_pred             eEEEEEecC-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc----------------
Q psy2107         195 ECIHVCRGH-------------------------------ERGLETVTVSESRQQFATGGWDCL----------------  227 (391)
Q Consensus       195 ~~~~~~~~~-------------------------------~~~v~~l~~~~~~~~l~sg~~dg~----------------  227 (391)
                      +.+..+...                               ......++++|+..+++.++.++.                
T Consensus       194 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y  273 (689)
T 1yiq_A          194 KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLF  273 (689)
T ss_dssp             CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTT
T ss_pred             cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence            344444310                               011135788998888998887764                


Q ss_pred             ---EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEeccCC----eEEE
Q psy2107         228 ---LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWTAVD----EIIT  291 (391)
Q Consensus       228 ---i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----~l~s  291 (391)
                         |..||.++++..                             ..+..  |.       .+........++    .++.
T Consensus       274 ~~~v~AlD~~TG~~~-----------------------------W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~  324 (689)
T 1yiq_A          274 LSSIVAVNADTGEYV-----------------------------WHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQ  324 (689)
T ss_dssp             TTEEEEEETTTCCEE-----------------------------EEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEE
T ss_pred             eeeEEEEEccCCcee-----------------------------EeeecCCcccccccCCCCcEEEeeccCCcEEEEEEE
Confidence               888888876542                             22211  11       111111111122    5788


Q ss_pred             EECCCeEEEEecccCceeEEEECCe----------------------------------------eeEEEEECCCCCEEE
Q psy2107         292 SSWDHTLKIWDAELGGMKSEIVGNK----------------------------------------SFFDVHYSPLSKLVI  331 (391)
Q Consensus       292 ~~~dg~i~iwd~~~~~~~~~~~~~~----------------------------------------~i~~~~~~p~~~~l~  331 (391)
                      ++.+|.++++|.++|+.+.......                                        ....++++|+..+++
T Consensus       325 ~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~y  404 (689)
T 1yiq_A          325 APKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVY  404 (689)
T ss_dssp             CCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred             ECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEE
Confidence            8999999999999999875443211                                        011267888877777


Q ss_pred             EeeC---------------------------------------------CCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         332 TASA---------------------------------------------DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       332 ~g~~---------------------------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      +...                                             +|.|+.||+.+++   .+.....+. ++...
T Consensus       405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~---~~W~~~~~~-~~~~g  480 (689)
T 1yiq_A          405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQ---AAWEVPYVT-IFNGG  480 (689)
T ss_dssp             EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTE---EEEEEEESS-SCCCC
T ss_pred             EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCC---eEeEccCCC-CccCc
Confidence            6532                                             3779999998876   544544333 23333


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .+.. .+.+++.++.||.++.||.+
T Consensus       481 ~~~t-agglvf~gt~dg~l~a~D~~  504 (689)
T 1yiq_A          481 TLST-AGNLVFEGSADGRVIAYAAD  504 (689)
T ss_dssp             EEEE-TTTEEEEECTTSEEEEEETT
T ss_pred             cceE-CCCEEEEECCCCcEEEEECC
Confidence            4555 34578889999999999964

>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A

Probab=98.90  E-value=1.8e-06  Score=75.79  Aligned_cols=218  Identities=10%  Similarity=-0.007  Sum_probs=132.6

Q ss_pred             ecCCEEEEEECCCeEEEEcC-CCceEEeccCC---------CCCee-EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         124 FHNDWILTGCYDHSVHIWTR-RGEHKLNIPGH---------GGPVK-GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       124 ~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~---------~~~v~-~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ..++.+++++.++.|..+|. +++.+......         ...+. .+..     .+..++.++.++.|..+|..    
T Consensus        51 v~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~v~~~~g~l~a~d~~----  121 (376)
T 3q7m_A           51 LADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-----SGGHVYIGSEKAQVYALNTS----  121 (376)
T ss_dssp             EETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-----ETTEEEEEETTSEEEEEETT----
T ss_pred             EECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-----eCCEEEEEcCCCEEEEEECC----
Confidence            35788888999999999999 56666554432         12222 2222     34567778899999999943    


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      +.+.+................  +..++.++.++.|..+|..+++..                             ....
T Consensus       122 tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~-----------------------------W~~~  170 (376)
T 3q7m_A          122 DGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVK-----------------------------WTVN  170 (376)
T ss_dssp             TCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEE-----------------------------EEEE
T ss_pred             CCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEE-----------------------------EEEe
Confidence            233444444332222222222  347888889999999999876542                             1111


Q ss_pred             CccCc-----ccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeee-----EE---EEECC--CCCEEEEeeCCC
Q psy2107         273 GHKEA-----ISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF-----FD---VHYSP--LSKLVITASADK  337 (391)
Q Consensus       273 ~~~~~-----v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i-----~~---~~~~p--~~~~l~~g~~dg  337 (391)
                      .....     ...... .++.++.++.++.+..+|..+++.+.......+.     ..   +...|  .+..++.++.++
T Consensus       171 ~~~~~~~~~~~~~~~~-~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g  249 (376)
T 3q7m_A          171 LDMPSLSLRGESAPTT-AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNG  249 (376)
T ss_dssp             CCC-----CCCCCCEE-ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTS
T ss_pred             CCCCceeecCCCCcEE-ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCc
Confidence            11000     011111 2577888889999999999999988777644210     00   11112  256777778899


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+..+|..+++   ......  ......+...  ++ .+..++.+|.|..+|.
T Consensus       250 ~l~~~d~~tG~---~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~  294 (376)
T 3q7m_A          250 NLTALDLRSGQ---IMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTI  294 (376)
T ss_dssp             CEEEEETTTCC---EEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEET
T ss_pred             EEEEEECCCCc---EEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEEC
Confidence            99999998766   333332  2234445443  33 5667778889988885

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.89  E-value=3.5e-06  Score=69.10  Aligned_cols=191  Identities=9%  Similarity=0.012  Sum_probs=124.7

Q ss_pred             eeEEEEEecCCCCeEEEEEeC--CCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         158 VKGVAWLYNDGKDAAFISVST--DQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       158 v~~l~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      ...+.|   ++++.++++.+.  ++.|+++|+.  +  .+.+..+.-. ......+++.. +++.++.-.++.+.++|..
T Consensus        23 ~~Gl~~---~~dg~Lyvstg~~~~s~v~~iD~~--t--g~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~   94 (266)
T 2iwa_A           23 TQGLVY---AENDTLFESTGLYGRSSVRQVALQ--T--GKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRR   94 (266)
T ss_dssp             EEEEEE---CSTTEEEEEECSTTTCEEEEEETT--T--CCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETT
T ss_pred             cccEEE---eCCCeEEEECCCCCCCEEEEEECC--C--CCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECC
Confidence            578999   666655555543  5799999954  3  3344444321 12234566653 2334444567899999997


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG  314 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~  314 (391)
                      +.+                             .+..+......-..++. +++.++++..++.|.++|..+.+....+..
T Consensus        95 t~~-----------------------------v~~~i~~g~~~g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V  144 (266)
T 2iwa_A           95 TLS-----------------------------NIKNFTHQMKDGWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNV  144 (266)
T ss_dssp             TTE-----------------------------EEEEEECCSSSCCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred             CCc-----------------------------EEEEEECCCCCeEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence            633                             34444321111233444 345566666789999999999998888774


Q ss_pred             Ce------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-------------cCcEEEEEECCCCCCE
Q psy2107         315 NK------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-------------KEWVQSVRWSPIDPQL  375 (391)
Q Consensus       315 ~~------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~~~~~~~~~~~  375 (391)
                      ..      .++.+.|. +|...+....++.|.+.|+.+++   ++..+.-.             ....+.++|+|++.++
T Consensus       145 g~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~---V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~l  220 (266)
T 2iwa_A          145 KYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT---LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRI  220 (266)
T ss_dssp             EETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC---EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEE
T ss_pred             CCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc---EEEEEECCCcccccccccccccCceEEEEEcCCCCEE
Confidence            32      25677777 67655555567899999998877   55544321             1356999999977889


Q ss_pred             EEEeeCCCcEEEEec
Q psy2107         376 FVSASFDNSVKLWDL  390 (391)
Q Consensus       376 l~s~~~dg~v~iwdl  390 (391)
                      ++++...+.|.+-++
T Consensus       221 fVTgk~~~~v~~i~l  235 (266)
T 2iwa_A          221 FVTGKLWPKLFEIKL  235 (266)
T ss_dssp             EEEETTCSEEEEEEE
T ss_pred             EEECCCCCeEEEEEE
Confidence            999988899888775

>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1

Probab=98.87  E-value=3.3e-07  Score=86.70  Aligned_cols=81  Identities=12%  Similarity=0.068  Sum_probs=58.6

Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cccCcEEEEEECCCCCC
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS-SHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~  374 (391)
                      |.|..||+.+++.+..+....+.....+...+.+++.++.||.+++||.++++   .+..+. ++.....-+.+.+++..
T Consensus       457 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~---~lw~~~~~~~~~~~p~~y~~~G~~  533 (677)
T 1kb0_A          457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---KLWEAPTGTGVVAAPSTYMVDGRQ  533 (677)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cEEEEEeCCCCcEEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc---eeeeeeCCCCcccCCEEEEeCCEE
Confidence            78999999999999888776655555666778888999999999999999877   555554 23222344556564555


Q ss_pred             EEEEe
Q psy2107         375 LFVSA  379 (391)
Q Consensus       375 ~l~s~  379 (391)
                      +++..
T Consensus       534 ~v~~~  538 (677)
T 1kb0_A          534 YVSVA  538 (677)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            55553

>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*

Probab=98.87  E-value=7.9e-08  Score=91.61  Aligned_cols=199  Identities=10%  Similarity=0.048  Sum_probs=118.4

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEE-----eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc-
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISV-----STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL-  227 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~-----~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-  227 (391)
                      |...+..++|   +|++++||-+     +.+..|++||+.  ++..... .+..  .....++|+ |++.|+.++.+.. 
T Consensus       127 ~~~~l~~~~~---SpDg~~lAy~~~~~G~~~~~i~v~dl~--tg~~~~~-~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~  197 (693)
T 3iuj_A          127 GTTALDQLSF---SRDGRILAYSLSLAGSDWREIHLMDVE--SKQPLET-PLKD--VKFSGISWL-GNEGFFYSSYDKPD  197 (693)
T ss_dssp             SCCEEEEEEE---CTTSSEEEEEEECSSCCEEEEEEEETT--TCSEEEE-EEEE--EESCCCEEE-TTTEEEEEESSCCC
T ss_pred             CcEEEEEEEE---CCCCCEEEEEEecCCCceEEEEEEECC--CCCCCcc-ccCC--ceeccEEEe-CCCEEEEEEecCcc
Confidence            4556888899   7889888743     333578999965  3332211 2221  113567899 9999998887743 


Q ss_pred             ------------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-ccCcccEEEeccCCe-E-EEE
Q psy2107         228 ------------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDE-I-ITS  292 (391)
Q Consensus       228 ------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-l-~s~  292 (391)
                                  |++|++.+....                         ...+..... |...+..+.|++++. | ++.
T Consensus       198 ~~~~~~~~~~~~v~~~~lgt~~~~-------------------------~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~  252 (693)
T 3iuj_A          198 GSELSARTDQHKVYFHRLGTAQED-------------------------DRLVFGAIPAQHHRYVGATVTEDDRFLLISA  252 (693)
T ss_dssp             -------CCCCEEEEEETTSCGGG-------------------------CEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred             cccccccCCCcEEEEEECCCCccc-------------------------ceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence                        888988663320                         112222233 444567888997765 4 333


Q ss_pred             EC---CCeEEEEecccCc-eeEEEECCe-eeEEEEECCCCCEEEEee-C---CCcEEEEcCCCCCcceEEEEeccccCcE
Q psy2107         293 SW---DHTLKIWDAELGG-MKSEIVGNK-SFFDVHYSPLSKLVITAS-A---DKQIRLYDPKVKEGAIVKSTFSSHKEWV  363 (391)
Q Consensus       293 ~~---dg~i~iwd~~~~~-~~~~~~~~~-~i~~~~~~p~~~~l~~g~-~---dg~i~iwd~~~~~~~~~~~~~~~h~~~v  363 (391)
                      +.   ...|+++|+.++. ....+..+. ..... ++++|..|+..+ .   .+.|..+|+....... ...+..|...+
T Consensus       253 ~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~  330 (693)
T 3iuj_A          253 ANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAH-WRDLIPERQQV  330 (693)
T ss_dssp             ESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGG-CEEEECCCSSC
T ss_pred             ccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccc-cEEEecCCCCE
Confidence            32   3589999998764 334444333 33333 666666555443 3   3679999987654211 12344555555


Q ss_pred             EEEEECCCCCCEEEEeeCCC--cEEEEec
Q psy2107         364 QSVRWSPIDPQLFVSASFDN--SVKLWDL  390 (391)
Q Consensus       364 ~~~~~~~~~~~~l~s~~~dg--~v~iwdl  390 (391)
                      .  .|++++..++++...+|  .|++||+
T Consensus       331 ~--~~s~~g~~lv~~~~~~g~~~l~~~d~  357 (693)
T 3iuj_A          331 L--TVHSGSGYLFAEYMVDATARVEQFDY  357 (693)
T ss_dssp             E--EEEEETTEEEEEEEETTEEEEEEECT
T ss_pred             E--EEEEECCEEEEEEEECCeeEEEEEEC
Confidence            5  78886655555555665  5788875

>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}

Probab=98.86  E-value=9.2e-08  Score=82.94  Aligned_cols=197  Identities=8%  Similarity=-0.014  Sum_probs=125.8

Q ss_pred             CCeeEEEEEecCCCCeEEEEEe--CCCcEEEEeecCCCCceeEEEEE-------ecCCCCeEEEEEcCCCCEEEEEeC--
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVS--TDQTAMIWEWKVESNSIECIHVC-------RGHERGLETVTVSESRQQFATGGW--  224 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~sg~~--  224 (391)
                      .....+++   +++++++++..  .++.+++|.+.  ...   +..+       ..+...+..++++++++++++-..  
T Consensus        17 ~~p~~va~---~~~g~~~v~~~~~~~~~~~l~~~~--~g~---~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~   88 (343)
T 2qe8_A           17 LAPGNITL---TPDGRLFLSLHQFYQPEMQVAELT--QDG---LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ   88 (343)
T ss_dssp             SCEEEEEE---CTTSCEEEEECGGGCCSCSEEEEE--TTE---EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH
T ss_pred             CCcceEEE---CCCCCEEEEeCCCCCCceEEEEEC--CCC---eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC
Confidence            57888999   77888888864  23436677664  221   2222       134568999999999886665443  


Q ss_pred             ---CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------CccCcccEEEecc-CCeEEEE-E
Q psy2107         225 ---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHKEAISAVQWTA-VDEIITS-S  293 (391)
Q Consensus       225 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~~-~~~l~s~-~  293 (391)
                         ++.|.+||+.+++.                             +..+.      .+...+..+++++ ++.++.+ .
T Consensus        89 ~~~~~~i~~~d~~tg~~-----------------------------~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~  139 (343)
T 2qe8_A           89 SKSVPKLVAWDTLNNQL-----------------------------SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDP  139 (343)
T ss_dssp             HTSCCEEEEEETTTTEE-----------------------------EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEEC
T ss_pred             cCCCCeEEEEECCCCeE-----------------------------EEEEECChhhcccccccceEEEecCCCEEEEEcC
Confidence               57899999976442                             11111      1234567889984 4665444 4


Q ss_pred             ---CCCeEEEEecccCceeEEEECC------------------------------eeeEEEEECCCCCEEEEeeCCC-cE
Q psy2107         294 ---WDHTLKIWDAELGGMKSEIVGN------------------------------KSFFDVHYSPLSKLVITASADK-QI  339 (391)
Q Consensus       294 ---~dg~i~iwd~~~~~~~~~~~~~------------------------------~~i~~~~~~p~~~~l~~g~~dg-~i  339 (391)
                         .++.|.+||+.+++....+..+                              ..+..++|+|+++.|+.+...+ .+
T Consensus       140 ~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l  219 (343)
T 2qe8_A          140 APDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSM  219 (343)
T ss_dssp             CSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEE
T ss_pred             ccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeE
Confidence               5789999999887765544221                              1257899999999888876665 55


Q ss_pred             EEEcCCC---CC--cceEE--EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         340 RLYDPKV---KE--GAIVK--STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       340 ~iwd~~~---~~--~~~~~--~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.++...   ..  .....  ....++......+++++ ++.++++...++.|.+||.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~  276 (343)
T 2qe8_A          220 YRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITS  276 (343)
T ss_dssp             EEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEET
T ss_pred             EEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECC-CCCEEEEccCCCeEEEEEC
Confidence            5554211   00  00000  01113444567899999 5678888888999999985

>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}

Probab=98.84  E-value=1.8e-07  Score=80.53  Aligned_cols=220  Identities=15%  Similarity=0.036  Sum_probs=136.1

Q ss_pred             cEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         118 WVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       118 ~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      .+.++... ...+..++.+  |..+|.++.....+............   .  +..+..++.++.+..+|..     ...
T Consensus        61 ~~~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~---~--~~~l~v~t~~~~l~~~d~~-----g~~  128 (330)
T 3hxj_A           61 IECRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTI---F--EDILYVTSMDGHLYAINTD-----GTE  128 (330)
T ss_dssp             EEECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEE---E--TTEEEEECTTSEEEEECTT-----SCE
T ss_pred             cccceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceE---E--CCEEEEEecCCEEEEEcCC-----CCE
Confidence            45666665 5566666665  88888766555444433333333444   1  3457778889999999832     223


Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE  276 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (391)
                      ......+...+.++...+++. ++.++.++.|..+|.. ++                             ..........
T Consensus       129 ~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~-----------------------------~~~~~~~~~~  177 (330)
T 3hxj_A          129 KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT-----------------------------EKWRFKTNDA  177 (330)
T ss_dssp             EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC-----------------------------EEEEEECSSC
T ss_pred             EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC-----------------------------EeEEEecCCC
Confidence            444444555667777777776 6667788999999986 33                             2222333344


Q ss_pred             cccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107         277 AISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~  355 (391)
                      .+.++...+++.++.++  +.|..+| .+++........ ..+.++...++|.+. .++.++.+..+|.. +.   ....
T Consensus       178 ~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~~-g~---~~~~  249 (330)
T 3hxj_A          178 ITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINPD-GT---EKWR  249 (330)
T ss_dssp             CCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECTT-SC---EEEE
T ss_pred             ceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECCC-CC---EeEE
Confidence            56677776677777777  8899999 777777666544 357778888877544 45667888888743 22   2233


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +......+.++...+ ++. |..++.+|.|..+|.
T Consensus       250 ~~~~~~~~~~~~~~~-~g~-l~v~t~~ggl~~~d~  282 (330)
T 3hxj_A          250 FKTGKRIESSPVIGN-TDT-IYFGSYDGHLYAINP  282 (330)
T ss_dssp             EECSSCCCSCCEECT-TSC-EEEECTTCEEEEECT
T ss_pred             eeCCCCccccceEcC-CCe-EEEecCCCCEEEECC
Confidence            333333344556655 444 666777878887763

>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}

Probab=98.83  E-value=1.8e-06  Score=76.18  Aligned_cols=221  Identities=9%  Similarity=-0.020  Sum_probs=125.0

Q ss_pred             EEEec--CCEEEEEE----------CCCeEEEEcCC-CceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--
Q psy2107         121 AIDFH--NDWILTGC----------YDHSVHIWTRR-GEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST--  178 (391)
Q Consensus       121 ~~~~~--~~~l~t~~----------~dg~i~iwd~~-~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~--  178 (391)
                      .++++  +++++++.          .++.|.++|.. .+.+..+.--       ......+.|   ++++++++.+..  
T Consensus       122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~---spDGk~lyV~n~~~  198 (426)
T 3c75_H          122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNAL---TPDNKNLLFYQFSP  198 (426)
T ss_dssp             EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEE---CTTSSEEEEEECSS
T ss_pred             ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEE---cCCCCEEEEEecCC
Confidence            56776  56565554          46799999994 4444444311       233457888   888998888774  


Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCC----CCCCCCCCCc--c
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES-RQQFATGGWDCLLKIWSADISKERG----DPSENGDEGT--T  251 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~----~~~~~~~~~~--~  251 (391)
                      ++.|.+.|..    ..+.+..+....  .  ....|+ .+.+++.+.||.+.+.+..+++...    .......+..  .
T Consensus       199 ~~~VsVID~~----t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~  270 (426)
T 3c75_H          199 APAVGVVDLE----GKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHP  270 (426)
T ss_dssp             SCEEEEEETT----TTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCC
T ss_pred             CCeEEEEECC----CCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEe
Confidence            5789999954    334444544211  1  222232 2445555566666666664333220    0000000000  0


Q ss_pred             --ccccccccccCCCCCceeeecC-----------------------ccCcccEEEeccC-CeEEEEEC----------C
Q psy2107         252 --SKKRKKEYSSASSRTPLITLKG-----------------------HKEAISAVQWTAV-DEIITSSW----------D  295 (391)
Q Consensus       252 --~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~~~~~-~~l~s~~~----------d  295 (391)
                        .......+...... .+..+..                       .......++++++ +++++...          +
T Consensus       271 ~~~~dg~~~~~~s~~g-~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s  349 (426)
T 3c75_H          271 AFSLRSGRLVWPTYTG-KIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS  349 (426)
T ss_dssp             EECTTTCEEEEEBTTS-EEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred             eecCCCCEEEEEeCCC-cEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence              00000000000000 0000000                       0111223677744 55655532          3


Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCcEEEEcCCCCCcceEEEEe
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQIRLYDPKVKEGAIVKSTF  356 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~i~iwd~~~~~~~~~~~~~  356 (391)
                      +.|.++|+.+.+.+.++........++|+|+|+ ++++.. .++.|.++|+.+.+   .+..+
T Consensus       350 ~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k---vv~tI  409 (426)
T 3c75_H          350 RFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE---ELRSV  409 (426)
T ss_dssp             EEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC---EEEEE
T ss_pred             CEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC---EEEEe
Confidence            579999999999999998877889999999999 888877 58999999998877   55554

>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}

Probab=98.83  E-value=4.7e-07  Score=85.87  Aligned_cols=84  Identities=19%  Similarity=0.095  Sum_probs=60.7

Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc-cCcEEEEEECCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH-KEWVQSVRWSPIDP  373 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~  373 (391)
                      +|.|+.||+.+++.+..+..+.+...-.+...+.+++.|+.||.++.||.++++   .+..+... .....-+.|..++.
T Consensus       454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~---~lw~~~~~~~~~~~p~ty~~~G~  530 (689)
T 1yiq_A          454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGE---KLWEQPAASGVMAAPVTYSVDGE  530 (689)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred             ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCc---cceeeeCCCCcccCceEEEECCE
Confidence            478999999999999888776655544566678899999999999999999877   55555433 22224466666566


Q ss_pred             CEEEEeeC
Q psy2107         374 QLFVSASF  381 (391)
Q Consensus       374 ~~l~s~~~  381 (391)
                      ++++..+.
T Consensus       531 qyv~~~~G  538 (689)
T 1yiq_A          531 QYVTFMAG  538 (689)
T ss_dssp             EEEEEEEC
T ss_pred             EEEEEEec
Confidence            66665543

>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}

Probab=98.82  E-value=1.9e-06  Score=75.48  Aligned_cols=215  Identities=12%  Similarity=0.084  Sum_probs=127.3

Q ss_pred             EEEEEECCCeEEEEcCCCc----eEE-ecc------CCC-CCeeEEEEEecCCCCeEEEEEeCC------CcEEEEeecC
Q psy2107         128 WILTGCYDHSVHIWTRRGE----HKL-NIP------GHG-GPVKGVAWLYNDGKDAAFISVSTD------QTAMIWEWKV  189 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~----~~~-~~~------~~~-~~v~~l~~~~~~~~~~~l~s~~~d------g~v~iwd~~~  189 (391)
                      +++++..++.|.|+|+...    .+. .+.      ... ..-..+..   .+++ +++++..+      |.|.+.|.. 
T Consensus        98 l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~---~pdG-i~Vs~~g~~~g~~~g~v~vlD~~-  172 (462)
T 2ece_A           98 LIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC---GPDA-IYISALGNEEGEGPGGILMLDHY-  172 (462)
T ss_dssp             EEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE---CSSC-EEEEEEEETTSCSCCEEEEECTT-
T ss_pred             EEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE---CCCe-EEEEcCCCcCCCCCCeEEEEECC-
Confidence            5566677889999998422    222 331      111 12334455   5677 66666655      789999833 


Q ss_pred             CCCceeEEEEEecCCC---CeEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCCCCCCCCCCCC
Q psy2107         190 ESNSIECIHVCRGHER---GLETVTVSESRQQFATGG-------------------WDCLLKIWSADISKERGDPSENGD  247 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~---~v~~l~~~~~~~~l~sg~-------------------~dg~i~iwd~~~~~~~~~~~~~~~  247 (391)
                         +.+.+..+.....   --..+.|+|+++.+++..                   .+.+|.+||+.+.+          
T Consensus       173 ---T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k----------  239 (462)
T 2ece_A          173 ---SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK----------  239 (462)
T ss_dssp             ---TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE----------
T ss_pred             ---CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc----------
Confidence               3455555542211   233577899999888874                   36899999997632          


Q ss_pred             CCccccccccccccCCCCCceeeecCc--cCcccEEEe--ccCCe-EEEE-E-----CCCeEEEEecccCce--eEEE--
Q psy2107         248 EGTTSKKRKKEYSSASSRTPLITLKGH--KEAISAVQW--TAVDE-IITS-S-----WDHTLKIWDAELGGM--KSEI--  312 (391)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~~-l~s~-~-----~dg~i~iwd~~~~~~--~~~~--  312 (391)
                                         .+.++...  ......+.|  +|++. ++++ -     .+++|.+|....+..  .+.+  
T Consensus       240 -------------------~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi  300 (462)
T 2ece_A          240 -------------------RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEI  300 (462)
T ss_dssp             -------------------EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEE
T ss_pred             -------------------EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeC
Confidence                               33334321  122344555  66654 4444 4     667888776654431  1111  


Q ss_pred             EC-----------------CeeeEEEEECCCCCEEEEeeC-CCcEEEEcCCCCCcceEEEEecccc--------------
Q psy2107         313 VG-----------------NKSFFDVHYSPLSKLVITASA-DKQIRLYDPKVKEGAIVKSTFSSHK--------------  360 (391)
Q Consensus       313 ~~-----------------~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~~~~~~~~~~~~h~--------------  360 (391)
                      ..                 ......+.++|||++|.++.. .+.|.+||+.......++..+....              
T Consensus       301 ~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~  380 (462)
T 2ece_A          301 PAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLT  380 (462)
T ss_dssp             CCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCC
T ss_pred             CCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCC
Confidence            11                 123577899999998887764 6899999986443333444443220              


Q ss_pred             CcEEEEEECCCCCCEEEEe
Q psy2107         361 EWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       361 ~~v~~~~~~~~~~~~l~s~  379 (391)
                      +....++++|++.+++++.
T Consensus       381 ggPr~~~lSpDGk~LyVaN  399 (462)
T 2ece_A          381 GAPQMLEISRDGRRVYVTN  399 (462)
T ss_dssp             SCCCCEEECTTSSEEEEEC
T ss_pred             CCCCEEEEcCCCCEEEEEc
Confidence            1368899999665555544

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.71  E-value=1.3e-05  Score=64.93  Aligned_cols=183  Identities=13%  Similarity=0.119  Sum_probs=115.4

Q ss_pred             CCCCCe--eEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcCCCCEEEEE-eCCC
Q psy2107         153 GHGGPV--KGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIECIHVCRGHERG-LETVTVSESRQQFATG-GWDC  226 (391)
Q Consensus       153 ~~~~~v--~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg-~~dg  226 (391)
                      .|...-  ..+.|   + ++.++.+.+.+|  .|+++|+.  +  .+.+..+...... -..+++.  +..|... -.++
T Consensus        38 phd~~~ftqGL~~---~-~~~LyestG~~g~S~v~~vD~~--T--gkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~  107 (262)
T 3nol_A           38 PHDTKAFTEGFFY---R-NGYFYESTGLNGRSSIRKVDIE--S--GKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNG  107 (262)
T ss_dssp             ECCTTCEEEEEEE---E-TTEEEEEEEETTEEEEEEECTT--T--CCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSS
T ss_pred             cCCCCcccceEEE---E-CCEEEEECCCCCCceEEEEECC--C--CcEEEEEecCCccceeEEEEe--CCEEEEEEeeCC
Confidence            455443  67888   4 466777777776  89999854  3  3344444332221 1334443  4445444 4588


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccC
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG  306 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~  306 (391)
                      .+.+||..+.+                             .+.++..... -..+++. ++.|+.+..++.|.++|..+.
T Consensus       108 ~v~v~D~~t~~-----------------------------~~~ti~~~~e-G~glt~d-g~~L~~SdGs~~i~~iDp~T~  156 (262)
T 3nol_A          108 LGFVWNIRNLR-----------------------------QVRSFNYDGE-GWGLTHN-DQYLIMSDGTPVLRFLDPESL  156 (262)
T ss_dssp             EEEEEETTTCC-----------------------------EEEEEECSSC-CCCEEEC-SSCEEECCSSSEEEEECTTTC
T ss_pred             EEEEEECccCc-----------------------------EEEEEECCCC-ceEEecC-CCEEEEECCCCeEEEEcCCCC
Confidence            99999997733                             4445543221 1344443 455666666889999999999


Q ss_pred             ceeEEEECC---ee---eEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------cCcEEEEEE
Q psy2107         307 GMKSEIVGN---KS---FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------KEWVQSVRW  368 (391)
Q Consensus       307 ~~~~~~~~~---~~---i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------~~~v~~~~~  368 (391)
                      +.+.++...   .+   ++.+.|. +|+..+..-.++.|.+.|+++++   +...+...            ....+.|||
T Consensus       157 ~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~---V~~~Id~~~L~~~~~~~~~~~~vlNGIA~  232 (262)
T 3nol_A          157 TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGK---VTGIIDLNGILAEAGPLPSPIDVLNGIAW  232 (262)
T ss_dssp             SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCB---EEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred             eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCc---EEEEEECCcCccccccccCcCCceEEEEE
Confidence            988887653   23   3456776 67666555568899999998877   44444321            235699999


Q ss_pred             CCCCCCEEEEee
Q psy2107         369 SPIDPQLFVSAS  380 (391)
Q Consensus       369 ~~~~~~~l~s~~  380 (391)
                      +|+..++++||-
T Consensus       233 dp~~~~lfVTGK  244 (262)
T 3nol_A          233 DKEHHRLFVTGK  244 (262)
T ss_dssp             ETTTTEEEEEET
T ss_pred             cCCCCEEEEECC
Confidence            997777777663

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.69  E-value=3.2e-05  Score=64.14  Aligned_cols=215  Identities=13%  Similarity=0.105  Sum_probs=127.0

Q ss_pred             cEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCC-CeEEEEEeCCCcEEEEeecCCCC
Q psy2107         118 WVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGK-DAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       118 ~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ...+++++  ++ ++++-..++.|..++.++.....+. ........+++   +++ +.++++-...+.|.+++++  ..
T Consensus        37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~---d~~~~~lyv~d~~~~~I~~~~~~--g~  111 (267)
T 1npe_A           37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL---DHLGRTIFWTDSQLDRIEVAKMD--GT  111 (267)
T ss_dssp             EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE---ETTTTEEEEEETTTTEEEEEETT--SC
T ss_pred             cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEE---EecCCeEEEEECCCCEEEEEEcC--CC
Confidence            45678886  34 4445556789999999665443332 22246788998   443 5566666667889998854  22


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      ....+  ..........++++|++..|+.+..   .+.|..++++....                           ..+ 
T Consensus       112 ~~~~~--~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~---------------------------~~~-  161 (267)
T 1npe_A          112 QRRVL--FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR---------------------------RIL-  161 (267)
T ss_dssp             SCEEE--ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC---------------------------EEE-
T ss_pred             CEEEE--EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc---------------------------EEE-
Confidence            22221  2222246789999996665555543   36788888753110                           011 


Q ss_pred             eecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         270 TLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                       ....-.....+++++ ++.|+.+ ...+.|.++|..................++.. .+.++++....+.|..+|..++
T Consensus       162 -~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g  239 (267)
T 1npe_A          162 -AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAIS  239 (267)
T ss_dssp             -ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTTT
T ss_pred             -EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeEEEEeCCCC
Confidence             111223457888986 4666555 45689999998765444334333334556654 3444444445689999998765


Q ss_pred             CcceEEEEecccc-CcEEEEEECCCC
Q psy2107         348 EGAIVKSTFSSHK-EWVQSVRWSPID  372 (391)
Q Consensus       348 ~~~~~~~~~~~h~-~~v~~~~~~~~~  372 (391)
                      +   ....+.... .....+++.|++
T Consensus       240 ~---~~~~i~~g~~~~p~gi~~~~~~  262 (267)
T 1npe_A          240 K---EMDTFHPHKQTRLYGITIALSQ  262 (267)
T ss_dssp             E---EEEEECCSSCCCCCCEEEECSC
T ss_pred             C---ceEEEccccccccceeeecCcc
Confidence            5   455554332 246778888743

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.69  E-value=3.3e-05  Score=66.05  Aligned_cols=227  Identities=12%  Similarity=0.073  Sum_probs=132.6

Q ss_pred             EEEec--CCEEEEEECCCeEEEEcCCCceEEeccC--------------------CCCCeeEEEEEecCC-CCeEEEEEe
Q psy2107         121 AIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPG--------------------HGGPVKGVAWLYNDG-KDAAFISVS  177 (391)
Q Consensus       121 ~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~v~~l~~~~~~~-~~~~l~s~~  177 (391)
                      +++++  +++++++..++.|..|+..+.....+..                    .......+++   ++ ++.++ .+.
T Consensus        23 ~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~---~~~~g~l~-v~d   98 (322)
T 2fp8_A           23 SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY---NLQNNQLY-IVD   98 (322)
T ss_dssp             CEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE---ETTTTEEE-EEE
T ss_pred             EEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEE---cCCCCcEE-EEE
Confidence            45665  5568888889999999986644433221                    0134678888   44 45544 444


Q ss_pred             CCCcEEEEeecCCCCceeEEEEE-ec-CCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEECCCCC
Q psy2107         178 TDQTAMIWEWKVESNSIECIHVC-RG-HERGLETVTVSE-SRQQFATGGW-----------------DCLLKIWSADISK  237 (391)
Q Consensus       178 ~dg~v~iwd~~~~~~~~~~~~~~-~~-~~~~v~~l~~~~-~~~~l~sg~~-----------------dg~i~iwd~~~~~  237 (391)
                      ..+.+..+|..  ....+.+... .+ .......+++.+ +|++.++-..                 ++.|..||..+++
T Consensus        99 ~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~  176 (322)
T 2fp8_A           99 CYYHLSVVGSE--GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE  176 (322)
T ss_dssp             TTTEEEEECTT--CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred             CCCCEEEEeCC--CCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence            44557777732  2222222111 11 123467899999 8876665432                 2567777764422


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEE-ECCCeEEEEecccCc--eeEEE-
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAELGG--MKSEI-  312 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~~~--~~~~~-  312 (391)
                      .                              ..+...-.....+++++++ .++.+ +..+.|..|++....  ....+ 
T Consensus       177 ~------------------------------~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~  226 (322)
T 2fp8_A          177 T------------------------------TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV  226 (322)
T ss_dssp             E------------------------------EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred             E------------------------------EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence            1                              1111112334678999765 46555 556899999987521  11111 


Q ss_pred             ECCeeeEEEEECCCCCEEEEeeC----------CCcEEEEcCCCCCcceEEEEeccc----cCcEEEEEECCCCCCEEEE
Q psy2107         313 VGNKSFFDVHYSPLSKLVITASA----------DKQIRLYDPKVKEGAIVKSTFSSH----KEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       313 ~~~~~i~~~~~~p~~~~l~~g~~----------dg~i~iwd~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s  378 (391)
                      .... ...+++.++|++.++...          .+.|..+|.. ++   ....+...    ...++++++.  +++++++
T Consensus       227 ~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~---~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~  299 (322)
T 2fp8_A          227 KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GN---ILEVIPLPPPFAGEHFEQIQEH--DGLLYIG  299 (322)
T ss_dssp             ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SC---EEEEEECCTTTTTSCCCEEEEE--TTEEEEE
T ss_pred             eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CC---EEEEEECCCCCccccceEEEEe--CCEEEEe
Confidence            2223 677999999987766544          4678888864 33   33333322    2356777773  5677777


Q ss_pred             eeCCCcEEEEec
Q psy2107         379 ASFDNSVKLWDL  390 (391)
Q Consensus       379 ~~~dg~v~iwdl  390 (391)
                      ....+.|.++++
T Consensus       300 ~~~~~~i~~~~~  311 (322)
T 2fp8_A          300 TLFHGSVGILVY  311 (322)
T ss_dssp             CSSCSEEEEEEC
T ss_pred             ecCCCceEEEec
Confidence            777888998876

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.67  E-value=7.1e-06  Score=74.44  Aligned_cols=93  Identities=13%  Similarity=0.123  Sum_probs=68.6

Q ss_pred             CeEEEEeccc--Cce-eEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCC---------cceEEEEeccccCc
Q psy2107         296 HTLKIWDAEL--GGM-KSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKE---------GAIVKSTFSSHKEW  362 (391)
Q Consensus       296 g~i~iwd~~~--~~~-~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~  362 (391)
                      +.|.+.|.++  ++. +..+.......++.++|||+++++++ .+..|.++|+.+.+         ......... -...
T Consensus       254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~g  332 (595)
T 1fwx_A          254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLG  332 (595)
T ss_dssp             TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSC
T ss_pred             CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCC
Confidence            4589999988  555 66776666778899999999776654 67899999987431         011233332 2345


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ...++|+|++ +..++.-.|+.|.+||+
T Consensus       333 P~h~aF~~dG-~aY~t~~ldsqV~kwdi  359 (595)
T 1fwx_A          333 PLHTAFDGRG-NAYTSLFLDSQVVKWNI  359 (595)
T ss_dssp             EEEEEECTTS-EEEEEETTTTEEEEEEH
T ss_pred             cceEEECCCC-eEEEEEecCCcEEEEEh
Confidence            8999999955 77788889999999996

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.66  E-value=3.9e-05  Score=62.21  Aligned_cols=179  Identities=11%  Similarity=0.078  Sum_probs=116.9

Q ss_pred             eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         158 VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       158 v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      ...+.|   + ++.++.+.+.+|.|+++|+...  ...... +.. ...-..+++..+ ++.+..-.++.+.+||..+.+
T Consensus        57 tqGL~~---~-~~~Ly~stG~~g~v~~iD~~Tg--kv~~~~-l~~-~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~  127 (268)
T 3nok_A           57 TQGLVF---H-QGHFFESTGHQGTLRQLSLESA--QPVWME-RLG-NIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQ  127 (268)
T ss_dssp             EEEEEE---E-TTEEEEEETTTTEEEECCSSCS--SCSEEE-ECT-TCCEEEEEECSS-CEEEEESSSCEEEEEETTTTE
T ss_pred             cceEEE---E-CCEEEEEcCCCCEEEEEECCCC--cEEeEE-CCC-CcceeEEEEeCC-EEEEEEccCCEEEEEECCcCc
Confidence            367888   3 3677888888899999996533  222222 332 112234555543 444455578899999998733


Q ss_pred             CCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-
Q psy2107         238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-  316 (391)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-  316 (391)
                                                   .+.++..... -..+++. ++.|+.+..++.|.++|..+.+.+.++.... 
T Consensus       128 -----------------------------~~~ti~~~~e-GwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~  176 (268)
T 3nok_A          128 -----------------------------RERTTRYSGE-GWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR  176 (268)
T ss_dssp             -----------------------------EEEEEECSSC-CCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred             -----------------------------EEEEEeCCCc-eeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence                                         4444443222 2345543 4667777779999999999999888876532 


Q ss_pred             -----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEECCCCCCEEEE
Q psy2107         317 -----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       317 -----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~l~s  378 (391)
                           .++.+.|. +|+..+....++.|.+.|+++++   ++..+.-             -....+.|||+|++.++++|
T Consensus       177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~---V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT  252 (268)
T 3nok_A          177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT---VVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT  252 (268)
T ss_dssp             TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB---EEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred             CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc---EEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence                 34567776 67655555568899999998877   4444332             12367999999987888887


Q ss_pred             ee
Q psy2107         379 AS  380 (391)
Q Consensus       379 ~~  380 (391)
                      |-
T Consensus       253 GK  254 (268)
T 3nok_A          253 GK  254 (268)
T ss_dssp             ET
T ss_pred             CC
Confidence            74

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=98.66  E-value=7e-05  Score=63.54  Aligned_cols=233  Identities=9%  Similarity=0.027  Sum_probs=128.2

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCc--EEEEeecCCCCc
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQT--AMIWEWKVESNS  193 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~--v~iwd~~~~~~~  193 (391)
                      ....++++  ++++++-..++.|..||.++....... .......+++   +++++++++......  |..++  ..+..
T Consensus        33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~---~~dG~l~vad~~~~~~~v~~~d--~~~g~  106 (306)
T 2p4o_A           33 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAF---TSNGDLVATGWNADSIPVVSLV--KSDGT  106 (306)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEE---CTTSCEEEEEECTTSCEEEEEE--CTTSC
T ss_pred             CcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEE---cCCCcEEEEeccCCcceEEEEc--CCCCe
Confidence            45678886  566666668899999998775544332 3456888998   777876666544333  54455  33333


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      ...+.... .......++..+++..+++-..++.|..+|..++.....           .....    .......    .
T Consensus       107 ~~~~~~~~-~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~-----------~~~~~----~~~~~~~----~  166 (306)
T 2p4o_A          107 VETLLTLP-DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW-----------LEHPM----LARSNSE----S  166 (306)
T ss_dssp             EEEEEECT-TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE-----------EECGG----GSCSSTT----C
T ss_pred             EEEEEeCC-CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEE-----------EECCc----ccccccc----C
Confidence            33333221 223345555556555455544688888888754210000           00000    0000000    0


Q ss_pred             ccCcccEEEecc-CCeEEEE-ECCCeEEEEeccc-Cce--eEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         274 HKEAISAVQWTA-VDEIITS-SWDHTLKIWDAEL-GGM--KSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       274 ~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .-.....+  ++ ++.++.+ ...+.|..||+.. ++.  ...+........++++++|+++++....+.|.++|.. ++
T Consensus       167 ~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~  243 (306)
T 2p4o_A          167 VFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS  243 (306)
T ss_dssp             CSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred             CCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence            00112234  43 3455444 5678999999874 332  1222212345668899999988877778899999974 32


Q ss_pred             cceEEEEeccccCcEEEEEEC---CCCCCEEEEee
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWS---PIDPQLFVSAS  380 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~---~~~~~~l~s~~  380 (391)
                       ...+.........+++++|.   |+++.++++..
T Consensus       244 -~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~  277 (306)
T 2p4o_A          244 -TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN  277 (306)
T ss_dssp             -EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred             -EEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence             11122233333568999998   75566666554

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.66  E-value=0.00011  Score=71.10  Aligned_cols=238  Identities=10%  Similarity=0.085  Sum_probs=146.7

Q ss_pred             CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--------CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--------HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ...|.++..+ ...+..|+.++-+.+||........+..        ....|.++..   +.++.+ ..|+.+ .|.+|+
T Consensus       214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~---d~~g~l-Wigt~~-Gl~~~~  288 (795)
T 4a2l_A          214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAM---DSQNRL-WIGTFN-DLNIYH  288 (795)
T ss_dssp             CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEE---CTTSCE-EEEESS-CEEEEE
T ss_pred             CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEE---cCCCCE-EEEeCC-hhheEc
Confidence            4578888876 4556667655458889986655544331        1356888887   656654 445555 588888


Q ss_pred             ecCCCCceeEEEEE-----ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         187 WKVESNSIECIHVC-----RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       187 ~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      ..  ..........     .-....|.++...++|. |..|+.++-|..|+..+.....                  +..
T Consensus       289 ~~--~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~------------------~~~  347 (795)
T 4a2l_A          289 EG--TDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKN------------------IRN  347 (795)
T ss_dssp             TT--TTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEE------------------ECC
T ss_pred             CC--CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceE------------------EcC
Confidence            32  2222211100     01235799999999887 6677777789889875432100                  000


Q ss_pred             CCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---------CCeeeEEEEECCCCCEEEE
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---------GNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---------~~~~i~~~~~~p~~~~l~~  332 (391)
                         . .. .-......|.++...+++.|..|+.++-|..||..++.......         ....|.++...++++.|..
T Consensus       348 ---~-~~-~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi  422 (795)
T 4a2l_A          348 ---I-PY-KNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI  422 (795)
T ss_dssp             ---C-TT-SSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE
T ss_pred             ---C-CC-CCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE
Confidence               0 00 00012456888888888889999999889999988765433221         1246888988888885666


Q ss_pred             eeCCCcEEEEcCCCCCcceEEEEec----cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         333 ASADKQIRLYDPKVKEGAIVKSTFS----SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       333 g~~dg~i~iwd~~~~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |+.++.|..||..++.   ......    .....|.++...+ ++.+.+ |+.+ -+.+||.
T Consensus       423 gt~~~Gl~~~d~~~~~---~~~~~~~~~~l~~~~v~~i~~d~-~g~lwi-gt~~-Gl~~~~~  478 (795)
T 4a2l_A          423 GTHAGGLSILHRNSGQ---VENFNQRNSQLVNENVYAILPDG-EGNLWL-GTLS-ALVRFNP  478 (795)
T ss_dssp             EETTTEEEEEETTTCC---EEEECTTTSCCSCSCEEEEEECS-SSCEEE-EESS-CEEEEET
T ss_pred             EeCcCceeEEeCCCCc---EEEeecCCCCcCCCeeEEEEECC-CCCEEE-EecC-ceeEEeC
Confidence            7777789999987654   222211    1345799999888 445444 3344 4666664

>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*

Probab=98.64  E-value=2.3e-05  Score=64.29  Aligned_cols=189  Identities=8%  Similarity=0.053  Sum_probs=122.4

Q ss_pred             cEEEEEecC-CEEEEEEC---CCeEEEEcC-CCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         118 WVSAIDFHN-DWILTGCY---DHSVHIWTR-RGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       118 ~V~~~~~~~-~~l~t~~~---dg~i~iwd~-~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      ....++|++ ..|+.++.   ++.|+++|+ +++.+..+.- .......+++   . .+.+.++.-.++.+.++|..   
T Consensus        22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~---~-g~~lyv~t~~~~~v~viD~~---   94 (266)
T 2iwa_A           22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL---L-NEKLYQVVWLKNIGFIYDRR---   94 (266)
T ss_dssp             CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE---E-TTEEEEEETTCSEEEEEETT---
T ss_pred             CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE---e-CCEEEEEEecCCEEEEEECC---
Confidence            357889986 55555543   589999999 5555555432 1112234555   2 23455556678999999943   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       +.+.+..+......  ...++++++.++++..++.|.++|..+.+                             ....+
T Consensus        95 -t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-----------------------------v~~~I  142 (266)
T 2iwa_A           95 -TLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK-----------------------------LIKKH  142 (266)
T ss_dssp             -TTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC-----------------------------EEEEE
T ss_pred             -CCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc-----------------------------EEEEE
Confidence             44556666432111  23355577767666678899999987633                             23333


Q ss_pred             cC--ccC---cccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCC-EE
Q psy2107         272 KG--HKE---AISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSK-LV  330 (391)
Q Consensus       272 ~~--~~~---~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~-~l  330 (391)
                      .-  ...   ....+.|. ++.+++.. .++.|.+.|..+++.+..+...              .....++|+|+++ ++
T Consensus       143 ~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lf  221 (266)
T 2iwa_A          143 NVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIF  221 (266)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred             EECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEE
Confidence            21  111   24567777 46766665 5789999999999999998753              2457899999976 55


Q ss_pred             EEeeCCCcEEEEcCCC
Q psy2107         331 ITASADKQIRLYDPKV  346 (391)
Q Consensus       331 ~~g~~dg~i~iwd~~~  346 (391)
                      +++...+.+.+.++..
T Consensus       222 VTgk~~~~v~~i~l~~  237 (266)
T 2iwa_A          222 VTGKLWPKLFEIKLHL  237 (266)
T ss_dssp             EEETTCSEEEEEEEEE
T ss_pred             EECCCCCeEEEEEEec
Confidence            5666778888888654

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.60  E-value=5.9e-05  Score=60.56  Aligned_cols=184  Identities=9%  Similarity=0.046  Sum_probs=115.5

Q ss_pred             CCCC--CeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeEEEEEecCCCC-eEEEEEcCCCCEEEEEeCCCc
Q psy2107         153 GHGG--PVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIECIHVCRGHERG-LETVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       153 ~~~~--~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~  227 (391)
                      .|..  -...+.|   ++ +.++.+.+.+|  .|+.+|+.  ++  +.+....-.... -..+++.. +++....-.++.
T Consensus        16 phd~~~ftqGL~~---~~-~~LyestG~~g~S~v~~vD~~--tg--kv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~   86 (243)
T 3mbr_X           16 PHDTTAFTEGLFY---LR-GHLYESTGETGRSSVRKVDLE--TG--RILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHE   86 (243)
T ss_dssp             ECCTTCCEEEEEE---ET-TEEEEEECCTTSCEEEEEETT--TC--CEEEEEECCTTCCEEEEEEET-TEEEEEESSSSE
T ss_pred             CCCCccccccEEE---EC-CEEEEECCCCCCceEEEEECC--CC--CEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCE
Confidence            4554  3558888   43 56666666654  89999954  33  344444322221 13344442 334444556889


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      +.+||.++.+                             .+.++..... -..+++. ++.|+.+..++.|.++|..+.+
T Consensus        87 v~v~D~~tl~-----------------------------~~~ti~~~~~-Gwglt~d-g~~L~vSdgs~~l~~iDp~t~~  135 (243)
T 3mbr_X           87 GFVYDLATLT-----------------------------PRARFRYPGE-GWALTSD-DSHLYMSDGTAVIRKLDPDTLQ  135 (243)
T ss_dssp             EEEEETTTTE-----------------------------EEEEEECSSC-CCEEEEC-SSCEEEECSSSEEEEECTTTCC
T ss_pred             EEEEECCcCc-----------------------------EEEEEeCCCC-ceEEeeC-CCEEEEECCCCeEEEEeCCCCe
Confidence            9999997733                             4444443222 2455543 4567777778999999999999


Q ss_pred             eeEEEECCe------eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-------------ccCcEEEEEE
Q psy2107         308 MKSEIVGNK------SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-------------HKEWVQSVRW  368 (391)
Q Consensus       308 ~~~~~~~~~------~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~~~~  368 (391)
                      .+.++....      .++.+.+. +|+..+....+..|.+.|+++++   ++..+.-             -....+.|++
T Consensus       136 ~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~---V~~~idl~~l~~~~~~~~~~~~~vlNGIA~  211 (243)
T 3mbr_X          136 QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK---VVAWIDLQALVPDADALTDSTNDVLNGIAF  211 (243)
T ss_dssp             EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB---EEEEEECGGGSTTTTSCCCTTSSCEEEEEE
T ss_pred             EEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC---EEEEEECCcCccccccccCCcCCceEEEEE
Confidence            888876532      34556665 56655555567899999999877   4444331             1236799999


Q ss_pred             CCCCCCEEEEee
Q psy2107         369 SPIDPQLFVSAS  380 (391)
Q Consensus       369 ~~~~~~~l~s~~  380 (391)
                      +|+..++++||-
T Consensus       212 d~~~~~lfVTGK  223 (243)
T 3mbr_X          212 DAEHDRLFVTGK  223 (243)
T ss_dssp             ETTTTEEEEEET
T ss_pred             cCCCCEEEEECC
Confidence            997777777763

>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1

Probab=98.60  E-value=7.1e-05  Score=62.07  Aligned_cols=220  Identities=8%  Similarity=0.027  Sum_probs=128.2

Q ss_pred             EEEEEECCCeEEEEcCCCceEE------eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         128 WILTGCYDHSVHIWTRRGEHKL------NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~~~~------~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      +|+.+.. +.|+.+++++....      .+.........++|.|.  .+.++++-..++.|..++.+  .....  ....
T Consensus         3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~--~~~ly~~d~~~~~I~~~~~~--g~~~~--~~~~   75 (267)
T 1npe_A            3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV--DKVVYWTDISEPSIGRASLH--GGEPT--TIIR   75 (267)
T ss_dssp             EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETT--TTEEEEEETTTTEEEEEESS--SCCCE--EEEC
T ss_pred             EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecC--CCEEEEEECCCCEEEEEecC--CCCcE--EEEE
Confidence            3444443 47888887554321      11111234678888332  45566666677899999854  22221  2222


Q ss_pred             cCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107         202 GHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA  280 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  280 (391)
                      ........+++++++..|+ +-...+.|.+++.+....                             .............
T Consensus        76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-----------------------------~~~~~~~~~~P~~  126 (267)
T 1npe_A           76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-----------------------------RVLFDTGLVNPRG  126 (267)
T ss_dssp             TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------------------------EEEECSSCSSEEE
T ss_pred             CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-----------------------------EEEEECCCCCccE
Confidence            2235678999999755554 445567899998854110                             1111111134578


Q ss_pred             EEecc-CCeEEEEEC---CCeEEEEecccCceeEEEE-C-CeeeEEEEECCCCCEEEE-eeCCCcEEEEcCCCCCcceEE
Q psy2107         281 VQWTA-VDEIITSSW---DHTLKIWDAELGGMKSEIV-G-NKSFFDVHYSPLSKLVIT-ASADKQIRLYDPKVKEGAIVK  353 (391)
Q Consensus       281 ~~~~~-~~~l~s~~~---dg~i~iwd~~~~~~~~~~~-~-~~~i~~~~~~p~~~~l~~-g~~dg~i~iwd~~~~~~~~~~  353 (391)
                      +++++ ++.++.+..   .+.|..+++.. .....+. . -.....++++|++..|.. -...+.|.++|+....   ..
T Consensus       127 i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~---~~  202 (267)
T 1npe_A          127 IVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG---RR  202 (267)
T ss_dssp             EEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE---EE
T ss_pred             EEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc---eE
Confidence            88886 677766654   36888888753 3333332 2 235678999998765554 4456899999986432   22


Q ss_pred             EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         354 STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       354 ~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ..... ......++..  ++.++++....+.|.++|.
T Consensus       203 ~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~  236 (267)
T 1npe_A          203 KVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL  236 (267)
T ss_dssp             EEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred             EEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence            22222 2335677653  5566666666788888875

>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1

Probab=98.57  E-value=5.6e-06  Score=71.77  Aligned_cols=231  Identities=10%  Similarity=-0.015  Sum_probs=131.2

Q ss_pred             EEEec--CCEEEEEE----------CCCeEEEEcC-CCceEEeccCC-------CCCeeEEEEEecCCCCeEEEEEeC--
Q psy2107         121 AIDFH--NDWILTGC----------YDHSVHIWTR-RGEHKLNIPGH-------GGPVKGVAWLYNDGKDAAFISVST--  178 (391)
Q Consensus       121 ~~~~~--~~~l~t~~----------~dg~i~iwd~-~~~~~~~~~~~-------~~~v~~l~~~~~~~~~~~l~s~~~--  178 (391)
                      .+.++  +++++++.          .++.|.+||. +.+.+.++.-.       ......+++   ++++++++.+..  
T Consensus        69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~---SpDGk~lyVan~~~  145 (368)
T 1mda_H           69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN---CASSACLLFFLFGS  145 (368)
T ss_dssp             EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE---CTTSSCEEEEECSS
T ss_pred             ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEE---cCCCCEEEEEccCC
Confidence            46776  66666665          3789999999 55555565422       123557888   888988888875  


Q ss_pred             CCcEEE--EeecCCCCceeEEEEEecCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCC-----CCCCCC----CCCCC
Q psy2107         179 DQTAMI--WEWKVESNSIECIHVCRGHERGLETVTVSESR-QQFATGGWDCLLKIWSADI-----SKERGD----PSENG  246 (391)
Q Consensus       179 dg~v~i--wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~-----~~~~~~----~~~~~  246 (391)
                      +..+.+  +|...       +..+... +.   ..+.|++ ..+++.+.||.+.+.|+.+     ++....    .....
T Consensus       146 ~~~v~V~~iD~~t-------v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~  214 (368)
T 1mda_H          146 SAAAGLSVPGASD-------DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS  214 (368)
T ss_dssp             SCEEEEEETTTEE-------EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS
T ss_pred             CCeEEEEEEchhh-------ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC
Confidence            467888  88431       2333211 11   1123433 3455667788888888876     332210    00000


Q ss_pred             CCCccccccccccccCC---------CC--CceeeecC----------ccCcccEEEeccC-CeEEEEEC---------C
Q psy2107         247 DEGTTSKKRKKEYSSAS---------SR--TPLITLKG----------HKEAISAVQWTAV-DEIITSSW---------D  295 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~----------~~~~v~~~~~~~~-~~l~s~~~---------d  295 (391)
                      .+. ........++...         ..  +.+..+..          .......+.++++ ++++.+..         +
T Consensus       215 ~P~-~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~  293 (368)
T 1mda_H          215 QAA-QANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA  293 (368)
T ss_dssp             CCE-EETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred             Ccc-ccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence            000 0000000000000         00  00000100          0111223678854 55665432         2


Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCC-EEEEee-CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK-LVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~-~l~~g~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      +.+.++|+.+.+.+.++........++|+|+|+ ++++.. .++.|.++|+.+.+   .+..+..... ...+++.+
T Consensus       294 ~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k---vv~~I~vg~~-P~~i~~~~  366 (368)
T 1mda_H          294 ENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ---DQSSVELDKG-PESLSVQN  366 (368)
T ss_dssp             EEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE---EEEECCCCSC-CCEEECCC
T ss_pred             CCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc---EEEEEECCCC-CCEEEeec
Confidence            456699999999999888777899999999998 455666 58999999998876   6667664433 45666653

>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*

Probab=98.56  E-value=0.00018  Score=69.71  Aligned_cols=237  Identities=8%  Similarity=0.105  Sum_probs=145.0

Q ss_pred             CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--------CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--------HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ...|.++..+ ...|..|+.+| |.+||........+..        ....|.++..   +.++. +..|+.++.|..|+
T Consensus       262 ~~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~---D~~g~-lWigt~~~Gl~~~~  336 (795)
T 4a2l_A          262 SNYIRSLAMDSQNRLWIGTFND-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFM---DSQGG-MWLGTYFGGLNYYH  336 (795)
T ss_dssp             CSBEEEEEECTTSCEEEEESSC-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEE---CTTSC-EEEEESSSCEEEEC
T ss_pred             CCeEEEEEEcCCCCEEEEeCCh-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEE---eCCcC-EEEEECCCCeEEeC
Confidence            4579999887 34555666664 8889986655554421        2356888887   66665 56677778898888


Q ss_pred             ecCCCCceeEEEEEe----cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         187 WKVESNSIECIHVCR----GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~----~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ..  ...........    -....|.++...++++ |..|+.++-|..|+..++....-.                    
T Consensus       337 ~~--~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~--------------------  393 (795)
T 4a2l_A          337 PI--RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYT--------------------  393 (795)
T ss_dssp             GG--GGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEEC--------------------
T ss_pred             CC--cccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEe--------------------
Confidence            43  22222211110    0235699999998887 666888878999988653210000                    


Q ss_pred             CCCCceeee-cCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEE-----CCeeeEEEEECCCCCEEEEeeC
Q psy2107         263 SSRTPLITL-KGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIV-----GNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       263 ~~~~~~~~~-~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~-----~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                        ......- ......|.++...+++. |..|+.++-|..||..+++......     ....|.++...++|.+.+.. .
T Consensus       394 --~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~  470 (795)
T 4a2l_A          394 --LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L  470 (795)
T ss_dssp             --CC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S
T ss_pred             --cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c
Confidence              0000000 01235688888877777 8999988889999988776433221     13468889988888766544 4


Q ss_pred             CCcEEEEcCCCCCcceEEEEec------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFS------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       +.+.+||..+..   ......      -....|.++...+ ++.+.+ |+. +-+..||.
T Consensus       471 -~Gl~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lWi-gt~-~Gl~~~~~  524 (795)
T 4a2l_A          471 -SALVRFNPEQRS---FTTIEKEKDGTPVVSKQITTLFRDS-HKRLWI-GGE-EGLSVFKQ  524 (795)
T ss_dssp             -SCEEEEETTTTE---EEECCBCTTCCBCCCCCEEEEEECT-TCCEEE-EES-SCEEEEEE
T ss_pred             -CceeEEeCCCCe---EEEccccccccccCCceEEEEEECC-CCCEEE-EeC-CceEEEeC
Confidence             458889976543   221111      1235799999988 444444 333 45666663

>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A

Probab=98.55  E-value=2.9e-05  Score=62.95  Aligned_cols=176  Identities=13%  Similarity=0.172  Sum_probs=111.4

Q ss_pred             cEEEEEecCC-EEEEEECCC--eEEEEcC-CCceEEeccCCCCCeeE--EEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         118 WVSAIDFHND-WILTGCYDH--SVHIWTR-RGEHKLNIPGHGGPVKG--VAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       118 ~V~~~~~~~~-~l~t~~~dg--~i~iwd~-~~~~~~~~~~~~~~v~~--l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      ....+.|+++ ++.+.+.+|  .|+++|+ +++.+..+.- ......  ++.   . .+.+.++.-.++.+.+||..   
T Consensus        44 ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~---~-g~~ly~ltw~~~~v~v~D~~---  115 (262)
T 3nol_A           44 FTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISD---W-KDKIVGLTWKNGLGFVWNIR---  115 (262)
T ss_dssp             EEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEE---E-TTEEEEEESSSSEEEEEETT---
T ss_pred             ccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEE---e-CCEEEEEEeeCCEEEEEECc---
Confidence            3577888855 455555555  8999999 4555555543 233333  444   2 23445555568999999943   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       +.+.+.++....   ....+.++++.|+....++.|.++|..+.+                             .+..+
T Consensus       116 -t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~-----------------------------v~~~I  162 (262)
T 3nol_A          116 -NLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLT-----------------------------PVRTI  162 (262)
T ss_dssp             -TCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCS-----------------------------EEEEE
T ss_pred             -cCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCe-----------------------------EEEEE
Confidence             445666665322   222333566667666667889999987743                             33333


Q ss_pred             cC--cc---CcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC-------------eeeEEEEECCCCCEEEE
Q psy2107         272 KG--HK---EAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN-------------KSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       272 ~~--~~---~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-------------~~i~~~~~~p~~~~l~~  332 (391)
                      ..  ..   ..++.+.|. ++.+++.. .+..|.+.|.++++.+..+...             ...+.++++|+++.|.+
T Consensus       163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV  241 (262)
T 3nol_A          163 TVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV  241 (262)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred             EeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence            22  12   223446676 45666665 5889999999999999988753             24578999998876666


Q ss_pred             eeC
Q psy2107         333 ASA  335 (391)
Q Consensus       333 g~~  335 (391)
                      .+.
T Consensus       242 TGK  244 (262)
T 3nol_A          242 TGK  244 (262)
T ss_dssp             EET
T ss_pred             ECC
Confidence            553

>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}

Probab=98.54  E-value=3e-05  Score=62.84  Aligned_cols=174  Identities=11%  Similarity=0.076  Sum_probs=112.4

Q ss_pred             cEEEEEecCC-EEEEEECCCeEEEEcC-CCceEEeccCCCCCee--EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCc
Q psy2107         118 WVSAIDFHND-WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVK--GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNS  193 (391)
Q Consensus       118 ~V~~~~~~~~-~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~--~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~  193 (391)
                      ....+.|+++ ++.+.+.+|.|+++|+ +++.+..+  -.....  .+++   .. +.+.++...++.+.+||..    +
T Consensus        56 ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~---~g-~~Ly~ltw~~~~v~V~D~~----T  125 (268)
T 3nok_A           56 FTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLAS---DG-ERLYQLTWTEGLLFTWSGM----P  125 (268)
T ss_dssp             CEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEE---CS-SCEEEEESSSCEEEEEETT----T
T ss_pred             ccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEE---eC-CEEEEEEccCCEEEEEECC----c
Confidence            4568888866 5666667789999999 45555444  223333  3555   32 3455556678999999943    4


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      .+.+.++..... -..++  ++++.|+.+..++.|.++|..+.+.                             +..+.-
T Consensus       126 l~~~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v-----------------------------~~~I~V  173 (268)
T 3nok_A          126 PQRERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDGFAL-----------------------------VGAVQV  173 (268)
T ss_dssp             TEEEEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTTCCE-----------------------------EEEEEC
T ss_pred             CcEEEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCCCeE-----------------------------EEEEEe
Confidence            566666654222 23344  5677777777789999999877443                             333221


Q ss_pred             --ccC---cccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCCEEEEe
Q psy2107         274 --HKE---AISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSKLVITA  333 (391)
Q Consensus       274 --~~~---~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~~l~~g  333 (391)
                        +..   .++.+.|.. +.+++.. .+..|.+.|.++++.+..+...              .-.+.++++|+++.|++.
T Consensus       174 ~~~g~~v~~lNeLe~~d-G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT  252 (268)
T 3nok_A          174 KLRGQPVELINELECAN-GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT  252 (268)
T ss_dssp             EETTEECCCEEEEEEET-TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred             CCCCcccccccccEEeC-CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence              222   335567764 5666665 5789999999999999888753              245789999986644444


Q ss_pred             e
Q psy2107         334 S  334 (391)
Q Consensus       334 ~  334 (391)
                      +
T Consensus       253 G  253 (268)
T 3nok_A          253 G  253 (268)
T ss_dssp             E
T ss_pred             C
Confidence            3

>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}

Probab=98.49  E-value=0.00016  Score=58.02  Aligned_cols=175  Identities=9%  Similarity=0.118  Sum_probs=110.4

Q ss_pred             cEEEEEecCCEEEEE-ECC--CeEEEEcC-CCceEEeccCCCCCe--eEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         118 WVSAIDFHNDWILTG-CYD--HSVHIWTR-RGEHKLNIPGHGGPV--KGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~-~~d--g~i~iwd~-~~~~~~~~~~~~~~v--~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      ....+.|+++.|..+ +.+  +.|+.+|+ +++.+....- ....  ..++.   . .+.+....-.++.+.+||..   
T Consensus        22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-~~~~fgeGi~~---~-~~~ly~ltw~~~~v~v~D~~---   93 (243)
T 3mbr_X           22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEV-PPPYFGAGIVA---W-RDRLIQLTWRNHEGFVYDLA---   93 (243)
T ss_dssp             CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEEC-CTTCCEEEEEE---E-TTEEEEEESSSSEEEEEETT---
T ss_pred             ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeC-CCCcceeEEEE---e-CCEEEEEEeeCCEEEEEECC---
Confidence            466889987755544 443  49999999 4555554432 2222  23444   2 34555556678999999943   


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                       +.+.+.++...... ..++  +++..|+.+..++.|.++|..+.+                             .+..+
T Consensus        94 -tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~-----------------------------~~~~I  140 (243)
T 3mbr_X           94 -TLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQ-----------------------------QVGSI  140 (243)
T ss_dssp             -TTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCC-----------------------------EEEEE
T ss_pred             -cCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCe-----------------------------EEEEE
Confidence             55666666643322 3444  456666666678899999987743                             23333


Q ss_pred             cC--cc---CcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEEEECC--------------eeeEEEEECCCCCEEE
Q psy2107         272 KG--HK---EAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSEIVGN--------------KSFFDVHYSPLSKLVI  331 (391)
Q Consensus       272 ~~--~~---~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~--------------~~i~~~~~~p~~~~l~  331 (391)
                      .-  +.   ..++.+.|. ++.+++.. .+..|.+.|.++++.+..+...              .-.+.++++|+++.|.
T Consensus       141 ~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf  219 (243)
T 3mbr_X          141 KVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF  219 (243)
T ss_dssp             ECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred             EEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence            21  22   233455655 45666655 5789999999999999888732              2457899999877655


Q ss_pred             Eee
Q psy2107         332 TAS  334 (391)
Q Consensus       332 ~g~  334 (391)
                      +.+
T Consensus       220 VTG  222 (243)
T 3mbr_X          220 VTG  222 (243)
T ss_dssp             EEE
T ss_pred             EEC
Confidence            554

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=98.48  E-value=0.00023  Score=60.97  Aligned_cols=232  Identities=9%  Similarity=0.018  Sum_probs=128.4

Q ss_pred             CCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEecc---CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         116 DDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       116 ~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ...+.++.|+++.++.++.+|.|..-.=.++.-....   .+.+.+..+.+.+   ++..++++ .+|.|..-.  ....
T Consensus        79 ~~~~~~i~~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~---~~~~~~~~-~~g~v~~S~--DgG~  152 (327)
T 2xbg_A           79 DYRFNSVSFQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALG---NGSAEMIT-NVGAIYRTK--DSGK  152 (327)
T ss_dssp             CCEEEEEEEETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEEEEEEEE---TTEEEEEE-TTCCEEEES--STTS
T ss_pred             CccEEEEEecCCeEEEEECCCeEEEECCCCCCceECccccCCCCCeEEEEEEC---CCCEEEEe-CCccEEEEc--CCCC
Confidence            4478899998665555666776554321222212111   2345577777743   45555544 566543321  2233


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE-EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI-WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL  271 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (391)
                      .+..+.  ......+..+++.+++.+++.+. +|.+.. +|-. +..                          ...+  -
T Consensus       153 tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~g-G~t--------------------------W~~~--~  200 (327)
T 2xbg_A          153 NWQALV--QEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPG-QTA--------------------------WEPH--N  200 (327)
T ss_dssp             SEEEEE--CSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTT-CSS--------------------------CEEE--E
T ss_pred             CCEEee--cCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCC-CCc--------------------------eeEC--C
Confidence            444432  34556789999999988776654 454443 3320 110                          1111  1


Q ss_pred             cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-----CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         272 KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-----NKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       272 ~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ......+..+.+.+++.++.++.+|.+++.+...++.-..+..     ...+.++++.+++.+++++. ++.|. +....
T Consensus       201 ~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i~-~S~Dg  278 (327)
T 2xbg_A          201 RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGALL-CSQDG  278 (327)
T ss_dssp             CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCEE-EESST
T ss_pred             CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeEE-EeCCC
Confidence            1234567788888778888888889888764222332222221     13578899998888777665 67663 33333


Q ss_pred             CCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         347 KEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       347 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +...............+.++.|.+ ++ .++.++.+|.|.-++
T Consensus       279 G~tW~~~~~~~~~~~~~~~v~~~~-~~-~~~~~G~~G~i~~~~  319 (327)
T 2xbg_A          279 GQTWQQDVDVKKVPSNFYKILFFS-PD-QGFILGQKGILLRYV  319 (327)
T ss_dssp             TSSCEECGGGTTSSSCCCEEEEEE-TT-EEEEECSTTEEEEEC
T ss_pred             CcccEEcCccCCCCCCeEEEEEEC-CC-ceEEEcCCceEEEEc
Confidence            332221111112335678888875 44 466777889877654

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.46  E-value=0.00026  Score=68.46  Aligned_cols=237  Identities=7%  Similarity=-0.019  Sum_probs=140.9

Q ss_pred             CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEecc---------------CCCCCeeEEEEEecCCCCeEEEEEeCC
Q psy2107         116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIP---------------GHGGPVKGVAWLYNDGKDAAFISVSTD  179 (391)
Q Consensus       116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~---------------~~~~~v~~l~~~~~~~~~~~l~s~~~d  179 (391)
                      ...|.++..+ ...|..|+..+-|.++|........+.               -....|.++..   +.++. |..|+.+
T Consensus       257 ~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~---D~~g~-lWigt~~  332 (781)
T 3v9f_A          257 SSYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ---DSFNN-IWIGTWG  332 (781)
T ss_dssp             CCCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE---CSSCC-EEEEEBS
T ss_pred             CceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE---eCCCC-EEEEecC
Confidence            3568898886 447777887556888887554333221               12456888877   55554 6667777


Q ss_pred             CcEEEEeecCCCCceeEEEEE-------ecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccc
Q psy2107         180 QTAMIWEWKVESNSIECIHVC-------RGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS  252 (391)
Q Consensus       180 g~v~iwd~~~~~~~~~~~~~~-------~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~  252 (391)
                      +.|..++..  ..........       ......|.++...+++. |..|+.++-|..||..++....            
T Consensus       333 ~Gl~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~------------  397 (781)
T 3v9f_A          333 GGINFISNA--PPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIY------------  397 (781)
T ss_dssp             SCEEEECSS--CCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEEC------------
T ss_pred             CeEEEeCCC--CCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEE------------
Confidence            788888843  2222222110       01235699999988876 5667766778889876432110            


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEE---CCeeeEEEEECCCCCE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV---GNKSFFDVHYSPLSKL  329 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~i~~~~~~p~~~~  329 (391)
                                    ...........|.++...+++.|..|+.++-+..+|..+++......   ....|.++...++|.+
T Consensus       398 --------------~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l  463 (781)
T 3v9f_A          398 --------------NKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKI  463 (781)
T ss_dssp             --------------C-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEE
T ss_pred             --------------ccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCE
Confidence                          00000123456888888877888889988889999987765432211   1347888888887765


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEec---cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFS---SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+ |+. +.|..||..+..-... ....   .....|.++...+ ++.+. .|+.++-+..||.
T Consensus       464 wi-gt~-~Gl~~~~~~~~~~~~~-~~~~~~~~~~~~i~~i~~d~-~g~lW-igt~~~Gl~~~~~  522 (781)
T 3v9f_A          464 WI-GTH-AGVFVIDLASKKVIHH-YDTSNSQLLENFVRSIAQDS-EGRFW-IGTFGGGVGIYTP  522 (781)
T ss_dssp             EE-EET-TEEEEEESSSSSCCEE-ECTTTSSCSCSCEEEEEECT-TCCEE-EEESSSCEEEECT
T ss_pred             EE-EEC-CceEEEeCCCCeEEec-ccCcccccccceeEEEEEcC-CCCEE-EEEcCCCEEEEeC
Confidence            54 444 5688999776442111 1111   1135799999988 44433 3444334555653

>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*

Probab=98.44  E-value=8.3e-05  Score=63.56  Aligned_cols=187  Identities=13%  Similarity=0.039  Sum_probs=109.3

Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-----------------CCCCeEEEEEcC-CCCE
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-----------------HERGLETVTVSE-SRQQ  218 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-----------------~~~~v~~l~~~~-~~~~  218 (391)
                      ...+++|   ++++.++.++..++.|..|+..  ............                 ....+..+++.+ +++ 
T Consensus        20 ~p~~i~~---d~~g~~l~v~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-   93 (322)
T 2fp8_A           20 APNSFTF---DSTNKGFYTSVQDGRVIKYEGP--NSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-   93 (322)
T ss_dssp             CCCCEEC---CTTCSSEEEECTTSEEEEECCT--TTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-
T ss_pred             CceEEEE---cCCCCEEEEEcCCCeEEEECCC--CCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-
Confidence            3456778   6677777888889999999843  222222111000                 013578899998 554 


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee-eecC-ccCcccEEEecc-CCeEEEEEC-
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI-TLKG-HKEAISAVQWTA-VDEIITSSW-  294 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~v~~~~~~~-~~~l~s~~~-  294 (391)
                      |+.+...+.|..+|..++...                           .+. ...+ .......+++.+ ++.++.+.. 
T Consensus        94 l~v~d~~~~i~~~d~~~g~~~---------------------------~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~  146 (322)
T 2fp8_A           94 LYIVDCYYHLSVVGSEGGHAT---------------------------QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVS  146 (322)
T ss_dssp             EEEEETTTEEEEECTTCEECE---------------------------EEESEETTEECSCEEEEEECTTTCCEEEEESC
T ss_pred             EEEEECCCCEEEEeCCCCEEE---------------------------EecccCCCCcccccceEEEecCCCEEEEECCc
Confidence            555555556888886542210                           000 0011 112356788888 777766653 


Q ss_pred             -----------------CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCc--ceEEE
Q psy2107         295 -----------------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEG--AIVKS  354 (391)
Q Consensus       295 -----------------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~--~~~~~  354 (391)
                                       ++.|..||..+++.......-.....++++|+++.|..+ +..+.|.+|++.....  .....
T Consensus       147 ~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~  226 (322)
T 2fp8_A          147 TLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV  226 (322)
T ss_dssp             SSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE
T ss_pred             ccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE
Confidence                             267888888766543332222345678999999866555 5568999999864221  11111


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                      .   ..+ ...+++.++ +++.++...
T Consensus       227 ~---~~g-P~gi~~d~~-G~l~va~~~  248 (322)
T 2fp8_A          227 K---IPN-PGNIKRNAD-GHFWVSSSE  248 (322)
T ss_dssp             E---CSS-EEEEEECTT-SCEEEEEEE
T ss_pred             e---CCC-CCCeEECCC-CCEEEEecC
Confidence            2   223 788999994 455555543

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=98.44  E-value=0.00058  Score=59.01  Aligned_cols=230  Identities=9%  Similarity=-0.017  Sum_probs=133.8

Q ss_pred             cEEEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         118 WVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       118 ~V~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      ..+|.+..++ +|+.+ ....|+..++.+.....+.........++|.+.  ++.++++-...+.|..++++  ......
T Consensus        35 ~~~C~~~~~~~~ll~~-~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~--~~~ly~~D~~~~~I~r~~~~--g~~~~~  109 (349)
T 3v64_C           35 RRSCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLN--GSNVEE  109 (349)
T ss_dssp             SSCEEESSSCCEEEEE-CBSCEEEECTTSCCEEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCSCEE
T ss_pred             CCcccccccCceeEee-cccceEEEeCCCCeeEEeecCCCceEEEEEecc--ccEEEEEeccCCceEEEecC--CCCceE
Confidence            3445555433 44433 345688888876555544444455789999432  55566666677888888743  322222


Q ss_pred             EEEEecCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         197 IHVCRGHERGLETVTVSESRQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                        ...........+++.+.+. ++++-...+.|.+.+++...                             ....+...-
T Consensus       110 --~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------------~~~l~~~~l  158 (349)
T 3v64_C          110 --VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------------RKVLLWQSL  158 (349)
T ss_dssp             --EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECTTC
T ss_pred             --EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-----------------------------eEEEEeCCC
Confidence              2222234567899987544 44555566789998886421                             111122222


Q ss_pred             CcccEEEecc-CCeEEEEEC-C-CeEEEEecccCceeEEEE--CCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCc
Q psy2107         276 EAISAVQWTA-VDEIITSSW-D-HTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEG  349 (391)
Q Consensus       276 ~~v~~~~~~~-~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~  349 (391)
                      .....++++| ++.++.+.. . +.|..+++... ....+.  .-.....++++|++..|..+ ...+.|..+|+.....
T Consensus       159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~  237 (349)
T 3v64_C          159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR  237 (349)
T ss_dssp             SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred             CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence            3457888885 566555543 3 67888877533 222322  12356789999876655544 4567899999865331


Q ss_pred             ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         350 AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       350 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .   ..+.........+++.  ++.++++-...+.|...|
T Consensus       238 ~---~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~  272 (349)
T 3v64_C          238 K---AVISQGLPHPFAITVF--EDSLYWTDWHTKSINSAN  272 (349)
T ss_dssp             E---EEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred             E---EEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEE
Confidence            1   1222234456788883  456666666667776665

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.43  E-value=1.3e-05  Score=75.76  Aligned_cols=226  Identities=10%  Similarity=0.049  Sum_probs=131.8

Q ss_pred             EecCCEEEEEECCCeEEEEcC-CCceEEeccCCC----CCeeE-EEEEecCCCCeEEEEEeC------CCcEEEEeecCC
Q psy2107         123 DFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHG----GPVKG-VAWLYNDGKDAAFISVST------DQTAMIWEWKVE  190 (391)
Q Consensus       123 ~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~----~~v~~-l~~~~~~~~~~~l~s~~~------dg~v~iwd~~~~  190 (391)
                      ++.++.++.++.||.|..+|. +++.+.......    ..+.+ ...    .++ .++.+..      +|.|..+|..  
T Consensus       114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v----~~~-~v~vg~~~~~~~~~g~v~a~D~~--  186 (668)
T 1kv9_A          114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV----VKG-KVIIGNGGAEYGVRGFVSAYDAD--  186 (668)
T ss_dssp             EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE----ETT-EEEECCBCTTTCCBCEEEEEETT--
T ss_pred             EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE----ECC-EEEEeCCCCCcCCCCEEEEEECC--
Confidence            445778889999999999998 677776654321    11111 111    033 3444432      5889999854  


Q ss_pred             CCceeEEEEEecC-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc------------
Q psy2107         191 SNSIECIHVCRGH-------------------------------ERGLETVTVSESRQQFATGGWDCL------------  227 (391)
Q Consensus       191 ~~~~~~~~~~~~~-------------------------------~~~v~~l~~~~~~~~l~sg~~dg~------------  227 (391)
                        +.+.+..+...                               ......+++.|...+++.++.++.            
T Consensus       187 --tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~g  264 (668)
T 1kv9_A          187 --TGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGG  264 (668)
T ss_dssp             --TCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCC
T ss_pred             --CCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCC
Confidence              33444444311                               011124688888888888877663            


Q ss_pred             -------EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC--cc-------CcccEEEeccCC----
Q psy2107         228 -------LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HK-------EAISAVQWTAVD----  287 (391)
Q Consensus       228 -------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~v~~~~~~~~~----  287 (391)
                             |..+|.++++..                             ..+..  |.       .+.....+..++    
T Consensus       265 d~l~~~~v~AlD~~tG~~~-----------------------------W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~  315 (668)
T 1kv9_A          265 DNLYLSSILAIRPDTGKLA-----------------------------WHYQVTPGDSWDFTATQQITLAELNIDGKPRK  315 (668)
T ss_dssp             CCTTTTEEEEECTTTCCEE-----------------------------EEEESSTTCCSCCCCCSCEEEEEEEETTEEEE
T ss_pred             CceeeeeEEEEcCCCCcee-----------------------------eEeecCCCccccccCCCCcEEEEeccCCcEEE
Confidence                   777887775532                             22211  11       111111111123    


Q ss_pred             eEEEEECCCeEEEEecccCceeEEEECCe-------------ee------------------------EEEEECCCCCEE
Q psy2107         288 EIITSSWDHTLKIWDAELGGMKSEIVGNK-------------SF------------------------FDVHYSPLSKLV  330 (391)
Q Consensus       288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------------~i------------------------~~~~~~p~~~~l  330 (391)
                      .++.++.+|.+.++|..+|+.+.......             ++                        ..++++|+..++
T Consensus       316 ~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~  395 (668)
T 1kv9_A          316 VLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLV  395 (668)
T ss_dssp             EEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEE
T ss_pred             EEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEE
Confidence            48888999999999999999885543221             01                        125677776655


Q ss_pred             EEe------------------------------------eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC
Q psy2107         331 ITA------------------------------------SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ  374 (391)
Q Consensus       331 ~~g------------------------------------~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~  374 (391)
                      ...                                    ..+|.|..||+.+++   .+.....+ .++....+.. .+.
T Consensus       396 yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~---~~W~~~~~-~~~~~~~~~t-~gg  470 (668)
T 1kv9_A          396 YIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK---AAWKVPYP-THWNGGTLST-AGN  470 (668)
T ss_dssp             EEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE---EEEEEEES-SSCCCCEEEE-TTT
T ss_pred             EEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc---EEEEccCC-CCCcCceeEe-CCC
Confidence            431                                    124789999998866   44333322 2233333333 344


Q ss_pred             EEEEeeCCCcEEEEecC
Q psy2107         375 LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       375 ~l~s~~~dg~v~iwdlr  391 (391)
                      +++.++.||.++.||.+
T Consensus       471 ~vf~g~~dg~l~a~d~~  487 (668)
T 1kv9_A          471 LVFQGTAAGQMHAYSAD  487 (668)
T ss_dssp             EEEEECTTSEEEEEETT
T ss_pred             EEEEECCcccchhhhhh
Confidence            68888999999999964

>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A

Probab=98.41  E-value=2.4e-05  Score=71.01  Aligned_cols=240  Identities=7%  Similarity=-0.015  Sum_probs=137.4

Q ss_pred             cCCEEEEEEC-CCeEEEEcCCCceEE---eccCCCCCeeEEEEEecC-CCCeEEEEEe------------------CCCc
Q psy2107         125 HNDWILTGCY-DHSVHIWTRRGEHKL---NIPGHGGPVKGVAWLYND-GKDAAFISVS------------------TDQT  181 (391)
Q Consensus       125 ~~~~l~t~~~-dg~i~iwd~~~~~~~---~~~~~~~~v~~l~~~~~~-~~~~~l~s~~------------------~dg~  181 (391)
                      +|++++.... ++.|.+.|+...++.   .++ .......+++.  + |++.++++++                  .++.
T Consensus       100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip-~g~~phg~~~~--~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~  176 (595)
T 1fwx_A          100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIP-NAKGIHGLRPQ--KWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV  176 (595)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEEECS-SCCSEEEEEEC--CSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred             CCCEEEEEcCCCCEEEEEECCCceEeeEEeCC-CCCCCcceeee--ecCCCcEEEEecccccccCCCCcccccccccCce
Confidence            4666666554 567999999665433   332 23456777763  2 5777777774                  2457


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC---------------cEEEEECCCCCCCCCCCCCC
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC---------------LLKIWSADISKERGDPSENG  246 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---------------~i~iwd~~~~~~~~~~~~~~  246 (391)
                      +.+.|..    +.+...++.--. ....++++|+|+++++.+.+.               .|.+.|.........   .+
T Consensus       177 vtvID~~----t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~---~G  248 (595)
T 1fwx_A          177 FTAVDAD----KWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA---AG  248 (595)
T ss_dssp             EEEEETT----TTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH---HT
T ss_pred             EEEEECC----CCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc---CC
Confidence            7888843    334444444212 356788999999999888653               356666433211000   00


Q ss_pred             CCCccccccccccccCCC--CCc-eeeecCccCcccEEEeccCCe--EEEEECCCeEEEEecccCc------------ee
Q psy2107         247 DEGTTSKKRKKEYSSASS--RTP-LITLKGHKEAISAVQWTAVDE--IITSSWDHTLKIWDAELGG------------MK  309 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~------------~~  309 (391)
                      ....   .......+...  .+. +..+.. .....++.++|++.  ++++..+.+|.++|+.+.+            ..
T Consensus       249 k~~~---i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~  324 (595)
T 1fwx_A          249 DYQE---LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV  324 (595)
T ss_dssp             CSEE---ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred             CeeE---ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence            0000   00011112222  222 333332 23457889998776  3344468899999998653            34


Q ss_pred             EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC-------CcceEEEEeccccCcE-----EEEEECCCCCCEEE
Q psy2107         310 SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK-------EGAIVKSTFSSHKEWV-----QSVRWSPIDPQLFV  377 (391)
Q Consensus       310 ~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~l~  377 (391)
                      ...........++|+|+|...++...|+.|.+||+...       +....+..+..|-.+-     .++.++| ++++|+
T Consensus       325 ~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~-DGk~l~  403 (595)
T 1fwx_A          325 AEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDA-TNDWLV  403 (595)
T ss_dssp             ECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTC-CSSEEE
T ss_pred             EEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCC-CCCEEE
Confidence            44455557889999999955556677999999998651       1123566666554321     1224578 445566


Q ss_pred             Eee
Q psy2107         378 SAS  380 (391)
Q Consensus       378 s~~  380 (391)
                      ++.
T Consensus       404 ~~N  406 (595)
T 1fwx_A          404 CLS  406 (595)
T ss_dssp             EEE
T ss_pred             EcC
Confidence            554

>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}

Probab=98.38  E-value=0.0009  Score=64.70  Aligned_cols=235  Identities=9%  Similarity=-0.001  Sum_probs=142.3

Q ss_pred             CCCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC----------CCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         115 HDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG----------HGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       115 h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~----------~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      ....|.++..+ ...|-.|+.++-|..++........+..          ....|.++..   +.++. |..|+.++.|.
T Consensus       311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~---d~~g~-lWigt~~~Gl~  386 (781)
T 3v9f_A          311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD---DGQGK-LWIGTDGGGIN  386 (781)
T ss_dssp             SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE---CTTSC-EEEEEBSSCEE
T ss_pred             CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE---cCCCC-EEEEeCCCcEE
Confidence            34579999887 3466678877778889885444333311          2356888877   55554 55667667788


Q ss_pred             EEeecCCCCceeEEE-EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         184 IWEWKVESNSIECIH-VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       184 iwd~~~~~~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      .|+..  ........ ........|.++...+++. |..|+.++-|..+|..+++...                      
T Consensus       387 ~~~~~--~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~----------------------  441 (781)
T 3v9f_A          387 VFENG--KRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQI----------------------  441 (781)
T ss_dssp             EEETT--EEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEE----------------------
T ss_pred             EEECC--CCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEE----------------------
Confidence            88832  11111110 0012346789999888886 5557776778888876533210                      


Q ss_pred             CCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC------CeeeEEEEECCCCCEEEEeeCC
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG------NKSFFDVHYSPLSKLVITASAD  336 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~------~~~i~~~~~~p~~~~l~~g~~d  336 (391)
                           ..........|.++...+++.+..|+. +-|..||..+++.......      ...+.++...++|.+.+. +.+
T Consensus       442 -----~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~  514 (781)
T 3v9f_A          442 -----IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFG  514 (781)
T ss_dssp             -----CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESS
T ss_pred             -----eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEE-EcC
Confidence                 000011345688888887888888887 5688999887665443322      246888999988876654 444


Q ss_pred             CcEEEEcCCCCCcceEEEEecc---ccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSS---HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.+..||.....   .......   ....|.++...+ ++.+.+ ++.+|.|..||.
T Consensus       515 ~Gl~~~~~~~~~---~~~~~~~~~l~~~~i~~i~~d~-~g~lWi-~T~~Glv~~~d~  566 (781)
T 3v9f_A          515 GGVGIYTPDMQL---VRKFNQYEGFCSNTINQIYRSS-KGQMWL-ATGEGLVCFPSA  566 (781)
T ss_dssp             SCEEEECTTCCE---EEEECTTTTCSCSCEEEEEECT-TSCEEE-EETTEEEEESCT
T ss_pred             CCEEEEeCCCCe---EEEccCCCCCCCCeeEEEEECC-CCCEEE-EECCCceEEECC
Confidence            457889876543   2221111   235689999888 445443 344665466653

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.35  E-value=6.2e-05  Score=69.66  Aligned_cols=98  Identities=18%  Similarity=0.062  Sum_probs=63.7

Q ss_pred             EEEEECCCeEEEEecccCceeEEEECCe--------------ee--------------------------EEEEECCCCC
Q psy2107         289 IITSSWDHTLKIWDAELGGMKSEIVGNK--------------SF--------------------------FDVHYSPLSK  328 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------------~i--------------------------~~~~~~p~~~  328 (391)
                      ++.++.+|.+.++|..+|+.+.......              ++                          ..++++|+..
T Consensus       319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g  398 (571)
T 2ad6_A          319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR  398 (571)
T ss_dssp             EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred             EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence            6678889999999999999887765321              11                          2356778777


Q ss_pred             EEEEee-------------------------------------CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         329 LVITAS-------------------------------------ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       329 ~l~~g~-------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      ++++..                                     .+|.|..||+.+++   .+..... ...+.+......
T Consensus       399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~---~~W~~~~-~~~~~~~~~~t~  474 (571)
T 2ad6_A          399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK---AKWTKWE-KFAAWGGTLYTK  474 (571)
T ss_dssp             EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC---EEEEEEE-SSCCCSBCEEET
T ss_pred             EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC---EEEEecC-CCCccceeEEEC
Confidence            666543                                     34789999988766   4333332 122222222222


Q ss_pred             CCCEEEEeeCCCcEEEEecC
Q psy2107         372 DPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++ +++.++.||.|+.||.+
T Consensus       475 gg-~v~~g~~dg~l~a~D~~  493 (571)
T 2ad6_A          475 GG-LVWYATLDGYLKALDNK  493 (571)
T ss_dssp             TT-EEEEECTTSEEEEEETT
T ss_pred             CC-EEEEEcCCCeEEEEECC
Confidence            44 56668899999999964

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.33  E-value=0.0013  Score=57.68  Aligned_cols=228  Identities=9%  Similarity=0.000  Sum_probs=132.1

Q ss_pred             EEEEecCC-EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEE
Q psy2107         120 SAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       120 ~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      +|.+.... +|+.+ ....|+..++.+.....+.........++|.+.  .+.++++-...+.|..++++  .....  .
T Consensus        80 ~C~~~~~~~~l~~~-~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~--~~~ly~~D~~~~~I~r~~~~--g~~~~--~  152 (386)
T 3v65_B           80 SCKALGPEPVLLFA-NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLN--GSNVE--E  152 (386)
T ss_dssp             CEEECSSCCEEEEE-CBSCEEEECTTSCCCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCCEE--E
T ss_pred             eECCccccceeEee-cCccceeeccCCCcEEEEecCCCccEEEEEecC--CCeEEEEeCCCCcEEEEecC--CCCcE--E
Confidence            34444433 44433 446788888866555544444456789999432  55666666677888888743  32221  2


Q ss_pred             EEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCc
Q psy2107         199 VCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA  277 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (391)
                      .+.........+++.+.+..| ++-...+.|.+.+++...                             ....+...-..
T Consensus       153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-----------------------------~~~l~~~~l~~  203 (386)
T 3v65_B          153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-----------------------------RKVLLWQSLEK  203 (386)
T ss_dssp             EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-----------------------------CEEEECSSCSC
T ss_pred             EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-----------------------------eEEeecCCCCC
Confidence            222223355778888754444 555556778877765311                             11112222244


Q ss_pred             ccEEEecc-CCeEEEEEC-C-CeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcce
Q psy2107         278 ISAVQWTA-VDEIITSSW-D-HTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       278 v~~~~~~~-~~~l~s~~~-d-g~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~  351 (391)
                      ...+++.| ++.|+.+.. . +.|..+++... ....+..  -.....++++|++..|..+ +..+.|..+|+.....  
T Consensus       204 P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~--  280 (386)
T 3v65_B          204 PRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR--  280 (386)
T ss_dssp             EEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC--
T ss_pred             CcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee--
Confidence            57788884 566655543 3 67888887543 3333322  2256789999876655544 4567899999864331  


Q ss_pred             EEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                       ...+.........|++.  ++.++++-...+.|..+|
T Consensus       281 -~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~  315 (386)
T 3v65_B          281 -KAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSAN  315 (386)
T ss_dssp             -EEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEE
T ss_pred             -EEEEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEE
Confidence             11222234456788883  456777776777777766

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.28  E-value=0.0017  Score=57.14  Aligned_cols=227  Identities=9%  Similarity=-0.042  Sum_probs=133.5

Q ss_pred             EEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCe
Q psy2107         128 WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL  207 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v  207 (391)
                      +|+.+. ...|+..++.+.....+......+..++|.+.  ++.++++-...+.|..+++............+.......
T Consensus        85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~--~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p  161 (400)
T 3p5b_L           85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP  161 (400)
T ss_dssp             EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred             eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeec--cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence            444443 46888889866555544455667889999432  455666666678888887542110011122233334567


Q ss_pred             EEEEEcCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-
Q psy2107         208 ETVTVSES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-  285 (391)
Q Consensus       208 ~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-  285 (391)
                      ..+++.+. +++.++-...+.|.+.+++...                             ....+...-.....+++.| 
T Consensus       162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~-----------------------------~~~l~~~~~~~P~~iavdp~  212 (400)
T 3p5b_L          162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPV  212 (400)
T ss_dssp             EEEEEETTTTEEEEEETTTTEEEEECTTTCS-----------------------------EEEEEECSSCCEEEEEEETT
T ss_pred             ccEEEEecCCceEEEECCCCeEEEEeCCCCc-----------------------------eEEEEeCCCCCcceEEEecc
Confidence            88999984 4445555567788888876421                             1112222233457888885 


Q ss_pred             CCeEEEEEC--CCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccC
Q psy2107         286 VDEIITSSW--DHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKE  361 (391)
Q Consensus       286 ~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~  361 (391)
                      .+.|+.+..  .+.|...++............ .....+++++++..|..+ ...+.|..+|+...... .+......-.
T Consensus       213 ~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~l~  291 (400)
T 3p5b_L          213 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLA  291 (400)
T ss_dssp             TTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCE-EEEECSSTTS
T ss_pred             cCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccE-EEEeCCCCCC
Confidence            566666543  367888887643332222222 367889999887766655 44678999998654322 2222212234


Q ss_pred             cEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         362 WVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       362 ~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ...+++..  ++.++++-...+.|..+|
T Consensus       292 ~P~gl~v~--~~~lywtd~~~~~V~~~~  317 (400)
T 3p5b_L          292 HPFSLAVF--EDKVFWTDIINEAIFSAN  317 (400)
T ss_dssp             SEEEEEEE--TTEEEEEESSSCSEEEEE
T ss_pred             CCEEEEEe--CCEEEEecCCCCeEEEEE
Confidence            45677773  456777777777887776

>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1

Probab=98.27  E-value=0.00018  Score=67.98  Aligned_cols=61  Identities=18%  Similarity=0.174  Sum_probs=47.0

Q ss_pred             CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      .+|.|..||+.+++.+.......+.....+...+.++++|+.|+.++.||.++++   .+..+.
T Consensus       436 ~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~---~l~~~~  496 (668)
T 1kv9_A          436 VSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE---ALWQFE  496 (668)
T ss_dssp             CEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEE
T ss_pred             ccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcCh---hheEec
Confidence            3588999999999998887765554444444568889999999999999998876   554444

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=98.25  E-value=0.00012  Score=69.30  Aligned_cols=236  Identities=12%  Similarity=0.143  Sum_probs=121.9

Q ss_pred             cCCEEEEEECCC-----------eEEEEcCCCceE---Eecc-CCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEeec
Q psy2107         125 HNDWILTGCYDH-----------SVHIWTRRGEHK---LNIP-GHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWEWK  188 (391)
Q Consensus       125 ~~~~l~t~~~dg-----------~i~iwd~~~~~~---~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd~~  188 (391)
                      .+++++.|+.++           .+.+||.....-   ..+. .+.....++++   ..++.+++.|+. +..+.+||..
T Consensus       197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~---~~~g~lyv~GG~~~~~v~~yd~~  273 (656)
T 1k3i_A          197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM---DGNGQIVVTGGNDAKKTSLYDSS  273 (656)
T ss_dssp             TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE---CTTSCEEEECSSSTTCEEEEEGG
T ss_pred             CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC---CCCCCEEEeCCCCCCceEEecCc
Confidence            466778877543           688999844322   2221 23333445666   557888888884 4678999854


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe-CC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGG-WD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                        ...+..+..+.... .-.+++..+++++++.|+ .+     ..+.+||..+.+-.......                 
T Consensus       274 --t~~W~~~~~~~~~R-~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~-----------------  333 (656)
T 1k3i_A          274 --SDSWIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAK-----------------  333 (656)
T ss_dssp             --GTEEEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSC-----------------
T ss_pred             --CCceeECCCCCccc-cccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcc-----------------
Confidence              44444443332222 223455667899999998 34     56889998764321100000                 


Q ss_pred             CCCCceee-----ecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe----------eeEEEEEC-CC
Q psy2107         263 SSRTPLIT-----LKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK----------SFFDVHYS-PL  326 (391)
Q Consensus       263 ~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----------~i~~~~~~-p~  326 (391)
                        ..+...     ...+...+..+... ++.++.......+..||..+...........          .-.++.+. .+
T Consensus       334 --~~p~~~~~~~~~~~~~~~iyv~Gg~-~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~  410 (656)
T 1k3i_A          334 --VNPMLTADKQGLYRSDNHAWLFGWK-KGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK  410 (656)
T ss_dssp             --SGGGCCCCTTGGGTTTCSCCEEECG-GGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTT
T ss_pred             --ccccccccccceeecCCceEEEECC-CCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCC
Confidence              000000     00011111111111 1122222234567888988765433322111          12333343 36


Q ss_pred             CCEEEEeeCCC-----------cEEEEcCCCCCcceEEEEe--ccccCc-EEEEEECCCCCCEEEEeeCC----------
Q psy2107         327 SKLVITASADK-----------QIRLYDPKVKEGAIVKSTF--SSHKEW-VQSVRWSPIDPQLFVSASFD----------  382 (391)
Q Consensus       327 ~~~l~~g~~dg-----------~i~iwd~~~~~~~~~~~~~--~~h~~~-v~~~~~~~~~~~~l~s~~~d----------  382 (391)
                      +++++.|+.++           .|.+||..+..   .....  .-+... -.+++..| ++++++.||.+          
T Consensus       411 ~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~---W~~~~~~~mp~~R~~~~~~~l~-~g~i~v~GG~~~~~~~~~~~~  486 (656)
T 1k3i_A          411 GKILTFGGSPDYQDSDATTNAHIITLGEPGTSP---NTVFASNGLYFARTFHTSVVLP-DGSTFITGGQRRGIPFEDSTP  486 (656)
T ss_dssp             TEEEEECCBSSSSSSBCCCCEEEEECCSTTSCC---EEEECTTCCSSCCBSCEEEECT-TSCEEEECCBSBCCTTCCCSB
T ss_pred             CeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCC---eeEEccCCCCCCcccCCeEECC-CCCEEEECCcccCcCcCCCCc
Confidence            77888887542           67888877654   21111  111122 23445667 66788888865          


Q ss_pred             -CcEEEEec
Q psy2107         383 -NSVKLWDL  390 (391)
Q Consensus       383 -g~v~iwdl  390 (391)
                       ..+.+||.
T Consensus       487 ~~~v~~ydp  495 (656)
T 1k3i_A          487 VFTPEIYVP  495 (656)
T ss_dssp             CCCCEEEEG
T ss_pred             ccceEEEcC
Confidence             46788885

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=98.24  E-value=0.0016  Score=55.29  Aligned_cols=219  Identities=10%  Similarity=-0.049  Sum_probs=126.9

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES  215 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  215 (391)
                      ..|+..|+.+.....+.........++|.+.  .+.++++-..++.|..++++...........+.........+++.+.
T Consensus        10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~   87 (316)
T 1ijq_A           10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI   87 (316)
T ss_dssp             SSEEEEETTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             CeEEEEECCCcceEehhcCCCceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence            4688888865444433334556788999432  45566666677889888854210000111122222345678999875


Q ss_pred             CC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE
Q psy2107         216 RQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS  293 (391)
Q Consensus       216 ~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~  293 (391)
                      +. +.++-...+.|.+.+.+...                             ....+...-.....++++| ++.++.+.
T Consensus        88 ~~~ly~~d~~~~~I~~~~~~g~~-----------------------------~~~~~~~~~~~P~~iavdp~~g~ly~~d  138 (316)
T 1ijq_A           88 HSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTD  138 (316)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred             CCeEEEEECCCCEEEEEeCCCCc-----------------------------eEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence            44 44555667889999885411                             1111222223457888885 66666655


Q ss_pred             CC--CeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         294 WD--HTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       294 ~d--g~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      ..  +.|...++. +.....+..  -.....++++|++..|..+ +..+.|..+|+.... ...+............+++
T Consensus       139 ~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav  216 (316)
T 1ijq_A          139 WGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAV  216 (316)
T ss_dssp             CSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEE
T ss_pred             cCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEE
Confidence            43  678888775 443333322  2356789999887666554 456789999986433 2222222122344678888


Q ss_pred             CCCCCCEEEEeeCCCcEEEEe
Q psy2107         369 SPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .  ++.++++-...+.|..+|
T Consensus       217 ~--~~~ly~~d~~~~~V~~~~  235 (316)
T 1ijq_A          217 F--EDKVFWTDIINEAIFSAN  235 (316)
T ss_dssp             E--TTEEEEEETTTTEEEEEE
T ss_pred             E--CCEEEEEECCCCeEEEEe
Confidence            4  456677776777787776

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=98.19  E-value=0.00037  Score=64.57  Aligned_cols=27  Identities=7%  Similarity=0.043  Sum_probs=23.1

Q ss_pred             eEEEEECCCeEEEEecccCceeEEEEC
Q psy2107         288 EIITSSWDHTLKIWDAELGGMKSEIVG  314 (391)
Q Consensus       288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~  314 (391)
                      .++.++.+|.++++|..+|+.+..+..
T Consensus       338 ~v~~~~~~G~l~~lD~~tG~~lw~~~~  364 (582)
T 1flg_A          338 ATAHADRNGFFYVVDRSNGKLQNAFPF  364 (582)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred             EEEEECCCceEEEEECCCCCEeccccc
Confidence            577889999999999999998877654

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.12  E-value=0.0023  Score=54.30  Aligned_cols=191  Identities=10%  Similarity=0.107  Sum_probs=120.3

Q ss_pred             ecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC----CC---EEEEEe-C--CCcEEEEECC
Q psy2107         165 YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES----RQ---QFATGG-W--DCLLKIWSAD  234 (391)
Q Consensus       165 ~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~----~~---~l~sg~-~--dg~i~iwd~~  234 (391)
                      |.++...+++.....+.+.+||+     ..+.+..+..  +.+..+..-|+    ++   ++++.. .  +++|.+|+++
T Consensus        35 ~~dp~~s~ii~t~k~~gL~Vydl-----~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD  107 (355)
T 3amr_A           35 PKTPQNSKLITTNKKSGLVVYSL-----DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID  107 (355)
T ss_dssp             SSCGGGCEEEEEETTTEEEEEET-----TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred             CCCCCccEEEEEcCCCCEEEEcC-----CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence            54555667777778889999995     2244555542  56677776663    22   223333 3  5789999874


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-------CccCcccEEEe--cc-CC--eEEEEECCCeEEEEe
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-------GHKEAISAVQW--TA-VD--EIITSSWDHTLKIWD  302 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~--~~-~~--~l~s~~~dg~i~iwd  302 (391)
                      ....                            .+..+.       ..-..+..+++  ++ .+  ++++...+|.+..|+
T Consensus       108 p~~~----------------------------~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~  159 (355)
T 3amr_A          108 GKNG----------------------------TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYE  159 (355)
T ss_dssp             TTTC----------------------------CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEE
T ss_pred             CCCC----------------------------ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEE
Confidence            2110                            111111       11144556666  54 34  477888899999999


Q ss_pred             cc-------cCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC--cceEEEEec-cc-cCcEEEEEEC--
Q psy2107         303 AE-------LGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE--GAIVKSTFS-SH-KEWVQSVRWS--  369 (391)
Q Consensus       303 ~~-------~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~--~~~~~~~~~-~h-~~~v~~~~~~--  369 (391)
                      +.       +.+.++++.....+..|+..+....|..+-++..|..++.+...  ...++.... ++ ...+..|+.-  
T Consensus       160 l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~  239 (355)
T 3amr_A          160 LKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA  239 (355)
T ss_dssp             EEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred             EEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec
Confidence            83       44677888888888899999998999999888777777754222  223444442 22 2368888884  


Q ss_pred             CCCC-CEEEEeeCCCcEEEEec
Q psy2107         370 PIDP-QLFVSASFDNSVKLWDL  390 (391)
Q Consensus       370 ~~~~-~~l~s~~~dg~v~iwdl  390 (391)
                      +++. ++++|+-.+++..+||.
T Consensus       240 ~~g~gyLivSsQG~~s~~Vydr  261 (355)
T 3amr_A          240 ADGKGYLMASSQGNSSYAIYDR  261 (355)
T ss_dssp             GGGCEEEEEEEGGGTEEEEEES
T ss_pred             CCCCEEEEEEcCCCCEEEEEEC
Confidence            4333 45666656789999986

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=98.08  E-value=0.0011  Score=55.58  Aligned_cols=160  Identities=7%  Similarity=0.089  Sum_probs=104.9

Q ss_pred             EecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-----
Q psy2107         200 CRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-----  273 (391)
Q Consensus       200 ~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  273 (391)
                      +.....--.+++|++....|..++ ..+.|..||...+...                           .+ .+.+     
T Consensus         8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~---------------------------~~-~~~~~s~~g   59 (334)
T 2p9w_A            8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHF---------------------------NV-VIDGASSNG   59 (334)
T ss_dssp             ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEE---------------------------EE-CCTTTCCSS
T ss_pred             ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEE---------------------------EE-ecCCccccC
Confidence            334445567889988666666666 6899999998643210                           01 1111     


Q ss_pred             -ccCcccEEEe---ccCCeEEEEEC--------------CCeEEEEecc---cCceeEEEECC--------------eee
Q psy2107         274 -HKEAISAVQW---TAVDEIITSSW--------------DHTLKIWDAE---LGGMKSEIVGN--------------KSF  318 (391)
Q Consensus       274 -~~~~v~~~~~---~~~~~l~s~~~--------------dg~i~iwd~~---~~~~~~~~~~~--------------~~i  318 (391)
                       ....+..+.|   .+.++|+++..              +..|..||+.   +++.+......              ...
T Consensus        60 ~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~  139 (334)
T 2p9w_A           60 DGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGV  139 (334)
T ss_dssp             CCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEE
T ss_pred             CCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCC
Confidence             0113468888   56677665433              5789999999   88877766532              258


Q ss_pred             EEEEECCCCCEEEEeeCC-CcEEEEcCCCCCcceEEEEe-----ccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         319 FDVHYSPLSKLVITASAD-KQIRLYDPKVKEGAIVKSTF-----SSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       319 ~~~~~~p~~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..++..++|+..++++.. +.|..++.....   .....     .......+.|+++|++ ++|+....+|.+..+|++
T Consensus       140 nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~---~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~  214 (334)
T 2p9w_A          140 VQSAQDRDGNSYVAFALGMPAIARVSADGKT---VSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVS  214 (334)
T ss_dssp             EEEEECTTSCEEEEEEESSCEEEEECTTSCC---EEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECS
T ss_pred             ceeEECCCCCEEEeCCCCCCeEEEEeCCCCE---EeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCC
Confidence            899999999999988888 888888865432   22111     1122246799999955 445555449999999864

>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*

Probab=98.06  E-value=0.00066  Score=62.81  Aligned_cols=61  Identities=16%  Similarity=0.055  Sum_probs=44.5

Q ss_pred             CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      .+|.|..||+.+++.+..+.....+....+...+..++.++.|+.|+.||.++++   .+..+.
T Consensus       442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~---~lw~~~  502 (571)
T 2ad6_A          442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK---ELWNFK  502 (571)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEE
T ss_pred             CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCC---EEEEEe
Confidence            3578999999999998887755443333333346777788999999999998876   444443

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=98.06  E-value=0.0011  Score=61.47  Aligned_cols=26  Identities=12%  Similarity=0.040  Sum_probs=21.9

Q ss_pred             eEEEEECCCeEEEEecccCceeEEEE
Q psy2107         288 EIITSSWDHTLKIWDAELGGMKSEIV  313 (391)
Q Consensus       288 ~l~s~~~dg~i~iwd~~~~~~~~~~~  313 (391)
                      .++.++.+|.+.++|.++|+.+....
T Consensus       325 ~v~~~~~~G~l~~lD~~tG~~lw~~~  350 (599)
T 1w6s_A          325 LLTHPDRNGIVYTLDRTDGALVSANK  350 (599)
T ss_dssp             EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred             EEEEECCCcEEEEEECCCCCEeeccc
Confidence            36668899999999999999887665

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=98.05  E-value=0.006  Score=54.29  Aligned_cols=233  Identities=10%  Similarity=0.084  Sum_probs=136.0

Q ss_pred             EEEEEecC----CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---Cc-EEEEeecCC
Q psy2107         119 VSAIDFHN----DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QT-AMIWEWKVE  190 (391)
Q Consensus       119 V~~~~~~~----~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~-v~iwd~~~~  190 (391)
                      -..+++++    ..|+.+...+.|+.+|.....+..+.........+++   ++++.++++....   .. +...+.  .
T Consensus       141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giav---d~dG~lyVad~~~~~~~~gv~~~~~--~  215 (433)
T 4hw6_A          141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNF---TLNGDMVVVDDQSSDTNTGIYLFTR--A  215 (433)
T ss_dssp             CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEE---CTTCCEEEEECCSCTTSEEEEEECG--G
T ss_pred             CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEE---CCCCCEEEEcCCCCcccceEEEEEC--C
Confidence            44677773    4565555548899999966666666555666889999   7788855554321   11 222221  1


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      . .......+. .......++++| ++.++++-..++.|+.+|..++...                          ..+.
T Consensus       216 ~-~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~--------------------------~~~~  267 (433)
T 4hw6_A          216 S-GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLT--------------------------EEEV  267 (433)
T ss_dssp             G-TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEE--------------------------EEEE
T ss_pred             C-Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEE--------------------------EEEe
Confidence            1 111011111 234456788999 6776666556788888888643210                          0011


Q ss_pred             eecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecc--cCce--eEEEECC----------------eeeEEEEE----
Q psy2107         270 TLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAE--LGGM--KSEIVGN----------------KSFFDVHY----  323 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~--~~~~--~~~~~~~----------------~~i~~~~~----  323 (391)
                      .. +....-..+++++++. |+.+ ...+.|+.++..  ++..  ...+...                .....+++    
T Consensus       268 ~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~  346 (433)
T 4hw6_A          268 MM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNE  346 (433)
T ss_dssp             EC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECG
T ss_pred             cc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccc
Confidence            11 1112223699997664 5555 456789997765  2321  1122111                12566888    


Q ss_pred             -----CCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------------cCcEEEEEECCCCCCEEEEee
Q psy2107         324 -----SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------------KEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       324 -----~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~l~s~~  380 (391)
                           .++|.++++-...+.|+.++.. +.   + ..+.+.                  -.....|+++|.++.++++-.
T Consensus       347 ~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~---v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~  421 (433)
T 4hw6_A          347 AYAGEEDEYDFYFCDRDSHTVRVLTPE-GR---V-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC  421 (433)
T ss_dssp             GGTTSSCCEEEEEEETTTTEEEEECTT-SE---E-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred             cccccCCCCcEEEEECCCCEEEEECCC-CC---E-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence                 7777777777778899999852 22   2 222111                  134789999954777788777


Q ss_pred             CCCcEEEEec
Q psy2107         381 FDNSVKLWDL  390 (391)
Q Consensus       381 ~dg~v~iwdl  390 (391)
                      ..+.|+.+++
T Consensus       422 ~n~rIr~i~~  431 (433)
T 4hw6_A          422 DNHRVRKIAP  431 (433)
T ss_dssp             GGTEEEEEEE
T ss_pred             CCCEEEEEec
Confidence            7888988875

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=98.05  E-value=0.006  Score=54.26  Aligned_cols=232  Identities=11%  Similarity=0.124  Sum_probs=134.3

Q ss_pred             EEEEEecC---CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CC----cEEEEeecCC
Q psy2107         119 VSAIDFHN---DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQ----TAMIWEWKVE  190 (391)
Q Consensus       119 V~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg----~v~iwd~~~~  190 (391)
                      ...|++++   ..|+.+...+.|+.+|+++..+..+.........++|   +++++.|+.+.. ++    .+...+  ..
T Consensus       139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~---d~~G~~lyvad~~~~~~~~~v~~~~--~~  213 (430)
T 3tc9_A          139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICW---THEADSMIITNDQNNNDRPNNYILT--RE  213 (430)
T ss_dssp             CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEE---CTTSSEEEEEECCSCTTSEEEEEEE--GG
T ss_pred             CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEE---eCCCCEEEEEeCCCCcccceEEEEe--CC
Confidence            34566663   3555555558899999987766666555667889999   778885554443 22    233333  11


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      . .......+.. ......++++| ++.++++-..++.|..++...+..                           ..+.
T Consensus       214 g-~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~---------------------------~~~~  264 (430)
T 3tc9_A          214 S-GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET---------------------------TPLF  264 (430)
T ss_dssp             G-TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE---------------------------EEEE
T ss_pred             C-ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE---------------------------EEEE
Confidence            1 1211112221 33457788999 677666666778899999864221                           0111


Q ss_pred             eecCccCcccEEEeccCCe-EEEE-ECCCeEEEEeccc--Cce--eEEEECC----------------eeeE-EEEEC--
Q psy2107         270 TLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAEL--GGM--KSEIVGN----------------KSFF-DVHYS--  324 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~--~~~--~~~~~~~----------------~~i~-~~~~~--  324 (391)
                      ... .......++|++++. |+.+ ...+.|..++...  +..  ...+...                .... .++..  
T Consensus       265 ~~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~  343 (430)
T 3tc9_A          265 TIQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNP  343 (430)
T ss_dssp             ECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECG
T ss_pred             EcC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccc
Confidence            111 123456899997665 5555 4578899987653  221  1222211                0122 44443  


Q ss_pred             ------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------------cCcEEEEEECCCCCCEEEEee
Q psy2107         325 ------PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------------KEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       325 ------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~~~~~~~~~~~l~s~~  380 (391)
                            ++|.+.++=...+.|+.++.. +.   +. .+.+.                  -.....++++|+++.++++-.
T Consensus       344 ~y~~~D~~g~lyvaD~~n~~I~~i~~~-G~---v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~  418 (430)
T 3tc9_A          344 AYKGSSDEYDFYFCDRENHCIRILTPQ-GR---VT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR  418 (430)
T ss_dssp             GGTTSSCCEEEEEEEGGGTEEEEECTT-SE---EE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred             cccccCCCCeEEEEECCCcEEEEECCC-Cc---EE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence                  446666665667889999842 22   21 22111                  125899999996677777777


Q ss_pred             CCCcEEEEec
Q psy2107         381 FDNSVKLWDL  390 (391)
Q Consensus       381 ~dg~v~iwdl  390 (391)
                      ....|+.+++
T Consensus       419 ~n~rIr~i~~  428 (430)
T 3tc9_A          419 ENRRIRKIGY  428 (430)
T ss_dssp             GGTEEEEEEE
T ss_pred             CCCeEEEEcc
Confidence            7788888775

>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A

Probab=98.04  E-value=0.0028  Score=53.76  Aligned_cols=195  Identities=12%  Similarity=0.139  Sum_probs=119.5

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCC-CCe---EEEEEe-C--CCcEEEEeecCCCCceeEEE
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDG-KDA---AFISVS-T--DQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~-~~~---~l~s~~-~--dg~v~iwd~~~~~~~~~~~~  198 (391)
                      ..++++....+-+.+||++++.+..+..  +.++.+..-|.-. .+.   ++++.. .  +++|++|+++........+.
T Consensus        40 ~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~  117 (355)
T 3amr_A           40 NSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT  117 (355)
T ss_dssp             GCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred             ccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence            3467777788899999999999988764  6677777755210 111   233333 3  58999998753333322221


Q ss_pred             E----EecCCCCeEEEEE--cCC-CC-EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         199 V----CRGHERGLETVTV--SES-RQ-QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       199 ~----~~~~~~~v~~l~~--~~~-~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      .    +......+..+++  +|. ++ ++++...+|.+..|++.....-                      ....+.+..
T Consensus       118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g----------------------~~~~~lVR~  175 (355)
T 3amr_A          118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNG----------------------YISGKKVRA  175 (355)
T ss_dssp             CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTS----------------------CEEEEEEEE
T ss_pred             ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCC----------------------cccceEEEE
Confidence            0    0011145666777  664 43 6788888999999998431100                      011234555


Q ss_pred             ecCccCcccEEEec-cCCeEEEEECCCeEEEEecc-----cCceeEEEECC---eeeEEEEE--CCCCC-EEEEee-CCC
Q psy2107         271 LKGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAE-----LGGMKSEIVGN---KSFFDVHY--SPLSK-LVITAS-ADK  337 (391)
Q Consensus       271 ~~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~-----~~~~~~~~~~~---~~i~~~~~--~p~~~-~l~~g~-~dg  337 (391)
                      +... +.+..+... ..+.|+.+-.+.-|..++.+     +++.+..+...   ..+..|++  .++++ +|++++ .++
T Consensus       176 f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~  254 (355)
T 3amr_A          176 FKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNS  254 (355)
T ss_dssp             EECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGT
T ss_pred             ecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCC
Confidence            5543 456666666 46789999998777777754     23444444322   35667777  55666 666655 577


Q ss_pred             cEEEEcCC
Q psy2107         338 QIRLYDPK  345 (391)
Q Consensus       338 ~i~iwd~~  345 (391)
                      +..+||..
T Consensus       255 s~~Vydr~  262 (355)
T 3amr_A          255 SYAIYDRQ  262 (355)
T ss_dssp             EEEEEESS
T ss_pred             EEEEEECC
Confidence            99999986

>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1

Probab=97.97  E-value=0.0014  Score=60.72  Aligned_cols=83  Identities=16%  Similarity=0.181  Sum_probs=53.6

Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc-EEEEEECCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW-VQSVRWSPIDP  373 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~  373 (391)
                      +|.|..||+.+++.+.......+...-.....+.+++.|+.|+.++.||.++++   .+..+...... -.-+.+..++.
T Consensus       465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~---~lW~~~~~~g~~a~P~~y~~~G~  541 (582)
T 1flg_A          465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK---ELWKFQTGSGIVSPPITWEQDGE  541 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred             cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCC---EEEEecCCCCcccCceEEEECCE
Confidence            688999999999998777655433322222246788889999999999998877   55555432221 12255555455


Q ss_pred             CEEEEee
Q psy2107         374 QLFVSAS  380 (391)
Q Consensus       374 ~~l~s~~  380 (391)
                      .++++.+
T Consensus       542 qYv~~~~  548 (582)
T 1flg_A          542 QYLGVTV  548 (582)
T ss_dssp             EEEEEEE
T ss_pred             EEEEEEc
Confidence            5555443

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.97  E-value=0.0063  Score=58.31  Aligned_cols=221  Identities=9%  Similarity=-0.056  Sum_probs=127.3

Q ss_pred             CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc
Q psy2107         134 YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS  213 (391)
Q Consensus       134 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~  213 (391)
                      ....|+..++.+.....+......+..|+|.+.  .+.++++-...+.|+.+++............+.........|++.
T Consensus       402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~--~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD  479 (791)
T 3m0c_C          402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD  479 (791)
T ss_dssp             CBSSEEEECTTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred             cccceeEeeccCCcceeeecCCCceEEEeeccc--CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence            345678888865544444445566788999432  456666766778888888542111011222333344567789999


Q ss_pred             CCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEE
Q psy2107         214 ESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIIT  291 (391)
Q Consensus       214 ~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s  291 (391)
                      +.++.| ++-...+.|.+.+++...                             ....+...-.....|++.+ .+.|+.
T Consensus       480 ~~~~~LY~tD~~~~~I~v~~ldG~~-----------------------------~~~l~~~~l~~P~gIaVDp~~g~LYw  530 (791)
T 3m0c_C          480 WIHSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYW  530 (791)
T ss_dssp             TTTTEEEEEETTTTEEEEEETTSSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred             ecCCcEEEEecCCCeEEEEeCCCCe-----------------------------EEEEEeCCCCCcceEEEecCCCCEEE
Confidence            876544 455567889999886411                             1111222234467888885 467766


Q ss_pred             EEC--CCeEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         292 SSW--DHTLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       292 ~~~--dg~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      +..  .+.|...++.. .....+...  .....|++++.+..|+.+ ...+.|..+++.......++ .-.+.-....+|
T Consensus       531 tD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~-~~~~~l~~P~gl  608 (791)
T 3m0c_C          531 TDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL-EDEKRLAHPFSL  608 (791)
T ss_dssp             EECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-ECTTTTSSEEEE
T ss_pred             ecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe-cCCCccCCCCEE
Confidence            653  26788888764 333333322  367889999876666555 44568999998654422222 111122345667


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEe
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++.  +++++++-...+.|...|
T Consensus       609 av~--~~~lYwtD~~~~~I~~~d  629 (791)
T 3m0c_C          609 AVF--EDKVFWTDIINEAIFSAN  629 (791)
T ss_dssp             EEE--TTEEEEEETTTTEEEEEE
T ss_pred             EEe--CCEEEEEECCCCEEEEEe
Confidence            764  345666666666666554

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.93  E-value=0.0083  Score=57.60  Aligned_cols=192  Identities=9%  Similarity=0.038  Sum_probs=101.6

Q ss_pred             cEEEEEec-C--CEEEEE-ECCC----eEEEEcCCCc-eEEeccCC-CCCeeEEEEEecCCCCeEEEEEeCCC-----cE
Q psy2107         118 WVSAIDFH-N--DWILTG-CYDH----SVHIWTRRGE-HKLNIPGH-GGPVKGVAWLYNDGKDAAFISVSTDQ-----TA  182 (391)
Q Consensus       118 ~V~~~~~~-~--~~l~t~-~~dg----~i~iwd~~~~-~~~~~~~~-~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v  182 (391)
                      .+...+|+ +  ++||-+ ..+|    .|+++|+.+. ...  ..+ ......++|   +++++.|+....|.     .|
T Consensus       175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l--~~~~~~~~~~~~W---spDg~~l~y~~~d~~~~~~~v  249 (751)
T 2xe4_A          175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTI--ADKVSGTNGEIVW---GPDHTSLFYVTKDETLRENKV  249 (751)
T ss_dssp             EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCC--CCCEEEECSCCEE---CSSTTEEEEEEECTTCCEEEE
T ss_pred             EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeC--CccccCceeeEEE---ecCCCEEEEEEECCCCCCCEE
Confidence            56777787 4  455544 3333    4999999554 311  111 112346889   67777666666542     45


Q ss_pred             EEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                      ..+++  .+........+. ........+.|+|+|++|+..+.   ...|.++|+.++..                    
T Consensus       250 ~~~~l--gt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~--------------------  307 (751)
T 2xe4_A          250 WRHVM--GKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA--------------------  307 (751)
T ss_dssp             EEEET--TSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT--------------------
T ss_pred             EEEEC--CCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC--------------------
Confidence            55554  333222122222 22345678899999998876653   34577888865311                    


Q ss_pred             cccCCCCCc--eeeecCccCcccEEEeccCCeEEEEEC-C----CeEEEEecccC-ceeE-EEECCe--eeEEEEECCCC
Q psy2107         259 YSSASSRTP--LITLKGHKEAISAVQWTAVDEIITSSW-D----HTLKIWDAELG-GMKS-EIVGNK--SFFDVHYSPLS  327 (391)
Q Consensus       259 ~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~l~s~~~-d----g~i~iwd~~~~-~~~~-~~~~~~--~i~~~~~~p~~  327 (391)
                             ..  .............+.|+.++.|+..+. +    ..|..+|+.++ .... .+....  .+..+.+. .+
T Consensus       308 -------~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~  379 (751)
T 2xe4_A          308 -------HNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SN  379 (751)
T ss_dssp             -------CCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SS
T ss_pred             -------CceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CC
Confidence                   11  111122334455566565666555443 3    25667777653 2222 233222  45556665 23


Q ss_pred             CEEEEeeCCCc--EEEEcC
Q psy2107         328 KLVITASADKQ--IRLYDP  344 (391)
Q Consensus       328 ~~l~~g~~dg~--i~iwd~  344 (391)
                      .++++...++.  |+++++
T Consensus       380 ~lv~~~~~~g~~~l~~~dl  398 (751)
T 2xe4_A          380 YLVVAGRRAGLTRIWTMMA  398 (751)
T ss_dssp             EEEEEEEETTEEEEEEEEC
T ss_pred             EEEEEEEeCCEEEEEEEec
Confidence            45566666775  555564

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.92  E-value=0.0057  Score=49.75  Aligned_cols=197  Identities=13%  Similarity=0.125  Sum_probs=126.7

Q ss_pred             CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      -.+.+..++++  ++ ++++...++.|...|.++..+..+. .-....-.|++   .+++.++++.-.++.+.++++...
T Consensus        25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~---~~~g~~~vs~E~~~~l~~~~v~~~  101 (255)
T 3qqz_A           25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEY---IGDNQFVISDERDYAIYVISLTPN  101 (255)
T ss_dssp             CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEE---CSTTEEEEEETTTTEEEEEEECTT
T ss_pred             cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEE---eCCCEEEEEECCCCcEEEEEcCCC
Confidence            33468999998  34 5566778899999999877766653 22256778888   667777777667788998887543


Q ss_pred             CCceeEEEEEe------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         191 SNSIECIHVCR------GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       191 ~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      .. ...+....      ........|+|+|.++.|+++.......+|.++. ....                        
T Consensus       102 ~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g-~~~~------------------------  155 (255)
T 3qqz_A          102 SE-VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNG-LLSS------------------------  155 (255)
T ss_dssp             CC-EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEES-TTCS------------------------
T ss_pred             Ce-eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcc-cccC------------------------
Confidence            32 12222221      2345679999999998888777766667776641 1000                        


Q ss_pred             CCceeee-------cCccCcccEEEecc-CCe-EEEEECCCeEEEEecccCceeEEEECC----------eeeEEEEECC
Q psy2107         265 RTPLITL-------KGHKEAISAVQWTA-VDE-IITSSWDHTLKIWDAELGGMKSEIVGN----------KSFFDVHYSP  325 (391)
Q Consensus       265 ~~~~~~~-------~~~~~~v~~~~~~~-~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~----------~~i~~~~~~p  325 (391)
                       ..+..+       ..+-..+..++++| .+. ++.......+.++|.. ++.+..+...          .....++|.+
T Consensus       156 -~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~  233 (255)
T 3qqz_A          156 -NELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDA  233 (255)
T ss_dssp             -SCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECT
T ss_pred             -CceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECC
Confidence             000000       01223467899985 344 5555567788889965 6666666543          2567899999


Q ss_pred             CCCEEEEeeCCCcEEEEc
Q psy2107         326 LSKLVITASADKQIRLYD  343 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd  343 (391)
                      +|++.++ ++-+.++.|.
T Consensus       234 ~G~lyIv-sE~n~~y~f~  250 (255)
T 3qqz_A          234 SGNIYIV-SEPNRFYRFT  250 (255)
T ss_dssp             TCCEEEE-ETTTEEEEEE
T ss_pred             CCCEEEE-cCCceEEEEE
Confidence            9986555 6677777765

>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3

Probab=97.90  E-value=0.0038  Score=52.74  Aligned_cols=163  Identities=13%  Similarity=0.071  Sum_probs=96.0

Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG  273 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (391)
                      .+.+..+.. ......++|+++++++++-..++.|..||.+...                              ...+. 
T Consensus        22 ~~~~~~~p~-~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------------------------------~~~~~-   69 (306)
T 2p4o_A           22 AKIITSFPV-NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------------------------------QIHAT-   69 (306)
T ss_dssp             EEEEEEECT-TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------------------------------EEEEE-
T ss_pred             ceEeEeCCC-CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce------------------------------EEEEe-
Confidence            344455543 2567899999999977776678899999875411                              11111 


Q ss_pred             ccCcccEEEeccCCeEEEEEC--CC-eEEEEecccCceeEEEECC--eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         274 HKEAISAVQWTAVDEIITSSW--DH-TLKIWDAELGGMKSEIVGN--KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~--dg-~i~iwd~~~~~~~~~~~~~--~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .......+++.+++.++.+..  ++ .|..+|..+++........  .....++..+.+..+++-..++.|+++|.....
T Consensus        70 ~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~  149 (306)
T 2p4o_A           70 VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPS  149 (306)
T ss_dssp             CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTE
T ss_pred             CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCc
Confidence            123577889997777666653  22 4777787777754433321  123444555555555555468899999976432


Q ss_pred             cceEEE-------EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         349 GAIVKS-------TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       349 ~~~~~~-------~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ......       .....-...+.+  +|+++.++++-...+.|.++|+
T Consensus       150 ~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~  196 (306)
T 2p4o_A          150 GSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPV  196 (306)
T ss_dssp             EEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEB
T ss_pred             EeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEe
Confidence            111100       000111235666  6756667777777888998886

>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*

Probab=97.88  E-value=0.0019  Score=59.85  Aligned_cols=84  Identities=13%  Similarity=0.088  Sum_probs=52.0

Q ss_pred             CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCCC
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPID  372 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~  372 (391)
                      ..|.|..||+.+++.+.......+...-.+...+.+++.++.|+.++.||.++++   .+..+.-... ...-+.+..++
T Consensus       451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~---~lW~~~l~~g~~~~P~~y~~~G  527 (599)
T 1w6s_A          451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD---LLWKFKIPSGAIGYPMTYTHKG  527 (599)
T ss_dssp             CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETT
T ss_pred             CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCC---EEEEeeCCCCcEeccEEEEeCC
Confidence            3588999999999988877644332221122246778889999999999999877   4444432221 11224444545


Q ss_pred             CCEEEEee
Q psy2107         373 PQLFVSAS  380 (391)
Q Consensus       373 ~~~l~s~~  380 (391)
                      ..++++.+
T Consensus       528 ~qyv~~~~  535 (599)
T 1w6s_A          528 TQYVAIYY  535 (599)
T ss_dssp             EEEEEEEE
T ss_pred             EEEEEEEc
Confidence            54555443

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.84  E-value=0.011  Score=50.26  Aligned_cols=216  Identities=7%  Similarity=0.004  Sum_probs=124.3

Q ss_pred             CCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEE
Q psy2107         135 DHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTV  212 (391)
Q Consensus       135 dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~  212 (391)
                      ...|+..++++..  ............+++|.+.  ++.++.+-...+.|..++++.... ...+  +.........+++
T Consensus        12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~--~~~lyw~D~~~~~I~r~~~~g~~~-~~~~--~~~~l~~p~glav   86 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFNKTES-VQNV--VVSGLLSPDGLAC   86 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGG--GTEEEEEETTTTEEEEEETTSSSC-CCEE--EEECCSCCCEEEE
T ss_pred             cCeEEEEECCCCceEEEEEecCCCccEEEEEEeC--CCEEEEEECCCCcEEEEEccCCCc-eEEE--EcCCCCCccEEEE
Confidence            4578888885432  1111112234668889543  456667767778888888542211 1111  1222345678999


Q ss_pred             cCC-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEE
Q psy2107         213 SES-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEII  290 (391)
Q Consensus       213 ~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~  290 (391)
                      .+. ++++++-...+.|.+++++...                             ..............+++.+ .+.|+
T Consensus        87 d~~~g~ly~~d~~~~~I~~~~~dG~~-----------------------------~~~l~~~~~~~P~giavdp~~g~ly  137 (318)
T 3sov_A           87 DWLGEKLYWTDSETNRIEVSNLDGSL-----------------------------RKVLFWQELDQPRAIALDPSSGFMY  137 (318)
T ss_dssp             ETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECSSCSSEEEEEEEGGGTEEE
T ss_pred             EcCCCeEEEEECCCCEEEEEECCCCc-----------------------------EEEEEeCCCCCccEEEEeCCCCEEE
Confidence            874 4445555567889999886421                             1111112234456788885 56666


Q ss_pred             EEEC--CCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEE
Q psy2107         291 TSSW--DHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQS  365 (391)
Q Consensus       291 s~~~--dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~  365 (391)
                      .+..  .+.|...++. |.....+..  -.....++++|++..|..+ +..+.|..+|+.......+   ..+.......
T Consensus       138 ~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~---~~~~~~~P~g  213 (318)
T 3sov_A          138 WTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV---VKGSLPHPFA  213 (318)
T ss_dssp             EEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE---ECSCCSCEEE
T ss_pred             EEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE---ecCCCCCceE
Confidence            6653  5778888765 333333322  2356789999976655554 4567899999864332212   2223445677


Q ss_pred             EEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         366 VRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       366 ~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +++.  .+.++.+-...+.|..+|.
T Consensus       214 lav~--~~~lywtd~~~~~V~~~~~  236 (318)
T 3sov_A          214 LTLF--EDILYWTDWSTHSILACNK  236 (318)
T ss_dssp             EEEE--TTEEEEEETTTTEEEEEET
T ss_pred             EEEe--CCEEEEEecCCCeEEEEEC
Confidence            8775  3456666666677777664

>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}

Probab=97.82  E-value=0.0011  Score=59.02  Aligned_cols=152  Identities=13%  Similarity=0.174  Sum_probs=93.5

Q ss_pred             CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         206 GLETVTVSE-SRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       206 ~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      ....|+++| ++..|+.+...+.|+.+|+....                              +..+.........++++
T Consensus       138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~------------------------------v~~~~~~~~~P~~ia~d  187 (430)
T 3tc9_A          138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY------------------------------VSTVYSGLSKVRTICWT  187 (430)
T ss_dssp             CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTE------------------------------EEEEECCCSCEEEEEEC
T ss_pred             CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCE------------------------------EEEEecCCCCcceEEEe
Confidence            457889998 45556666655788889886522                              22222234556789999


Q ss_pred             cCCe-EEEEECC-C----eEEEEecccCcee--EEEECCeeeEEEEECC-CCCEEEEeeCCCcEEEEcCCCCCcceEEEE
Q psy2107         285 AVDE-IITSSWD-H----TLKIWDAELGGMK--SEIVGNKSFFDVHYSP-LSKLVITASADKQIRLYDPKVKEGAIVKST  355 (391)
Q Consensus       285 ~~~~-l~s~~~d-g----~i~iwd~~~~~~~--~~~~~~~~i~~~~~~p-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~  355 (391)
                      +++. |+.+... +    .+..++ ..+...  ..+........++++| ++.++++-..++.|+.++....... .+..
T Consensus       188 ~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~  265 (430)
T 3tc9_A          188 HEADSMIITNDQNNNDRPNNYILT-RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFT  265 (430)
T ss_dssp             TTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEE
T ss_pred             CCCCEEEEEeCCCCcccceEEEEe-CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEE
Confidence            6654 6666542 1    233344 333332  2333333456788999 6777766667789999998754311 1112


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      .. .......++|+|++..++++-...+.|..++.
T Consensus       266 ~~-~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~  299 (430)
T 3tc9_A          266 IQ-DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDY  299 (430)
T ss_dssp             CS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             cC-CCCcceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence            21 22457899999955446777777788888763

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=97.80  E-value=0.012  Score=50.67  Aligned_cols=175  Identities=6%  Similarity=-0.066  Sum_probs=104.2

Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      ...|+..++.  .....  .... ....+..++|++....|+.. ...+.|..++++....                   
T Consensus        52 ~~~I~~i~~~--g~~~~--~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-------------------  107 (349)
T 3v64_C           52 RIDIRQVLPH--RSEYT--LLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-------------------  107 (349)
T ss_dssp             BSCEEEECTT--SCCEE--EEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-------------------
T ss_pred             ccceEEEeCC--CCeeE--Eeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-------------------
Confidence            3456666643  32222  2222 34457899999765555544 4668888888865221                   


Q ss_pred             ccccCCCCCceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEe-
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITA-  333 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g-  333 (391)
                                .............+++.+ ++.|+.+ ...+.|.+.++........+... .....+++.|.+..|... 
T Consensus       108 ----------~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td  177 (349)
T 3v64_C          108 ----------EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD  177 (349)
T ss_dssp             ----------EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEE
T ss_pred             ----------eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEec
Confidence                      111222223446788873 5565544 45678999998644333223222 356889999966655444 


Q ss_pred             eCC-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         334 SAD-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       334 ~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ... +.|..+++....   ........-...+.++++|+++.++++-+..+.|..+|+
T Consensus       178 ~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~  232 (349)
T 3v64_C          178 WGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL  232 (349)
T ss_dssp             CSSSCEEEEEETTSCS---CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cCCCCEEEEEeCCCCC---cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence            344 788888876433   111222234467999999877777777777778888775

>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}

Probab=97.80  E-value=0.0094  Score=48.46  Aligned_cols=208  Identities=10%  Similarity=0.123  Sum_probs=121.0

Q ss_pred             eccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy2107         150 NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLL  228 (391)
Q Consensus       150 ~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i  228 (391)
                      .+.+-...+..++|.|.  .+.++++...++.|...|.  .   ...+..+. +-......|++.+++.++++.-.++.+
T Consensus        21 ~l~g~~~~lSGla~~~~--~~~L~aV~d~~~~I~~ld~--~---g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l   93 (255)
T 3qqz_A           21 EIAGITNNISSLTWSAQ--SNTLFSTINKPAAIVEMTT--N---GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAI   93 (255)
T ss_dssp             ECTTCCSCEEEEEEETT--TTEEEEEEETTEEEEEEET--T---CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEE
T ss_pred             ECCCcccCcceeEEeCC--CCEEEEEECCCCeEEEEeC--C---CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcE
Confidence            45566678999999543  3456666777888777773  2   23344432 223568899999988776665567889


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEecc---
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAE---  304 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~---  304 (391)
                      .++++........              ...    . ...+. ..........++|++.+ .|+++.......+|.+.   
T Consensus        94 ~~~~v~~~~~i~~--------------~~~----~-~~~~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~  153 (255)
T 3qqz_A           94 YVISLTPNSEVKI--------------LKK----I-KIPLQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL  153 (255)
T ss_dssp             EEEEECTTCCEEE--------------EEE----E-ECCCS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTT
T ss_pred             EEEEcCCCCeeee--------------eee----e-ccccc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccc
Confidence            9998864221000              000    0 00000 01234457899999654 67777766555666554   


Q ss_pred             cCceeEEEEC--------CeeeEEEEECCC-CCEEEEeeCCCcEEEEcCCCCCcceEEEEec-cc------cCcEEEEEE
Q psy2107         305 LGGMKSEIVG--------NKSFFDVHYSPL-SKLVITASADKQIRLYDPKVKEGAIVKSTFS-SH------KEWVQSVRW  368 (391)
Q Consensus       305 ~~~~~~~~~~--------~~~i~~~~~~p~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~-~h------~~~v~~~~~  368 (391)
                      ....+.....        -..+..+++.|. +++++.......+..+|....  ..-...+. +.      -...-.|+|
T Consensus       154 ~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~  231 (255)
T 3qqz_A          154 SSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAM  231 (255)
T ss_dssp             CSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEE
T ss_pred             cCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEE
Confidence            1112222211        125678999997 456666667788999997532  22222333 21      125789999


Q ss_pred             CCCCCCEEEEeeCCCcEEEE
Q psy2107         369 SPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .+ +++++++ +.-+.++++
T Consensus       232 d~-~G~lyIv-sE~n~~y~f  249 (255)
T 3qqz_A          232 DA-SGNIYIV-SEPNRFYRF  249 (255)
T ss_dssp             CT-TCCEEEE-ETTTEEEEE
T ss_pred             CC-CCCEEEE-cCCceEEEE
Confidence            99 5565555 665655554

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=97.80  E-value=0.038  Score=55.41  Aligned_cols=76  Identities=13%  Similarity=0.126  Sum_probs=50.0

Q ss_pred             CCcEEEEEec--------CCEEEEEEC-CCeEEEEcCCCceEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         116 DDWVSAIDFH--------NDWILTGCY-DHSVHIWTRRGEHKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       116 ~~~V~~~~~~--------~~~l~t~~~-dg~i~iwd~~~~~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      ...|.|+++.        .++++.|.. |++++|+++.........  +......++..... ....+|..|-.||.+.-
T Consensus       553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~-~~~~~L~igl~dG~l~~  631 (1158)
T 3ei3_A          553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF-ESSHYLLCALGDGALFY  631 (1158)
T ss_dssp             SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE-TTEEEEEEEETTSEEEE
T ss_pred             CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe-CCCcEEEEEeCCCeEEE
Confidence            4479999985        369999997 999999999543322211  11234455555432 23468899999999888


Q ss_pred             EeecCCCC
Q psy2107         185 WEWKVESN  192 (391)
Q Consensus       185 wd~~~~~~  192 (391)
                      +.++..++
T Consensus       632 ~~~d~~tg  639 (1158)
T 3ei3_A          632 FGLNIETG  639 (1158)
T ss_dssp             EEECTTTC
T ss_pred             EEEcCCCC
Confidence            77654333

>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}

Probab=97.80  E-value=0.0012  Score=63.42  Aligned_cols=192  Identities=11%  Similarity=0.024  Sum_probs=101.6

Q ss_pred             CeeEEEEEecC-CCCeEEEEEeC-CC----cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----
Q psy2107         157 PVKGVAWLYND-GKDAAFISVST-DQ----TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----  225 (391)
Q Consensus       157 ~v~~l~~~~~~-~~~~~l~s~~~-dg----~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----  225 (391)
                      .+...+|   + |++++|+.+.. +|    +|+++|+.... ... ...+.   .....++|+|+++.|+....|     
T Consensus       175 ~~~~~~~---S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~-~~l-~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~  246 (751)
T 2xe4_A          175 DVMEVKP---APPEHDLVAFSVDMSGNEVYTIEFKRISDPS-QTI-ADKVS---GTNGEIVWGPDHTSLFYVTKDETLRE  246 (751)
T ss_dssp             EEEEEEE---CTTTTCEEEEEEESSSSSCEEEEEEETTCTT-CCC-CCCEE---EECSCCEECSSTTEEEEEEECTTCCE
T ss_pred             EEeeeEe---cCCCCCEEEEEEeCCCCceEEEEEEECCCCC-EeC-Ccccc---CceeeEEEecCCCEEEEEEECCCCCC
Confidence            5677888   7 78887775433 33    48888865330 210 00111   113468899999888777665     


Q ss_pred             CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEeccCCe-EEEEE---CCCeEEE
Q psy2107         226 CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE-IITSS---WDHTLKI  300 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-l~s~~---~dg~i~i  300 (391)
                      ..|..+++.++..                           .....+. ........+.|++++. |+..+   ....|.+
T Consensus       247 ~~v~~~~lgt~~~---------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~  299 (751)
T 2xe4_A          247 NKVWRHVMGKLQS---------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL  299 (751)
T ss_dssp             EEEEEEETTSCGG---------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred             CEEEEEECCCCch---------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence            2577777755321                           0111111 1223345778997764 44443   2446888


Q ss_pred             EecccCc-ee--EEEEC--CeeeEEEEECCCCCEEEEeeCC----CcEEEEcCCCCCcceEEEE-eccccC--cEEEEEE
Q psy2107         301 WDAELGG-MK--SEIVG--NKSFFDVHYSPLSKLVITASAD----KQIRLYDPKVKEGAIVKST-FSSHKE--WVQSVRW  368 (391)
Q Consensus       301 wd~~~~~-~~--~~~~~--~~~i~~~~~~p~~~~l~~g~~d----g~i~iwd~~~~~~~~~~~~-~~~h~~--~v~~~~~  368 (391)
                      +|+.++. ..  ..+..  ......+.|+..+.+++....+    ..|..+++.....  .. . +..|..  .+..+.+
T Consensus       300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~--~~-~~li~~~~~~~l~~~~~  376 (751)
T 2xe4_A          300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSD--WS-HVLVDHSEDVFMESIAV  376 (751)
T ss_dssp             EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTC--CC-CEEECCCSSEEEEEEEE
T ss_pred             EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccc--ce-eeEECCCCCcEEEEEEE
Confidence            8988752 12  22221  1234445544333344444333    3567777654211  11 1 122333  3455665


Q ss_pred             CCCCCCEEEEeeCCCcEEEE
Q psy2107         369 SPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       369 ~~~~~~~l~s~~~dg~v~iw  388 (391)
                      .  ++.++++...+|..+||
T Consensus       377 ~--~~~lv~~~~~~g~~~l~  394 (751)
T 2xe4_A          377 R--SNYLVVAGRRAGLTRIW  394 (751)
T ss_dssp             C--SSEEEEEEEETTEEEEE
T ss_pred             E--CCEEEEEEEeCCEEEEE
Confidence            4  55678888888875554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.77  E-value=0.0075  Score=52.79  Aligned_cols=175  Identities=6%  Similarity=-0.048  Sum_probs=104.5

Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      ...|+..++.  ......  .. ........++|++.+..|+ +-...+.|..++++...                    
T Consensus        95 ~~~I~~i~~~--~~~~~~--~~-~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~--------------------  149 (386)
T 3v65_B           95 RIDIRQVLPH--RSEYTL--LL-NNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSN--------------------  149 (386)
T ss_dssp             BSCEEEECTT--SCCCEE--EE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC--------------------
T ss_pred             CccceeeccC--CCcEEE--Ee-cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC--------------------
Confidence            4567777743  322222  22 2345688999997655554 44566889889886522                    


Q ss_pred             ccccCCCCCceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEee
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~  334 (391)
                               ....+.........+++.+ .+.|+.+ ...+.|.+.++........+... .....+++.|.+..|....
T Consensus       150 ---------~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td  220 (386)
T 3v65_B          150 ---------VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTD  220 (386)
T ss_dssp             ---------EEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred             ---------cEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEec
Confidence                     1111111222345677773 4555544 45678888887644333333222 3578899998766555443


Q ss_pred             -CC-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         335 -AD-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       335 -~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .. +.|..+++....   ........-...+.|+|+|++++++++-+..+.|..+|+
T Consensus       221 ~~~~~~I~r~~~dG~~---~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~  275 (386)
T 3v65_B          221 WGNTPRIEASSMDGSG---RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL  275 (386)
T ss_dssp             CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred             cCCCCEEEEEeCCCCC---cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence             34 678888876433   222222334467999999867777777777788888775

>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A

Probab=97.74  E-value=0.00066  Score=64.18  Aligned_cols=191  Identities=8%  Similarity=0.007  Sum_probs=99.1

Q ss_pred             EEEEEecCCCCeEEEEEeCCC-----------cEEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEeC-CC
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQ-----------TAMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGGW-DC  226 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg-----------~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~~-dg  226 (391)
                      ++++.|.  ++.+++.|+.+.           .+.+||..  .+.+..+..+.. +.....++++..++++++.|+. ++
T Consensus       190 ~~av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~  265 (656)
T 1k3i_A          190 AAAIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK  265 (656)
T ss_dssp             EEEEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT
T ss_pred             eEEEEec--CCEEEEEecccccccccCCCCeEEEEEEeCC--CCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC
Confidence            4555331  678888887543           46777744  555555444433 2333446778889999999984 45


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec-cCCeEEEEE-CC-----CeEE
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITSS-WD-----HTLK  299 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~d-----g~i~  299 (391)
                      .+.+||..+.+-.                           .+..+...... .+++.. ++..++.|+ .+     ..+.
T Consensus       266 ~v~~yd~~t~~W~---------------------------~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e  317 (656)
T 1k3i_A          266 KTSLYDSSSDSWI---------------------------PGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGE  317 (656)
T ss_dssp             CEEEEEGGGTEEE---------------------------ECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEE
T ss_pred             ceEEecCcCCcee---------------------------ECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccce
Confidence            7999998763311                           11111111111 233444 445566666 34     5689


Q ss_pred             EEecccCceeEEEE-----CCeeeEEEEECCCCCEEEEeeCC---------CcEEEEcCCCCCcceEEEEecc------c
Q psy2107         300 IWDAELGGMKSEIV-----GNKSFFDVHYSPLSKLVITASAD---------KQIRLYDPKVKEGAIVKSTFSS------H  359 (391)
Q Consensus       300 iwd~~~~~~~~~~~-----~~~~i~~~~~~p~~~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~~~~------h  359 (391)
                      +||..+.+-...-.     ....-....+..++..++.|+.+         ..+..||...............      .
T Consensus       318 ~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~  397 (656)
T 1k3i_A          318 VYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD  397 (656)
T ss_dssp             EEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCC
T ss_pred             EeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCC
Confidence            99998765332200     00000001223445555555444         3567888776542221111111      0


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCC
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      ...-.++.|...++.+++.||.+
T Consensus       398 ~~~~~av~~~~~~~~i~v~GG~~  420 (656)
T 1k3i_A          398 AMCGNAVMYDAVKGKILTFGGSP  420 (656)
T ss_dssp             CBTCEEEEEETTTTEEEEECCBS
T ss_pred             CCCCceEeccCCCCeEEEEeCCC
Confidence            11234455544467788888854

>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}

Probab=97.73  E-value=0.016  Score=49.34  Aligned_cols=228  Identities=9%  Similarity=0.020  Sum_probs=115.3

Q ss_pred             CcEEEEEec-C-CEEEEEECCCeEEEEcCCCc---eEEecc--CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         117 DWVSAIDFH-N-DWILTGCYDHSVHIWTRRGE---HKLNIP--GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       117 ~~V~~~~~~-~-~~l~t~~~dg~i~iwd~~~~---~~~~~~--~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      ..+.+|.|. + ..++ ++..|.|... .++.   ......  .....+.+|.|   ++ +..++ ++.+|.|..-.  .
T Consensus        36 ~~~~~v~~~~~~~~~~-~G~~g~i~~s-~DgG~tW~~~~~~~~~~~~~~~~i~~---~~-~~~~~-~g~~g~i~~S~--D  106 (327)
T 2xbg_A           36 ATILDMSFIDRHHGWL-VGVNATLMET-RDGGQTWEPRTLVLDHSDYRFNSVSF---QG-NEGWI-VGEPPIMLHTT--D  106 (327)
T ss_dssp             SCEEEEEESSSSCEEE-EETTTEEEEE-SSTTSSCEECCCCCSCCCCEEEEEEE---ET-TEEEE-EEETTEEEEES--S
T ss_pred             CcEEEEEECCCCcEEE-EcCCCeEEEe-CCCCCCCeECCCCCCCCCccEEEEEe---cC-CeEEE-EECCCeEEEEC--C
Confidence            368899996 3 3555 5667766433 3322   111111  23456888988   33 34444 45566554422  2


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      ....+..+.....+...+..+.+.+++..++.+ .+|.|.. ..+.++.                          ...  
T Consensus       107 gG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~t--------------------------W~~--  156 (327)
T 2xbg_A          107 GGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKN--------------------------WQA--  156 (327)
T ss_dssp             TTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSS--------------------------EEE--
T ss_pred             CCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCC--------------------------CEE--
Confidence            233444432211233457778877766655554 4554432 1111111                          111  


Q ss_pred             eecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE--ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI--VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      ........+..+.+.+++.++..+.+|.+..-+-..+..-..+  .....+..+++.+++..++++ .+|.+++.+...+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G  235 (327)
T 2xbg_A          157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNS  235 (327)
T ss_dssp             EECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEE
T ss_pred             eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCC
Confidence            1123345677888887777776666666554321112222222  223467888899988766554 5787777632111


Q ss_pred             CcceEEEEe-ccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         348 EGAIVKSTF-SSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       348 ~~~~~~~~~-~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      ........- ..+...+.++++.+ ++.+++.+ .+|.|.
T Consensus       236 ~tW~~~~~~~~~~~~~~~~v~~~~-~~~~~~~g-~~g~i~  273 (327)
T 2xbg_A          236 ENWGELLSPLRRNSVGFLDLAYRT-PNEVWLAG-GAGALL  273 (327)
T ss_dssp             EEECCCBCTTSSCCSCEEEEEESS-SSCEEEEE-STTCEE
T ss_pred             CeeEeccCCcccCCcceEEEEecC-CCEEEEEe-CCCeEE
Confidence            100000000 01223588999988 55555544 466663

>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1

Probab=97.61  E-value=0.025  Score=47.93  Aligned_cols=179  Identities=9%  Similarity=0.022  Sum_probs=105.4

Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      ...|+..|+.  ......  .+. .......++|++.+..|+ +-...+.|..++++.....                  
T Consensus         9 ~~~I~~i~~~--~~~~~~--~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------------------   65 (316)
T 1ijq_A            9 RHEVRKMTLD--RSEYTS--LIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------------------   65 (316)
T ss_dssp             BSSEEEEETT--SCCCEE--EEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------------------
T ss_pred             CCeEEEEECC--CcceEe--hhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------------------
Confidence            3568888854  322222  222 345678999998665554 4455688999988641100                  


Q ss_pred             ccccCCCCCceeeecCccCcccEEEec-cCCeEEEE-ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEee
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITS-SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~  334 (391)
                             ......+...-.....+++. .++.|+.+ ...+.|.++|+........+. .-.....+++.|.+..|..+.
T Consensus        66 -------~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d  138 (316)
T 1ijq_A           66 -------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD  138 (316)
T ss_dssp             ---------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred             -------cccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEc
Confidence                   00111122222345778887 35665554 567899999987544333333 224668899999766555444


Q ss_pred             C-C-CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         335 A-D-KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       335 ~-d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      . . +.|..+++....   ........-...+.++++|+++.++++-+..+.|..+|+
T Consensus       139 ~~~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~  193 (316)
T 1ijq_A          139 WGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV  193 (316)
T ss_dssp             CSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cCCCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEec
Confidence            3 3 688888875432   111122234568999999877777777777778888875

>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B

Probab=97.53  E-value=0.032  Score=47.24  Aligned_cols=178  Identities=8%  Similarity=-0.038  Sum_probs=104.7

Q ss_pred             CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         179 DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      ...|+..+++........+  +.+ ......++|++.+..| ++-...+.|..++++....                   
T Consensus        12 ~~~I~~i~l~~~~~~~~~~--~~~-~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~-------------------   69 (318)
T 3sov_A           12 RRDLRLVDATNGKENATIV--VGG-LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES-------------------   69 (318)
T ss_dssp             EEEEEEEETTCTTSCCEEE--EEE-EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC-------------------
T ss_pred             cCeEEEEECCCCceEEEEE--ecC-CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc-------------------
Confidence            4678888865322112211  111 2346789999854444 5555678898888865321                   


Q ss_pred             ccccCCCCCceeeecCccCcccEEEec-cCCeEEEE-ECCCeEEEEecccCceeEEE-ECCeeeEEEEECCCCCEEEEee
Q psy2107         258 EYSSASSRTPLITLKGHKEAISAVQWT-AVDEIITS-SWDHTLKIWDAELGGMKSEI-VGNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~g~  334 (391)
                               ....+...-.....+++. .++.|+.+ ...+.|.++++......... ..-.....+++.|.+..|..+.
T Consensus        70 ---------~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td  140 (318)
T 3sov_A           70 ---------VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD  140 (318)
T ss_dssp             ---------CCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred             ---------eEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence                     011111122345677877 35555544 45678999998643322222 2223568899998766655554


Q ss_pred             --CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         335 --ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       335 --~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                        ..+.|..+++....   ........-...+.|+++|+++.++++-+..+.|..+|+
T Consensus       141 ~~~~~~I~r~~~dG~~---~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~  195 (318)
T 3sov_A          141 WGEVPKIERAGMDGSS---RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL  195 (318)
T ss_dssp             CSSSCEEEEEETTSCS---CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             cCCCCEEEEEEcCCCC---eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence              35788888875432   111222233467999999977777777777788888875

>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}

Probab=97.52  E-value=0.039  Score=49.05  Aligned_cols=193  Identities=9%  Similarity=0.082  Sum_probs=107.4

Q ss_pred             CeeEEEEEecCCC---CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC----c-E
Q psy2107         157 PVKGVAWLYNDGK---DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC----L-L  228 (391)
Q Consensus       157 ~v~~l~~~~~~~~---~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~-i  228 (391)
                      ....++|   +++   +.++++ ...+.|+.++..  ...   +..+.........++++++++ |+.+...+    . +
T Consensus       140 ~P~gvav---d~~s~~g~Lyv~-D~~~~I~~id~~--~g~---v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv  209 (433)
T 4hw6_A          140 NIWRMMF---DPNSNYDDLYWV-GQRDAFRHVDFV--NQY---VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGI  209 (433)
T ss_dssp             CCCEEEE---CTTTTTCEEEEE-CBTSCEEEEETT--TTE---EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEE
T ss_pred             CCceEEE---ccccCCCEEEEE-eCCCCEEEEECC--CCE---EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceE
Confidence            3567888   552   554444 333888888842  222   233333455688999999999 44444322    1 2


Q ss_pred             EEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE-CCCeEEEEecccC
Q psy2107         229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS-WDHTLKIWDAELG  306 (391)
Q Consensus       229 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~  306 (391)
                      ...+... .                           ......+. .-.....+++++ ++.|+.+. .++.|+.+|..++
T Consensus       210 ~~~~~~~-~---------------------------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g  260 (433)
T 4hw6_A          210 YLFTRAS-G---------------------------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG  260 (433)
T ss_dssp             EEECGGG-T---------------------------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC
T ss_pred             EEEECCC-C---------------------------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC
Confidence            2222211 0                           00001111 123345677886 67777665 5678999998877


Q ss_pred             ceeEEE-ECC--eeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCcc----eEEEEecc------------ccCcEEEE
Q psy2107         307 GMKSEI-VGN--KSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEGA----IVKSTFSS------------HKEWVQSV  366 (391)
Q Consensus       307 ~~~~~~-~~~--~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~~----~~~~~~~~------------h~~~v~~~  366 (391)
                      .....+ ...  .....++|+|++++|. +-...+.|+.++.......    .......+            .-.....+
T Consensus       261 ~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~gi  340 (433)
T 4hw6_A          261 TLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQG  340 (433)
T ss_dssp             CEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEE
T ss_pred             eEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccE
Confidence            663332 221  1234699999999554 4455688999876532111    01111000            11346789


Q ss_pred             EE---------CCCCCCEEEEeeCCCcEEEEe
Q psy2107         367 RW---------SPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       367 ~~---------~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++         .+ ++.++++-...+.|+.++
T Consensus       341 av~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~  371 (433)
T 4hw6_A          341 IFVKNEAYAGEED-EYDFYFCDRDSHTVRVLT  371 (433)
T ss_dssp             EEEECGGGTTSSC-CEEEEEEETTTTEEEEEC
T ss_pred             EEEccccccccCC-CCcEEEEECCCCEEEEEC
Confidence            99         55 566777766677888775

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.50  E-value=0.00067  Score=64.37  Aligned_cols=221  Identities=9%  Similarity=-0.067  Sum_probs=116.6

Q ss_pred             CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcC
Q psy2107         135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSE  214 (391)
Q Consensus       135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~  214 (391)
                      .+.|+..++.+.....+......+..++|.+.  .+.++++-...+.|+.+++............+.........|++.+
T Consensus       385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~  462 (699)
T 1n7d_A          385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW  462 (699)
T ss_dssp             TTC-CEECTTSCCEECCSCCCTTCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred             ccceEEEeCCCCcceeeeccCcceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence            35778888866555544444456778899432  3445555556688888885421000011111111122345678875


Q ss_pred             C-CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEE
Q psy2107         215 S-RQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITS  292 (391)
Q Consensus       215 ~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~  292 (391)
                      . ++++++-...+.|.+++++....                             ...+.........+++.+ .+.|+.+
T Consensus       463 ~~g~LY~tD~~~~~I~v~d~dg~~~-----------------------------~~l~~~~~~~P~giavDp~~g~ly~t  513 (699)
T 1n7d_A          463 IHSNIYWTDSVLGTVSVADTKGVKR-----------------------------KTLFREQGSKPRAIVVDPVHGFMYWT  513 (699)
T ss_dssp             SSSBCEECCTTTSCEEEEBSSSCCE-----------------------------EEECCCSSCCCCCEECCSSSSCCEEC
T ss_pred             eCCcEEEEeccCCeEEEEecCCCce-----------------------------EEEEeCCCCCcceEEEccCCCcEEEc
Confidence            4 44445545567888888754211                             111111123346777775 4555554


Q ss_pred             EC--CCeEEEEecccCceeEEEE-C-CeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         293 SW--DHTLKIWDAELGGMKSEIV-G-NKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       293 ~~--dg~i~iwd~~~~~~~~~~~-~-~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      ..  .+.|..+++.. .....+. . -.....|+|+|++..| ++-+..+.|..+++...... .+............|+
T Consensus       514 d~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~-~~~~~~~~~~~P~gla  591 (699)
T 1n7d_A          514 DWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLA  591 (699)
T ss_dssp             CCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCE-EECCCSSSCSSCCCCE
T ss_pred             ccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceE-EEEecCCcCCCceEeE
Confidence            32  26777777653 2222221 1 1245679999875544 44456678999998643311 2111111223345566


Q ss_pred             ECCCCCCEEEEeeCCCcEEEEec
Q psy2107         368 WSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       368 ~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..  ..++++....+.|..+|.
T Consensus       592 vd~--~~lywtd~~~~~V~~~d~  612 (699)
T 1n7d_A          592 VFE--DKVFWTDIINEAIFSANR  612 (699)
T ss_dssp             EET--TEEEEECSTTTCEEEEET
T ss_pred             EEC--CEEEEEeCCCCeEEEEEc
Confidence            654  356777777788888763

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=97.50  E-value=0.012  Score=49.30  Aligned_cols=223  Identities=11%  Similarity=0.177  Sum_probs=109.9

Q ss_pred             cCCEEEEEE-CC-----CeEEEEcCCCceEEeccCC---CCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEEeecCC
Q psy2107         125 HNDWILTGC-YD-----HSVHIWTRRGEHKLNIPGH---GGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIWEWKVE  190 (391)
Q Consensus       125 ~~~~l~t~~-~d-----g~i~iwd~~~~~~~~~~~~---~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~  190 (391)
                      .+.+++.|+ .+     ..+.+||.....-..+...   .....++..     ++.+++.|+.+     ..+.+||..  
T Consensus        14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~l~v~GG~~~~~~~~~~~~~d~~--   86 (301)
T 2vpj_A           14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-----HDRIYVIGGYDGRSRLSSVECLDYT--   86 (301)
T ss_dssp             CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCCEEEEETT--
T ss_pred             CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE-----CCEEEEEcCCCCCccCceEEEEECC--
Confidence            345566666 32     3688889865544433321   111222222     56677777755     357777743  


Q ss_pred             CCc---eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         191 SNS---IECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       191 ~~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      ...   +..+..+........++.+  ++++++.|+.+     ..+.+||+.+.+-                        
T Consensus        87 ~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W------------------------  140 (301)
T 2vpj_A           87 ADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQW------------------------  140 (301)
T ss_dssp             CCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEE------------------------
T ss_pred             CCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeE------------------------
Confidence            444   5555443322222223333  56677777654     3577788765321                        


Q ss_pred             CCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEee
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~  334 (391)
                         ..+..+...... .+++...+..++.|+.+     ..+.+||+.+.+-...-..+.   ....+.+  ++++++.|+
T Consensus       141 ---~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG  214 (301)
T 2vpj_A          141 ---SMLGDMQTAREG-AGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGG  214 (301)
T ss_dssp             ---EEEEECSSCCBS-CEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred             ---EECCCCCCCccc-ceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeC
Confidence               111111111111 12222233445555543     468889987765433211111   1122222  467777776


Q ss_pred             CC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107         335 AD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL  390 (391)
Q Consensus       335 ~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl  390 (391)
                      .+     ..+.+||+.+..-. .+..+.........+.+   ++.+++.|+.++     .|.+||+
T Consensus       215 ~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~  276 (301)
T 2vpj_A          215 FDGTAHLSSVEAYNIRTDSWT-TVTSMTTPRCYVGATVL---RGRLYAIAGYDGNSLLSSIECYDP  276 (301)
T ss_dssp             BCSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBEEEEEEEET
T ss_pred             CCCCcccceEEEEeCCCCcEE-ECCCCCCcccceeEEEE---CCEEEEEcCcCCCcccccEEEEcC
Confidence            54     46899998765422 11122212222233333   456788887663     4677775

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=97.49  E-value=0.015  Score=48.81  Aligned_cols=222  Identities=12%  Similarity=0.091  Sum_probs=107.4

Q ss_pred             CCEEEEEECC----CeEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeecCCCCc
Q psy2107         126 NDWILTGCYD----HSVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWKVESNS  193 (391)
Q Consensus       126 ~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~~~  193 (391)
                      +.+++.|+.+    ..+..||.....-..+....   ..-..+.+     ++.+++.|+.++     .+.+||  .....
T Consensus        16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~d--~~~~~   88 (302)
T 2xn4_A           16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-----AGLVFAVGGFNGSLRVRTVDSYD--PVKDQ   88 (302)
T ss_dssp             EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-----TTEEEEESCBCSSSBCCCEEEEE--TTTTE
T ss_pred             CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-----CCEEEEEeCcCCCccccceEEEC--CCCCc
Confidence            4455566543    35788888554433332111   11122222     566777777553     466777  44555


Q ss_pred             eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         194 IECIHVCRGHERGLETVTVSESRQQFATGGWDC-----LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       194 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                      +..+..+........++.+  ++++++.|+.++     .+.+||+.+.+-.                           .+
T Consensus        89 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~---------------------------~~  139 (302)
T 2xn4_A           89 WTSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWF---------------------------HV  139 (302)
T ss_dssp             EEEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEE---------------------------EE
T ss_pred             eeeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEe---------------------------ec
Confidence            5555443322222223333  566777777653     4667777653211                           00


Q ss_pred             eeecCccCcccEEEeccCCeEEEEEC-------CCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCC--
Q psy2107         269 ITLKGHKEAISAVQWTAVDEIITSSW-------DHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASAD--  336 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~~~~l~s~~~-------dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~d--  336 (391)
                      ..+...... .+++...+..++.|+.       -..+.+||+.+.+-...-..+.   ....+.+  ++++++.|+.+  
T Consensus       140 ~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~  216 (302)
T 2xn4_A          140 APMNTRRSS-VGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGP  216 (302)
T ss_dssp             CCCSSCCBS-CEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSS
T ss_pred             CCCCCcccC-ceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCC
Confidence            011111111 1222223334555543       2358889988765433211111   1122222  56777777654  


Q ss_pred             ---CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107         337 ---KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL  390 (391)
Q Consensus       337 ---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl  390 (391)
                         ..+.+||+.+..-. .+..+.........+.+   ++.+++.|+.++     .+.+||+
T Consensus       217 ~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~  274 (302)
T 2xn4_A          217 LVRKSVEVYDPTTNAWR-QVADMNMCRRNAGVCAV---NGLLYVVGGDDGSCNLASVEYYNP  274 (302)
T ss_dssp             SBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEET
T ss_pred             cccceEEEEeCCCCCEe-eCCCCCCccccCeEEEE---CCEEEEECCcCCCcccccEEEEcC
Confidence               46889998765422 11122111111222333   556788887664     4788876

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.35  E-value=0.067  Score=46.95  Aligned_cols=198  Identities=11%  Similarity=0.000  Sum_probs=115.4

Q ss_pred             CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ....+.+++|+  .+ ++.+-...+.|+.+++++.     ....+.........+++.+.  .+.+.++-...+.|.+.+
T Consensus       110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~--~~~lY~~d~~~~~I~~~~  187 (400)
T 3p5b_L          110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVAD  187 (400)
T ss_dssp             SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEEC
T ss_pred             ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec--CCceEEEECCCCeEEEEe
Confidence            34567788987  34 4455556788998988652     22222223445677888321  566667767788888887


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      ++  .....  ..+.........|++.|.+..|+....  .+.|...+++...                           
T Consensus       188 ~~--g~~~~--~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~---------------------------  236 (400)
T 3p5b_L          188 TK--GVKRK--TLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---------------------------  236 (400)
T ss_dssp             TT--TCSEE--EEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS---------------------------
T ss_pred             CC--CCceE--EEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc---------------------------
Confidence            43  22222  222333456789999996666655542  3678888775411                           


Q ss_pred             CCceeeecCccCcccEEEec-cCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcE
Q psy2107         265 RTPLITLKGHKEAISAVQWT-AVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                        ........-.....|+++ ..+.|+.+. ..+.|..+|+............   .....+++. .+.++++-...+.|
T Consensus       237 --~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V  313 (400)
T 3p5b_L          237 --IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI  313 (400)
T ss_dssp             --CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred             --cEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence              111122222456789998 456666664 5678999998654333333321   234466663 34455566667889


Q ss_pred             EEEcCCCCC
Q psy2107         340 RLYDPKVKE  348 (391)
Q Consensus       340 ~iwd~~~~~  348 (391)
                      ..+|..+++
T Consensus       314 ~~~~~~~G~  322 (400)
T 3p5b_L          314 FSANRLTGS  322 (400)
T ss_dssp             EEEESSSCC
T ss_pred             EEEEcCCCC
Confidence            888865544

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.33  E-value=0.12  Score=49.50  Aligned_cols=198  Identities=11%  Similarity=0.004  Sum_probs=113.0

Q ss_pred             CCCcEEEEEec--CC-EEEEEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         115 HDDWVSAIDFH--ND-WILTGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       115 h~~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ....+.+|+|+  .. ++++-...+.|+.+++.+.     ....+.........|++.+.  .++++++-...+.|.+.+
T Consensus       422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~--~~~LY~tD~~~~~I~v~~  499 (791)
T 3m0c_C          422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVAD  499 (791)
T ss_dssp             SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEE
T ss_pred             CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec--CCcEEEEecCCCeEEEEe
Confidence            34567788886  33 5555566688988888652     22223323345667887322  346677777788898888


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      ++  ......  .+.........|++.|.+.+|+....  .+.|...+++...                           
T Consensus       500 ld--G~~~~~--l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~---------------------------  548 (791)
T 3m0c_C          500 TK--GVKRKT--LFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---------------------------  548 (791)
T ss_dssp             TT--SSSEEE--EEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---------------------------
T ss_pred             CC--CCeEEE--EEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc---------------------------
Confidence            54  322222  22233456889999997656655543  2678887775411                           


Q ss_pred             CCceeeecCccCcccEEEec-cCCeEEEEE-CCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcE
Q psy2107         265 RTPLITLKGHKEAISAVQWT-AVDEIITSS-WDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQI  339 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~-~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i  339 (391)
                        ....+...-.....|+++ ..+.|+.+. ..+.|...++........+...   .....|++.. +.++++-...+.|
T Consensus       549 --~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I  625 (791)
T 3m0c_C          549 --IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAI  625 (791)
T ss_dssp             --EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEE
T ss_pred             --eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEE
Confidence              111222223456788888 566766664 4568999988644443333321   1334566642 3444444556778


Q ss_pred             EEEcCCCCC
Q psy2107         340 RLYDPKVKE  348 (391)
Q Consensus       340 ~iwd~~~~~  348 (391)
                      ...+..++.
T Consensus       626 ~~~dk~tG~  634 (791)
T 3m0c_C          626 FSANRLTGS  634 (791)
T ss_dssp             EEEETTTCC
T ss_pred             EEEeCCCCc
Confidence            888765554

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.32  E-value=0.064  Score=45.94  Aligned_cols=176  Identities=10%  Similarity=0.119  Sum_probs=95.1

Q ss_pred             CCCcEEEEeecCCCCceeEEEEEec-----CCCCeEEEEEcC--CCC--EEEEEeC--CCcEEEEECCCCCCCCCCCCCC
Q psy2107         178 TDQTAMIWEWKVESNSIECIHVCRG-----HERGLETVTVSE--SRQ--QFATGGW--DCLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       178 ~dg~v~iwd~~~~~~~~~~~~~~~~-----~~~~v~~l~~~~--~~~--~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~  246 (391)
                      .+|.|.++|.+........+. +.+     .......+.+.+  ++.  ++++-..  +..|.+|+++....        
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~--------  151 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEK--------  151 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTT--------
T ss_pred             CCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCC--------
Confidence            689999999653333333332 222     223566777655  343  3333322  46777877754211        


Q ss_pred             CCCccccccccccccCCCCCceeeecCc-cCcccEEEeccCCeEEEEEC------------------CCeEEEEecccCc
Q psy2107         247 DEGTTSKKRKKEYSSASSRTPLITLKGH-KEAISAVQWTAVDEIITSSW------------------DHTLKIWDAELGG  307 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~l~s~~~------------------dg~i~iwd~~~~~  307 (391)
                                       ....+..+.+. -...+.+...+++.++.++.                  .|.|.-+|.  ++
T Consensus       152 -----------------~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~  212 (355)
T 3sre_A          152 -----------------SLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND  212 (355)
T ss_dssp             -----------------EEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC
T ss_pred             -----------------EEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce
Confidence                             01122233322 23456788887777666543                  144555554  33


Q ss_pred             eeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         308 MKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      .......-...+.++|+|+++.|..+ +..+.|+.|++...........+ ...+..-.+++.++++++.+++..+
T Consensus       213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence            32222222356789999999877665 45789999998642211122233 2345678888988325566655544

>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*

Probab=97.31  E-value=0.066  Score=45.90  Aligned_cols=179  Identities=9%  Similarity=0.163  Sum_probs=103.7

Q ss_pred             CCCeEEEEcCCC--ceEEec--cC-----CCCCeeEEEEEecCCCC--eEEEEEeC--CCcEEEEeecCCCCceeEEEEE
Q psy2107         134 YDHSVHIWTRRG--EHKLNI--PG-----HGGPVKGVAWLYNDGKD--AAFISVST--DQTAMIWEWKVESNSIECIHVC  200 (391)
Q Consensus       134 ~dg~i~iwd~~~--~~~~~~--~~-----~~~~v~~l~~~~~~~~~--~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~  200 (391)
                      .+|.|.++|.+.  .....+  .+     .......+.+.+. .++  .++++-..  +.+|.+|+++........+..+
T Consensus        81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d-~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~  159 (355)
T 3sre_A           81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFID-DDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI  159 (355)
T ss_dssp             -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEEC-TTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred             CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEEC-CCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence            689999999852  222222  22     2235677777663 233  24444333  5788999987665555556566


Q ss_pred             ecC-CCCeEEEEEcCCCCEEEEEeC---C--------------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccC
Q psy2107         201 RGH-ERGLETVTVSESRQQFATGGW---D--------------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSA  262 (391)
Q Consensus       201 ~~~-~~~v~~l~~~~~~~~l~sg~~---d--------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (391)
                      .+. -...+.+.+.++|.+.++...   |              |.|.-+|.                             
T Consensus       160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-----------------------------  210 (355)
T 3sre_A          160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-----------------------------  210 (355)
T ss_dssp             CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-----------------------------
T ss_pred             ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-----------------------------
Confidence            543 235788999999987666431   1              22222222                             


Q ss_pred             CCCCceeeecCccCcccEEEeccCC-eEEEE-ECCCeEEEEeccc-Cce--eEEEECCeeeEEEEECC-CCCEEEEeeCC
Q psy2107         263 SSRTPLITLKGHKEAISAVQWTAVD-EIITS-SWDHTLKIWDAEL-GGM--KSEIVGNKSFFDVHYSP-LSKLVITASAD  336 (391)
Q Consensus       263 ~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~-~~dg~i~iwd~~~-~~~--~~~~~~~~~i~~~~~~p-~~~~l~~g~~d  336 (391)
                        . ....+...-..-+.++|+|++ .++.+ +..+.|..|++.. +..  ...+......-.+++.+ +|++.+++..+
T Consensus       211 --~-~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~  287 (355)
T 3sre_A          211 --N-DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN  287 (355)
T ss_dssp             --T-CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred             --C-eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence              1 111222222345789999776 45554 5678999999863 332  22344445677899999 59987766544


Q ss_pred             -CcEEEEcCC
Q psy2107         337 -KQIRLYDPK  345 (391)
Q Consensus       337 -g~i~iwd~~  345 (391)
                       +.|..|+..
T Consensus       288 g~~v~~~~P~  297 (355)
T 3sre_A          288 GMRIFFYDAE  297 (355)
T ss_dssp             HHHHHSCCTT
T ss_pred             ceEEEEECCC
Confidence             345445544

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=97.30  E-value=0.06  Score=45.20  Aligned_cols=221  Identities=10%  Similarity=0.091  Sum_probs=108.7

Q ss_pred             EEEEEEC--CCeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCC----CcEEEEeecCCCCceeEEE
Q psy2107         128 WILTGCY--DHSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTD----QTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       128 ~l~t~~~--dg~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~  198 (391)
                      +++.|+.  ...+.+||.....-..+..   ......++.+     ++.+++.|+.+    ..+.+||  .....+..+.
T Consensus        14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~d--~~~~~W~~~~   86 (306)
T 3ii7_A           14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-----DNVVYILGGSQLFPIKRMDCYN--VVKDSWYSKL   86 (306)
T ss_dssp             EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-----TTEEEEECCBSSSBCCEEEEEE--TTTTEEEEEE
T ss_pred             EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-----CCEEEEEeCCCCCCcceEEEEe--CCCCeEEECC
Confidence            4555554  3578889986544333321   1122222333     56677777755    5667777  4455565554


Q ss_pred             EEecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec
Q psy2107         199 VCRGHERGLETVTVSESRQQFATGGWD------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (391)
                      .+.........+.+  ++++++.|+.+      ..+.+||..+.+-.                           .+..+.
T Consensus        87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~---------------------------~~~~~p  137 (306)
T 3ii7_A           87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH---------------------------TKPSML  137 (306)
T ss_dssp             CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE---------------------------EECCCS
T ss_pred             CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE---------------------------eCCCCc
Confidence            44322222233333  56677777765      45778887653311                           000011


Q ss_pred             CccCcccEEEeccCCeEEEEEC---------CCeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCC-----
Q psy2107         273 GHKEAISAVQWTAVDEIITSSW---------DHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASAD-----  336 (391)
Q Consensus       273 ~~~~~v~~~~~~~~~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d-----  336 (391)
                      ..... .+++...+..++.|+.         -..+.+||+.+.+-...-....  .-.+++.. ++++++.|+.+     
T Consensus       138 ~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~  215 (306)
T 3ii7_A          138 TQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGL  215 (306)
T ss_dssp             SCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEB
T ss_pred             CCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCC
Confidence            00111 1122223334455543         3458889988765332211111  11122222 56677777643     


Q ss_pred             CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC-----CcEEEEec
Q psy2107         337 KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD-----NSVKLWDL  390 (391)
Q Consensus       337 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v~iwdl  390 (391)
                      ..+.+||+.+..-. .+..+.........+.+   ++.+++.|+.+     ..+.+||+
T Consensus       216 ~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~  270 (306)
T 3ii7_A          216 DNVEYYDIKLNEWK-MVSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNT  270 (306)
T ss_dssp             CCEEEEETTTTEEE-ECCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEET
T ss_pred             ceEEEeeCCCCcEE-ECCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcC
Confidence            46889998765421 11122222222333444   45678888755     45777775

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=97.27  E-value=0.076  Score=45.70  Aligned_cols=240  Identities=11%  Similarity=0.076  Sum_probs=115.1

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceE--Eecc---CCCCCeeEEEEEecCCC---C-eEEEEEeCC-----Cc
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHK--LNIP---GHGGPVKGVAWLYNDGK---D-AAFISVSTD-----QT  181 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~--~~~~---~~~~~v~~l~~~~~~~~---~-~~l~s~~~d-----g~  181 (391)
                      .-..++|.  |+ ++.+..+|.|++++ ++...  ..+.   ........|+|   +++   + .+.++-...     +.
T Consensus        32 ~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~---~pdf~~~g~lYv~~~~~~~~~~~~  106 (352)
T 2ism_A           32 VPWALAFLPDGG-MLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLAL---HPRFPQEPYVYAYRTVAEGGLRNQ  106 (352)
T ss_dssp             CEEEEEECTTSC-EEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEE---CTTTTTSCEEEEEEEECTTSSEEE
T ss_pred             CceEEEEcCCCe-EEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEE---CCCCCCCCEEEEEEecCCCCCccE
Confidence            34578887  44 55556779999998 44321  1111   12356788999   555   3 444443332     56


Q ss_pred             EEEEeecCCCCce---eEE-EEEe---cCCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCC
Q psy2107         182 AMIWEWKVESNSI---ECI-HVCR---GHERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGD  241 (391)
Q Consensus       182 v~iwd~~~~~~~~---~~~-~~~~---~~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~  241 (391)
                      |..++..  ....   +.+ ..+.   +.......++|.|+|.+.++-+..             |.|.-++.+..-... 
T Consensus       107 v~r~~~~--~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~-  183 (352)
T 2ism_A          107 VVRLRHL--GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG-  183 (352)
T ss_dssp             EEEEEEC--SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT-
T ss_pred             EEEEEeC--CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC-
Confidence            7777654  2211   112 2233   111234689999999766664322             344444433200000 


Q ss_pred             CCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCCeE-------EEEecccCc------
Q psy2107         242 PSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDHTL-------KIWDAELGG------  307 (391)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg~i-------~iwd~~~~~------  307 (391)
                          + +..          ..........-.++. ....++|++ .+.|+++.....-       .+.-+..+.      
T Consensus       184 ----n-pf~----------~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~  247 (352)
T 2ism_A          184 ----N-PFL----------GRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPR  247 (352)
T ss_dssp             ----C-TTT----------TCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTT
T ss_pred             ----C-ccc----------CCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCc
Confidence                0 000          000001111122332 245678886 6676666432221       122222221      


Q ss_pred             ------------eeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc---eEEEEeccccCcEEEEEECCCC
Q psy2107         308 ------------MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA---IVKSTFSSHKEWVQSVRWSPID  372 (391)
Q Consensus       308 ------------~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~---~~~~~~~~h~~~v~~~~~~~~~  372 (391)
                                  +...+..+.....++| .+|.++++....+.|...++......   .....+..-...+..+++.|++
T Consensus       248 ~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG  326 (352)
T 2ism_A          248 VVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDG  326 (352)
T ss_dssp             CCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTS
T ss_pred             ccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCC
Confidence                        2223322334566777 45776666666677887776543211   0011221223578999999955


Q ss_pred             CCEEEEe-eCCC
Q psy2107         373 PQLFVSA-SFDN  383 (391)
Q Consensus       373 ~~~l~s~-~~dg  383 (391)
                       .++++. ..+|
T Consensus       327 -~lyv~~~~~~g  337 (352)
T 2ism_A          327 -ALYVTTSNRDG  337 (352)
T ss_dssp             -CEEEEECSTTT
T ss_pred             -cEEEEEeCCCC
Confidence             444444 3344

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=97.23  E-value=0.021  Score=48.09  Aligned_cols=227  Identities=10%  Similarity=0.070  Sum_probs=109.2

Q ss_pred             EEEecCCEEEEEECC----CeEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeC----C-----CcEEE
Q psy2107         121 AIDFHNDWILTGCYD----HSVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVST----D-----QTAMI  184 (391)
Q Consensus       121 ~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~----d-----g~v~i  184 (391)
                      ++...+.+++.|+.+    ..+.+||.....-..+....   .....+..     ++.+++.|+.    +     ..+.+
T Consensus        20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~~~   94 (308)
T 1zgk_A           20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-----GGLLYAVGGRNNSPDGNTDSSALDC   94 (308)
T ss_dssp             -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-----TTEEEEECCEEEETTEEEECCCEEE
T ss_pred             ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-----CCEEEEECCCcCCCCCCeecceEEE
Confidence            344456677777742    46888998655444332211   11122222     5667777765    2     35667


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      ||.  .+..+..+..+........++.+  ++++++.|+.+     ..+.+||..+.+-..                   
T Consensus        95 ~d~--~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-------------------  151 (308)
T 1zgk_A           95 YNP--MTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHL-------------------  151 (308)
T ss_dssp             EET--TTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEE-------------------
T ss_pred             ECC--CCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeE-------------------
Confidence            773  34455444333322222223333  56677777643     357778876533210                   


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECC--e-eeEEEEECCCCCEEE
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGN--K-SFFDVHYSPLSKLVI  331 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~-~i~~~~~~p~~~~l~  331 (391)
                              +..+......- +++...+..++.|+.+     ..+.+||+.+.+-...-..+  . ....+.+  ++++++
T Consensus       152 --------~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv  220 (308)
T 1zgk_A          152 --------VAPMLTRRIGV-GVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYA  220 (308)
T ss_dssp             --------CCCCSSCCBSC-EEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEE
T ss_pred             --------CCCCCccccce-EEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEE
Confidence                    00011111111 1222233445555543     45888998766432221111  1 1122223  567777


Q ss_pred             EeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC-----cEEEEec
Q psy2107         332 TASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN-----SVKLWDL  390 (391)
Q Consensus       332 ~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwdl  390 (391)
                      .|+.+     ..+.+||+.+..-. .+..+.........+.+   ++.+++.|+.++     .+.+||+
T Consensus       221 ~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~  285 (308)
T 1zgk_A          221 AGGYDGQDQLNSVERYDVETETWT-FVAPMKHRRSALGITVH---QGRIYVLGGYDGHTFLDSVECYDP  285 (308)
T ss_dssp             ECCBCSSSBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCEEEEEET
T ss_pred             EeCCCCCCccceEEEEeCCCCcEE-ECCCCCCCccceEEEEE---CCEEEEEcCcCCCcccceEEEEcC
Confidence            77654     56899998765421 11112211122223333   456788887553     4667775

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=97.05  E-value=0.019  Score=51.55  Aligned_cols=153  Identities=10%  Similarity=0.041  Sum_probs=88.6

Q ss_pred             CeEEEEEcCC-C-CEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-C---ccCccc
Q psy2107         206 GLETVTVSES-R-QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-G---HKEAIS  279 (391)
Q Consensus       206 ~v~~l~~~~~-~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~v~  279 (391)
                      ....|+|+|. . +++++-...+.|++.|+..+..                              ..+. .   ......
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v------------------------------~~l~~~~~~~~~~p~  189 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRML------------------------------SSPLNINTIPTNRIR  189 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEE------------------------------EEEECCTTSSCSBEE
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEE------------------------------EEEEccCccccCCCc
Confidence            4578999983 4 4444444446788888865332                              1211 1   123467


Q ss_pred             EEEe-------ccCCe-EEEEECCC-------eEEEEeccc-Ccee-----EEEECCeeeEEEEECCC-CCEEEEeeCCC
Q psy2107         280 AVQW-------TAVDE-IITSSWDH-------TLKIWDAEL-GGMK-----SEIVGNKSFFDVHYSPL-SKLVITASADK  337 (391)
Q Consensus       280 ~~~~-------~~~~~-l~s~~~dg-------~i~iwd~~~-~~~~-----~~~~~~~~i~~~~~~p~-~~~l~~g~~dg  337 (391)
                      .++|       ++++. |+++...+       .|.+++... +...     ..+........++++|+ +.++++-..++
T Consensus       190 ~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g  269 (496)
T 3kya_A          190 SIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKG  269 (496)
T ss_dssp             EEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTT
T ss_pred             EEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCC
Confidence            8899       75554 77766543       256665333 2221     22222224457788995 55555666778


Q ss_pred             cEEEEcCC-------CCCc-----------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         338 QIRLYDPK-------VKEG-----------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       338 ~i~iwd~~-------~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .|+.+|+.       ++..           ...+... +.......|+|+|++..++++-.....|+.++
T Consensus       270 ~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid  338 (496)
T 3kya_A          270 QVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSD  338 (496)
T ss_dssp             EEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred             EEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEe
Confidence            89999986       4332           0011122 23345789999995544566666677888755

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=97.05  E-value=0.21  Score=46.70  Aligned_cols=215  Identities=6%  Similarity=-0.073  Sum_probs=127.0

Q ss_pred             CCCeEEEEcCCCceEE-ecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107         134 YDHSVHIWTRRGEHKL-NIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVT  211 (391)
Q Consensus       134 ~dg~i~iwd~~~~~~~-~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~  211 (391)
                      ....|+..++.+.... .+. ..-.....|+|.+.  ++.++++-..++.|..++++  ....+.  .+.........++
T Consensus        13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~--~~~lywtD~~~~~I~r~~~~--g~~~~~--v~~~g~~~P~GlA   86 (628)
T 4a0p_A           13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVT--DNRIYWTDISLKTISRAFMN--GSALEH--VVEFGLDYPEGMA   86 (628)
T ss_dssp             ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETT--SCSCEE--EECSSCSCCCEEE
T ss_pred             eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECC--CCEEEEEECCCCeEEEEECC--CCCcEE--EEeCCCCCcceEE
Confidence            4567888888543222 222 22346778999543  45666676778888888753  222222  2222234577899


Q ss_pred             EcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeE
Q psy2107         212 VSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEI  289 (391)
Q Consensus       212 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l  289 (391)
                      +.+.+..| ++-...+.|.+.+++...                             ....+...-.....+++.| .+.|
T Consensus        87 vD~~~~~LY~tD~~~~~I~v~~~dG~~-----------------------------~~~l~~~~l~~P~~iavdp~~G~l  137 (628)
T 4a0p_A           87 VDWLGKNLYWADTGTNRIEVSKLDGQH-----------------------------RQVLVWKDLDSPRALALDPAEGFM  137 (628)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSTT-----------------------------CEEEECSSCCCEEEEEEETTTTEE
T ss_pred             EEeCCCEEEEEECCCCEEEEEecCCCc-----------------------------EEEEEeCCCCCcccEEEccCCCeE
Confidence            98765544 554556788888886421                             1111112223457888885 6777


Q ss_pred             EEEEC--CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         290 ITSSW--DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       290 ~s~~~--dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      +.+..  .+.|...++...........-.....++++++++.|..+ ...+.|..+|+..... ...   ........++
T Consensus       138 Y~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~---~~~l~~P~gl  213 (628)
T 4a0p_A          138 YWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVI---ADDLPHPFGL  213 (628)
T ss_dssp             EEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEE---EECCSCEEEE
T ss_pred             EEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEe---eccCCCceEE
Confidence            76653  467777777544333333333467889999987666555 4567899999865432 222   2233345678


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEe
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++..  +.+++|-...+.|...|
T Consensus       214 av~~--~~ly~tD~~~~~I~~~d  234 (628)
T 4a0p_A          214 TQYQ--DYIYWTDWSRRSIERAN  234 (628)
T ss_dssp             EEET--TEEEEEETTTTEEEEEE
T ss_pred             EEEC--CEEEEecCCCCEEEEEE
Confidence            7754  45666665667777665

>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}

Probab=97.05  E-value=0.11  Score=43.62  Aligned_cols=160  Identities=10%  Similarity=0.090  Sum_probs=96.3

Q ss_pred             CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC----C--CCeEEEEE---cCCCCEEEEEe-
Q psy2107         154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH----E--RGLETVTV---SESRQQFATGG-  223 (391)
Q Consensus       154 ~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~--~~v~~l~~---~~~~~~l~sg~-  223 (391)
                      ...--.+++|.+.  ++.++++.-..++|..|+..  .+....+ .+.+-    .  ..+..|.|   .|+++++++.. 
T Consensus        11 ~~~yPE~~~wd~~--~g~~~vs~l~~g~V~~~~~~--~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~   85 (334)
T 2p9w_A           11 KNLTPEDTIYDRT--RQVFYQSNLYKGRIEVYNPK--TQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKN   85 (334)
T ss_dssp             TTCCCSCEEEETT--TTEEEEEETTTTEEEEECTT--TCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEE
T ss_pred             cccCCcCccCcCC--CCEEEEEeccCCEEEEEcCC--CCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcc
Confidence            3344557888432  45555555579999999842  2322323 23221    1  13579999   68877777543 


Q ss_pred             ------------CCCcEEEEECC---CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc-----------cCc
Q psy2107         224 ------------WDCLLKIWSAD---ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH-----------KEA  277 (391)
Q Consensus       224 ------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~  277 (391)
                                  .+..|..+|+.   +++..                           ....+...           ...
T Consensus        86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~---------------------------~~~dL~~~~~~~~~~~g~~~~~  138 (334)
T 2p9w_A           86 AKSFNFADQSSHGASSFHSFNLPLSENSKPV---------------------------WSVNFEKVQDEFEKKAGKRPFG  138 (334)
T ss_dssp             TTTTCTTSCCSSSCCEEEEEESSCCTTCCCS---------------------------EEEESHHHHHHHHHHHSSCCEE
T ss_pred             cccccccccccCCCCEEEEEcCCcCCCCCEE---------------------------EEecCccccccccccccccccC
Confidence                        25778899987   43321                           11111111           123


Q ss_pred             ccEEEeccCCe-EEEEECC-CeEEEEecccCceeEEEE-CC------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         278 ISAVQWTAVDE-IITSSWD-HTLKIWDAELGGMKSEIV-GN------KSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       278 v~~~~~~~~~~-l~s~~~d-g~i~iwd~~~~~~~~~~~-~~------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ...++..+.+. .++++.. +.|...+... +....+. ..      ...+.+++.|+|+.|++....|.+..+|+..
T Consensus       139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~  215 (334)
T 2p9w_A          139 VVQSAQDRDGNSYVAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK  215 (334)
T ss_dssp             EEEEEECTTSCEEEEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred             CceeEECCCCCEEEeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence            66788886655 5557777 7776666543 3233221 11      1366899999999888876699999999874

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.99  E-value=0.23  Score=46.28  Aligned_cols=217  Identities=8%  Similarity=-0.002  Sum_probs=117.9

Q ss_pred             CCCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEE
Q psy2107         134 YDHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVT  211 (391)
Q Consensus       134 ~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~  211 (391)
                      ....|+..++++..  .......-.....++|.+.  ++.++++-...+.|..++++  ... .....+.........++
T Consensus        16 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~--~~~ly~sD~~~~~I~r~~~~--g~~-~~~~v~~~~~~~P~GlA   90 (619)
T 3s94_A           16 NRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFS--HGLIYWSDVSEEAIKRTEFN--KTE-SVQNVVVSGLLSPDGLA   90 (619)
T ss_dssp             CSSBEEEECCC---------CBCCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEE
T ss_pred             ccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeC--CCEEEEEECCCCeEEEEEcc--CCC-ceEEEEeCCCCCcCeEE
Confidence            34567888875532  2223334455778999542  45556665567888888754  211 11122333335788999


Q ss_pred             EcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeE
Q psy2107         212 VSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEI  289 (391)
Q Consensus       212 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l  289 (391)
                      +.+.+..| ++-...+.|.+.+++...                             ........-.....|++.| .+.|
T Consensus        91 vD~~~~~ly~~d~~~~~I~v~~~dG~~-----------------------------~~~l~~~~l~~P~~Iavdp~~g~l  141 (619)
T 3s94_A           91 CDWLGEKLYWTDSETNRIEVSNLDGSL-----------------------------RKVLFWQELDQPRAIALDPSSGFM  141 (619)
T ss_dssp             EETTTTEEEEEETTTTEEEEEETTSCS-----------------------------CEEEECSSCSCCCCEEEETTTTEE
T ss_pred             EEecCCEEEEEeCCCCEEEEEECCCCC-----------------------------EEEEEeCCCCCCceEEEecCCCeE
Confidence            99855544 455567889999986421                             1111112334466888885 4666


Q ss_pred             EEEEC--CCeEEEEecccCceeEEEEC--CeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEE
Q psy2107         290 ITSSW--DHTLKIWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ  364 (391)
Q Consensus       290 ~s~~~--dg~i~iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~  364 (391)
                      +.+..  .+.|...++. |.....+..  -.....+++++++..|..+ ...+.|..+|+.......+..   +......
T Consensus       142 y~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~  217 (619)
T 3s94_A          142 YWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---GSLPHPF  217 (619)
T ss_dssp             EEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CC
T ss_pred             EEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe---CCCCCce
Confidence            66653  3566666654 333333322  2356889999876655544 456789999986533222211   1122235


Q ss_pred             EEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         365 SVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       365 ~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|++.. + .++++-...+.|...|.
T Consensus       218 gi~~~~-~-~ly~td~~~~~V~~~d~  241 (619)
T 3s94_A          218 ALTLFE-D-ILYWTDWSTHSILACNK  241 (619)
T ss_dssp             CEEESS-S-EEEEECTTTCSEEEEES
T ss_pred             EEEEeC-C-EEEEecCCCCEEEEEEC
Confidence            667765 3 55666656667766653

>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...

Probab=96.93  E-value=0.36  Score=48.55  Aligned_cols=112  Identities=13%  Similarity=0.156  Sum_probs=70.3

Q ss_pred             ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeE-EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKS-EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      ..++|++++--. ++|++|- ..+|++|++...+.+. .......+..+.....++++++|..-..|.++..+.......
T Consensus       884 v~g~v~al~~~~-g~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~  961 (1158)
T 3ei3_A          884 VKGAVYSMVEFN-GKLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE  961 (1158)
T ss_dssp             ESSCEEEEEEET-TEEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred             cCCcCEEEeeeC-CEEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence            367788887554 4655554 5899999998765444 111111233223333578999998888888876543333322


Q ss_pred             EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ...-..+..+++++.+-. +. .++.+..+|.+.+..
T Consensus       962 ~~a~D~~~~~vta~~~ld-~~-t~l~aD~~gNl~vl~  996 (1158)
T 3ei3_A          962 EIARDFNPNWMSAVEILD-DD-NFLGAENAFNLFVCQ  996 (1158)
T ss_dssp             EEEECCSCBCEEEEEEEE-TT-EEEEEETTSEEEEEE
T ss_pred             EEEeecccccEEEEEEEc-cC-cEEEEcCCCcEEEEe
Confidence            222334567899999875 33 577788999988875

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=96.84  E-value=0.2  Score=43.10  Aligned_cols=246  Identities=11%  Similarity=0.042  Sum_probs=118.1

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCCCceEEe---c----cCCCCCeeEEEEEecCCC----CeEEEEEeC-------
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLN---I----PGHGGPVKGVAWLYNDGK----DAAFISVST-------  178 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~---~----~~~~~~v~~l~~~~~~~~----~~~l~s~~~-------  178 (391)
                      -..|+|.  ++.++.+...|.|++++.++.....   +    .........+++   +++    +.+.++-+.       
T Consensus        20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~---~pdf~~~g~lYv~~~~~~~~g~~   96 (353)
T 2g8s_A           20 PWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVL---APDFAQSRRIWLSYSEVGDDGKA   96 (353)
T ss_dssp             EEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEE---CTTHHHHCEEEEEEEEECSSSCE
T ss_pred             cEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEE---CCCCCCCCEEEEEEeCCCCCCCc
Confidence            4577886  5525566678999999865432211   1    112345678999   553    444444332       


Q ss_pred             CCcEEEEeecCCCCceeEEEE-Eec------CCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCC
Q psy2107         179 DQTAMIWEWKVESNSIECIHV-CRG------HERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKE  238 (391)
Q Consensus       179 dg~v~iwd~~~~~~~~~~~~~-~~~------~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~  238 (391)
                      ...|..|++............ +..      ....-..|+|.|+|.+.++-+..             |.|.-++.+..-.
T Consensus        97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p  176 (353)
T 2g8s_A           97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP  176 (353)
T ss_dssp             EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred             eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence            224555554322222221221 111      11224579999999665554332             3455555432100


Q ss_pred             CCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEECCC--eEEEEecccC---------
Q psy2107         239 RGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSSWDH--TLKIWDAELG---------  306 (391)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg--~i~iwd~~~~---------  306 (391)
                      ..      .+...         .......+ .-.++. ....++|++ .+.|+++....  .=.|.-+..+         
T Consensus       177 ~~------npf~~---------~~~~~~~i-~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~  239 (353)
T 2g8s_A          177 DD------NPFIK---------ESGVRAEI-WSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLAT  239 (353)
T ss_dssp             TT------CTTTT---------STTSCTTE-EEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBC
T ss_pred             CC------CCCcC---------CCCCCccE-EEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCcc
Confidence            00      00000         00001111 112333 356788887 77877765432  1122111111         


Q ss_pred             ----------------------ceeEEEECCeeeEEEEECC-------CCCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         307 ----------------------GMKSEIVGNKSFFDVHYSP-------LSKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       307 ----------------------~~~~~~~~~~~i~~~~~~p-------~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                                            .+...+..+.....++|..       +|.++++....+.|...++...........+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~  319 (353)
T 2g8s_A          240 WGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT  319 (353)
T ss_dssp             SSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG
T ss_pred             CCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc
Confidence                                  1122333344566777753       46677776677888888776432111111222


Q ss_pred             cccCcEEEEEECCCCCCEEEE-eeCCCcE
Q psy2107         358 SHKEWVQSVRWSPIDPQLFVS-ASFDNSV  385 (391)
Q Consensus       358 ~h~~~v~~~~~~~~~~~~l~s-~~~dg~v  385 (391)
                      .....+..+++.|++ .++++ -..+|.|
T Consensus       320 ~~~~rp~~v~~~pdG-~lyv~td~~~g~I  347 (353)
T 2g8s_A          320 DRGQRIRDVRTGPDG-YLYVLTDESSGEL  347 (353)
T ss_dssp             GGCCCEEEEEECTTS-CEEEEECSTTEEE
T ss_pred             CCCCceeEEEECCCC-cEEEEEeCCCCEE
Confidence            334579999999955 45543 3234543

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=96.81  E-value=0.23  Score=43.43  Aligned_cols=217  Identities=12%  Similarity=0.102  Sum_probs=130.8

Q ss_pred             CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC--
Q psy2107         127 DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE--  204 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~--  204 (391)
                      +.+|.=. ..++.|+|++.+....-......|.-=.|...  +  .|+-.+ +..|..|++..   ...+...+..|.  
T Consensus        78 ~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~--~--~l~lVT-~taVyHWsi~~---~s~P~kvFdR~~~L  148 (494)
T 1bpo_A           78 KVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL--N--TVALVT-DNAVYHWSMEG---ESQPVKMFDRHSSL  148 (494)
T ss_dssp             SCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET--T--EEEEEC-SSEEEEEESSS---SCCCEEEEECCGGG
T ss_pred             cEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC--C--eEEEEc-CCeeEEecccC---CCCchhheecchhc
Confidence            3444433 67999999966554443334567777788632  3  344333 56899999642   335666666553  


Q ss_pred             --CCeEEEEEcCCCCEEEEEe-------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         205 --RGLETVTVSESRQQFATGG-------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       205 --~~v~~l~~~~~~~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                        ..|..-..+++.++++..|       -.|.+.+|..+.                              +.-+.+.+|.
T Consensus       149 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er------------------------------~~sQ~ieGha  198 (494)
T 1bpo_A          149 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR------------------------------KVSQPIEGHA  198 (494)
T ss_dssp             TTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT------------------------------CCEEEECCSE
T ss_pred             ccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc------------------------------cccchheeee
Confidence              4566777788888876443       236788888863                              4456677887


Q ss_pred             CcccEEEeccC----CeEEEEEC---CCeEEEEecccC---ce---eEEEE----C---CeeeEEEEECCCCCEEEEeeC
Q psy2107         276 EAISAVQWTAV----DEIITSSW---DHTLKIWDAELG---GM---KSEIV----G---NKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       276 ~~v~~~~~~~~----~~l~s~~~---dg~i~iwd~~~~---~~---~~~~~----~---~~~i~~~~~~p~~~~l~~g~~  335 (391)
                      .....+.....    ..++.+..   .+.++|-++...   ..   .+...    .   ..-..++..++....+..-+.
T Consensus       199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK  278 (494)
T 1bpo_A          199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITK  278 (494)
T ss_dssp             EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEET
T ss_pred             eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEec
Confidence            66555554421    12333333   378999988543   11   11111    1   112356788888888888889


Q ss_pred             CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      -|.|++||+.++.   ++..-+-...+|...+-+...+- ++.....|.|.
T Consensus       279 ~G~i~lyDleTgt---~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl  325 (494)
T 1bpo_A          279 YGYIHLYDLETGT---CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVL  325 (494)
T ss_dssp             TSEEEEEETTTCC---EEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEE
T ss_pred             CceEEEEecccce---eeeeecccCCceEEecccCCCCc-EEEEccCceEE
Confidence            9999999999877   55544445555655555442332 44444556543

>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}

Probab=96.80  E-value=0.098  Score=43.76  Aligned_cols=188  Identities=10%  Similarity=0.149  Sum_probs=93.8

Q ss_pred             EEecCCEEEEEECC-----CeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEEEeec
Q psy2107         122 IDFHNDWILTGCYD-----HSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMIWEWK  188 (391)
Q Consensus       122 ~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~iwd~~  188 (391)
                      +...+.+++.|+.+     ..+.+||.....-..+..   ......++.+     ++.+++.|+.++     .+.+||  
T Consensus        58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~d--  130 (302)
T 2xn4_A           58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-----NGLLYAVGGFDGSTGLSSVEAYN--  130 (302)
T ss_dssp             EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-----TTEEEEEEEECSSCEEEEEEEEE--
T ss_pred             EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-----CCEEEEEcCCCCCccCceEEEEe--
Confidence            34456677777755     358888885544333321   1122222333     566777777654     355666  


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      ..+..+..+..+........++.+  ++++++.|+.+       ..+.+||+.+.+-.                      
T Consensus       131 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~----------------------  186 (302)
T 2xn4_A          131 IKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWT----------------------  186 (302)
T ss_dssp             TTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEE----------------------
T ss_pred             CCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEE----------------------
Confidence            445555555433322222222222  56667776643       34778887653211                      


Q ss_pred             CCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEe
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITA  333 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g  333 (391)
                           .+..+...... .++....+..++.|+.+     ..+.+||+.+.+-...-....   ....+.+  ++++++.|
T Consensus       187 -----~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~G  258 (302)
T 2xn4_A          187 -----YIAEMSTRRSG-AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVG  258 (302)
T ss_dssp             -----EECCCSSCCBS-CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred             -----ECCCCcccccc-ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEEC
Confidence                 00011111111 12222344456666554     368899988765432211111   1112222  56777777


Q ss_pred             eCCC-----cEEEEcCCCCC
Q psy2107         334 SADK-----QIRLYDPKVKE  348 (391)
Q Consensus       334 ~~dg-----~i~iwd~~~~~  348 (391)
                      +.++     .+.+||+.+..
T Consensus       259 G~~~~~~~~~v~~yd~~~~~  278 (302)
T 2xn4_A          259 GDDGSCNLASVEYYNPTTDK  278 (302)
T ss_dssp             CBCSSSBCCCEEEEETTTTE
T ss_pred             CcCCCcccccEEEEcCCCCe
Confidence            7553     48899987653

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=96.75  E-value=0.0069  Score=57.47  Aligned_cols=193  Identities=12%  Similarity=0.032  Sum_probs=100.6

Q ss_pred             cEEEEEec--CCEEE-EEECCCeEEEEcCCC----ceEEe-ccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeec
Q psy2107         118 WVSAIDFH--NDWIL-TGCYDHSVHIWTRRG----EHKLN-IPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWK  188 (391)
Q Consensus       118 ~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~----~~~~~-~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~  188 (391)
                      .+.+++|+  +..|+ +-...+.|+.+++.+    ..... +.........|++   +. .+.++++-...+.|.++++.
T Consensus       407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav---D~~~g~LY~tD~~~~~I~v~d~d  483 (699)
T 1n7d_A          407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV---DWIHSNIYWTDSVLGTVSVADTK  483 (699)
T ss_dssp             TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC---CCSSSBCEECCTTTSCEEEEBSS
T ss_pred             ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE---EeeCCcEEEEeccCCeEEEEecC
Confidence            34466775  34444 434557888888754    22211 1111223456676   42 44555665667888888843


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-D-CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                        .....  ..+.........|+++|.+.+|+.+.. . +.|..++++...                             
T Consensus       484 --g~~~~--~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-----------------------------  530 (699)
T 1n7d_A          484 --GVKRK--TLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-----------------------------  530 (699)
T ss_dssp             --SCCEE--EECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-----------------------------
T ss_pred             --CCceE--EEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-----------------------------
Confidence              22211  122222345678889886554544432 2 567666654311                             


Q ss_pred             ceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEEC-C---eeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         267 PLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVG-N---KSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~-~---~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                      ........-.....|++++ ++.|+.+ +..+.|..+|+.... ...+.. .   .....+++..+ .++++....+.|.
T Consensus       531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~  608 (699)
T 1n7d_A          531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF  608 (699)
T ss_dssp             CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEE
T ss_pred             eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEE
Confidence            0011111123456789984 4555555 456789999986433 233321 1   12344555443 4555556678899


Q ss_pred             EEcCCCCC
Q psy2107         341 LYDPKVKE  348 (391)
Q Consensus       341 iwd~~~~~  348 (391)
                      .++..+++
T Consensus       609 ~~d~~~G~  616 (699)
T 1n7d_A          609 SANRLTGS  616 (699)
T ss_dssp             EEETTTEE
T ss_pred             EEEccCCC
Confidence            99875543

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=96.71  E-value=0.051  Score=47.23  Aligned_cols=105  Identities=15%  Similarity=0.172  Sum_probs=72.3

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECC-----eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC---c------c
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGN-----KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE---G------A  350 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~---~------~  350 (391)
                      .+..++.+ .++.||.-++.....-+.+..+     ..+..+..+|+|++||..+ +..|.|-.+..+.   .      +
T Consensus        31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~  108 (452)
T 3pbp_A           31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA  108 (452)
T ss_dssp             TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred             CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence            33444444 3588998888755555555554     2678899999999999886 6679998876321   0      1


Q ss_pred             eEEEEecc------ccCcEEEEEECCCC--CCEEEEeeCCCcEEEEecC
Q psy2107         351 IVKSTFSS------HKEWVQSVRWSPID--PQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       351 ~~~~~~~~------h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwdlr  391 (391)
                      .....+.-      ...+|..+.|+|-+  +..|++-..|+.|++||+.
T Consensus       109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~  157 (452)
T 3pbp_A          109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL  157 (452)
T ss_dssp             TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred             cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence            11122221      25679999999954  3378999999999999984

>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*

Probab=96.59  E-value=0.47  Score=44.24  Aligned_cols=195  Identities=9%  Similarity=-0.003  Sum_probs=107.4

Q ss_pred             CcEEEEEec--CCEEE-EEECCCeEEEEcCCCce--EEeccCCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeecCC
Q psy2107         117 DWVSAIDFH--NDWIL-TGCYDHSVHIWTRRGEH--KLNIPGHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      ....+++|+  ++.|+ +-...+.|..+++++..  ...+...-.....+++   +. .++++++-...+.|.+.+++  
T Consensus        40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv---D~~~~~ly~~d~~~~~I~v~~~d--  114 (619)
T 3s94_A           40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC---DWLGEKLYWTDSETNRIEVSNLD--  114 (619)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE---ETTTTEEEEEETTTTEEEEEETT--
T ss_pred             CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE---EecCCEEEEEeCCCCEEEEEECC--
Confidence            356688887  44444 44456789888886542  2222222356778888   44 45566666778899998854  


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                      ......+  ....-.....|++.|.+..|+....  .+.|...+++...                             ..
T Consensus       115 G~~~~~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-----------------------------~~  163 (619)
T 3s94_A          115 GSLRKVL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-----------------------------RF  163 (619)
T ss_dssp             SCSCEEE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS-----------------------------CE
T ss_pred             CCCEEEE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc-----------------------------eE
Confidence            2222222  2233455778999997555555443  3566666664311                             11


Q ss_pred             eeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         269 ITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      ......-.....+++++ .+.|+.+ ...+.|...|+.......... .-.....+++..+ ..+++-...+.|...|..
T Consensus       164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~  242 (619)
T 3s94_A          164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKY  242 (619)
T ss_dssp             EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESS
T ss_pred             EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECC
Confidence            11112233457788884 5666666 446788888886433222222 1112345677654 444555567788888876


Q ss_pred             CCC
Q psy2107         346 VKE  348 (391)
Q Consensus       346 ~~~  348 (391)
                      +++
T Consensus       243 tg~  245 (619)
T 3s94_A          243 TGE  245 (619)
T ss_dssp             SCC
T ss_pred             CCc
Confidence            543

>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}

Probab=96.58  E-value=0.26  Score=41.07  Aligned_cols=189  Identities=13%  Similarity=0.203  Sum_probs=96.1

Q ss_pred             EEEecCCEEEEEECC-----CeEEEEcCCCce---EEe---ccCCCCCeeEEEEEecCCCCeEEEEEeCCC-----cEEE
Q psy2107         121 AIDFHNDWILTGCYD-----HSVHIWTRRGEH---KLN---IPGHGGPVKGVAWLYNDGKDAAFISVSTDQ-----TAMI  184 (391)
Q Consensus       121 ~~~~~~~~l~t~~~d-----g~i~iwd~~~~~---~~~---~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg-----~v~i  184 (391)
                      ++...+.+++.|+.+     ..+.+||.....   -..   +........++.+     ++.+++.|+.++     .+.+
T Consensus        58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~  132 (301)
T 2vpj_A           58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL-----GDMIYVSGGFDGSRRHTSMER  132 (301)
T ss_dssp             EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE-----TTEEEEECCBCSSCBCCEEEE
T ss_pred             EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE-----CCEEEEEcccCCCcccceEEE
Confidence            334557777777765     468899984333   222   2221222222333     566777776543     4666


Q ss_pred             EeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         185 WEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      ||  .....+..+..+........++.+  ++++++.|+.+     ..+.+||+.+.+-.                    
T Consensus       133 ~d--~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~--------------------  188 (301)
T 2vpj_A          133 YD--PNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT--------------------  188 (301)
T ss_dssp             EE--TTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE--------------------
T ss_pred             Ec--CCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE--------------------
Confidence            77  445566665544432222223333  56677777754     35778887653321                    


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEE
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVI  331 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~  331 (391)
                             .+..+...... .++....+..++.|+.+     ..+.+||+.+.+-...-..+.   ....+.+  ++++++
T Consensus       189 -------~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v  258 (301)
T 2vpj_A          189 -------NVTPMATKRSG-AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYA  258 (301)
T ss_dssp             -------EECCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEE
T ss_pred             -------eCCCCCccccc-ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEE
Confidence                   01011111111 12222233445666553     468899998765433221111   1122222  567777


Q ss_pred             EeeCC-----CcEEEEcCCCCC
Q psy2107         332 TASAD-----KQIRLYDPKVKE  348 (391)
Q Consensus       332 ~g~~d-----g~i~iwd~~~~~  348 (391)
                      .|+.+     ..+.+||+.+.+
T Consensus       259 ~GG~~~~~~~~~v~~yd~~~~~  280 (301)
T 2vpj_A          259 IAGYDGNSLLSSIECYDPIIDS  280 (301)
T ss_dssp             ECCBCSSSBEEEEEEEETTTTE
T ss_pred             EcCcCCCcccccEEEEcCCCCe
Confidence            77655     457888887654

>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}

Probab=96.55  E-value=0.41  Score=42.99  Aligned_cols=244  Identities=9%  Similarity=0.048  Sum_probs=132.1

Q ss_pred             cEEEEEecC---C-EEEEEECCCeEEEEcCCCceEEeccCCC----CCeeEEEE-------EecCCCCeEEEEEeCCC-c
Q psy2107         118 WVSAIDFHN---D-WILTGCYDHSVHIWTRRGEHKLNIPGHG----GPVKGVAW-------LYNDGKDAAFISVSTDQ-T  181 (391)
Q Consensus       118 ~V~~~~~~~---~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~----~~v~~l~~-------~~~~~~~~~l~s~~~dg-~  181 (391)
                      .-..|+|++   + ++++....+.|++.|++...+..+..-.    .....++|       .+   ++..|+.+...+ .
T Consensus       140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~---~G~~lyvad~~~~~  216 (496)
T 3kya_A          140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD---EAEYMIVAIDYDGK  216 (496)
T ss_dssp             SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC---TTCEEEEEECCCTT
T ss_pred             CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC---CCCEEEEEeCCCCC
Confidence            455777774   2 4555454577999999877776654322    24677887       54   455454444433 2


Q ss_pred             ------EEEEeecCCCCce------eEEEEEecCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECC-------CCCCCCC
Q psy2107         182 ------AMIWEWKVESNSI------ECIHVCRGHERGLETVTVSE-SRQQFATGGWDCLLKIWSAD-------ISKERGD  241 (391)
Q Consensus       182 ------v~iwd~~~~~~~~------~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~-------~~~~~~~  241 (391)
                            |.+++... ....      ..+..+    .....++++| ++.++++-..++.|..+|+.       ++.....
T Consensus       217 ~~~~~~V~~i~r~~-~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp  291 (496)
T 3kya_A          217 GDESPSVYIIKRNA-DGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDP  291 (496)
T ss_dssp             GGGEEEEEEEECCT-TSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCC
T ss_pred             cccCceEEEEecCC-CCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecc
Confidence                  44554221 0121      222222    2345778899 45555666677889999986       3221000


Q ss_pred             CCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecc--cCce--eEEEECC
Q psy2107         242 PSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAE--LGGM--KSEIVGN  315 (391)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~--~~~~--~~~~~~~  315 (391)
                      .....              . .....+... ........++|+|++. |+.+ +..+.|+.++..  .+..  ...+.+.
T Consensus       292 ~~~~~--------------~-g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~  355 (496)
T 3kya_A          292 IVKNN--------------P-NTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG  355 (496)
T ss_dssp             BGGGC--------------T-TTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB
T ss_pred             ccccc--------------c-cccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC
Confidence            00000              0 000011111 1233457899997765 5555 456788886643  3321  1222211


Q ss_pred             ----------------eeeE-EEEEC-------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc------------
Q psy2107         316 ----------------KSFF-DVHYS-------PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH------------  359 (391)
Q Consensus       316 ----------------~~i~-~~~~~-------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h------------  359 (391)
                                      .... .++..       +++.++++=..+.+|+.++. .+.    +.++.+.            
T Consensus       356 ~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G~----v~TiaG~g~~~~~~~~~~~  430 (496)
T 3kya_A          356 YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EGI----VSTYAGRGASTSLADGNQW  430 (496)
T ss_dssp             TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TCB----EEEEEESCTTHHHHHSCSC
T ss_pred             CCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CCC----EEEEecccccccccCcccc
Confidence                            0123 44444       45667776677889999984 332    2222211            


Q ss_pred             ------------cCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         360 ------------KEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       360 ------------~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                                  -.....|+++++++.++++=.....|+.+++
T Consensus       431 G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~  473 (496)
T 3kya_A          431 GTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM  473 (496)
T ss_dssp             CCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence                        1347899999854677777777888998875

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.53  E-value=0.26  Score=41.42  Aligned_cols=92  Identities=11%  Similarity=0.073  Sum_probs=45.9

Q ss_pred             cCCeEEEEEC-C-----CeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCC-----cEEEEcCCCCCcc
Q psy2107         285 AVDEIITSSW-D-----HTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADK-----QIRLYDPKVKEGA  350 (391)
Q Consensus       285 ~~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg-----~i~iwd~~~~~~~  350 (391)
                      .+..++.|+. +     ..+.+||..+.+-...-..+.   ...++.+  ++++++.|+.++     .+.+||+.+..-.
T Consensus       148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~  225 (315)
T 4asc_A          148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA  225 (315)
T ss_dssp             TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred             CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence            3344556654 2     468889988764322211111   1122222  567777776554     5888998765422


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                       .+..+.........+.+   ++.+++.|+.+
T Consensus       226 -~~~~~p~~r~~~~~~~~---~~~l~v~GG~~  253 (315)
T 4asc_A          226 -PFEAFPQERSSLSLVSL---VGTLYAIGGFA  253 (315)
T ss_dssp             -EECCCSSCCBSCEEEEE---TTEEEEEEEEE
T ss_pred             -ECCCCCCcccceeEEEE---CCEEEEECCcc
Confidence             12122212222233333   45677777764

>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*

Probab=96.50  E-value=0.55  Score=43.86  Aligned_cols=194  Identities=9%  Similarity=-0.020  Sum_probs=114.2

Q ss_pred             CcEEEEEec--CC-EEEEEECCCeEEEEcCCCceEEeccC-CCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCC
Q psy2107         117 DWVSAIDFH--ND-WILTGCYDHSVHIWTRRGEHKLNIPG-HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN  192 (391)
Q Consensus       117 ~~V~~~~~~--~~-~l~t~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~  192 (391)
                      ..+.+|+|+  .+ ++++-..++.|+.+++++.....+.. .......+++.+  ..+++.++-...+.|.+.+++  ..
T Consensus        37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~--~~~~LY~tD~~~~~I~v~~~d--G~  112 (628)
T 4a0p_A           37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDW--LGKNLYWADTGTNRIEVSKLD--GQ  112 (628)
T ss_dssp             SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEET--TTTEEEEEETTTTEEEEEETT--ST
T ss_pred             CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEe--CCCEEEEEECCCCEEEEEecC--CC
Confidence            356788887  33 55565677899999986654333322 223466777732  245566666667888888853  22


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      ....+  +...-.....|++.|....|.....  .+.|...+++...                              ...
T Consensus       113 ~~~~l--~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~------------------------------~~~  160 (628)
T 4a0p_A          113 HRQVL--VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE------------------------------RTT  160 (628)
T ss_dssp             TCEEE--ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS------------------------------CEE
T ss_pred             cEEEE--EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc------------------------------eEE
Confidence            22222  2233456789999986555555542  4677777765411                              111


Q ss_pred             ecCccCcccEEEecc-CCeEEEEE-CCCeEEEEecccCceeEEEE-CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         271 LKGHKEAISAVQWTA-VDEIITSS-WDHTLKIWDAELGGMKSEIV-GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~-~~~l~s~~-~dg~i~iwd~~~~~~~~~~~-~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      +...-.....+++++ .+.|+.+. ..+.|..+|+..... ..+. .-.....+++.. +.++++-...+.|...|..++
T Consensus       161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg  238 (628)
T 4a0p_A          161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG  238 (628)
T ss_dssp             EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred             EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence            112234567888884 56666664 567899999865433 2222 222345677754 445555555788888886655


Q ss_pred             C
Q psy2107         348 E  348 (391)
Q Consensus       348 ~  348 (391)
                      +
T Consensus       239 ~  239 (628)
T 4a0p_A          239 Q  239 (628)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=96.32  E-value=0.45  Score=40.88  Aligned_cols=237  Identities=10%  Similarity=0.006  Sum_probs=118.9

Q ss_pred             cEEEEEec-CCEEEEEECCCeEEEEcCCCc-eEEecc---CCCCCeeEEEEEecCC-CCeEEEEEeC---C----CcEEE
Q psy2107         118 WVSAIDFH-NDWILTGCYDHSVHIWTRRGE-HKLNIP---GHGGPVKGVAWLYNDG-KDAAFISVST---D----QTAMI  184 (391)
Q Consensus       118 ~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~-~~~~~~---~~~~~v~~l~~~~~~~-~~~~l~s~~~---d----g~v~i  184 (391)
                      .-..++|. ...|+.+..+|.|++++.++. .+..+.   ........|++.|.-. ++.+.++-+.   +    ..|..
T Consensus        30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r  109 (354)
T 3a9g_A           30 VPWSIAPLGGGRYLVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIR  109 (354)
T ss_dssp             CEEEEEEEETTEEEEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEE
T ss_pred             CCeEEEEcCCCeEEEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEE
Confidence            34577886 235666677799999986554 222221   1234578899933211 2444444332   3    45666


Q ss_pred             EeecCCCCce---eEE-EEEec-CCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCCCCCCC
Q psy2107         185 WEWKVESNSI---ECI-HVCRG-HERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGDPSENG  246 (391)
Q Consensus       185 wd~~~~~~~~---~~~-~~~~~-~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~~~~~~  246 (391)
                      |+........   +.+ ..+.. .......|+|.|+|.++++-+..             |.|.-++.+..-.     .  
T Consensus       110 ~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p-----~--  182 (354)
T 3a9g_A          110 GRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP-----A--  182 (354)
T ss_dssp             EEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC-----T--
T ss_pred             EEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC-----C--
Confidence            6643221111   111 11221 11234679999999877664432             2333333321000     0  


Q ss_pred             CCCccccccccccccCCCC-CceeeecCccCcccEEEecc-CCeEEEEECCC----eEEEEecccC--------------
Q psy2107         247 DEGTTSKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTA-VDEIITSSWDH----TLKIWDAELG--------------  306 (391)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~l~s~~~dg----~i~iwd~~~~--------------  306 (391)
                                     .... .....-.++.. ...++|++ .+.|+++....    .|.+..  .+              
T Consensus       183 ---------------~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~  244 (354)
T 3a9g_A          183 ---------------DNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGR  244 (354)
T ss_dssp             ---------------TSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCC
T ss_pred             ---------------CCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCC
Confidence                           0000 01111223333 46788997 67777765432    233322  11              


Q ss_pred             ----ceeEEE-ECCeeeEEEEEC-------CCCCEEEEeeCCCcEEEEcCCCCCcceEEEE-eccccCcEEEEEECCCCC
Q psy2107         307 ----GMKSEI-VGNKSFFDVHYS-------PLSKLVITASADKQIRLYDPKVKEGAIVKST-FSSHKEWVQSVRWSPIDP  373 (391)
Q Consensus       307 ----~~~~~~-~~~~~i~~~~~~-------p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~  373 (391)
                          .++..+ ..+.....++|.       .+|.++++....+.|...++.......-... +.+-...+..+++.|++ 
T Consensus       245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG-  323 (354)
T 3a9g_A          245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG-  323 (354)
T ss_dssp             TTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS-
T ss_pred             CCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC-
Confidence                122232 223456778883       4577777766677888888764211111122 22334578999999954 


Q ss_pred             CEEEEee
Q psy2107         374 QLFVSAS  380 (391)
Q Consensus       374 ~~l~s~~  380 (391)
                      .++++..
T Consensus       324 ~lyv~~~  330 (354)
T 3a9g_A          324 GILISTS  330 (354)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEe
Confidence            5555553

>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}

Probab=96.32  E-value=0.39  Score=40.14  Aligned_cols=189  Identities=9%  Similarity=0.053  Sum_probs=94.9

Q ss_pred             EEEecCCEEEEEECC----CeEEEEcCCCceEEec---cCCCCCeeEEEEEecCCCCeEEEEEeCC------CcEEEEee
Q psy2107         121 AIDFHNDWILTGCYD----HSVHIWTRRGEHKLNI---PGHGGPVKGVAWLYNDGKDAAFISVSTD------QTAMIWEW  187 (391)
Q Consensus       121 ~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~---~~~~~~v~~l~~~~~~~~~~~l~s~~~d------g~v~iwd~  187 (391)
                      ++.+.+.+++.|+.+    ..+.+||.....-..+   ........++.+     ++.+++.|+.+      ..+.+||.
T Consensus        51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~~~d~  125 (306)
T 3ii7_A           51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-----EGKIYTSGGSEVGNSALYLFECYDT  125 (306)
T ss_dssp             EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-----TTEEEEECCBBTTBSCCCCEEEEET
T ss_pred             EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-----CCEEEEECCCCCCCcEeeeEEEEeC
Confidence            334567777777755    6788899855433322   221222222333     56677777765      45777774


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC---------CCcEEEEECCCCCCCCCCCCCCCCCccccccccc
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW---------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKE  258 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (391)
                        ....+..+..+........++.+  ++++++.|+.         -..+.+||+.+.+-.                   
T Consensus       126 --~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~-------------------  182 (306)
T 3ii7_A          126 --RTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT-------------------  182 (306)
T ss_dssp             --TTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEE-------------------
T ss_pred             --CCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEE-------------------
Confidence              45555554333322222222222  5666676654         244778887653211                   


Q ss_pred             cccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECC--e-eeEEEEECCCCCEE
Q psy2107         259 YSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGN--K-SFFDVHYSPLSKLV  330 (391)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--~-~i~~~~~~p~~~~l  330 (391)
                              .+..+...... .++....+..++.|+.+     ..+.+||+.+.+-...-..+  . ...++.+  +++++
T Consensus       183 --------~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~  251 (306)
T 3ii7_A          183 --------ELCPMIEARKN-HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVY  251 (306)
T ss_dssp             --------EECCCSSCCBS-CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEE
T ss_pred             --------ECCCccchhhc-ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEE
Confidence                    01011111111 12222233445555543     46888998876432221111  1 1222333  56777


Q ss_pred             EEeeCC-----CcEEEEcCCCCC
Q psy2107         331 ITASAD-----KQIRLYDPKVKE  348 (391)
Q Consensus       331 ~~g~~d-----g~i~iwd~~~~~  348 (391)
                      +.|+.+     ..+.+||+.+.+
T Consensus       252 v~GG~~~~~~~~~~~~yd~~~~~  274 (306)
T 3ii7_A          252 VLAGFQGVGRLGHILEYNTETDK  274 (306)
T ss_dssp             EEECBCSSSBCCEEEEEETTTTE
T ss_pred             EEeCcCCCeeeeeEEEEcCCCCe
Confidence            777744     568899987754

>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A

Probab=96.20  E-value=0.31  Score=40.83  Aligned_cols=188  Identities=11%  Similarity=0.117  Sum_probs=92.4

Q ss_pred             EecCCEEEEEEC----C-----CeEEEEcCCCceEEeccC---CCCCeeEEEEEecCCCCeEEEEEeCC-----CcEEEE
Q psy2107         123 DFHNDWILTGCY----D-----HSVHIWTRRGEHKLNIPG---HGGPVKGVAWLYNDGKDAAFISVSTD-----QTAMIW  185 (391)
Q Consensus       123 ~~~~~~l~t~~~----d-----g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~~~~l~s~~~d-----g~v~iw  185 (391)
                      ...+.+++.|+.    +     ..+.+||.....-..+..   ......++.+     ++.+++.|+.+     ..+.+|
T Consensus        68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~~y  142 (308)
T 1zgk_A           68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI-----DGHIYAVGGSHGCIHHNSVERY  142 (308)
T ss_dssp             EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE-----TTEEEEECCEETTEECCCEEEE
T ss_pred             EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE-----CCEEEEEcCCCCCcccccEEEE
Confidence            445666776665    2     468888886554433321   1112222333     56677777644     356677


Q ss_pred             eecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         186 EWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD-----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      |.  .+..+..+..+........++.+  ++++++.|+.+     ..+.+||+.+.+-..                    
T Consensus       143 d~--~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~--------------------  198 (308)
T 1zgk_A          143 EP--ERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM--------------------  198 (308)
T ss_dssp             ET--TTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE--------------------
T ss_pred             CC--CCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee--------------------
Confidence            73  34455544333322222223333  56677777754     457788876533210                    


Q ss_pred             cCCCCCceeeecCccCcccEEEeccCCeEEEEECC-----CeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEe
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-----HTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITA  333 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g  333 (391)
                             +..+...... .++....+..++.|+.+     ..+.+||+.+.+-...-..+.  .-.+++.. ++++++.|
T Consensus       199 -------~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G  269 (308)
T 1zgk_A          199 -------ITAMNTIRSG-AGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLG  269 (308)
T ss_dssp             -------CCCCSSCCBS-CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred             -------CCCCCCcccc-ceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEc
Confidence                   0001111111 12222244445666554     568899988764332211111  11122222 56777777


Q ss_pred             eCC-----CcEEEEcCCCCC
Q psy2107         334 SAD-----KQIRLYDPKVKE  348 (391)
Q Consensus       334 ~~d-----g~i~iwd~~~~~  348 (391)
                      +.+     ..+.+||+.+.+
T Consensus       270 G~~~~~~~~~v~~yd~~~~~  289 (308)
T 1zgk_A          270 GYDGHTFLDSVECYDPDTDT  289 (308)
T ss_dssp             CBCSSCBCCEEEEEETTTTE
T ss_pred             CcCCCcccceEEEEcCCCCE
Confidence            644     457788877643

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=96.09  E-value=0.44  Score=40.85  Aligned_cols=94  Identities=7%  Similarity=-0.003  Sum_probs=47.1

Q ss_pred             EecCCEEEEEECC-CeEEEEcCCC--ceEEeccCC----CCCeeEEEEEecCCCCeEEEEEeC-C---------CcEEEE
Q psy2107         123 DFHNDWILTGCYD-HSVHIWTRRG--EHKLNIPGH----GGPVKGVAWLYNDGKDAAFISVST-D---------QTAMIW  185 (391)
Q Consensus       123 ~~~~~~l~t~~~d-g~i~iwd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~~~~l~s~~~-d---------g~v~iw  185 (391)
                      ...+.+++.|+.+ ..+.+||...  ..-..+..-    .....++.+     ++.+++.|+. +         ..+.+|
T Consensus        17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~~~v~~y   91 (357)
T 2uvk_A           17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-----DGNLYVFGGIGKNSEGLTQVFNDVHKY   91 (357)
T ss_dssp             EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-----TTEEEEECCEEECTTSCEEECCCEEEE
T ss_pred             EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-----CCEEEEEcCCCCCCCccceeeccEEEE
Confidence            3456666666644 4688888842  222222211    111222333     4667777765 2         357777


Q ss_pred             eecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         186 EWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       186 d~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      |  ..+..+..+.... .......++.  .++++++.|+.+
T Consensus        92 d--~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~  128 (357)
T 2uvk_A           92 N--PKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN  128 (357)
T ss_dssp             E--TTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred             e--CCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence            7  4455555443332 1122222222  466777888764

>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}

Probab=96.08  E-value=0.46  Score=39.89  Aligned_cols=107  Identities=10%  Similarity=0.075  Sum_probs=54.8

Q ss_pred             EEEecCCEEEEEEC----C-------CeEEEEcCCCceEEeccCCCCC---eeEEEEEecCCCCeEEEEEeCC-------
Q psy2107         121 AIDFHNDWILTGCY----D-------HSVHIWTRRGEHKLNIPGHGGP---VKGVAWLYNDGKDAAFISVSTD-------  179 (391)
Q Consensus       121 ~~~~~~~~l~t~~~----d-------g~i~iwd~~~~~~~~~~~~~~~---v~~l~~~~~~~~~~~l~s~~~d-------  179 (391)
                      ++...+.+++.|+.    +       ..+.+||.....-..+.....+   ...+.+     ++.+++.|+.+       
T Consensus        41 ~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~lyv~GG~~~~~~~~~  115 (315)
T 4asc_A           41 LVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-----LNSIYVVGGREIKDGERC  115 (315)
T ss_dssp             EECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-----TTEEEEECCEESSTTCCB
T ss_pred             EEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-----CCEEEEEeCCcCCCCCcc
Confidence            33445777777874    1       1277788865443333221111   112222     55677777632       


Q ss_pred             -CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-C-----CcEEEEECCCC
Q psy2107         180 -QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-D-----CLLKIWSADIS  236 (391)
Q Consensus       180 -g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-d-----g~i~iwd~~~~  236 (391)
                       ..+.+||.  .+..+..+..+........++.  -++++++.|+. +     ..+.+||..+.
T Consensus       116 ~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  175 (315)
T 4asc_A          116 LDSVMCYDR--LSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKF  175 (315)
T ss_dssp             CCCEEEEET--TTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred             cceEEEECC--CCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence             35777774  4445554433332222222222  35567777776 2     45788887653

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=96.05  E-value=0.48  Score=39.86  Aligned_cols=82  Identities=20%  Similarity=0.308  Sum_probs=40.2

Q ss_pred             CeEEEEecccCceeEEEECCe--eeEEEEECCCCCEEEEeeCC-----CcEEEEcCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         296 HTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASAD-----KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~--~i~~~~~~p~~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      ..+.+||+.+.+-...-....  .-.+++.. ++++++.|+.+     ..+.+||+.+..-. .+..+.........+.+
T Consensus       175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~  252 (318)
T 2woz_A          175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWE-VMTEFPQERSSISLVSL  252 (318)
T ss_dssp             CCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEE-ECCCCSSCCBSCEEEEE
T ss_pred             ceEEEEcCCCCEEEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEE-ECCCCCCcccceEEEEE
Confidence            358899988765332211111  11122222 46777777543     35778998765422 11122222222223333


Q ss_pred             CCCCCCEEEEeeCC
Q psy2107         369 SPIDPQLFVSASFD  382 (391)
Q Consensus       369 ~~~~~~~l~s~~~d  382 (391)
                         ++.+++.||.+
T Consensus       253 ---~~~i~v~GG~~  263 (318)
T 2woz_A          253 ---AGSLYAIGGFA  263 (318)
T ss_dssp             ---TTEEEEECCBC
T ss_pred             ---CCEEEEECCee
Confidence               45677777764

>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A

Probab=95.99  E-value=0.71  Score=40.25  Aligned_cols=110  Identities=10%  Similarity=0.086  Sum_probs=75.3

Q ss_pred             cccEEEeccCCeEEEEECCCeEEEEecccCc------------eeEEEEC-------CeeeEEEEECCC---CCEEEEee
Q psy2107         277 AISAVQWTAVDEIITSSWDHTLKIWDAELGG------------MKSEIVG-------NKSFFDVHYSPL---SKLVITAS  334 (391)
Q Consensus       277 ~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~-------~~~i~~~~~~p~---~~~l~~g~  334 (391)
                      .|..+..+|+|.+++-..+..|.|-.+..+.            ..+.+..       ..+|..+.|+|-   +..|++-.
T Consensus        67 ~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt  146 (452)
T 3pbp_A           67 DTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK  146 (452)
T ss_dssp             TTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE
T ss_pred             ceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe
Confidence            5778999998988888888899999887322            1223332       347999999996   45888889


Q ss_pred             CCCcEEEEcCCCCCcceE-E------EEeccccCcEEEEEECCCCCCEEEEe--eCCCcEEE
Q psy2107         335 ADKQIRLYDPKVKEGAIV-K------STFSSHKEWVQSVRWSPIDPQLFVSA--SFDNSVKL  387 (391)
Q Consensus       335 ~dg~i~iwd~~~~~~~~~-~------~~~~~h~~~v~~~~~~~~~~~~l~s~--~~dg~v~i  387 (391)
                      .|+.|++||+......+. .      .....+...|.+++|.+ ++..|...  +..|.|+-
T Consensus       147 sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDIYA  207 (452)
T 3pbp_A          147 EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDIFA  207 (452)
T ss_dssp             TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEEEE
T ss_pred             cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCEEE
Confidence            999999999976322111 1      01112235789999998 66555553  47777753

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.76  E-value=0.53  Score=36.97  Aligned_cols=149  Identities=9%  Similarity=0.042  Sum_probs=80.8

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEE
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQ  282 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~  282 (391)
                      ..++.++|+|++.+.++  .+|.+.-.+..+.....                  +     ...-..+-  +.. .-.++.
T Consensus        41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~------------------W-----~~s~t~IG~~Gw~-~F~a~~   94 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN------------------W-----MGRAKKIGNGGWN-QFQFLF   94 (236)
T ss_dssp             TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC------------------H-----HHHCEEEECSCGG-GCSEEE
T ss_pred             ccceeEEECCCccEEEE--eCCeEEEECCCCCCccc------------------c-----cccccEecccccc-cceEEE
Confidence            47889999999986666  66765554442211100                  0     00001110  111 147888


Q ss_pred             eccCCeEEEEECCCeEEEEecccCcee-----EEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcc----
Q psy2107         283 WTAVDEIITSSWDHTLKIWDAELGGMK-----SEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGA----  350 (391)
Q Consensus       283 ~~~~~~l~s~~~dg~i~iwd~~~~~~~-----~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~----  350 (391)
                      |.+++.|+++ .||.|.-++-.+....     .+.-+.   ..+..+.+.|+|.+.++.  |+.++-....+....    
T Consensus        95 fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~  171 (236)
T 1tl2_A           95 FDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLA  171 (236)
T ss_dssp             ECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHH
T ss_pred             ECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCccccc
Confidence            8899998888 6799987775332111     111111   367899999999988877  777654433321110    


Q ss_pred             eEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         351 IVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       351 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      .....-...-..-+.+.|.+ ++.+.+..  +|.+
T Consensus       172 ~~~~~g~~g~~~yr~l~f~~-~G~l~~v~--~g~~  203 (236)
T 1tl2_A          172 RATKIGQGGWDTFKFLFFSS-VGTLFGVQ--GGKF  203 (236)
T ss_dssp             HCEEEESSSGGGEEEEEECT-TSCEEEEE--TTEE
T ss_pred             ccceeccCCcceEEEEEECC-CCcEEEEe--CCeE
Confidence            00111112333456677988 65544433  6644

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=95.68  E-value=0.84  Score=38.71  Aligned_cols=109  Identities=11%  Similarity=0.015  Sum_probs=61.9

Q ss_pred             CCEEEEEECCCeEEEEcC-CCceEEeccCC-CCCeeEEEEEecCC-CCeEEEEE-eCCCcEEEEeecCCCCceeEEEEEe
Q psy2107         126 NDWILTGCYDHSVHIWTR-RGEHKLNIPGH-GGPVKGVAWLYNDG-KDAAFISV-STDQTAMIWEWKVESNSIECIHVCR  201 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~-~~~v~~l~~~~~~~-~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~  201 (391)
                      ++.++.++.||.|.-.|. +++...++... ..++....- +..+ ++..++.. +.||.|..++..  .+  .....+.
T Consensus        10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~-~~~~~~~~~~vv~p~~dG~l~a~~~~--~G--~~~~~~~   84 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQE-PSRLETYETLIIEPFGDGNIYYFNAH--QG--LQKLPLS   84 (339)
T ss_dssp             EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCC-SCTTTSSEEEEECCSTTTEEEEEETT--TE--EEEEEEE
T ss_pred             CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecC-CccccCCcEEEEEECCCCEEEEEECC--CC--cEEeeec
Confidence            558899999999999998 67777776543 122222110 1111 22334333 579999888843  22  2222222


Q ss_pred             c----CCCCeEE---EEE-c----CCCCEEEEEeCCCcEEEEECCCCCCC
Q psy2107         202 G----HERGLET---VTV-S----ESRQQFATGGWDCLLKIWSADISKER  239 (391)
Q Consensus       202 ~----~~~~v~~---l~~-~----~~~~~l~sg~~dg~i~iwd~~~~~~~  239 (391)
                      .    ...++..   ... .    ..+..+++|+.+|.+...|.++++..
T Consensus        85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~  134 (339)
T 2be1_A           85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII  134 (339)
T ss_dssp             HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred             cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence            1    1112221   000 0    03457889999999999999887753

>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}

Probab=95.63  E-value=0.66  Score=39.71  Aligned_cols=54  Identities=9%  Similarity=0.158  Sum_probs=29.6

Q ss_pred             EEEecCCEEEEEEC-C---------CeEEEEcCCCceEEeccCCC-C---CeeEEEEEecCCCCeEEEEEeCC
Q psy2107         121 AIDFHNDWILTGCY-D---------HSVHIWTRRGEHKLNIPGHG-G---PVKGVAWLYNDGKDAAFISVSTD  179 (391)
Q Consensus       121 ~~~~~~~~l~t~~~-d---------g~i~iwd~~~~~~~~~~~~~-~---~v~~l~~~~~~~~~~~l~s~~~d  179 (391)
                      ++.+.+.+++.|+. +         ..+.+||.....-..+.... .   ...++.+     ++.+++.|+.+
T Consensus        61 ~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~  128 (357)
T 2uvk_A           61 SAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVH-----NGKAYVTGGVN  128 (357)
T ss_dssp             EEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEE-----TTEEEEEECCC
T ss_pred             EEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEE-----CCEEEEEeCcC
Confidence            33445667777765 2         46888998654433332211 1   1222333     56778888765

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=95.53  E-value=0.71  Score=46.84  Aligned_cols=177  Identities=12%  Similarity=0.132  Sum_probs=102.1

Q ss_pred             CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC----CCCeEE
Q psy2107         134 YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH----ERGLET  209 (391)
Q Consensus       134 ~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~~~v~~  209 (391)
                      ...++.|+|+..+....-.....+|.-=.|.  +++  .|+-.+ +..|..|++..   ...++..+..|    ...|..
T Consensus        84 ag~~lQiFnl~~k~klks~~~~e~VvfWkWi--s~~--~l~lVT-~~aVyHW~~~~---~s~P~k~fdR~~~L~~~QIin  155 (1630)
T 1xi4_A           84 AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI--SLN--TVALVT-DNAVYHWSMEG---ESQPVKMFDRHSSLAGCQIIN  155 (1630)
T ss_pred             cCCeEEEeehHHhhhhcccccCCCceEEEec--CCC--eeEEEc-CCeEEEeccCC---CCccHHHHhcchhcccCeeEE
Confidence            3679999999544333322345567777775  223  333333 56799999642   23444444444    346777


Q ss_pred             EEEcCCCCEEEEEe-------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         210 VTVSESRQQFATGG-------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       210 l~~~~~~~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      -..+++.++++..|       -.|.+.+|..+..                              ..+.+.||......+.
T Consensus       156 Y~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~------------------------------~sQ~iegha~~F~~~~  205 (1630)
T 1xi4_A          156 YRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK------------------------------VSQPIEGHAASFAQFK  205 (1630)
T ss_pred             eeeCCCCCeEEEEeeccCCCcccceeeeeecccc------------------------------cchhhhHhHhhhheec
Confidence            77788888776433       3477888887642                              2334455555444443


Q ss_pred             ec----cCCeEEEEE---CCCeEEEEecccC---ceeEE-------EEC---CeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         283 WT----AVDEIITSS---WDHTLKIWDAELG---GMKSE-------IVG---NKSFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       283 ~~----~~~~l~s~~---~dg~i~iwd~~~~---~~~~~-------~~~---~~~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                      ..    +...++.+.   ..+.++|-++...   .....       +..   ..-..++..++....+..-+.-|.|++|
T Consensus       206 ~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~  285 (1630)
T 1xi4_A          206 MEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLY  285 (1630)
T ss_pred             cCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEE
Confidence            33    111222221   1368888887543   11111       000   1123467778777778888889999999


Q ss_pred             cCCCCC
Q psy2107         343 DPKVKE  348 (391)
Q Consensus       343 d~~~~~  348 (391)
                      |+.++.
T Consensus       286 d~~t~~  291 (1630)
T 1xi4_A          286 DLETGT  291 (1630)
T ss_pred             ecccch
Confidence            999876

>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*

Probab=95.49  E-value=0.15  Score=40.08  Aligned_cols=105  Identities=10%  Similarity=0.051  Sum_probs=64.4

Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccCcee------EEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK------SEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      ..+..++|+|++.|++. .+|.+.-.+..+....      ..+-  .-.....+.|.|+|.+.++  .||.|+-++..+.
T Consensus        41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~  117 (236)
T 1tl2_A           41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS  117 (236)
T ss_dssp             TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred             ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence            36779999999998888 7888777666442211      1111  1112478899999998887  4699988886442


Q ss_pred             CcceE----EEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         348 EGAIV----KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       348 ~~~~~----~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      .....    ...-..-=..+..|.+.| ++.+.+. . |+.++
T Consensus       118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p-~G~Lyav-~-dg~ly  157 (236)
T 1tl2_A          118 DTDNWIARATEVGSGGWSGFKFLFFHP-NGYLYAV-H-GQQFY  157 (236)
T ss_dssp             TTCCHHHHSEEEECSSGGGEEEEEECT-TSCEEEE-E-TTEEE
T ss_pred             CCCceeccccEeccCCCCceEEEEECC-CceEEEE-e-CCcEE
Confidence            21110    000111114579999999 6654444 4 77753

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=95.45  E-value=0.72  Score=43.73  Aligned_cols=191  Identities=13%  Similarity=0.093  Sum_probs=93.5

Q ss_pred             CCeEEEEEeCC----CcEEEEeecCCCCceeEEE-E-----EecCCCCeEEEEEcCCCCEEEEEeCCC------cEEEEE
Q psy2107         169 KDAAFISVSTD----QTAMIWEWKVESNSIECIH-V-----CRGHERGLETVTVSESRQQFATGGWDC------LLKIWS  232 (391)
Q Consensus       169 ~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~-~-----~~~~~~~v~~l~~~~~~~~l~sg~~dg------~i~iwd  232 (391)
                      ++.+++.|+.+    ..+.+||..  ...+..+. .     .......-.++.+..++++++.||.++      .+.+||
T Consensus       397 ~~~iyv~GG~~~~~~~~v~~yd~~--~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd  474 (695)
T 2zwa_A          397 GNDVFYMGGSNPYRVNEILQLSIH--YDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD  474 (695)
T ss_dssp             SSCEEEECCBSSSBCCCEEEEEEC--SSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred             CCEEEEECCCCCCCcCcEEEEECC--CCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence            45567777653    356777744  45555544 2     111122223333322677777877543      466777


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCC--eEEEEecccCceeE
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDH--TLKIWDAELGGMKS  310 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~  310 (391)
                      ..+.+-.                           .+..+......-.++.+..+..++.|+.++  .+.+||..+..-..
T Consensus       475 ~~t~~W~---------------------------~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~  527 (695)
T 2zwa_A          475 MKTREWS---------------------------MIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKD  527 (695)
T ss_dssp             TTTTEEE---------------------------ECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred             CCCCcEE---------------------------ECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence            7652211                           000111111111222223445566676544  68999988765332


Q ss_pred             EEE---C--C-eeeEEEEECCC-CCEEEEeeC--C-----CcEEEEcCCCCCc-----ceEEEEec-cccCcEEEEEECC
Q psy2107         311 EIV---G--N-KSFFDVHYSPL-SKLVITASA--D-----KQIRLYDPKVKEG-----AIVKSTFS-SHKEWVQSVRWSP  370 (391)
Q Consensus       311 ~~~---~--~-~~i~~~~~~p~-~~~l~~g~~--d-----g~i~iwd~~~~~~-----~~~~~~~~-~h~~~v~~~~~~~  370 (391)
                      .-.   .  . ....++.+..+ +++++.|+.  +     +.+.+||+.+...     ...+.... ........+.+. 
T Consensus       528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~-  606 (695)
T 2zwa_A          528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYIT-  606 (695)
T ss_dssp             CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEE-
T ss_pred             ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeC-
Confidence            211   0  1 12233455554 667777765  2     4588999877651     11222211 111222333332 


Q ss_pred             CCCCEEEEeeCC--------CcEEEEec
Q psy2107         371 IDPQLFVSASFD--------NSVKLWDL  390 (391)
Q Consensus       371 ~~~~~l~s~~~d--------g~v~iwdl  390 (391)
                       ++.+++.||.+        ..|.+||+
T Consensus       607 -~~~iyv~GG~~~~~~~~~~~~v~~yd~  633 (695)
T 2zwa_A          607 -PRKLLIVGGTSPSGLFDRTNSIISLDP  633 (695)
T ss_dssp             -TTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred             -CCEEEEECCccCCCCCCCCCeEEEEEC
Confidence             25678888753        45777775

>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*

Probab=95.41  E-value=0.34  Score=41.64  Aligned_cols=103  Identities=10%  Similarity=0.104  Sum_probs=62.3

Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccCc-eeEEEE----CCeeeEEEEECCC---CCEEEEeeC----C----CcE
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGG-MKSEIV----GNKSFFDVHYSPL---SKLVITASA----D----KQI  339 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~----~~~~i~~~~~~p~---~~~l~~g~~----d----g~i  339 (391)
                      .....++|.+++.++.+..+|.|+++| .+++ .+..+.    .......++++|+   +..|.++..    +    +.|
T Consensus        29 ~~P~~ia~~pdG~l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v  107 (354)
T 3a9g_A           29 EVPWSIAPLGGGRYLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV  107 (354)
T ss_dssp             SCEEEEEEEETTEEEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred             CCCeEEEEcCCCeEEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence            345789999889999998899999997 4454 111111    2246789999997   444444332    2    567


Q ss_pred             EEEcCCCCC-----cceEEEEec-cccCcEEEEEECCCCCCEEEEee
Q psy2107         340 RLYDPKVKE-----GAIVKSTFS-SHKEWVQSVRWSPIDPQLFVSAS  380 (391)
Q Consensus       340 ~iwd~~~~~-----~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~  380 (391)
                      ..|+.....     ...+...+. ........|+|.| ++.++++.+
T Consensus       108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G  153 (354)
T 3a9g_A          108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTG  153 (354)
T ss_dssp             EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECC
T ss_pred             EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEEC
Confidence            777765431     111222222 1112346799999 556777654

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=95.40  E-value=2  Score=41.16  Aligned_cols=220  Identities=10%  Similarity=0.094  Sum_probs=121.0

Q ss_pred             CCcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEecc----CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         116 DDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIP----GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       116 ~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~----~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      ...|+||.-+ ..++-.|+.+| +..||-..  ...+.    .....|.++..   +.++ .|..|+.+| +..||..  
T Consensus        21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~--~~~~~~~~~~~~~~i~~i~~---d~~g-~lWigT~~G-l~~yd~~--   90 (758)
T 3ott_A           21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYS--TQQHFTYGENNNTRIYCGVI---IDNT-YLYMGTDNG-ILVYNYR--   90 (758)
T ss_dssp             CCCEEEEEECTTSCEEEEESSC-EEEECSSC--EEECSCTTSTTSSCEEEEEE---ETTT-EEEEEETTE-EEEEETT--
T ss_pred             cceEEEEEECCCCCEEEEECCC-ccccCCCc--eEEEEccCCCCCceEEEEEE---cCCC-cEEEEeCCC-eEEEeCC--
Confidence            4579999988 34666777887 55566322  11111    12346777765   4444 566666655 7788843  


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      ......  ........|.++.. .++ .|..|+.+ -|..+|..+.+.                              ..
T Consensus        91 ~~~f~~--~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~------------------------------~~  135 (758)
T 3ott_A           91 ADRYEQ--PETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKL------------------------------TS  135 (758)
T ss_dssp             TTEECC--CSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCE------------------------------EE
T ss_pred             CCEEEC--cccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeE------------------------------EE
Confidence            222111  11111235777654 344 46666666 577888754221                              11


Q ss_pred             e-----cCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-------eeeEEEEECCCCCEEEEeeCCCc
Q psy2107         271 L-----KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------KSFFDVHYSPLSKLVITASADKQ  338 (391)
Q Consensus       271 ~-----~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------~~i~~~~~~p~~~~l~~g~~dg~  338 (391)
                      +     ......|.++....++.+..++.. -+..+|..+++.. .+...       ..|.++...+++..|..|+. +.
T Consensus       136 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G  212 (758)
T 3ott_A          136 FDTRRNGLPNNTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY  212 (758)
T ss_dssp             ECHHHHCCSCSCEEEEEECTTCCEEEEETT-EEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred             eccCCCCcCCCeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence            1     011345777777767777777765 4777887665432 22211       23778887777775555654 45


Q ss_pred             EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      +..+|..+..-. ....+  ....|.++.... ++.+. .|+.+ -+.+++
T Consensus       213 l~~~~~~~~~~~-~~~~l--~~~~i~~i~~d~-~g~lW-igT~~-Gl~~~~  257 (758)
T 3ott_A          213 LFQYFPSTGQIK-QTEAF--HNNSIKSLALDG-NGDLL-AGTDN-GLYVYH  257 (758)
T ss_dssp             EEEEETTTTEEE-EEEEE--EEEEEEEEEECT-TCCEE-EEETT-EEEEEC
T ss_pred             CeEEcCCCCeEE-eccCC--CCCeEEEEEEcC-CCCEE-EEeCC-ceeEEe
Confidence            888887654311 11111  234588888877 44433 34444 455555

>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}

Probab=95.34  E-value=0.73  Score=38.71  Aligned_cols=105  Identities=9%  Similarity=0.095  Sum_probs=52.1

Q ss_pred             EecCCEEEEEEC----CC-------eEEEEcCCCceEEeccCCC---CCeeEEEEEecCCCCeEEEEEeCC-------Cc
Q psy2107         123 DFHNDWILTGCY----DH-------SVHIWTRRGEHKLNIPGHG---GPVKGVAWLYNDGKDAAFISVSTD-------QT  181 (391)
Q Consensus       123 ~~~~~~l~t~~~----dg-------~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~~~~l~s~~~d-------g~  181 (391)
                      ...+.+++.|+.    ++       .+.+||.....-..+....   .....+.+     ++.+++.|+.+       ..
T Consensus        54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~~~  128 (318)
T 2woz_A           54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-----DDKIYVVAGKDLQTEASLDS  128 (318)
T ss_dssp             CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-----TTEEEEEEEEBTTTCCEEEE
T ss_pred             EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-----CCEEEEEcCccCCCCcccce
Confidence            344677777773    12       2777887554444332211   11222222     56677777754       23


Q ss_pred             EEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCC
Q psy2107         182 AMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW------DCLLKIWSADIS  236 (391)
Q Consensus       182 v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~------dg~i~iwd~~~~  236 (391)
                      +.+||  ..+..+..+..+......-.++.  .++++++.|+.      -..+.+||+.+.
T Consensus       129 ~~~yd--~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~  185 (318)
T 2woz_A          129 VLCYD--PVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG  185 (318)
T ss_dssp             EEEEE--TTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred             EEEEe--CCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence            55666  44555555433222111112222  35666777764      235788888653

>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}

Probab=95.31  E-value=0.79  Score=39.31  Aligned_cols=30  Identities=10%  Similarity=0.032  Sum_probs=22.7

Q ss_pred             CCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy2107         205 RGLETVTVSESRQQFATGGWDCLLKIWSAD  234 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~  234 (391)
                      .....|+|.|+++.|+++...|.|++++.+
T Consensus        18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~   47 (353)
T 2g8s_A           18 DHPWALAFLPDNHGMLITLRGGELRHWQAG   47 (353)
T ss_dssp             SSEEEEEECSTTCCEEEEETTTEEEEEETT
T ss_pred             CCcEEEEEcCCCCEEEEEeCCceEEEEeCC
Confidence            356799999999834455677999998853

>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}

Probab=95.20  E-value=1.3  Score=37.90  Aligned_cols=71  Identities=7%  Similarity=-0.038  Sum_probs=43.4

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe---cCCCCeEEEEEcCC---CCEEEEEeC-C---
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR---GHERGLETVTVSES---RQQFATGGW-D---  225 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~---~~~l~sg~~-d---  225 (391)
                      ..-..++|   .+++.++++ ..+|.|.+++ .   .....+..+.   ........|+++|+   +..|..+.. .   
T Consensus        31 ~~P~~ia~---~pdG~l~V~-e~~g~I~~i~-~---g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~  102 (352)
T 2ism_A           31 EVPWALAF---LPDGGMLIA-ERPGRIRLFR-E---GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG  102 (352)
T ss_dssp             SCEEEEEE---CTTSCEEEE-ETTTEEEEEE-T---TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred             CCceEEEE---cCCCeEEEE-eCCCeEEEEE-C---CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence            34568999   677875554 5669888887 2   2333333222   12356889999998   444544433 2   


Q ss_pred             --CcEEEEECC
Q psy2107         226 --CLLKIWSAD  234 (391)
Q Consensus       226 --g~i~iwd~~  234 (391)
                        +.|..++..
T Consensus       103 ~~~~v~r~~~~  113 (352)
T 2ism_A          103 LRNQVVRLRHL  113 (352)
T ss_dssp             SEEEEEEEEEC
T ss_pred             CccEEEEEEeC
Confidence              567777765

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.97  E-value=1.9  Score=38.45  Aligned_cols=104  Identities=7%  Similarity=-0.022  Sum_probs=58.8

Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec------CccCc
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK------GHKEA  277 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  277 (391)
                      -.....|+|.|+|+++++-...+.|++++..++..                           ..+..+.      .....
T Consensus        26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~---------------------------~~~~~~~~~~~~~~g~~G   78 (454)
T 1cru_A           26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSV---------------------------KTVFQVPEIVNDADGQNG   78 (454)
T ss_dssp             CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---------------------------EEEEECTTCCCCTTSSCS
T ss_pred             CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE---------------------------eEEecCCccccccCCCCc
Confidence            34567999999998666644334688887543221                           0111111      12345


Q ss_pred             ccEEEecc----CCeEEEEEC-------------CCeEEEEecccC-------ceeEE-EEC--CeeeEEEEECCCCCEE
Q psy2107         278 ISAVQWTA----VDEIITSSW-------------DHTLKIWDAELG-------GMKSE-IVG--NKSFFDVHYSPLSKLV  330 (391)
Q Consensus       278 v~~~~~~~----~~~l~s~~~-------------dg~i~iwd~~~~-------~~~~~-~~~--~~~i~~~~~~p~~~~l  330 (391)
                      ...|+|+|    ++.|+.+..             ...|.-|++..+       +.+.. +..  .+....++|.|+|.+.
T Consensus        79 llgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Ly  158 (454)
T 1cru_A           79 LLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIY  158 (454)
T ss_dssp             EEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEE
T ss_pred             eeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEE
Confidence            66899997    566665543             235555655322       11111 221  2346889999999876


Q ss_pred             EEee
Q psy2107         331 ITAS  334 (391)
Q Consensus       331 ~~g~  334 (391)
                      ++.+
T Consensus       159 v~~G  162 (454)
T 1cru_A          159 YTIG  162 (454)
T ss_dssp             EEEC
T ss_pred             EEEC
Confidence            6643

>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B

Probab=94.97  E-value=1.3  Score=36.56  Aligned_cols=216  Identities=11%  Similarity=0.086  Sum_probs=108.7

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCC--CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRR--GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      .|..++......+.-. ||.|..|-..  ++.-... .....|..++.   .. ...++. . ||.|..|-.+....-..
T Consensus        25 ~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~-~~~~~i~~ia~---G~-~hs~~l-~-~G~v~~wG~n~~Gqlg~   96 (282)
T 3qhy_B           25 GVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPA-ATQSGVDAIAA---GN-YHSLAL-K-DGEVIAWGGNEDGQTTV   96 (282)
T ss_dssp             SCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCG-GGGSCCCEEEE---CS-SEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred             CCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCc-cCCCCEEEEEe---CC-CEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence            5777777655444446 9999999652  2211111 12335777776   32 333443 4 99999997432211111


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                      +    ..-...|..++...+.  .+.-. ||.|..|-.....+...                         +.    ...
T Consensus        97 P----~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~-------------------------~~----~~~  140 (282)
T 3qhy_B           97 P----AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTV-------------------------PA----EAQ  140 (282)
T ss_dssp             C----GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSC-------------------------CG----GGG
T ss_pred             C----cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCC-------------------------Cc----cCC
Confidence            1    0113467777776543  33444 89999997654222110                         00    012


Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      ..|..++-.....++. . ||.|..|-.... ++-........|..++..... .++.  .||.|+.|-........   
T Consensus       141 ~~i~~i~~G~~~~~~l-~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg---  212 (282)
T 3qhy_B          141 SGVTALDGGVYTALAV-K-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTT---  212 (282)
T ss_dssp             SSEEEEEECSSEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTC---
T ss_pred             CCeEEEEcccCEEEEE-E-CCEEEEecCCCCCCCCCceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCC---
Confidence            2355554433222332 3 788888865432 211111112356666655332 3333  48999999654321110   


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .-......|..++... .  ..+.-. ||.|..|-
T Consensus       213 ~p~~~~~~v~~i~~G~-~--h~~al~-~g~v~~wG  243 (282)
T 3qhy_B          213 VPTEALSGVSAIASGE-W--YSLALK-NGKVIAWG  243 (282)
T ss_dssp             CCGGGGSSCCEEEECS-S--CEEEEE-TTEEEEES
T ss_pred             CCcccCCCceEEEcCC-C--EEEEEE-CCEEEEec
Confidence            0011223577777644 2  233333 88998883

>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A

Probab=94.00  E-value=3.1  Score=36.98  Aligned_cols=62  Identities=10%  Similarity=0.160  Sum_probs=36.4

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec------CCCCeEEEEEcCC---CCEEEEE
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG------HERGLETVTVSES---RQQFATG  222 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~---~~~l~sg  222 (391)
                      ...+.++|   .+++.++++-...+.|++++.  .......+..+..      .......|+|+|+   +..|...
T Consensus        27 ~~P~~~a~---~pdG~l~V~e~~gg~I~~~~~--~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~   97 (454)
T 1cru_A           27 NKPHALLW---GPDNQIWLTERATGKILRVNP--ESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS   97 (454)
T ss_dssp             SSEEEEEE---CTTSCEEEEETTTCEEEEECT--TTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred             CCceEEEE---cCCCcEEEEEcCCCEEEEEEC--CCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence            35678999   667887766544456877762  2233333333321      2456779999995   4444443

>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*

Probab=93.92  E-value=1.1  Score=42.52  Aligned_cols=111  Identities=12%  Similarity=0.078  Sum_probs=59.8

Q ss_pred             EEEe--cCCEEEEEECC------CeEEEEcCCCceEEeccCCCCC--eeEEEEEecCCCCeEEEEEeCCC--cEEEEeec
Q psy2107         121 AIDF--HNDWILTGCYD------HSVHIWTRRGEHKLNIPGHGGP--VKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWK  188 (391)
Q Consensus       121 ~~~~--~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~  188 (391)
                      ++.+  .+.+++.|+.+      ..+.+||.....-..+.....+  -.+++.   -.++.+++.|+.++  .+.+||  
T Consensus       445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~---~~~~~iyv~GG~~~~~~v~~yd--  519 (695)
T 2zwa_A          445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACS---LPDGNVLILGGVTEGPAMLLYN--  519 (695)
T ss_dssp             EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEE---CTTSCEEEECCBCSSCSEEEEE--
T ss_pred             EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEE---EcCCEEEEECCCCCCCCEEEEE--
Confidence            4455  66677777754      3578888855433333211111  112222   12567777777654  577777  


Q ss_pred             CCCCceeEEEE---EecCCCCeEEEEEcCC-CCEEEEEeC--C-----CcEEEEECCCC
Q psy2107         189 VESNSIECIHV---CRGHERGLETVTVSES-RQQFATGGW--D-----CLLKIWSADIS  236 (391)
Q Consensus       189 ~~~~~~~~~~~---~~~~~~~v~~l~~~~~-~~~l~sg~~--d-----g~i~iwd~~~~  236 (391)
                      ..+..+..+..   .........++.+..+ +++++.|+.  +     +.+.+||+.+.
T Consensus       520 ~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~  578 (695)
T 2zwa_A          520 VTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE  578 (695)
T ss_dssp             TTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred             CCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence            44555554432   1112222334555655 667777775  2     35788888763

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=93.76  E-value=2.8  Score=35.65  Aligned_cols=153  Identities=10%  Similarity=0.043  Sum_probs=83.9

Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee----ec
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT----LK  272 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  272 (391)
                      +..+...-.....|+|.|+|+++++--..|.|++++...++.                           ..+..    ..
T Consensus        24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~---------------------------~~v~~~~~v~~   76 (347)
T 3das_A           24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK---------------------------TELGEVPGVSP   76 (347)
T ss_dssp             EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE---------------------------EEEEECTTCCC
T ss_pred             eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE---------------------------eeecccCceee
Confidence            334444455678999999999766655589999887643221                           01111    11


Q ss_pred             CccCcccEEEeccC----CeEEEE---ECCCeEEEEecccC----------ceeE-EEE--CCeeeEEEEECCCCCEEEE
Q psy2107         273 GHKEAISAVQWTAV----DEIITS---SWDHTLKIWDAELG----------GMKS-EIV--GNKSFFDVHYSPLSKLVIT  332 (391)
Q Consensus       273 ~~~~~v~~~~~~~~----~~l~s~---~~dg~i~iwd~~~~----------~~~~-~~~--~~~~i~~~~~~p~~~~l~~  332 (391)
                      ........|+++|+    +.|+..   ..++.|.-|.+..+          +.+. .+.  ..+....++|.|+|.+.++
T Consensus        77 ~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt  156 (347)
T 3das_A           77 SGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAG  156 (347)
T ss_dssp             BTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEE
T ss_pred             cCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEE
Confidence            23455678999863    666554   23455666655431          1111 122  1224567999999987776


Q ss_pred             eeC-------------CCcEEEEcCCCCC---cc--eEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107         333 ASA-------------DKQIRLYDPKVKE---GA--IVKSTFSSHKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       333 g~~-------------dg~i~iwd~~~~~---~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s  378 (391)
                      .+.             .|.|.-++....-   .+  .....-.+|.. ...++|+| ++.++++
T Consensus       157 ~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp-~G~L~~~  218 (347)
T 3das_A          157 TGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRN-VQGLAWDD-KQRLFAS  218 (347)
T ss_dssp             CBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSB-CCEEEECT-TCCEEEE
T ss_pred             ECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCC-cceEEECC-CCCEEEE
Confidence            432             3555555543210   00  01112235654 56899999 4554443

>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1

Probab=92.04  E-value=5.9  Score=34.80  Aligned_cols=103  Identities=10%  Similarity=0.054  Sum_probs=65.3

Q ss_pred             CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC---CcEEEEeecCC-CCc----eeEEEEEec---C
Q psy2107         135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD---QTAMIWEWKVE-SNS----IECIHVCRG---H  203 (391)
Q Consensus       135 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d---g~v~iwd~~~~-~~~----~~~~~~~~~---~  203 (391)
                      .|.+.+|..+.+....+.+|.+....+...-+.....+++.+...   +.+.+-++... .+.    .+.+..+..   -
T Consensus       178 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~  257 (494)
T 1bpo_A          178 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ  257 (494)
T ss_dssp             EEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST
T ss_pred             cceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc
Confidence            478999999888888888987655554441111112344444443   78888886432 111    111111111   1


Q ss_pred             CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         204 ERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      .+--.++..++.-..+..-+.-|.|.+||++++.
T Consensus       258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt  291 (494)
T 1bpo_A          258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT  291 (494)
T ss_dssp             TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred             cCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence            3445678888888889999999999999998844

>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A

Probab=91.95  E-value=8.9  Score=36.65  Aligned_cols=256  Identities=11%  Similarity=0.041  Sum_probs=127.5

Q ss_pred             CcEEEEEec-CCEEEEEECCCeEEEEcCCCceEEeccC--C----CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         117 DWVSAIDFH-NDWILTGCYDHSVHIWTRRGEHKLNIPG--H----GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       117 ~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~--~----~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      ..|.++..+ ...|..|+.+| |..++........+..  .    ...|.++..   +.++..|..|+. +.+..++.  
T Consensus       146 ~~i~~i~~d~~g~lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~---d~~~~~lWigt~-~Gl~~~~~--  218 (758)
T 3ott_A          146 NTIYSIIRTKDNQIYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLE---DTTRQCVWIGTE-GYLFQYFP--  218 (758)
T ss_dssp             SCEEEEEECTTCCEEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEE---ETTTTEEEEEEE-EEEEEEET--
T ss_pred             CeEEEEEEcCCCCEEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEE---ECCCCEEEEEEC-CCCeEEcC--
Confidence            468888776 33444566554 6778875544433221  1    224777766   444554555553 45777773  


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCC----CCCC---Ccc-cccccccccc
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE----NGDE---GTT-SKKRKKEYSS  261 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~---~~~-~~~~~~~~~~  261 (391)
                      ..........+.  ...|.++....++.+ ..|+.+ -+.+++..+.....-...    ....   ... ...+....|.
T Consensus       219 ~~~~~~~~~~l~--~~~i~~i~~d~~g~l-WigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi  294 (758)
T 3ott_A          219 STGQIKQTEAFH--NNSIKSLALDGNGDL-LAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWL  294 (758)
T ss_dssp             TTTEEEEEEEEE--EEEEEEEEECTTCCE-EEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred             CCCeEEeccCCC--CCeEEEEEEcCCCCE-EEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence            333333222222  345888888888874 445544 577888765432110000    0000   000 0000000111


Q ss_pred             CCCC--------Cceeeec-------CccCcccEEEeccCCeEEEEECCCeEEEEecccCc--eeEEEEC--------Ce
Q psy2107         262 ASSR--------TPLITLK-------GHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG--MKSEIVG--------NK  316 (391)
Q Consensus       262 ~~~~--------~~~~~~~-------~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~--------~~  316 (391)
                      ....        .....+.       .....|.++.-..++.|..|+.+| +..++..++.  ....+..        ..
T Consensus       295 GT~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~  373 (758)
T 3ott_A          295 GTDYGISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHN  373 (758)
T ss_dssp             EESSSEEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCS
T ss_pred             EeCCcccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCC
Confidence            0000        0011110       012357777777778888888655 5566655432  1222221        23


Q ss_pred             eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc----ccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         317 SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS----HKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .|.++.-.++|++-+ |+ ++-+..||..+..-.... ....    ....|.++...+ ++. |-.|+..+-+.++|
T Consensus       374 ~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~-~g~-lWigT~~~Gl~~~~  445 (758)
T 3ott_A          374 RIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYN-IVDNTGTYNTNWTYYIFEDT-AGQ-LWISTCLGGIFVVD  445 (758)
T ss_dssp             CEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEE-EECCC--CBSSSEEEEEECT-TSE-EEEEESSSCEEEEE
T ss_pred             ceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEee-cCCCcCCCCCceEEEEEEcC-CCC-EEEEECCCceEEEc
Confidence            578888888777554 44 457899998764311111 0011    234588888776 443 44466555566665

>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}

Probab=91.64  E-value=0.78  Score=38.92  Aligned_cols=143  Identities=6%  Similarity=0.002  Sum_probs=77.6

Q ss_pred             CeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC-CCCeEEEEE--cC-CCCEEEEE-eCCCcEEEEECCCCCCCCCCCC
Q psy2107         170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH-ERGLETVTV--SE-SRQQFATG-GWDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       170 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~--~~-~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~  244 (391)
                      +..++.++.||.|.-.|..    +++.+..+... ..++....-  .+ ++..++.. +.||.|..++..++....    
T Consensus        10 ~~~V~v~t~dG~l~Ald~~----tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~----   81 (339)
T 2be1_A           10 SDILIAADVEGGLHAVDRR----NGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKL----   81 (339)
T ss_dssp             EEEEEEEETTSCEEEEETT----TTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEE----
T ss_pred             CCEEEEEeCCCeEEEEECC----CCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEe----
Confidence            3478889999999988833    44555665543 112221110  01 22333333 589999999986643210    


Q ss_pred             CCCCCccccccccccccCCCCCceeeecC--ccCcccE---E------EeccCCeEEEEECCCeEEEEecccCceeEEEE
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKG--HKEAISA---V------QWTAVDEIITSSWDHTLKIWDAELGGMKSEIV  313 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~---~------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  313 (391)
                                             ......  ...++..   .      ..+.++.+++|+.+|.+.-.|+++|+.+..+.
T Consensus        82 -----------------------~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~  138 (339)
T 2be1_A           82 -----------------------PLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG  138 (339)
T ss_dssp             -----------------------EEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred             -----------------------eeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence                                   000000  0111110   0      00245789999999999999999999999987


Q ss_pred             CCeee--------EEEEEC-----CCCCEEEEeeCCCcEEEEc
Q psy2107         314 GNKSF--------FDVHYS-----PLSKLVITASADKQIRLYD  343 (391)
Q Consensus       314 ~~~~i--------~~~~~~-----p~~~~l~~g~~dg~i~iwd  343 (391)
                      ...+.        .|....     ..+..|+.|..+..+.+.+
T Consensus       139 ~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~  181 (339)
T 2be1_A          139 PGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS  181 (339)
T ss_dssp             TTCBCC--------------------CCEEEEEEEEEECEECC
T ss_pred             cCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC
Confidence            55321        111110     1235677776666666655

>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}

Probab=90.35  E-value=7.7  Score=32.99  Aligned_cols=242  Identities=10%  Similarity=0.113  Sum_probs=115.9

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEE---ecc----CCCCCeeEEEEEecC-CCCeEEEEEe--CCCcEEEE
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL---NIP----GHGGPVKGVAWLYND-GKDAAFISVS--TDQTAMIW  185 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~---~~~----~~~~~v~~l~~~~~~-~~~~~l~s~~--~dg~v~iw  185 (391)
                      .-..|+|.  |+++++-...|.|++++..+....   .+.    ...+....|++.|.- .++.+.++-+  .++.|.-|
T Consensus        33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~  112 (347)
T 3das_A           33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM  112 (347)
T ss_dssp             SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred             CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence            45678886  556655555899999986432222   221    234567899994311 0243434322  34455555


Q ss_pred             eecCCC------CceeEE-EEEe-cCCCCeEEEEEcCCCCEEEEEeCC-------------CcEEEEECCCCCCCCCCCC
Q psy2107         186 EWKVES------NSIECI-HVCR-GHERGLETVTVSESRQQFATGGWD-------------CLLKIWSADISKERGDPSE  244 (391)
Q Consensus       186 d~~~~~------~~~~~~-~~~~-~~~~~v~~l~~~~~~~~l~sg~~d-------------g~i~iwd~~~~~~~~~~~~  244 (391)
                      .+....      ...+.+ ..+. .....-..|+|.|+|.+.++.+..             |.|.-.+.+..-.      
T Consensus       113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip------  186 (347)
T 3das_A          113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPA------  186 (347)
T ss_dssp             EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBC------
T ss_pred             EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCcc------
Confidence            443210      012222 2232 112234679999999877775532             2222222211000      


Q ss_pred             CCCCCccccccccccccCCCC-CceeeecCccCcccEEEeccCCeEEEEEC--CCeEEEEecccCc--------------
Q psy2107         245 NGDEGTTSKKRKKEYSSASSR-TPLITLKGHKEAISAVQWTAVDEIITSSW--DHTLKIWDAELGG--------------  307 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~--------------  307 (391)
                                      ..... .....-.+|.. ...++|++.+.|+++-.  |+.=.|--+..+.              
T Consensus       187 ----------------~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~  249 (347)
T 3das_A          187 ----------------PGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGS  249 (347)
T ss_dssp             ----------------TTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCT
T ss_pred             ----------------CCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCc
Confidence                            00000 01112224443 46788888777777643  3222222222211              


Q ss_pred             ----eeEEEECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc-ceEEEEeccccCcEEEEEECCCCCCEEEEeeC
Q psy2107         308 ----MKSEIVGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG-AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASF  381 (391)
Q Consensus       308 ----~~~~~~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~  381 (391)
                          ++..+..+ .....++|. +|.++...-..+.|....+..... ......+.+....+..|+..|++.-++++...
T Consensus       250 ~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~  328 (347)
T 3das_A          250 GFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNT  328 (347)
T ss_dssp             TCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTT
T ss_pred             cccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCC
Confidence                12223222 244566665 356666655566666666543211 01123344445689999999955444444434


Q ss_pred             CC
Q psy2107         382 DN  383 (391)
Q Consensus       382 dg  383 (391)
                      ||
T Consensus       329 ~g  330 (347)
T 3das_A          329 DG  330 (347)
T ss_dssp             SS
T ss_pred             CC
Confidence            43

>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}

Probab=89.22  E-value=8.6  Score=31.94  Aligned_cols=175  Identities=7%  Similarity=-0.094  Sum_probs=83.6

Q ss_pred             EecCCEEEEEE--CCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC------------cEEEEeec
Q psy2107         123 DFHNDWILTGC--YDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ------------TAMIWEWK  188 (391)
Q Consensus       123 ~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg------------~v~iwd~~  188 (391)
                      +++++.++-..  .++.|...+.++.....+....  +.  -+   ++++..|.-+....            .-.|+.+.
T Consensus        22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~--~~--~i---~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~   94 (302)
T 3s25_A           22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT--AM--YI---NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK   94 (302)
T ss_dssp             EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE--EE--EE---EECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred             EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc--ee--eE---EEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence            45667655554  3566777777665555544321  22  22   23566555554322            23344443


Q ss_pred             CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe--CCCcEEEE--ECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         189 VESNSIECIHVCRGHERGLETVTVSESRQQFATGG--WDCLLKIW--SADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      ........+..     ..  +..|+++++.|+-..  .++.-.||  +++..                            
T Consensus        95 ~dg~~~~~l~~-----~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs----------------------------  139 (302)
T 3s25_A           95 RNGHGSTVLDP-----DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGE----------------------------  139 (302)
T ss_dssp             TTSCCCEEEEC-----SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSC----------------------------
T ss_pred             CCCCcceEeec-----CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCC----------------------------
Confidence            44443333221     11  236777888887665  34444444  44321                            


Q ss_pred             CCceeeecCccCcccEEEeccCCeEEEEEC-CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC--CcEEE
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVDEIITSSW-DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD--KQIRL  341 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d--g~i~i  341 (391)
                        ....+..+..  ..+.|. ++.|+-.+. ...|...++..+.....+.....   ..+.|++.+|+-...+  ..|..
T Consensus       140 --~~~~lt~~~~--~~~~~~-g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~~~~---~~~~P~g~~iy~t~~~~~~~I~~  211 (302)
T 3s25_A          140 --EKKKIKNHYL--FTCNTS-DRYFYYNNPKNGQLYRYDTASQSEALFYDCNCY---KPVVLDDTNVYYMDVNRDNAIVH  211 (302)
T ss_dssp             --CCEEEESSCC--CCSEEE-TTEEEEECTTTCCEEEEETTTTEEEEEECSCEE---EEEEEETTEEEEEEGGGTTEEEE
T ss_pred             --CeEEEeCCCc--eEeeEE-CCEEEEEeCCCceEEEEECCCCCEEEEeCCCcc---ceeeecCCEEEEEEcCCCcEEEE
Confidence              1222222221  122222 334444433 56777777765544333332221   2345888877755433  35666


Q ss_pred             EcCCCC
Q psy2107         342 YDPKVK  347 (391)
Q Consensus       342 wd~~~~  347 (391)
                      -++...
T Consensus       212 ~~ldG~  217 (302)
T 3s25_A          212 VNINNP  217 (302)
T ss_dssp             ECSSSC
T ss_pred             EECCCC
Confidence            666543

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=86.87  E-value=14  Score=33.58  Aligned_cols=112  Identities=13%  Similarity=0.059  Sum_probs=67.4

Q ss_pred             CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec
Q psy2107         206 GLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT  284 (391)
Q Consensus       206 ~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~  284 (391)
                      ....+.++|+|++++.++ .+.++.++|++.-.....-.                 .......+..-..-.-.....+|.
T Consensus       324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k-----------------~~~~~~~~~ae~e~GlGPlHt~Fd  386 (638)
T 3sbq_A          324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK-----------------LADPRDVIVGEPELGLGPLHTTFD  386 (638)
T ss_dssp             SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC-----------------CSCGGGGEEECCBCCSCEEEEEEC
T ss_pred             CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc-----------------ccCcccceEeeccCCCcccEEEEC
Confidence            456788899999987765 57899999987421100000                 000011111111122334567888


Q ss_pred             cCCeEEEEE-CCCeEEEEecccC----------ceeEEEECCeeeEEEEE------CCCCCEEEEee
Q psy2107         285 AVDEIITSS-WDHTLKIWDAELG----------GMKSEIVGNKSFFDVHY------SPLSKLVITAS  334 (391)
Q Consensus       285 ~~~~l~s~~-~dg~i~iwd~~~~----------~~~~~~~~~~~i~~~~~------~p~~~~l~~g~  334 (391)
                      +.+..++.. -|..|.-|++...          ..+..+..+..+-.+.-      .|+|++|++..
T Consensus       387 ~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln  453 (638)
T 3sbq_A          387 GRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS  453 (638)
T ss_dssp             SSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred             CCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence            777766654 7999999999754          45666666655544443      57888888874

>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A

Probab=86.34  E-value=33  Score=35.43  Aligned_cols=199  Identities=12%  Similarity=0.086  Sum_probs=99.4

Q ss_pred             CcEEEEEec-CCEEEEEECCCeEEEEcCCC--ceEEeccCC----CCCeeEEEEEecCCCCeEEEEEe-------CCCcE
Q psy2107         117 DWVSAIDFH-NDWILTGCYDHSVHIWTRRG--EHKLNIPGH----GGPVKGVAWLYNDGKDAAFISVS-------TDQTA  182 (391)
Q Consensus       117 ~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~~~~l~s~~-------~dg~v  182 (391)
                      ..|.--.|- .+.|+-.+ +..|.-|++.+  .....+..|    ...|..-..   +++.+.++..|       -.|.+
T Consensus       106 e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~---d~~~kW~~l~gi~~~~~~v~G~m  181 (1630)
T 1xi4_A          106 DDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRT---DAKQKWLLLTGISAQQNRVVGAM  181 (1630)
T ss_pred             CCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeee---CCCCCeEEEEeeccCCCccccee
Confidence            455555664 55554444 35799999853  333333333    233433333   55666554332       35788


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcC--C-CCEEEEEeC---CCcEEEEECCCCCCCCCCCCCCCCCccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSE--S-RQQFATGGW---DCLLKIWSADISKERGDPSENGDEGTTSKKRK  256 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~-~~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~  256 (391)
                      .+|..+  .   ...+.+.||......+....  . ...+..+..   .+.++|-++........        ...    
T Consensus       182 QLyS~e--r---~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~--------~f~----  244 (1630)
T 1xi4_A          182 QLYSVD--R---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQ--------PFP----  244 (1630)
T ss_pred             eeeecc--c---ccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCC--------CCc----
Confidence            888743  1   22344556665554444422  1 122322222   26888888854311000        000    


Q ss_pred             cccccCCCCCceee-ec--CccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEE
Q psy2107         257 KEYSSASSRTPLIT-LK--GHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVI  331 (391)
Q Consensus       257 ~~~~~~~~~~~~~~-~~--~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~  331 (391)
                              .+.+.. +.  ....-..++..+ ..+.++..+.-|.+.+||+.++.++..-+-.. +|...+......-++
T Consensus       245 --------kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~  316 (1630)
T 1xi4_A          245 --------KKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGII  316 (1630)
T ss_pred             --------cccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceE
Confidence                    000100 11  112223345555 55778888999999999999999876655333 444444333322233


Q ss_pred             EeeCCCcEEEEcC
Q psy2107         332 TASADKQIRLYDP  344 (391)
Q Consensus       332 ~g~~dg~i~iwd~  344 (391)
                      +....|.|.-..+
T Consensus       317 ~vnr~G~vl~v~v  329 (1630)
T 1xi4_A          317 GVNRKGQVLSVCV  329 (1630)
T ss_pred             EEcCCceEEEEEE
Confidence            3334555544433

>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}

Probab=86.29  E-value=15  Score=31.60  Aligned_cols=111  Identities=9%  Similarity=-0.076  Sum_probs=53.8

Q ss_pred             CcEEEEEec---CCEEEEEECCC----eEEEEcCCCceEEecc------C--------CCCCeeEEEEEecCCCCeEEEE
Q psy2107         117 DWVSAIDFH---NDWILTGCYDH----SVHIWTRRGEHKLNIP------G--------HGGPVKGVAWLYNDGKDAAFIS  175 (391)
Q Consensus       117 ~~V~~~~~~---~~~l~t~~~dg----~i~iwd~~~~~~~~~~------~--------~~~~v~~l~~~~~~~~~~~l~s  175 (391)
                      ..|.+|+++   ++.+..++..|    .|...+-.+..-..+.      .        ....|.++++.|.+. ...+.+
T Consensus        55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~-~~~l~~  133 (394)
T 3b7f_A           55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASE-PGTWYA  133 (394)
T ss_dssp             SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTS-TTCEEE
T ss_pred             CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCC-CCEEEE
Confidence            468999997   34555665555    4544432222211111      1        112477788843210 334555


Q ss_pred             EeCCCcEEEEeecCCCCceeEEEEEe----------------cCCCCeEEEEEcCC-CCEEEEEeCCCcEEE
Q psy2107         176 VSTDQTAMIWEWKVESNSIECIHVCR----------------GHERGLETVTVSES-RQQFATGGWDCLLKI  230 (391)
Q Consensus       176 ~~~dg~v~iwd~~~~~~~~~~~~~~~----------------~~~~~v~~l~~~~~-~~~l~sg~~dg~i~i  230 (391)
                      +...+.|...+  .....++.+....                .....+.+|.++|. ...|+.+..++.|..
T Consensus       134 g~~~ggl~~S~--DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~  203 (394)
T 3b7f_A          134 GTSPQGLFRST--DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFE  203 (394)
T ss_dssp             EEETTEEEEES--STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEE
T ss_pred             EecCCcEEEEc--CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEE
Confidence            55566555443  3333444332111                01235789999883 344555554444433

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=85.09  E-value=18  Score=35.75  Aligned_cols=32  Identities=9%  Similarity=0.280  Sum_probs=27.4

Q ss_pred             eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         317 SFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       317 ~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      .+.+++..++..++++-+.|+++|+|++.++.
T Consensus       237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~  268 (950)
T 4gq2_M          237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQ  268 (950)
T ss_dssp             CEEEEEEETTTTEEEEEETTCEEEEEETTTTE
T ss_pred             eEEEEeecCCCcEEEEEECCCEEEEEECCCCC
Confidence            46677778888899999999999999998765

>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A

Probab=83.57  E-value=5.7  Score=36.10  Aligned_cols=92  Identities=10%  Similarity=0.059  Sum_probs=61.7

Q ss_pred             eEEEEeccc----C-ceeEEEECCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCC----------cceEEEEecccc
Q psy2107         297 TLKIWDAEL----G-GMKSEIVGNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKE----------GAIVKSTFSSHK  360 (391)
Q Consensus       297 ~i~iwd~~~----~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~----------~~~~~~~~~~h~  360 (391)
                      .+.+.|.+.    + .....+........+..+|||+++++++ .+.++.++|++...          ...+..... -.
T Consensus       299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~G  377 (638)
T 3sbq_A          299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LG  377 (638)
T ss_dssp             CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CC
T ss_pred             CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CC
Confidence            356666654    2 3444555556677889999999887654 57899999986311          111222332 23


Q ss_pred             CcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         361 EWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       361 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      -.....+|.+ +++...|.--|..|.-|++
T Consensus       378 lGPlHt~Fd~-~G~aYTtlfidSqvvkWni  406 (638)
T 3sbq_A          378 LGPLHTTFDG-RGNAYTTLFIDSQVVKWNM  406 (638)
T ss_dssp             SCEEEEEECS-SSEEEEEETTTTEEEEEEH
T ss_pred             CcccEEEECC-CCceEeeeeecceEEEEec
Confidence            4578899999 5566677778999999986

>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B

Probab=82.03  E-value=41  Score=33.21  Aligned_cols=36  Identities=19%  Similarity=0.218  Sum_probs=28.7

Q ss_pred             ccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEE
Q psy2107         278 ISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIV  313 (391)
Q Consensus       278 v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~  313 (391)
                      +.+++.. ....+++-+.|+++|+|++.+++++.+..
T Consensus       238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d  274 (950)
T 4gq2_M          238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE  274 (950)
T ss_dssp             EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred             EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence            4455555 44578899999999999999999988764

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=81.65  E-value=28  Score=30.94  Aligned_cols=104  Identities=13%  Similarity=0.134  Sum_probs=0.0

Q ss_pred             cEEEeccCCe--EEEEECCCeEEEEecccCc---eeEEEEC----------CeeeEEEEECCC----CCEEEEeeCCC--
Q psy2107         279 SAVQWTAVDE--IITSSWDHTLKIWDAELGG---MKSEIVG----------NKSFFDVHYSPL----SKLVITASADK--  337 (391)
Q Consensus       279 ~~~~~~~~~~--l~s~~~dg~i~iwd~~~~~---~~~~~~~----------~~~i~~~~~~p~----~~~l~~g~~dg--  337 (391)
                      +.|+|.|++.  ++++...|.|++++.....   .+..+..          ......++++|+    +.+.++-+.+.  
T Consensus        17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~   96 (463)
T 2wg3_C           17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQER   96 (463)
T ss_dssp             EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCS
T ss_pred             eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCC


Q ss_pred             ----------cEEEEcCCC-------CCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         338 ----------QIRLYDPKV-------KEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       338 ----------~i~iwd~~~-------~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                                .|.-|.+..       ......+..+.  .....-..|+|.| +++++++.++.+
T Consensus        97 ~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~  160 (463)
T 2wg3_C           97 WAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGM  160 (463)
T ss_dssp             SCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTT
T ss_pred             cccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCC

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	391
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	4e-24
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	2e-14
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	8e-13
d1vyhc1	317	b.69.4.1 (C:92-408) Platelet-activating factor ace	7e-09
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-21
d1tbga_	340	b.69.4.1 (A:) beta1-subunit of the signal-transduc	1e-05
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	3e-19
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	4e-09
d1p22a2	293	b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be	0.003
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	8e-18
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	2e-11
d1erja_	388	b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea	3e-06
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-17
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	5e-11
d2ovrb2	342	b.69.4.1 (B:2365-2706) F-box/WD repeat-containing	3e-05
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	8e-17
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	2e-10
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	9e-07
d1gxra_	337	b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum	0.003
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	9e-14
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	3e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	5e-05
d1nr0a2	299	b.69.4.1 (A:313-611) Actin interacting protein 1 {	1e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	1e-12
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	7e-07
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	2e-04
d1pgua2	287	b.69.4.1 (A:327-613) Actin interacting protein 1 {	9e-04
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	1e-11
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-09
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	6e-06
d1k8kc_	371	b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1	4e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-11
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	1e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	7e-05
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	9e-04
d1yfqa_	342	b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake	0.001
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	8e-11
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-07
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	1e-04
d1sq9a_	393	b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake	2e-04
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	3e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	5e-10
d1nexb2	355	b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker'	0.002
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	1e-09
d1pgua1	325	b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba	7e-04
d1qksa2	432	b.70.2.1 (A:136-567) C-terminal (heme d1) domain o	5e-09
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-08
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	3e-06
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	5e-05
d1jmxb_	346	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	9e-04
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	2e-08
d1nr0a1	311	b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne	8e-04
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	6e-08
d1k32a3	360	b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar	3e-04
d1hzua2	426	b.70.2.1 (A:118-543) C-terminal (heme d1) domain o	5e-07
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	1e-04
d1pbyb_	337	b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase	4e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	8e-04
d2bbkh_	355	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1ri6a_	333	b.69.11.1 (A:) Putative isomerase YbhE {Escherichi	0.001
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.001
d1l0qa2	301	b.69.2.3 (A:1-301) Surface layer protein {Archaeon	0.004
d1mdah_	368	b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {	0.002

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.0 bits (245), Expect = 4e-24
 Identities = 53/318 (16%), Positives = 116/318 (36%), Gaps = 59/318 (18%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVA--------- 162
           H   V+ + FH     +++   D ++ +W    G+ +  + GH   V+ ++         
Sbjct: 16  HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75

Query: 163 ------------------------------WLYNDGKDAAFISVSTDQTAMIWEWKVESN 192
                                          +         +S S D+T  +WE      
Sbjct: 76  SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV----Q 131

Query: 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252
           +  C+    GH   +  V  ++     A+   D  +++W     + + +  E+       
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 191

Query: 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI 312
               +   S+ S            + +         +++ S D T+K+WD   G     +
Sbjct: 192 SWAPESSYSSIS--------EATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 243

Query: 313 VGNKSF-FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
           VG+ ++   V +    K +++ + DK +R++D   K    +K T ++H+ +V S+ +   
Sbjct: 244 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWD--YKNKRCMK-TLNAHEHFVTSLDFHK- 299

Query: 372 DPQLFVSASFDNSVKLWD 389
                V+ S D +VK+W+
Sbjct: 300 TAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.7 bits (174), Expect = 2e-14
 Identities = 39/236 (16%), Positives = 88/236 (37%), Gaps = 17/236 (7%)

Query: 110 LDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGK 169
           +    H+    +I  + D I++   D ++ +W  +  + +           +     DG 
Sbjct: 97  MHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT 156

Query: 170 DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLK 229
                S S DQT  +W       + EC    R H   +E ++ +      +         
Sbjct: 157 --LIASCSNDQTVRVWVV----ATKECKAELREHRHVVECISWAPESSYSSISEATGSET 210

Query: 230 IWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE- 288
             S                 + S+ +  +    S+   L+TL GH   +  V + +  + 
Sbjct: 211 KKSGKPGPFLL---------SGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKF 261

Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSF-FDVHYSPLSKLVITASADKQIRLYD 343
           I++ + D TL++WD +       +  ++ F   + +   +  V+T S D+ +++++
Sbjct: 262 ILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.3 bits (160), Expect = 8e-13
 Identities = 32/231 (13%), Positives = 74/231 (32%), Gaps = 52/231 (22%)

Query: 91  SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG-EHKL 149
           S +  I +  +++               +   +     I +   D +V +W     E K 
Sbjct: 120 SRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 179

Query: 150 NIPGHGGPVKGVAWLYNDGKDAA-----------------FISVSTDQTAMIWEWKVESN 192
            +  H   V+ ++W       +                   +S S D+T  +W+     +
Sbjct: 180 ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV----S 235

Query: 193 SIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTS 252
           +  C+    GH+  +  V      +   +   D  L++W                     
Sbjct: 236 TGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK------------------ 277

Query: 253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWD 302
                      ++  + TL  H+  ++++ +      ++T S D T+K+W+
Sbjct: 278 -----------NKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.4 bits (129), Expect = 7e-09
 Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 35/197 (17%)

Query: 197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRK 256
            +   GH   +  V          +   D  +K+W  +                      
Sbjct: 10  KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE---------------------- 47

Query: 257 KEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIV--G 314
                  +     TLKGH +++  + +    +++ S             G      +   
Sbjct: 48  -------TGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 100

Query: 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ 374
           + +   V   P    +++AS DK I++++ +         TF+ H+EWV+ VR +  D  
Sbjct: 101 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGY---CVKTFTGHREWVRMVRPNQ-DGT 156

Query: 375 LFVSASFDNSVKLWDLR 391
           L  S S D +V++W + 
Sbjct: 157 LIASCSNDQTVRVWVVA 173

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 92.9 bits (229), Expect = 1e-21
 Identities = 34/291 (11%), Positives = 85/291 (29%), Gaps = 20/291 (6%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYN----- 166
           H   + A+ +  D   +++   D  + IW +        IP     V   A+  +     
Sbjct: 54  HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVA 113

Query: 167 ---DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
                   +  ++ T +  +    ++  ++          +  + T +   +   +    
Sbjct: 114 CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET 173

Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-SASSRTPLITLKGHKEAISAVQ 282
                              + +     +                   T  GH+  I+A+ 
Sbjct: 174 GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC 233

Query: 283 WTAV-DEIITSSWDHTLKI---WDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQ 338
           +    +   T S D T ++      +     S          V +S   +L++    D  
Sbjct: 234 FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293

Query: 339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
             ++D    +        + H   V  +  +  D     + S+D+ +K+W+
Sbjct: 294 CNVWDALKAD---RAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 44.7 bits (104), Expect = 1e-05
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 22/220 (10%)

Query: 187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA------------- 233
             V    +      RGH   +  +      +   +   D  L IW +             
Sbjct: 38  DPVGRIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRS 97

Query: 234 ----DISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEI 289
                 +                       +   +      L GH   +S  ++   ++I
Sbjct: 98  SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQI 157

Query: 290 ITSSWDHTLKIWDAELGG-MKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           +TSS D T  +WD E G    +          +  +P ++L ++ + D   +L+D +   
Sbjct: 158 VTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM 217

Query: 349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
               + TF+ H+  + ++ + P +   F + S D + +L+
Sbjct: 218 ---CRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLF 253

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.9 bits (208), Expect = 3e-19
 Identities = 53/287 (18%), Positives = 112/287 (39%), Gaps = 19/287 (6%)

Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF 173
               V  + + +  I++G  D+++ IW     E K  + GH G V  +   Y++      
Sbjct: 14  TSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQYDERVIITG 71

Query: 174 ISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSA 233
            S ST +   +   ++ +  I               +      +  A         I   
Sbjct: 72  SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131

Query: 234 DI-----SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
            +     +       ++    + S  R  +  + S+   + TL GHK  I+ +Q+     
Sbjct: 132 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD-RL 190

Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD----- 343
           +++ S D+T+++WD E G     + G++           ++V + + D +I+++D     
Sbjct: 191 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIV-SGAYDGKIKVWDLVAAL 249

Query: 344 -PKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
            P+   G +   T   H   V  +++   D    VS+S D+++ +WD
Sbjct: 250 DPRAPAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWD 293

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (131), Expect = 4e-09
 Identities = 57/260 (21%), Positives = 95/260 (36%), Gaps = 27/260 (10%)

Query: 145 GEHKLN-IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH 203
           G H L  I       KGV  L  D +    +S   D T  IW+     N++EC  +  GH
Sbjct: 1   GRHSLQRIHCRSETSKGVYCLQYDDQ--KIVSGLRDNTIKIWDK----NTLECKRILTGH 54

Query: 204 ERGLETVTVSESRQ------------QFATGGWDCLLKIWSADISKERGDPSENGDEGTT 251
              +  +   E                  TG     L      +   R +          
Sbjct: 55  TGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKD 114

Query: 252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSE 311
                 + +S +  T    L GH+ A++ V +     I+++S D T+K+W+         
Sbjct: 115 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWNTSTCEFVRT 173

Query: 312 IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
           + G+K           +LV++ S+D  IRL+D +              +   + VR    
Sbjct: 174 LNGHKRGIA-CLQYRDRLVVSGSSDNTIRLWDIECGA------CLRVLEGHEELVRCIRF 226

Query: 372 DPQLFVSASFDNSVKLWDLR 391
           D +  VS ++D  +K+WDL 
Sbjct: 227 DNKRIVSGAYDGKIKVWDLV 246

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 4/51 (7%)

Query: 95  VIDVEYLESTPTPSPLDCIL----HDDWVSAIDFHNDWILTGCYDHSVHIW 141
           V D+        P+   C+     H   V  + F    I++  +D ++ IW
Sbjct: 242 VWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIW 292

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.2 bits (201), Expect = 8e-18
 Identities = 46/330 (13%), Positives = 102/330 (30%), Gaps = 57/330 (17%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-------------------TRRGEHKLNIPG 153
           H   V  + F ND  ++ TGC + +  ++                        +  + P 
Sbjct: 61  HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPS 119

Query: 154 HGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS 213
               ++ V +  +    A        +   I   K+              +       + 
Sbjct: 120 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLV 179

Query: 214 ESRQQFATGGWDCLLKIWSADISKERGDP-------------SENGDEGTTSKKRKKEYS 260
                     WD      S  +S E G               + + D        +  + 
Sbjct: 180 SGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 239

Query: 261 SASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSF- 318
                +   +  GHK+++ +V +T   + +++ S D ++K+W+ +    KS+     S  
Sbjct: 240 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 299

Query: 319 ------------FDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV 366
                         V  +   + +++ S D+ +  +D   K G  +      H+  V SV
Sbjct: 300 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWD--KKSGNPLL-MLQGHRNSVISV 356

Query: 367 RWSPI-----DPQLFVSASFDNSVKLWDLR 391
             +       +  +F + S D   ++W  +
Sbjct: 357 AVANGSSLGPEYNVFATGSGDCKARIWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.5 bits (150), Expect = 2e-11
 Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 28/245 (11%)

Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
              H+  + ++D+               +                         + G   
Sbjct: 159 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGK 218

Query: 172 AFISVSTDQTAMIWEW---KVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLL 228
              + S D+   +W+     +            GH+  + +V  +   Q   +G  D  +
Sbjct: 219 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 278

Query: 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
           K+W+                   +   K +  + +S T  +T  GHK+ + +V  T  DE
Sbjct: 279 KLWNLQ-----------------NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE 321

Query: 289 -IITSSWDHTLKIWD-------AELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIR 340
            I++ S D  +  WD         L G ++ ++           P   +  T S D + R
Sbjct: 322 YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKAR 381

Query: 341 LYDPK 345
           ++  K
Sbjct: 382 IWKYK 386

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 49/258 (18%), Positives = 86/258 (33%), Gaps = 39/258 (15%)

Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
              +   T+   +++   +       +H    H   +  V  S   +  ATG  +   ++
Sbjct: 29  PDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQV 87

Query: 231 WSADISKERG---DPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-- 285
           +            D S    +           S    R+   +  G   A  A       
Sbjct: 88  YRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRI 147

Query: 286 ---------------------------VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF 318
                                       D++++ S D T++IWD   G     +      
Sbjct: 148 WDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGV 207

Query: 319 FDVHYSP-LSKLVITASADKQIRLYDPK----VKEGAIVKSTFSSHKEWVQSVRWSPIDP 373
             V  SP   K +   S D+ +R++D +    V+       + + HK+ V SV ++  D 
Sbjct: 208 TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DG 266

Query: 374 QLFVSASFDNSVKLWDLR 391
           Q  VS S D SVKLW+L+
Sbjct: 267 QSVVSGSLDRSVKLWNLQ 284

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (195), Expect = 3e-17
 Identities = 48/290 (16%), Positives = 109/290 (37%), Gaps = 29/290 (10%)

Query: 115 HDDWV-SAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
           HDD V + + F  + I++G  D+++ +W    G+    + GH G V              
Sbjct: 15  HDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQM--------- 65

Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
               +   +          N+     +   +        +    ++  +G  D  L++W 
Sbjct: 66  --RDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123

Query: 233 ADISKERGDPSENGDEGTTSKKRKKEY-----------SSASSRTPLITLKGHKEAISAV 281
            +  +       +       +   +                 + T L TL+GH   + ++
Sbjct: 124 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 183

Query: 282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
           Q+     +++ S D ++++WD E G     + G++S           ++++ +AD  +++
Sbjct: 184 QFDG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT-SGMELKDNILVSGNADSTVKI 241

Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           +D K  +        + H+  V        +    +++S D +VKLWDL+
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVT---CLQFNKNFVITSSDDGTVKLWDLK 288

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (147), Expect = 5e-11
 Identities = 49/288 (17%), Positives = 97/288 (33%), Gaps = 51/288 (17%)

Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKD 170
              H   V  +  H   +++G  D ++ +W    G+    + GH   V+ V +       
Sbjct: 93  LYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR--- 149

Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
              +S + D    +W+      +  C+H  +GH       ++        +G  D  +++
Sbjct: 150 --VVSGAYDFMVKVWDP----ETETCLHTLQGHTN--RVYSLQFDGIHVVSGSLDTSIRV 201

Query: 231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEII 290
           W  +                                 + TL GH+   S ++    + ++
Sbjct: 202 WDVETGN-----------------------------CIHTLTGHQSLTSGMELKD-NILV 231

Query: 291 TSSWDHTLKIWDAELGGMKSEIVGNK--SFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
           + + D T+KIWD + G     + G                 VIT+S D  ++L+D K  E
Sbjct: 232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 291

Query: 349 --GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS----VKLWDL 390
               +V          V  +R S     +    S + +    + + D 
Sbjct: 292 FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDF 338

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 9/130 (6%)

Query: 261 SASSRTPLITLKGHKEAI-SAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF 319
                     LKGH + + + +Q+   + I++ S D+TLK+W A  G     +VG     
Sbjct: 2   RRGELKSPKVLKGHDDHVITCLQFCG-NRIVSGSDDNTLKVWSAVTGKCLRTLVG----- 55

Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
             H   +    +  +               A       +      +VR   +  +  VS 
Sbjct: 56  --HTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSG 113

Query: 380 SFDNSVKLWD 389
           S D ++++WD
Sbjct: 114 SRDATLRVWD 123

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.7 bits (192), Expect = 8e-17
 Identities = 29/293 (9%), Positives = 72/293 (24%), Gaps = 24/293 (8%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW------TRRGEHKLNIPGHGGPVKGVAWLYN 166
           H + V A+   N    + TG     V +W       +    +L+       ++    L  
Sbjct: 50  HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL-P 107

Query: 167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC 226
           DG        ++  +             E             +          + G    
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167

Query: 227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV 286
                   + + +G          ++   K       +      L+  ++       + +
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227

Query: 287 DEIITSSWDHTLKIWDAELGGMKSEIVG---------NKSFFDVHYSPLSKLVITASADK 337
             +        L +           +                 + ++   K  ++   D 
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287

Query: 338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
            +  +      GA +  +       V S   S  D +  V+ S D    ++++
Sbjct: 288 LLNAWR--TPYGASIFQS--KESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 2e-10
 Identities = 28/259 (10%), Positives = 74/259 (28%), Gaps = 10/259 (3%)

Query: 95  VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---------WILTGCYDHSVHIWTRRG 145
           V D+ +  +    S LDC+  D+++ +     D               +D +      + 
Sbjct: 76  VWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKA 135

Query: 146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER 205
           E   + P                  +       D        + + ++     +   ++ 
Sbjct: 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195

Query: 206 GLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR 265
                   ++  +         L+                G+      +         ++
Sbjct: 196 TKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK 255

Query: 266 TPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324
                L  H+  + ++++    +  +++  D+ L  W    G    +   + S      S
Sbjct: 256 PDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDIS 315

Query: 325 PLSKLVITASADKQIRLYD 343
              K ++T S DK+  +Y+
Sbjct: 316 VDDKYIVTGSGDKKATVYE 334

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (112), Expect = 9e-07
 Identities = 37/274 (13%), Positives = 70/274 (25%), Gaps = 26/274 (9%)

Query: 135 DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESN-S 193
           D  +     R   ++N   HG  V  V    N  +    +         +W+     N S
Sbjct: 31  DALIGPGIPRHARQINTLNHGEVVCAVTI-SNPTR---HVYTGGKGCVKVWDISHPGNKS 86

Query: 194 IECIHVCRGHERGLETVTVSESRQQFATGG----------------WDCLLKIWSADISK 237
                 C   +  + +  +         GG                    L   +     
Sbjct: 87  PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYA 146

Query: 238 ERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHT 297
               P         S      +   +             A          ++ T   D+T
Sbjct: 147 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNT 206

Query: 298 LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFS 357
           ++ WD   G    +       F + Y P  + +        + +      +    K    
Sbjct: 207 VRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD----KYQLH 262

Query: 358 SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
            H+  V S++++    + FVS   DN +  W   
Sbjct: 263 LHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP 295

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.003
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 312 IVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
            +G+K  +  H +   ++           L  P +   A   +T + H E V +V  S  
Sbjct: 6   AMGSKPAYSFHVTADGQMQPVPFPPDA--LIGPGIPRHARQINTLN-HGEVVCAVTISN- 61

Query: 372 DPQLFVSASFDNSVKLWDLR 391
             +   +      VK+WD+ 
Sbjct: 62  PTRHVYTGG-KGCVKVWDIS 80

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 69.2 bits (167), Expect = 9e-14
 Identities = 34/289 (11%), Positives = 75/289 (25%), Gaps = 15/289 (5%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIW-TRRGEHKLNIP-GHGGPVKGVAWLYND--- 167
           H+  ++A+    D   + +   +  ++ W    G      P  H   + G+         
Sbjct: 11  HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70

Query: 168 ----GKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
                     +               + +S                              
Sbjct: 71  TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKL 130

Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW 283
            +  +   S+ ++              +     K   ++ S    I       +++    
Sbjct: 131 TEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNN 190

Query: 284 TAVDEIITSSWDHTLKIW--DAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
            A       S          + EL    S          V +SP +  + T S D  + +
Sbjct: 191 GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIV 250

Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           ++        +    +     V SV W   +    VSA  D+++K W++
Sbjct: 251 WNMNKPSDHPIIIKGAHAMSSVNSVIWL--NETTIVSAGQDSNIKFWNV 297

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 43.1 bits (99), Expect = 3e-05
 Identities = 22/191 (11%), Positives = 50/191 (26%), Gaps = 26/191 (13%)

Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
            +      S +   ND            +   +                         + 
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191

Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIW 231
           AF+  +     +I      +  +   +    H   +  V+ S    + ATG  D  + +W
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251

Query: 232 SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIIT 291
           + +                            S    +I       ++++V W     I++
Sbjct: 252 NMN--------------------------KPSDHPIIIKGAHAMSSVNSVIWLNETTIVS 285

Query: 292 SSWDHTLKIWD 302
           +  D  +K W+
Sbjct: 286 AGQDSNIKFWN 296

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 42.7 bits (98), Expect = 5e-05
 Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 352 VKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           +      H + + ++  S  D +   SA  +  +  WD+ 
Sbjct: 4   IDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIS 42

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.1 bits (94), Expect = 1e-04
 Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 28/131 (21%)

Query: 195 ECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254
               V  GH + +  ++ S   +   +   +  +  W                       
Sbjct: 3   SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS-------------------- 42

Query: 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314
                   +  +  +    H   I+ ++ T+  ++ T SWD  LK+  A   G+ S    
Sbjct: 43  --------TGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAV 94

Query: 315 NKSFFDVHYSP 325
                      
Sbjct: 95  ANKLSSQPLGL 105

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.4 bits (157), Expect = 1e-12
 Identities = 38/288 (13%), Positives = 82/288 (28%), Gaps = 27/288 (9%)

Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFI 174
           H+  ++A+  +   +++G YD  +  W+    H+     H   +  +       K   + 
Sbjct: 12  HNKGITALTVNP--LISGSYDGRIMEWSSSSMHQ----DHSNLIVSLDN----SKAQEYS 61

Query: 175 SVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSAD 234
           S+S D T  +          +       ++     +T  +      +   D +  +    
Sbjct: 62  SISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNS 121

Query: 235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA--------- 285
                         G       + +  +            +   S +  +          
Sbjct: 122 PGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 181

Query: 286 ----VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
               +      S +     W      + +                  LV T S D  I +
Sbjct: 182 VMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 241

Query: 342 YDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
           Y   VK    +    ++HK+ V ++ W    P   VS+  D  +K W+
Sbjct: 242 YS--VKRPMKIIKALNAHKDGVNNLLWET--PSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 48.0 bits (112), Expect = 7e-07
 Identities = 20/200 (10%), Positives = 56/200 (28%), Gaps = 35/200 (17%)

Query: 110 LDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIP---GHGGPVKGVAWLYN 166
           +  +  +   SA+    +++  G  + +     +  + +++             ++   +
Sbjct: 114 IKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPS 173

Query: 167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHER----GLETVTVSESRQQFATG 222
           +   AA   +       +   +V+++                               ATG
Sbjct: 174 ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATG 233

Query: 223 GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ 282
             D  + I+S                                   +  L  HK+ ++ + 
Sbjct: 234 SLDTNIFIYSVK----------------------------RPMKIIKALNAHKDGVNNLL 265

Query: 283 WTAVDEIITSSWDHTLKIWD 302
           W     +++S  D  +K W+
Sbjct: 266 WETPSTLVSSGADACIKRWN 285

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (92), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELG 306
            L T+ GH + I+A+     + +I+ S+D  +  W +   
Sbjct: 5   VLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSSM 41

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.4 bits (87), Expect = 9e-04
 Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 5/37 (13%)

Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
           T S H + + ++  +P+     +S S+D  +  W   
Sbjct: 8   TISGHNKGITALTVNPL-----ISGSYDGRIMEWSSS 39

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.0 bits (151), Expect = 1e-11
 Identities = 43/314 (13%), Positives = 89/314 (28%), Gaps = 41/314 (13%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
           H+  V+ +D+  D   I+T   D + ++WT +G             +    +     +  
Sbjct: 50  HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKK 109

Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
           F   S  +   I  ++ E++   C H+ +     + ++    +    A G  D   +I+S
Sbjct: 110 FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFS 169

Query: 233 ADISKERGDPSENGDEGTT-------------------SKKRKKEYSSASSRTPLITL-- 271
           A I +    P+                                    +  S    + L  
Sbjct: 170 AYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLAD 229

Query: 272 ----------KGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD- 320
                           + AV +     ++ +  D    ++  +    K    G       
Sbjct: 230 ADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQ 289

Query: 321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP---IDPQLFV 377
                L+      + DK+            +     S HK  V  +            F 
Sbjct: 290 SSQRGLTARERFQNLDKKASSEGSAAAGAGL----DSLHKNSVSQISVLSGGKAKCSQFC 345

Query: 378 SASFDNSVKLWDLR 391
           +   D  + +WD+R
Sbjct: 346 TTGMDGGMSIWDVR 359

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.9 bits (130), Expect = 6e-09
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 320 DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA 379
              ++     +     + ++ +Y+    +  +       H   V  V W+P D    V+ 
Sbjct: 12  CHAWNKDRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEHNGQVTGVDWAP-DSNRIVTC 69

Query: 380 SFDNSVKLWD 389
             D +  +W 
Sbjct: 70  GTDRNAYVWT 79

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.6 bits (106), Expect = 6e-06
 Identities = 26/196 (13%), Positives = 55/196 (28%), Gaps = 34/196 (17%)

Query: 203 HERGLETVT---VSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEY 259
           H   +E ++    ++ R Q A    +  + I+                            
Sbjct: 3   HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKS------------------------- 37

Query: 260 SSASSRTPLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGN--- 315
              +    +  LK H   ++ V W      I+T   D    +W  +    K  +V     
Sbjct: 38  --GNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRIN 95

Query: 316 KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQL 375
           ++   V ++P  K     S  + I +   + +    V                   +  L
Sbjct: 96  RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVL 155

Query: 376 FVSASFDNSVKLWDLR 391
             + S D   +++   
Sbjct: 156 LAAGSCDFKCRIFSAY 171

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.9 bits (99), Expect = 4e-05
 Identities = 14/76 (18%), Positives = 24/76 (31%), Gaps = 5/76 (6%)

Query: 157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESR 216
           P+   AW   D           +    I+E     N    +H  + H   +  V  +   
Sbjct: 9   PISCHAWN-KDRT--QIAICPNNHEVHIYEK--SGNKWVQVHELKEHNGQVTGVDWAPDS 63

Query: 217 QQFATGGWDCLLKIWS 232
            +  T G D    +W+
Sbjct: 64  NRIVTCGTDRNAYVWT 79

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.9 bits (151), Expect = 1e-11
 Identities = 34/316 (10%), Positives = 85/316 (26%), Gaps = 46/316 (14%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHK----LNIPGHGGPVKGVAWLYNDG 168
             D++S I        +L   +D S+ ++    + K    L    +  P+    ++ N  
Sbjct: 10  PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTD 69

Query: 169 KDAAFISVSTDQTAMIWE---------------WKVESNSIECIHVCRGHERGLETVTVS 213
                 +V  +   +                              +      GL  V   
Sbjct: 70  LQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDP 129

Query: 214 ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG 273
            +         +               D + +      +  + + +          T++ 
Sbjct: 130 RNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEE 189

Query: 274 HKEAISAVQWTAV----DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFF---------- 319
                       +    +    SS D  + +   +  G         +F           
Sbjct: 190 SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249

Query: 320 ------DVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDP 373
                  + +SP  K + TA +D  I  ++  ++    +K+    +++ V  V+ +    
Sbjct: 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWN--LQTRKKIKNFAKFNEDSV--VKIAC-SD 304

Query: 374 QLFVSASFDNSVKLWD 389
            +   A+ D++ K   
Sbjct: 305 NILCLATSDDTFKTNA 320

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.5 bits (103), Expect = 1e-05
 Identities = 6/37 (16%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
              + K+++  ++  P    L +  S+D S+ ++   
Sbjct: 6   IEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFD 41

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 7e-05
 Identities = 9/67 (13%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 270 TLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVG----NKSFFDVHYS 324
             +  K+ IS ++       ++ +SWD +L ++  ++     +++            ++ 
Sbjct: 6   IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFI 65

Query: 325 PLSKLVI 331
             + L I
Sbjct: 66  DNTDLQI 72

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 9e-04
 Identities = 16/260 (6%), Positives = 66/260 (25%), Gaps = 26/260 (10%)

Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGK-- 169
              +        + +D ++   +D  + +   R      I                    
Sbjct: 98  NEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMD 157

Query: 170 --DAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL 227
              +  I    +     +   +  +    I       +  +   + + ++ +A    D  
Sbjct: 158 TNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR 217

Query: 228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
           + +   D   +  + S+                +       +        +++++++   
Sbjct: 218 VAVEFFDDQGDDYNSSKR--------------FAFRCHRLNLKDTNLAYPVNSIEFSPRH 263

Query: 288 EIITS-SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKV 346
           + + +   D  +  W+ +                V  +    ++  A++D   +      
Sbjct: 264 KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNA--- 320

Query: 347 KEGAIVKSTFSSHKEWVQSV 366
                +  T   +   +  +
Sbjct: 321 ----AIDQTIELNASSIYII 336

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.7 bits (88), Expect = 0.001
 Identities = 21/223 (9%), Positives = 59/223 (26%), Gaps = 26/223 (11%)

Query: 194 IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDP----------- 242
           ++ + + +  +  +  + +  S+       WD  L ++  DI  +  D            
Sbjct: 1   MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60

Query: 243 ---------------SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD 287
                          +  G+           + + ++    + +    +        A  
Sbjct: 61  CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120

Query: 288 EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK 347
           + +    D              +                S  +I    + Q++ +   + 
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLC 180

Query: 348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           E        S  K  ++ V   P + + +  +S D  V +   
Sbjct: 181 EDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.6 bits (145), Expect = 8e-11
 Identities = 33/308 (10%), Positives = 85/308 (27%), Gaps = 32/308 (10%)

Query: 115 HDDWVSAIDFHNDWILTGCYDHSVHIW-------TRRGEHKLNIPGHGGPVKGVAWL--- 164
           HD  + ++   N + ++   D  + +W           +   +   H   +  V  L   
Sbjct: 13  HDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAI 72

Query: 165 -YNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG 223
             +  +     + S     + +    E  + + I                 + +  A+  
Sbjct: 73  ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASND 132

Query: 224 WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW 283
                ++ + D+         +     ++        +   +  + +     +  ++V  
Sbjct: 133 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDI 192

Query: 284 TAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSF-------FDVHYSPLSKLVITASAD 336
           +    I T   + T++I +              S          V +SP   L+  A   
Sbjct: 193 SERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 252

Query: 337 KQIRLYDP-------------KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383
                                     +       +H  WV S+ ++        SA +D 
Sbjct: 253 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDG 311

Query: 384 SVKLWDLR 391
            ++ WD++
Sbjct: 312 KLRFWDVK 319

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.0 bits (120), Expect = 1e-07
 Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 33/122 (27%)

Query: 270 TLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKL 329
             K H   I +V        ++ S D  LK+WD +L   ++    + S F          
Sbjct: 9   AGKAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF---------- 57

Query: 330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
                                 V  +   H + +Q++     +  L  + SF   +  + 
Sbjct: 58  ----------------------VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYR 95

Query: 390 LR 391
           + 
Sbjct: 96  IT 97

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.4 bits (95), Expect = 1e-04
 Identities = 35/319 (10%), Positives = 78/319 (24%), Gaps = 40/319 (12%)

Query: 101 LESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGE-----------HKL 149
                  S L  +     +    F    + T  +   +  +    E             L
Sbjct: 54  YSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLL 113

Query: 150 NIPGHGGPVKGVAWLYNDGKDAA--FISVSTDQTAMIWE-WKVESNSIECIHVCRGHERG 206
           +          + W  ++ +  +   ++     T  IW+       S             
Sbjct: 114 DSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLEL 173

Query: 207 LETVTVSESRQQF------------ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKK 254
             TV    +  QF            ATG  +  ++I                 + +    
Sbjct: 174 QGTVESPMTPSQFATSVDISERGLIATGFNNGTVQIS---ELSTLRPLYNFESQHSMINN 230

Query: 255 RKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG 314
                S   S    +    H    ++     + E        +L +          E   
Sbjct: 231 SNSIRSVKFSPQGSLLAIAHDS--NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 288

Query: 315 NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ----SVRWSP 370
           +     + ++   + + +A  D ++R +D  VK    +  T + H + ++     +    
Sbjct: 289 SSWVMSLSFNDSGETLCSAGWDGKLRFWD--VKTKERIT-TLNMHCDDIEIEEDILAVDE 345

Query: 371 IDPQLFVSASFDNSVKLWD 389
                         VK   
Sbjct: 346 -HGDSLAEPGVF-DVKFLK 362

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 27/256 (10%), Positives = 67/256 (26%), Gaps = 63/256 (24%)

Query: 108 SPLDCILHDDWVSAIDFHNDWIL-TGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYN 166
           +    +    + +++D     ++ TG  + +V I        L        +   +    
Sbjct: 176 TVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235

Query: 167 ----------------DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETV 210
                                      T+    I    V ++S +       H   + ++
Sbjct: 236 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSL 295

Query: 211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT 270
           + ++S +   + GWD  L+ W                                ++  + T
Sbjct: 296 SFNDSGETLCSAGWDGKLRFWDVK-----------------------------TKERITT 326

Query: 271 LKGHKEAIS----AVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326
           L  H + I      +      + +       +K                K +     + L
Sbjct: 327 LNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK-------------KGWRSGMGADL 373

Query: 327 SKLVITASADKQIRLY 342
           ++ +     D+ IR +
Sbjct: 374 NESLCCVCLDRSIRWF 389

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.8 bits (140), Expect = 3e-10
 Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 50/314 (15%)

Query: 115 HDDWV-SAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
           H   V + + F +++++TG  D  + ++ +   +  L + GH G V  + + +       
Sbjct: 11  HMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG----- 65

Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
            I VS      +  W ++      +            +   ++ +   TG  D  L +W 
Sbjct: 66  -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124

Query: 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASS---------------------------- 264
                   D  E  D        ++                                   
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 184

Query: 265 -------RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKS 317
                  +   I         S +        I++S D T++IWD E G +   + G+ +
Sbjct: 185 VWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 244

Query: 318 FFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFV 377
              +       LV  A+                     FS H   + ++    +   + V
Sbjct: 245 LVGLLRLSDKFLVSAAADGSIRGWDANDYSR------KFSYHHTNLSAITTFYVSDNILV 298

Query: 378 SASFDNSVKLWDLR 391
           S S +N   +++LR
Sbjct: 299 SGS-ENQFNIYNLR 311

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.0 bits (138), Expect = 5e-10
 Identities = 38/305 (12%), Positives = 87/305 (28%), Gaps = 33/305 (10%)

Query: 115 HDDWVSAIDFHND-WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAF 173
           HD  V A+ + +   +++G  D +V +W  +     ++            +         
Sbjct: 52  HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYI 111

Query: 174 ISVSTDQTAMIWEWKVESNSIE-----------------CIHVCRGHERGLETVTVSESR 216
           ++ S D T  +W+   ES+  +                    V           TVS   
Sbjct: 112 VTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG 171

Query: 217 QQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-----------SASSR 265
               +G +D  L +W     K     S + D   ++    +                   
Sbjct: 172 NIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 231

Query: 266 TPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP 325
              +                 D+ + S+               +     + +   +    
Sbjct: 232 NGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY 291

Query: 326 LSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV 385
           +S  ++ + ++ Q  +Y+  ++ G +V +      + + SV +      L  +   D   
Sbjct: 292 VSDNILVSGSENQFNIYN--LRSGKLVHANILKDADQIWSVNFKG--KTLVAAVEKDGQS 347

Query: 386 KLWDL 390
            L  L
Sbjct: 348 FLEIL 352

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.6 bits (85), Expect = 0.002
 Identities = 12/126 (9%), Positives = 31/126 (24%), Gaps = 9/126 (7%)

Query: 112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDA 171
            +     +  +   +D  L               ++      H   +  +   Y      
Sbjct: 238 TLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDN-- 295

Query: 172 AFISVSTDQTAMIWEWKVESNSIECIHV-CRGHERGLETVTVSESRQQFATGGWDCLLKI 230
             +   ++    I+  +    S + +H         + +V     +   A    D    +
Sbjct: 296 -ILVSGSENQFNIYNLR----SGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFL 349

Query: 231 WSADIS 236
              D S
Sbjct: 350 EILDFS 355

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 35/290 (12%), Positives = 70/290 (24%), Gaps = 40/290 (13%)

Query: 115 HDDWVSAIDFHND----WILTGCYDHSV---------HIWTRRGEHKLNIPGHGGPVKGV 161
               V+ + F       ++ +G     V            +     K       GP+  +
Sbjct: 62  GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121

Query: 162 AWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFAT 221
           +W   +G+    +    D   +   W    +      V    +R            +  T
Sbjct: 122 SW-DFEGRRLCVVGEGRDNFGVFISWD---SGNSLGEVSGHSQRINACHLKQSRPMRSMT 177

Query: 222 GGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV 281
            G D  +  +     K       +  +G+             S      +          
Sbjct: 178 VGDDGSVVFYQGPPFKFSASDRTHHKQGSF------VRDVEFSPDSGEFVITVGSDRKIS 231

Query: 282 QWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRL 341
            +           +   +                           S+   T  AD  IR+
Sbjct: 232 CFDGKSGEFLKYIEDDQEPVQ--------------GGIFALSWLDSQKFATVGADATIRV 277

Query: 342 YDPKVKEGAIVKS-TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           +D  V     V+  T    +   Q V          +S S D ++  ++L
Sbjct: 278 WD--VTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (89), Expect = 7e-04
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 321 VHYSPLSKLVITASADK-QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI-DPQLFVS 378
           + Y P +  +         +R  D    +   V          V +V++SPI   Q   S
Sbjct: 23  LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 82

Query: 379 ASFDNSVKLWDLR 391
                 V +W   
Sbjct: 83  GDESGKVIVWGWT 95

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

 Score = 55.2 bits (132), Expect = 5e-09
 Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 2/103 (1%)

Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
            +T      + + D     +K+ +    +      S   + +     D ++ + D  +KE
Sbjct: 35  SVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 94

Query: 349 GAIVKS--TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
              V      S  +    S      D      A +     + D
Sbjct: 95  PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 137

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 53.6 bits (127), Expect = 1e-08
 Identities = 30/309 (9%), Positives = 70/309 (22%), Gaps = 21/309 (6%)

Query: 95  VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---WILTGCYDHSVHIW----TRRGEH 147
           V+DV       +      +             D     +   +   ++       +   H
Sbjct: 22  VVDVASDTVYKSCV----MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 77

Query: 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGL 207
                  G   + +             +       +   + V+   +E      G E   
Sbjct: 78  ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 137

Query: 208 ETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP 267
                   +        D  L +   DI K      +           +K YS+      
Sbjct: 138 VRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 197

Query: 268 LITLKGHKEAISAVQWTAVD----EIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY 323
                   E               +  T+   +     D + G   ++   + +      
Sbjct: 198 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG 257

Query: 324 SPLSKLVITAS-ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD 382
               K          ++  YD  +K+  ++K+    H      V +              
Sbjct: 258 LRSPKDPNQIYGVLNRLAKYD--LKQRKLIKAANLDH--TYYCVAFDK-KGDKLYLGGTF 312

Query: 383 NSVKLWDLR 391
           N + +++  
Sbjct: 313 NDLAVFNPD 321

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 46.3 bits (108), Expect = 3e-06
 Identities = 22/264 (8%), Positives = 58/264 (21%), Gaps = 52/264 (19%)

Query: 82  TSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIW 141
           T  L    +     ++V          P+        V  +   +D  L         + 
Sbjct: 110 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMD 169

Query: 142 TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR 201
            + G++ + +P      KG +                      W  +   +    ++   
Sbjct: 170 VKTGKYTVALPLRNWNRKGYS---------------APDVLYFWPHQSPRHEFSMLYTI- 213

Query: 202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS 261
                       + +Q  AT                                        
Sbjct: 214 --------ARFKDDKQDPATADLLYGYLSVDL---------------------------- 237

Query: 262 ASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDV 321
            + +T         E       +  D        + L  +D +   +      + +++ V
Sbjct: 238 KTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCV 297

Query: 322 HYSPLSKLVITASADKQIRLYDPK 345
            +      +        + +++P 
Sbjct: 298 AFDKKGDKLYLGGTFNDLAVFNPD 321

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 42.8 bits (99), Expect = 5e-05
 Identities = 9/67 (13%), Positives = 21/67 (31%), Gaps = 2/67 (2%)

Query: 324 SPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN 383
               + +I  +    + + D       + KS     K    +   +P +   +V  +   
Sbjct: 5   KAGHEYMIVTNYPNNLHVVDVA--SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYG 62

Query: 384 SVKLWDL 390
            +   DL
Sbjct: 63  DIYGIDL 69

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

 Score = 38.6 bits (88), Expect = 9e-04
 Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 6/107 (5%)

Query: 289 IITSSWDHTLKIWDAELGGMKSEIV--GNKSFFDVHYSPLSK-LVITASADKQIRLYDP- 344
           +I +++ + L + D     +    V            +P ++   +  +    I   D  
Sbjct: 11  MIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 70

Query: 345 --KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
             K    A + S        + S   SP   +++ + +    +    
Sbjct: 71  TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 117

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 53.4 bits (126), Expect = 2e-08
 Identities = 25/278 (8%), Positives = 68/278 (24%), Gaps = 26/278 (9%)

Query: 115 HDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAA 172
           H    +         +  +G    +V IW       +           V  +  D +   
Sbjct: 57  HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116

Query: 173 FISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS 232
             +V   +      +  ++ +       +           S   +  +    + +     
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176

Query: 233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS 292
                +           +          +++                      +   +  
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD---------------GTIVLYNGVDG 221

Query: 293 SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV 352
           +     +    +              F + +SP    + +ASADK I++++  V    + 
Sbjct: 222 TKTGVFEDDSLKNVAHSGS------VFGLTWSPDGTKIASASADKTIKIWN--VATLKVE 273

Query: 353 KSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           K+     +   Q +       Q  VS S +  +   + 
Sbjct: 274 KTIPVGTRIEDQQLGIIW-TKQALVSISANGFINFVNP 310

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 38.7 bits (88), Expect = 8e-04
 Identities = 8/68 (11%), Positives = 20/68 (29%), Gaps = 5/68 (7%)

Query: 321 VHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSAS 380
           +  +P    +   +    +      V      +  ++ H       + SP       S  
Sbjct: 23  LGNTPAGDKIQYCN-GTSVYTVP--VGSLTDTE-IYTEHSHQTTVAKTSP-SGYYCASGD 77

Query: 381 FDNSVKLW 388
              +V++W
Sbjct: 78  VHGNVRIW 85

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 51.8 bits (122), Expect = 6e-08
 Identities = 25/306 (8%), Positives = 54/306 (17%), Gaps = 26/306 (8%)

Query: 90  ISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKL 149
           I      D   +    T        +   V A+    +       +    I T   E   
Sbjct: 59  IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK 118

Query: 150 ---NIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIW--EWKVESNSIECIHVCRGHE 204
                      +       N    A    +   +T         V       I       
Sbjct: 119 PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN 178

Query: 205 RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS 264
                       +      +  L       +     +                       
Sbjct: 179 SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPR 238

Query: 265 RTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYS 324
                  +     +         +         L+                  +    + 
Sbjct: 239 SMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLES-------------SILIYSVPVHG 285

Query: 325 PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNS 384
             +     A     +  YD K ++        +  K  +  +R S  D +  +    D  
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVKTRK-------VTEVKNNLTDLRLSA-DRKTVMVRKDDGK 337

Query: 385 VKLWDL 390
           +  + L
Sbjct: 338 IYTFPL 343

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

 Score = 39.8 bits (91), Expect = 3e-04
 Identities = 23/245 (9%), Positives = 51/245 (20%), Gaps = 32/245 (13%)

Query: 108 SPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYND 167
           +      +  +++           G    ++H++   G                     D
Sbjct: 131 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE---NSHDYAPAFD 187

Query: 168 GKDAAFISVSTDQTAMIWE---WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW 224
                   +S        +          +    V            +         G +
Sbjct: 188 ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEY 247

Query: 225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT 284
           D                           K+             +I L+      S     
Sbjct: 248 DLN----------------------DMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHG 285

Query: 285 AVDEII-TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYD 343
                   +     L  +D +     +E+  N +  D+  S   K V+    D +I  + 
Sbjct: 286 EFAAYYQGAPEKGVLLKYDVK-TRKVTEVKNNLT--DLRLSADRKTVMVRKDDGKIYTFP 342

Query: 344 PKVKE 348
            +  E
Sbjct: 343 LEKPE 347

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 49.2 bits (116), Expect = 5e-07
 Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 2/103 (1%)

Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
            +T      + + D +   +   I    +      S   + ++    D +I + D   KE
Sbjct: 35  SVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE 94

Query: 349 GAIVKS--TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD 389
              V         +    S      D      A +     + D
Sbjct: 95  PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMD 137

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 41.3 bits (95), Expect = 1e-04
 Identities = 24/283 (8%), Positives = 66/283 (23%), Gaps = 16/283 (5%)

Query: 95  VIDVEYLESTPTPSPLDCILHDDWVSAIDFHND--WILTGCYDHSVHIWTRRGEHKLNIP 152
            ID+   E+               +       D   +        + +     +      
Sbjct: 60  KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119

Query: 153 GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMI----WEWKVESNSIECIHVCRGHERGLE 208
                +      +   +    ++ + D + +         ++  +   +          E
Sbjct: 120 YDAETLS-RRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE 178

Query: 209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL 268
           T    +    +       ++        K+                  +    A     +
Sbjct: 179 TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238

Query: 269 ITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK 328
           + +     A++  +  A          + L+ +D E       +    S++ V+ S    
Sbjct: 239 MDVFYFSTAVNPAKTRAFG------AYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGS 292

Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI 371
            V    A   +  YD +  E    K           S+    +
Sbjct: 293 TVWLGGALGDLAAYDAETLE---KKGQVDLPGNASMSLASVRL 332

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 39.8 bits (91), Expect = 4e-04
 Identities = 8/65 (12%), Positives = 23/65 (35%), Gaps = 3/65 (4%)

Query: 328 KLVITASADKQIRLYDPKVKEGAIVKS-TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
             ++  +   ++ + D +  + A+ K  T +           +P     + + +   S+ 
Sbjct: 2   DYILAPARPDKLVVIDTE--KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLV 59

Query: 387 LWDLR 391
             DL 
Sbjct: 60  KIDLV 64

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.6 bits (88), Expect = 8e-04
 Identities = 24/218 (11%), Positives = 44/218 (20%), Gaps = 19/218 (8%)

Query: 104 TPTPSPLDCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNI----PGHGGPVK 159
               +    +   D         D     C D S+       E    I      H     
Sbjct: 136 LEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEF 195

Query: 160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF 219
            +       K    +  +        +    S   + +                    Q 
Sbjct: 196 LINHPAYSQKAGRLVWPTYTGKIHQIDL--SSGDAKFLPAVEALTEAERADGWRPGGWQQ 253

Query: 220 ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAIS 279
                             +R +                    A +   L   +     I 
Sbjct: 254 VAYHRALDRIYLL---VDQRDEWRHKTASRFVVVL------DAKTGERLAKFEMGH-EID 303

Query: 280 AVQWTAVDE---IITSSWDHTLKIWDAELGGMKSEIVG 314
           ++  +  ++      S+ D TL I DAE G     +  
Sbjct: 304 SINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 38.2 bits (87), Expect = 0.001
 Identities = 29/283 (10%), Positives = 67/283 (23%), Gaps = 20/283 (7%)

Query: 118 WVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAW------LYNDGKD 170
           +++        I  G     V ++         +I     P   V        L  DGK 
Sbjct: 60  FIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKT 119

Query: 171 AAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI 230
             F   S      + + +          +    +          +   F     D  L  
Sbjct: 120 LLFYQFSPAPAVGVVDLE----GKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAK 172

Query: 231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEII 290
            +                            S  +   +      K     +       + 
Sbjct: 173 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLP 232

Query: 291 TSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHY-SPLSKLVITASADKQIRLYDPKVKEG 349
                   +  D    G   ++  +++   ++            +A + + + D K  E 
Sbjct: 233 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE- 291

Query: 350 AIVKSTFSSHKEWVQSVRWSP-IDPQLFVSASFDNSVKLWDLR 391
              +         + S+  S    P L+  ++ D ++ + D  
Sbjct: 292 ---RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 23/304 (7%), Positives = 59/304 (19%), Gaps = 13/304 (4%)

Query: 91  SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFHND---WILTGCYDHSVHIWTRRGEH 147
                I V  L      +    +     V  +    D     +    +  V  +    + 
Sbjct: 11  PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 70

Query: 148 KLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-QTAMIWEWKVESNSIECIHVCRGHERG 206
                         A           IS     Q   +  +   + S+  +         
Sbjct: 71  GALT---------FAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVV 121

Query: 207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT 266
                +        +     L               S++G               A  R 
Sbjct: 122 DVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRH 181

Query: 267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL 326
            +               ++VD          ++         ++      +         
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241

Query: 327 SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK 386
             L         I ++        + K  F   +   +          L  +    + + 
Sbjct: 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS 301

Query: 387 LWDL 390
           ++++
Sbjct: 302 VYEI 305

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

 Score = 38.3 bits (87), Expect = 0.001
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 329 LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW 388
           + I +   +QI +++    EGA+  +        VQ +  SP    L+V    +  V  +
Sbjct: 6   VYIASPESQQIHVWNLN-HEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64

Query: 389 DL 390
            +
Sbjct: 65  RI 66

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 37.9 bits (86), Expect = 0.001
 Identities = 25/273 (9%), Positives = 62/273 (22%), Gaps = 17/273 (6%)

Query: 131 TGCYDHSVHIW-TRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV 189
                 ++ +      +    IP    P+ G      DG    +++ +      I +   
Sbjct: 7   ANSESDNISVIDVTSNKVTATIPVGSNPM-GAVI-SPDGT-KVYVANAHSNDVSIIDTAT 63

Query: 190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG 249
            +               +            A+     +    +      +   S  G   
Sbjct: 64  NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLAL 123

Query: 250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-----------SWDHTL 298
           +   K+    ++      +I         +     +   I  +                 
Sbjct: 124 SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSIS 183

Query: 299 KIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS 358
            I       + +  V             +K  +T        +         I       
Sbjct: 184 VIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITA-RIPV 242

Query: 359 HKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR 391
                  +  +P   +++V+ SF N+V + D  
Sbjct: 243 GP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

 Score = 36.4 bits (82), Expect = 0.004
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 4/60 (6%)

Query: 331 ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL 390
           I  S    I + D    +   V +T             SP   +++V+ +  N V + D 
Sbjct: 6   IANSESDNISVIDVTSNK---VTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDT 61

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 17/284 (5%), Positives = 58/284 (20%), Gaps = 26/284 (9%)

Query: 118 WVSAIDFHNDWILTGCYDHSVHIW-TRRGEHKLNIPGHGGP---VKGVAWLYNDGKDAAF 173
             +           G     V ++         +I     P   V     +  +   +A 
Sbjct: 78  DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137

Query: 174 ISVSTDQTAMIWEWKVESNSIECIHVCRG-----HERGLETVTVSESRQQFATGGWDCLL 228
           +      ++      V   S + +                    S      A+       
Sbjct: 138 LLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA--A 195

Query: 229 KIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE 288
              +  +  +         +   +        + +S      +                 
Sbjct: 196 PAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAG----------ATM 245

Query: 289 IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE 348
                 + + +  D         +   K+   +    +       +A +           
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS--V 303

Query: 349 GAIVKSTFSSHKEWVQSVRWSPID-PQLFVSASFDNSVKLWDLR 391
           G        S+     ++  +       + +++    + ++D  
Sbjct: 304 GQTSGPI--SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	391
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1gxra_	337	Groucho/tle1, C-terminal domain {Human (Homo sapie	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a1	311	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1k8kc_	371	Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur	100.0
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	100.0
d1erja_	388	Tup1, C-terminal domain {Baker's yeast (Saccharomy	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	100.0
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	100.0
d1pgua1	325	Actin interacting protein 1 {Baker's yeast (Saccha	100.0
d1nexb2	355	Cdc4 propeller domain {Baker's yeast (Saccharomyce	100.0
d1tbga_	340	beta1-subunit of the signal-transducing G protein	100.0
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.98
d1nr0a2	299	Actin interacting protein 1 {Nematode (Caenorhabdi	99.97
d1vyhc1	317	Platelet-activating factor acetylhydrolase IB subu	99.97
d1sq9a_	393	Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d1yfqa_	342	Cell cycle arrest protein BUB3 {Baker's yeast (Sac	99.96
d2ovrb2	342	F-box/WD repeat-containing protein 7, FBXW7 {Human	99.96
d1p22a2	293	F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom	99.95
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.95
d1pgua2	287	Actin interacting protein 1 {Baker's yeast (Saccha	99.94
d1k32a3	360	Tricorn protease domain 2 {Archaeon Thermoplasma a	99.9
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.89
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.87
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.85
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.82
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.82
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.79
d1pbyb_	337	Quinohemoprotein amine dehydrogenase B chain {Para	99.79
d1hzua2	426	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.79
d1qksa2	432	C-terminal (heme d1) domain of cytochrome cd1-nitr	99.77
d1l0qa2	301	Surface layer protein {Archaeon Methanosarcina maz	99.76
d1ri6a_	333	Putative isomerase YbhE {Escherichia coli [TaxId:	99.7
d1jmxb_	346	Quinohemoprotein amine dehydrogenase B chain {Pseu	99.68
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.67
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.64
d2madh_	373	Methylamine dehydrogenase, H-chain {Gram negative	99.56
d2bbkh_	355	Methylamine dehydrogenase, H-chain {Paracoccus den	99.49
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	99.39
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	99.29
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	99.25
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.23
d1qnia2	441	Nitrous oxide reductase, N-terminal domain {Pseudo	99.13
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	99.07
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	99.07
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	99.04
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	99.03
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.98
d1mdah_	368	Methylamine dehydrogenase, H-chain {Paracoccus den	98.97
d2bgra1	470	Dipeptidyl peptidase IV/CD26, N-terminal domain {P	98.93
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.81
d2p4oa1	302	Hypothetical protein All0351 homologue {Nostoc pun	98.8
d2hqsa1	269	TolB, C-terminal domain {Escherichia coli [TaxId:	98.77
d1q7fa_	279	Brain tumor cg10719-pa {Fruit fly (Drosophila mela	98.66
d1rwia_	260	Serine/threonine-protein kinase PknD {Mycobacteriu	98.59
d2dg1a1	319	Lactonase Drp35 {Staphylococcus aureus [TaxId: 128	98.57
d1jofa_	365	3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu	98.46
d1pjxa_	314	Diisopropylfluorophosphatase (phosphotriesterase,	98.42
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	98.2
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	98.15
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.89
d2ghsa1	295	Regucalcin {Agrobacterium tumefaciens [TaxId: 358]	97.88
d1xfda1	465	Dipeptidyl aminopeptidase-like protein 6, DPP6, N-	97.87
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	97.03
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	96.85
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	96.79
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	96.58
d1k32a2	281	Tricorn protease N-terminal domain {Archaeon Therm	96.55
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	96.17
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	95.96
d1npea_	263	Nidogen {Mouse (Mus musculus) [TaxId: 10090]}	95.88
d1k3ia3	387	Galactose oxidase, central domain {Fungi (Fusarium	95.29
d1h6la_	353	Thermostable phytase (3-phytase) {Bacillus amyloli	95.14
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	95.05
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.65
d1fwxa2	459	Nitrous oxide reductase, N-terminal domain {Paraco	94.49
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	94.41
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	94.33
d2ad6a1	571	Methanol dehydrogenase, heavy chain {Methylophilus	94.31
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	94.1
d1kb0a2	573	Quinoprotein alcohol dehydrogenase, N-terminal dom	93.47
d1ijqa1	266	Low density lipoprotein (LDL) receptor {Human (Hom	91.63
d1v04a_	340	Serum paraoxonase/arylesterase 1, PON1 {Rabit (Ory	91.59
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	91.57
d1xipa_	381	Nucleoporin NUP159 {Baker's yeast (Saccharomyces c	91.04
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	90.82
d1flga_	582	Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax	90.39
d1qfma1	430	Prolyl oligopeptidase, N-terminal domain {Pig (Sus	87.66
d1w6sa_	596	Methanol dehydrogenase, heavy chain {Methylobacter	85.57
d1zgka1	288	Kelch-like ECH-associated protein 1, KEAP1 {Human	84.55
d1kv9a2	560	Quinoprotein alcohol dehydrogenase, N-terminal dom	84.06
d1utca2	327	Clathrin heavy-chain terminal domain {Rat (Rattus	82.07
d1jtdb_	273	beta-lactamase inhibitor protein-II, BLIP-II {Stre	81.68

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-39  Score=277.78  Aligned_cols=246  Identities=22%  Similarity=0.443  Sum_probs=208.0

Q ss_pred             CCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEec-----------------
Q psy2107         107 PSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYN-----------------  166 (391)
Q Consensus       107 ~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~-----------------  166 (391)
                      +....+.||.+.|++++|+  +++|+||+.||+|+|||+ +++.+..+.+|...|.+++|.|.                 
T Consensus         8 ~~~~~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~   87 (317)
T d1vyhc1           8 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD   87 (317)
T ss_dssp             SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred             CccEEEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccc
Confidence            3345678899999999998  679999999999999998 56667777788888888877443                 


Q ss_pred             ----------------------CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         167 ----------------------DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       167 ----------------------~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                                            ++++..+++++.|+.+++||++    ....+..+.+|...+.+++|+|++++|++++.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  163 (317)
T d1vyhc1          88 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQ----TGYCVKTFTGHREWVRMVRPNQDGTLIASCSN  163 (317)
T ss_dssp             TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETT----TCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred             ccccccccccccccccceeeeccCCCceEEeeccCcceeEeecc----cceeeeEEccCCCcceeeecccCCCEEEEEeC
Confidence                                  3456678889999999999954    33567788899999999999999999999999


Q ss_pred             CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-------------------
Q psy2107         225 DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-------------------  285 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------------  285 (391)
                      |+.|++|+..+..                             ....+.+|...+.++.|++                   
T Consensus       164 d~~v~~~~~~~~~-----------------------------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (317)
T d1vyhc1         164 DQTVRVWVVATKE-----------------------------CKAELREHRHVVECISWAPESSYSSISEATGSETKKSG  214 (317)
T ss_dssp             TSCEEEEETTTCC-----------------------------EEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred             CCeEEEEeeccce-----------------------------eeEEEecCCCCceEEEEeeccccceeeccccceeeeec
Confidence            9999999997633                             4445555666666665543                   


Q ss_pred             --CCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCc
Q psy2107         286 --VDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEW  362 (391)
Q Consensus       286 --~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~  362 (391)
                        +..+++++.|+.|++||+++++++.++..+. .+.+++|+|++++|++|+.||.|++||+++++   ++..+.+|.+.
T Consensus       215 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~---~~~~~~~h~~~  291 (317)
T d1vyhc1         215 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKR---CMKTLNAHEHF  291 (317)
T ss_dssp             --CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSC---CCEEEECCSSC
T ss_pred             cCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCc---EEEEEcCCCCC
Confidence              3458899999999999999999999998765 89999999999999999999999999998766   67788999999


Q ss_pred             EEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         363 VQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       363 v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      |++++|+| ++.+|+||+.||+|+|||
T Consensus       292 V~~~~~s~-~~~~l~s~s~Dg~i~iWd  317 (317)
T d1vyhc1         292 VTSLDFHK-TAPYVVTGSVDQTVKVWE  317 (317)
T ss_dssp             EEEEEECS-SSSCEEEEETTSEEEEEC
T ss_pred             EEEEEEcC-CCCEEEEEeCCCeEEEeC
Confidence            99999999 556799999999999997

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.3e-39  Score=277.15  Aligned_cols=243  Identities=17%  Similarity=0.263  Sum_probs=207.7

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      ++.||.+.|++++|+  +++|++|+.||+|+|||+ ++..+..+..|..+|.+++|   ++++.++++|+.|+.+++|+.
T Consensus        50 tL~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~---~~~~~~l~~~~~d~~i~~~~~  126 (340)
T d1tbga_          50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY---APSGNYVACGGLDNICSIYNL  126 (340)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEEECSCSCEEEEEE---CTTSSEEEEEETTCCEEEEES
T ss_pred             EECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccceeEEEEecccccEEeeEe---eccceeeeeecccceeecccc
Confidence            466899999999998  669999999999999999 66777788899999999999   778999999999999999985


Q ss_pred             cCCCCceeEEEEE-----------------------------------------ecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         188 KVESNSIECIHVC-----------------------------------------RGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       188 ~~~~~~~~~~~~~-----------------------------------------~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                      ............+                                         ..+...+....+.+.+.++++|+.|+
T Consensus       127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  206 (340)
T d1tbga_         127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA  206 (340)
T ss_dssp             SSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTT
T ss_pred             cccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccceeEEeecCc
Confidence            4332222222222                                         23445677888888899999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCCeEEEEeccc
Q psy2107         227 LLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAEL  305 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~  305 (391)
                      .|++||+++                             ..++..+.+|...|++++|+|++ .|++|+.|+.|++||++.
T Consensus       207 ~v~i~d~~~-----------------------------~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~  257 (340)
T d1tbga_         207 SAKLWDVRE-----------------------------GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA  257 (340)
T ss_dssp             EEEEEETTT-----------------------------TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             eEEEEECCC-----------------------------CcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecc
Confidence            999999976                             44677888999999999999655 589999999999999999


Q ss_pred             CceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCC
Q psy2107         306 GGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFD  382 (391)
Q Consensus       306 ~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d  382 (391)
                      ......+...   .++.+++|+|++++|++|+.||.|++||+.+++   ++..+.+|.++|++++|+| ++.+|+||+.|
T Consensus       258 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~---~~~~~~~H~~~V~~l~~s~-d~~~l~s~s~D  333 (340)
T d1tbga_         258 DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD---RAGVLAGHDNRVSCLGVTD-DGMAVATGSWD  333 (340)
T ss_dssp             TEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECT-TSSCEEEEETT
T ss_pred             cccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEeC-CCCEEEEEccC
Confidence            8887776433   379999999999999999999999999998776   7888999999999999999 56679999999


Q ss_pred             CcEEEEe
Q psy2107         383 NSVKLWD  389 (391)
Q Consensus       383 g~v~iwd  389 (391)
                      |+|+|||
T Consensus       334 g~v~iWd  340 (340)
T d1tbga_         334 SFLKIWN  340 (340)
T ss_dssp             SCEEEEC
T ss_pred             CEEEEeC
Confidence            9999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-38  Score=274.28  Aligned_cols=272  Identities=13%  Similarity=0.223  Sum_probs=228.4

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCC---cccCCCCcEEEEEec--CCEEEEEECCCeEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPL---DCILHDDWVSAIDFH--NDWILTGCYDHSVHI  140 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~i  140 (391)
                      ....|.++|++|++          . .++.+++|...........   ...+|.+.|++++|+  +++|++|+.||.|++
T Consensus        55 ~~v~fs~~g~~lat----------g-~dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~i  123 (337)
T d1gxra_          55 CAVTISNPTRHVYT----------G-GKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI  123 (337)
T ss_dssp             CEEEECSSSSEEEE----------E-CBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred             EEEEECCCCCEEEE----------E-ECCEEEEEEccCCcccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccc
Confidence            45689999998876          2 3678999987654443332   345799999999998  679999999999999


Q ss_pred             EcCCC---ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC
Q psy2107         141 WTRRG---EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ  217 (391)
Q Consensus       141 wd~~~---~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~  217 (391)
                      ||+..   .....+..|...+.+++|   ++++.++++++.|+.|++|++.    ...+.....+|...|.+++|++++.
T Consensus       124 wd~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~s~~~d~~i~~~~~~----~~~~~~~~~~~~~~v~~l~~s~~~~  196 (337)
T d1gxra_         124 WDLAAPTPRIKAELTSSAPACYALAI---SPDSKVCFSCCSDGNIAVWDLH----NQTLVRQFQGHTDGASCIDISNDGT  196 (337)
T ss_dssp             EECCCC--EEEEEEECSSSCEEEEEE---CTTSSEEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSS
T ss_pred             cccccccccccccccccccccccccc---cccccccccccccccccccccc----ccccccccccccccccccccccccc
Confidence            99843   344567789999999999   7788999999999999999964    3456777888999999999999999


Q ss_pred             EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC
Q psy2107         218 QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH  296 (391)
Q Consensus       218 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg  296 (391)
                      .+++|+.||.+++||+++++                             .+..+ .|...|.+++|++++ .+++++.|+
T Consensus       197 ~~~~~~~d~~v~i~d~~~~~-----------------------------~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~  246 (337)
T d1gxra_         197 KLWTGGLDNTVRSWDLREGR-----------------------------QLQQH-DFTSQIFSLGYCPTGEWLAVGMESS  246 (337)
T ss_dssp             EEEEEETTSEEEEEETTTTE-----------------------------EEEEE-ECSSCEEEEEECTTSSEEEEEETTS
T ss_pred             ccccccccccccccccccce-----------------------------eeccc-ccccceEEEEEcccccccceecccc
Confidence            99999999999999997633                             33333 478899999999654 588999999


Q ss_pred             eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEE
Q psy2107         297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLF  376 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l  376 (391)
                      .+++||++++.......+...|.+++|+|++++|++|+.||.|++||+..++   .+..+ .|...|++++|+| ++++|
T Consensus       247 ~i~i~d~~~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~---~~~~~-~~~~~v~~~~~s~-d~~~l  321 (337)
T d1gxra_         247 NVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA---SIFQS-KESSSVLSCDISV-DDKYI  321 (337)
T ss_dssp             CEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC---EEEEE-ECSSCEEEEEECT-TSCEE
T ss_pred             ccccccccccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCC---EEEEc-cCCCCEEEEEEeC-CCCEE
Confidence            9999999998887766666799999999999999999999999999998765   44444 4888999999999 66789


Q ss_pred             EEeeCCCcEEEEec
Q psy2107         377 VSASFDNSVKLWDL  390 (391)
Q Consensus       377 ~s~~~dg~v~iwdl  390 (391)
                      ++|+.||+|+||||
T Consensus       322 ~t~s~D~~I~vWdl  335 (337)
T d1gxra_         322 VTGSGDKKATVYEV  335 (337)
T ss_dssp             EEEETTSCEEEEEE
T ss_pred             EEEeCCCeEEEEEE
Confidence            99999999999997

>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Groucho/tle1, C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-37  Score=266.87  Aligned_cols=240  Identities=15%  Similarity=0.262  Sum_probs=208.1

Q ss_pred             ccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEE
Q psy2107         112 CILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAM  183 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~  183 (391)
                      .++|.+.|+|++|+  +++|++|+ ||.|+|||++..      ......+|.+.|.+++|   ++++++|++|+.||.|+
T Consensus        47 ~~~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~---s~dg~~l~s~~~dg~i~  122 (337)
T d1gxra_          47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL---LPDGCTLIVGGEASTLS  122 (337)
T ss_dssp             EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE---CTTSSEEEEEESSSEEE
T ss_pred             ECCCCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCcccceeEEeeecCCCCcEEEEEE---cCCCCEEEEeecccccc
Confidence            34799999999998  66999987 899999998321      23345589999999999   77899999999999999


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCC
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSAS  263 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (391)
                      +||+.  .........+..|...+.+++|+|++.++++++.|+.|++|++.+                            
T Consensus       123 iwd~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~----------------------------  172 (337)
T d1gxra_         123 IWDLA--APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN----------------------------  172 (337)
T ss_dssp             EEECC--CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----------------------------
T ss_pred             ccccc--ccccccccccccccccccccccccccccccccccccccccccccc----------------------------
Confidence            99964  445566778889999999999999999999999999999999976                            


Q ss_pred             CCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEE
Q psy2107         264 SRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLY  342 (391)
Q Consensus       264 ~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iw  342 (391)
                       .........|...|.+++|+++ ..+++++.|+.+++||+++++.+..+.....+.+++|+|++++|++|+.|+.+++|
T Consensus       173 -~~~~~~~~~~~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~  251 (337)
T d1gxra_         173 -QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVL  251 (337)
T ss_dssp             -TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred             -ccccccccccccccccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceeccccccccc
Confidence             3356677789999999999954 56899999999999999999999999988899999999999999999999999999


Q ss_pred             cCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         343 DPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       343 d~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |++...   . .....|...|++++|+| ++.+|++++.||.|++||++
T Consensus       252 d~~~~~---~-~~~~~~~~~i~~v~~s~-~g~~l~s~s~Dg~i~iwd~~  295 (337)
T d1gxra_         252 HVNKPD---K-YQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTP  295 (337)
T ss_dssp             ETTSSC---E-EEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             cccccc---c-ccccccccccceEEECC-CCCEEEEEeCCCeEEEEECC
Confidence            998765   3 35567999999999999 66789999999999999974

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.3e-38  Score=267.88  Aligned_cols=270  Identities=18%  Similarity=0.269  Sum_probs=214.9

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...++.++|+.++.           ...+.+.+|.......  ...+.+|.+.|+|++|+  +++|++|+.||+|+|||+
T Consensus        21 ~~~a~~~~g~~l~~-----------~~~~~v~i~~~~~~~~--~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~   87 (311)
T d1nr0a1          21 VVLGNTPAGDKIQY-----------CNGTSVYTVPVGSLTD--TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT   87 (311)
T ss_dssp             CCCEECTTSSEEEE-----------EETTEEEEEETTCSSC--CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred             EEEEEcCCCCEEEE-----------EeCCEEEEEECCCCce--eEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeee
Confidence            34577788866653           1344566666543222  23346899999999998  679999999999999998


Q ss_pred             CC-c--eEEeccCCCCCeeEEEEEecCCCCeEEEEEeC--CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCE
Q psy2107         144 RG-E--HKLNIPGHGGPVKGVAWLYNDGKDAAFISVST--DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQ  218 (391)
Q Consensus       144 ~~-~--~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~  218 (391)
                      .. .  ....+..|.++|.+++|   ++++.++++++.  +..+++|+++..    +....+.+|...|.+++|+|++++
T Consensus        88 ~~~~~~~~~~~~~~~~~v~~v~~---s~d~~~l~~~~~~~~~~~~v~~~~~~----~~~~~l~~h~~~v~~v~~~~~~~~  160 (311)
T d1nr0a1          88 TQTTHILKTTIPVFSGPVKDISW---DSESKRIAAVGEGRERFGHVFLFDTG----TSNGNLTGQARAMNSVDFKPSRPF  160 (311)
T ss_dssp             SSTTCCEEEEEECSSSCEEEEEE---CTTSCEEEEEECCSSCSEEEEETTTC----CBCBCCCCCSSCEEEEEECSSSSC
T ss_pred             eccccccccccccccCccccccc---cccccccccccccccccccccccccc----ccccccccccccccccccccccee
Confidence            43 2  33467789999999999   778889998886  456999997532    345567889999999999999875


Q ss_pred             -EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEECCC
Q psy2107         219 -FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSSWDH  296 (391)
Q Consensus       219 -l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~~dg  296 (391)
                       |++|+.||.|++||+++                             .+....+..|..+|.++.|+|++ .+++++.|+
T Consensus       161 ~l~sgs~d~~i~i~d~~~-----------------------------~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~  211 (311)
T d1nr0a1         161 RIISGSDDNTVAIFEGPP-----------------------------FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDG  211 (311)
T ss_dssp             EEEEEETTSCEEEEETTT-----------------------------BEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred             eecccccccccccccccc-----------------------------cccccccccccccccccccCccccccccccccc
Confidence             88899999999999976                             34567788899999999999654 588899999


Q ss_pred             eEEEEecccCceeEEEEC--------CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc---CcEEE
Q psy2107         297 TLKIWDAELGGMKSEIVG--------NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK---EWVQS  365 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~~--------~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~---~~v~~  365 (391)
                      .|++||+.++.....+..        ...|.+++|+|++++|++|+.||.|+|||+++++   ++..+..|.   ..+.+
T Consensus       212 ~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~---~~~~l~~~~~~~~~~~~  288 (311)
T d1nr0a1         212 TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK---VEKTIPVGTRIEDQQLG  288 (311)
T ss_dssp             CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSGGGCEEE
T ss_pred             cccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCc---EEEEEECCCCccceEEE
Confidence            999999999888777653        3479999999999999999999999999998765   666666554   35566


Q ss_pred             EEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         366 VRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       366 ~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +.|++   ..|++++.||.|++||+
T Consensus       289 ~~~~~---~~l~s~s~dG~i~~wd~  310 (311)
T d1nr0a1         289 IIWTK---QALVSISANGFINFVNP  310 (311)
T ss_dssp             EEECS---SCEEEEETTCCEEEEET
T ss_pred             EEecC---CEEEEEECCCEEEEEeC
Confidence            77754   35899999999999996

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=2.6e-37  Score=271.55  Aligned_cols=301  Identities=17%  Similarity=0.194  Sum_probs=228.8

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR  143 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~  143 (391)
                      ...+|.++|+++++          .+.++.+.+|............+.+|.++|++++|+  +++|++|+.|++|+|||+
T Consensus        11 t~~~~s~dg~~la~----------~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~   80 (371)
T d1k8kc_          11 SCHAWNKDRTQIAI----------CPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL   80 (371)
T ss_dssp             CEEEECTTSSEEEE----------ECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred             EEEEECCCCCEEEE----------EeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEee
Confidence            45689999988865          235678999987543322344566899999999998  779999999999999999


Q ss_pred             CCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107         144 RGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA  220 (391)
Q Consensus       144 ~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~  220 (391)
                      ...   ....+.+|...|.+++|   +|+++.|++|+.|+++++|+++..............|...|.+++|+|++++|+
T Consensus        81 ~~~~~~~~~~~~~~~~~v~~i~~---~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~  157 (371)
T d1k8kc_          81 KGRTWKPTLVILRINRAARCVRW---APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLA  157 (371)
T ss_dssp             ETTEEEEEEECCCCSSCEEEEEE---CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEE
T ss_pred             ccccccccccccccccccccccc---ccccccceeecccCcceeeeeeccccccccccccccccccccccccccccccee
Confidence            433   34456789999999999   778999999999999999998765554555566678999999999999999999


Q ss_pred             EEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEE
Q psy2107         221 TGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLK  299 (391)
Q Consensus       221 sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~  299 (391)
                      +|+.||.|++|+...............           ...............|...|.+++|+|+ ..+++++.|+.|+
T Consensus       158 s~s~D~~v~v~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~  226 (371)
T d1k8kc_         158 AGSCDFKCRIFSAYIKEVEERPAPTPW-----------GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC  226 (371)
T ss_dssp             EEETTSCEEEEECCCTTTSCCCCCBTT-----------BSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred             ccccCcEEEEEeeccCccccccccccc-----------cccccceeeeeeccCccCcEEEEEeecccccccccccCCcce
Confidence            999999999999876443221110000           0011123455667789999999999965 4588999999999


Q ss_pred             EEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce---------------------------
Q psy2107         300 IWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI---------------------------  351 (391)
Q Consensus       300 iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~---------------------------  351 (391)
                      +||+.++..+..+..+. +|.+++|+|++++|++|+ |+.+++|.........                           
T Consensus       227 iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (371)
T d1k8kc_         227 LADADKKMAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLD  305 (371)
T ss_dssp             EEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCC
T ss_pred             EEeeecccceeeeecccccceeeeecCCCCEEEEEc-CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEeccc
Confidence            99999999999988766 899999999998888765 7777666543211100                           


Q ss_pred             -----------EEEEeccccCcEEEEEECCCCC---CEEEEeeCCCcEEEEecC
Q psy2107         352 -----------VKSTFSSHKEWVQSVRWSPIDP---QLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       352 -----------~~~~~~~h~~~v~~~~~~~~~~---~~l~s~~~dg~v~iwdlr  391 (391)
                                 .......|.+.|+++++.+.+.   ..|+|+|.||.|+|||++
T Consensus       306 ~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~  359 (371)
T d1k8kc_         306 KKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR  359 (371)
T ss_dssp             CCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred             ceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEEcCCCeEEEEeCC
Confidence                       0001123888999999977332   468999999999999973

>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.5e-36  Score=259.61  Aligned_cols=238  Identities=18%  Similarity=0.185  Sum_probs=198.8

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      +++.+.+++++  ++.|+.++ ++.|.+||+. ......+.+|...|++++|   +|++++|++|+.||+|++||+.  .
T Consensus        16 ~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~~~~~~H~~~v~~~~~---sp~g~~latg~~dg~i~iwd~~--~   89 (311)
T d1nr0a1          16 ARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKT---SPSGYYCASGDVHGNVRIWDTT--Q   89 (311)
T ss_dssp             CTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEESS--S
T ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCCceeEEEcCCCCCEEEEEE---eCCCCeEeccccCceEeeeeee--c
Confidence            33444556665  77888775 5679999994 5566678899999999999   7789999999999999999965  3


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                      ........+..|..+|.+++|+|++++|++++.  +..+++|+++++                             +...
T Consensus        90 ~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~-----------------------------~~~~  140 (311)
T d1nr0a1          90 TTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG-----------------------------TSNG  140 (311)
T ss_dssp             TTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC-----------------------------CBCB
T ss_pred             cccccccccccccCccccccccccccccccccccccccccccccccc-----------------------------cccc
Confidence            343455667889999999999999999999886  456999999763                             3455


Q ss_pred             eecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         270 TLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      .+.+|...|.+++|+|++  .+++|+.|+.|++||+++++....+..+. +|.+++|+|+++++++|+.|+.|++||++.
T Consensus       141 ~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~  220 (311)
T d1nr0a1         141 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD  220 (311)
T ss_dssp             CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred             cccccccccccccccccceeeecccccccccccccccccccccccccccccccccccCcccccccccccccccccccccc
Confidence            678899999999999654  37889999999999999999988887755 899999999999999999999999999987


Q ss_pred             CCcceEEEE-------eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         347 KEGAIVKST-------FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       347 ~~~~~~~~~-------~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..   ....       ..+|.+.|++++|+| ++.+|++|+.||.|+|||++
T Consensus       221 ~~---~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~tgs~Dg~v~iwd~~  268 (311)
T d1nr0a1         221 GT---KTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIWNVA  268 (311)
T ss_dssp             CC---EEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred             cc---ccccccccccccccccccccccccCC-CCCEEEEEeCCCeEEEEECC
Confidence            65   3332       236889999999999 66789999999999999974

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.9e-36  Score=266.32  Aligned_cols=281  Identities=20%  Similarity=0.355  Sum_probs=211.0

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccC----------------CCCCCcccCCCCcEEEEEec--CC
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTP----------------TPSPLDCILHDDWVSAIDFH--ND  127 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~h~~~V~~~~~~--~~  127 (391)
                      ...+|+++|++|+++           .++.+++|......                .........|...|++++|+  ++
T Consensus        66 ~~l~fs~dg~~lasg-----------~d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~  134 (388)
T d1erja_          66 CCVKFSNDGEYLATG-----------CNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK  134 (388)
T ss_dssp             CEEEECTTSSEEEEE-----------CBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS
T ss_pred             EEEEECCCCCEEEEE-----------eCCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCC
Confidence            457899999988762           25667777643211                11123344688999999998  66


Q ss_pred             EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         128 WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                      +|++|+.||.|++||. .+.......+|...|.++.|   ++++..+++++.++.+++||..    ..........+.. 
T Consensus       135 ~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~---~~~~~~~~~~~~~~~i~~~d~~----~~~~~~~~~~~~~-  206 (388)
T d1erja_         135 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDY---FPSGDKLVSGSGDRTVRIWDLR----TGQCSLTLSIEDG-  206 (388)
T ss_dssp             EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSEEEEEETT----TTEEEEEEECSSC-
T ss_pred             cceeccccccccccccccccccccccccccccccccc---ccccccccccccceeeeeeecc----ccccccccccccc-
Confidence            9999999999999999 56677788899999999999   7788899999999999999954    3344455555544 


Q ss_pred             eEEEEEc-CCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc
Q psy2107         207 LETVTVS-ESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA  285 (391)
Q Consensus       207 v~~l~~~-~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~  285 (391)
                      ..++.++ +++++|++|+.||.|++||.+++......                      ........+|...|.+++|++
T Consensus       207 ~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~----------------------~~~~~~~~~h~~~v~~l~~s~  264 (388)
T d1erja_         207 VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL----------------------DSENESGTGHKDSVYSVVFTR  264 (388)
T ss_dssp             EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE----------------------C------CCCSSCEEEEEECT
T ss_pred             cccccccCCCCCeEEEEcCCCeEEEeecccCccceee----------------------ccccccccCCCCCEEEEEECC
Confidence            4455554 58899999999999999999875432100                      112233457899999999996


Q ss_pred             C-CeEEEEECCCeEEEEecccCceeE------------EEEC-CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcce
Q psy2107         286 V-DEIITSSWDHTLKIWDAELGGMKS------------EIVG-NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAI  351 (391)
Q Consensus       286 ~-~~l~s~~~dg~i~iwd~~~~~~~~------------~~~~-~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~  351 (391)
                      + ..|++++.|+.|++||++++....            .... ...+.+++|+|++++|++|+.||.|++||+++++   
T Consensus       265 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~---  341 (388)
T d1erja_         265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN---  341 (388)
T ss_dssp             TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC---
T ss_pred             CCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCc---
Confidence            5 458999999999999998654322            2222 3478999999999999999999999999998877   


Q ss_pred             EEEEeccccCcEEEEEE------CCCCCCEEEEeeCCCcEEEEecC
Q psy2107         352 VKSTFSSHKEWVQSVRW------SPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       352 ~~~~~~~h~~~v~~~~~------~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++..+.+|.+.|+++++      +| ++.+|+||+.||+|+|||++
T Consensus       342 ~~~~l~~H~~~V~~~~~~~~~~~sp-d~~~l~s~s~Dg~I~iW~~~  386 (388)
T d1erja_         342 PLLMLQGHRNSVISVAVANGSSLGP-EYNVFATGSGDCKARIWKYK  386 (388)
T ss_dssp             EEEEEECCSSCEEEEEECSSCTTCT-TCEEEEEEETTSEEEEEEEE
T ss_pred             EEEEEeCCCCCEEEEEEecCcccCC-CCCEEEEEeCCCEEEEEeee
Confidence            78889999999999986      45 56789999999999999985

>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Arp2/3 complex 41 kDa subunit ARPC1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-36  Score=264.03  Aligned_cols=241  Identities=20%  Similarity=0.258  Sum_probs=196.3

Q ss_pred             CCCcEEEEEec--CCEEEEEECCCeEEEEcCCCc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecC
Q psy2107         115 HDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKV  189 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~  189 (391)
                      +.++|+|++|+  +++||+|+.||.|+|||.++.   ....+.+|.++|.+++|   +|++++|++|+.|++|++||+. 
T Consensus         6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~f---sp~~~~l~s~s~D~~i~vWd~~-   81 (371)
T d1k8kc_           6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDW---APDSNRIVTCGTDRNAYVWTLK-   81 (371)
T ss_dssp             CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEE---ETTTTEEEEEETTSCEEEEEEE-
T ss_pred             CCCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCEEEEEEecCCCCCEEEEEE---CCCCCEEEEEECCCeEEEEeec-
Confidence            34689999998  669999999999999998543   45567899999999999   5678899999999999999975 


Q ss_pred             CCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCcee
Q psy2107         190 ESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLI  269 (391)
Q Consensus       190 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (391)
                       .........+.+|...|++++|+|+++.|++|+.|+.|++|+++.....                         .....
T Consensus        82 -~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~-------------------------~~~~~  135 (371)
T d1k8kc_          82 -GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDW-------------------------WVCKH  135 (371)
T ss_dssp             -TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTE-------------------------EEEEE
T ss_pred             -ccccccccccccccccccccccccccccceeecccCcceeeeeeccccc-------------------------ccccc
Confidence             4455666777889999999999999999999999999999998753320                         11233


Q ss_pred             eecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCc------------------eeEEEECC-eeeEEEEECCCCCE
Q psy2107         270 TLKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGG------------------MKSEIVGN-KSFFDVHYSPLSKL  329 (391)
Q Consensus       270 ~~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~------------------~~~~~~~~-~~i~~~~~~p~~~~  329 (391)
                      ....|...|.+++|+|++ .|++|+.|++|++||.....                  .+.....+ ..+.+++|+|++++
T Consensus       136 ~~~~~~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~  215 (371)
T d1k8kc_         136 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR  215 (371)
T ss_dssp             ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred             cccccccccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeeeeccCccCcEEEEEeeccccc
Confidence            456788999999999765 58899999999999986432                  22333333 37899999999999


Q ss_pred             EEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         330 VITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      |++++.|+.|++||+....   .+..+..|..+|++++|+| ++.+|+ ++.|+.+++|+.
T Consensus       216 l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~v~s~~fs~-d~~~la-~g~d~~~~~~~~  271 (371)
T d1k8kc_         216 VAWVSHDSTVCLADADKKM---AVATLASETLPLLAVTFIT-ESSLVA-AGHDCFPVLFTY  271 (371)
T ss_dssp             EEEEETTTEEEEEEGGGTT---EEEEEECSSCCEEEEEEEE-TTEEEE-EETTSSCEEEEE
T ss_pred             ccccccCCcceEEeeeccc---ceeeeecccccceeeeecC-CCCEEE-EEcCCceEEEEe
Confidence            9999999999999998765   6778889999999999999 556565 455888877753

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.1e-34  Score=245.12  Aligned_cols=247  Identities=15%  Similarity=0.177  Sum_probs=183.0

Q ss_pred             cccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-CceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         111 DCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .+.||.+.|++++|+  +++|++|+.||+|++||+. +.....+. .|...|++++|   ++++. +++++.|+.+++|+
T Consensus         7 ~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~---~~~g~-~~~~~~d~~v~~~~   82 (299)
T d1nr0a2           7 VRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT---TSKGD-LFTVSWDDHLKVVP   82 (299)
T ss_dssp             EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE---CTTSC-EEEEETTTEEEEEC
T ss_pred             EcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCCcEEEEEe---eccce-eecccceeeEEEec
Confidence            356899999999998  6699999999999999994 55566553 68999999999   66665 56677899999998


Q ss_pred             ecCCCCc-ee-----------E-----------------EEEE-------ecCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy2107         187 WKVESNS-IE-----------C-----------------IHVC-------RGHERGLETVTVSESRQQFATGGWDCLLKI  230 (391)
Q Consensus       187 ~~~~~~~-~~-----------~-----------------~~~~-------~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i  230 (391)
                      ....... ..           .                 +..+       ......+.+++|+|++++|++|+.||.|++
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~  162 (299)
T d1nr0a2          83 AGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHV  162 (299)
T ss_dssp             SSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred             cCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            5421100 00           0                 0000       012335667777777777788888888888


Q ss_pred             EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECCCeEEEEecccCcee
Q psy2107         231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWDHTLKIWDAELGGMK  309 (391)
Q Consensus       231 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~  309 (391)
                      ||+++.+.                            .......|...|.+++|+++ ..+++++.|+.|++||+.++...
T Consensus       163 ~d~~~~~~----------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~  214 (299)
T d1nr0a2         163 YKLSGASV----------------------------SEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL  214 (299)
T ss_dssp             EEEETTEE----------------------------EEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred             cccccccc----------------------------cccccccccccccccccccccccccccccccccccccccccccc
Confidence            87754221                            12234468899999999965 45889999999999999887655


Q ss_pred             EEE---ECC-eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcE
Q psy2107         310 SEI---VGN-KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSV  385 (391)
Q Consensus       310 ~~~---~~~-~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v  385 (391)
                      ...   ..| .+|.+++|+|++++|++|+.||.|++||++.............+...|.++.|.+ + .+|+|++.||+|
T Consensus       215 ~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-~~l~s~s~D~~i  292 (299)
T d1nr0a2         215 AHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLN-E-TTIVSAGQDSNI  292 (299)
T ss_dssp             SCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEE-T-TEEEEEETTSCE
T ss_pred             cccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECC-C-CEEEEEeCCCEE
Confidence            433   333 4899999999999999999999999999987654444433344556788887754 4 579999999999


Q ss_pred             EEEecC
Q psy2107         386 KLWDLR  391 (391)
Q Consensus       386 ~iwdlr  391 (391)
                      ++|||.
T Consensus       293 ~iWdl~  298 (299)
T d1nr0a2         293 KFWNVP  298 (299)
T ss_dssp             EEEECC
T ss_pred             EEEecc
Confidence            999983

>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Tup1, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.2e-34  Score=250.80  Aligned_cols=240  Identities=20%  Similarity=0.427  Sum_probs=192.9

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcC-CCceEEec------------------cCCCCCeeEEEEEecCCCCe
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTR-RGEHKLNI------------------PGHGGPVKGVAWLYNDGKDA  171 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~-~~~~~~~~------------------~~~~~~v~~l~~~~~~~~~~  171 (391)
                      ++|.+.|+|++|+  |++|++|+ |++|+|||+ ++..+..+                  ..|...|++++|   ++++.
T Consensus        59 ~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~---s~~~~  134 (388)
T d1erja_          59 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---SPDGK  134 (388)
T ss_dssp             EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEE---CTTSS
T ss_pred             CCCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEE---CCCCC
Confidence            4699999999998  66999886 899999998 44444433                  256778999999   77899


Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcc
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTT  251 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~  251 (391)
                      +|++|+.||.|++|+..    ....+....+|...|.++++++++..+++|+.++.+++||.++..              
T Consensus       135 ~l~s~~~dg~v~i~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~--------------  196 (388)
T d1erja_         135 FLATGAEDRLIRIWDIE----NRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ--------------  196 (388)
T ss_dssp             EEEEEETTSCEEEEETT----TTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------
T ss_pred             cceeccccccccccccc----ccccccccccccccccccccccccccccccccceeeeeeeccccc--------------
Confidence            99999999999999954    446777888999999999999999999999999999999997622              


Q ss_pred             ccccccccccCCCCCceeeecCccCcccEEEec-c-CCeEEEEECCCeEEEEecccCceeEEEEC--------CeeeEEE
Q psy2107         252 SKKRKKEYSSASSRTPLITLKGHKEAISAVQWT-A-VDEIITSSWDHTLKIWDAELGGMKSEIVG--------NKSFFDV  321 (391)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~i~~~  321 (391)
                                     .......+ ....++.+. + +..|++++.|+.|++||..++.....+..        ...|.++
T Consensus       197 ---------------~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l  260 (388)
T d1erja_         197 ---------------CSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV  260 (388)
T ss_dssp             ---------------EEEEEECS-SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred             ---------------cccccccc-cccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEE
Confidence                           33334434 344455555 3 45688999999999999999887776642        3479999


Q ss_pred             EECCCCCEEEEeeCCCcEEEEcCCCCCc---------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         322 HYSPLSKLVITASADKQIRLYDPKVKEG---------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       322 ~~~p~~~~l~~g~~dg~i~iwd~~~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+|++++|++|+.||.|++||++....         .........|...|++++|+| ++.+|++|+.||.|++||++
T Consensus       261 ~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~sg~~dg~i~vwd~~  338 (388)
T d1erja_         261 VFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKK  338 (388)
T ss_dssp             EECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETT
T ss_pred             EECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccccceEEEEEECC-CCCEEEEEeCCCEEEEEECC
Confidence            9999999999999999999999875432         123445667899999999999 66789999999999999974

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-34  Score=247.55  Aligned_cols=280  Identities=16%  Similarity=0.237  Sum_probs=203.4

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCC-CCcEEEEEec----CCEEEEEECCCeEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILH-DDWVSAIDFH----NDWILTGCYDHSVHI  140 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~~~~~----~~~l~t~~~dg~i~i  140 (391)
                      ....|.++|..++...         .....+..+.......+......+| ...|++++|+    +.+|++|+.||+|+|
T Consensus        21 t~l~~~~~~~~la~~~---------~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~i   91 (325)
T d1pgua1          21 THLSYDPTTNAIAYPC---------GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV   91 (325)
T ss_dssp             CCCEEETTTTEEEEEE---------TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred             EEEEECCCCCEEEEEe---------CCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEEE
Confidence            4467888886665310         0112233333323333334455666 5689999996    459999999999999


Q ss_pred             EcCCC-c--------eEEeccCCCCCeeEEEEEecCCCCeEEEEEeC--CCcEEEEeecCCCCceeEEEEEecCCCCeEE
Q psy2107         141 WTRRG-E--------HKLNIPGHGGPVKGVAWLYNDGKDAAFISVST--DQTAMIWEWKVESNSIECIHVCRGHERGLET  209 (391)
Q Consensus       141 wd~~~-~--------~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~  209 (391)
                      ||+.. .        ....+..|.++|.+++|   ++++.++++++.  ++.+++|+++    ...++..+.+|...|.+
T Consensus        92 Wd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---s~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~  164 (325)
T d1pgua1          92 WGWTFDKESNSVEVNVKSEFQVLAGPISDISW---DFEGRRLCVVGEGRDNFGVFISWD----SGNSLGEVSGHSQRINA  164 (325)
T ss_dssp             EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE---CTTSSEEEEEECCSSCSEEEEETT----TCCEEEECCSCSSCEEE
T ss_pred             eeecCCcceeeeecccccccccccCcEEEEEE---CCCCCccceeeccccceEEEEeec----ccccceeeeeccccccc
Confidence            99731 1        11234578999999999   778888887764  6789999865    34677888999999999


Q ss_pred             EEEcCCCCE-EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC--
Q psy2107         210 VTVSESRQQ-FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV--  286 (391)
Q Consensus       210 l~~~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--  286 (391)
                      ++|+|++.+ +++++.|+.+++||....+.                          .........|...|.+++|+|+  
T Consensus       165 ~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--------------------------~~~~~~~~~~~~~v~~v~~~pd~~  218 (325)
T d1pgua1         165 CHLKQSRPMRSMTVGDDGSVVFYQGPPFKF--------------------------SASDRTHHKQGSFVRDVEFSPDSG  218 (325)
T ss_dssp             EEECSSSSCEEEEEETTTEEEEEETTTBEE--------------------------EEEECSSSCTTCCEEEEEECSTTC
T ss_pred             ccccccccceEEEeeccccccccccccccc--------------------------ceecccccCCCCccEEeeeccccc
Confidence            999998865 67899999999999865332                          1122234567888999999964  


Q ss_pred             CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEEC---CCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-
Q psy2107         287 DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYS---PLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-  361 (391)
Q Consensus       287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~---p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-  361 (391)
                      ..+++++.|+.|++||+++++.+..+..+. ++..+.|+   |++++|++++.|+.|+|||+++++   ++..+..|.. 
T Consensus       219 ~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~---~~~~~~~~~~~  295 (325)
T d1pgua1         219 EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK---CVQKWTLDKQQ  295 (325)
T ss_dssp             CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTE---EEEEEECCTTC
T ss_pred             eeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCC---EEEEEEecCCc
Confidence            458889999999999999999998887654 44333333   679999999999999999998765   5555554443 


Q ss_pred             -cEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         362 -WVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       362 -~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       .+..+++.+.+..+|++++.||.|+||||
T Consensus       296 ~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl  325 (325)
T d1pgua1         296 LGNQQVGVVATGNGRIISLSLDGTLNFYEL  325 (325)
T ss_dssp             GGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred             ccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence             34444444433457999999999999997

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-33  Score=239.69  Aligned_cols=269  Identities=22%  Similarity=0.363  Sum_probs=180.1

Q ss_pred             CCcccCCCCcE-EEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         109 PLDCILHDDWV-SAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       109 ~~~~~~h~~~V-~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ...+.+|.+.| +|++++|++|+||+.||+|+|||+ +++.+..+.+|.+.|.+++|.   +  .+|++|+.|+.+++|+
T Consensus         9 ~~~l~GH~~~V~s~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~---~--~~l~s~s~D~~~~~~~   83 (342)
T d2ovrb2           9 PKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR---D--NIIISGSTDRTLKVWN   83 (342)
T ss_dssp             CEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE---T--TEEEEEETTSCEEEEE
T ss_pred             CEEECCcCCceEEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCCEEEEEeC---C--Cccccceecccccccc
Confidence            34567899987 578899999999999999999999 677888999999999999994   3  3899999999999998


Q ss_pred             ecCCCCc------------------------------------eeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy2107         187 WKVESNS------------------------------------IECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI  230 (391)
Q Consensus       187 ~~~~~~~------------------------------------~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i  230 (391)
                      .......                                    ......+..+..  ......+....+++++.|+.|++
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~  161 (342)
T d2ovrb2          84 AETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA--AVRCVQYDGRRVVSGAYDFMVKV  161 (342)
T ss_dssp             TTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSS--CEEEEEECSSCEEEEETTSCEEE
T ss_pred             cccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccc--cceeeccccceeeeecCCCeEEE
Confidence            4311000                                    000000000000  00111112223444444444444


Q ss_pred             EECCCCCCCCCCCCCCC-----------CCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEE
Q psy2107         231 WSADISKERGDPSENGD-----------EGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLK  299 (391)
Q Consensus       231 wd~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~  299 (391)
                      ||...............           ............++.....++..+.+|...+.++.+++ +.+++++.|+.|+
T Consensus       162 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~l~s~s~d~~i~  240 (342)
T d2ovrb2         162 WDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVK  240 (342)
T ss_dssp             EEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET-TEEEEEETTSCEE
T ss_pred             eecccceeeEEEcCcccccccccCCCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCC-CEEEEEcCCCEEE
Confidence            44443322111000000           00000011111222233557788889999999998876 6899999999999


Q ss_pred             EEecccCceeEEEECCe----eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe-----ccccCcEEEEEECC
Q psy2107         300 IWDAELGGMKSEIVGNK----SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF-----SSHKEWVQSVRWSP  370 (391)
Q Consensus       300 iwd~~~~~~~~~~~~~~----~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~~~~~~  370 (391)
                      +||+...+....+..+.    .+.++.++  ++++++|+.||.|++||+++++   ++..+     .+|...|++++|+|
T Consensus       241 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~s~s~Dg~i~iwd~~tg~---~i~~~~~~~~~~~~~~v~~v~~s~  315 (342)
T d2ovrb2         241 IWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE---FIRNLVTLESGGSGGVVWRIRASN  315 (342)
T ss_dssp             EEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC---EEEEEEECTTGGGTCEEEEEEECS
T ss_pred             EEecccccccccccccceeeeceeecccC--CCeeEEEcCCCEEEEEECCCCC---EEEEEecccCCCCCCCEEEEEECC
Confidence            99999988888776532    55666665  6799999999999999998876   44443     36788999999999


Q ss_pred             CCCCEEEEeeCCCc----EEEEecC
Q psy2107         371 IDPQLFVSASFDNS----VKLWDLR  391 (391)
Q Consensus       371 ~~~~~l~s~~~dg~----v~iwdlr  391 (391)
                       ++.++++|+.||+    |++||+.
T Consensus       316 -~~~~la~g~~dGt~~~~l~~~Df~  339 (342)
T d2ovrb2         316 -TKLVCAVGSRNGTEETKLLVLDFD  339 (342)
T ss_dssp             -SEEEEEEECSSSSSCCEEEEEECC
T ss_pred             -CCCEEEEEeCCCCCeeEEEEEeCC
Confidence             6778999999986    9999973

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-32  Score=238.55  Aligned_cols=264  Identities=22%  Similarity=0.342  Sum_probs=197.3

Q ss_pred             CCcccCCCCc-EEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         109 PLDCILHDDW-VSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       109 ~~~~~~h~~~-V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      ..++.||.+. |+|++|++++|+||+.||+|+|||+ +++.+..+.+|.++|++++|.   ++ .+|++|+.||+|++|+
T Consensus         5 ~~tL~GH~~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s---~~-~~l~s~s~D~~i~iw~   80 (355)
T d1nexb2           5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA---HG-GILVSGSTDRTVRVWD   80 (355)
T ss_dssp             EEEEECCSSSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEEE---TT-TEEEEEETTCCEEEEE
T ss_pred             cEEECCcCCCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCCEEEEEEc---CC-CEEEEEeccccccccc
Confidence            4557789887 5899999999999999999999999 677788999999999999994   33 4799999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +.  ............+........+.+++.++++++.|+.|++||+++.............      ............
T Consensus        81 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  152 (355)
T d1nexb2          81 IK--KGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY------PLVFHTPEENPY  152 (355)
T ss_dssp             TT--TTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----------CC------CEEESCTTTCTT
T ss_pred             cc--ccccccccccccccccccccccccccceeeeecCCCcEEEEEccCCceecccccccee------ccceeccccccc
Confidence            54  2222222222233344566778889999999999999999999875543221111000      000011111122


Q ss_pred             ceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         267 PLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      .......|...+..... .+..++++..|+.+++||+.+++.+.....+. .+.++.++|++.++++++.|+.|++||++
T Consensus       153 ~~~~~~~~~~~v~~~~~-~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~  231 (355)
T d1nexb2         153 FVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE  231 (355)
T ss_dssp             EEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred             eeeeeeecccccccccc-ccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeecc
Confidence            33344455555554443 34678999999999999999999888877554 78899999999999999999999999998


Q ss_pred             CCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ++.   ....+.+|...|++++|++   .+|++++.||.|++||++
T Consensus       232 ~~~---~~~~~~~h~~~v~~~~~~~---~~l~~~~~dg~i~iwd~~  271 (355)
T d1nexb2         232 NGE---LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDAN  271 (355)
T ss_dssp             TCC---EEEEECCCSSCCCEEEECS---SEEEEECTTSEEEEEETT
T ss_pred             ccc---ccccccccccccccccccc---ceeeeeeccccccccccc
Confidence            776   7788899999999999975   589999999999999974

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-32  Score=229.21  Aligned_cols=236  Identities=23%  Similarity=0.439  Sum_probs=190.8

Q ss_pred             cCCCCcEEEEEecCCEEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC
Q psy2107         113 ILHDDWVSAIDFHNDWILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       113 ~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      .+|...|+|++|++++||+|+.||+|+|||+ +++.+..+.+|.+.|++++|     ++++|++|+.||.|++|++....
T Consensus        12 ~~~~~~V~c~~~d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~-----~~~~l~s~s~D~~i~~~~~~~~~   86 (293)
T d1p22a2          12 SETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVNTGE   86 (293)
T ss_dssp             CSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESSSCC
T ss_pred             CCCCCCEEEEEEcCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEeeeec-----ccceeeccccccccccccccccc
Confidence            4688999999999999999999999999999 57778899999999999998     56799999999999999964211


Q ss_pred             ---------------------------------------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy2107         192 ---------------------------------------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWS  232 (391)
Q Consensus       192 ---------------------------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd  232 (391)
                                                             ........+..|...+.++.+.+  ..+++++.|+.|++||
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~d~~i~~~d  164 (293)
T d1p22a2          87 MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD--KYIVSASGDRTIKVWN  164 (293)
T ss_dssp             EEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET--TEEEEEETTSEEEEEE
T ss_pred             ccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecc--cccccccCCCceeeec
Confidence                                                   01112233345666777766654  4688999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEE
Q psy2107         233 ADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEI  312 (391)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~  312 (391)
                      .++                             .+.+..+.++...+..+.+++ ..+++++.|+.|++||+++...+...
T Consensus       165 ~~~-----------------------------~~~~~~~~~~~~~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~  214 (293)
T d1p22a2         165 TST-----------------------------CEFVRTLNGHKRGIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVL  214 (293)
T ss_dssp             TTT-----------------------------CCEEEEEECCSSCEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred             CCC-----------------------------CcEEEEEcccccccccccCCC-CeEEEecCCCEEEEEecccceeeeee
Confidence            976                             345677888888888888764 67999999999999999999998888


Q ss_pred             ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC------CcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         313 VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK------EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       313 ~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~------~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      ..+.... ..+++++.+|++|+.||.|++||+...      ........+.+|.+.|++++|++   .+|+|||.||+|+
T Consensus       215 ~~~~~~v-~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~---~~l~s~s~Dg~i~  290 (293)
T d1p22a2         215 EGHEELV-RCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE---FQIVSSSHDDTIL  290 (293)
T ss_dssp             CCCSSCE-EEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECS---SCEEECCSSSEEE
T ss_pred             cccceee-eeccccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcC---CEEEEEecCCEEE
Confidence            7766432 235667899999999999999996431      22346678899999999999964   4699999999999


Q ss_pred             EEe
Q psy2107         387 LWD  389 (391)
Q Consensus       387 iwd  389 (391)
                      |||
T Consensus       291 iWD  293 (293)
T d1p22a2         291 IWD  293 (293)
T ss_dssp             EEC
T ss_pred             EeC
Confidence            998

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=4.4e-32  Score=239.88  Aligned_cols=265  Identities=15%  Similarity=0.182  Sum_probs=188.3

Q ss_pred             ccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCC-------ceEEeccCCCCCeeEEEEE---ecC-CCCeEEEEEeCCC
Q psy2107         112 CILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRG-------EHKLNIPGHGGPVKGVAWL---YND-GKDAAFISVSTDQ  180 (391)
Q Consensus       112 ~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~-------~~~~~~~~~~~~v~~l~~~---~~~-~~~~~l~s~~~dg  180 (391)
                      ..+|.+.|.+++++++++++++.|++|+|||...       ........|...+..+...   +.+ .+..++++++.||
T Consensus        10 ~~~H~~~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg   89 (393)
T d1sq9a_          10 GKAHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG   89 (393)
T ss_dssp             SSCSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred             CCcccCccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCC
Confidence            3589999999999999999999999999999632       1233334455554433332   211 1345788999999


Q ss_pred             cEEEEeecCCCCceeEEEE-E-----ecCCCCeEEEEEcCC-----CCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC
Q psy2107         181 TAMIWEWKVESNSIECIHV-C-----RGHERGLETVTVSES-----RQQFATGGWDCLLKIWSADISKERGDPSENGDEG  249 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~-~-----~~~~~~v~~l~~~~~-----~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~  249 (391)
                      .|++|++............ .     ..+...+..++|.++     +.++++++.||.+++|++............... 
T Consensus        90 ~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~-  168 (393)
T d1sq9a_          90 DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS-  168 (393)
T ss_dssp             CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC-
T ss_pred             cEEEEEccCCCceeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeec-
Confidence            9999997644333222211 1     124456778888775     467899999999999998643211000000000 


Q ss_pred             ccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEEC-------CeeeEEEE
Q psy2107         250 TTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVG-------NKSFFDVH  322 (391)
Q Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-------~~~i~~~~  322 (391)
                                ..............+...+.+++|+|++.|++|+.|++|++||+.+++.+..+..       ..+|.+++
T Consensus       169 ----------~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~  238 (393)
T d1sq9a_         169 ----------PTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK  238 (393)
T ss_dssp             ----------CEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEE
T ss_pred             ----------cceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcc
Confidence                      0000001111223456678999999999999999999999999999988776653       34899999


Q ss_pred             ECCCCCEEEEeeCCCc---EEEEcCCCCCcceEEEE-------------eccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         323 YSPLSKLVITASADKQ---IRLYDPKVKEGAIVKST-------------FSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       323 ~~p~~~~l~~g~~dg~---i~iwd~~~~~~~~~~~~-------------~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      |+|+|++|++|+.|++   |++||++++.   .+..             +.+|.+.|++++|+| ++++|+|||.|++|+
T Consensus       239 ~spdg~~l~sgs~D~t~~~i~lwd~~~g~---~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fsp-d~~~l~S~s~D~~v~  314 (393)
T d1sq9a_         239 FSPQGSLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLR  314 (393)
T ss_dssp             ECSSTTEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBSBSSCEEEEEECS-SSSEEEEEETTSEEE
T ss_pred             cccccceeeeecCCCCcceeeecccccce---eeeeeccccccccceeeeecccCceeeeccCC-CCCeeEEECCCCEEE
Confidence            9999999999998874   9999998765   3333             348999999999999 667999999999999


Q ss_pred             EEecC
Q psy2107         387 LWDLR  391 (391)
Q Consensus       387 iwdlr  391 (391)
                      |||++
T Consensus       315 vWd~~  319 (393)
T d1sq9a_         315 FWDVK  319 (393)
T ss_dssp             EEETT
T ss_pred             EEECC
Confidence            99974

>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-31  Score=228.61  Aligned_cols=240  Identities=18%  Similarity=0.256  Sum_probs=188.5

Q ss_pred             cEEEEEec--CCEEEEEECCC-eEEEEcC---CCceEEeccCC-CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         118 WVSAIDFH--NDWILTGCYDH-SVHIWTR---RGEHKLNIPGH-GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg-~i~iwd~---~~~~~~~~~~~-~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      .+++++|+  ++.|+.++.+. .|+.|+.   .......+.+| ...|++++|+|. .++.+|++|+.||+|++||+...
T Consensus        19 ~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~~~~~~~~~gh~~~~v~~v~fsP~-~~g~~lasgs~Dg~i~iWd~~~~   97 (325)
T d1pgua1          19 FTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPI-KGSQYLCSGDESGKVIVWGWTFD   97 (325)
T ss_dssp             CCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSS-TTCCEEEEEETTSEEEEEEEEEE
T ss_pred             CeEEEEECCCCCEEEEEeCCCEEEEEEeCCCCCccceEEEeCCCCCCEEEEEEeeC-CCCCEEEEEeCCCCEEEeeecCC
Confidence            35677886  67888876654 4677775   23445667777 468999999662 36789999999999999997633


Q ss_pred             CCc----eeEEEEEecCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCC
Q psy2107         191 SNS----IECIHVCRGHERGLETVTVSESRQQFATGGW--DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASS  264 (391)
Q Consensus       191 ~~~----~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (391)
                      ...    ......+..|.++|.+++|+++++++++++.  ++.+++|+.++                             
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~-----------------------------  148 (325)
T d1pgua1          98 KESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS-----------------------------  148 (325)
T ss_dssp             GGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT-----------------------------
T ss_pred             cceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEEEEeecc-----------------------------
Confidence            222    1222345678999999999999999987764  67899999876                             


Q ss_pred             CCceeeecCccCcccEEEeccCC--eEEEEECCCeEEEEecccCceeEEEECC----eeeEEEEECCC-CCEEEEeeCCC
Q psy2107         265 RTPLITLKGHKEAISAVQWTAVD--EIITSSWDHTLKIWDAELGGMKSEIVGN----KSFFDVHYSPL-SKLVITASADK  337 (391)
Q Consensus       265 ~~~~~~~~~~~~~v~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~i~~~~~~p~-~~~l~~g~~dg  337 (391)
                      ...+..+.+|...|.+++|++.+  .+++++.|+.+++||....+.......+    ..|.+++|+|+ +.++++|+.|+
T Consensus       149 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~  228 (325)
T d1pgua1         149 GNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDR  228 (325)
T ss_dssp             CCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTC
T ss_pred             cccceeeeecccccccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceecccccccc
Confidence            34677788999999999999654  4788999999999999988877766542    36999999997 68999999999


Q ss_pred             cEEEEcCCCCCcceEEEEeccccCcEEEEEEC---CCCCCEEEEeeCCCcEEEEecC
Q psy2107         338 QIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS---PIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       338 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~---~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      .|++||+++++   .+..+.+|..++.++.|+   | ++.+|++++.|+.|+|||++
T Consensus       229 ~i~iwd~~~~~---~~~~l~~~~~~v~~~~~s~~~~-dg~~l~s~s~D~~i~iwd~~  281 (325)
T d1pgua1         229 KISCFDGKSGE---FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT  281 (325)
T ss_dssp             CEEEEETTTCC---EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred             ceeeeeecccc---ccccccccccccccceeeeecc-CCCEEEEEeCCCeEEEEECC
Confidence            99999998776   777888888776555554   4 45689999999999999974

>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Cdc4 propeller domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-31  Score=232.22  Aligned_cols=270  Identities=16%  Similarity=0.256  Sum_probs=200.5

Q ss_pred             eEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec-CCEEEEEECCCeEEEEcCCCce
Q psy2107          69 DFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH-NDWILTGCYDHSVHIWTRRGEH  147 (391)
Q Consensus        69 ~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~-~~~l~t~~~dg~i~iwd~~~~~  147 (391)
                      .+.++++++++          .+.++.+++|......  ....+.+|.++|++++|+ +++|++|+.||+|++|+.....
T Consensus        18 c~~~~~~~l~t----------gs~Dg~i~vWd~~~~~--~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~~~~~   85 (355)
T d1nexb2          18 CLQFEDNYVIT----------GADDKMIRVYDSINKK--FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGC   85 (355)
T ss_dssp             EEEEETTEEEE----------EETTTEEEEEETTTTE--EEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEETTTTE
T ss_pred             EEEECCCEEEE----------EeCCCeEEEEECCCCc--EEEEEECCCCCEEEEEEcCCCEEEEEecccccccccccccc
Confidence            34556777765          2467889999764322  234566799999999998 6699999999999999995443


Q ss_pred             E-EeccCCCCC--eeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCC---------------------------------
Q psy2107         148 K-LNIPGHGGP--VKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVES---------------------------------  191 (391)
Q Consensus       148 ~-~~~~~~~~~--v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~---------------------------------  191 (391)
                      . .....+...  .....+   .+++.++++++.|+.|++||+....                                 
T Consensus        86 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (355)
T d1nexb2          86 CTHVFEGHNSTVRCLDIVE---YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA  162 (355)
T ss_dssp             EEEEECCCSSCEEEEEEEE---ETTEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSS
T ss_pred             ccccccccccccccccccc---ccccceeeeecCCCcEEEEEccCCceeccccccceeccceeccccccceeeeeeeccc
Confidence            3 333333332  333344   4577888999999999999864211                                 


Q ss_pred             --------------------------CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         192 --------------------------NSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       192 --------------------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                                                ...+.+....++...+.++.++|++.++++++.|+.|++||.++          
T Consensus       163 ~v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~~----------  232 (355)
T d1nexb2         163 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN----------  232 (355)
T ss_dssp             CEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT----------
T ss_pred             cccccccccceeeeecccceeeeeecccccceeeeeccccccccccccccceeeecccccceEEeeeccc----------
Confidence                                      01122333445667788888999999999999999999999876          


Q ss_pred             CCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECC
Q psy2107         246 GDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSP  325 (391)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p  325 (391)
                                         ...+..+.+|...|.++++++ +.+++++.||.|++||++++................+++
T Consensus       233 -------------------~~~~~~~~~h~~~v~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  292 (355)
T d1nexb2         233 -------------------GELMYTLQGHTALVGLLRLSD-KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYV  292 (355)
T ss_dssp             -------------------CCEEEEECCCSSCCCEEEECS-SEEEEECTTSEEEEEETTTCCEEEEEECTTCCCCCEEEE
T ss_pred             -------------------ccccccccccccccccccccc-ceeeeeecccccccccccccceecccccCCceEEEEEcC
Confidence                               446778889999999999975 689999999999999999887766555444333455677


Q ss_pred             CCCEEEEeeCCCcEEEEcCCCCCcceEE-EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         326 LSKLVITASADKQIRLYDPKVKEGAIVK-STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       326 ~~~~l~~g~~dg~i~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ++.++++|+ |+.|++||+++++   ++ ..+.+|...|++++|+| + .++++++.||.++||.
T Consensus       293 ~~~~l~~g~-d~~i~vwd~~tg~---~~~~~~~~~~~~V~~v~~~~-~-~~~~~~s~dg~~~l~~  351 (355)
T d1nexb2         293 SDNILVSGS-ENQFNIYNLRSGK---LVHANILKDADQIWSVNFKG-K-TLVAAVEKDGQSFLEI  351 (355)
T ss_dssp             CSSEEEEEE-TTEEEEEETTTCC---BCCSCTTTTCSEEEEEEEET-T-EEEEEEESSSCEEEEE
T ss_pred             CCCEEEEEe-CCEEEEEECCCCC---EEEEEecCCCCCEEEEEEcC-C-eEEEEEECCCcEEEEE
Confidence            788777765 8999999998865   43 35678999999999998 4 4788999999976654

>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: beta1-subunit of the signal-transducing G protein heterotrimer
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.3e-30  Score=222.62  Aligned_cols=237  Identities=18%  Similarity=0.307  Sum_probs=180.6

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      ....++.+|.++|++++|   ++++.+|++|+.||+|++||+.    ....+..+..|...|.+++|+|+++++++|+.|
T Consensus        46 ~~~~tL~GH~~~I~~l~~---s~~~~~l~sgs~Dg~v~iWd~~----~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d  118 (340)
T d1tbga_          46 RTRRTLRGHLAKIYAMHW---GTDSRLLVSASQDGKLIIWDSY----TTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD  118 (340)
T ss_dssp             CEEEEECCCSSCEEEEEE---CTTSSEEEEEETTTEEEEEETT----TTEEEEEEECSCSCEEEEEECTTSSEEEEEETT
T ss_pred             eeeEEECCCCCCEEEEEE---CCCCCEEEEEECCCceeeeecc----cceeEEEEecccccEEeeEeeccceeeeeeccc
Confidence            345678899999999999   7789999999999999999954    446788889999999999999999999999999


Q ss_pred             CcEEEEECCCCCCCCCCCC--CCCCCcc--------------ccccccccccCCCCCceeeecCccCcccEEEecc-CCe
Q psy2107         226 CLLKIWSADISKERGDPSE--NGDEGTT--------------SKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDE  288 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~~~--~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~  288 (391)
                      +.+++|+............  .......              ......................+...+....+.+ ...
T Consensus       119 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (340)
T d1tbga_         119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL  198 (340)
T ss_dssp             CCEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred             ceeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeeccccccce
Confidence            9999999876543221100  0000000              0000000111122223334445666777777774 456


Q ss_pred             EEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         289 IITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      +++++.|+.|++||+++++++..+..+. .|.+++|+|++++|++|+.||.|++||++.... ........|...|++++
T Consensus       199 ~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~-~~~~~~~~~~~~i~~~~  277 (340)
T d1tbga_         199 FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE-LMTYSHDNIICGITSVS  277 (340)
T ss_dssp             EEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCEEEEE
T ss_pred             eEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeeccccc-ccccccccccCceEEEE
Confidence            8899999999999999999999988765 899999999999999999999999999986541 12223456778899999


Q ss_pred             ECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         368 WSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       368 ~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      |+| ++.+|++|+.||.|++||++
T Consensus       278 ~s~-~~~~l~~g~~dg~i~iwd~~  300 (340)
T d1tbga_         278 FSK-SGRLLLAGYDDFNCNVWDAL  300 (340)
T ss_dssp             ECS-SSCEEEEEETTSCEEEEETT
T ss_pred             ECC-CCCEEEEEECCCEEEEEECC
Confidence            999 66789999999999999974

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=8.1e-31  Score=221.49  Aligned_cols=254  Identities=15%  Similarity=0.173  Sum_probs=168.6

Q ss_pred             cccCCCCcEEEEEecCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         111 DCILHDDWVSAIDFHNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       111 ~~~~h~~~V~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      .+.+|.++|++++|++  |++|+.||+|++||+...    ...|...|.++++   ++ +..+++++.|+++++|++...
T Consensus         8 ~l~gH~~~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~----~~~h~~~V~~~~~---~~-~~~~~s~s~D~~v~~w~~~~~   77 (287)
T d1pgua2           8 TISGHNKGITALTVNP--LISGSYDGRIMEWSSSSM----HQDHSNLIVSLDN---SK-AQEYSSISWDDTLKVNGITKH   77 (287)
T ss_dssp             EECCCSSCEEEEETTT--TEEEETTSCEEETTTTEE----ECCCCSCEEEEEC---CS-TTCCEEEETTTEEEETTEEEE
T ss_pred             EECCCCCceEEEEECc--EEEEeCCCeEEEEECCCC----CCCCCCCEEEEEe---cC-CCeEEEEeecccccccccccc
Confidence            4568999999999987  999999999999998543    3579999999998   43 346899999999999986421


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCC---------c--ccccccccc
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEG---------T--TSKKRKKEY  259 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~  259 (391)
                      .           ....+.++++++++..++++ .++.+.+|+..++.............         .  .........
T Consensus        78 ~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~  145 (287)
T d1pgua2          78 E-----------FGSQPKVASANNDGFTAVLT-NDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQV  145 (287)
T ss_dssp             E-----------CSSCEEEEEECSSSEEEEEE-TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEE
T ss_pred             c-----------cccceeeeeeccCCceEEEe-ecccceeeeccceeeeeeccccceeeeeeccCcceeeeccccceeee
Confidence            1           12223334444433322222 22233344433332211110000000         0  000000000


Q ss_pred             ccCCCCCceee-ecCccCcccEEEeccCC-eEEEEECCCeEEEEecccCceeEE-EECC-eeeEEEEECCC---------
Q psy2107         260 SSASSRTPLIT-LKGHKEAISAVQWTAVD-EIITSSWDHTLKIWDAELGGMKSE-IVGN-KSFFDVHYSPL---------  326 (391)
Q Consensus       260 ~~~~~~~~~~~-~~~~~~~v~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~-~~~~-~~i~~~~~~p~---------  326 (391)
                      +.......... ...|...+++++|+|++ +|++|+.||.|++||+.++..... +..| .+|.+++|+|.         
T Consensus       146 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~  225 (287)
T d1pgua2         146 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEI  225 (287)
T ss_dssp             EETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CC
T ss_pred             eeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccC
Confidence            00011111222 23477889999999665 589999999999999998876543 3333 47999999874         


Q ss_pred             -CCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         327 -SKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       327 -~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                       +.++++|+.|+.|++||++...  .....+.+|...|++++|+| ++ .|+|++.||+|++||+
T Consensus       226 ~~~~l~sgs~D~~i~iw~~~~~~--~~~~~~~~h~~~V~~v~~~~-~~-~l~s~g~D~~v~iW~i  286 (287)
T d1pgua2         226 EEDLVATGSLDTNIFIYSVKRPM--KIIKALNAHKDGVNNLLWET-PS-TLVSSGADACIKRWNV  286 (287)
T ss_dssp             SCCEEEEEETTSCEEEEESSCTT--CCEEETTSSTTCEEEEEEEE-TT-EEEEEETTSCEEEEEE
T ss_pred             CCCeeEeecCCCeEEEEECCCCC--eEEEEeCCCCCCeEEEEECC-CC-EEEEEECCCeEEEEEE
Confidence             4689999999999999987532  35667889999999999999 54 5899999999999996

>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.97  E-value=7.4e-30  Score=216.81  Aligned_cols=233  Identities=16%  Similarity=0.209  Sum_probs=170.5

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE-ecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC-RGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      .....+.+|.++|++++|   ++++++|++|+.||+|++||++    ....+..+ .+|...|++++|+|+++ +++++.
T Consensus         3 ~~~~~~~GH~~~V~~l~~---s~dg~~l~s~s~Dg~v~vWd~~----~~~~~~~~~~~h~~~v~~v~~~~~g~-~~~~~~   74 (299)
T d1nr0a2           3 SIDQVRYGHNKAITALSS---SADGKTLFSADAEGHINSWDIS----TGISNRVFPDVHATMITGIKTTSKGD-LFTVSW   74 (299)
T ss_dssp             EEEEEECCCSSCEEEEEE---CTTSSEEEEEETTSCEEEEETT----TCCEEECSSCSCSSCEEEEEECTTSC-EEEEET
T ss_pred             ccceEcCCCCCCcEEEEE---CCCCCEEEEEcCCCeEEEEECC----CCcEEEEEcCCCCCcEEEEEeeccce-eecccc
Confidence            456678899999999999   7789999999999999999964    23445555 46899999999999997 566778


Q ss_pred             CCcEEEEECCCCCCCCCCCC---------------CCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-e
Q psy2107         225 DCLLKIWSADISKERGDPSE---------------NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-E  288 (391)
Q Consensus       225 dg~i~iwd~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~  288 (391)
                      |+.+++|+............               .+.............+.  ..+....  .....+.+++|++++ .
T Consensus        75 d~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~--~~~~~~~--~~~~~~~~~~~s~~~~~  150 (299)
T d1nr0a2          75 DDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYS--HGKLTEV--PISYNSSCVALSNDKQF  150 (299)
T ss_dssp             TTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEE--TTEEEEE--ECSSCEEEEEECTTSCE
T ss_pred             eeeEEEeccCCccccccccccccccccccccccccccccccccccccccccc--ccccccc--ccccccccccccccccc
Confidence            99999999865433211100               00000000000000000  0111111  134457889999654 5


Q ss_pred             EEEEECCCeEEEEecccCceeE--EEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEE
Q psy2107         289 IITSSWDHTLKIWDAELGGMKS--EIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSV  366 (391)
Q Consensus       289 l~s~~~dg~i~iwd~~~~~~~~--~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~  366 (391)
                      +++++.|+.|++||+++++...  ...+...|.+++|+|++++|++++.|+.|++||+...........+.+|...|+++
T Consensus       151 l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l  230 (299)
T d1nr0a2         151 VAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACV  230 (299)
T ss_dssp             EEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8899999999999998876543  34556689999999999999999999999999987655333445667899999999


Q ss_pred             EECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         367 RWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       367 ~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+| ++.+|++|+.||.|++||++
T Consensus       231 ~~s~-~~~~l~sgs~dg~i~iwd~~  254 (299)
T d1nr0a2         231 SWSP-DNVRLATGSLDNSVIVWNMN  254 (299)
T ss_dssp             EECT-TSSEEEEEETTSCEEEEETT
T ss_pred             cccc-cccceEEEcCCCEEEEEECC
Confidence            9999 66789999999999999974

>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Platelet-activating factor acetylhydrolase IB subunit alpha
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=5e-30  Score=218.73  Aligned_cols=241  Identities=20%  Similarity=0.383  Sum_probs=193.2

Q ss_pred             EEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEE
Q psy2107         140 IWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQF  219 (391)
Q Consensus       140 iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l  219 (391)
                      .|.........+.+|.++|++|+|   ++++.+|++|+.||+|++||+.    ..+.+..+.+|...|.+++|+|++.++
T Consensus         2 ~w~p~~~~~~~L~GH~~~I~~l~~---sp~~~~l~s~s~Dg~i~iWd~~----~~~~~~~~~~h~~~V~~~~~~~~~~~~   74 (317)
T d1vyhc1           2 EWIPRPPEKYALSGHRSPVTRVIF---HPVFSVMVSASEDATIKVWDYE----TGDFERTLKGHTDSVQDISFDHSGKLL   74 (317)
T ss_dssp             CCCCCSSCSCEEECCSSCEEEEEE---CSSSSEEEEEESSSCEEEEETT----TCCCCEEECCCSSCEEEEEECTTSSEE
T ss_pred             ccCCCCCccEEEcCCCCCeEEEEE---cCCCCEEEEEeCCCeEEEEECC----CCCEEEEEeCCCCcEEEEeeecccccc
Confidence            465555666678899999999999   7788999999999999999965    335667888999999999999999999


Q ss_pred             EEEeCCCcEEEEECCCCCCCCCCCCCCCC-------------CccccccccccccCCCCCceeeecCccCcccEEEeccC
Q psy2107         220 ATGGWDCLLKIWSADISKERGDPSENGDE-------------GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV  286 (391)
Q Consensus       220 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~  286 (391)
                      ++++.++.+.+|+................             ...........++.........+.+|...+.+++|+++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (317)
T d1vyhc1          75 ASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD  154 (317)
T ss_dssp             EEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred             cccccccccccccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccC
Confidence            99999999999998765543322111110             01111112223445566677888899999999999965


Q ss_pred             -CeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCC--------------------CEEEEeeCCCcEEEEcC
Q psy2107         287 -DEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLS--------------------KLVITASADKQIRLYDP  344 (391)
Q Consensus       287 -~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~--------------------~~l~~g~~dg~i~iwd~  344 (391)
                       ..+++++.|+.|++|++.+++....+..+. .+.+++++|++                    .++++|+.|+.|++||+
T Consensus       155 ~~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~  234 (317)
T d1vyhc1         155 GTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV  234 (317)
T ss_dssp             SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEET
T ss_pred             CCEEEEEeCCCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEEC
Confidence             558899999999999999999988887654 77888887653                    57899999999999999


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +++.   ++..+.+|...|++++|+| ++.+|++|+.||.|++||++
T Consensus       235 ~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~  277 (317)
T d1vyhc1         235 STGM---CLMTLVGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYK  277 (317)
T ss_dssp             TTTE---EEEEEECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCT
T ss_pred             CCCc---EEEEEeCCCCCEEEEEECC-CCCEEEEEECCCeEEEEECC
Confidence            8766   7788889999999999999 66789999999999999974

>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Antiviral protein Ski8 (Ski8p)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=4.9e-28  Score=213.64  Aligned_cols=272  Identities=13%  Similarity=0.195  Sum_probs=189.6

Q ss_pred             CccceEEEEEEeccCCCCCCc----ccCCCCcEEEEEe------c---CCEEEEEECCCeEEEEcCC-C---ceEE--e-
Q psy2107          91 SSENVIDVEYLESTPTPSPLD----CILHDDWVSAIDF------H---NDWILTGCYDHSVHIWTRR-G---EHKL--N-  150 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~----~~~h~~~V~~~~~------~---~~~l~t~~~dg~i~iwd~~-~---~~~~--~-  150 (391)
                      +.++.+++|.........+..    ...|...+..+..      +   ..++++++.||.|++|++. .   ....  . 
T Consensus        31 S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~~~~~~~  110 (393)
T d1sq9a_          31 SGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKL  110 (393)
T ss_dssp             ETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEE
T ss_pred             ECCCeEEEEECCCCCCCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCCcEEEEEccCCCceeeeecccc
Confidence            468899999865444332221    1235444433332      2   2378899999999999862 1   1111  1 


Q ss_pred             ----ccCCCCCeeEEEEEecC--CCCeEEEEEeCCCcEEEEeecCCCC-----------ceeE---EEEEecCCCCeEEE
Q psy2107         151 ----IPGHGGPVKGVAWLYND--GKDAAFISVSTDQTAMIWEWKVESN-----------SIEC---IHVCRGHERGLETV  210 (391)
Q Consensus       151 ----~~~~~~~v~~l~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~-----------~~~~---~~~~~~~~~~v~~l  210 (391)
                          ...+...+..++|.+..  ..+.++++++.||++++|++.....           ....   ......+...+.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  190 (393)
T d1sq9a_         111 DLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSV  190 (393)
T ss_dssp             CCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEE
T ss_pred             ceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEE
Confidence                12345667888886532  2357899999999999999753211           0111   11112345678999


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eE
Q psy2107         211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EI  289 (391)
Q Consensus       211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l  289 (391)
                      +|+|++ +|++|+.||.|++||+++++...                       .......+.+|..+|.+++|+|++ .|
T Consensus       191 ~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-----------------------~~~~~~~l~~h~~~V~~l~~spdg~~l  246 (393)
T d1sq9a_         191 DISERG-LIATGFNNGTVQISELSTLRPLY-----------------------NFESQHSMINNSNSIRSVKFSPQGSLL  246 (393)
T ss_dssp             EECTTS-EEEEECTTSEEEEEETTTTEEEE-----------------------EEECCC---CCCCCEEEEEECSSTTEE
T ss_pred             EECCCC-EEEEEeCCCcEEEEeeccccccc-----------------------ccccccccccccceEEEccccccccee
Confidence            999997 89999999999999998754321                       112334566899999999999765 58


Q ss_pred             EEEECCC---eEEEEecccCceeEEEE--------------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         290 ITSSWDH---TLKIWDAELGGMKSEIV--------------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       290 ~s~~~dg---~i~iwd~~~~~~~~~~~--------------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      ++|+.|+   .|++||+++++.+..+.              +...|++++|+|++++|++|+.|++|++||+++++   +
T Consensus       247 ~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~---~  323 (393)
T d1sq9a_         247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE---R  323 (393)
T ss_dssp             EEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE---E
T ss_pred             eeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCC---E
Confidence            8888886   49999999999888775              23479999999999999999999999999998876   7


Q ss_pred             EEEeccccCc---------------------EEEEEECCCC---------CCEEEEeeCCCcEEEEe
Q psy2107         353 KSTFSSHKEW---------------------VQSVRWSPID---------PQLFVSASFDNSVKLWD  389 (391)
Q Consensus       353 ~~~~~~h~~~---------------------v~~~~~~~~~---------~~~l~s~~~dg~v~iwd  389 (391)
                      +..+.+|...                     +.++.|.+.+         ...+++++.|+.|++|.
T Consensus       324 ~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~  390 (393)
T d1sq9a_         324 ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR  390 (393)
T ss_dssp             EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred             EEEECCcCCcccCCccEEEECCCCCEEEEcccceEEECccCceeccccCCCCEEEEEEcCCeEEEEe
Confidence            7888888643                     4566665421         23588899999999985

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.7e-28  Score=210.07  Aligned_cols=248  Identities=12%  Similarity=0.110  Sum_probs=174.6

Q ss_pred             cCCCCcEEEEEec--CCEEEEEECCCeEEEEcCC-Cc---eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEe
Q psy2107         113 ILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRR-GE---HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWE  186 (391)
Q Consensus       113 ~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~-~~---~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd  186 (391)
                      .+|++.|++|+|+  +++||+|+.||+|+|||+. ..   .+....+|.++|.+++|+|.  .+.+|++|+.||.|++|+
T Consensus         8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~--~~~~l~sg~~d~~v~~w~   85 (342)
T d1yfqa_           8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQGEILKVD   85 (342)
T ss_dssp             SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETTSCEEEEC
T ss_pred             CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCC--CCCEEEEcccccceeeee
Confidence            4699999999998  7799999999999999983 22   23344479999999999764  567899999999999999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      +....   ........+........+.++...+++++.|+.+++||++......                         .
T Consensus        86 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~-------------------------~  137 (342)
T d1yfqa_          86 LIGSP---SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGV-------------------------I  137 (342)
T ss_dssp             SSSSS---SEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBC-------------------------E
T ss_pred             ccccc---ccccccccccccccccccccccccccccccccccceeeccccccce-------------------------e
Confidence            65322   1222222334445566677788899999999999999986533211                         1


Q ss_pred             ceeeecCc--cCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEE----CCeeeEEEEE-CCCCCEEEEeeCCCc
Q psy2107         267 PLITLKGH--KEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIV----GNKSFFDVHY-SPLSKLVITASADKQ  338 (391)
Q Consensus       267 ~~~~~~~~--~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~i~~~~~-~p~~~~l~~g~~dg~  338 (391)
                      .......+  ........+. ....+++++.|+.|++||+..........    ......+..+ ..++..+++++.||.
T Consensus       138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~  217 (342)
T d1yfqa_         138 AVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR  217 (342)
T ss_dssp             EEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE
T ss_pred             eecccccccccceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeecCCCCEEEeecCCCe
Confidence            11112222  2223344455 45679999999999999998766433322    2224455454 446789999999999


Q ss_pred             EEEEcCCCCCcc------eEE------EEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGA------IVK------STFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~------~~~------~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+|+.......      ...      ....+|...|++++|+| ++.+|+||+.||.|++||++
T Consensus       218 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-~~~~lasg~~Dg~v~vWD~~  281 (342)
T d1yfqa_         218 VAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCWNLQ  281 (342)
T ss_dssp             EEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEEETT
T ss_pred             EEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecC-CccEEEEECCCCEEEEEECC
Confidence            999987643210      011      11235677899999999 55679999999999999974

>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: Cell cycle arrest protein BUB3
domain: Cell cycle arrest protein BUB3
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.9e-27  Score=203.54  Aligned_cols=281  Identities=12%  Similarity=0.081  Sum_probs=196.2

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCC-CCcccCCCCcEEEEEec---CCEEEEEECCCeEEEE
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPS-PLDCILHDDWVSAIDFH---NDWILTGCYDHSVHIW  141 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~V~~~~~~---~~~l~t~~~dg~i~iw  141 (391)
                      ...+|.+++++|++          .+.++.+++|......... .....+|.++|++++|+   +.+|++|+.||.|++|
T Consensus        15 ~~l~fsp~~~~L~s----------~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w   84 (342)
T d1yfqa_          15 SDIKIIPSKSLLLI----------TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV   84 (342)
T ss_dssp             EEEEEEGGGTEEEE----------EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred             EEEEEeCCCCEEEE----------EECCCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeee
Confidence            45799999988876          3468899999886543322 23445799999999997   3489999999999999


Q ss_pred             cCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC--CCCeEEEEEcCCCCE
Q psy2107         142 TRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH--ERGLETVTVSESRQQ  218 (391)
Q Consensus       142 d~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~  218 (391)
                      +.. .........+........+.+  ++...+++++.|+.+++||++..............+  ......+.+.+.+..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (342)
T d1yfqa_          85 DLIGSPSFQALTNNEANLGICRICK--YGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR  162 (342)
T ss_dssp             CSSSSSSEEECBSCCCCSCEEEEEE--ETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE
T ss_pred             ecccccccccccccccccccccccc--cccccccccccccccceeeccccccceeeecccccccccceeeeeeeeccCCc
Confidence            994 344444444444443333332  356789999999999999986544444444444433  234556677888899


Q ss_pred             EEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEec--cCCeEEEEECCC
Q psy2107         219 FATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWT--AVDEIITSSWDH  296 (391)
Q Consensus       219 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~s~~~dg  296 (391)
                      +++++.||.|++||+......                          ........+...+.+..+.  ....+++++.||
T Consensus       163 ~~~~~~d~~i~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg  216 (342)
T d1yfqa_         163 LIVGMNNSQVQWFRLPLCEDD--------------------------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDG  216 (342)
T ss_dssp             EEEEESTTEEEEEESSCCTTC--------------------------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTS
T ss_pred             eeeecCCCcEEEEecccCccc--------------------------ceeeeecccccceeeeEeecCCCCEEEeecCCC
Confidence            999999999999999764431                          1222333444555555555  345689999999


Q ss_pred             eEEEEecccCcee------EEEE----------CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecccc
Q psy2107         297 TLKIWDAELGGMK------SEIV----------GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHK  360 (391)
Q Consensus       297 ~i~iwd~~~~~~~------~~~~----------~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~  360 (391)
                      .+.+|+.......      ..+.          +...+.+++|+|++++|++|+.||.|++||+++++   .+..+..+ 
T Consensus       217 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~---~l~~~~~~-  292 (342)
T d1yfqa_         217 RVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK---KIKNFAKF-  292 (342)
T ss_dssp             EEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTE---EEEECCCC-
T ss_pred             eEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCCCEEEEEECCCCc---EEEEecCC-
Confidence            9999997643211      1111          11268899999999999999999999999998765   55555432 


Q ss_pred             CcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         361 EWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       361 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      ..+..++|+| ++.++++++.|+.+++|.
T Consensus       293 ~~~~~~~~s~-~~~~l~~a~sdd~~~~~~  320 (342)
T d1yfqa_         293 NEDSVVKIAC-SDNILCLATSDDTFKTNA  320 (342)
T ss_dssp             SSSEEEEEEE-CSSEEEEEEECTHHHHCS
T ss_pred             CCCEEEEEEe-CCCEEEEEEcCCcEEEee
Confidence            2345566777 556788888888777764

>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD repeat-containing protein 7, FBXW7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.4e-27  Score=204.28  Aligned_cols=230  Identities=20%  Similarity=0.361  Sum_probs=166.4

Q ss_pred             CceEEeccCCCCCeeE-EEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe
Q psy2107         145 GEHKLNIPGHGGPVKG-VAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGG  223 (391)
Q Consensus       145 ~~~~~~~~~~~~~v~~-l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~  223 (391)
                      .+....+.+|.+.|.+ +.|     ++++|++|+.||+|++||+.    ..+++..+.+|...|.+++|+|+  +|++|+
T Consensus         6 ~~~~~~l~GH~~~V~s~~~~-----~g~~l~sgs~Dg~i~vWd~~----~~~~~~~~~~h~~~V~~v~~~~~--~l~s~s   74 (342)
T d2ovrb2           6 LKSPKVLKGHDDHVITCLQF-----CGNRIVSGSDDNTLKVWSAV----TGKCLRTLVGHTGGVWSSQMRDN--IIISGS   74 (342)
T ss_dssp             CCCCEEEECSTTSCEEEEEE-----ETTEEEEEETTSCEEEEETT----TCCEEEECCCCSSCEEEEEEETT--EEEEEE
T ss_pred             CCcCEEECCcCCceEEEEEE-----CCCEEEEEeCCCeEEEEECC----CCCEEEEEeCCCCCEEEEEeCCC--ccccce
Confidence            3455678899998854 444     57799999999999999964    44678899999999999999875  899999


Q ss_pred             CCCcEEEEECCCCCCCCCCCCCCCC---------------------------------------------------Cccc
Q psy2107         224 WDCLLKIWSADISKERGDPSENGDE---------------------------------------------------GTTS  252 (391)
Q Consensus       224 ~dg~i~iwd~~~~~~~~~~~~~~~~---------------------------------------------------~~~~  252 (391)
                      .|+.+++|+................                                                   ....
T Consensus        75 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (342)
T d2ovrb2          75 TDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGA  154 (342)
T ss_dssp             TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEE
T ss_pred             ecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeec
Confidence            9999999998764432111000000                                                   0000


Q ss_pred             cccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEE
Q psy2107         253 KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVI  331 (391)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~  331 (391)
                      .......++......+..+.+|...+..+.+. +..+++++.||.|++||++.++.+..+..+. .+.+++++  +++|+
T Consensus       155 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~  231 (342)
T d2ovrb2         155 YDFMVKVWDPETETCLHTLQGHTNRVYSLQFD-GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILV  231 (342)
T ss_dssp             TTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEE
T ss_pred             CCCeEEEeecccceeeEEEcCcccccccccCC-CCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecC--CCEEE
Confidence            00000111223344455666676666666554 4679999999999999999999998888766 56666665  57999


Q ss_pred             EeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         332 TASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       332 ~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +|+.|+.|++||+...+..........|...+.++.+++   .++++|+.||+|++||++
T Consensus       232 s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~s~s~Dg~i~iwd~~  288 (342)
T d2ovrb2         232 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLK  288 (342)
T ss_dssp             EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETT
T ss_pred             EEcCCCEEEEEecccccccccccccceeeeceeecccCC---CeeEEEcCCCEEEEEECC
Confidence            999999999999987663333333445777888888865   589999999999999985

>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: F-box/WD-repeat protein 1 (beta-TRCP1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.5e-25  Score=188.51  Aligned_cols=224  Identities=24%  Similarity=0.433  Sum_probs=167.1

Q ss_pred             eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCC
Q psy2107         147 HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDC  226 (391)
Q Consensus       147 ~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg  226 (391)
                      ++.....|...|+|++|     ++++|++|+.||+|++||+.    ..+++..+.+|.+.|++++|  ++++|++|+.||
T Consensus         7 ~i~~~~~~~~~V~c~~~-----d~~~l~sgs~Dg~i~vWd~~----~~~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~   75 (293)
T d1p22a2           7 RIHCRSETSKGVYCLQY-----DDQKIVSGLRDNTIKIWDKN----TLECKRILTGHTGSVLCLQY--DERVIITGSSDS   75 (293)
T ss_dssp             CEECCCSSCCCEEEEEC-----CSSEEEEEESSSCEEEEESS----SCCEEEEECCCSSCEEEEEC--CSSEEEEEETTS
T ss_pred             EEeccCCCCCCEEEEEE-----cCCEEEEEeCCCeEEEEECC----CCcEEEEEecCCCCEeeeec--ccceeecccccc
Confidence            34455678889999876     67899999999999999964    45778899999999999987  567999999999


Q ss_pred             cEEEEECCCCCCCCCCCCCCCCC-----------ccccccccccccCC---CCCceeeecCccCcccEEEeccCCeEEEE
Q psy2107         227 LLKIWSADISKERGDPSENGDEG-----------TTSKKRKKEYSSAS---SRTPLITLKGHKEAISAVQWTAVDEIITS  292 (391)
Q Consensus       227 ~i~iwd~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~l~s~  292 (391)
                      .|++|++..+.............           ..........++..   .......+..|...+..+.+.+ ..++++
T Consensus        76 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~  154 (293)
T d1p22a2          76 TVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD-KYIVSA  154 (293)
T ss_dssp             CEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET-TEEEEE
T ss_pred             cccccccccccccccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecc-cccccc
Confidence            99999998765433221111100           00011111111111   1223344556777777777664 567889


Q ss_pred             ECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC
Q psy2107         293 SWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI  371 (391)
Q Consensus       293 ~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~  371 (391)
                      +.|+.+++||+++++.+..+..+. .+..+.++  +.++++++.||.|++||+++..   .+....+|...+..+.+   
T Consensus       155 s~d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~---  226 (293)
T d1p22a2         155 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA---CLRVLEGHEELVRCIRF---  226 (293)
T ss_dssp             ETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEC---
T ss_pred             cCCCceeeecCCCCcEEEEEcccccccccccCC--CCeEEEecCCCEEEEEecccce---eeeeecccceeeeeccc---
Confidence            999999999999999998888765 66666664  6789999999999999998766   67788889888887654   


Q ss_pred             CCCEEEEeeCCCcEEEEec
Q psy2107         372 DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdl  390 (391)
                      +..+|++++.||.|++||+
T Consensus       227 ~~~~l~sg~~dg~i~iwd~  245 (293)
T d1p22a2         227 DNKRIVSGAYDGKIKVWDL  245 (293)
T ss_dssp             CSSEEEEEETTSCEEEEEH
T ss_pred             cceEEEEEcCCCEEEEEEC
Confidence            4568999999999999996

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.95  E-value=3.1e-26  Score=199.19  Aligned_cols=266  Identities=13%  Similarity=0.053  Sum_probs=192.5

Q ss_pred             ceeeEEe-CCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCC--eEEE
Q psy2107          66 IQFDFLI-AGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDH--SVHI  140 (391)
Q Consensus        66 ~~~~f~~-~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg--~i~i  140 (391)
                      ...+|+| ||++++..           ..+.+.+|.....    .....+|...|.+++|+  |++|++++.+.  .|++
T Consensus         6 ~~~~fSP~dG~~~a~~-----------~~g~v~v~d~~~~----~~~~~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v   70 (360)
T d1k32a3           6 FAEDFSPLDGDLIAFV-----------SRGQAFIQDVSGT----YVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGI   70 (360)
T ss_dssp             GEEEEEECGGGCEEEE-----------ETTEEEEECTTSS----BEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEE
T ss_pred             hcccccCCCCCEEEEE-----------ECCeEEEEECCCC----cEEEccCCCCEEEEEECCCCCEEEEEEcCCCCEEEE
Confidence            3469999 89888752           3455666643221    22234799999999998  55777666553  7999


Q ss_pred             EcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE
Q psy2107         141 WTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA  220 (391)
Q Consensus       141 wd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~  220 (391)
                      ||..+.....+..|...|.+++|   ++++++|++++.++.+++|++.    .......+..|...+.+++|+|+|++|+
T Consensus        71 ~d~~~~~~~~~~~~~~~v~~~~~---spdg~~l~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~spdg~~la  143 (360)
T d1k32a3          71 YDYRTGKAEKFEENLGNVFAMGV---DRNGKFAVVANDRFEIMTVDLE----TGKPTVIERSREAMITDFTISDNSRFIA  143 (360)
T ss_dssp             EETTTCCEEECCCCCCSEEEEEE---CTTSSEEEEEETTSEEEEEETT----TCCEEEEEECSSSCCCCEEECTTSCEEE
T ss_pred             EECCCCcEEEeeCCCceEEeeee---cccccccceecccccccccccc----ccceeeeeecccccccchhhccceeeee
Confidence            99988888889999999999999   8899999999999999999954    3355667778899999999999999998


Q ss_pred             EEe----------CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCC-eE
Q psy2107         221 TGG----------WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EI  289 (391)
Q Consensus       221 sg~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l  289 (391)
                      .++          .++.+++||+.+++                              ...+..+...+..+.|++++ .|
T Consensus       144 ~~~~~~~~~~~~~~~~~~~v~d~~~~~------------------------------~~~~~~~~~~~~~~~~spdg~~l  193 (360)
T d1k32a3         144 YGFPLKHGETDGYVMQAIHVYDMEGRK------------------------------IFAATTENSHDYAPAFDADSKNL  193 (360)
T ss_dssp             EEEEECSSTTCSCCEEEEEEEETTTTE------------------------------EEECSCSSSBEEEEEECTTSCEE
T ss_pred             eeccccccceeeccccceeeeccccCc------------------------------eeeecccccccccccccCCCCEE
Confidence            654          34568999987532                              23344566778888999665 58


Q ss_pred             EEEECCCeEEEEecccCce-------eEEEECC-------------------------------------eeeEEEEECC
Q psy2107         290 ITSSWDHTLKIWDAELGGM-------KSEIVGN-------------------------------------KSFFDVHYSP  325 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~-------~~~~~~~-------------------------------------~~i~~~~~~p  325 (391)
                      ++++.++.+++||......       ...+..+                                     .....+...+
T Consensus       194 ~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (360)
T d1k32a3         194 YYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLE  273 (360)
T ss_dssp             EEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECS
T ss_pred             EEEeCCCceEcccccccceeeccccceEEEecccCccccceECCCcCcccccceeecccccceeecccCcCceeEeeecC
Confidence            8899999999998643321       1111100                                     0112222222


Q ss_pred             ----------CC---CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         326 ----------LS---KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       326 ----------~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                .+   .++++++.++.|++||+.+++   .    ..|.+.|.+++|+| +++.|++++.||.|++||+.
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~----~~~~~~v~~~~~Sp-DG~~l~~~~~Dg~i~v~d~~  344 (360)
T d1k32a3         274 SSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK---V----TEVKNNLTDLRLSA-DRKTVMVRKDDGKIYTFPLE  344 (360)
T ss_dssp             SEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC---E----EEEEEEEEEEEECT-TSCEEEEEETTSCEEEEESS
T ss_pred             CCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCe---E----EEecCCcCEEEECC-CCCEEEEEECCCeEEEEECC
Confidence                      22   245566678899999987754   2    12445699999999 66789999999999999974

>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: WD40 repeat-like
family: WD40-repeat
domain: Actin interacting protein 1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=5.7e-26  Score=191.43  Aligned_cols=225  Identities=16%  Similarity=0.264  Sum_probs=157.7

Q ss_pred             ceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC
Q psy2107         146 EHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD  225 (391)
Q Consensus       146 ~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d  225 (391)
                      +.+..+.+|.++|++++|   ++    |++|+.||+|++||+.  .       ...+|...|.++++++++ .+++++.|
T Consensus         4 ~~i~~l~gH~~~I~~l~~---s~----l~sgs~Dg~v~~Wd~~--~-------~~~~h~~~V~~~~~~~~~-~~~s~s~D   66 (287)
T d1pgua2           4 EVLKTISGHNKGITALTV---NP----LISGSYDGRIMEWSSS--S-------MHQDHSNLIVSLDNSKAQ-EYSSISWD   66 (287)
T ss_dssp             EEEEEECCCSSCEEEEET---TT----TEEEETTSCEEETTTT--E-------EECCCCSCEEEEECCSTT-CCEEEETT
T ss_pred             ceeEEECCCCCceEEEEE---Cc----EEEEeCCCeEEEEECC--C-------CCCCCCCCEEEEEecCCC-eEEEEeec
Confidence            466788999999999999   54    9999999999999953  1       235799999999999765 58999999


Q ss_pred             CcEEEEECCCCCCCCCC-----CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECC-CeEE
Q psy2107         226 CLLKIWSADISKERGDP-----SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWD-HTLK  299 (391)
Q Consensus       226 g~i~iwd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d-g~i~  299 (391)
                      +++++|++...+....+     .................+.......+..+.. ...+.++... +..+++++.+ +.++
T Consensus        67 ~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~v~~~~~~~v~  144 (287)
T d1pgua2          67 DTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL-NSPGSAVSLS-QNYVAVGLEEGNTIQ  144 (287)
T ss_dssp             TEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSCEEEEEEC-SSEEEEEETTTSCEE
T ss_pred             cccccccccccccccceeeeeeccCCceEEEeecccceeeeccceeeeeeccc-cceeeeeecc-Ccceeeeccccceee
Confidence            99999998654321111     0000000011111111222233333444332 2333333333 3456666665 5799


Q ss_pred             EEecccCceeEEEEC--CeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCC------
Q psy2107         300 IWDAELGGMKSEIVG--NKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPI------  371 (391)
Q Consensus       300 iwd~~~~~~~~~~~~--~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~------  371 (391)
                      +|++........+..  ...+.+++|+|++.+|++|+.||.|++||+....  .....+.+|...|++++|+|.      
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~--~~~~~~~~h~~~v~~~~~~p~~~~~~~  222 (287)
T d1pgua2         145 VFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--VKTSRWAFRTSKINAISWKPAEKGANE  222 (287)
T ss_dssp             EEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEECCSCCCSSCEEEEEECCCC-----
T ss_pred             eeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccc--cccccccccccccceeeeccccccccc
Confidence            999987666555543  3479999999999999999999999999987644  233456789999999999983      


Q ss_pred             ---CCCEEEEeeCCCcEEEEecC
Q psy2107         372 ---DPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       372 ---~~~~l~s~~~dg~v~iwdlr  391 (391)
                         ++.+++||+.|++|+|||++
T Consensus       223 ~~~~~~~l~sgs~D~~i~iw~~~  245 (287)
T d1pgua2         223 EEIEEDLVATGSLDTNIFIYSVK  245 (287)
T ss_dssp             -CCSCCEEEEEETTSCEEEEESS
T ss_pred             ccCCCCeeEeecCCCeEEEEECC
Confidence               34689999999999999974

>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Tricorn protease domain 2
family: Tricorn protease domain 2
domain: Tricorn protease domain 2
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.90  E-value=1.6e-22  Score=175.36  Aligned_cols=188  Identities=11%  Similarity=0.040  Sum_probs=152.3

Q ss_pred             EEEEe-cCCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCC--cEEEEeecCCCCceeE
Q psy2107         120 SAIDF-HNDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQ--TAMIWEWKVESNSIEC  196 (391)
Q Consensus       120 ~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg--~v~iwd~~~~~~~~~~  196 (391)
                      ...+. +|+++|+++ +|.|++||..+.....+ .|...|.+++|   +|+++.|++++.+.  .|++||+.  ..   .
T Consensus         8 ~~fSP~dG~~~a~~~-~g~v~v~d~~~~~~~~~-~~~~~v~~~~~---spDg~~l~~~~~~~g~~v~v~d~~--~~---~   77 (360)
T d1k32a3           8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV-PEPLRIRYVRR---GGDTKVAFIHGTREGDFLGIYDYR--TG---K   77 (360)
T ss_dssp             EEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC-SCCSCEEEEEE---CSSSEEEEEEEETTEEEEEEEETT--TC---C
T ss_pred             ccccCCCCCEEEEEE-CCeEEEEECCCCcEEEc-cCCCCEEEEEE---CCCCCEEEEEEcCCCCEEEEEECC--CC---c
Confidence            44454 477888876 57999999977777766 69999999999   78899888776553  78999954  22   2


Q ss_pred             EEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccC
Q psy2107         197 IHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKE  276 (391)
Q Consensus       197 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (391)
                      ...+..|...|.+++|+|++++|++++.++.+++|++.+                             ......+..|..
T Consensus        78 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~  128 (360)
T d1k32a3          78 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-----------------------------GKPTVIERSREA  128 (360)
T ss_dssp             EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-----------------------------CCEEEEEECSSS
T ss_pred             EEEeeCCCceEEeeeecccccccceeccccccccccccc-----------------------------cceeeeeecccc
Confidence            445678999999999999999999999999999999976                             335566778889


Q ss_pred             cccEEEeccCCe-EEEE----------ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCC
Q psy2107         277 AISAVQWTAVDE-IITS----------SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPK  345 (391)
Q Consensus       277 ~v~~~~~~~~~~-l~s~----------~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~  345 (391)
                      .+.+++|+|++. |+.+          ..++.+++||+.+++..........+..++|+|+|++|++++.++.+.+|+..
T Consensus       129 ~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~  208 (360)
T d1k32a3         129 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV  208 (360)
T ss_dssp             CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred             cccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEEeCCCceEccccc
Confidence            999999997765 4433          24557999999998877666667788899999999999999999999999864


Q ss_pred             C
Q psy2107         346 V  346 (391)
Q Consensus       346 ~  346 (391)
                      .
T Consensus       209 ~  209 (360)
T d1k32a3         209 V  209 (360)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.89  E-value=5.5e-22  Score=176.36  Aligned_cols=258  Identities=9%  Similarity=0.041  Sum_probs=162.4

Q ss_pred             EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE---ecC
Q psy2107         128 WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC---RGH  203 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~  203 (391)
                      ++++.+.||+|+|||+ +++.+..+..| ..+..++|   +|+|+++++++.||+|++||+...  .......+   .+|
T Consensus        34 ~~V~~~~dg~v~vwD~~t~~~~~~l~~g-~~~~~vaf---SPDGk~l~~~~~d~~v~vwd~~t~--~~~~~~~i~~~~~~  107 (426)
T d1hzua2          34 FSVTLRDAGQIALVDGDSKKIVKVIDTG-YAVHISRM---SASGRYLLVIGRDARIDMIDLWAK--EPTKVAEIKIGIEA  107 (426)
T ss_dssp             EEEEETTTTEEEEEETTTCSEEEEEECC-SSEEEEEE---CTTSCEEEEEETTSEEEEEETTSS--SCEEEEEEECCSEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEE---CCCCCEEEEEeCCCCEEEEEccCC--ceeEEEEEeCCCCC
Confidence            5677889999999999 56667777766 46899999   889999999999999999996533  33333333   356


Q ss_pred             CCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCCCCCCCCCC------------CCCC--Cccccccccc----------
Q psy2107         204 ERGLETVTVSESRQQFAT-GGWDCLLKIWSADISKERGDPSE------------NGDE--GTTSKKRKKE----------  258 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~------------~~~~--~~~~~~~~~~----------  258 (391)
                      ...+.+++|+|+|+++++ +..++.+++||..++........            ....  ..........          
T Consensus       108 ~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i  187 (426)
T d1hzua2         108 RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV  187 (426)
T ss_dssp             EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred             cceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeE
Confidence            666777888999998755 45889999999987654321100            0000  0000000000          


Q ss_pred             -cc-cCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEEecccCce--------------------------
Q psy2107         259 -YS-SASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIWDAELGGM--------------------------  308 (391)
Q Consensus       259 -~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iwd~~~~~~--------------------------  308 (391)
                       .. .............+...+..+.|++++. ++++ ..+..+.+++..+++.                          
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (426)
T d1hzua2         188 LLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPV  267 (426)
T ss_dssp             EEEECSSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEE
T ss_pred             EEEEeccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCce
Confidence             00 0011111122224455566777775443 3333 3344555665544333                          


Q ss_pred             ----------------------------eEEEECCe-eeEEEEECCCCCEEEE-------eeCCCcEEEEcCCCCCcceE
Q psy2107         309 ----------------------------KSEIVGNK-SFFDVHYSPLSKLVIT-------ASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       309 ----------------------------~~~~~~~~-~i~~~~~~p~~~~l~~-------g~~dg~i~iwd~~~~~~~~~  352 (391)
                                                  ...+..+. .+..++|+|++++|++       ++.+++|+|||+.+++....
T Consensus       268 ~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~  347 (426)
T d1hzua2         268 WSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQ  347 (426)
T ss_dssp             EEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCE
T ss_pred             EEeccCCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeE
Confidence                                        33333333 4678999999999995       45678999999987653222


Q ss_pred             EE------EeccccCcEEEEEECCCCCCEEEEe----eCCCcEEEEecC
Q psy2107         353 KS------TFSSHKEWVQSVRWSPIDPQLFVSA----SFDNSVKLWDLR  391 (391)
Q Consensus       353 ~~------~~~~h~~~v~~~~~~~~~~~~l~s~----~~dg~v~iwdlr  391 (391)
                      +.      .+..|...|.+++||||+.++++++    +.||.|+|||.+
T Consensus       348 ~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~  396 (426)
T d1hzua2         348 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK  396 (426)
T ss_dssp             EECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETT
T ss_pred             EeccchhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECC
Confidence            11      1234667799999999666566664    468889999964

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.87  E-value=7.5e-20  Score=154.27  Aligned_cols=249  Identities=10%  Similarity=0.114  Sum_probs=171.0

Q ss_pred             EEEEECCCeEEEEcCCC-ceEEeccCCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         129 ILTGCYDHSVHIWTRRG-EHKLNIPGHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       129 l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                      +++++.|++|.+||+.. +.+..+. ....+..++|   +++++++ ++++.++.|++||+.    ..+.+..+..+. .
T Consensus         5 yV~~~~~~~v~v~D~~t~~~~~~i~-~g~~p~~va~---spdG~~l~v~~~~~~~i~v~d~~----t~~~~~~~~~~~-~   75 (301)
T d1l0qa2           5 YIANSESDNISVIDVTSNKVTATIP-VGSNPMGAVI---SPDGTKVYVANAHSNDVSIIDTA----TNNVIATVPAGS-S   75 (301)
T ss_dssp             EEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEE---CTTSSEEEEEEGGGTEEEEEETT----TTEEEEEEECSS-S
T ss_pred             EEEECCCCEEEEEECCCCeEEEEEE-CCCCceEEEE---eCCCCEEEEEECCCCEEEEEECC----CCceeeeeeccc-c
Confidence            45677899999999954 4444444 4456789999   7888876 567789999999954    445677777665 5


Q ss_pred             eEEEEEcCCCCEEEE-EeCCCcEEEEECCCCCCCCCCCCCCCC-----------Cccc--cccccccccCCCCCceeeec
Q psy2107         207 LETVTVSESRQQFAT-GGWDCLLKIWSADISKERGDPSENGDE-----------GTTS--KKRKKEYSSASSRTPLITLK  272 (391)
Q Consensus       207 v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~~~~~~~~~-----------~~~~--~~~~~~~~~~~~~~~~~~~~  272 (391)
                      +..++|++++..+++ +..++.+.+|+..+++...........           ....  ..................+.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (301)
T d1l0qa2          76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS  155 (301)
T ss_dssp             EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred             ccccccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccceeeeeccccceeeecc
Confidence            689999999986654 556788999999876543322111100           0000  00111122223333333333


Q ss_pred             CccCcccEEEeccC-CeEEEEEC-CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEee---CCCcEEEEcCCCC
Q psy2107         273 GHKEAISAVQWTAV-DEIITSSW-DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITAS---ADKQIRLYDPKVK  347 (391)
Q Consensus       273 ~~~~~v~~~~~~~~-~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~---~dg~i~iwd~~~~  347 (391)
                       +...+..+.++++ ..+++++. ++.+.+|+............+..+..++++++++.++++.   .++.|++||+.+.
T Consensus       156 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~  234 (301)
T d1l0qa2         156 -VGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN  234 (301)
T ss_dssp             -CCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred             -cCCCceEEEeeccccceeeecccccccccccccceeeeecccccCCcceeeccccccccccccccceeeeeeeeecCCC
Confidence             3345678888854 44655554 5778889988888888888888889999999999876654   3468999999876


Q ss_pred             CcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         348 EGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       348 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +   +...+.. ...+.+++|+|++..++++++.|+.|++||+.
T Consensus       235 ~---~~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~  274 (301)
T d1l0qa2         235 K---ITARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTA  274 (301)
T ss_dssp             E---EEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred             e---EEEEEcC-CCCEEEEEEeCCCCEEEEEECCCCeEEEEECC
Confidence            5   5555554 35689999999665566888899999999974

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.85  E-value=6.1e-19  Score=150.97  Aligned_cols=221  Identities=13%  Similarity=0.086  Sum_probs=147.5

Q ss_pred             CEEEEEECCCeEEEEcCCC-ceEEecc--CCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEEEEEec
Q psy2107         127 DWILTGCYDHSVHIWTRRG-EHKLNIP--GHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECIHVCRG  202 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~~~-~~~~~~~--~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~~~~~  202 (391)
                      +++++++.|++|+|||+.. +.+..+.  .+...+.+++|   +++++++ ++++.++.|.+||+.    +.+.+..+..
T Consensus         2 ~~~vt~~~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~---spDg~~l~v~~~~~~~v~v~D~~----t~~~~~~~~~   74 (337)
T d1pbyb_           2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMV---APGGRIAYATVNKSESLVKIDLV----TGETLGRIDL   74 (337)
T ss_dssp             EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEE---CTTSSEEEEEETTTTEEEEEETT----TCCEEEEEEC
T ss_pred             eEEEEEcCCCEEEEEECCCCeEEEEEECCCCCCCccEEEE---CCCCCEEEEEECCCCeEEEEECC----CCcEEEEEec
Confidence            5899999999999999954 5555554  34566889999   7888876 567789999999965    3345555554


Q ss_pred             CC-----CCeEEEEEcCCCCEEEEEeC------------CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         203 HE-----RGLETVTVSESRQQFATGGW------------DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       203 ~~-----~~v~~l~~~~~~~~l~sg~~------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      +.     ..+..++|+|++++++++..            ++.+.+||..+...                           
T Consensus        75 ~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~---------------------------  127 (337)
T d1pbyb_          75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSR---------------------------  127 (337)
T ss_dssp             CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEE---------------------------
T ss_pred             CCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeE---------------------------
Confidence            43     24557899999999988763            56788888876442                           


Q ss_pred             CceeeecCccCcccEEEeccCCe-EEEEECC-------------------------------------------------
Q psy2107         266 TPLITLKGHKEAISAVQWTAVDE-IITSSWD-------------------------------------------------  295 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~~~~-l~s~~~d-------------------------------------------------  295 (391)
                        ...+. +...+..++|++++. +++++.+                                                 
T Consensus       128 --~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (337)
T d1pbyb_         128 --RKAFE-APRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYT  204 (337)
T ss_dssp             --EEEEE-CCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEE
T ss_pred             --EEecc-ccCCceEEEEcCCCCEEEEEcCCcceeeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeee
Confidence              22222 223344455554333 3333221                                                 


Q ss_pred             --------------CeEEEEecccCceeEEE--ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccc
Q psy2107         296 --------------HTLKIWDAELGGMKSEI--VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSH  359 (391)
Q Consensus       296 --------------g~i~iwd~~~~~~~~~~--~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h  359 (391)
                                    +.+.+||..++......  .....+..+.++|++.+++.+  ++.|++||+.+.+   .+..+. +
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~---~~~~~~-~  278 (337)
T d1pbyb_         205 ARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA---SIKRVP-L  278 (337)
T ss_dssp             EBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE---EEEEEE-C
T ss_pred             eeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCc---EEEEEc-C
Confidence                          22444444443332211  112245667788888888765  5889999998765   554543 5


Q ss_pred             cCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         360 KEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       360 ~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ...+.+++|+| ++.+|++++.||.|+|||++
T Consensus       279 ~~~~~~~~~s~-dG~~l~v~~~~~~i~v~D~~  309 (337)
T d1pbyb_         279 PHSYYSVNVST-DGSTVWLGGALGDLAAYDAE  309 (337)
T ss_dssp             SSCCCEEEECT-TSCEEEEESBSSEEEEEETT
T ss_pred             CCCEEEEEECC-CCCEEEEEeCCCcEEEEECC
Confidence            66789999999 55678889999999999974

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.82  E-value=2.6e-18  Score=147.58  Aligned_cols=255  Identities=8%  Similarity=-0.038  Sum_probs=164.3

Q ss_pred             Eec--CCEEEEEECCCeEEEEcCCC-ceEEecc-CCCCCeeEEEEEecCCCCeEE-EEEeCCCcEEEEeecCCCCceeEE
Q psy2107         123 DFH--NDWILTGCYDHSVHIWTRRG-EHKLNIP-GHGGPVKGVAWLYNDGKDAAF-ISVSTDQTAMIWEWKVESNSIECI  197 (391)
Q Consensus       123 ~~~--~~~l~t~~~dg~i~iwd~~~-~~~~~~~-~~~~~v~~l~~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~  197 (391)
                      +|+  ++++++++.|++|.+||+.. +.+.++. .|...+.+++|   +|+++++ +++..++.|.+||+.    ..+.+
T Consensus         3 a~~~~~~~l~~~~~~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~---spDG~~l~v~~~~~~~v~~~d~~----t~~~~   75 (346)
T d1jmxb_           3 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMM---APDNRTAYVLNNHYGDIYGIDLD----TCKNT   75 (346)
T ss_dssp             CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEE---CTTSSEEEEEETTTTEEEEEETT----TTEEE
T ss_pred             cCCCCCcEEEEEcCCCEEEEEECCCCCEEEEEEcCCCCCcceEEE---CCCCCEEEEEECCCCcEEEEeCc----cCeee
Confidence            454  67999999999999999954 4445554 45667889999   7788876 566688999999964    33444


Q ss_pred             EEEecCC------CCeEEEEEcCCCCEEEEEe------------CCCcEEEEECCCCCCCCCCCC----CCCCCcccccc
Q psy2107         198 HVCRGHE------RGLETVTVSESRQQFATGG------------WDCLLKIWSADISKERGDPSE----NGDEGTTSKKR  255 (391)
Q Consensus       198 ~~~~~~~------~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~~~  255 (391)
                      ..+....      ..+..++|+|+|+++++++            .++.+.+|+..+++.......    ...........
T Consensus        76 ~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (346)
T d1jmxb_          76 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADD  155 (346)
T ss_dssp             EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTT
T ss_pred             eeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCC
Confidence            4443221      2456899999999988765            467899999887665432211    00000000000


Q ss_pred             --------ccccccCCCCCceeeecCccCcccEEEeccCCe---------------------------EEEEECCCeEEE
Q psy2107         256 --------KKEYSSASSRTPLITLKGHKEAISAVQWTAVDE---------------------------IITSSWDHTLKI  300 (391)
Q Consensus       256 --------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------------------------l~s~~~dg~i~i  300 (391)
                              ....+...+......+..+.. ...+.+++++.                           +.++..++.+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (346)
T d1jmxb_         156 GSLYVAGPDIYKMDVKTGKYTVALPLRNW-NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS  234 (346)
T ss_dssp             SCEEEESSSEEEECTTTCCEEEEECSTTC-CCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred             CEEEEeCCcceEEEccCCCEEEEEecCCC-ccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeEeeccCCceEEE
Confidence                    011122234444445544433 22333332211                           122344566888


Q ss_pred             EecccCceeEEEE--CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEE
Q psy2107         301 WDAELGGMKSEIV--GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVS  378 (391)
Q Consensus       301 wd~~~~~~~~~~~--~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s  378 (391)
                      ||+.++.......  ....+..+.+++++.+++.+. ++.|.+||..+++   .+..+. +...+.+++|+| ++.+|++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~~---~~~~~~-~~~~~~~va~s~-DG~~l~v  308 (346)
T d1jmxb_         235 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRK---LIKAAN-LDHTYYCVAFDK-KGDKLYL  308 (346)
T ss_dssp             EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTE---EEEEEE-CSSCCCEEEECS-SSSCEEE
T ss_pred             EECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEEEEECCCCc---EEEEEc-CCCCEEEEEEcC-CCCEEEE
Confidence            8888877655432  344778889999988888765 5679999988765   444443 445799999999 4556888


Q ss_pred             eeCCCcEEEEecC
Q psy2107         379 ASFDNSVKLWDLR  391 (391)
Q Consensus       379 ~~~dg~v~iwdlr  391 (391)
                      ++.||.|+|||++
T Consensus       309 ~~~d~~v~v~D~~  321 (346)
T d1jmxb_         309 GGTFNDLAVFNPD  321 (346)
T ss_dssp             ESBSSEEEEEETT
T ss_pred             EeCCCcEEEEECc
Confidence            8999999999974

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.82  E-value=1.4e-18  Score=154.05  Aligned_cols=187  Identities=11%  Similarity=0.020  Sum_probs=136.8

Q ss_pred             EEEEEECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCce-eEEEEEecCCC
Q psy2107         128 WILTGCYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSI-ECIHVCRGHER  205 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~  205 (391)
                      ++++.+.||+|.|||. +++.+..+..+ ..+..++|   +|+|+++++++.||++++||+....... ..+....+|.+
T Consensus        34 ~~v~~~d~g~v~v~D~~t~~v~~~~~~g-~~~~~v~f---SpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~~~~~~~~  109 (432)
T d1qksa2          34 FSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRL---SASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARS  109 (432)
T ss_dssp             EEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEE---CTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEE
T ss_pred             EEEEEcCCCEEEEEECCCCcEEEEEeCC-CCeeEEEE---CCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEecCCCCCC
Confidence            4688999999999999 55666677655 56999999   8899999999999999999975433211 12233335566


Q ss_pred             CeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecC-----------
Q psy2107         206 GLETVTVSESRQQF-ATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG-----------  273 (391)
Q Consensus       206 ~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  273 (391)
                      .+.+.+|+|||++| ++++.++.|++||..+++.                             +..+..           
T Consensus       110 ~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~-----------------------------~~~~~~~~~~~~~~~~~  160 (432)
T d1qksa2         110 IETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-----------------------------KKIQSTRGMTYDEQEYH  160 (432)
T ss_dssp             EEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-----------------------------EEEEECCEECTTTCCEE
T ss_pred             eEEecccCCCCCEEEEEcCCCCeEEEEeCccccc-----------------------------eeeeccCCccccceecc
Confidence            67777788999976 6788899999999987543                             222222           


Q ss_pred             ccCcccEEEeccCC-e-EEEEECCCeEEEEecccCcee--EEEECCeeeEEEEECCCCCEEEEeeC-CCcEEEEcCCCC
Q psy2107         274 HKEAISAVQWTAVD-E-IITSSWDHTLKIWDAELGGMK--SEIVGNKSFFDVHYSPLSKLVITASA-DKQIRLYDPKVK  347 (391)
Q Consensus       274 ~~~~v~~~~~~~~~-~-l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~i~~~~~~p~~~~l~~g~~-dg~i~iwd~~~~  347 (391)
                      +......+.+++++ . +++...++.|.+||..+++..  ..+.....+..++|+|+|+++++++. ++.+.++|....
T Consensus       161 ~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~  239 (432)
T d1qksa2         161 PEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG  239 (432)
T ss_dssp             SCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred             CCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeecccc
Confidence            33445567778554 3 456677899999999887754  44555567889999999998777664 567888887653

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=2.8e-17  Score=140.36  Aligned_cols=271  Identities=7%  Similarity=0.079  Sum_probs=175.5

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEE-CCCeEEEEcCCC-c---eEEeccCCCCCeeEEEEE
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGC-YDHSVHIWTRRG-E---HKLNIPGHGGPVKGVAWL  164 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~-~dg~i~iwd~~~-~---~~~~~~~~~~~v~~l~~~  164 (391)
                      .++.+.+|...............|.+.|.+|+|+  |++|++++ .|+.|++|++.. .   .......+...+..++| 
T Consensus        12 ~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~-   90 (333)
T d1ri6a_          12 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIST-   90 (333)
T ss_dssp             GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEE-
T ss_pred             CCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEE-
Confidence            5677888877543333334556788999999998  56775554 589999999832 2   22222345566778999 


Q ss_pred             ecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCC
Q psy2107         165 YNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDP  242 (391)
Q Consensus       165 ~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~  242 (391)
                        +++++++++++. ++.+.+|+..  ............+...+.++.++|+++++++++. +..|.+|+........  
T Consensus        91 --spDg~~l~v~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~--  164 (333)
T d1ri6a_          91 --DHQGQFVFVGSYNAGNVSVTRLE--DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV--  164 (333)
T ss_dssp             --CTTSSEEEEEETTTTEEEEEEEE--TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEE--
T ss_pred             --cCCCCEEeecccCCCceeeeccc--cccceecccccCCCccceEEEeeecceeeeccccccceeeEEEeccCCcce--
Confidence              888998888875 6788999854  3333444455567778899999999998888775 4568999986533210  


Q ss_pred             CCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe-EE-EEECCCeEEEEecccCce----eEEEE---
Q psy2107         243 SENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-II-TSSWDHTLKIWDAELGGM----KSEIV---  313 (391)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~-s~~~dg~i~iwd~~~~~~----~~~~~---  313 (391)
                                           .................++|++++. ++ +....+...+|+......    .....   
T Consensus       165 ---------------------~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~  223 (333)
T d1ri6a_         165 ---------------------AQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMP  223 (333)
T ss_dssp             ---------------------EEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred             ---------------------eeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeecccccceeeeeeeeeee
Confidence                                 0000011112334457888986554 33 344567788887654321    11221   


Q ss_pred             ----CCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         314 ----GNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       314 ----~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                          .......+++++++++++.. ..++.+.+|++..............+...+.+++|+|++..+++++..++.|++|
T Consensus       224 ~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~  303 (333)
T d1ri6a_         224 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVY  303 (333)
T ss_dssp             TTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred             cCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCCCCCeeEEEEeCCCCEEEEEECCCCeEEEE
Confidence                11245678899999866654 5678899998876544333333344556688999999665555666677999999


Q ss_pred             ec
Q psy2107         389 DL  390 (391)
Q Consensus       389 dl  390 (391)
                      ++
T Consensus       304 ~i  305 (333)
T d1ri6a_         304 EI  305 (333)
T ss_dssp             EE
T ss_pred             EE
Confidence            64

>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.79  E-value=3.5e-18  Score=146.15  Aligned_cols=246  Identities=10%  Similarity=0.001  Sum_probs=158.4

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEE-EEEECCCeEEEEcC-CCceEEeccCCC-----CCeeEEE
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTR-RGEHKLNIPGHG-----GPVKGVA  162 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~-~~~~~~~~~~~~-----~~v~~l~  162 (391)
                      .++.+.+|+.........+....+...+.+++|+  |+++ ++++.++.|.+||+ +++.+..+..+.     ..+..++
T Consensus         9 ~d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~v~   88 (337)
T d1pbyb_           9 RPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA   88 (337)
T ss_dssp             TTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred             CCCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEecCCCcccccceeeEE
Confidence            3456666665433222222223344567788887  5665 56778999999999 555555554433     3455788


Q ss_pred             EEecCCCCeEEEEEe------------CCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy2107         163 WLYNDGKDAAFISVS------------TDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKI  230 (391)
Q Consensus       163 ~~~~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i  230 (391)
                      |   ++++.+++++.            .++.+.+||..    .......+.. ...+.+++|+|+++++++++.+  +.+
T Consensus        89 ~---s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~--~~~  158 (337)
T d1pbyb_          89 L---SPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE----TLSRRKAFEA-PRQITMLAWARDGSKLYGLGRD--LHV  158 (337)
T ss_dssp             E---CTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT----TTEEEEEEEC-CSSCCCEEECTTSSCEEEESSS--EEE
T ss_pred             E---cCCCcEEEEeecCCcceeeeccccccceeecccc----CCeEEEeccc-cCCceEEEEcCCCCEEEEEcCC--cce
Confidence            9   77888887776            35677888843    3345555553 4568899999999999998754  778


Q ss_pred             EECCCCCCCCCCCC-----------CCCCCcccccc-------------------------ccccccCCCCCc-eeeecC
Q psy2107         231 WSADISKERGDPSE-----------NGDEGTTSKKR-------------------------KKEYSSASSRTP-LITLKG  273 (391)
Q Consensus       231 wd~~~~~~~~~~~~-----------~~~~~~~~~~~-------------------------~~~~~~~~~~~~-~~~~~~  273 (391)
                      ||..+++.......           ...........                         ............ ...+..
T Consensus       159 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (337)
T d1pbyb_         159 MDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI  238 (337)
T ss_dssp             EETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred             eeeecCcEEEEeecCCccccceecCCcceeeccccccceeeeeeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecC
Confidence            99877653221100           00000000000                         000001111111 112334


Q ss_pred             ccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         274 HKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       274 ~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      +...+..+.+++++..+.+. ++.+++||+.+++.+..+.....+.+++|+|+|++|++++.++.|++||..+.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~-~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~  312 (337)
T d1pbyb_         239 MDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE  312 (337)
T ss_dssp             CSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred             CCcceEEEEecccceEEEEc-cccEEEEECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence            55566677777665544433 689999999999999999988889999999999999999999999999998876

>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.79  E-value=5.1e-18  Score=150.46  Aligned_cols=261  Identities=10%  Similarity=0.011  Sum_probs=164.9

Q ss_pred             CccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEEEEEECCCeEEEEcCCCce-E--Eec---cCCCCCeeEEE
Q psy2107          91 SSENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWILTGCYDHSVHIWTRRGEH-K--LNI---PGHGGPVKGVA  162 (391)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~-~--~~~---~~~~~~v~~l~  162 (391)
                      +.++.+.+|+.....   .+..+.+...+..++|+  |+++++++.||+|++||+.+.. .  ..+   .+|.+.+.+++
T Consensus        39 ~~dg~v~vwD~~t~~---~~~~l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~  115 (426)
T d1hzua2          39 RDAGQIALVDGDSKK---IVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKF  115 (426)
T ss_dssp             TTTTEEEEEETTTCS---EEEEEECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCS
T ss_pred             cCCCEEEEEECCCCc---EEEEEeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEeCCCCCcceEEeee
Confidence            467888999764332   22222333568999998  7799999999999999994332 2  222   24555566666


Q ss_pred             EEecCCCCeEE-EEEeCCCcEEEEeecCCCCc------------------eeE---------------------------
Q psy2107         163 WLYNDGKDAAF-ISVSTDQTAMIWEWKVESNS------------------IEC---------------------------  196 (391)
Q Consensus       163 ~~~~~~~~~~l-~s~~~dg~v~iwd~~~~~~~------------------~~~---------------------------  196 (391)
                      |   +++++++ +++..++.+++||.......                  ...                           
T Consensus       116 ~---spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~  192 (426)
T d1hzua2         116 K---GYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNY  192 (426)
T ss_dssp             T---TCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEEC
T ss_pred             e---cCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEe
Confidence            6   6788876 45558899999984321000                  000                           


Q ss_pred             ------EEEEecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCC--c----------------c
Q psy2107         197 ------IHVCRGHERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEG--T----------------T  251 (391)
Q Consensus       197 ------~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~--~----------------~  251 (391)
                            ......+...+..++|+|++++++++. .+..+.+++..+.+............  .                .
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (426)
T d1hzua2         193 KDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSH  272 (426)
T ss_dssp             SSSSSCEEEEEECCSSEEEEEECTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEEC
T ss_pred             ccccceeeEEeccCCccEeeeECCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEecc
Confidence                  001112344566788899888877765 45668888887665432111000000  0                0


Q ss_pred             ccccccc-------cccCCCCCceeeecCccCcccEEEeccCCeEEE--------EECCCeEEEEecccCceeEEEE---
Q psy2107         252 SKKRKKE-------YSSASSRTPLITLKGHKEAISAVQWTAVDEIIT--------SSWDHTLKIWDAELGGMKSEIV---  313 (391)
Q Consensus       252 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s--------~~~dg~i~iwd~~~~~~~~~~~---  313 (391)
                      .......       .......+....+.+|...+..++|+|++..+.        ++.|++|++||+++++...++.   
T Consensus       273 ~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~  352 (426)
T d1hzua2         273 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIA  352 (426)
T ss_dssp             TTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHH
T ss_pred             CCCceEEEeeccccccccccceEeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccc
Confidence            0000000       011123356678889999999999998776443        3457899999999998776653   


Q ss_pred             -------CCeeeEEEEECCCCCEEEEe-----eCCCcEEEEcCCCCCcceEEEEecccc
Q psy2107         314 -------GNKSFFDVHYSPLSKLVITA-----SADKQIRLYDPKVKEGAIVKSTFSSHK  360 (391)
Q Consensus       314 -------~~~~i~~~~~~p~~~~l~~g-----~~dg~i~iwd~~~~~~~~~~~~~~~h~  360 (391)
                             +...+..++|+|||++++.+     +.++.|+|||.++.+   +...+.++.
T Consensus       353 ~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k---~~~~i~~~~  408 (426)
T d1hzua2         353 EWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK---LKAVVKDPR  408 (426)
T ss_dssp             HHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTE---EEEEECCTT
T ss_pred             hhcccCCCCccEEEEEECCCCCEEEEEEecCCCCCCeEEEEECCCCe---EEEEECCCC
Confidence                   23368899999999977432     357889999998876   666666554

>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.77  E-value=1.7e-17  Score=146.86  Aligned_cols=192  Identities=10%  Similarity=0.023  Sum_probs=140.4

Q ss_pred             CCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCC
Q psy2107         169 KDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDE  248 (391)
Q Consensus       169 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~  248 (391)
                      ...++++.+.||+|.+||..    ..+++..+..+ ..+..++|+|||+++++++.||.+++||+.+++...        
T Consensus        31 ~~~~~v~~~d~g~v~v~D~~----t~~v~~~~~~g-~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~--------   97 (432)
T d1qksa2          31 ENLFSVTLRDAGQIALIDGS----TYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTT--------   97 (432)
T ss_dssp             GGEEEEEETTTTEEEEEETT----TCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCE--------
T ss_pred             CcEEEEEEcCCCEEEEEECC----CCcEEEEEeCC-CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceE--------
Confidence            33456899999999999954    55677888776 469999999999999999999999999998744210        


Q ss_pred             CccccccccccccCCCCCceeeecCccCcccEEEeccCCe-E-EEEECCCeEEEEecccCceeEEEECCe----------
Q psy2107         249 GTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAELGGMKSEIVGNK----------  316 (391)
Q Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l-~s~~~dg~i~iwd~~~~~~~~~~~~~~----------  316 (391)
                                      ...+.....|...+.+..|+|++. + ++++.++.|++||..+++++..+..+.          
T Consensus        98 ----------------~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~  161 (432)
T d1qksa2          98 ----------------VAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHP  161 (432)
T ss_dssp             ----------------EEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEES
T ss_pred             ----------------EEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccC
Confidence                            011222334556666667776664 4 677889999999999999988876532          


Q ss_pred             --eeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         317 --SFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       317 --~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                        ....+.++|+|..+ ++...++.|.+||....+.... ..+ .+...+..++|+|++..+++++..++.+.+||.+
T Consensus       162 ~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~-~~i-~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~  237 (432)
T d1qksa2         162 EPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKT-TEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTK  237 (432)
T ss_dssp             CCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEE-EEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred             CCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceE-EEE-cccCccccceECCCCCEEEEeccccceEEEeecc
Confidence              35678899998865 4566789999999876542222 222 3556789999999665555666666788888763

>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: YVTN repeat
domain: Surface layer protein
species: Archaeon Methanosarcina mazei [TaxId: 2209]

Probab=99.76  E-value=2.1e-16  Score=132.71  Aligned_cols=250  Identities=12%  Similarity=0.082  Sum_probs=158.6

Q ss_pred             ccceEEEEEEeccCCCCCCcccCCCCcEEEEEec--CCEE-EEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecC
Q psy2107          92 SENVIDVEYLESTPTPSPLDCILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYND  167 (391)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~  167 (391)
                      .++.+.+|+.....   ..........+..++|+  |++| ++++.++.|++||+. +..+..+..+. .+..+.|   +
T Consensus        10 ~~~~v~v~D~~t~~---~~~~i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~-~~~~~~~---~   82 (301)
T d1l0qa2          10 ESDNISVIDVTSNK---VTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAV---S   82 (301)
T ss_dssp             TTTEEEEEETTTTE---EEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEE---C
T ss_pred             CCCEEEEEECCCCe---EEEEEECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCceeeeeeccc-ccccccc---c
Confidence            34556666543221   11222234557788998  5665 566788999999994 55555666554 4678888   5


Q ss_pred             CCCe-EEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCCCCCCCCC
Q psy2107         168 GKDA-AFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFA-TGGWDCLLKIWSADISKERGDPSEN  245 (391)
Q Consensus       168 ~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~  245 (391)
                      +++. .++++..++.+.+|+..    .......+.. .....+++++|+++.++ ++..++.+.+|+..+..........
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (301)
T d1l0qa2          83 PDGKQVYVTNMASSTLSVIDTT----SNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG  157 (301)
T ss_dssp             TTSSEEEEEETTTTEEEEEETT----TTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred             cccccccccccccceeeecccc----cceeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccC
Confidence            6666 55566678899999843    3345555554 45678999999998875 4556788999999876643322111


Q ss_pred             CCC-----------Cccc--cccccccccCCCCCceeeecCccCcccEEEeccCC-eEEEEE---CCCeEEEEecccCce
Q psy2107         246 GDE-----------GTTS--KKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVD-EIITSS---WDHTLKIWDAELGGM  308 (391)
Q Consensus       246 ~~~-----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~l~s~~---~dg~i~iwd~~~~~~  308 (391)
                      ..+           ....  .................... ....+..+++++++ .++.++   .++.|++||+.+++.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~  236 (301)
T d1l0qa2         158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKI  236 (301)
T ss_dssp             SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEE
T ss_pred             CCceEEEeeccccceeeecccccccccccccceeeeeccc-ccCCcceeeccccccccccccccceeeeeeeeecCCCeE
Confidence            100           0000  00001111112222222222 33446677888544 454443   346899999999999


Q ss_pred             eEEEECCeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         309 KSEIVGNKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       309 ~~~~~~~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      ...+..+..+.+++|+|+|++| ++++.++.|++||+.+++   ++..+.
T Consensus       237 ~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~---~~~~~~  283 (301)
T d1l0qa2         237 TARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNT---ITATMA  283 (301)
T ss_dssp             EEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE---EEEEEE
T ss_pred             EEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEEEECCCCe---EEEEEe
Confidence            9999888888999999999976 577789999999998765   555543

>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Putative isomerase YbhE
family: Putative isomerase YbhE
domain: Putative isomerase YbhE
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.4e-14  Score=123.33  Aligned_cols=232  Identities=7%  Similarity=0.146  Sum_probs=157.0

Q ss_pred             EEEEEECCCeEEEEcCCC-c--eEEeccCCCCCeeEEEEEecCCCCeEEEEEe-CCCcEEEEeecCCCCceeEEEEEecC
Q psy2107         128 WILTGCYDHSVHIWTRRG-E--HKLNIPGHGGPVKGVAWLYNDGKDAAFISVS-TDQTAMIWEWKVESNSIECIHVCRGH  203 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~~~-~--~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~  203 (391)
                      .+++++.|++|++|+++. .  .+.....|.+.+..|+|   +|++++|++++ .|+.|++|++............. .+
T Consensus         6 v~v~~~~~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~---spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~-~~   81 (333)
T d1ri6a_           6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVV---SPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-AL   81 (333)
T ss_dssp             EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEE---CTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-EC
T ss_pred             EEEECCCCCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEE---eCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeec-cc
Confidence            457788999999999842 2  33344568899999999   88898885554 58999999987554443433333 34


Q ss_pred             CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEE
Q psy2107         204 ERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQ  282 (391)
Q Consensus       204 ~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  282 (391)
                      ...+..++|+|+|++|++++. ++.+.+|+......                           ........+...+.++.
T Consensus        82 ~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~v~  134 (333)
T d1ri6a_          82 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLP---------------------------VGVVDVVEGLDGCHSAN  134 (333)
T ss_dssp             SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEE---------------------------EEEEEEECCCTTBCCCE
T ss_pred             CCCceEEEEcCCCCEEeecccCCCceeeeccccccc---------------------------eecccccCCCccceEEE
Confidence            556788999999999998875 67889998765221                           12233445667788899


Q ss_pred             eccCCe-EEEEE-CCCeEEEEecccCceeEEEE-------CCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCCCcce-
Q psy2107         283 WTAVDE-IITSS-WDHTLKIWDAELGGMKSEIV-------GNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVKEGAI-  351 (391)
Q Consensus       283 ~~~~~~-l~s~~-~dg~i~iwd~~~~~~~~~~~-------~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~~~~~-  351 (391)
                      +++++. ++.++ .+..+.+|+...........       .......++|++++.+++... ..+...+|+........ 
T Consensus       135 ~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~  214 (333)
T d1ri6a_         135 ISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE  214 (333)
T ss_dssp             ECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred             eeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEeccceeEEeeccccCceEEEeeccccccee
Confidence            996654 55554 56679999987654332221       123567899999998876554 55677788765433211 


Q ss_pred             EEEEec------cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         352 VKSTFS------SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       352 ~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ......      ........+++++++..+++++..++.+.+|++
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~  259 (333)
T d1ri6a_         215 CVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSV  259 (333)
T ss_dssp             EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred             eeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEE
Confidence            111111      233457788999977667777778889999975

>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Quinohemoprotein amine dehydrogenase B chain
domain: Quinohemoprotein amine dehydrogenase B chain
species: Pseudomonas putida [TaxId: 303]

Probab=99.68  E-value=7.5e-16  Score=131.90  Aligned_cols=264  Identities=7%  Similarity=-0.023  Sum_probs=160.0

Q ss_pred             EEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcc-cCCCCcEEEEEec--CCEE-EEEECCCeEEEEcCCC
Q psy2107          70 FLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDC-ILHDDWVSAIDFH--NDWI-LTGCYDHSVHIWTRRG  145 (391)
Q Consensus        70 f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~V~~~~~~--~~~l-~t~~~dg~i~iwd~~~  145 (391)
                      |..+++++.+          .+.++.+.+|+......  ...+ ..|...+.+++|+  |+++ ++++.++.|++||+..
T Consensus         4 ~~~~~~~l~~----------~~~~~~v~v~D~~t~~~--~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t   71 (346)
T d1jmxb_           4 LKAGHEYMIV----------TNYPNNLHVVDVASDTV--YKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDT   71 (346)
T ss_dssp             CCTTCEEEEE----------EETTTEEEEEETTTTEE--EEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred             CCCCCcEEEE----------EcCCCEEEEEECCCCCE--EEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCcc
Confidence            4556666654          23566777777643321  1111 2455667889997  5555 5666889999999954


Q ss_pred             -ceEEeccCC------CCCeeEEEEEecCCCCeEEEEEe------------CCCcEEEEeecCCCCceeEEEEEecCCCC
Q psy2107         146 -EHKLNIPGH------GGPVKGVAWLYNDGKDAAFISVS------------TDQTAMIWEWKVESNSIECIHVCRGHERG  206 (391)
Q Consensus       146 -~~~~~~~~~------~~~v~~l~~~~~~~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~  206 (391)
                       +....+...      ...+..++|   ++++.++++++            .++.+.+|+....... ..+... .....
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~v~~---s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~-~~~~~  146 (346)
T d1jmxb_          72 CKNTFHANLSSVPGEVGRSMYSFAI---SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEA-KPVRTF-PMPRQ  146 (346)
T ss_dssp             TEEEEEEESCCSTTEEEECSSCEEE---CTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGB-CCSEEE-ECCSS
T ss_pred             CeeeeeecccccccccCCceEEEEE---ecCCCEEEEEecCCcceeeeeccCcceEEEEecccceee-eEEEee-eccCc
Confidence             444443322      124567888   77888887665            4677888885422211 111111 12345


Q ss_pred             eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCC-----------CCCCCccccc---------------------
Q psy2107         207 LETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSE-----------NGDEGTTSKK---------------------  254 (391)
Q Consensus       207 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-----------~~~~~~~~~~---------------------  254 (391)
                      +..+.+++++..++++   +.+.+|++.+++.......           ..........                     
T Consensus       147 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (346)
T d1jmxb_         147 VYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP  223 (346)
T ss_dssp             CCCEEECTTSCEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred             eEEEEecCCCEEEEeC---CcceEEEccCCCEEEEEecCCCccceEEeccccEEEEEecCCCceEeeeeeeeeccCceeE
Confidence            6667778888766543   4588898876554321100           0000000000                     


Q ss_pred             ------cccccccCCCCC-ceeeecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCC
Q psy2107         255 ------RKKEYSSASSRT-PLITLKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPL  326 (391)
Q Consensus       255 ------~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~  326 (391)
                            .....++..... .......|...+..+.+++++. ++.. .++.+.+||..+++.+..+.....+.+++|+||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~va~s~D  302 (346)
T d1jmxb_         224 ATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYG-VLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKK  302 (346)
T ss_dssp             CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEE-EESEEEEEETTTTEEEEEEECSSCCCEEEECSS
T ss_pred             eeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEe-cCCeEEEEECCCCcEEEEEcCCCCEEEEEEcCC
Confidence                  000000111111 1223345666677777775444 4444 456899999999999999988888999999999


Q ss_pred             CCEEEEeeCCCcEEEEcCCCCCcceEEEEec
Q psy2107         327 SKLVITASADKQIRLYDPKVKEGAIVKSTFS  357 (391)
Q Consensus       327 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~  357 (391)
                      |++|++++.|+.|++||+++.+   .+..+.
T Consensus       303 G~~l~v~~~d~~v~v~D~~t~~---~i~~i~  330 (346)
T d1jmxb_         303 GDKLYLGGTFNDLAVFNPDTLE---KVKNIK  330 (346)
T ss_dssp             SSCEEEESBSSEEEEEETTTTE---EEEEEE
T ss_pred             CCEEEEEeCCCcEEEEECccCC---EEEEEE
Confidence            9999999999999999998876   555554

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.67  E-value=6.8e-14  Score=121.12  Aligned_cols=266  Identities=10%  Similarity=-0.046  Sum_probs=151.5

Q ss_pred             ccCCCCcEEEEEec--CCEEEEE-----ECCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEEe------
Q psy2107         112 CILHDDWVSAIDFH--NDWILTG-----CYDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVS------  177 (391)
Q Consensus       112 ~~~h~~~V~~~~~~--~~~l~t~-----~~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~------  177 (391)
                      ...+..++.+++++  ++.++..     +.++.|.+||. +++.+..+..+..+  .++|   +|+++++++++      
T Consensus        16 ~~~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~~~~~~~~--~~a~---SpDG~~l~va~~~~~~~   90 (373)
T d2madh_          16 AGAADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVA---AHSGSEFALASTSFSRI   90 (373)
T ss_pred             cccCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCCCEEEEEeCCCCc--cEEE---cCCCCEEEEEeecCCcc
Confidence            34577888888888  5566543     23467999998 66666676655443  6889   77899888775      


Q ss_pred             ----CCCcEEEEeecCCCCceeEEEEEecCCCCe-------EEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCC
Q psy2107         178 ----TDQTAMIWEWKVESNSIECIHVCRGHERGL-------ETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSE  244 (391)
Q Consensus       178 ----~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v-------~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~  244 (391)
                          .++.|.+||..    ..+.+..+..+....       ..+.|+++++.++...  .++.+.+|+....+.......
T Consensus        91 ~~~~~~~~v~v~D~~----t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~  166 (373)
T d2madh_          91 AKGKRTDYVEVFDPV----TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSSDDQLLSS  166 (373)
T ss_pred             cccccceEEEEEECC----CCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCeEEEEecc
Confidence                46789999954    334455554444332       4577888888765554  456788888866443221111


Q ss_pred             CCCCCccccccccccccCCCCCceeeecCccCc-----------------ccEEEeccCCeEEEEECCCeEEEEecccCc
Q psy2107         245 NGDEGTTSKKRKKEYSSASSRTPLITLKGHKEA-----------------ISAVQWTAVDEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      ........... ..+........+..+......                 ...+.+.+++.++..+.++.+.+|+.....
T Consensus       167 ~~~~~~s~~g~-~~~v~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~  245 (373)
T d2madh_         167 PTCYHIHPGAP-STFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAG  245 (373)
T ss_pred             ceeEEEecCCC-cEEEEEcCCCeEEEEEcCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCe
Confidence            00000000000 000000000111111111100                 011223344556666677777777776654


Q ss_pred             eeEEEEC-------------CeeeEEEEECCCCCEE----------EEeeCCCcEEEEcCCCCCcceEEEEeccccCcEE
Q psy2107         308 MKSEIVG-------------NKSFFDVHYSPLSKLV----------ITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQ  364 (391)
Q Consensus       308 ~~~~~~~-------------~~~i~~~~~~p~~~~l----------~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~  364 (391)
                      .......             ......+++++++..+          ++...++.+.+||..+++   .+..+. +...+.
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~---~~~~~~-~~~~~~  321 (373)
T d2madh_         246 ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ---TSSQIS-LGHDVD  321 (373)
T ss_pred             EEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEeecCCCeEEEEECCCCc---EEEEec-CCCCee
Confidence            3222211             1122335556655543          344556788999988766   444443 667799


Q ss_pred             EEEECCCCCC-EEEEeeCCCcEEEEecC
Q psy2107         365 SVRWSPIDPQ-LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       365 ~~~~~~~~~~-~l~s~~~dg~v~iwdlr  391 (391)
                      +++|+||+.. ++++++.|++|+|||++
T Consensus       322 ~~a~spDG~~~l~vt~~~d~~v~v~D~~  349 (373)
T d2madh_         322 AISVAQDGGPDLYALSAGTEVLHIYDAG  349 (373)
T ss_pred             EEEECCCCCEEEEEEeCCCCeEEEEECC
Confidence            9999996554 46789999999999974

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.64  E-value=3.7e-15  Score=128.25  Aligned_cols=255  Identities=7%  Similarity=-0.031  Sum_probs=155.3

Q ss_pred             ecCCEEEEEE-----CCCeEEEEcC-CCceEEeccCCCCCeeEEEEEecCCCCeEEEEE----------eCCCcEEEEee
Q psy2107         124 FHNDWILTGC-----YDHSVHIWTR-RGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISV----------STDQTAMIWEW  187 (391)
Q Consensus       124 ~~~~~l~t~~-----~dg~i~iwd~-~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~----------~~dg~v~iwd~  187 (391)
                      .++..+++..     .++.|.+||. +++.+.++..+..  ..++|   +|++++|++.          ..|+.|++||.
T Consensus        11 pdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~~~~g~~--~~~a~---SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~   85 (355)
T d2bbkh_          11 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL--PNPVV---ADDGSFIAHASTVFSRIARGERTDYVEVFDP   85 (355)
T ss_dssp             CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS--CEEEE---CTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred             CCCCEEEEEecccCCCcCeEEEEECCCCcEEEEEECCCC--CceEE---cCCCCEEEEEeCCCccccccCCCCEEEEEEC
Confidence            3466665543     4567999999 5555666654443  37899   7788877654          44789999995


Q ss_pred             cCCCCceeEEEEEecCC-------CCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCc--------
Q psy2107         188 KVESNSIECIHVCRGHE-------RGLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGT--------  250 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~-------~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~--------  250 (391)
                      .  +  .+.+..+..+.       .....++|+|++++++.++  .+..+.+|+..+++.............        
T Consensus        86 ~--t--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (355)
T d2bbkh_          86 V--T--LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTF  161 (355)
T ss_dssp             T--T--CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred             C--C--CCEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEecCCcceEeecCCcce
Confidence            4  2  33444443222       2345689999999887764  467899999987664332111100000        


Q ss_pred             --cccccccccccCCCCCceeee------cCccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeE--EEECC----
Q psy2107         251 --TSKKRKKEYSSASSRTPLITL------KGHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKS--EIVGN----  315 (391)
Q Consensus       251 --~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~--~~~~~----  315 (391)
                        ........+............      ..+...+....+. +++.++.++.++.+.+|++..+....  ....+    
T Consensus       162 ~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~  241 (355)
T d2bbkh_         162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAE  241 (355)
T ss_dssp             EEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHH
T ss_pred             EEEcCCCCEEEEEecCCCeEEEEecccccceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccce
Confidence              000000000000001111111      1233334555566 66778899999999999998775432  12211    


Q ss_pred             -------eeeEEEEECCCCCEEEEeeCC----------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC-EEE
Q psy2107         316 -------KSFFDVHYSPLSKLVITASAD----------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFV  377 (391)
Q Consensus       316 -------~~i~~~~~~p~~~~l~~g~~d----------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~  377 (391)
                             .....+++++++..++....+          +.|.+||..+++   .+..+. +...+.+++|+|++.. +++
T Consensus       242 ~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~---~~~~~~-~~~~~~~~a~spDG~~~l~v  317 (355)
T d2bbkh_         242 RADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFE-MGHEIDSINVSQDEKPLLYA  317 (355)
T ss_dssp             HHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEE-EEEEECEEEECCSSSCEEEE
T ss_pred             EeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCc---EEEEec-CCCCEEEEEEcCCCCeEEEE
Confidence                   123458889999987765443          369999998766   555554 3456899999996654 567


Q ss_pred             EeeCCCcEEEEecC
Q psy2107         378 SASFDNSVKLWDLR  391 (391)
Q Consensus       378 s~~~dg~v~iwdlr  391 (391)
                      +++.|+.|+|||++
T Consensus       318 ~~~~d~~i~v~D~~  331 (355)
T d2bbkh_         318 LSTGDKTLYIHDAE  331 (355)
T ss_dssp             EETTTTEEEEEETT
T ss_pred             EECCCCEEEEEECC
Confidence            78889999999974

>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]

Probab=99.56  E-value=1.4e-12  Score=112.59  Aligned_cols=281  Identities=9%  Similarity=-0.081  Sum_probs=160.0

Q ss_pred             eeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCCCCCcccCCCCcEE-------EEEec--CCEEEEE--ECCC
Q psy2107          68 FDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTPSPLDCILHDDWVS-------AIDFH--NDWILTG--CYDH  136 (391)
Q Consensus        68 ~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-------~~~~~--~~~l~t~--~~dg  136 (391)
                      ..|++||+.++......-........+.+.+|+........  ....+.....       .+.|+  ++.++..  ..++
T Consensus        71 ~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~  148 (373)
T d2madh_          71 PVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA--DIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGP  148 (373)
T ss_pred             EEEcCCCCEEEEEeecCCcccccccceEEEEEECCCCcEEE--EEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCC
Confidence            68999998876543322222223456678888765333211  1112222222       23333  4433333  3445


Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEe------cCCCCeEEE
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCR------GHERGLETV  210 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~------~~~~~v~~l  210 (391)
                      .+.+|+.......   .+.....++.+.|.  ....+++.+.||.+.+|+....    .......      ++......+
T Consensus       149 ~~~~~~~~~~~~~---~~~~~~~~~~~s~~--g~~~~v~~~~dg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~  219 (373)
T d2madh_         149 AVGLVVQGGSSDD---QLLSSPTCYHIHPG--APSTFYLLCAQGGLAKTDHAGG----AAGAGLVGAMLTAAQNLLTQPA  219 (373)
T ss_pred             ceEEeeccCCeEE---EEeccceeEEEecC--CCcEEEEEcCCCeEEEEEcCCc----eeeEEEeeeccccCccceeeeE
Confidence            6777776443332   23334567888543  2346678899999999995422    2222221      112223445


Q ss_pred             EEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc-CcccEEEeccCCeE
Q psy2107         211 TVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK-EAISAVQWTAVDEI  289 (391)
Q Consensus       211 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~l  289 (391)
                      .+.+++. ++..+.++.+.+|+..................    ......   ..........+. .........+...+
T Consensus       220 ~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~d~~~~~~~~~~~~~~  291 (373)
T d2madh_         220 QANKSGR-IVWPVYSGKILQADISAAGATNKAPIDALSGG----RKADTW---RPGGWQQVAYLKSSDGIYLLTSEQSAW  291 (373)
T ss_pred             EECCCce-EEEecCCceEEEEEcCCCeEEEEEeeccccCc----EEeeee---ccCcceeeEEecCCCeEEEecCCCceE
Confidence            5666654 55666788999999876442110000000000    000000   000000000111 11111122244556


Q ss_pred             EEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCC--EEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         290 ITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK--LVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       290 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~--~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      ++...++.+.+||..+++.+..+.....+..++|+|||+  ++++++.|+.|++||+.+++   .+..+..+....+.++
T Consensus       292 ~~~~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~---~~~~~~~~g~~P~~l~  368 (373)
T d2madh_         292 KLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD---QDQSTVELGSGPQVLS  368 (373)
T ss_pred             EeecCCCeEEEEECCCCcEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC---EEEEECCCCCCCcEEE
Confidence            777888999999999999999998888899999999998  45678899999999999887   7888888877788887


Q ss_pred             ECC
Q psy2107         368 WSP  370 (391)
Q Consensus       368 ~~~  370 (391)
                      +.+
T Consensus       369 ~~~  371 (373)
T d2madh_         369 VMN  371 (373)
T ss_pred             Eec
Confidence            754

>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.49  E-value=1e-12  Score=112.69  Aligned_cols=89  Identities=15%  Similarity=0.080  Sum_probs=66.4

Q ss_pred             cEEEeccCC-eEEEEECC----------CeEEEEecccCceeEEEECCeeeEEEEECCCCC--EEEEeeCCCcEEEEcCC
Q psy2107         279 SAVQWTAVD-EIITSSWD----------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK--LVITASADKQIRLYDPK  345 (391)
Q Consensus       279 ~~~~~~~~~-~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~--~l~~g~~dg~i~iwd~~  345 (391)
                      ..+++++++ .++....+          ..|.+||..+++.+..+.....+.+++|+|+|+  ++++++.|+.|++||++
T Consensus       252 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~  331 (355)
T d2bbkh_         252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE  331 (355)
T ss_dssp             SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred             EEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCCcEEEEecCCCCEEEEEEcCCCCeEEEEEECCCCEEEEEECC
Confidence            456777444 34443322          479999999999999988888899999999998  45677789999999999


Q ss_pred             CCCcceEEEEeccccCcEEEEEECC
Q psy2107         346 VKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       346 ~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                      +++   .+..+.++......+.+.+
T Consensus       332 tg~---~~~~i~~~G~~p~~i~~~d  353 (355)
T d2bbkh_         332 SGE---ELRSVNQLGHGPQVITTAD  353 (355)
T ss_dssp             TCC---EEEEECCCCSSCCEEECCC
T ss_pred             CCC---EEEEEeCcCCCccEEEeCC
Confidence            877   7777776655555555443

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.39  E-value=2.5e-11  Score=104.54  Aligned_cols=232  Identities=7%  Similarity=-0.064  Sum_probs=138.2

Q ss_pred             EEec--CCEEEEEE----------CCCeEEEEcC-CCceEEeccCCC-------CCeeEEEEEecCCCCeEEEEEe-CCC
Q psy2107         122 IDFH--NDWILTGC----------YDHSVHIWTR-RGEHKLNIPGHG-------GPVKGVAWLYNDGKDAAFISVS-TDQ  180 (391)
Q Consensus       122 ~~~~--~~~l~t~~----------~dg~i~iwd~-~~~~~~~~~~~~-------~~v~~l~~~~~~~~~~~l~s~~-~dg  180 (391)
                      ++|+  |+.+++++          .|+.|.+||. +.+....+..+.       .....++|   ++++++++.+. .++
T Consensus        70 ~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~---SpDGk~l~va~~~~~  146 (368)
T d1mdah_          70 AVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGN---CASSACLLFFLFGSS  146 (368)
T ss_dssp             EEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEE---CTTSSCEEEEECSSS
T ss_pred             ceECCCCCEEEEEcccCccccccccCCeEEEEECCCCcEeeeecCCccceecccCCccceEE---CCCCCEEEEEeCCCC
Confidence            4555  66666654          4778999999 455555443222       22346889   78898887775 579


Q ss_pred             cEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccc
Q psy2107         181 TAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS  260 (391)
Q Consensus       181 ~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (391)
                      .+.+||+.    ..+.+..+..+.....   +......++..+.||.+.+|+..........                  
T Consensus       147 ~v~~~d~~----~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~------------------  201 (368)
T d1mdah_         147 AAAGLSVP----GASDDQLTKSASCFHI---HPGAAATHYLGSCPASLAASDLAAAPAAAGI------------------  201 (368)
T ss_dssp             CEEEEEET----TTEEEEEEECSSCCCC---EEEETTEEECCCCTTSCEEEECCSSCCCCEE------------------
T ss_pred             eEEEEECC----CCcEeEEeeccCcceE---ccCCCceEEEEcCCCCEEEEEecCCceeeee------------------
Confidence            99999965    3345555554443321   1123456777788899988887653321100                  


Q ss_pred             cCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECC-------------eeeEEEEECCCC
Q psy2107         261 SASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGN-------------KSFFDVHYSPLS  327 (391)
Q Consensus       261 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~i~~~~~~p~~  327 (391)
                           ........+...+....+.+.+..+. ...+.+.+++...+.........             .....++++|++
T Consensus       202 -----~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~  275 (368)
T d1mdah_         202 -----VGAQCTGAQNCSSQAAQANYPGMLVW-AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT  275 (368)
T ss_dssp             -----CCCCSCTTSCBCSCCEEETTTTEEEE-CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred             -----eecccccccccceeecccccCcEEEE-ecCCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCC
Confidence                 00011122333444555555554333 23455666666554433222110             122457888888


Q ss_pred             CEEEEeeCC---------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCC-EEEEeeCCCcEEEEecC
Q psy2107         328 KLVITASAD---------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQ-LFVSASFDNSVKLWDLR  391 (391)
Q Consensus       328 ~~l~~g~~d---------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~~~dg~v~iwdlr  391 (391)
                      ..++....+         ..|.+||..+++   .+..+. +...+.+++|+||+.. +++++..|+.|++||..
T Consensus       276 ~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~---~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~  345 (368)
T d1mdah_         276 DGIMILTVEHSRSCLAAAENTSSVTASVGQ---TSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA  345 (368)
T ss_dssp             TEEEEEEEECSSCTTSCEEEEEEEESSSCC---EEECCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred             CEEEEEecCCCceeecCCceEEEEECCCCc---EeEEec-CCCceeEEEECCCCCEEEEEEeCCCCeEEEEECC
Confidence            876654322         358999998776   555544 4457899999996654 56788889999999963

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.29  E-value=2e-10  Score=102.32  Aligned_cols=149  Identities=12%  Similarity=0.033  Sum_probs=99.3

Q ss_pred             ceeeEEeCCeEehhhHHHHHHHcCCCccceEEEEEEeccCCC---CCCcccCCCCcEEEEEec--CCEEEEEEC------
Q psy2107          66 IQFDFLIAGELLRTSVTSFLESKGISSENVIDVEYLESTPTP---SPLDCILHDDWVSAIDFH--NDWILTGCY------  134 (391)
Q Consensus        66 ~~~~f~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~h~~~V~~~~~~--~~~l~t~~~------  134 (391)
                      ....++.+++++..            .++.+.++........   ....+..|...|.++.|+  +++|+.++.      
T Consensus        20 ~~~~W~~d~~~~~~------------~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r   87 (470)
T d2bgra1          20 YSLRWISDHEYLYK------------QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWR   87 (470)
T ss_dssp             CCCEECSSSEEEEE------------SSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSS
T ss_pred             cCCEeCCCCEEEEE------------cCCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceee
Confidence            44567788877753            2344555543322211   123455677889999998  668877743      


Q ss_pred             ---CCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEE-------Eec--
Q psy2107         135 ---DHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHV-------CRG--  202 (391)
Q Consensus       135 ---dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-------~~~--  202 (391)
                         ++.+.|||+.+.....+..+...+..+.|   +|+|+.+|.. .++.+.+|+..  .+....+..       +.+  
T Consensus        88 ~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~---SPDG~~ia~~-~~~~l~~~~~~--~g~~~~~t~~~~~~~~~~g~~  161 (470)
T d2bgra1          88 HSYTASYDIYDLNKRQLITEERIPNNTQWVTW---SPVGHKLAYV-WNNDIYVKIEP--NLPSYRITWTGKEDIIYNGIT  161 (470)
T ss_dssp             SCEEEEEEEEETTTTEECCSSCCCTTEEEEEE---CSSTTCEEEE-ETTEEEEESST--TSCCEECCSCCBTTTEEESBC
T ss_pred             eccCceEEEEECCCCcccccccCCcccccccc---ccCcceeeEe-ecccceEEECC--CCceeeeeeccCCCccccccc
Confidence               57889999988888889999999999999   8889988885 46789999854  222111110       111  


Q ss_pred             -------CCCCeEEEEEcCCCCEEEEEeCCCc-EEEEE
Q psy2107         203 -------HERGLETVTVSESRQQFATGGWDCL-LKIWS  232 (391)
Q Consensus       203 -------~~~~v~~l~~~~~~~~l~sg~~dg~-i~iwd  232 (391)
                             ..+....+.|+|+|++|+....|.. +..|.
T Consensus       162 d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEE
T ss_pred             ceeeeeeecCCccccEECCCCCccceeEecCCcCceEE
Confidence                   1233566889999999998876533 44443

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=99.25  E-value=7.8e-09  Score=85.93  Aligned_cols=235  Identities=8%  Similarity=-0.013  Sum_probs=153.5

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      ++..+++.  |+++++...+++|..|+..+... .+......+.+++|   +++++++++...++.+..|+.........
T Consensus        29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~-~~~~~~~~~~gla~---~~dG~l~v~~~~~~~~~~~~~~~~~~~~~  104 (302)
T d2p4oa1          29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-IHATVEGKVSGLAF---TSNGDLVATGWNADSIPVVSLVKSDGTVE  104 (302)
T ss_dssp             CEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-EEEECSSEEEEEEE---CTTSCEEEEEECTTSCEEEEEECTTSCEE
T ss_pred             CcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE-EEEcCCCCcceEEE---cCCCCeEEEecCCceEEEEEeccccccee
Confidence            57778887  77888988999999999876543 34456678999999   88899999998899998888654444333


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                      .+... ........+++.++++++++.+.++.+..++...+.....                  ...... .........
T Consensus       105 ~~~~~-~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~------------------~~~~~~-~~~~~~~~~  164 (302)
T d2p4oa1         105 TLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIW------------------LEHPML-ARSNSESVF  164 (302)
T ss_dssp             EEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEE------------------EECGGG-SCSSTTCCS
T ss_pred             ecccc-CCccccceeEEccCCCEEeeccccccceeeeccCCcceeE------------------ecCCcc-ceeeccCcc
Confidence            33332 3456688999999999888888888888888765321000                  000000 000011112


Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccCcee---EEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceE
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELGGMK---SEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIV  352 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~  352 (391)
                      .....+.+..+..+++.+..+.|..++.......   ..+........+++.++|++.++...++.|..++....  ...
T Consensus       165 ~~~ngi~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~--~~~  242 (302)
T d2p4oa1         165 PAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS--TTI  242 (302)
T ss_dssp             CSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC--EEE
T ss_pred             cccccccccCCceeeecCCCCeEEeccccccccccccccccCCCCCcceEECCCCCEEEEEcCCCcEEEECCCCC--EEE
Confidence            2345566666555677778889998887654322   22223345567999999998888888999999987532  112


Q ss_pred             EEEeccccCcEEEEEE---CCCCCCEEEE
Q psy2107         353 KSTFSSHKEWVQSVRW---SPIDPQLFVS  378 (391)
Q Consensus       353 ~~~~~~h~~~v~~~~~---~~~~~~~l~s  378 (391)
                      +......-..+++++|   ++|+..++++
T Consensus       243 ~~~~~~~~~~pt~vafg~~~~D~~~Lyvt  271 (302)
T d2p4oa1         243 IAQAEQGVIGSTAVAFGQTEGDCTAIYVV  271 (302)
T ss_dssp             EECGGGTCTTEEEEEECCSTTTTTEEEEE
T ss_pred             EEecCCCCCCceEEEEcCCCCCCCEEEEE
Confidence            2333334456899999   5544444444

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.23  E-value=7.4e-10  Score=95.31  Aligned_cols=224  Identities=7%  Similarity=0.006  Sum_probs=135.7

Q ss_pred             EEEEEECCCeEEEEcC-CCceEEeccC------------------------------CCCCeeEEEEEecCCCCeEEEEE
Q psy2107         128 WILTGCYDHSVHIWTR-RGEHKLNIPG------------------------------HGGPVKGVAWLYNDGKDAAFISV  176 (391)
Q Consensus       128 ~l~t~~~dg~i~iwd~-~~~~~~~~~~------------------------------~~~~v~~l~~~~~~~~~~~l~s~  176 (391)
                      .+++|+.+|.|++|++ +.+.+.++..                              |........+   ++||+++++.
T Consensus        13 ~f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~g---tpDGr~lfV~   89 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDG---RYDGKYLFIN   89 (441)
T ss_dssp             EEEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETT---EEEEEEEEEE
T ss_pred             EEEeCCCCCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecc---cCCCCEEEEE
Confidence            3677888999999998 4554444321                              1112222222   4578877554


Q ss_pred             -eCCCcEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCC--EEEEEeCCCc-----------------EEEEECCC
Q psy2107         177 -STDQTAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQ--QFATGGWDCL-----------------LKIWSADI  235 (391)
Q Consensus       177 -~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~--~l~sg~~dg~-----------------i~iwd~~~  235 (391)
                       ..+++|.++|++    ..+....+. .+...+..++|+|+++  +++..+.+..                 +..+|..+
T Consensus        90 d~~~~rVavIDl~----t~k~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t  165 (441)
T d1qnia2          90 DKANTRVARIRLD----IMKTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAET  165 (441)
T ss_dssp             ETTTTEEEEEETT----TTEEEEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTT
T ss_pred             cCCCCEEEEEECC----CCcEeeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCcc
Confidence             578899999954    334444433 3567899999999987  4554444321                 23344443


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc------------------------------
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA------------------------------  285 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------------------------------  285 (391)
                      .+.                             ...+.. ......+.+++                              
T Consensus       166 ~~v-----------------------------~~qI~v-~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~  215 (441)
T d1qnia2         166 MDV-----------------------------AWQVIV-DGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVV  215 (441)
T ss_dssp             CSE-----------------------------EEEEEE-SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEE
T ss_pred             cee-----------------------------eEEEec-CCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEE
Confidence            221                             111111 11223333332                              


Q ss_pred             ------------CCeEEEEECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCc---
Q psy2107         286 ------------VDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEG---  349 (391)
Q Consensus       286 ------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~---  349 (391)
                                  ++..+..+.++.+.+++......+..+........+.++|||++++ ++..+++|.+||+.....   
T Consensus       216 v~n~p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~  295 (441)
T d1qnia2         216 VFNVERIAAAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFE  295 (441)
T ss_dssp             EEEHHHHHHHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTT
T ss_pred             eCCccceEEEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhh
Confidence                        3333333345667777777777777887777778899999999865 567899999999754210   


Q ss_pred             ------ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         350 ------AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       350 ------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                            ..+... ....-.....+|++ +++.+.|...|..|..|++
T Consensus       296 ~~~~~~~~~~~~-~~~glgplh~~fd~-~g~~yts~~~ds~v~kw~~  340 (441)
T d1qnia2         296 DKIELRDTIVAE-PELGLGPLHTTFDG-RGNAYTTLFIDSQVCKWNI  340 (441)
T ss_dssp             TSSCGGGGEEEC-CBCCSCEEEEEECS-SSEEEEEETTTTEEEEEEH
T ss_pred             ccCCcceEEEee-cccccCcccceecC-CceEEEcccccceEEEecc
Confidence                  111111 11122356678999 6678889999999999986

>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Pseudomonas nautica [TaxId: 2743]

Probab=99.13  E-value=1.4e-09  Score=93.62  Aligned_cols=183  Identities=11%  Similarity=0.049  Sum_probs=122.6

Q ss_pred             EEEEEeCCCcEEEEeecCCCCceeEEEEEec------------------------------CCCCeEEEEEcCCCCEEEE
Q psy2107         172 AFISVSTDQTAMIWEWKVESNSIECIHVCRG------------------------------HERGLETVTVSESRQQFAT  221 (391)
Q Consensus       172 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~------------------------------~~~~v~~l~~~~~~~~l~s  221 (391)
                      .+++++.+|.|++|++.    ..+.+..+..                              |..........|||++|++
T Consensus        13 ~f~Sgg~sG~V~V~dlp----S~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV   88 (441)
T d1qnia2          13 GFWSGGHQGEVRVLGVP----SMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFI   88 (441)
T ss_dssp             EEEECBTTCCEEEEEET----TTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEE
T ss_pred             EEEeCCCCCcEEEEeCC----CCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEEE
Confidence            47788899999999974    2233333321                              2233444555789998866


Q ss_pred             E-eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec-CccCcccEEEeccCCe--EEEEECCCe
Q psy2107         222 G-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK-GHKEAISAVQWTAVDE--IITSSWDHT  297 (391)
Q Consensus       222 g-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~--l~s~~~dg~  297 (391)
                      . ..+++|.++|+++.+                             ....+. .+...+..++|++++.  .+++..+..
T Consensus        89 ~d~~~~rVavIDl~t~k-----------------------------~~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~  139 (441)
T d1qnia2          89 NDKANTRVARIRLDIMK-----------------------------TDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFV  139 (441)
T ss_dssp             EETTTTEEEEEETTTTE-----------------------------EEEEEECTTCCCEEEEEECCSSBCCEEEEEECSC
T ss_pred             EcCCCCEEEEEECCCCc-----------------------------EeeEEecCCCCCccceEEeccCCEEEEEeccCCc
Confidence            5 467899999998743                             233332 3456678889986554  344333333


Q ss_pred             ------------------EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC-----------------------
Q psy2107         298 ------------------LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD-----------------------  336 (391)
Q Consensus       298 ------------------i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d-----------------------  336 (391)
                                        +..+|..+.+....+........+.++|+|+++++++.+                       
T Consensus       140 v~~~~dg~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~  219 (441)
T d1qnia2         140 IPQPNDGTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNV  219 (441)
T ss_dssp             EESSCSSSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEH
T ss_pred             ccccCcccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecCCCceEEEeccCcceEEEEEeCCc
Confidence                              355888888888888777778889999999988877643                       


Q ss_pred             ------------------CcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         337 ------------------KQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       337 ------------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                                        +.+.+++.....   ....+..... ...+.++||+.++++++..+++|.|||+.
T Consensus       220 p~~~~~~~dGk~~~v~~~~v~vvd~~~~~~---v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~  288 (441)
T d1qnia2         220 ERIAAAVKAGNFKTIGDSKVPVVDGRGESE---FTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAID  288 (441)
T ss_dssp             HHHHHHHHTTCCBCCTTCCCCEEECSSSCS---SEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGG
T ss_pred             cceEEEecCCCEEEeCCCCcEEEEcccCCc---eEEEEeCCCC-ccCceECCCCCEEEEeCCcCCcEEEEEee
Confidence                              233333332222   4445555444 57899999777778889999999999973

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=99.07  E-value=2.1e-07  Score=77.38  Aligned_cols=247  Identities=12%  Similarity=0.107  Sum_probs=136.0

Q ss_pred             EEEEEec--CCEEEEEEC-------CCeEEEEcCCCceEEeccC-----CCCCeeEEEEEecCCCCeEEEEEeCCCcEEE
Q psy2107         119 VSAIDFH--NDWILTGCY-------DHSVHIWTRRGEHKLNIPG-----HGGPVKGVAWLYNDGKDAAFISVSTDQTAMI  184 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~-------dg~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~i  184 (391)
                      .-.++|+  |+++++...       +|+|..||..+.....+..     ..+.-..++|   +++++.++++...+.+..
T Consensus        20 ~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~~~~~~~~~~~~g~P~Gl~~---~~dg~~l~vad~~~~i~~   96 (314)
T d1pjxa_          20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQC---DRDANQLFVADMRLGLLV   96 (314)
T ss_dssp             CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEE---CSSSSEEEEEETTTEEEE
T ss_pred             CeEeEEeCCCCEEEEECccccccccCCEEEEEECCCCcEEEEECCccccCCCcceeEEE---eCCCCEEEEEECCCeEEE
Confidence            3456676  555554322       4678899986544332221     1223567888   778877777777777777


Q ss_pred             EeecCCCCceeEEEEEecCC---CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccccccccccc
Q psy2107         185 WEWKVESNSIECIHVCRGHE---RGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSS  261 (391)
Q Consensus       185 wd~~~~~~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (391)
                      .+.+  ... ..+.......   .....+++.++|++.++-.. +....|+......              ......+..
T Consensus        97 ~~~~--g~~-~~~~~~~~~g~~~~~pndl~~d~~G~lyvtd~~-~~~~~~~~~~~~~--------------~~~G~v~~~  158 (314)
T d1pjxa_          97 VQTD--GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPA-GEVAPADYTRSMQ--------------EKFGSIYCF  158 (314)
T ss_dssp             EETT--SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECB-CBCTTSCCCBTTS--------------SSCEEEEEE
T ss_pred             EeCC--CcE-EEEEeccccccccCCCcEEEECCCCCEEEecCc-cCcccccccceec--------------cCCceEEEE
Confidence            7732  221 1111111111   13567889998887665322 1111111000000              000000000


Q ss_pred             CCCCCceeeecCccCcccEEEeccCC-----eEE-EEECCCeEEEEecccCceeEEE------EC--CeeeEEEEECCCC
Q psy2107         262 ASSRTPLITLKGHKEAISAVQWTAVD-----EII-TSSWDHTLKIWDAELGGMKSEI------VG--NKSFFDVHYSPLS  327 (391)
Q Consensus       262 ~~~~~~~~~~~~~~~~v~~~~~~~~~-----~l~-s~~~dg~i~iwd~~~~~~~~~~------~~--~~~i~~~~~~p~~  327 (391)
                      ....+ ...+...-..-..++|++++     .|+ +-+..+.|..||+.....+...      ..  ......+++.++|
T Consensus       159 ~~dg~-~~~~~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~G  237 (314)
T d1pjxa_         159 TTDGQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDN  237 (314)
T ss_dssp             CTTSC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTC
T ss_pred             eecCc-eeEeeCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCC
Confidence            00011 11111122223567887432     344 4466788999987654333211      11  1245679999999


Q ss_pred             CEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         328 KLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       328 ~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ++.++....+.|.+||...+.   ....+......+++++|.|++..+++|.+.+|.|...++
T Consensus       238 nlyVa~~~~g~I~~~dp~~g~---~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~  297 (314)
T d1pjxa_         238 NLLVANWGSSHIEVFGPDGGQ---PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW  297 (314)
T ss_dssp             CEEEEEETTTEEEEECTTCBS---CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred             cEEEEEcCCCEEEEEeCCCCE---EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence            988888788999999987654   334444455678999999966568888888898887775

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.07  E-value=5.9e-07  Score=73.32  Aligned_cols=229  Identities=16%  Similarity=0.165  Sum_probs=146.5

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCC------CCCeeEEEEEecCCCCeEEEE-EeCCCcEEEEeec
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGH------GGPVKGVAWLYNDGKDAAFIS-VSTDQTAMIWEWK  188 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~------~~~v~~l~~~~~~~~~~~l~s-~~~dg~v~iwd~~  188 (391)
                      .-..|+++  ++++++-..+..|++||.++..+..+...      ...-..+++.+  ..+..+++ .+.++.|..++. 
T Consensus        24 ~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~~~~~~~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~i~~~~~-  100 (279)
T d1q7fa_          24 EPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVR--NSGDIIVTERSPTHQIQIYNQ-  100 (279)
T ss_dssp             CEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEET--TTTEEEEEECGGGCEEEEECT-
T ss_pred             CccEEEEcCCCCEEEEECCCCEEEEEeCCCCEEEEecccCCCcccccccccccccc--cccccceeccCCccccccccc-
Confidence            34677776  66777777888999999988777655321      11233455532  23444443 344556666652 


Q ss_pred             CCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCc
Q psy2107         189 VESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTP  267 (391)
Q Consensus       189 ~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (391)
                          .......+. ........+++.++++++++....+.+.+++.+.                              +.
T Consensus       101 ----~g~~~~~~~~~~~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g------------------------------~~  146 (279)
T d1q7fa_         101 ----YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG------------------------------NV  146 (279)
T ss_dssp             ----TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS------------------------------CE
T ss_pred             ----cccceeecCCCcccccceeccccCCcEEEEeeccceeeEeccCC------------------------------ce
Confidence                223334442 2345678899999999888877777788877542                              12


Q ss_pred             eeee--cCccCcccEEEeccCCeE-EEEECCCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeC-CCcEE
Q psy2107         268 LITL--KGHKEAISAVQWTAVDEI-ITSSWDHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASA-DKQIR  340 (391)
Q Consensus       268 ~~~~--~~~~~~v~~~~~~~~~~l-~s~~~dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~-dg~i~  340 (391)
                      +..+  ..+......+++.+++.+ ++....+.|++||. +++.+.++....   ....+++.++|+++++-.. ++.|.
T Consensus       147 ~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~  225 (279)
T d1q7fa_         147 LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLT  225 (279)
T ss_dssp             EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEE
T ss_pred             eecccccccccccceeeeccceeEEeeeccccceeeeec-CCceeeeecccccccCCcccccccCCeEEEEECCCCcEEE
Confidence            2222  234455677888876664 45566789999996 466666664322   4678999999997776543 45799


Q ss_pred             EEcCCCCCcceEEEEec--cccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         341 LYDPKVKEGAIVKSTFS--SHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       341 iwd~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      +|+.. ++   .+..+.  ........|++.| ++++++ ++.+..|++|..
T Consensus       226 ~f~~~-G~---~~~~~~~~~~~~~p~~vav~~-dG~l~V-~~~n~~v~~fr~  271 (279)
T d1q7fa_         226 IFTQD-GQ---LISALESKVKHAQCFDVALMD-DGSVVL-ASKDYRLYIYRY  271 (279)
T ss_dssp             EECTT-SC---EEEEEEESSCCSCEEEEEEET-TTEEEE-EETTTEEEEEEC
T ss_pred             EECCC-CC---EEEEEeCCCCCCCEeEEEEeC-CCcEEE-EeCCCeEEEEEe
Confidence            99853 33   344443  2234578999999 555555 557899999975

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.04  E-value=3.8e-07  Score=73.65  Aligned_cols=234  Identities=9%  Similarity=0.017  Sum_probs=140.9

Q ss_pred             CCCcEEEEEec--CCEEEEE-ECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCC
Q psy2107         115 HDDWVSAIDFH--NDWILTG-CYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVE  190 (391)
Q Consensus       115 h~~~V~~~~~~--~~~l~t~-~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~  190 (391)
                      +.-.-.+|+++  |+.+++. +..+.+..++..+....... .-......+++   ++++.++++....+.+++++    
T Consensus        12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav---~~~g~i~v~d~~~~~i~~~~----   84 (260)
T d1rwia_          12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAV---DGAGTVYVTDFNNRVVTLAA----   84 (260)
T ss_dssp             SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEE---CTTCCEEEEETTTEEEEECT----
T ss_pred             CcCCCCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceEEEeccCCccCceEEEE---cCCCCEEEeeeeeceeeeee----
Confidence            33344678887  6655554 45578888877443333222 22234567888   77788877776666666654    


Q ss_pred             CCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee
Q psy2107         191 SNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT  270 (391)
Q Consensus       191 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (391)
                      ......+.... ......++++.++++++++-.....+..++......                            ....
T Consensus        85 ~~~~~~~~~~~-~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~----------------------------~~~~  135 (260)
T d1rwia_          85 GSNNQTVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ----------------------------TVLP  135 (260)
T ss_dssp             TCSCCEECCCC-SCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC----------------------------EECC
T ss_pred             eccceeeeeee-eeeecccccccccceeEeecccccccccccccccee----------------------------eeee
Confidence            12222222222 235678999999998877766666677776543211                            0101


Q ss_pred             ecCccCcccEEEeccCCe-EEEEECCCeEEEEecccCceeEEE-ECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         271 LKGHKEAISAVQWTAVDE-IITSSWDHTLKIWDAELGGMKSEI-VGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       271 ~~~~~~~v~~~~~~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      . ........+++.+++. +++...++.|..+|.......... ..-.....+++.++|+++++....+.|..++.....
T Consensus       136 ~-~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~  214 (260)
T d1rwia_         136 F-TGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT  214 (260)
T ss_dssp             C-CSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC
T ss_pred             e-cccCCcceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCe
Confidence            1 1123346788886655 455566788999987654332221 122356789999999988888888889988865432


Q ss_pred             cceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         349 GAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       349 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                         ........-.....|++++ ++.++++-..++.|+..+
T Consensus       215 ---~~~~~~~~~~~P~~i~~d~-~g~l~vad~~~~rI~~i~  251 (260)
T d1rwia_         215 ---STVLPFTGLNTPLAVAVDS-DRTVYVADRGNDRVVKLT  251 (260)
T ss_dssp             ---CEECCCCSCCCEEEEEECT-TCCEEEEEGGGTEEEEEC
T ss_pred             ---EEEEccCCCCCeEEEEEeC-CCCEEEEECCCCEEEEEe
Confidence               1111122334678999999 557788777777777654

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=99.03  E-value=1.2e-07  Score=80.87  Aligned_cols=243  Identities=8%  Similarity=-0.027  Sum_probs=134.3

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcC--CCceEEec-cCCCCCeeEEEEEecCCCCeE--EEEEe-CCCcEEEEeecC
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTR--RGEHKLNI-PGHGGPVKGVAWLYNDGKDAA--FISVS-TDQTAMIWEWKV  189 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~--~~~~~~~~-~~~~~~v~~l~~~~~~~~~~~--l~s~~-~dg~v~iwd~~~  189 (391)
                      .+.-|+++  ++.|+++.. +.+..|.+  ++...... .........+.+   +++++.  ++++. ..++|..+.+..
T Consensus        41 ~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~---~~~~~~~~v~~a~~~~~~v~~~~~~~  116 (365)
T d1jofa_          41 PISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEIVHEASHPIGGHPRANDA---DTNTRAIFLLAAKQPPYAVYANPFYK  116 (365)
T ss_dssp             CCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEEEEEEEEECCSSGGGGCT---TSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred             CCCEEEEcCCCCEEEEEeC-CcEEEEEEeCCCCeEEEeeecCCCCcEEEEE---CCCCCEEEEEEecCCCCEEEEeEccC
Confidence            34457777  667776654 56777766  33322211 112233445555   556663  33322 245555544321


Q ss_pred             CCCce------------eEEEE-EecCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCcccccc
Q psy2107         190 ESNSI------------ECIHV-CRGHERGLETVTVSESRQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKR  255 (391)
Q Consensus       190 ~~~~~------------~~~~~-~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~  255 (391)
                      .....            ..... .......+.++.|+|+|+++++++. ...|.+|+......                 
T Consensus       117 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~-----------------  179 (365)
T d1jofa_         117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE-----------------  179 (365)
T ss_dssp             SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC-----------------
T ss_pred             CCCcceeEeeeecceecCcccCcccCCCCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCCc-----------------
Confidence            11111            11111 1122335789999999998888764 45788887653211                 


Q ss_pred             ccccccCCCCCceee--ecCccCcccEEEeccCCe-E-EEEECCCeEEEEecccCceeEEEEC-----------------
Q psy2107         256 KKEYSSASSRTPLIT--LKGHKEAISAVQWTAVDE-I-ITSSWDHTLKIWDAELGGMKSEIVG-----------------  314 (391)
Q Consensus       256 ~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~-l-~s~~~dg~i~iwd~~~~~~~~~~~~-----------------  314 (391)
                               ......  ..........++|+|++. + ++.-.+++|.+|++..++.......                 
T Consensus       180 ---------~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (365)
T d1jofa_         180 ---------VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPET  250 (365)
T ss_dssp             ---------EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTT
T ss_pred             ---------eeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeecccccccccccccc
Confidence                     001111  112345678899997765 4 3444688999999876653322110                 


Q ss_pred             ---CeeeEEEEECCCCCEEEEeeC------CCcEEEEcCCCCCcce---EEEEeccccCcEEEEEECCC-CCCEEEEeeC
Q psy2107         315 ---NKSFFDVHYSPLSKLVITASA------DKQIRLYDPKVKEGAI---VKSTFSSHKEWVQSVRWSPI-DPQLFVSASF  381 (391)
Q Consensus       315 ---~~~i~~~~~~p~~~~l~~g~~------dg~i~iwd~~~~~~~~---~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~  381 (391)
                         ......+.++|+|++|+++..      .+.|..|++.......   .............+++++|. +..++++...
T Consensus       251 ~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~  330 (365)
T d1jofa_         251 GKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ  330 (365)
T ss_dssp             SSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS
T ss_pred             ccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCC
Confidence               113567899999999887642      2237777765432111   11112223345688999984 4445666678


Q ss_pred             CCcEEEEec
Q psy2107         382 DNSVKLWDL  390 (391)
Q Consensus       382 dg~v~iwdl  390 (391)
                      ++.|.+|++
T Consensus       331 s~~v~v~~~  339 (365)
T d1jofa_         331 EGWLEIYRW  339 (365)
T ss_dssp             SCEEEEEEE
T ss_pred             CCeEEEEEE
Confidence            899999975

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.98  E-value=1.3e-06  Score=70.61  Aligned_cols=215  Identities=12%  Similarity=0.101  Sum_probs=124.2

Q ss_pred             eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC
Q psy2107         137 SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES  215 (391)
Q Consensus       137 ~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  215 (391)
                      .|.|-|.++.....+..+...+..-+|   +|||+.||-... .+...+|........   ...+..+........|+|+
T Consensus        20 ~l~i~d~dG~~~~~l~~~~~~~~sP~w---SPDGk~IAf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~spd   93 (269)
T d2hqsa1          20 ELRVSDYDGYNQFVVHRSPQPLMSPAW---SPDGSKLAYVTFESGRSALVIQTLANGA---VRQVASFPRHNGAPAFSPD   93 (269)
T ss_dssp             EEEEEETTSCSCEEEEEESSCEEEEEE---CTTSSEEEEEECTTSSCEEEEEETTTCC---EEEEECCSSCEEEEEECTT
T ss_pred             EEEEEcCCCCCcEEEecCCCceeeeEE---CCCCCEEEEEEeeccCcceeeeecccCc---eeEEeeeecccccceecCC
Confidence            577778887777777777888999999   889998886544 333344443333332   2334456778889999999


Q ss_pred             CCEEEEEeC-CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-C-eEEEE
Q psy2107         216 RQQFATGGW-DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-D-EIITS  292 (391)
Q Consensus       216 ~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~-~l~s~  292 (391)
                      ++.++.... ++...++......                            .................++.. . .+++.
T Consensus        94 g~~i~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (269)
T d2hqsa1          94 GSKLAFALSKTGSLNLYVMDLAS----------------------------GQIRQVTDGRSNNTEPTWFPDSQNLAFTS  145 (269)
T ss_dssp             SSEEEEEECTTSSCEEEEEETTT----------------------------CCEEECCCCSSCEEEEEECTTSSEEEEEE
T ss_pred             CCeeeEeeecCCccceeeccccc----------------------------ccceeeeeccccccccccccccccceecc
Confidence            998876553 3333333322211                            111122222223333344432 2 34555


Q ss_pred             ECCCe--EEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCC---cEEEEcCCCCCcceEEEEeccccCcEEEEE
Q psy2107         293 SWDHT--LKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADK---QIRLYDPKVKEGAIVKSTFSSHKEWVQSVR  367 (391)
Q Consensus       293 ~~dg~--i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~  367 (391)
                      ..++.  |.+.++..+................|+|+++.++..+.++   .+.+.+.....   .  ....+........
T Consensus       146 ~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~---~--~~~~~~~~~~~p~  220 (269)
T d2hqsa1         146 DQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG---V--QVLSSTFLDETPS  220 (269)
T ss_dssp             CTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC---E--EECCCSSSCEEEE
T ss_pred             cccCCceEeeeecccccceeeecccccccccccccccceeEEEeecCCceeeeEeeccccc---c--eEeecCccccceE
Confidence            55554  5555665554444444445677789999999888765543   34444544332   2  2233555677889


Q ss_pred             ECCCCCCEEEEeeCC--CcEEEEec
Q psy2107         368 WSPIDPQLFVSASFD--NSVKLWDL  390 (391)
Q Consensus       368 ~~~~~~~~l~s~~~d--g~v~iwdl  390 (391)
                      |+||+..++.+....  ..+.+|++
T Consensus       221 ~SPDG~~i~f~s~~~~~~~l~~~~~  245 (269)
T d2hqsa1         221 LAPNGTMVIYSSSQGMGSVLNLVST  245 (269)
T ss_dssp             ECTTSSEEEEEEEETTEEEEEEEET
T ss_pred             ECCCCCEEEEEEcCCCCcEEEEEEC
Confidence            999665544444433  34666665

>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase
family: Methylamine dehydrogenase, H-chain
domain: Methylamine dehydrogenase, H-chain
species: Paracoccus denitrificans [TaxId: 266]

Probab=98.97  E-value=1.3e-09  Score=93.51  Aligned_cols=219  Identities=8%  Similarity=-0.044  Sum_probs=124.8

Q ss_pred             EEEec--CCEEEEEE-CCCeEEEEcCCCc-eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         121 AIDFH--NDWILTGC-YDHSVHIWTRRGE-HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       121 ~~~~~--~~~l~t~~-~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      .++|+  |++++++. .++.+.+||+... ....+..+....    +.|.  ....+++.+.||++.++++.........
T Consensus       128 ~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~----~~~~--~~~~~v~~~~Dg~~~~~~~~~~~~~~~~  201 (368)
T d1mdah_         128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFH----IHPG--AAATHYLGSCPASLAASDLAAAPAAAGI  201 (368)
T ss_dssp             SEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCC----CEEE--ETTEEECCCCTTSCEEEECCSSCCCCEE
T ss_pred             ceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcce----EccC--CCceEEEEcCCCCEEEEEecCCceeeee
Confidence            35665  77776665 5799999999544 444444333322    1121  2346777888999998886533221111


Q ss_pred             E--EEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         197 I--HVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       197 ~--~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                      .  ..+..+...+....+.+++..+.+.  .+.+.+++................                . ........
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~~~  262 (368)
T d1mdah_         202 VGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAAGATMKAAIDGNE----------------S-GRKADNFR  262 (368)
T ss_dssp             CCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSSCCEEECCCCSSC----------------T-HHHHTTEE
T ss_pred             eecccccccccceeecccccCcEEEEec--CCCEEEEeecCCceEEEeeccccc----------------c-eeeeeeec
Confidence            0  1112344455667788887665544  456777776553321100000000                0 00000001


Q ss_pred             cCcccEEEeccC-CeEEEEEC---------CCeEEEEecccCceeEEEECCeeeEEEEECCCCC--EEEEeeCCCcEEEE
Q psy2107         275 KEAISAVQWTAV-DEIITSSW---------DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSK--LVITASADKQIRLY  342 (391)
Q Consensus       275 ~~~v~~~~~~~~-~~l~s~~~---------dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~--~l~~g~~dg~i~iw  342 (391)
                      ......++++++ +.++....         ...|.+||..+++.+..+.....+..++|+|||+  +++++..++.|++|
T Consensus       263 ~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~v~v~  342 (368)
T d1mdah_         263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIY  342 (368)
T ss_dssp             ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred             CCCceeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCcEeEEecCCCceeEEEECCCCCEEEEEEeCCCCeEEEE
Confidence            112234566643 44433322         1359999999999988888777889999999997  34566778999999


Q ss_pred             cCCCCCcceEEEEeccccCcEEEEEE
Q psy2107         343 DPKVKEGAIVKSTFSSHKEWVQSVRW  368 (391)
Q Consensus       343 d~~~~~~~~~~~~~~~h~~~v~~~~~  368 (391)
                      |..+++   .+..+..... .+.|++
T Consensus       343 D~~tgk---~~~~i~~g~~-P~~l~~  364 (368)
T d1mdah_         343 DAASDQ---DQSSVELDKG-PESLSV  364 (368)
T ss_dssp             ESSSCE---EEEECCCCSC-CCEEEC
T ss_pred             ECCCCC---EEEEEECCCC-CCEEEE
Confidence            998876   6666654332 344544

>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl peptidase IV/CD26, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.93  E-value=1.5e-09  Score=96.43  Aligned_cols=150  Identities=12%  Similarity=0.117  Sum_probs=102.2

Q ss_pred             EEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCe
Q psy2107         209 TVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDE  288 (391)
Q Consensus       209 ~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~  288 (391)
                      .+.|.++++++..  .|+.+.+||+.+++....                        ..-..+..|...|.++.|+|++.
T Consensus        21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~~~~~~------------------------~~~~~~~~~~~~i~~~~~SpDg~   74 (470)
T d2bgra1          21 SLRWISDHEYLYK--QENNILVFNAEYGNSSVF------------------------LENSTFDEFGHSINDYSISPDGQ   74 (470)
T ss_dssp             CCEECSSSEEEEE--SSSCEEEEETTTCCEEEE------------------------ECTTTTTTSSSCCCEEEECTTSS
T ss_pred             CCEeCCCCEEEEE--cCCcEEEEECCCCCEEEE------------------------EchhhhhhccCccceeEECCCCC
Confidence            5779999987764  578899999988553110                        00113345667899999998775


Q ss_pred             -EEEEE---------CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc
Q psy2107         289 -IITSS---------WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS  358 (391)
Q Consensus       289 -l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~  358 (391)
                       |+.++         .++.+.+||+.+++..........+....|||||+++|... ++.+++|+...+..   ......
T Consensus        75 ~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~-~~~l~~~~~~~g~~---~~~t~~  150 (470)
T d2bgra1          75 FILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPS---YRITWT  150 (470)
T ss_dssp             EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCC---EECCSC
T ss_pred             EEEEEECCcceeeeccCceEEEEECCCCcccccccCCccccccccccCcceeeEee-cccceEEECCCCce---eeeeec
Confidence             55553         35788999999987655444555788999999999999864 77899999877652   211111


Q ss_pred             ------------------ccCcEEEEEECCCCCCEEEEeeCCCc-EEEEe
Q psy2107         359 ------------------HKEWVQSVRWSPIDPQLFVSASFDNS-VKLWD  389 (391)
Q Consensus       359 ------------------h~~~v~~~~~~~~~~~~l~s~~~dg~-v~iwd  389 (391)
                                        ..+....+.||| +++.|+....|.+ |..|.
T Consensus       151 ~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-DGk~ia~~~~d~~~v~~~~  199 (470)
T d2bgra1         151 GKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIE  199 (470)
T ss_dssp             CBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEE
T ss_pred             cCCCcccccccceeeeeeecCCccccEECC-CCCccceeEecCCcCceEE
Confidence                              223356688999 5556777665533 55554

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.81  E-value=1.2e-05  Score=66.67  Aligned_cols=225  Identities=9%  Similarity=0.077  Sum_probs=133.3

Q ss_pred             cEEEEEec--CCEEEEEECCCeEEEEcCCCceEE-eccCCCCCeeEEEEEecCCCCeEEEEEeCC--CcEEEEeecCCCC
Q psy2107         118 WVSAIDFH--NDWILTGCYDHSVHIWTRRGEHKL-NIPGHGGPVKGVAWLYNDGKDAAFISVSTD--QTAMIWEWKVESN  192 (391)
Q Consensus       118 ~V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~  192 (391)
                      .+..++|+  |+++++-...+.|..|+.++.... ...........+++   ++++.++++...+  ....++.+.....
T Consensus        41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~---~~dG~l~va~~~~~~~~~~i~~~~~~~~  117 (319)
T d2dg1a1          41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKI---HKDGRLFVCYLGDFKSTGGIFAATENGD  117 (319)
T ss_dssp             CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEE---CTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred             CcEeCEECCCCCEEEEECCCCEEEEEECCCCeEEEEEeCCCCCeeEEEE---CCCCCEEEEecCCCccceeEEEEcCCCc
Confidence            34577886  677777778899999998665433 34445567789999   7788877765432  2334444333333


Q ss_pred             ceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q psy2107         193 SIECIHVCRGHERGLETVTVSESRQQFATGGWD------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRT  266 (391)
Q Consensus       193 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (391)
                      .......-..-......+++.++|++.++....      +.+..++.+.                              .
T Consensus       118 ~~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg------------------------------~  167 (319)
T d2dg1a1         118 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF------------------------------R  167 (319)
T ss_dssp             SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS------------------------------C
T ss_pred             eeeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEeccc------------------------------c
Confidence            222221111112356788999999866653221      1233333221                              1


Q ss_pred             ceeeecCccCcccEEEeccCC-eEE-EEECCCeEEEEecccC-ceeEEE--------ECCeeeEEEEECCCCCEEEEeeC
Q psy2107         267 PLITLKGHKEAISAVQWTAVD-EII-TSSWDHTLKIWDAELG-GMKSEI--------VGNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       267 ~~~~~~~~~~~v~~~~~~~~~-~l~-s~~~dg~i~iwd~~~~-~~~~~~--------~~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                      .+..+...-.....++|++++ .|+ +-+..+.|..||+... ......        ........+++.++|++.++...
T Consensus       168 ~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~  247 (319)
T d2dg1a1         168 TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYG  247 (319)
T ss_dssp             CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEET
T ss_pred             eeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCCCEEEEEcC
Confidence            222222222334679999665 454 4466889999997642 221111        11224567999999998888888


Q ss_pred             CCcEEEEcCCCCCcceEEEEec------cccCcEEEEEECCCCCCEEEEe
Q psy2107         336 DKQIRLYDPKVKEGAIVKSTFS------SHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       336 dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      .+.|.+||.. ++   .+..+.      ++...+++++|.+....++++.
T Consensus       248 ~g~V~~~~p~-G~---~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~  293 (319)
T d2dg1a1         248 QGRVLVFNKR-GY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS  293 (319)
T ss_dssp             TTEEEEECTT-SC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred             CCEEEEECCC-Cc---EEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEc
Confidence            9999999964 33   333332      3445688999998554444444

>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: All0351-like
domain: Hypothetical protein All0351 homologue
species: Nostoc punctiforme [TaxId: 272131]

Probab=98.80  E-value=1.6e-06  Score=71.56  Aligned_cols=197  Identities=10%  Similarity=0.015  Sum_probs=127.6

Q ss_pred             CCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         156 GPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       156 ~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      ..+..+++   +++++++++...+++|..|+  ... ..   ..+......+.+++|+++|+++++...++.+..|+...
T Consensus        28 ~~~e~iAv---~pdG~l~vt~~~~~~I~~i~--p~g-~~---~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~   98 (302)
T d2p4oa1          28 TFLENLAS---APDGTIFVTNHEVGEIVSIT--PDG-NQ---QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK   98 (302)
T ss_dssp             CCEEEEEE---CTTSCEEEEETTTTEEEEEC--TTC-CE---EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             CCcCCEEE---CCCCCEEEEeCCCCEEEEEe--CCC-CE---EEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecc
Confidence            35778999   88999999999999888877  222 22   23344567899999999999999988888888888754


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEE-ECCCeEEEEecccCceeEEEEC
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITS-SWDHTLKIWDAELGGMKSEIVG  314 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~  314 (391)
                      ....                         ...+.. .........+.+.+++.++.+ +.++.+..+|...+........
T Consensus        99 ~~~~-------------------------~~~~~~-~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~  152 (302)
T d2p4oa1          99 SDGT-------------------------VETLLT-LPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEH  152 (302)
T ss_dssp             TTSC-------------------------EEEEEE-CTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred             cccc-------------------------eeeccc-cCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecC
Confidence            2210                         001111 123445678888877775554 5678888888877654433322


Q ss_pred             C-----------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCC
Q psy2107         315 N-----------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDN  383 (391)
Q Consensus       315 ~-----------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg  383 (391)
                      .           .....+.+.. +.++++.+..+.|+.++............. ........+++++ +++++++...++
T Consensus       153 ~~~~~~~~~~~~~~~ngi~~~~-~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~pdgia~d~-dG~l~va~~~~~  229 (302)
T d2p4oa1         153 PMLARSNSESVFPAANGLKRFG-NFLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDV-EGNLYGATHIYN  229 (302)
T ss_dssp             GGGSCSSTTCCSCSEEEEEEET-TEEEEEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBT-TCCEEEECBTTC
T ss_pred             CccceeeccCcccccccccccC-CceeeecCCCCeEEeccccccccccccccc-cCCCCCcceEECC-CCCEEEEEcCCC
Confidence            1           1345566653 345556667888888887654322111122 1233467899999 556788887888


Q ss_pred             cEEEEec
Q psy2107         384 SVKLWDL  390 (391)
Q Consensus       384 ~v~iwdl  390 (391)
                      .|..++.
T Consensus       230 ~V~~i~p  236 (302)
T d2p4oa1         230 SVVRIAP  236 (302)
T ss_dssp             CEEEECT
T ss_pred             cEEEECC
Confidence            8888753

>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: TolB, C-terminal domain
family: TolB, C-terminal domain
domain: TolB, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=98.77  E-value=5.6e-06  Score=66.76  Aligned_cols=221  Identities=10%  Similarity=0.037  Sum_probs=130.9

Q ss_pred             CCcccCCCCcEEEEEec--CCEEEEEECCC---eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-CCcE
Q psy2107         109 PLDCILHDDWVSAIDFH--NDWILTGCYDH---SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-DQTA  182 (391)
Q Consensus       109 ~~~~~~h~~~V~~~~~~--~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-dg~v  182 (391)
                      ...+..+...+..-+|+  |+.||-.....   .+.+.+..+.....+..+.+......|   ++++..++.... ++..
T Consensus        31 ~~~l~~~~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---spdg~~i~~~~~~~~~~  107 (269)
T d2hqsa1          31 QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAF---SPDGSKLAFALSKTGSL  107 (269)
T ss_dssp             CEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEE---CTTSSEEEEEECTTSSC
T ss_pred             cEEEecCCCceeeeEECCCCCEEEEEEeeccCcceeeeecccCceeEEeeeeccccccee---cCCCCeeeEeeecCCcc
Confidence            33444566678888898  67777665443   466667777776777778888899999   777887766553 4444


Q ss_pred             EEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEE-eCCCcEEE--EECCCCCCCCCCCCCCCCCcccccccccc
Q psy2107         183 MIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATG-GWDCLLKI--WSADISKERGDPSENGDEGTTSKKRKKEY  259 (391)
Q Consensus       183 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (391)
                      .++.......  .. ..............+++++..++.. ..+|...+  .++...                       
T Consensus       108 ~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~-----------------------  161 (269)
T d2hqsa1         108 NLYVMDLASG--QI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG-----------------------  161 (269)
T ss_dssp             EEEEEETTTC--CE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-----------------------
T ss_pred             ceeecccccc--cc-eeeeeccccccccccccccccceecccccCCceEeeeecccc-----------------------
Confidence            4443322221  22 2222334445566677777655444 44554444  444331                       


Q ss_pred             ccCCCCCceeeecCccCcccEEEeccCCe-EEEE-ECCCeEEEE--ecccCceeEEEECCeeeEEEEECCCCCEEEEeeC
Q psy2107         260 SSASSRTPLITLKGHKEAISAVQWTAVDE-IITS-SWDHTLKIW--DAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA  335 (391)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-l~s~-~~dg~i~iw--d~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~  335 (391)
                             ....+..+........|++++. ++.. ...+...+|  |...+.. .............|+|||+.|+..+.
T Consensus       162 -------~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~p~~SPDG~~i~f~s~  233 (269)
T d2hqsa1         162 -------APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTFLDETPSLAPNGTMVIYSSS  233 (269)
T ss_dssp             -------CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred             -------cceeeecccccccccccccccceeEEEeecCCceeeeEeecccccc-eEeecCccccceEECCCCCEEEEEEc
Confidence                   1222333445566678886654 4444 444555554  4443332 33334445667889999998875543


Q ss_pred             ---CCcEEEEcCCCCCcceEEEEeccccCcEEEEEECC
Q psy2107         336 ---DKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSP  370 (391)
Q Consensus       336 ---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~  370 (391)
                         ...|+++++....    ...+....+.+...+|+|
T Consensus       234 ~~~~~~l~~~~~dg~~----~~~lt~~~g~~~~p~WSP  267 (269)
T d2hqsa1         234 QGMGSVLNLVSTDGRF----KARLPATDGQVKFPAWSP  267 (269)
T ss_dssp             ETTEEEEEEEETTSCC----EEECCCSSSEEEEEEECC
T ss_pred             CCCCcEEEEEECCCCC----EEEEeCCCCcEEeEEeCC
Confidence               3468899987654    235556677788999999

>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Brain tumor cg10719-pa
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.66  E-value=9.1e-06  Score=65.99  Aligned_cols=182  Identities=19%  Similarity=0.235  Sum_probs=125.1

Q ss_pred             CCEEEE-EECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE--e
Q psy2107         126 NDWILT-GCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC--R  201 (391)
Q Consensus       126 ~~~l~t-~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~--~  201 (391)
                      +..+++ .+.++.|..++..+.....+. ........+++   .+++.++++....+.+.+++.     ....+..+  .
T Consensus        82 ~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~p~~~av---d~~G~i~v~~~~~~~~~~~~~-----~g~~~~~~g~~  153 (279)
T d1q7fa_          82 GDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTV---DNKGRIIVVECKVMRVIIFDQ-----NGNVLHKFGCS  153 (279)
T ss_dssp             TEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEE---CTTSCEEEEETTTTEEEEECT-----TSCEEEEEECT
T ss_pred             cccceeccCCccccccccccccceeecCCCcccccceecc---ccCCcEEEEeeccceeeEecc-----CCceeeccccc
Confidence            334443 345568888888887776653 34455678888   777888888777787888762     22334443  3


Q ss_pred             cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeee--cCccCccc
Q psy2107         202 GHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITL--KGHKEAIS  279 (391)
Q Consensus       202 ~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~  279 (391)
                      .+......+++.++++.+++....+.|++||...                              +.+..+  .+......
T Consensus       154 ~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G------------------------------~~~~~~g~~g~~~~P~  203 (279)
T d1q7fa_         154 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG------------------------------QYLRQIGGEGITNYPI  203 (279)
T ss_dssp             TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC------------------------------CEEEEESCTTTSCSEE
T ss_pred             ccccccceeeeccceeEEeeeccccceeeeecCC------------------------------ceeeeecccccccCCc
Confidence            4556788999999999888888889999999753                              122222  12334467


Q ss_pred             EEEeccCCeEEEEE-C-CCeEEEEecccCceeEEEECCe---eeEEEEECCCCCEEEEeeCCCcEEEEcCCCC
Q psy2107         280 AVQWTAVDEIITSS-W-DHTLKIWDAELGGMKSEIVGNK---SFFDVHYSPLSKLVITASADKQIRLYDPKVK  347 (391)
Q Consensus       280 ~~~~~~~~~l~s~~-~-dg~i~iwd~~~~~~~~~~~~~~---~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~  347 (391)
                      .|++.+++.++.+. . ++.|.+|+ .+|+.+.++....   ....+++.|+|.+++ ++.++.|++|.....
T Consensus       204 giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V-~~~n~~v~~fr~~~~  274 (279)
T d1q7fa_         204 GVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVL-ASKDYRLYIYRYVQL  274 (279)
T ss_dssp             EEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEE-EETTTEEEEEECSCC
T ss_pred             ccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEE-EeCCCeEEEEEeeee
Confidence            88998777766664 3 45799998 4688777765432   567899999997655 457899999987653

>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: NHL repeat
family: NHL repeat
domain: Serine/threonine-protein kinase PknD
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.59  E-value=7.8e-06  Score=65.66  Aligned_cols=192  Identities=8%  Similarity=0.014  Sum_probs=115.9

Q ss_pred             CeeEEEEEecCCCCeEEEEE-eCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy2107         157 PVKGVAWLYNDGKDAAFISV-STDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADI  235 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~  235 (391)
                      .-..|++   +++++..++. +..+.+..++..  . .........+ ......++++++++++++....+.+++++-.+
T Consensus        15 ~P~~vav---d~dG~i~v~~~~~~~~i~~~~~~--~-~~~~~~~~~~-~~~p~gvav~~~g~i~v~d~~~~~i~~~~~~~   87 (260)
T d1rwia_          15 SPSGVAV---DSAGNVYVTSEGMYGRVVKLATG--S-TGTTVLPFNG-LYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSN   87 (260)
T ss_dssp             CEEEEEE---CTTCCEEEEECSSSCEEEEEC-------CEEECCCCS-CCSCCCEEECTTCCEEEEETTTEEEEECTTCS
T ss_pred             CCCEEEE---cCCCCEEEEEcCCCCEEEEEcCC--C-ceEEEeccCC-ccCceEEEEcCCCCEEEeeeeeceeeeeeecc
Confidence            3478898   7778866654 455777777632  1 2222222222 23457889999998777766666666554332


Q ss_pred             CCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEE-CCCeEEEEecccCceeEE-EE
Q psy2107         236 SKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSS-WDHTLKIWDAELGGMKSE-IV  313 (391)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~-~~  313 (391)
                      ..                             .+... ........+++.+++.++.+. ....+..++......... ..
T Consensus        88 ~~-----------------------------~~~~~-~~~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~  137 (260)
T d1rwia_          88 NQ-----------------------------TVLPF-DGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT  137 (260)
T ss_dssp             CC-----------------------------EECCC-CSCCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSCEECCCC
T ss_pred             ce-----------------------------eeeee-eeeeecccccccccceeEeeccccccccccccccceeeeeeec
Confidence            11                             11111 112345778888766655553 455566666544332111 12


Q ss_pred             CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEe
Q psy2107         314 GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       314 ~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd  389 (391)
                      .......++++|+++++++...++.|..++.....   ..............|++.+ +++++++....+.|..++
T Consensus       138 ~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~---~~~~~~~~~~~p~gi~~d~-~g~l~vsd~~~~~i~~~~  209 (260)
T d1rwia_         138 GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN---QVVLPFTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLL  209 (260)
T ss_dssp             SCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC---EEECCCSSCCSEEEEEECT-TCCEEEEETTTTEEEEEC
T ss_pred             ccCCcceeeecCCCCEeeeccccccccccccccce---eeeeeccccCCCccceeee-eeeeeeeecCCCEEEEEe
Confidence            22355788999999988888888899999976543   2222234456678999999 567888887788887765

>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Lactonase Drp35
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.57  E-value=0.00011  Score=60.57  Aligned_cols=198  Identities=10%  Similarity=0.078  Sum_probs=117.2

Q ss_pred             CCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC----CcEEE
Q psy2107         155 GGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD----CLLKI  230 (391)
Q Consensus       155 ~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~i  230 (391)
                      ...+..++|   ++++++.++-...++|..|+..  ..  .....+.........++++++|+++++...+    +.+..
T Consensus        39 ~~~lEG~~~---D~~G~Ly~~D~~~g~I~ri~p~--g~--~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~  111 (319)
T d2dg1a1          39 GLQLEGLNF---DRQGQLFLLDVFEGNIFKINPE--TK--EIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA  111 (319)
T ss_dssp             CCCEEEEEE---CTTSCEEEEETTTCEEEEECTT--TC--CEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred             CcCcEeCEE---CCCCCEEEEECCCCEEEEEECC--CC--eEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEE
Confidence            344568899   7788888887788888888732  22  2233334455678899999999987765432    23333


Q ss_pred             EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeec--CccCcccEEEeccCCeEEEEECC-------CeEEEE
Q psy2107         231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLK--GHKEAISAVQWTAVDEIITSSWD-------HTLKIW  301 (391)
Q Consensus       231 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d-------g~i~iw  301 (391)
                      .+.....                             ......  .-......+.+.+++.++.+...       +.+..+
T Consensus       112 ~~~~~~~-----------------------------~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~  162 (319)
T d2dg1a1         112 ATENGDN-----------------------------LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYV  162 (319)
T ss_dssp             ECTTSCS-----------------------------CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEE
T ss_pred             EcCCCce-----------------------------eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEE
Confidence            3333211                             111111  11223567888877877766543       235545


Q ss_pred             ecccCceeEEEECCeeeEEEEECCCCCEE-EEeeCCCcEEEEcCCCCCcce--EE---EEeccccCcEEEEEECCCCCCE
Q psy2107         302 DAELGGMKSEIVGNKSFFDVHYSPLSKLV-ITASADKQIRLYDPKVKEGAI--VK---STFSSHKEWVQSVRWSPIDPQL  375 (391)
Q Consensus       302 d~~~~~~~~~~~~~~~i~~~~~~p~~~~l-~~g~~dg~i~iwd~~~~~~~~--~~---~~~~~h~~~v~~~~~~~~~~~~  375 (391)
                      +...+........-.....++|+|+++.| ++-+..+.|+.|++.......  ..   ............|++.+ ++++
T Consensus       163 ~~dg~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~-~G~l  241 (319)
T d2dg1a1         163 SPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNL  241 (319)
T ss_dssp             CTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCE
T ss_pred             ecccceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcC-CCCE
Confidence            54333322222222245679999999865 454667899999876432111  10   11111223467899998 6678


Q ss_pred             EEEeeCCCcEEEEe
Q psy2107         376 FVSASFDNSVKLWD  389 (391)
Q Consensus       376 l~s~~~dg~v~iwd  389 (391)
                      .++....+.|.+||
T Consensus       242 ~Va~~~~g~V~~~~  255 (319)
T d2dg1a1         242 YVAMYGQGRVLVFN  255 (319)
T ss_dssp             EEEEETTTEEEEEC
T ss_pred             EEEEcCCCEEEEEC
Confidence            88888889999887

>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme
family: 3-carboxy-cis,cis-mucoante lactonizing enzyme
domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme
species: Neurospora crassa [TaxId: 5141]

Probab=98.46  E-value=0.00026  Score=59.52  Aligned_cols=232  Identities=8%  Similarity=-0.002  Sum_probs=121.1

Q ss_pred             EEEEEC--CCeEEEEcC--CCceEE---e-ccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEE
Q psy2107         129 ILTGCY--DHSVHIWTR--RGEHKL---N-IPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVC  200 (391)
Q Consensus       129 l~t~~~--dg~i~iwd~--~~~~~~---~-~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~  200 (391)
                      |+.|++  .+.|.++.+  +...+.   . .......+.-|+|   ++++++|.++.. +.+..|.+..... .......
T Consensus         5 l~vGtyt~~~~i~~~~fd~~~~~l~~~~~~~~~~~~~~s~la~---s~d~~~ly~~~~-~~~~~~~i~~~~~-~~~~~~~   79 (365)
T d1jofa_           5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTF---DHERKNIYGAAM-KKWSSFAVKSPTE-IVHEASH   79 (365)
T ss_dssp             EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEE---CTTSSEEEEEEB-TEEEEEEEEETTE-EEEEEEE
T ss_pred             EEEEeecCCCCEEEEEEcCCCCeEEEeeeeeccCCCCCCEEEE---cCCCCEEEEEeC-CcEEEEEEeCCCC-eEEEeee
Confidence            566765  457766654  333322   1 1234555667888   778888877654 6688888763322 2212111


Q ss_pred             ecCCCCeEEEEEcCCCCEEE--EEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceee-ecCccC
Q psy2107         201 RGHERGLETVTVSESRQQFA--TGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLIT-LKGHKE  276 (391)
Q Consensus       201 ~~~~~~v~~l~~~~~~~~l~--sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  276 (391)
                       ........++++++++.+.  ++. ..+.+..+.+.........           .  .............. ......
T Consensus        80 -~~~~~p~~v~~~~~~~~~~v~~a~~~~~~v~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~q~~~  145 (365)
T d1jofa_          80 -PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNV-----------F--SVSETGKLEKNVQNYEYQENT  145 (365)
T ss_dssp             -ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEE-----------E--EECTTCCEEEEEEEEECCTTC
T ss_pred             -cCCCCcEEEEECCCCCEEEEEEecCCCCEEEEeEccCCCCccee-----------E--eeeecceecCcccCcccCCCC
Confidence             1233456778888887543  322 2456666554321100000           0  00000000000111 111223


Q ss_pred             cccEEEeccCCe-EEEEEC-CCeEEEEecccCc-ee--EEEE---CCeeeEEEEECCCCCEEEEee-CCCcEEEEcCCCC
Q psy2107         277 AISAVQWTAVDE-IITSSW-DHTLKIWDAELGG-MK--SEIV---GNKSFFDVHYSPLSKLVITAS-ADKQIRLYDPKVK  347 (391)
Q Consensus       277 ~v~~~~~~~~~~-l~s~~~-dg~i~iwd~~~~~-~~--~~~~---~~~~i~~~~~~p~~~~l~~g~-~dg~i~iwd~~~~  347 (391)
                      .+.++.|+|++. ++++.. ...|.+|+..... ..  ....   .......++|+|+++++.+.. .++.|.+|++...
T Consensus       146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~  225 (365)
T d1jofa_         146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA  225 (365)
T ss_dssp             CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred             cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence            467899997775 555543 4578888765432 22  1121   234678899999999875544 5789999998665


Q ss_pred             CcceEEE--Eec--------------cccCcEEEEEECCCCCCEEEEe
Q psy2107         348 EGAIVKS--TFS--------------SHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       348 ~~~~~~~--~~~--------------~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      .......  ...              .+......+.++|++..++++.
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsn  273 (365)
T d1jofa_         226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS  273 (365)
T ss_dssp             TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred             CceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEc
Confidence            4322111  110              1223466889999555444443

>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP)
species: Squid (Loligo vulgaris) [TaxId: 6622]

Probab=98.42  E-value=5.2e-05  Score=62.46  Aligned_cols=198  Identities=9%  Similarity=0.120  Sum_probs=120.5

Q ss_pred             EEEEEec--CCEEEEEECCCeEEEEcCCCceEEeccCCC-----CCeeEEEEEecCCCCeEEEEEeCC------------
Q psy2107         119 VSAIDFH--NDWILTGCYDHSVHIWTRRGEHKLNIPGHG-----GPVKGVAWLYNDGKDAAFISVSTD------------  179 (391)
Q Consensus       119 V~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-----~~v~~l~~~~~~~~~~~l~s~~~d------------  179 (391)
                      -..++|+  ++.++++...+.|...+.++.....+....     ...+.+++   ++++.+.++-...            
T Consensus        73 P~Gl~~~~dg~~l~vad~~~~i~~~~~~g~~~~~~~~~~~g~~~~~pndl~~---d~~G~lyvtd~~~~~~~~~~~~~~~  149 (314)
T d1pjxa_          73 PAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAF---DYEGNLWITAPAGEVAPADYTRSMQ  149 (314)
T ss_dssp             EEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEE---CTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred             ceeEEEeCCCCEEEEEECCCeEEEEeCCCcEEEEEeccccccccCCCcEEEE---CCCCCEEEecCccCcccccccceec
Confidence            4567887  667888877778888898776554433211     12467888   7788877764221            


Q ss_pred             -CcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCC-----EEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCcccc
Q psy2107         180 -QTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQ-----QFATGGWDCLLKIWSADISKERGDPSENGDEGTTSK  253 (391)
Q Consensus       180 -g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-----~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~  253 (391)
                       ..=++|.+.... ....  . ...-..-..++|+|++.     ++++-+..+.|..||+.......             
T Consensus       150 ~~~G~v~~~~~dg-~~~~--~-~~~~~~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~-------------  212 (314)
T d1pjxa_         150 EKFGSIYCFTTDG-QMIQ--V-DTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE-------------  212 (314)
T ss_dssp             SSCEEEEEECTTS-CEEE--E-EEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE-------------
T ss_pred             cCCceEEEEeecC-ceeE--e-eCCcceeeeeEECCCCCcceeEEEEEeecccceEEeeccCccccc-------------
Confidence             111344333222 2111  1 11223456889988764     44555677889888875321100             


Q ss_pred             ccccccccCCCCCceeeecC-ccCcccEEEeccCCeEEE-EECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCC-E
Q psy2107         254 KRKKEYSSASSRTPLITLKG-HKEAISAVQWTAVDEIIT-SSWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSK-L  329 (391)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~-~  329 (391)
                                ..+....+.. +......+++..++.|+. ....+.|.+||.+.+.....+..+ ....+++|.|+++ +
T Consensus       213 ----------~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~l  282 (314)
T d1pjxa_         213 ----------NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTI  282 (314)
T ss_dssp             ----------EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEE
T ss_pred             ----------eeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEE
Confidence                      0011112221 122345788886666554 456789999999888887777765 4678999999987 5


Q ss_pred             EEEeeCCCcEEEEcCCC
Q psy2107         330 VITASADKQIRLYDPKV  346 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~  346 (391)
                      +++.+.+|.|..+++..
T Consensus       283 yVt~~~~g~i~~~~~~~  299 (314)
T d1pjxa_         283 FVTEHENNAVWKFEWQR  299 (314)
T ss_dssp             EEEETTTTEEEEEECSS
T ss_pred             EEEECCCCcEEEEECCC
Confidence            56667788888888754

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.20  E-value=0.00088  Score=54.31  Aligned_cols=214  Identities=8%  Similarity=-0.027  Sum_probs=126.6

Q ss_pred             CEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecC--C
Q psy2107         127 DWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGH--E  204 (391)
Q Consensus       127 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~  204 (391)
                      .++.+--..+.|.-||..+.....+. ....+.++++   .+++.++++ +.+ .+..+|.  .+...+.+......  .
T Consensus        31 ~l~wvDi~~~~I~r~d~~~g~~~~~~-~~~~~~~i~~---~~dg~l~va-~~~-gl~~~d~--~tg~~~~l~~~~~~~~~  102 (295)
T d2ghsa1          31 TAWWFNILERELHELHLASGRKTVHA-LPFMGSALAK---ISDSKQLIA-SDD-GLFLRDT--ATGVLTLHAELESDLPG  102 (295)
T ss_dssp             EEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEE---EETTEEEEE-ETT-EEEEEET--TTCCEEEEECSSTTCTT
T ss_pred             EEEEEECCCCEEEEEECCCCeEEEEE-CCCCcEEEEE---ecCCCEEEE-EeC-ccEEeec--ccceeeEEeeeecCCCc
Confidence            34455456788888998666555433 3456788888   446666654 444 4778884  34443333322211  2


Q ss_pred             CCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccE
Q psy2107         205 RGLETVTVSESRQQFATGGWD----CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISA  280 (391)
Q Consensus       205 ~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~  280 (391)
                      ..+..+.+.|+|++.++....    +.-.+|.+..++                              +..+...-..-..
T Consensus       103 ~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~------------------------------~~~~~~~~~~~Ng  152 (295)
T d2ghsa1         103 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK------------------------------VTKLFADISIPNS  152 (295)
T ss_dssp             EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE------------------------------EEEEEEEESSEEE
T ss_pred             ccceeeEECCCCCEEEEeccccccccceeEeeecCCc------------------------------EEEEeeccCCcce
Confidence            257888999999866654321    233444443211                              1111112233467


Q ss_pred             EEeccCCe--EEEEECCCeEEEEecccC------ceeEEEE---CCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCc
Q psy2107         281 VQWTAVDE--IITSSWDHTLKIWDAELG------GMKSEIV---GNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEG  349 (391)
Q Consensus       281 ~~~~~~~~--l~s~~~dg~i~iwd~~~~------~~~~~~~---~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~  349 (391)
                      ++|++++.  +++-+..+.|..|++...      +......   .......+++..+|++.++.-..+.|..||.. ++ 
T Consensus       153 ~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~-G~-  230 (295)
T d2ghsa1         153 ICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GN-  230 (295)
T ss_dssp             EEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CC-
T ss_pred             eeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC-Cc-
Confidence            88886553  455567888998886421      1111122   12357789999999988887778899999964 33 


Q ss_pred             ceEEEEeccccCcEEEEEEC-CCCCCEEEEeeCC
Q psy2107         350 AIVKSTFSSHKEWVQSVRWS-PIDPQLFVSASFD  382 (391)
Q Consensus       350 ~~~~~~~~~h~~~v~~~~~~-~~~~~~l~s~~~d  382 (391)
                        .+..+.--...+++++|- |+...+++|.+..
T Consensus       231 --~~~~i~lP~~~~T~~~FGG~d~~~LyvTta~~  262 (295)
T d2ghsa1         231 --HIARYEVPGKQTTCPAFIGPDASRLLVTSARE  262 (295)
T ss_dssp             --EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred             --EeeEecCCCCceEEEEEeCCCCCEEEEEECCc
Confidence              444444334569999995 5455677776543

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=98.15  E-value=0.00019  Score=57.60  Aligned_cols=217  Identities=9%  Similarity=0.045  Sum_probs=111.3

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeC-C---CcEEEEeecCCCCceeEEEEE-
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVST-D---QTAMIWEWKVESNSIECIHVC-  200 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~-d---g~v~iwd~~~~~~~~~~~~~~-  200 (391)
                      |+.++-.+ +|.|.+.|+.+.....+..+.+.+...+|   +|+|+.||.... +   ....+|-+.........+... 
T Consensus        12 G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~---SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~   87 (281)
T d1k32a2          12 GDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARF---FPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFS   87 (281)
T ss_dssp             TTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEE---CTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCC
T ss_pred             CCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEE---CCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecC
Confidence            77766554 46788889988777888878888999999   788988875532 2   223455444444333222111 


Q ss_pred             ---ecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCCCCCCCCCCCCCCccccccccccc-----------
Q psy2107         201 ---RGHERGLETVTVSESRQQFATGGWD------CLLKIWSADISKERGDPSENGDEGTTSKKRKKEYS-----------  260 (391)
Q Consensus       201 ---~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  260 (391)
                         ...........|+|+++.|+.....      ..+...+............................           
T Consensus        88 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (281)
T d1k32a2          88 GKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGY  167 (281)
T ss_dssp             EEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTC
T ss_pred             CCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCceeEEecCCccceeeecCCCeEEEeeccccceeeee
Confidence               1122345678899999988765332      23445555443322111100000000000000000           


Q ss_pred             -cCC--------CCCceeeecCccCcccEEEeccCCeEEEEECCC--eEEEEecccCceeEEEECCeeeEEEEECCCCCE
Q psy2107         261 -SAS--------SRTPLITLKGHKEAISAVQWTAVDEIITSSWDH--TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKL  329 (391)
Q Consensus       261 -~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~  329 (391)
                       ...        ...................+.++..+.....++  .|.++|+..+.... +..........|+|+|+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~-lt~~~~~~~~~~SpDG~~  246 (281)
T d1k32a2         168 RGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRK-HTSFTDYYPRHLNTDGRR  246 (281)
T ss_dssp             CSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEE-CCCCCSSCEEEEEESSSC
T ss_pred             ccCCcceeeeeccccceeeccCCccccceeeeeccccceecccccccceEEEeCCCCceEE-eecCCCcccccCcCCCCE
Confidence             000        000011111122223334444443344443333  56677776655433 332333333468999998


Q ss_pred             EEEeeCCCcEEEEcCCCCC
Q psy2107         330 VITASADKQIRLYDPKVKE  348 (391)
Q Consensus       330 l~~g~~dg~i~iwd~~~~~  348 (391)
                      |+.. .++.|+++|+.+++
T Consensus       247 I~f~-~~~~l~~~d~~~g~  264 (281)
T d1k32a2         247 ILFS-KGGSIYIFNPDTEK  264 (281)
T ss_dssp             EEEE-ETTEEEEECTTTCC
T ss_pred             EEEE-eCCEEEEEECCCCC
Confidence            8764 47889999998766

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.89  E-value=0.00024  Score=61.85  Aligned_cols=138  Identities=8%  Similarity=0.041  Sum_probs=83.1

Q ss_pred             CCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEec-CCCCeEEEEEcCCCCEEEEEe---------CCCcEEEEECCCC
Q psy2107         167 DGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRG-HERGLETVTVSESRQQFATGG---------WDCLLKIWSADIS  236 (391)
Q Consensus       167 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~sg~---------~dg~i~iwd~~~~  236 (391)
                      .+++.++. -..+|.+.+||...  +....+..... ....+....|+||+++++.+.         ..+.+.++|+.++
T Consensus        25 ~~~~~~~~-~~~~g~i~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~  101 (465)
T d1xfda1          25 ISDTEFIY-REQKGTVRLWNVET--NTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG  101 (465)
T ss_dssp             SSSSCBCC-CCSSSCEEEBCGGG--CCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred             eCCCcEEE-EeCCCcEEEEECCC--CCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCC
Confidence            33444443 35678899998653  22222222111 223677888999999988764         3467888998764


Q ss_pred             CCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCceeEEEECCe
Q psy2107         237 KERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGGMKSEIVGNK  316 (391)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~  316 (391)
                      ...                           .+.........+....|+|++.-++=..++.|.+.+...+...+......
T Consensus       102 ~~~---------------------------~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~~~~~~~~~~~lt~~g~  154 (465)
T d1xfda1         102 DPQ---------------------------SLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGK  154 (465)
T ss_dssp             CCE---------------------------ECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCB
T ss_pred             cee---------------------------eccCccCCccccceeeeccCCceEEEEecceEEEEecCCCceEEEecccC
Confidence            431                           12112223344566788987763333457788888887766554443221


Q ss_pred             -------------------eeEEEEECCCCCEEEEee
Q psy2107         317 -------------------SFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       317 -------------------~i~~~~~~p~~~~l~~g~  334 (391)
                                         .-..+-|||||++||...
T Consensus       155 ~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~  191 (465)
T d1xfda1         155 EGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA  191 (465)
T ss_dssp             TTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred             cceeeccccchhhhhhhccccceEEECCCCCeEEEEE
Confidence                               114677999999998864

>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: SGL-like
domain: Regucalcin
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=97.88  E-value=0.0039  Score=50.34  Aligned_cols=192  Identities=9%  Similarity=-0.007  Sum_probs=116.2

Q ss_pred             EEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCC
Q psy2107         160 GVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKER  239 (391)
Q Consensus       160 ~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~  239 (391)
                      ...|.+  .++.+..+--..+.|..||..  ++..   ..+. ....+.++++.+++.++++ +.+ .|..+|..+++..
T Consensus        22 gp~wd~--~~~~l~wvDi~~~~I~r~d~~--~g~~---~~~~-~~~~~~~i~~~~dg~l~va-~~~-gl~~~d~~tg~~~   91 (295)
T d2ghsa1          22 GPTFDP--ASGTAWWFNILERELHELHLA--SGRK---TVHA-LPFMGSALAKISDSKQLIA-SDD-GLFLRDTATGVLT   91 (295)
T ss_dssp             EEEEET--TTTEEEEEEGGGTEEEEEETT--TTEE---EEEE-CSSCEEEEEEEETTEEEEE-ETT-EEEEEETTTCCEE
T ss_pred             CCeEEC--CCCEEEEEECCCCEEEEEECC--CCeE---EEEE-CCCCcEEEEEecCCCEEEE-EeC-ccEEeecccceee
Confidence            345632  245555555567788888743  3221   2222 2457889999999876654 554 5888998764421


Q ss_pred             CCCCCCCCCCccccccccccccCCCCCceeeecC--ccCcccEEEeccCCeEEEEEC-----CCeEEEEecccCceeEEE
Q psy2107         240 GDPSENGDEGTTSKKRKKEYSSASSRTPLITLKG--HKEAISAVQWTAVDEIITSSW-----DHTLKIWDAELGGMKSEI  312 (391)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~  312 (391)
                                                 .+.....  ....+..+.+.+++.+..++.     .+.-.+|.+..++.....
T Consensus        92 ---------------------------~l~~~~~~~~~~~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~  144 (295)
T d2ghsa1          92 ---------------------------LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLF  144 (295)
T ss_dssp             ---------------------------EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEE
T ss_pred             ---------------------------EEeeeecCCCcccceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEe
Confidence                                       1111111  122466777888887776653     234566777777655555


Q ss_pred             ECCeeeEEEEECCCCCEEE-EeeCCCcEEEEcCCCCCc-----ceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEE
Q psy2107         313 VGNKSFFDVHYSPLSKLVI-TASADKQIRLYDPKVKEG-----AIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVK  386 (391)
Q Consensus       313 ~~~~~i~~~~~~p~~~~l~-~g~~dg~i~iwd~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~  386 (391)
                      ........++|+++++.+. +-+..+.|+.|++.....     ........+-.+....+++.. ++++.++.-..+.|.
T Consensus       145 ~~~~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~-~GnlWva~~~~g~V~  223 (295)
T d2ghsa1         145 ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA-EGHIWNARWGEGAVD  223 (295)
T ss_dssp             EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT-TSCEEEEEETTTEEE
T ss_pred             eccCCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcC-CCCEEeeeeCCCceE
Confidence            4434567899999998554 555678899888643211     122233444556688899988 556666665667788


Q ss_pred             EEe
Q psy2107         387 LWD  389 (391)
Q Consensus       387 iwd  389 (391)
                      .||
T Consensus       224 ~~d  226 (295)
T d2ghsa1         224 RYD  226 (295)
T ss_dssp             EEC
T ss_pred             Eec
Confidence            876

>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: DPP6 N-terminal domain-like
family: DPP6 N-terminal domain-like
domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=0.00062  Score=59.16  Aligned_cols=100  Identities=7%  Similarity=-0.081  Sum_probs=62.1

Q ss_pred             EECCCeEEEEcCCCceEEe-ccC---CCCCeeEEEEEecCCCCeEEEEEe---------CCCcEEEEeecCCCCceeEEE
Q psy2107         132 GCYDHSVHIWTRRGEHKLN-IPG---HGGPVKGVAWLYNDGKDAAFISVS---------TDQTAMIWEWKVESNSIECIH  198 (391)
Q Consensus       132 ~~~dg~i~iwd~~~~~~~~-~~~---~~~~v~~l~~~~~~~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~  198 (391)
                      -..+|.|.+||+.+..... +..   ....+....|   ++++++++...         ..+.+.++|+.  .+....+.
T Consensus        33 ~~~~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~--~~~~~~l~  107 (465)
T d1xfda1          33 REQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEI---SPDREYALFSYNVEPIYQHSYTGYYVLSKIP--HGDPQSLD  107 (465)
T ss_dssp             CCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEE---CTTSSEEEEEESCCCCSSSCCCSEEEEEESS--SCCCEECC
T ss_pred             EeCCCcEEEEECCCCCEEEEEcCccccccccceeEE---CCCCCeEEEEEcccceeEeeccccEEEEEcc--CCceeecc
Confidence            3456789999984322221 211   2235667778   77888877654         35677888854  33333333


Q ss_pred             EEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy2107         199 VCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISK  237 (391)
Q Consensus       199 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~  237 (391)
                      ........+....|+|+|+.||-.. ++.|.+.+..++.
T Consensus       108 ~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~  145 (465)
T d1xfda1         108 PPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQ  145 (465)
T ss_dssp             CTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSC
T ss_pred             CccCCccccceeeeccCCceEEEEe-cceEEEEecCCCc
Confidence            2223344566688999999988765 5678888876544

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=97.03  E-value=0.011  Score=49.17  Aligned_cols=94  Identities=11%  Similarity=0.150  Sum_probs=64.1

Q ss_pred             eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC--------------------------------------Cc
Q psy2107         297 TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD--------------------------------------KQ  338 (391)
Q Consensus       297 ~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d--------------------------------------g~  338 (391)
                      .+.++|..+.+....+........+.++++|+++++.+.+                                      +.
T Consensus       174 ~~t~ID~~tm~V~~QV~V~g~ld~~~~s~dGK~af~TsyNSE~g~~l~e~ta~e~D~i~V~n~~rie~av~~Gk~~eing  253 (459)
T d1fwxa2         174 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG  253 (459)
T ss_dssp             EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred             EEEEEecCCceEEEEeeeCCChhccccCCCCCEEEEEeccccCCcchhhcccccceEEEEechHHhHHhhhcCCcEEeCC
Confidence            4678899988888888777777889999999999887643                                      22


Q ss_pred             EEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         339 IRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       339 i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      +.+-|.+..........+... .....+..+||+.++++++..+.++.|.|++
T Consensus       254 V~VVD~~~~~~~~v~~yIPVp-KsPHGV~vSPDGKyi~VaGKLs~tVSViD~~  305 (459)
T d1fwxa2         254 VKVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT  305 (459)
T ss_dssp             EEEEECSGG--CSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred             ceeecccccCCcceeEEEecC-CCCCceEECCCCCEEEEeCCcCCcEEEEEeh
Confidence            333443321111122222222 2356789999888888888899999999974

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.85  E-value=0.07  Score=41.93  Aligned_cols=219  Identities=12%  Similarity=0.090  Sum_probs=133.8

Q ss_pred             CCEEEEEECCCeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCC-
Q psy2107         126 NDWILTGCYDHSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHE-  204 (391)
Q Consensus       126 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-  204 (391)
                      .+.||.=+ ..++.|+|++.+....-.....+|.--.|.    +.+.|+..+ +..|.-|+++.   ...+...+..|. 
T Consensus        74 ~~IiALra-g~~LQiFnletK~klks~~~~e~VvfWkWi----s~~~L~lVT-~taVYHW~~~g---~s~P~k~fdR~~~  144 (327)
T d1utca2          74 SKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWI----SLNTVALVT-DNAVYHWSMEG---ESQPVKMFDRHSS  144 (327)
T ss_dssp             SSEEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEES----SSSEEEEEC-SSEEEEEESSS---SCCCEEEEECCGG
T ss_pred             CcEEEEec-CCeEEEEehhHhhhhceEEcCCCcEEEEec----CCCEEEEEc-CCceEEEcccC---CCCchhhhhhccc
Confidence            44555444 568999999766555444456678777884    223444443 56799999642   224566666654 


Q ss_pred             ---CCeEEEEEcCCCCEEEEEe---C----CCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCc
Q psy2107         205 ---RGLETVTVSESRQQFATGG---W----DCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGH  274 (391)
Q Consensus       205 ---~~v~~l~~~~~~~~l~sg~---~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (391)
                         ..|-.-..+++.++++..|   .    .|.+.+|..+.                              +.-+.+.+|
T Consensus       145 L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er------------------------------~~sQ~ieGh  194 (327)
T d1utca2         145 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR------------------------------KVSQPIEGH  194 (327)
T ss_dssp             GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT------------------------------TEEEEECCS
T ss_pred             ccCceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEecc------------------------------CcCccccce
Confidence               3566677788888776433   2    36788888763                              345567777


Q ss_pred             cCcccEEEeccC----CeEEEE---ECCCeEEEEecccCc---e---eEEEE----C---CeeeEEEEECCCCCEEEEee
Q psy2107         275 KEAISAVQWTAV----DEIITS---SWDHTLKIWDAELGG---M---KSEIV----G---NKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       275 ~~~v~~~~~~~~----~~l~s~---~~dg~i~iwd~~~~~---~---~~~~~----~---~~~i~~~~~~p~~~~l~~g~  334 (391)
                      ......+.....    ..++.+   ...+.++|.++....   .   .+...    .   ..=..++..++....+..-+
T Consensus       195 aa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviT  274 (327)
T d1utca2         195 AASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT  274 (327)
T ss_dssp             EEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEE
T ss_pred             eeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCCcceeEEEECCccccCCcEEEEEeeccCCEEEEEe
Confidence            665555544411    122222   233688888886521   1   11111    1   11235678888888888888


Q ss_pred             CCCcEEEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEE
Q psy2107         335 ADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKL  387 (391)
Q Consensus       335 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i  387 (391)
                      .-|.|++||+.++.   ++..-+-...+|...+-+...+ =++....+|.|.-
T Consensus       275 K~G~i~lyDleTgt---~i~~nRIs~~~iF~~a~~~~~~-Gi~~VNr~GqVl~  323 (327)
T d1utca2         275 KYGYIHLYDLETGT---CIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLS  323 (327)
T ss_dssp             TTSEEEEEETTTCC---EEEEEECCSSCEEEEEEETTTT-EEEEEETTSEEEE
T ss_pred             cCcEEEEEEccccc---EEEEeecCCCceEEeccCCCCc-eEEEECCCCeEEE
Confidence            99999999999987   5555555566676555554233 3566667777653

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.078  Score=41.55  Aligned_cols=220  Identities=9%  Similarity=-0.086  Sum_probs=121.3

Q ss_pred             CeEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEcCC
Q psy2107         136 HSVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVSES  215 (391)
Q Consensus       136 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~  215 (391)
                      ..|+-.++++.....+......+.+++|.+.  .+.+..+-..++.|.-.+++..................+..|++.+.
T Consensus        10 ~~I~~~~l~~~~~~~~~~~~~~~~~id~d~~--~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~   87 (266)
T d1ijqa1          10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI   87 (266)
T ss_dssp             SSEEEEETTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred             CeEEEEECCCCcceeeeCCCCceEEEEEEeC--CCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeec
Confidence            3577788866555555445566778998432  34444554456666665543211111112222333456778999876


Q ss_pred             CCEEEEE-eCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEecc-CCeEEEEE
Q psy2107         216 RQQFATG-GWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTA-VDEIITSS  293 (391)
Q Consensus       216 ~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~l~s~~  293 (391)
                      +..|... ...+.|.+.+++...                             ....+.........++.+| .+.++...
T Consensus        88 ~~~lY~~d~~~~~I~v~~~~g~~-----------------------------~~~~~~~~~~~P~~l~vd~~~g~ly~~~  138 (266)
T d1ijqa1          88 HSNIYWTDSVLGTVSVADTKGVK-----------------------------RKTLFRENGSKPRAIVVDPVHGFMYWTD  138 (266)
T ss_dssp             TTEEEEEETTTTEEEEEETTSSS-----------------------------EEEEEECTTCCEEEEEEETTTTEEEEEE
T ss_pred             cceEEEEecCCCEEEeEecCCce-----------------------------EEEEEcCCCCCcceEEEEcccCeEEEec
Confidence            6555544 456789999986422                             2222333344567788874 56655543


Q ss_pred             --CCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCCcceEEEEeccccCcEEEEEEC
Q psy2107         294 --WDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKEGAIVKSTFSSHKEWVQSVRWS  369 (391)
Q Consensus       294 --~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~  369 (391)
                        ..+.|.-.++............ .....+++.+.++.|..+ ...+.|...++...... .+...........++++.
T Consensus       139 ~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~-~~~~~~~~~~~p~~lav~  217 (266)
T d1ijqa1         139 WGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPFSLAVF  217 (266)
T ss_dssp             CSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTTTSSEEEEEEE
T ss_pred             cCCCcceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEE-EEEeCCCcccccEEEEEE
Confidence              3345655665433332222222 356789999887766554 55678988888654322 222223333446677775


Q ss_pred             CCCCCEEEEeeCCCcEEEEe
Q psy2107         370 PIDPQLFVSASFDNSVKLWD  389 (391)
Q Consensus       370 ~~~~~~l~s~~~dg~v~iwd  389 (391)
                        ++.++.+-..++.|...+
T Consensus       218 --~~~ly~td~~~~~I~~~~  235 (266)
T d1ijqa1         218 --EDKVFWTDIINEAIFSAN  235 (266)
T ss_dssp             --TTEEEEEETTTTEEEEEE
T ss_pred             --CCEEEEEECCCCeEEEEE
Confidence              345666655666666554

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=96.58  E-value=0.12  Score=42.81  Aligned_cols=109  Identities=14%  Similarity=0.168  Sum_probs=66.4

Q ss_pred             EecCCEEEEEECCC-----------eEEEEcCCCceE---E-eccCCCCCeeEEEEEecCCCCeEEEEEeCC-CcEEEEe
Q psy2107         123 DFHNDWILTGCYDH-----------SVHIWTRRGEHK---L-NIPGHGGPVKGVAWLYNDGKDAAFISVSTD-QTAMIWE  186 (391)
Q Consensus       123 ~~~~~~l~t~~~dg-----------~i~iwd~~~~~~---~-~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-g~v~iwd  186 (391)
                      ..+++.++.|+.+.           .+.+||.....-   . ....+.......++   ..++.+++.|+.+ ..+.+||
T Consensus        28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~---~~~g~i~v~Gg~~~~~~~~yd  104 (387)
T d1k3ia3          28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM---DGNGQIVVTGGNDAKKTSLYD  104 (387)
T ss_dssp             TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE---CTTSCEEEECSSSTTCEEEEE
T ss_pred             eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEE---ecCCcEEEeecCCCcceeEec
Confidence            33577888787531           377899843221   1 12233333445566   5688888888765 5899999


Q ss_pred             ecCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCC
Q psy2107         187 WKVESNSIECIHVCRGHERGLETVTVSESRQQFATGGWD------CLLKIWSADISK  237 (391)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~  237 (391)
                      ..  ...+......... ..-.+.+..+++++++.|+.+      ..+.+||..+.+
T Consensus       105 ~~--~~~w~~~~~~~~~-r~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         105 SS--SDSWIPGPDMQVA-RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             GG--GTEEEECCCCSSC-CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             Cc--cCccccccccccc-ccccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            54  4444433333222 223456777899999988753      358889987643

>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Tricorn protease N-terminal domain
family: Tricorn protease N-terminal domain
domain: Tricorn protease N-terminal domain
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=96.55  E-value=0.0081  Score=47.56  Aligned_cols=84  Identities=11%  Similarity=0.147  Sum_probs=52.8

Q ss_pred             CCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeC-C-----CcEEEEcCCCCCcceEEE---EeccccCcEE
Q psy2107         294 WDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASA-D-----KQIRLYDPKVKEGAIVKS---TFSSHKEWVQ  364 (391)
Q Consensus       294 ~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~-d-----g~i~iwd~~~~~~~~~~~---~~~~h~~~v~  364 (391)
                      .++.|.+.|+..++..+...........+|||||+.||.... +     ..|.+++...++...+..   ..........
T Consensus        19 ~~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~~lt~~~~~~~~~~~~~~   98 (281)
T d1k32a2          19 CCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTD   98 (281)
T ss_dssp             ETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEECCCCCEEEETTEECSE
T ss_pred             eCCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceEEeeecCCCccCcccccc
Confidence            456788889998887655556668888999999998886532 2     247777766554211100   0011223457


Q ss_pred             EEEECCCCCCEEEE
Q psy2107         365 SVRWSPIDPQLFVS  378 (391)
Q Consensus       365 ~~~~~~~~~~~l~s  378 (391)
                      ..+|+|++ +.++.
T Consensus        99 ~~~~spdg-~~l~~  111 (281)
T d1k32a2          99 VAGFDPDG-NLIIS  111 (281)
T ss_dssp             EEEECTTC-CEEEE
T ss_pred             ccccCCCC-CEEEE
Confidence            78899955 44544

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.17  E-value=0.19  Score=39.10  Aligned_cols=214  Identities=13%  Similarity=0.093  Sum_probs=118.7

Q ss_pred             CcEEEEEec--CCEEE-EEECCCeEEEEcCCCceEEecc-CCCCCeeEEEEEecCC-CCeEEEEEeCCCcEEEEeecCCC
Q psy2107         117 DWVSAIDFH--NDWIL-TGCYDHSVHIWTRRGEHKLNIP-GHGGPVKGVAWLYNDG-KDAAFISVSTDQTAMIWEWKVES  191 (391)
Q Consensus       117 ~~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~  191 (391)
                      ..+.+++|+  .+.++ +-..++.|+..++++.....+. .....+.++++   +. .+.+..+-...+.|.+.+++  .
T Consensus        36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAv---D~~~~~lY~~d~~~~~I~~~~~d--g  110 (263)
T d1npea_          36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIAL---DHLGRTIFWTDSQLDRIEVAKMD--G  110 (263)
T ss_dssp             EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEE---ETTTTEEEEEETTTTEEEEEETT--S
T ss_pred             CcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCCcEEEEEeccccccEEEE---eccCCeEEEeccCCCEEEEEecC--C
Confidence            356778886  45444 4456688888888655444332 23356788888   43 44455566667889888854  2


Q ss_pred             CceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCC-CcEEEE--ECCCCCCCCCCCCCCCCCccccccccccccCCCCCce
Q psy2107         192 NSIECIHVCRGHERGLETVTVSESRQQFATGGWD-CLLKIW--SADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPL  268 (391)
Q Consensus       192 ~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-g~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (391)
                      .....  .+.........++++|...++...... +..+|+  +++...                             ..
T Consensus       111 ~~~~~--l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~-----------------------------~~  159 (263)
T d1npea_         111 TQRRV--LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-----------------------------RR  159 (263)
T ss_dssp             CSCEE--EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-----------------------------CE
T ss_pred             ceEEE--EecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCC-----------------------------ce
Confidence            22222  223334578899999977666544322 233344  443211                             11


Q ss_pred             eeecCccCcccEEEec-cCCeEEEE-ECCCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCC
Q psy2107         269 ITLKGHKEAISAVQWT-AVDEIITS-SWDHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKV  346 (391)
Q Consensus       269 ~~~~~~~~~v~~~~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~  346 (391)
                      ......-.....+++. ..++|+.+ ...+.|...|+........+..-.....+++. .+.+..+-...+.|...|..+
T Consensus       160 ~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~~~P~~lav~-~~~lYwtd~~~~~I~~~~~~~  238 (263)
T d1npea_         160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAI  238 (263)
T ss_dssp             EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred             eeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCCCCcEEEEEE-CCEEEEEECCCCEEEEEECCC
Confidence            1122222345678887 45666555 45778988888765544444443334567775 333444444567888888765


Q ss_pred             CCcceEEEEe-ccccCcEEEEEECC
Q psy2107         347 KEGAIVKSTF-SSHKEWVQSVRWSP  370 (391)
Q Consensus       347 ~~~~~~~~~~-~~h~~~v~~~~~~~  370 (391)
                      ++   ....+ .........++..+
T Consensus       239 g~---~~~~~~~~~~~~~~gi~v~~  260 (263)
T d1npea_         239 SK---EMDTFHPHKQTRLYGITIAL  260 (263)
T ss_dssp             TE---EEEEECCSSCCCCCCEEEEC
T ss_pred             Cc---cceEECCCCCCCcceEEEeC
Confidence            44   22322 23333444555544

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=95.96  E-value=0.093  Score=42.78  Aligned_cols=99  Identities=7%  Similarity=0.066  Sum_probs=59.1

Q ss_pred             EEEEE---CCCeEEEEecccCce-e---EEEECC--eeeEEEEECCCCCEEEEee--C-------------CCcEEEEcC
Q psy2107         289 IITSS---WDHTLKIWDAELGGM-K---SEIVGN--KSFFDVHYSPLSKLVITAS--A-------------DKQIRLYDP  344 (391)
Q Consensus       289 l~s~~---~dg~i~iwd~~~~~~-~---~~~~~~--~~i~~~~~~p~~~~l~~g~--~-------------dg~i~iwd~  344 (391)
                      |++..   ...+|.+|++..... +   .++...  ...+++++..++.+++|-.  .             -+...+|..
T Consensus       114 L~vvnH~~~~~~ieif~~~~~~~~l~~~~~v~~~~~~~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~  193 (340)
T d1v04a_         114 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY  193 (340)
T ss_dssp             EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEE
T ss_pred             EEEEeccCCCceeEEEEEeCCCCeEEEEeecCCccccCccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEE
Confidence            55553   346788888764432 1   222222  2567888888888888731  1             122333333


Q ss_pred             CCCCcceEEEEeccccCcEEEEEECCCCCCEEEEeeCCCcEEEEecC
Q psy2107         345 KVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDLR  391 (391)
Q Consensus       345 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdlr  391 (391)
                      ..+...    .....-...+.++++|++..++++-+..+.|++|++.
T Consensus       194 ~~~~~~----~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i~~y~~~  236 (340)
T d1v04a_         194 SPNDVR----VVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH  236 (340)
T ss_dssp             CSSCEE----EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred             cCCceE----EEcCCCCccceeEECCCCCEEEEEeCCCCeEEEEEeC
Confidence            333321    2222335689999999777777888888999998863

>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Nidogen
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.88  E-value=0.27  Score=38.23  Aligned_cols=156  Identities=5%  Similarity=-0.070  Sum_probs=93.2

Q ss_pred             CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEE
Q psy2107         203 HERGLETVTVSESRQQFATGG-WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAV  281 (391)
Q Consensus       203 ~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  281 (391)
                      +...+..|+|.+..+.|.... .++.|+..+++...                             ....+...-..+..+
T Consensus        34 ~~~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~-----------------------------~~~v~~~~~~~p~~i   84 (263)
T d1npea_          34 PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-----------------------------PTTIIRQDLGSPEGI   84 (263)
T ss_dssp             EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC-----------------------------CEEEECTTCCCEEEE
T ss_pred             CCCcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCC-----------------------------cEEEEEeccccccEE
Confidence            345688899998777666554 55778888876422                             122222223456788


Q ss_pred             Eec-cCCeEEEE-ECCCeEEEEecccCceeEEEECC-eeeEEEEECCCCCEEEEeeCC-Cc--EEEEcCCCCCcceEEEE
Q psy2107         282 QWT-AVDEIITS-SWDHTLKIWDAELGGMKSEIVGN-KSFFDVHYSPLSKLVITASAD-KQ--IRLYDPKVKEGAIVKST  355 (391)
Q Consensus       282 ~~~-~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~-~~i~~~~~~p~~~~l~~g~~d-g~--i~iwd~~~~~~~~~~~~  355 (391)
                      ++. ..+.|+.+ ...+.|.+.++........+... ..+..+++.|...++.-.... +.  |.--++....   ....
T Consensus        85 AvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~---~~~i  161 (263)
T d1npea_          85 ALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRIL  161 (263)
T ss_dssp             EEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEE
T ss_pred             EEeccCCeEEEeccCCCEEEEEecCCceEEEEecccccCCcEEEEecccCcEEEeecCCCCcEEEEecCCCCC---ceee
Confidence            887 45566544 55779999998755443333322 467889999987766644322 23  4444544322   1112


Q ss_pred             eccccCcEEEEEECCCCCCEEEEeeCCCcEEEEec
Q psy2107         356 FSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       356 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwdl  390 (391)
                      ....-...+++++.+.+++++.+-...+.|...|+
T Consensus       162 ~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~  196 (263)
T d1npea_         162 AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP  196 (263)
T ss_dssp             ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred             eeecccccceEEEeecCcEEEEEeCCCCEEEEEEC
Confidence            22233567899998866666666566677776654

>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Galactose oxidase, central domain
family: Galactose oxidase, central domain
domain: Galactose oxidase, central domain
species: Fungi (Fusarium sp.) [TaxId: 29916]

Probab=95.29  E-value=0.44  Score=39.10  Aligned_cols=151  Identities=8%  Similarity=-0.010  Sum_probs=81.1

Q ss_pred             CCCeEEEEEeCCC-----------cEEEEeecCCCCceeEEEEEe-cCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEECC
Q psy2107         168 GKDAAFISVSTDQ-----------TAMIWEWKVESNSIECIHVCR-GHERGLETVTVSESRQQFATGGWD-CLLKIWSAD  234 (391)
Q Consensus       168 ~~~~~l~s~~~dg-----------~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~~  234 (391)
                      .+++.++.|+.+.           .+.+||..  ++.+....... .|.......++.+++++++.|+.+ ..+.+||..
T Consensus        29 ~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~--t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~  106 (387)
T d1k3ia3          29 TSGRVLMWSSYRNDAFGGSPGGITLTSSWDPS--TGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSS  106 (387)
T ss_dssp             TTTEEEEEEECCCTTTCSCCCSEEEEEEECTT--TCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGG
T ss_pred             eCCEEEEEEeecCcccCCCCCceeEEEEEECC--CCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCc
Confidence            3677777776421           26688854  33443332222 233334566788999999988765 589999987


Q ss_pred             CCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccC-CeEEEEECC------CeEEEEecccCc
Q psy2107         235 ISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAV-DEIITSSWD------HTLKIWDAELGG  307 (391)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~l~s~~~d------g~i~iwd~~~~~  307 (391)
                      +..-.                           ....+...... ...+..++ ..++.++.+      ..+.+||..+.+
T Consensus       107 ~~~w~---------------------------~~~~~~~~r~~-~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~  158 (387)
T d1k3ia3         107 SDSWI---------------------------PGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT  158 (387)
T ss_dssp             GTEEE---------------------------ECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred             cCccc---------------------------ccccccccccc-cceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence            63321                           11111111111 23344434 445555432      368899988765


Q ss_pred             eeEEEECC---------------eeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCC
Q psy2107         308 MKSEIVGN---------------KSFFDVHYSPLSKLVITASADKQIRLYDPKVKE  348 (391)
Q Consensus       308 ~~~~~~~~---------------~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~  348 (391)
                      -...-...               .....+...++|+.++.+...+.+.+++..+..
T Consensus       159 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~  214 (387)
T d1k3ia3         159 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGD  214 (387)
T ss_dssp             EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCE
T ss_pred             eeecCCCcccccccccccceeeccceeEEEEeCCCCEEEecCcCCcEEecCcccCc
Confidence            32211000               001112334567777777777778888876543

>d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Thermostable phytase (3-phytase)
family: Thermostable phytase (3-phytase)
domain: Thermostable phytase (3-phytase)
species: Bacillus amyloliquefaciens [TaxId: 1390]

Probab=95.14  E-value=0.63  Score=37.67  Aligned_cols=202  Identities=9%  Similarity=0.098  Sum_probs=114.6

Q ss_pred             EEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeEEEEEecCCCCeEEEEEc------CCCCEEEEEeC--C--CcEEE
Q psy2107         161 VAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIECIHVCRGHERGLETVTVS------ESRQQFATGGW--D--CLLKI  230 (391)
Q Consensus       161 l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~------~~~~~l~sg~~--d--g~i~i  230 (391)
                      +-++|.+|...+++.....+-|.+||+.     ++.+..+.  .+.+..+..-      ....-++.++.  +  ..|.+
T Consensus        31 IW~n~~~p~~SlI~gTdK~~Gl~vYdL~-----G~~l~~~~--~Gr~NNVDvr~~~~l~~~~~di~vasnR~~~~~~l~~  103 (353)
T d1h6la_          31 IWLDPKNPQNSKLITTNKKSGLAVYSLE-----GKMLHSYH--TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEI  103 (353)
T ss_dssp             EECCSSCGGGCEEEEEETTSCCEEEETT-----CCEEEECC--SSCEEEEEEEEEEEETTEEEEEEEEEECCTTTCEEEE
T ss_pred             EEcCCCCcCccEEEEEcCcCCEEEEcCC-----CcEEEecc--cCCcCccccccccccCCcceEEEEEeCCcCcceeEEE
Confidence            3334445566778877888889999953     23333332  3455555543      22223555552  2  35778


Q ss_pred             EECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEe--cc-CC--eEEEEECCCeEEEEecc-
Q psy2107         231 WSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQW--TA-VD--EIITSSWDHTLKIWDAE-  304 (391)
Q Consensus       231 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~--~l~s~~~dg~i~iwd~~-  304 (391)
                      |.+........                  .......+.   ..-...+..+|+  ++ .+  .+++...+|.+..|.+. 
T Consensus       104 ~~id~~~~~l~------------------~~~~~~~p~---~~~~~~vYGlc~y~~~~~g~~~afv~~k~G~v~q~~l~~  162 (353)
T d1h6la_         104 YAIDGKNGTLQ------------------SITDPNRPI---ASAIDEVYGFSLYHSQKTGKYYAMVTGKEGEFEQYELNA  162 (353)
T ss_dssp             EEEETTTTEEE------------------ECSCSSSCE---ECSSSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEE
T ss_pred             EEecCcccccc------------------ccccccccc---ccccCcceEEEEEecCCCCeEEEEEEcCCceEEEEEEEc
Confidence            87753111000                  000000010   011123556666  43 33  35667788999888763 


Q ss_pred             --cC----ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCC--CcceEEEEecc--ccCcEEEEEECC--C-
Q psy2107         305 --LG----GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVK--EGAIVKSTFSS--HKEWVQSVRWSP--I-  371 (391)
Q Consensus       305 --~~----~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~--~~~~~~~~~~~--h~~~v~~~~~~~--~-  371 (391)
                        .+    +.++.+.....+..|++.+....|..+-.+..|+.++....  ....++....+  ...-+-.|+.-.  + 
T Consensus       163 ~~~g~v~~~lvr~f~~~~q~EGCVvDde~~~LyisEE~~Giw~~~a~~~~~~~~~~i~~~~g~~l~~D~EGlaiy~~~~~  242 (353)
T d1h6la_         163 DKNGYISGKKVRAFKMNSQTEGMAADDEYGSLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTPDIEGLTIYYAADG  242 (353)
T ss_dssp             CTTSSEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEEEEESSTTSCSCCEEEEECSSSSCCSCEEEEEEEECGGG
T ss_pred             CCCCceeeEeeeccCCCCccceEEEeCCCCcEEEecCccceEEEEeccCCCccceeeecccCccccCCccccEEEEcCCC
Confidence              22    35566777778999999999999999987777766665422  22223333222  345677777543  2 


Q ss_pred             CCCEEEEeeCCCcEEEEec
Q psy2107         372 DPQLFVSASFDNSVKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~v~iwdl  390 (391)
                      .+.+|+|.-.+++..|||.
T Consensus       243 ~GylivSsQG~n~f~vydr  261 (353)
T d1h6la_         243 KGYLLASSQGNSSYAIYER  261 (353)
T ss_dssp             CEEEEEEEGGGTEEEEEES
T ss_pred             CeEEEEEcCCCCeEEEEec
Confidence            3467777777889999985

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.05  E-value=0.99  Score=39.44  Aligned_cols=82  Identities=16%  Similarity=0.040  Sum_probs=51.6

Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc-ccCcEEEEEECCCCC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS-HKEWVQSVRWSPIDP  373 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~  373 (391)
                      .|.|.-+|+.+++.+.......+..+-.++-.+.++++|+.||.++.+|.++++   .+..+.- ....-.-+.|..++.
T Consensus       443 ~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe---~lW~~~l~~~~~a~P~ty~~dGk  519 (571)
T d2ad6a1         443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK---ELWNFKMPSGGIGSPMTYSFKGK  519 (571)
T ss_dssp             CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTE
T ss_pred             cccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCc---EEEEEECCCCceecceEEEECCE
Confidence            478999999999998877655433221222246788889999999999999877   4444321 111111244444566


Q ss_pred             CEEEEe
Q psy2107         374 QLFVSA  379 (391)
Q Consensus       374 ~~l~s~  379 (391)
                      ++++..
T Consensus       520 qYi~v~  525 (571)
T d2ad6a1         520 QYIGSM  525 (571)
T ss_dssp             EEEEEE
T ss_pred             EEEEEE
Confidence            666543

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=94.65  E-value=1.1  Score=39.11  Aligned_cols=50  Identities=8%  Similarity=0.142  Sum_probs=37.4

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEE--EEECCCCC-EEEEee
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD--VHYSPLSK-LVITAS  334 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~--~~~~p~~~-~l~~g~  334 (391)
                      .++.+++|+.||.++.+|.++|+.+.++.....+..  +.+..+|+ ||++.+
T Consensus       468 agglVF~G~~dg~l~A~Da~tGe~LW~~~l~~~~~~~P~ty~~dGkqyv~v~a  520 (560)
T d1kv9a2         468 AGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMA  520 (560)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred             CCCEEEEECCCCcEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEEe
Confidence            467888999999999999999999999987654332  44555675 555443

>d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nitrous oxide reductase, N-terminal domain
family: Nitrous oxide reductase, N-terminal domain
domain: Nitrous oxide reductase, N-terminal domain
species: Paracoccus denitrificans [TaxId: 266]

Probab=94.49  E-value=1.1  Score=37.17  Aligned_cols=81  Identities=12%  Similarity=0.112  Sum_probs=53.6

Q ss_pred             eeEEEECCeeeEEEEECCCCCEEEEe-eCCCcEEEEcCCCCC---------cceEEEEeccccCcEEEEEECCCCCCEEE
Q psy2107         308 MKSEIVGNKSFFDVHYSPLSKLVITA-SADKQIRLYDPKVKE---------GAIVKSTFSSHKEWVQSVRWSPIDPQLFV  377 (391)
Q Consensus       308 ~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i~iwd~~~~~---------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~  377 (391)
                      .+..+........+.++|||++++++ ..+.++.|+|++.-.         ...+... ....-...+-+|+. .++...
T Consensus       267 v~~yIPVpKsPHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e-~elglgPLht~fd~-~g~ayt  344 (459)
T d1fwxa2         267 FTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-PELGLGPLHTAFDG-RGNAYT  344 (459)
T ss_dssp             SEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEEC-CBCCSCEEEEEECT-TSEEEE
T ss_pred             eeEEEecCCCCCceEECCCCCEEEEeCCcCCcEEEEEehhhhhhhcccCCccccEEee-cccCcCccccccCC-CceEEE
Confidence            33445555556778999999987765 468899999985311         1112222 22334567788987 566666


Q ss_pred             EeeCCCcEEEEec
Q psy2107         378 SASFDNSVKLWDL  390 (391)
Q Consensus       378 s~~~dg~v~iwdl  390 (391)
                      |.--|..|--|++
T Consensus       345 slfids~v~kw~~  357 (459)
T d1fwxa2         345 SLFLDSQVVKWNI  357 (459)
T ss_dssp             EETTTTEEEEEEH
T ss_pred             EeeccceEEEEec
Confidence            7778999999986

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.41  E-value=1  Score=36.77  Aligned_cols=137  Identities=10%  Similarity=0.030  Sum_probs=79.6

Q ss_pred             CeeEEEEEecCCCCeEEEEEeCCCcEEEEeec---------CCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy2107         157 PVKGVAWLYNDGKDAAFISVSTDQTAMIWEWK---------VESNSIECIHVCRGHERGLETVTVSESRQQFATGGWDCL  227 (391)
Q Consensus       157 ~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~---------~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~  227 (391)
                      ...-++.   ++...++++|+.++ +.|....         ...........    -..|..++|+.+  .++.. .++.
T Consensus        38 ~~~LLAV---sn~~GLl~aa~~~~-l~V~~t~~l~~~~~~~~~~~~~~~~~~----ip~v~~vafs~d--~l~v~-~~~~  106 (381)
T d1xipa_          38 SLQNLDI---SNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKE----IPDVIFVCFHGD--QVLVS-TRNA  106 (381)
T ss_dssp             CCBCEEE---ETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEE----CTTEEEEEEETT--EEEEE-ESSE
T ss_pred             ccceEEE---eCCCCEEEEECCCE-EEEEEHHHHHHHhhccCCCCcceeccC----CCCeEEEEeeCC--EEEEE-eCCC
Confidence            3455666   34455677777775 5565521         11122222222    236888999755  45444 4456


Q ss_pred             EEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCccCcccEEEeccCCeEEEEECCCeEEEEecccCc
Q psy2107         228 LKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHKEAISAVQWTAVDEIITSSWDHTLKIWDAELGG  307 (391)
Q Consensus       228 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~~  307 (391)
                      +..++...-.                             .......-..++..+.++| ..++....++.+.++++..++
T Consensus       107 l~~~~~~~l~-----------------------------~~~~~~~~~~~~~~~~~~p-~~~~l~~~~~~~~~~~l~~~~  156 (381)
T d1xipa_         107 LYSLDLEELS-----------------------------EFRTVTSFEKPVFQLKNVN-NTLVILNSVNDLSALDLRTKS  156 (381)
T ss_dssp             EEEEESSSTT-----------------------------CEEEEEECSSCEEEEEECS-SEEEEEETTSEEEEEETTTCC
T ss_pred             EEEEEeeccc-----------------------------cccccccccccccceecCC-ceeEEEecCCCEEEEEeccCc
Confidence            7778775411                             1222222345567777776 456667778999999998876


Q ss_pred             eeEEEE------CCeeeEEEEECCCCCEEEEee
Q psy2107         308 MKSEIV------GNKSFFDVHYSPLSKLVITAS  334 (391)
Q Consensus       308 ~~~~~~------~~~~i~~~~~~p~~~~l~~g~  334 (391)
                      ......      -.....+++|++.|..++++.
T Consensus       157 ~~~~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~  189 (381)
T d1xipa_         157 TKQLAQNVTSFDVTNSQLAVLLKDRSFQSFAWR  189 (381)
T ss_dssp             EEEEEESEEEEEECSSEEEEEETTSCEEEEEEE
T ss_pred             cccccCCcceEEecCCceEEEEeCCcEEEEEeC
Confidence            433221      234567777887777777764

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=94.33  E-value=0.54  Score=41.25  Aligned_cols=58  Identities=14%  Similarity=0.131  Sum_probs=43.0

Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEe
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTF  356 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~  356 (391)
                      |.+.-||+.+++.+.......+...-..+-.+.++++|+.||.++.||.++++   .+..+
T Consensus       457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe---~LW~~  514 (573)
T d1kb0a2         457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE---KLWEA  514 (573)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEE
T ss_pred             ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCc---EeEEE
Confidence            57888999999988887765543322233357888899999999999999987   44444

>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.31  E-value=1.5  Score=38.21  Aligned_cols=31  Identities=6%  Similarity=0.130  Sum_probs=22.7

Q ss_pred             EEEecCCEEEEEECCCeEEEEcC-CCceEEec
Q psy2107         121 AIDFHNDWILTGCYDHSVHIWTR-RGEHKLNI  151 (391)
Q Consensus       121 ~~~~~~~~l~t~~~dg~i~iwd~-~~~~~~~~  151 (391)
                      .+++.+..++.++.||.+.-.|. +++.+...
T Consensus       110 g~a~~~~~i~~~~~~g~l~alda~tG~~~w~~  141 (571)
T d2ad6a1         110 GLAYGAGQIVKKQANGHLLALDAKTGKINWEV  141 (571)
T ss_dssp             CCEEETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred             cceeeCCeEEEEeCCCcEEeeehhhhhhhccc
Confidence            34666778888999999888888 55555443

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.10  E-value=1.7  Score=38.00  Aligned_cols=48  Identities=15%  Similarity=0.145  Sum_probs=37.3

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEE--EEECCCCC-EEEE
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD--VHYSPLSK-LVIT  332 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~--~~~~p~~~-~l~~  332 (391)
                      .++.+++|+.||.++.+|.++|+.+..+.....+..  +.|..+|+ |++.
T Consensus       496 agglVF~Gt~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~G~qYv~i  546 (582)
T d1flga_         496 AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGV  546 (582)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             cCCeEEEeCCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEE
Confidence            567888999999999999999999999987653322  56666775 5544

>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Comamonas testosteroni [TaxId: 285]

Probab=93.47  E-value=0.67  Score=40.58  Aligned_cols=49  Identities=18%  Similarity=0.125  Sum_probs=37.2

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEE--EEECCCCC-EEEEe
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD--VHYSPLSK-LVITA  333 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~--~~~~p~~~-~l~~g  333 (391)
                      .++.+++|+.||.++.+|.++|+.+.++.....+..  +.|..+|+ ||+..
T Consensus       487 agglVF~G~~dg~l~A~Da~TGe~LW~~~~~~~~~~~P~ty~~~GkQYv~v~  538 (573)
T d1kb0a2         487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVSVA  538 (573)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeEEEECCCCccccCEEEEECCEEEEEEE
Confidence            567888999999999999999999999987654332  44555676 44443

>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: YWTD domain
family: YWTD domain
domain: Low density lipoprotein (LDL) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.63  E-value=2.2  Score=32.78  Aligned_cols=197  Identities=11%  Similarity=-0.024  Sum_probs=107.0

Q ss_pred             CCcEEEEEec--CCEEE-EEECCCeEEEEcCCCc-----eEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEee
Q psy2107         116 DDWVSAIDFH--NDWIL-TGCYDHSVHIWTRRGE-----HKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEW  187 (391)
Q Consensus       116 ~~~V~~~~~~--~~~l~-t~~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~  187 (391)
                      ...+.+++|+  .+.++ +-..++.|.--++++.     ....+......+..+++-+.  .+++..+-...+.|.+.++
T Consensus        29 ~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~~~~~~p~glAvD~~--~~~lY~~d~~~~~I~v~~~  106 (266)
T d1ijqa1          29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADT  106 (266)
T ss_dssp             CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEET
T ss_pred             CCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCCCCcceEEEEeCCCCCcceEEEeec--cceEEEEecCCCEEEeEec
Confidence            3456788887  45444 4445667776666431     11222233345667777322  4455566667788999885


Q ss_pred             cCCCCceeEEEEEecCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCC
Q psy2107         188 KVESNSIECIHVCRGHERGLETVTVSESRQQFATGG--WDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSR  265 (391)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (391)
                      +  ...  ..............++++|...+|....  ..+.|.-.+++...                            
T Consensus       107 ~--g~~--~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~----------------------------  154 (266)
T d1ijqa1         107 K--GVK--RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----------------------------  154 (266)
T ss_dssp             T--SSS--EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----------------------------
T ss_pred             C--Cce--EEEEEcCCCCCcceEEEEcccCeEEEeccCCCcceeEeccCCCc----------------------------
Confidence            4  222  2223344456788999998665555443  33456555554311                            


Q ss_pred             CceeeecCccCcccEEEecc-CCeEEEE-ECCCeEEEEecccCceeEEEECC---eeeEEEEECCCCCEEEEeeCCCcEE
Q psy2107         266 TPLITLKGHKEAISAVQWTA-VDEIITS-SWDHTLKIWDAELGGMKSEIVGN---KSFFDVHYSPLSKLVITASADKQIR  340 (391)
Q Consensus       266 ~~~~~~~~~~~~v~~~~~~~-~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~---~~i~~~~~~p~~~~l~~g~~dg~i~  340 (391)
                       ........-.....+++.+ .+.|+.+ ...+.|...|+............   .....+++. .+.+..+-..++.|.
T Consensus       155 -~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~-~~~ly~td~~~~~I~  232 (266)
T d1ijqa1         155 -IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF  232 (266)
T ss_dssp             -EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred             -eecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEE-CCEEEEEECCCCeEE
Confidence             1111222224456788874 4556555 55678888888654433333322   134566665 233444444667787


Q ss_pred             EEcCCCCC
Q psy2107         341 LYDPKVKE  348 (391)
Q Consensus       341 iwd~~~~~  348 (391)
                      ..+..++.
T Consensus       233 ~~~~~~g~  240 (266)
T d1ijqa1         233 SANRLTGS  240 (266)
T ss_dssp             EEETTTCC
T ss_pred             EEECCCCc
Confidence            77766554

>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Calcium-dependent phosphotriesterase
family: Serum paraoxonase/arylesterase 1, PON1
domain: Serum paraoxonase/arylesterase 1, PON1
species: Rabit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=91.59  E-value=2.7  Score=33.69  Aligned_cols=102  Identities=14%  Similarity=0.131  Sum_probs=55.7

Q ss_pred             cccEEEeccCCeEEEEEC----C------------CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEe-eCCCcE
Q psy2107         277 AISAVQWTAVDEIITSSW----D------------HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITA-SADKQI  339 (391)
Q Consensus       277 ~v~~~~~~~~~~l~s~~~----d------------g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g-~~dg~i  339 (391)
                      ....+...+++.++....    +            +.-.+|....+........-...+.++++|++++|+.+ +..+.|
T Consensus       151 ~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~~~~~~~~~l~~pNGI~~s~d~~~lyVa~t~~~~i  230 (340)
T d1v04a_         151 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKI  230 (340)
T ss_dssp             SEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSSCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEE
T ss_pred             CccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCCceEEEcCCCCccceeEECCCCCEEEEEeCCCCeE
Confidence            356777765555554421    0            22333433333333223333456889999999876554 567889


Q ss_pred             EEEcCCCCCcceEEEEeccccCcEEEEEECCCCCCEEEEe
Q psy2107         340 RLYDPKVKEGAIVKSTFSSHKEWVQSVRWSPIDPQLFVSA  379 (391)
Q Consensus       340 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~  379 (391)
                      ++|++............ .-...+-.+.+.+.++.+.+.+
T Consensus       231 ~~y~~~~~~~l~~~~~~-~l~~~pDNi~~d~~~g~lwva~  269 (340)
T d1v04a_         231 HVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGC  269 (340)
T ss_dssp             EEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred             EEEEeCCCcccceEEEe-cCCCCCCccEEecCCCEEEEEE
Confidence            99998654322222222 2344567778876455544443

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=91.57  E-value=2  Score=37.60  Aligned_cols=77  Identities=14%  Similarity=0.137  Sum_probs=51.6

Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc----ccCcEEEEEECCC
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS----HKEWVQSVRWSPI  371 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~~  371 (391)
                      |.|.-||+.+++.+.......+...-.++-.+.+++.|+.||.++.+|.++++   .+..+.-    +..+++   +..+
T Consensus       453 G~l~A~D~~TG~~~W~~~~~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe---~LW~~~~~~~~~a~P~t---Y~~d  526 (596)
T d1w6sa_         453 GQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD---LLWKFKIPSGAIGYPMT---YTHK  526 (596)
T ss_dssp             EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEE---EEET
T ss_pred             ceEEEEeCCCCceecccCCCCCCccceeEecCCEEEEECCCCeEEEEECCCCc---EeeEEECCCCcccCCeE---EEEC
Confidence            67899999999988776655443332333357788889999999999999987   5544432    233443   4444


Q ss_pred             CCCEEEE
Q psy2107         372 DPQLFVS  378 (391)
Q Consensus       372 ~~~~l~s  378 (391)
                      +.++++.
T Consensus       527 GkQYvav  533 (596)
T d1w6sa_         527 GTQYVAI  533 (596)
T ss_dssp             TEEEEEE
T ss_pred             CEEEEEE
Confidence            6666654

>d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Nucleoporin domain
family: Nucleoporin domain
domain: Nucleoporin NUP159
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.04  E-value=3.3  Score=33.68  Aligned_cols=99  Identities=10%  Similarity=0.032  Sum_probs=62.2

Q ss_pred             cEEEEEecCCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCceeE
Q psy2107         118 WVSAIDFHNDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIEC  196 (391)
Q Consensus       118 ~V~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~  196 (391)
                      .|..++|+++.++... ++.+..++.. -........-..++..+.+.   +.  .++....+|.+.++++.  ......
T Consensus        88 ~v~~vafs~d~l~v~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~---p~--~~~l~~~~~~~~~~~l~--~~~~~~  159 (381)
T d1xipa_          88 DVIFVCFHGDQVLVST-RNALYSLDLEELSEFRTVTSFEKPVFQLKNV---NN--TLVILNSVNDLSALDLR--TKSTKQ  159 (381)
T ss_dssp             TEEEEEEETTEEEEEE-SSEEEEEESSSTTCEEEEEECSSCEEEEEEC---SS--EEEEEETTSEEEEEETT--TCCEEE
T ss_pred             CeEEEEeeCCEEEEEe-CCCEEEEEeeccccccccccccccccceecC---Cc--eeEEEecCCCEEEEEec--cCcccc
Confidence            5888999988877664 4567777763 23333333345667888873   32  46677778999998854  222222


Q ss_pred             EEE---EecCCCCeEEEEEcCCCCEEEEEeC
Q psy2107         197 IHV---CRGHERGLETVTVSESRQQFATGGW  224 (391)
Q Consensus       197 ~~~---~~~~~~~v~~l~~~~~~~~l~sg~~  224 (391)
                      +..   -..-.+.+.+++|++.+..++++..
T Consensus       160 ~~~~v~~~~~~~~~~~v~ws~kgkq~v~~~g  190 (381)
T d1xipa_         160 LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRN  190 (381)
T ss_dssp             EEESEEEEEECSSEEEEEETTSCEEEEEEET
T ss_pred             ccCCcceEEecCCceEEEEeCCcEEEEEeCC
Confidence            210   0112466888889888888887743

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.82  E-value=3  Score=34.59  Aligned_cols=110  Identities=13%  Similarity=0.175  Sum_probs=62.0

Q ss_pred             cEEEeccCCe-E-EEEECCC----eEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCC----------------
Q psy2107         279 SAVQWTAVDE-I-ITSSWDH----TLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASAD----------------  336 (391)
Q Consensus       279 ~~~~~~~~~~-l-~s~~~dg----~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~d----------------  336 (391)
                      ...+++|++. + ++-+.+|    .++++|+.+++.+...-.......++|.++++.|+-...+                
T Consensus       128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W~~D~~~~~Y~~~~~~~~~~~~~~~~~~~~  207 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLH  207 (430)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCC
T ss_pred             cceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEEcCCCCEEEEEEeccccCcccccccccCCc
Confidence            3455676665 3 3333344    6999999999876533222233568899999977654322                


Q ss_pred             CcEEEEcCCCCCcc-eEEEEeccccCcEEEEEECCCCCCEEEEee--CCCcEEEE
Q psy2107         337 KQIRLYDPKVKEGA-IVKSTFSSHKEWVQSVRWSPIDPQLFVSAS--FDNSVKLW  388 (391)
Q Consensus       337 g~i~iwd~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~--~dg~v~iw  388 (391)
                      ..|..+.+.+.... .++.........+..+..++++..++++..  .++...+|
T Consensus       208 ~~v~~h~lgt~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~~~  262 (430)
T d1qfma1         208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLW  262 (430)
T ss_dssp             CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEE
T ss_pred             ceEEEEECCCCccccccccccccCCceEEeeeccCCcceeeEEeeccCCccEEEE
Confidence            25777777664332 222222223345777788885554444433  23344444

>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Ethanol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.39  E-value=0.29  Score=43.15  Aligned_cols=79  Identities=16%  Similarity=0.183  Sum_probs=54.2

Q ss_pred             CCeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEecc----ccCcEEEEEECC
Q psy2107         295 DHTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSS----HKEWVQSVRWSP  370 (391)
Q Consensus       295 dg~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~~~~~~  370 (391)
                      .|.|.-+|+.+|+.+.....+.++..-.++..+.++++|+.||.++.+|.++++   .+..+.-    +..+   +.+..
T Consensus       465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe---~LW~~~~~~~~~~~P---~ty~~  538 (582)
T d1flga_         465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK---ELWKFQTGSGIVSPP---ITWEQ  538 (582)
T ss_dssp             SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCC---EEEEE
T ss_pred             CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCc---EeEEEECCCCccccC---EEEEE
Confidence            367888999999999888766655433334457788889999999999999987   5544432    2223   44555


Q ss_pred             CCCCEEEEe
Q psy2107         371 IDPQLFVSA  379 (391)
Q Consensus       371 ~~~~~l~s~  379 (391)
                      ++.++++..
T Consensus       539 ~G~qYv~i~  547 (582)
T d1flga_         539 DGEQYLGVT  547 (582)
T ss_dssp             TTEEEEEEE
T ss_pred             CCEEEEEEE
Confidence            565665543

>d1qfma1 b.69.7.1 (A:1-430) Prolyl oligopeptidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Peptidase/esterase 'gauge' domain
family: Prolyl oligopeptidase, N-terminal domain
domain: Prolyl oligopeptidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.66  E-value=6.5  Score=32.45  Aligned_cols=98  Identities=9%  Similarity=0.056  Sum_probs=52.0

Q ss_pred             EEEEec--CCEEE-EEECCC----eEEEEcCCCceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCC-------------
Q psy2107         120 SAIDFH--NDWIL-TGCYDH----SVHIWTRRGEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTD-------------  179 (391)
Q Consensus       120 ~~~~~~--~~~l~-t~~~dg----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~d-------------  179 (391)
                      ..++++  ++++| +-+.+|    .|++.|+.+.......-.......++|   .+++..|+-...+             
T Consensus       128 ~~~~~Spd~~~la~s~d~~G~e~~~l~v~Dl~tg~~~~~~i~~~~~~~~~W---~~D~~~~~Y~~~~~~~~~~~~~~~~~  204 (430)
T d1qfma1         128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAW---THDGKGMFYNAYPQQDGKSDGTETST  204 (430)
T ss_dssp             EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEE---CTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred             cceEecCCCCEEEEEeccccCchheeEEeccCcceecccccccccccceEE---cCCCCEEEEEEeccccCccccccccc
Confidence            334444  55555 334444    799999955544321111122246888   6677766544322             


Q ss_pred             ---CcEEEEeecCCCCceeEEEEEecC--CCCeEEEEEcCCCCEEEEE
Q psy2107         180 ---QTAMIWEWKVESNSIECIHVCRGH--ERGLETVTVSESRQQFATG  222 (391)
Q Consensus       180 ---g~v~iwd~~~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~~l~sg  222 (391)
                         ..|..+.+.  +........+...  ...+..+..++++++++..
T Consensus       205 ~~~~~v~~h~lg--t~~~~d~~v~~e~d~~~~~~~~~~s~d~~~l~i~  250 (430)
T d1qfma1         205 NLHQKLYYHVLG--TDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLS  250 (430)
T ss_dssp             CCCCEEEEEETT--SCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEE
T ss_pred             CCcceEEEEECC--CCccccccccccccCCceEEeeeccCCcceeeEE
Confidence               246666643  3333333333332  3346677889999987643

>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Methanol dehydrogenase, heavy chain
species: Methylobacterium extorquens [TaxId: 408]

Probab=85.57  E-value=0.98  Score=39.70  Aligned_cols=48  Identities=19%  Similarity=0.184  Sum_probs=36.2

Q ss_pred             cCCeEEEEECCCeEEEEecccCceeEEEECCeeeEE--EEECCCCC-EEEE
Q psy2107         285 AVDEIITSSWDHTLKIWDAELGGMKSEIVGNKSFFD--VHYSPLSK-LVIT  332 (391)
Q Consensus       285 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~i~~--~~~~p~~~-~l~~  332 (391)
                      .++.++.|+.||.++.+|.++|+.+.++.....+..  +.|.-+|+ ||+.
T Consensus       483 agglVF~G~~Dg~l~A~Da~TGe~LW~~~~~~~~~a~P~tY~~dGkQYvav  533 (596)
T d1w6sa_         483 AGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI  533 (596)
T ss_dssp             TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred             cCCEEEEECCCCeEEEEECCCCcEeeEEECCCCcccCCeEEEECCEEEEEE
Confidence            467888899999999999999999999987653322  44555776 5554

>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: 6-bladed beta-propeller
superfamily: Kelch motif
family: Kelch motif
domain: Kelch-like ECH-associated protein 1, KEAP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.55  E-value=6.9  Score=29.78  Aligned_cols=19  Identities=21%  Similarity=0.536  Sum_probs=13.0

Q ss_pred             CCCEEEEeeCCCc-----EEEEec
Q psy2107         372 DPQLFVSASFDNS-----VKLWDL  390 (391)
Q Consensus       372 ~~~~l~s~~~dg~-----v~iwdl  390 (391)
                      ++++++.||.++.     |.+||+
T Consensus       242 ~~~l~v~GG~~~~~~~~~v~~yd~  265 (288)
T d1zgka1         242 QGRIYVLGGYDGHTFLDSVECYDP  265 (288)
T ss_dssp             TTEEEEECCBCSSCBCCEEEEEET
T ss_pred             CCEEEEEecCCCCeecceEEEEEC
Confidence            5577888876653     667775

>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}

class: All beta proteins
fold: 8-bladed beta-propeller
superfamily: Quinoprotein alcohol dehydrogenase-like
family: Quinoprotein alcohol dehydrogenase-like
domain: Quinoprotein alcohol dehydrogenase, N-terminal domain
species: Pseudomonas putida, hk5 [TaxId: 303]

Probab=84.06  E-value=1.1  Score=38.99  Aligned_cols=82  Identities=15%  Similarity=0.147  Sum_probs=51.9

Q ss_pred             CeEEEEecccCceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEEEeccccC-cEEEEEECCCCCC
Q psy2107         296 HTLKIWDAELGGMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKSTFSSHKE-WVQSVRWSPIDPQ  374 (391)
Q Consensus       296 g~i~iwd~~~~~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~  374 (391)
                      |.|.-||+.+++.+.......+...-.++-.+.++++|+.||.++.+|.++++   .+-.+.-... .-.-+.+..++.+
T Consensus       438 G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe---~LW~~~l~~~~~~~P~ty~~dGkq  514 (560)
T d1kv9a2         438 GALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE---ALWQFEAQSGIVAAPMTFELAGRQ  514 (560)
T ss_dssp             EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC---EEEEEECSSCCCSCCEEEEETTEE
T ss_pred             cceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCc---EeEEEECCCCccccCEEEEECCEE
Confidence            67888999999998887765544332233347788899999999999999877   4444432111 1111334444555


Q ss_pred             EEEEee
Q psy2107         375 LFVSAS  380 (391)
Q Consensus       375 ~l~s~~  380 (391)
                      +|+..+
T Consensus       515 yv~v~a  520 (560)
T d1kv9a2         515 YVAIMA  520 (560)
T ss_dssp             EEEEEE
T ss_pred             EEEEEe
Confidence            655443

>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: Clathrin heavy-chain terminal domain
family: Clathrin heavy-chain terminal domain
domain: Clathrin heavy-chain terminal domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.07  E-value=9.6  Score=29.62  Aligned_cols=194  Identities=11%  Similarity=0.075  Sum_probs=102.1

Q ss_pred             cEEEEEec-CCEEEEEECCCeEEEEcCCC--ceEEeccCCC----CCeeEEEEEecCCCCeEEEEEe-------CCCcEE
Q psy2107         118 WVSAIDFH-NDWILTGCYDHSVHIWTRRG--EHKLNIPGHG----GPVKGVAWLYNDGKDAAFISVS-------TDQTAM  183 (391)
Q Consensus       118 ~V~~~~~~-~~~l~t~~~dg~i~iwd~~~--~~~~~~~~~~----~~v~~l~~~~~~~~~~~l~s~~-------~dg~v~  183 (391)
                      .|.--.|- .+.|+-.+. ..|+=|++++  .....+..|.    ..|..-..   +++.+.++..+       -.|.+.
T Consensus       104 ~VvfWkWis~~~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~---d~~~kW~~l~GI~~~~~~i~G~mQ  179 (327)
T d1utca2         104 DVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRT---DAKQKWLLLTGISAQQNRVVGAMQ  179 (327)
T ss_dssp             CCCEEEESSSSEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEE---CTTSCEEEEEEEEEETTEEEEEEE
T ss_pred             CcEEEEecCCCEEEEEcC-CceEEEcccCCCCchhhhhhcccccCceEEEEEE---CCCCCEEEEEeEecCCCceeEEEE
Confidence            44444554 556655544 5799999843  3344343333    23333333   56666554332       136778


Q ss_pred             EEeecCCCCceeEEEEEecCCCCeEEEEEcCCC---CEEEEEe---CCCcEEEEECCCCCCCCCCCCCCCCCcccccccc
Q psy2107         184 IWEWKVESNSIECIHVCRGHERGLETVTVSESR---QQFATGG---WDCLLKIWSADISKERGDPSENGDEGTTSKKRKK  257 (391)
Q Consensus       184 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~  257 (391)
                      +|..+  .   ..-+.+.||......+.+..+.   ++++.+.   ..+.+++.++..........              
T Consensus       180 LYS~e--r---~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f--------------  240 (327)
T d1utca2         180 LYSVD--R---KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF--------------  240 (327)
T ss_dssp             EEETT--T---TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCC--------------
T ss_pred             EEEec--c---CcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCC--------------
Confidence            88743  2   3345667776655555443222   2333222   23678888886532211000              


Q ss_pred             ccccCCCCCceeeec---CccCcccEEEec-cCCeEEEEECCCeEEEEecccCceeEEEECCe-eeEEEEECCCCCEEEE
Q psy2107         258 EYSSASSRTPLITLK---GHKEAISAVQWT-AVDEIITSSWDHTLKIWDAELGGMKSEIVGNK-SFFDVHYSPLSKLVIT  332 (391)
Q Consensus       258 ~~~~~~~~~~~~~~~---~~~~~v~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~i~~~~~~p~~~~l~~  332 (391)
                            ..+....+.   ...+--.++..+ ..+.++.-+.-|.+.+||+.++.++..-+-.. +|...+-.....-+++
T Consensus       241 ------~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~nRIs~~~iF~~a~~~~~~Gi~~  314 (327)
T d1utca2         241 ------PKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIG  314 (327)
T ss_dssp             ------CCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEE
T ss_pred             ------cceeEEEECCccccCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEEeecCCCceEEeccCCCCceEEE
Confidence                  000111111   111223455556 56789999999999999999999988776533 5554444444333444


Q ss_pred             eeCCCcEE
Q psy2107         333 ASADKQIR  340 (391)
Q Consensus       333 g~~dg~i~  340 (391)
                      -..+|.|.
T Consensus       315 VNr~GqVl  322 (327)
T d1utca2         315 VNRKGQVL  322 (327)
T ss_dssp             EETTSEEE
T ss_pred             ECCCCeEE
Confidence            44556543

>d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]}

class: All beta proteins
fold: 7-bladed beta-propeller
superfamily: RCC1/BLIP-II
family: beta-lactamase inhibitor protein-II, BLIP-II
domain: beta-lactamase inhibitor protein-II, BLIP-II
species: Streptomyces exfoliatus [TaxId: 1905]

Probab=81.68  E-value=9.1  Score=29.10  Aligned_cols=217  Identities=10%  Similarity=0.025  Sum_probs=100.1

Q ss_pred             CcEEEEEecCCEEEEEECCCeEEEEcCC-CceEEeccCCCCCeeEEEEEecCCCCeEEEEEeCCCcEEEEeecCCCCcee
Q psy2107         117 DWVSAIDFHNDWILTGCYDHSVHIWTRR-GEHKLNIPGHGGPVKGVAWLYNDGKDAAFISVSTDQTAMIWEWKVESNSIE  195 (391)
Q Consensus       117 ~~V~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~  195 (391)
                      ..|..|+.-....+.-. ||.|..|-.. ..++..-......|..++.   . ....++.  .||.+..|..........
T Consensus        26 ~~i~~va~G~~h~~al~-dG~v~~wG~N~~GQlG~~~~~~~~v~~v~~---G-~~~~~al--~dg~v~~wG~~~~gq~~~   98 (273)
T d1jtdb_          26 SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAA---G-NYHSLAL--KDGEVIAWGGNEDGQTTV   98 (273)
T ss_dssp             SSEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSCCGGGGSCCCEEEE---C-SSEEEEE--ETTEEEEEECCTTSTTCC
T ss_pred             CCcEEEEccCCEEEEEE-CCEEEEEeCCCCCceeeeecccccceEEec---C-CCceeee--eeeeeeccCCCcceeecc
Confidence            46888887655555445 8999999652 2222111122344556654   2 2223332  489999997432111110


Q ss_pred             EEEEEecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCCCCCCCCCCCCCccccccccccccCCCCCceeeecCcc
Q psy2107         196 CIHVCRGHERGLETVTVSESRQQFATGGWDCLLKIWSADISKERGDPSENGDEGTTSKKRKKEYSSASSRTPLITLKGHK  275 (391)
Q Consensus       196 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (391)
                          .......+..++.....  .+ +-.|+.+..|.........                             ......
T Consensus        99 ----~~~~~~~~~~i~~~~~~--~~-~~~dg~v~~~g~~~~~~~~-----------------------------~~~~~~  142 (273)
T d1jtdb_          99 ----PAEARSGVDAIAAGAWA--SY-ALKDGKVIAWGDDSDGQTT-----------------------------VPAEAQ  142 (273)
T ss_dssp             ----CGGGGSSCCEEEEETTE--EE-EEETTEEEEEECCTTSTTS-----------------------------CCGGGG
T ss_pred             ----ccccccceeEEeeeccc--cc-ccccccceecccCCCCcee-----------------------------eeccCC
Confidence                01112334455443322  22 2257889888754321100                             000011


Q ss_pred             CcccEEEeccCCeEEEEECCCeEEEEecccC-ceeEEEECCeeeEEEEECCCCCEEEEeeCCCcEEEEcCCCCCcceEEE
Q psy2107         276 EAISAVQWTAVDEIITSSWDHTLKIWDAELG-GMKSEIVGNKSFFDVHYSPLSKLVITASADKQIRLYDPKVKEGAIVKS  354 (391)
Q Consensus       276 ~~v~~~~~~~~~~l~s~~~dg~i~iwd~~~~-~~~~~~~~~~~i~~~~~~p~~~~l~~g~~dg~i~iwd~~~~~~~~~~~  354 (391)
                      ..|..++-  ....+....++.+..|-.... +..........|..++..... .++.  .||.|+-|=.....+. .  
T Consensus       143 ~~v~~~~~--~~~~~~~~~~g~~~~~G~~~~g~~~~~~~~~~~v~~Is~G~~h-~~~l--~dG~v~~WG~n~~Gql-~--  214 (273)
T d1jtdb_         143 SGVTALDG--GVYTALAVKNGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQT-T--  214 (273)
T ss_dssp             SSEEEEEE--CSSEEEEEETTEEEEEECCTTSTTSCCGGGSSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTT-C--
T ss_pred             ceEEEEec--cceeeeeecccceeEeecccCCcccccccccCCccceecccee-eEEE--ecCcEEEcCCCCCCcc-C--
Confidence            22222222  122233344677888865432 211112223356666654322 2222  3788988854322111 1  


Q ss_pred             EeccccCcEEEEEECCCCCCEEEEeeCCCcEEEE
Q psy2107         355 TFSSHKEWVQSVRWSPIDPQLFVSASFDNSVKLW  388 (391)
Q Consensus       355 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw  388 (391)
                      ........|..|+-..  ...++. . ||.|..|
T Consensus       215 ~~~~~~~~v~~I~~G~--~~~~~l-~-~g~v~~W  244 (273)
T d1jtdb_         215 VPTEALSGVSAIASGE--WYSLAL-K-NGKVIAW  244 (273)
T ss_dssp             CCGGGGSSCCEEEECS--SCEEEE-E-TTEEEEE
T ss_pred             CCccCCCCcEEEEeCc--ceEEEE-E-CCEEEEE
Confidence            0111224477777643  223333 3 7999998