Psyllid ID: psy2354
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | 2.2.26 [Sep-21-2011] | |||||||
| O15067 | 1338 | Phosphoribosylformylglyci | yes | N/A | 0.238 | 0.133 | 0.550 | 5e-53 | |
| Q5SUR0 | 1337 | Phosphoribosylformylglyci | yes | N/A | 0.237 | 0.133 | 0.555 | 2e-51 | |
| P35421 | 1354 | Phosphoribosylformylglyci | yes | N/A | 0.232 | 0.128 | 0.523 | 4e-46 | |
| Q54JC8 | 1355 | Phosphoribosylformylglyci | yes | N/A | 0.233 | 0.129 | 0.460 | 6e-41 | |
| Q9M8D3 | 1407 | Probable phosphoribosylfo | yes | N/A | 0.245 | 0.130 | 0.439 | 5e-35 | |
| Q19311 | 1324 | Probable phosphoribosylfo | yes | N/A | 0.323 | 0.182 | 0.338 | 6e-33 | |
| P38972 | 1358 | Phosphoribosylformylglyci | yes | N/A | 0.216 | 0.119 | 0.367 | 3e-22 | |
| Q8PGR7 | 1348 | Phosphoribosylformylglyci | yes | N/A | 0.233 | 0.129 | 0.339 | 5e-21 | |
| O14228 | 1323 | Probable phosphoribosylfo | yes | N/A | 0.216 | 0.122 | 0.355 | 6e-20 | |
| Q8XYN6 | 1369 | Phosphoribosylformylglyci | yes | N/A | 0.221 | 0.121 | 0.354 | 1e-19 |
| >sp|O15067|PUR4_HUMAN Phosphoribosylformylglycinamidine synthase OS=Homo sapiens GN=PFAS PE=1 SV=4 | Back alignment and function desciption |
|---|
Score = 209 bits (533), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/189 (55%), Positives = 134/189 (70%), Gaps = 10/189 (5%)
Query: 220 PVQFVGVVTG---SNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIES 276
PV +GV G S +VQGDN +DLDF AVQRGDPEM QK+NRVIRAC+E P NPI S
Sbjct: 455 PVYRIGVGGGAASSVQVQGDNTSDLDFGAVQRGDPEMEQKMNRVIRACVEAPKG-NPICS 513
Query: 277 IHDQGAGGNGNVLKEIVEPVGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCK 336
+HDQGAGGNGNVLKE+ +P GA+++T F LGDP+++ LE+WGAEYQE+NALL + +
Sbjct: 514 LHDQGAGGNGNVLKELSDPAGAIIYTSRFQLGDPTLNALEIWGAEYQESNALLLRSPNRD 573
Query: 337 TLRMISAREKCPVQFVGVVTGSNKIVLAEDKA------KYYSNPSSPLQHPVDIQMELIC 390
L +SARE+CP FVG +TG +IVL +D+ P +PL PVD+++E +
Sbjct: 574 FLTHVSARERCPACFVGTITGDRRIVLVDDRECPVRRNGQGDAPPTPLPTPVDLELEWVL 633
Query: 391 GKMPQKMAF 399
GKMP+K F
Sbjct: 634 GKMPRKEFF 642
|
Homo sapiens (taxid: 9606) EC: 6EC: .EC: 3EC: .EC: 5EC: .EC: 3 |
| >sp|Q5SUR0|PUR4_MOUSE Phosphoribosylformylglycinamidine synthase OS=Mus musculus GN=Pfas PE=2 SV=1 | Back alignment and function description |
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| >sp|P35421|PUR4_DROME Phosphoribosylformylglycinamidine synthase OS=Drosophila melanogaster GN=ade2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q54JC8|PUR4_DICDI Phosphoribosylformylglycinamidine synthase OS=Dictyostelium discoideum GN=purL PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9M8D3|PUR4_ARATH Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=At1g74260 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q19311|PUR4_CAEEL Probable phosphoribosylformylglycinamidine synthase OS=Caenorhabditis elegans GN=F10F2.2 PE=3 SV=3 | Back alignment and function description |
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| >sp|P38972|PUR4_YEAST Phosphoribosylformylglycinamidine synthase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ADE6 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q8PGR7|PUR4_XANAC Phosphoribosylformylglycinamidine synthase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=purL PE=3 SV=1 | Back alignment and function description |
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| >sp|O14228|PUR4_SCHPO Probable phosphoribosylformylglycinamidine synthase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ade3 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q8XYN6|PUR4_RALSO Phosphoribosylformylglycinamidine synthase OS=Ralstonia solanacearum (strain GMI1000) GN=purL PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | ||||||
| 443706574 | 948 | hypothetical protein CAPTEDRAFT_210251, | 0.550 | 0.434 | 0.375 | 9e-72 | |
| 380025190 | 1326 | PREDICTED: phosphoribosylformylglycinami | 0.371 | 0.209 | 0.475 | 7e-59 | |
| 383857210 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.234 | 0.132 | 0.637 | 5e-58 | |
| 242003452 | 1316 | Phosphoribosylformylglycinamidine syntha | 0.329 | 0.187 | 0.405 | 9e-58 | |
| 340722703 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.265 | 0.150 | 0.577 | 2e-57 | |
| 350424352 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.265 | 0.150 | 0.577 | 4e-57 | |
| 345490285 | 1324 | PREDICTED: phosphoribosylformylglycinami | 0.234 | 0.132 | 0.632 | 9e-57 | |
| 328791126 | 1325 | PREDICTED: phosphoribosylformylglycinami | 0.265 | 0.150 | 0.572 | 2e-56 | |
| 322798297 | 1269 | hypothetical protein SINV_11838 [Solenop | 0.267 | 0.157 | 0.560 | 2e-56 | |
| 332028851 | 1326 | Phosphoribosylformylglycinamidine syntha | 0.236 | 0.133 | 0.593 | 1e-55 |
| >gi|443706574|gb|ELU02558.1| hypothetical protein CAPTEDRAFT_210251, partial [Capitella teleta] | Back alignment and taxonomy information |
|---|
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 251/469 (53%), Gaps = 57/469 (12%)
Query: 1 MAIIRYYSKPGIGAGEKTKKLKAVPKV------ISDIESELCYNIEISRELTPVELDKLH 54
M ++R++ +PG+ +G + ++ + I ++ SE C+ +E+ + L+ L+ L
Sbjct: 5 MEVVRFFREPGLSSGLHSSTIQKLESALPGNVKIVNLRSENCFYVEVKKGLSSECLEPLQ 64
Query: 55 WILNSSFECRKLSSHTNFKD----NSNVIEVGPRLNFSTPFCSNVLSICQSIQLHSVTRF 110
W++ + F ++SS +NF D N +IE+GPRLNFST F +N +SIC SI L VTR
Sbjct: 65 WVIQTPFHKNEVSSFSNFDDKKSANQLLIEIGPRLNFSTAFSTNAVSICHSIGLTLVTRI 124
Query: 111 EVSTRYKLISRGHLSRAIITKIV-LAEDKAKY--YSHPSSPLQHPVDIQKGNVLKEIVEP 167
E S R+ L + ++ + +IV L DK + Y+ P Q V + +V V
Sbjct: 125 EASVRFLLDFQDDVAPDLEEQIVSLLHDKMTHCRYTEPIRSFQLAVATE--DVYDVEVME 182
Query: 168 VGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPL-------HCKTL---------- 210
G E+ D + W EY + L C+ + C L
Sbjct: 183 CGKAALKEA---NDHLGLAFDDWDLEYYTD--LFCQKVGRNPTNVECFDLAQSNSEHSRH 237
Query: 211 -----RMISAREKCPVQFVGVV------TGSNKVQGDNAADLDFDAVQRGDPEMGQKLNR 259
RM+ E+ +V + N VQGDNA++LD AVQRGDPEM QK+NR
Sbjct: 238 WFFKGRMVVDGEERSGSLFSMVMDTQCHSNQNNVQGDNASELDLGAVQRGDPEMEQKMNR 297
Query: 260 VIRACIELPNNLNPIESIHDQGAGGNGNVLKEIVEPVGAVVFTESFLLGDPSISTLELWG 319
VIRACIE+ + NPI SIHDQGAGGNGNVLKEI EPVGAV+ SF LGDP++S +E+WG
Sbjct: 298 VIRACIEMHKD-NPICSIHDQGAGGNGNVLKEICEPVGAVINAGSFQLGDPTLSVMEIWG 356
Query: 320 AEYQENNALLCKPLHCKTLRMISAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSS--- 376
AEYQE+NA L + + L I+ REKCP+ FVG +TG KI L +D P S
Sbjct: 357 AEYQESNAFLARKKDRRLLEEIATREKCPISFVGRITGDGKIRLVDDLRLQAIEPDSKKM 416
Query: 377 --PLQHPVDIQMELICGKMPQ---KMAFAGLSGMTVDIPSDVTTSEVLE 420
+ PVD+ ++ + GKMP K+ + TV +P+ +T LE
Sbjct: 417 KKTARDPVDLHLDHVLGKMPTKVFKLDHKDVRLSTVQLPAALTVQNALE 465
|
Source: Capitella teleta Species: Capitella teleta Genus: Capitella Family: Capitellidae Order: Capitellida Class: Polychaeta Phylum: Annelida Superkingdom: Eukaryota |
| >gi|380025190|ref|XP_003696360.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|383857210|ref|XP_003704098.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Megachile rotundata] | Back alignment and taxonomy information |
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| >gi|242003452|ref|XP_002422737.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] gi|212505570|gb|EEB09999.1| Phosphoribosylformylglycinamidine synthase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
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| >gi|340722703|ref|XP_003399743.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Bombus terrestris] | Back alignment and taxonomy information |
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| >gi|350424352|ref|XP_003493767.1| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Bombus impatiens] | Back alignment and taxonomy information |
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| >gi|345490285|ref|XP_001605732.2| PREDICTED: phosphoribosylformylglycinamidine synthase-like [Nasonia vitripennis] | Back alignment and taxonomy information |
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| >gi|328791126|ref|XP_625036.3| PREDICTED: phosphoribosylformylglycinamidine synthase [Apis mellifera] | Back alignment and taxonomy information |
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| >gi|322798297|gb|EFZ20043.1| hypothetical protein SINV_11838 [Solenopsis invicta] | Back alignment and taxonomy information |
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| >gi|332028851|gb|EGI68877.1| Phosphoribosylformylglycinamidine synthase [Acromyrmex echinatior] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 749 | ||||||
| ZFIN|ZDB-GENE-030131-4420 | 1314 | pfas "phosphoribosylformylglyc | 0.265 | 0.151 | 0.502 | 3.9e-108 | |
| UNIPROTKB|O15067 | 1338 | PFAS "Phosphoribosylformylglyc | 0.238 | 0.133 | 0.555 | 1.1e-107 | |
| MGI|MGI:2684864 | 1337 | Pfas "phosphoribosylformylglyc | 0.238 | 0.133 | 0.553 | 1.2e-105 | |
| UNIPROTKB|F1N4K1 | 1338 | PFAS "Uncharacterized protein" | 0.238 | 0.133 | 0.566 | 4.7e-104 | |
| UNIPROTKB|E2QYQ9 | 1341 | PFAS "Uncharacterized protein" | 0.236 | 0.131 | 0.554 | 3.1e-103 | |
| RGD|1304926 | 1271 | Pfas "phosphoribosylformylglyc | 0.265 | 0.156 | 0.521 | 4e-99 | |
| UNIPROTKB|I3L712 | 1338 | PFAS "Uncharacterized protein" | 0.238 | 0.133 | 0.529 | 5.4e-98 | |
| FB|FBgn0000052 | 1354 | ade2 "adenosine 2" [Drosophila | 0.234 | 0.129 | 0.524 | 1.2e-97 | |
| UNIPROTKB|F5GWT9 | 914 | PFAS "Phosphoribosylformylglyc | 0.238 | 0.195 | 0.555 | 1.4e-92 | |
| DICTYBASE|DDB_G0288145 | 1355 | purL "PFAS" [Dictyostelium dis | 0.327 | 0.180 | 0.391 | 4.8e-86 |
| ZFIN|ZDB-GENE-030131-4420 pfas "phosphoribosylformylglycinamidine synthase" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 492 (178.3 bits), Expect = 3.9e-108, Sum P(4) = 3.9e-108
Identities = 104/207 (50%), Positives = 137/207 (66%)
Query: 220 PVQFVGVVTG---SNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIES 276
PV +GV G S +VQGDN++ D AVQRGD EM QK+NR +RAC+E NPI S
Sbjct: 451 PVYRIGVGGGAASSVQVQGDNSSARDLGAVQRGDAEMEQKMNRALRACLERVEG-NPICS 509
Query: 277 IHDQGAGGNGNVLKEIVEPVGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCK 336
IHDQGAGGNGNVLKE+ EP GAV++TE F GDP++S LELWGAEYQE+NALL +P
Sbjct: 510 IHDQGAGGNGNVLKELSEPAGAVIYTEKFKRGDPTLSVLELWGAEYQESNALLLRPSDRS 569
Query: 337 TLRMISAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSSPLQHPVDIQMELICGKMPQK 396
L + REKCPV FVG +TG KIVL + K ++ ++PVD++++ + GKMPQK
Sbjct: 570 FLERVCQREKCPVDFVGKITGDGKIVLVDGLRKQ-NDVLEGARNPVDLELDWVLGKMPQK 628
Query: 397 ---MAFAGLSGMTVDIPSDVTTSEVLE 420
+ +S + +P+ ++ LE
Sbjct: 629 EFILEHRSVSLQPLTLPAGLSVLPALE 655
|
|
| UNIPROTKB|O15067 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2684864 Pfas "phosphoribosylformylglycinamidine synthase (FGAR amidotransferase)" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N4K1 PFAS "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QYQ9 PFAS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| RGD|1304926 Pfas "phosphoribosylformylglycinamidine synthase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3L712 PFAS "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| FB|FBgn0000052 ade2 "adenosine 2" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F5GWT9 PFAS "Phosphoribosylformylglycinamidine synthase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0288145 purL "PFAS" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 6.3.5 | LOW CONFIDENCE prediction! |
| 3rd Layer | 6.3.5.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 749 | |||
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 2e-59 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 2e-54 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 4e-53 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 9e-51 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 4e-43 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 2e-38 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 2e-38 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 3e-36 | |
| pfam13507 | 259 | pfam13507, GATase_5, CobB/CobQ-like glutamine amid | 2e-35 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 6e-34 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 3e-31 | |
| cd02204 | 264 | cd02204, PurL_repeat2, PurL subunit of the formylg | 3e-31 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 1e-21 | |
| cd01740 | 238 | cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotr | 3e-21 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 2e-20 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 5e-20 | |
| PLN03206 | 1307 | PLN03206, PLN03206, phosphoribosylformylglycinamid | 1e-19 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 1e-19 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 9e-17 | |
| pfam02769 | 150 | pfam02769, AIRS_C, AIR synthase related protein, C | 4e-14 | |
| PHA03366 | 1304 | PHA03366, PHA03366, FGAM-synthase; Provisional | 4e-13 | |
| cd02203 | 313 | cd02203, PurL_repeat1, PurL subunit of the formylg | 7e-13 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 3e-12 | |
| COG0047 | 231 | COG0047, PurL, Phosphoribosylformylglycinamidine ( | 6e-12 | |
| TIGR01735 | 1310 | TIGR01735, FGAM_synt, phosphoribosylformylglycinam | 3e-11 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 4e-10 | |
| TIGR01739 | 1202 | TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr | 4e-10 | |
| TIGR01739 | 1202 | TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr | 7e-10 | |
| PHA03366 | 1304 | PHA03366, PHA03366, FGAM-synthase; Provisional | 2e-09 | |
| cd02193 | 272 | cd02193, PurL, Formylglycinamide ribonucleotide am | 6e-09 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 2e-08 | |
| PHA03366 | 1304 | PHA03366, PHA03366, FGAM-synthase; Provisional | 2e-08 | |
| TIGR01736 | 715 | TIGR01736, FGAM_synth_II, phosphoribosylformylglyc | 2e-08 | |
| PRK05297 | 1290 | PRK05297, PRK05297, phosphoribosylformylglycinamid | 3e-08 | |
| cd02204 | 264 | cd02204, PurL_repeat2, PurL subunit of the formylg | 5e-07 | |
| TIGR01739 | 1202 | TIGR01739, tegu_FGAM_synt, herpesvirus tegument pr | 5e-07 | |
| PRK01175 | 261 | PRK01175, PRK01175, phosphoribosylformylglycinamid | 1e-06 | |
| PRK01213 | 724 | PRK01213, PRK01213, phosphoribosylformylglycinamid | 9e-06 | |
| COG0046 | 743 | COG0046, PurL, Phosphoribosylformylglycinamidine ( | 2e-05 |
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (557), Expect = 2e-59
Identities = 90/195 (46%), Positives = 122/195 (62%), Gaps = 6/195 (3%)
Query: 230 SNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIESIHDQGAGGNGNVL 289
S+ V G N A+LDF+AVQRGD EM QKL RV+RAC+E+ + NPI SIHDQGAGGN NV+
Sbjct: 451 SSMVSGQNDAELDFNAVQRGDAEMSQKLYRVVRACVEMGED-NPIVSIHDQGAGGNCNVV 509
Query: 290 KEIVEPVGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCKTLRMISAREKCPV 349
KEI+ P GA + + ++GD ++S LE+WGAEYQE +ALL KP L+ I RE+C +
Sbjct: 510 KEIIYPKGAEIDIRAVVVGDHTLSVLEIWGAEYQEQDALLIKPESRDLLQSICDRERCSM 569
Query: 350 QFVGVVTGSNKIVLAEDKA--KYYSNPSSPLQHPVDIQMELICGKMPQK---MAFAGLSG 404
+G + GS ++VL + A K +N P VD+ +E + G MPQK
Sbjct: 570 AVIGTIDGSGRVVLVDSAAPEKCEANGLPPPPPAVDLDLEKVLGDMPQKTFEFKRVANKL 629
Query: 405 MTVDIPSDVTTSEVL 419
+DIP +T + L
Sbjct: 630 EPLDIPPGITVMDAL 644
|
Length = 1307 |
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222184 pfam13507, GATase_5, CobB/CobQ-like glutamine amidotransferase domain | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|100035 cd02204, PurL_repeat2, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|153211 cd01740, GATase1_FGAR_AT, Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|178745 PLN03206, PLN03206, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|217219 pfam02769, AIRS_C, AIR synthase related protein, C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100034 cd02203, PurL_repeat1, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|223125 COG0047, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|188163 TIGR01735, FGAM_synt, phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100029 cd02193, PurL, Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223058 PHA03366, PHA03366, FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233552 TIGR01736, FGAM_synth_II, phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >gnl|CDD|235394 PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|100035 cd02204, PurL_repeat2, PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >gnl|CDD|233554 TIGR01739, tegu_FGAM_synt, herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >gnl|CDD|234913 PRK01175, PRK01175, phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|234921 PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223124 COG0046, PurL, Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| KOG1907|consensus | 1320 | 100.0 | ||
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 100.0 | |
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 100.0 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 100.0 | |
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 100.0 | |
| PHA03366 | 1304 | FGAM-synthase; Provisional | 100.0 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 100.0 | |
| PLN03206 | 1307 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01735 | 1310 | FGAM_synt phosphoribosylformylglycinamidine syntha | 100.0 | |
| TIGR01857 | 1239 | FGAM-synthase phosphoribosylformylglycinamidine sy | 100.0 | |
| PRK05297 | 1290 | phosphoribosylformylglycinamidine synthase; Provis | 100.0 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 100.0 | |
| KOG1907|consensus | 1320 | 99.95 | ||
| TIGR01739 | 1202 | tegu_FGAM_synt herpesvirus tegument protein/v-FGAM | 99.91 | |
| PHA03366 | 1304 | FGAM-synthase; Provisional | 99.91 | |
| COG0047 | 231 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 99.9 | |
| PF13507 | 259 | GATase_5: CobB/CobQ-like glutamine amidotransferas | 99.9 | |
| COG0046 | 743 | PurL Phosphoribosylformylglycinamidine (FGAM) synt | 99.89 | |
| PRK01175 | 261 | phosphoribosylformylglycinamidine synthase I; Prov | 99.78 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 99.77 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 99.69 | |
| PRK14090 | 601 | phosphoribosylformylglycinamidine synthase II; Pro | 99.55 | |
| cd02193 | 272 | PurL Formylglycinamide ribonucleotide amidotransfe | 99.53 | |
| PRK03619 | 219 | phosphoribosylformylglycinamidine synthase I; Prov | 99.49 | |
| cd01740 | 238 | GATase1_FGAR_AT Type 1 glutamine amidotransferase | 99.47 | |
| PRK01213 | 724 | phosphoribosylformylglycinamidine synthase II; Pro | 99.37 | |
| TIGR01737 | 227 | FGAM_synth_I phosphoribosylformylglycinamidine syn | 99.33 | |
| PF02769 | 153 | AIRS_C: AIR synthase related protein, C-terminal d | 99.3 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 99.18 | |
| TIGR01736 | 715 | FGAM_synth_II phosphoribosylformylglycinamidine sy | 99.0 | |
| PF00586 | 96 | AIRS: AIR synthase related protein, N-terminal dom | 98.93 | |
| cd02203 | 313 | PurL_repeat1 PurL subunit of the formylglycinamide | 98.8 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 98.75 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 98.63 | |
| cd00396 | 222 | PurM-like AIR (aminoimidazole ribonucleotide) synt | 98.57 | |
| cd02204 | 264 | PurL_repeat2 PurL subunit of the formylglycinamide | 98.49 | |
| TIGR03267 | 323 | methan_mark_2 putative methanogenesis marker prote | 98.46 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 98.46 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 98.4 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 98.34 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 98.31 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 98.25 | |
| cd02196 | 297 | PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn | 98.22 | |
| PLN02557 | 379 | phosphoribosylformylglycinamidine cyclo-ligase | 98.17 | |
| cd02196 | 297 | PurM PurM (Aminoimidazole Ribonucleotide [AIR] syn | 98.01 | |
| cd02197 | 293 | HypE HypE (Hydrogenase expression/formation protei | 97.96 | |
| cd06061 | 298 | PurM-like1 AIR synthase (PurM) related protein, su | 97.9 | |
| cd02192 | 283 | PurM-like3 AIR synthase (PurM) related protein, su | 97.88 | |
| TIGR02124 | 320 | hypE hydrogenase expression/formation protein HypE | 97.87 | |
| TIGR00878 | 332 | purM phosphoribosylaminoimidazole synthetase. This | 97.87 | |
| TIGR02124 | 320 | hypE hydrogenase expression/formation protein HypE | 97.83 | |
| PF02769 | 153 | AIRS_C: AIR synthase related protein, C-terminal d | 97.74 | |
| PRK05731 | 318 | thiamine monophosphate kinase; Provisional | 97.66 | |
| TIGR01379 | 317 | thiL thiamine-monophosphate kinase. Proteins scori | 97.64 | |
| cd06061 | 298 | PurM-like1 AIR synthase (PurM) related protein, su | 97.63 | |
| cd02195 | 287 | SelD Selenophosphate synthetase (SelD) catalyzes t | 97.59 | |
| COG0309 | 339 | HypE Hydrogenase maturation factor [Posttranslatio | 97.59 | |
| PRK05385 | 327 | phosphoribosylaminoimidazole synthetase; Provision | 97.58 | |
| TIGR00878 | 332 | purM phosphoribosylaminoimidazole synthetase. This | 97.57 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 97.53 | |
| COG2144 | 324 | Selenophosphate synthetase-related proteins [Gener | 97.48 | |
| cd02197 | 293 | HypE HypE (Hydrogenase expression/formation protei | 97.38 | |
| cd02691 | 346 | PurM-like2 AIR synthase (PurM) related protein, ar | 97.27 | |
| TIGR00302 | 80 | phosphoribosylformylglycinamidine synthase, purS p | 97.16 | |
| PRK06423 | 73 | phosphoribosylformylglycinamidine synthase; Provis | 97.14 | |
| PRK05385 | 327 | phosphoribosylaminoimidazole synthetase; Provision | 97.07 | |
| PRK05974 | 80 | phosphoribosylformylglycinamidine synthase subunit | 97.05 | |
| PRK13526 | 179 | glutamine amidotransferase subunit PdxT; Provision | 96.94 | |
| TIGR00476 | 347 | selD selenium donor protein. In prokaryotes, the i | 96.47 | |
| PRK00943 | 347 | selenophosphate synthetase; Provisional | 96.05 | |
| cd02691 | 346 | PurM-like2 AIR synthase (PurM) related protein, ar | 96.04 | |
| cd02194 | 291 | ThiL ThiL (Thiamine-monophosphate kinase) plays a | 95.88 | |
| PF02700 | 80 | PurS: Phosphoribosylformylglycinamidine (FGAM) syn | 95.55 | |
| PF12818 | 282 | Tegument_dsDNA: dsDNA viral tegument protein; Inte | 95.38 | |
| PRK14105 | 345 | selenophosphate synthetase; Provisional | 95.04 | |
| PRK14105 | 345 | selenophosphate synthetase; Provisional | 94.97 | |
| COG2144 | 324 | Selenophosphate synthetase-related proteins [Gener | 94.83 | |
| COG0309 | 339 | HypE Hydrogenase maturation factor [Posttranslatio | 93.51 | |
| PRK13527 | 200 | glutamine amidotransferase subunit PdxT; Provision | 93.05 | |
| COG0518 | 198 | GuaA GMP synthase - Glutamine amidotransferase dom | 92.37 | |
| TIGR00476 | 347 | selD selenium donor protein. In prokaryotes, the i | 92.2 | |
| PRK06278 | 476 | cobyrinic acid a,c-diamide synthase; Validated | 91.34 | |
| PRK13181 | 199 | hisH imidazole glycerol phosphate synthase subunit | 89.99 | |
| TIGR03800 | 184 | PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, gl | 89.71 | |
| PRK13152 | 201 | hisH imidazole glycerol phosphate synthase subunit | 89.44 | |
| cd01750 | 194 | GATase1_CobQ Type 1 glutamine amidotransferase (GA | 89.34 | |
| PLN02832 | 248 | glutamine amidotransferase subunit of pyridoxal 5' | 89.27 | |
| PLN02557 | 379 | phosphoribosylformylglycinamidine cyclo-ligase | 89.2 | |
| COG0611 | 317 | ThiL Thiamine monophosphate kinase [Coenzyme metab | 89.19 | |
| PRK13143 | 200 | hisH imidazole glycerol phosphate synthase subunit | 89.02 | |
| cd01741 | 188 | GATase1_1 Subgroup of proteins having the Type 1 g | 88.51 | |
| COG0118 | 204 | HisH Glutamine amidotransferase [Amino acid transp | 88.29 | |
| COG1828 | 83 | PurS Phosphoribosylformylglycinamidine (FGAM) synt | 87.82 | |
| PRK05783 | 84 | hypothetical protein; Provisional | 87.52 | |
| CHL00188 | 210 | hisH imidazole glycerol phosphate synthase subunit | 86.84 | |
| cd03130 | 198 | GATase1_CobB Type 1 glutamine amidotransferase (GA | 86.79 | |
| PLN02617 | 538 | imidazole glycerol phosphate synthase hisHF | 86.71 | |
| PRK05665 | 240 | amidotransferase; Provisional | 86.24 | |
| PRK13146 | 209 | hisH imidazole glycerol phosphate synthase subunit | 85.97 | |
| TIGR00888 | 188 | guaA_Nterm GMP synthase (glutamine-hydrolyzing), N | 85.49 | |
| PRK09065 | 237 | glutamine amidotransferase; Provisional | 84.91 | |
| PRK06490 | 239 | glutamine amidotransferase; Provisional | 84.33 | |
| PRK14004 | 210 | hisH imidazole glycerol phosphate synthase subunit | 84.17 | |
| PRK13142 | 192 | hisH imidazole glycerol phosphate synthase subunit | 84.15 | |
| PLN02347 | 536 | GMP synthetase | 83.34 | |
| cd01742 | 181 | GATase1_GMP_Synthase Type 1 glutamine amidotransfe | 83.34 | |
| cd01749 | 183 | GATase1_PB Glutamine Amidotransferase (GATase_I) i | 83.28 | |
| PF07685 | 158 | GATase_3: CobB/CobQ-like glutamine amidotransferas | 82.25 | |
| TIGR00379 | 449 | cobB cobyrinic acid a,c-diamide synthase. This mod | 81.91 | |
| PRK13141 | 205 | hisH imidazole glycerol phosphate synthase subunit | 81.64 | |
| PRK00074 | 511 | guaA GMP synthase; Reviewed | 81.58 | |
| KOG3939|consensus | 312 | 81.37 | ||
| TIGR01855 | 196 | IMP_synth_hisH imidazole glycerol phosphate syntha | 81.1 | |
| TIGR00566 | 188 | trpG_papA glutamine amidotransferase of anthranila | 80.32 |
| >KOG1907|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-158 Score=1323.87 Aligned_cols=619 Identities=41% Similarity=0.688 Sum_probs=563.0
Q ss_pred HHHhhcCCCCccEEEEEEEEEEecCCC-C-C-HHHHHHHHHhhcCcccccccCCCcccCC-CCcEEEEecCCCCCChhhh
Q psy2354 18 TKKLKAVPKVISDIESELCYNIEISRE-L-T-PVELDKLHWILNSSFECRKLSSHTNFKD-NSNVIEVGPRLNFSTPFCS 93 (749)
Q Consensus 18 l~~i~~~~~~v~sv~te~~y~V~~~~~-l-~-~~~~~~L~~LL~~~~~~~~~~~~s~~~~-~~~~veV~PR~g~~spwSs 93 (749)
++++.+......+++.++||++.+... + + ..+.-.|.|||+.|+.. .+..+|++.. ++..|||+||+||+|||||
T Consensus 22 ~k~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~lnl~~~l~~~~~~-sl~~~s~l~~~~~~~ievgPR~~~~tpwst 100 (1320)
T KOG1907|consen 22 LKSFEEEFVRGVSVSVEYCYHVLTQEQLLYSSALDKLNLTWLLHSPLST-SLWKESQLHPEGTKNIEVGPRTGTITPWST 100 (1320)
T ss_pred HHHHHHHhhhhhehhhhhhhHHHHHHHHHhhhhhhHHHHHHHhcccccc-ccccchhcCCCCcceEEEeccCCccccccc
Confidence 777887666667899999999875442 1 1 22222278999999887 5566666654 6777999999999999999
Q ss_pred HHHHHHHHcCCCcccEEEEEEEEEEeecCCccHHhhhhhe-eeecc--ccccCC-CC----------CC---CcccccCc
Q psy2354 94 NVLSICQSIQLHSVTRFEVSTRYKLISRGHLSRAIITKIV-LAEDK--AKYYSH-PS----------SP---LQHPVDIQ 156 (749)
Q Consensus 94 nA~~I~~~~GL~~V~RiEr~rrY~i~~~~~~~~~~~~~~~-llhDr--E~~y~~-P~----------~p---l~~~V~i~ 156 (749)
|||+||++||+++|.|||||+||++++..+..+.+...++ ++||| ||+|.. |. +| +.. ||.+
T Consensus 101 na~nI~~~cG~~dV~RiErg~rylv~~~e~~~e~~~~~f~~~~~DRMTe~ly~~~p~~~~~Fd~~~p~~~v~~~~-~p~~ 179 (1320)
T KOG1907|consen 101 NATNIFEVCGYKDVERIERGIRYLVKFKEPLLENDVKEFLEILYDRMTEALYTNEPPTMVSFDDEEPKPQVEVVF-VPDK 179 (1320)
T ss_pred chhHHHHhcChHHHHHHhhceeEEEEecCccchHHHHHHHHHHHHHHHHHHhccCCCcccccccCCCCccceeee-ccch
Confidence 9999999999999999999999999998888666667788 99999 999865 22 23 444 7777
Q ss_pred C-ch-hHHhhccccCc----------------------------------------------------------------
Q psy2354 157 K-GN-VLKEIVEPVGA---------------------------------------------------------------- 170 (749)
Q Consensus 157 ~-g~-aLe~~N~eLGL---------------------------------------------------------------- 170 (749)
. ++ +|+++|+||||
T Consensus 180 ~~~k~~L~~aNqelGLAld~~dldyy~~~f~~~~kR~PTdVELFd~aQsnSEHsRHwfF~g~~~IDg~k~d~SL~kmIr~ 259 (1320)
T KOG1907|consen 180 QEGKQALEKANQELGLALDQLDLDYYYDLFVEEVKRNPTDVELFDFAQSNSEHSRHWFFRGDWTIDGRKQDKSLFKMIRN 259 (1320)
T ss_pred hhHHHHHHHHHHHhccccCcccHHHHHHHHHHHhcCCCCceeeeeeccccchhhhhheeccceEEecccCchHHHHHHHH
Confidence 7 89 99999999999
Q ss_pred ----------------------------------------------eEEee-----------------------------
Q psy2354 171 ----------------------------------------------VVFTE----------------------------- 175 (749)
Q Consensus 171 ----------------------------------------------~~~~~----------------------------- 175 (749)
++|||
T Consensus 260 T~~~n~~ntiiafsDNssa~~gf~~~~~~~P~s~v~~~~~~~~~~~ll~~aETHN~PtAVsPfpGA~TGtGGrIRD~~at 339 (1320)
T KOG1907|consen 260 THDSNNDNTIIAFSDNSSAIRGFNSVTRFAPNSTVSPWIVIFEPSDLLFKAETHNHPTAVSPFPGATTGTGGRIRDEGAT 339 (1320)
T ss_pred HHhcCCCCceEEeccchHHhhccccceeeccccccccceeecCCcceEEEeeccCCCcccCCCCCCccCCCceeeccccc
Confidence 45555
Q ss_pred -----------eeeecCCCCCCccc-c---cccCcccccc------------------cCCccccccee-----------
Q psy2354 176 -----------SFLLGDPSISTLEL-W---GAEYQENNAL------------------LCKPLHCKTLR----------- 211 (749)
Q Consensus 176 -----------~~~~~~l~~p~~~~-w---~~~~p~~~a~------------------fg~p~~~g~~r----------- 211 (749)
|||||||+||||+| | +++||.|||+ ||||+|+||+|
T Consensus 340 GrGs~~~agtaGysvg~LnipG~~qPwE~l~f~yP~~iA~pl~ImIEAsnGaSdygNkFGeP~I~Gy~rtfg~~v~~~~g 419 (1320)
T KOG1907|consen 340 GRGSYEIAGTAGYSVGDLNIPGYKQPWEDLDFGYPYHIASPLDIMIEASNGASDYGNKFGEPVISGYARTFGMRVLLENG 419 (1320)
T ss_pred cccceeeecccccccccccCCCCCCCCcccccCCccccCCHHHHHhhCcCChhhhcccccchhhhhhhhhhcccccccCc
Confidence 99999999999999 9 7999999999 99999999999
Q ss_pred ---------eEE----------------------EEeeCCccccccccc--cccccCCCCccCCCCccccCChHHHHHHH
Q psy2354 212 ---------MIS----------------------AREKCPVQFVGVVTG--SNKVQGDNAADLDFDAVQRGDPEMGQKLN 258 (749)
Q Consensus 212 ---------m~~----------------------v~~Gg~~~r~G~gG~--Ss~~~~~~~~~~~~~aVQ~gnp~~e~~~q 258 (749)
||| |+||||+||||+||| ||+++|+.++||||+||||||||||||||
T Consensus 420 errey~KPIMfsgGiG~i~~~~~~K~~~apg~~likiGGp~yrIG~GGGAASSv~~G~g~aeLDFaaVQRGdaEM~~kl~ 499 (1320)
T KOG1907|consen 420 ERREYHKPIMFSGGIGTIRKQHARKEPIAPGQLLIKIGGPVYRIGVGGGAASSVVQGEGSAELDFAAVQRGDAEMERKLQ 499 (1320)
T ss_pred cccccccceEeecccCccCHHHhhcCCCCCCCEEEEecCceEEEecccchhhhhhcCCCccccchHHhhcCCHHHHHHHH
Confidence 888 999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCEEEEcccCcccccccccccccC--CCceEEecccccCCCCcChhhhcccccccccccccCcccHH
Q psy2354 259 RVIRACIELPNNLNPIESIHDQGAGGNGNVLKEIVEP--VGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCK 336 (749)
Q Consensus 259 ~vi~~~~~~~~~~~~i~~i~D~GaGG~~na~~El~~~--~G~~i~l~~v~~~~~~ms~~eI~~sEsQEr~~l~v~~~~~~ 336 (749)
||||||.++| +.|||.+||||||||+||+++|||++ .|++|++++|+++||+||||||||+||||||+++|++++++
T Consensus 500 rVvrAC~~lg-e~NpI~sIHDqGAGGn~NvlkELV~~~~~Ga~~~~r~~~~gdpsmS~~EiW~aEyQE~~allv~a~~l~ 578 (1320)
T KOG1907|consen 500 RVVRACAELG-ENNPIQSIHDQGAGGNGNVLKELVEDNDLGATFDSRTFQLGDPSMSPMEIWCAEYQENYALLVKAEDLD 578 (1320)
T ss_pred HHHHHHHHhc-CCCceeEeeccCCCccccccHhhccccCCccEEEeeeeecCCCCCCHHHHhhhhhhhcceeeeCHHHHH
Confidence 9999999999 99999999999999999999999998 89999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCeEEEEEEeCCCCEEEEeccccccCCCCCCCCcccccchhhhhcCCCcc--------------------
Q psy2354 337 TLRMISAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSSPLQHPVDIQMELICGKMPQK-------------------- 396 (749)
Q Consensus 337 ~~~~i~~re~~~~~vVG~~T~~~~l~~~~~~f~~~~~~~~~~~~~vdlp~~~l~~~~p~~-------------------- 396 (749)
.|++||+|||||++|||++|+++|+++.++. -.++++||+|+.++||||||
T Consensus 579 ~le~IckRERcp~svVG~vt~eqR~~l~d~~---------~~~~aidl~~~~llG~~pK~s~~l~~~~~~lk~l~lp~~~ 649 (1320)
T KOG1907|consen 579 ILESICKRERCPVSVVGEVTGEQRVILLDKL---------AKETAIDLEMRQLLGKPPKMSRKLKRAPRVLKKLELPSGL 649 (1320)
T ss_pred HHHHHHHhccCCeeEEEEEccCceEEEecCC---------CCCCccCCchHhhcCCCccccccccccccccccccCCCCC
Confidence 9999999999999999999999999999865 45889999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 650 ~l~dAl~RVL~LpsV~SKrfLttkvDRsVtGLiaqqQ~VGPlqvplADvavt~~S~~~~tG~A~amGeqPik~Lida~a~ 729 (1320)
T KOG1907|consen 650 TLRDALERVLRLPSVASKRFLTTKVDRSVTGLIAQQQCVGPLQVPLADVAVTATSHFDTTGEAVAMGEQPIKALIDAAAS 729 (1320)
T ss_pred hHHHHHHHHhccccccccceeeeeccchhhheeehhhccCcccccceeeeEEEEEEeccccccccccccchHhhhCHHHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 730 ARm~VaE~l~NLv~a~i~sL~dvK~SgNWM~aak~~GEGarlydAv~aL~~~L~eLgiAIdgGKDSlSMa~k~~ge~Vka 809 (1320)
T KOG1907|consen 730 ARMCVAEALMNLVAAKITSLKDVKLSGNWMWAAKHPGEGARLYDAVQALCLGLCELGIAIDGGKDSLSMAMKWDGEVVKA 809 (1320)
T ss_pred hHHHHHHHHHHhHhhcccchhheeeccceeecccCCCcchHHHHHHHHHHHHHHHhceeecCCccchhhheeeCCeEEec
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 810 PgtLvIsayapc~dv~k~vtP~Lk~~~~gs~~~Ll~i~l~~~k~rLGgSaLaQvy~QiG~d~Pdl~~~~~lk~~f~~vqq 889 (1320)
T KOG1907|consen 810 PGTLVISAYAPCPDVTKTVTPDLKANVDGSKTSLLWIDLANSKMRLGGSALAQVYSQIGDDCPDLDNFDELKKFFSVVQQ 889 (1320)
T ss_pred CceEEEEeeccCCCcceeecccccCCCCCCceEEEEEEccccccccchHHHHHHHHHhCCCCCCccchHHHHHHHHHHHH
Confidence
Q ss_pred ------------------------ccccCCccEEEEcCCCCCCCcHHHHhhccccccEEEEccCCHHHHHHHHHHcCCCe
Q psy2354 397 ------------------------MAFAGLSGMTVDIPSDVTTSEVLELLFAEELGWLLEVTNENEAFVLEQFKAANVSC 452 (749)
Q Consensus 397 ------------------------MAfag~~G~~I~L~~~~~~~~p~e~LfSEe~G~VleV~~~~~~~v~~~~~~~gv~~ 452 (749)
|||||++|++|+|+....+..+.++||+||+|+|+||...|+++|+++|+++||.+
T Consensus 890 L~~~~ii~AgHD~SDGGLlvt~lEMAfag~~gi~idl~~~~~~~~~~~~LF~EElG~v~evs~~dl~~v~~~~~~~gv~~ 969 (1320)
T KOG1907|consen 890 LLNEGIILAGHDISDGGLLVTLLEMAFAGNVGIEIDLDSPNQNIKLFDILFAEELGAVLEVSDTDLEKVLEIFSEAGVKC 969 (1320)
T ss_pred HHhcCceeecccccCCchhHHHHHHHhhcccceEEecCCccccccHHHHHHHHhhCeEEEeccccHHHHHHHHHhcCCcc
Confidence 99999999999998643456789999999999999999999999999999999999
Q ss_pred eEeeEeec-CCCCcEEEEEECCEEEEEecHHHHHHHhhhhhHHHHHhhcccchhhHhhhhhcccCCCCcc--cCC-----
Q psy2354 453 KKIGVCDA-FGMNAKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ--YQP----- 524 (749)
Q Consensus 453 ~~IG~vt~-~~~~~~i~I~~~g~~v~~~~~~~L~~~W~~ts~~~~~l~~np~~~~~e~~~~~~~~~p~~~--f~p----- 524 (749)
..||++.. ++.+.++.++.+|.++++.++.+|++.|+.|||+||++|+||+|+++|++.++++.+|.|+ |.|
T Consensus 970 ~~ig~~~~~~g~~~~i~~~~~g~~~~~~~~s~L~~~We~tsy~l~klq~npecae~e~~~i~~~~~p~~~l~~~P~~~~~ 1049 (1320)
T KOG1907|consen 970 EYIGKASAVFGQDAHIKISVNGHLILNEKLSDLREEWELTSYELQKLQDNPECAEVERECIKDNYDPQYDLYYNPAFIHN 1049 (1320)
T ss_pred eeeeeeccccCCCceEEEecCCeEEecchHHHHHHHHHHhHHHHHHHhhCHHHHHHHHhhcccccCCCCceeeCchhhhH
Confidence 99998733 1355899999999999999999999999999999999999999999999999998899887 665
Q ss_pred ---------Ccc-------------------------------ccc--cccCC------------CcccccchHHHHHhh
Q psy2354 525 ---------VRD-------------------------------DIV--GATLG------------KKDALGSAKGWAASL 550 (749)
Q Consensus 525 ---------PkV-------------------------------Dl~--~~sLd------------ygDvlgsgkgwa~si 550 (749)
||| ||+ +.+|| |+||||||||||++|
T Consensus 1050 ~~~~l~s~~PkVAilREeGvNg~rEMa~af~~AgF~~~DVtmtDlL~G~~~ld~frGlaf~GGFSYaDvLgSakGWAasi 1129 (1320)
T KOG1907|consen 1050 EQLFLSSTAPKVAILREEGVNGDREMAAAFYAAGFETVDVTMTDLLAGRHHLDDFRGLAFCGGFSYADVLGSAKGWAASI 1129 (1320)
T ss_pred HHHhhhcCCCceEEeeccccccHHHHHHHHHHcCCceeeeeeehhhcCceeHhHhcceeeecCcchHhhhccccchhhhe
Confidence 887 776 55664 999999999999999
Q ss_pred ccChhHHHHHHHHHhCCCCeeEeeechhhhhhccCccccCcCCcCcccccccccccCCCcceeeeEEEEecCCCcccccC
Q psy2354 551 LLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQDKNNLVTDVMLSHNNSERFECRYSTVKIMKSPAIMLRN 630 (749)
Q Consensus 551 L~n~~~~~~f~~f~~r~dtf~LGICnGcQ~L~~~~lIp~~~g~~~~~~p~~~~~~N~s~rfEsr~~~V~I~~s~Sv~l~g 630 (749)
|+|+.++.||++||+|+|||+||||||||+|+++|||+. +. +.||.+.|.||.|+||||||.+|+|..++||||.|
T Consensus 1130 l~ne~v~~QF~~F~~R~DtFslGiCNGCQlms~Lg~i~p--~~--~~~p~~~l~~Nes~rfE~r~~~vkI~~~~SIml~g 1205 (1320)
T KOG1907|consen 1130 LFNESVRSQFEAFFNRQDTFSLGICNGCQLMSRLGWIGP--EV--GKWPDVFLDHNESGRFECRFGMVKIESNVSIMLSG 1205 (1320)
T ss_pred eeChhHHHHHHHHhcCCCceeeecccHhHHHHHhcccCc--cc--cCCCceeeecccccceeeeEEEEEeCCCchhhhcc
Confidence 999999999999999999999999999999999999995 33 46998889999999999999999999999999999
Q ss_pred CCCceeeEEeecccceeeEeee
Q psy2354 631 LENSVLGVWVAHGEVMLRGAAT 652 (749)
Q Consensus 631 m~Gsvlpi~vaHGeGr~~~~a~ 652 (749)
|+||+||||++|||||++|...
T Consensus 1206 M~gs~LgvwvAHGEGRa~f~~e 1227 (1320)
T KOG1907|consen 1206 MAGSVLGVWVAHGEGRATFRSE 1227 (1320)
T ss_pred ccCCceeeEEEecccceecCcH
Confidence 9999999999999999998754
|
|
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >PHA03366 FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >PLN03206 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01735 FGAM_synt phosphoribosylformylglycinamidine synthase, single chain form | Back alignment and domain information |
|---|
| >TIGR01857 FGAM-synthase phosphoribosylformylglycinamidine synthase, clade II | Back alignment and domain information |
|---|
| >PRK05297 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >KOG1907|consensus | Back alignment and domain information |
|---|
| >TIGR01739 tegu_FGAM_synt herpesvirus tegument protein/v-FGAM-synthase | Back alignment and domain information |
|---|
| >PHA03366 FGAM-synthase; Provisional | Back alignment and domain information |
|---|
| >COG0047 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PF13507 GATase_5: CobB/CobQ-like glutamine amidotransferase domain; PDB: 3D54_L 3UMM_A 3UJN_A 3UGJ_A 1T3T_A | Back alignment and domain information |
|---|
| >COG0046 PurL Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >PRK14090 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway | Back alignment and domain information |
|---|
| >PRK03619 phosphoribosylformylglycinamidine synthase I; Provisional | Back alignment and domain information |
|---|
| >cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase | Back alignment and domain information |
|---|
| >PRK01213 phosphoribosylformylglycinamidine synthase II; Provisional | Back alignment and domain information |
|---|
| >TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I | Back alignment and domain information |
|---|
| >PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >TIGR01736 FGAM_synth_II phosphoribosylformylglycinamidine synthase II | Back alignment and domain information |
|---|
| >PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >cd02203 PurL_repeat1 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), first repeat | Back alignment and domain information |
|---|
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
| >cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein | Back alignment and domain information |
|---|
| >cd02204 PurL_repeat2 PurL subunit of the formylglycinamide ribonucleotide amidotransferase (FGAR-AT), second repeat | Back alignment and domain information |
|---|
| >TIGR03267 methan_mark_2 putative methanogenesis marker protein 2 | Back alignment and domain information |
|---|
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
| >cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis | Back alignment and domain information |
|---|
| >PLN02557 phosphoribosylformylglycinamidine cyclo-ligase | Back alignment and domain information |
|---|
| >cd02196 PurM PurM (Aminoimidazole Ribonucleotide [AIR] synthetase), one of eleven enzymes required for purine biosynthesis, catalyzes the conversion of formylglycinamide ribonucleotide (FGAM) and ATP to AIR, ADP, and Pi, the fifth step in de novo purine biosynthesis | Back alignment and domain information |
|---|
| >cd02197 HypE HypE (Hydrogenase expression/formation protein) | Back alignment and domain information |
|---|
| >cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function | Back alignment and domain information |
|---|
| >cd02192 PurM-like3 AIR synthase (PurM) related protein, subgroup 3 of unknown function | Back alignment and domain information |
|---|
| >TIGR02124 hypE hydrogenase expression/formation protein HypE | Back alignment and domain information |
|---|
| >TIGR00878 purM phosphoribosylaminoimidazole synthetase | Back alignment and domain information |
|---|
| >TIGR02124 hypE hydrogenase expression/formation protein HypE | Back alignment and domain information |
|---|
| >PF02769 AIRS_C: AIR synthase related protein, C-terminal domain; InterPro: IPR010918 This entry includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP | Back alignment and domain information |
|---|
| >PRK05731 thiamine monophosphate kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01379 thiL thiamine-monophosphate kinase | Back alignment and domain information |
|---|
| >cd06061 PurM-like1 AIR synthase (PurM) related protein, subgroup 1 of unknown function | Back alignment and domain information |
|---|
| >cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes | Back alignment and domain information |
|---|
| >COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05385 phosphoribosylaminoimidazole synthetase; Provisional | Back alignment and domain information |
|---|
| >TIGR00878 purM phosphoribosylaminoimidazole synthetase | Back alignment and domain information |
|---|
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >COG2144 Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd02197 HypE HypE (Hydrogenase expression/formation protein) | Back alignment and domain information |
|---|
| >cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function | Back alignment and domain information |
|---|
| >TIGR00302 phosphoribosylformylglycinamidine synthase, purS protein | Back alignment and domain information |
|---|
| >PRK06423 phosphoribosylformylglycinamidine synthase; Provisional | Back alignment and domain information |
|---|
| >PRK05385 phosphoribosylaminoimidazole synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK05974 phosphoribosylformylglycinamidine synthase subunit PurS; Reviewed | Back alignment and domain information |
|---|
| >PRK13526 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
| >TIGR00476 selD selenium donor protein | Back alignment and domain information |
|---|
| >PRK00943 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function | Back alignment and domain information |
|---|
| >cd02194 ThiL ThiL (Thiamine-monophosphate kinase) plays a dual role in de novo biosynthesis and in salvage of exogenous thiamine | Back alignment and domain information |
|---|
| >PF02700 PurS: Phosphoribosylformylglycinamidine (FGAM) synthase; InterPro: IPR003850 Phosphoribosylformylglycinamidine(FGAM) synthetase, 6 | Back alignment and domain information |
|---|
| >PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus | Back alignment and domain information |
|---|
| >PRK14105 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >PRK14105 selenophosphate synthetase; Provisional | Back alignment and domain information |
|---|
| >COG2144 Selenophosphate synthetase-related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13527 glutamine amidotransferase subunit PdxT; Provisional | Back alignment and domain information |
|---|
| >COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00476 selD selenium donor protein | Back alignment and domain information |
|---|
| >PRK06278 cobyrinic acid a,c-diamide synthase; Validated | Back alignment and domain information |
|---|
| >PRK13181 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >TIGR03800 PLP_synth_Pdx2 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 | Back alignment and domain information |
|---|
| >PRK13152 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >cd01750 GATase1_CobQ Type 1 glutamine amidotransferase (GATase1) domain found in Cobyric Acid Synthase (CobQ) | Back alignment and domain information |
|---|
| >PLN02832 glutamine amidotransferase subunit of pyridoxal 5'-phosphate synthase complex | Back alignment and domain information |
|---|
| >PLN02557 phosphoribosylformylglycinamidine cyclo-ligase | Back alignment and domain information |
|---|
| >COG0611 ThiL Thiamine monophosphate kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
| >PRK13143 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain | Back alignment and domain information |
|---|
| >COG0118 HisH Glutamine amidotransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1828 PurS Phosphoribosylformylglycinamidine (FGAM) synthase, PurS component [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05783 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >CHL00188 hisH imidazole glycerol phosphate synthase subunit hisH; Provisional | Back alignment and domain information |
|---|
| >cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase | Back alignment and domain information |
|---|
| >PLN02617 imidazole glycerol phosphate synthase hisHF | Back alignment and domain information |
|---|
| >PRK05665 amidotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13146 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >TIGR00888 guaA_Nterm GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit | Back alignment and domain information |
|---|
| >PRK09065 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK06490 glutamine amidotransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14004 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >PRK13142 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >PLN02347 GMP synthetase | Back alignment and domain information |
|---|
| >cd01742 GATase1_GMP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in GMP synthetase | Back alignment and domain information |
|---|
| >cd01749 GATase1_PB Glutamine Amidotransferase (GATase_I) involved in pyridoxine biosynthesis | Back alignment and domain information |
|---|
| >PF07685 GATase_3: CobB/CobQ-like glutamine amidotransferase domain; InterPro: IPR011698 This group of enzymes was suggested to be related to the MinD family of ATPases involved in regulation of cell division in bacteria and archaea [] | Back alignment and domain information |
|---|
| >TIGR00379 cobB cobyrinic acid a,c-diamide synthase | Back alignment and domain information |
|---|
| >PRK13141 hisH imidazole glycerol phosphate synthase subunit HisH; Provisional | Back alignment and domain information |
|---|
| >PRK00074 guaA GMP synthase; Reviewed | Back alignment and domain information |
|---|
| >KOG3939|consensus | Back alignment and domain information |
|---|
| >TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | Back alignment and domain information |
|---|
| >TIGR00566 trpG_papA glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 749 | ||||
| 1t3t_A | 1303 | Structure Of Formylglycinamide Synthetase Length = | 4e-16 | ||
| 1t3t_A | 1303 | Structure Of Formylglycinamide Synthetase Length = | 6e-15 | ||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 4e-16 | ||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 1e-15 | ||
| 3ugj_A | 1303 | Formyl Glycinamide Ribonucletide Amidotransferase F | 6e-15 |
| >pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 | Back alignment and structure |
|
| >pdb|1T3T|A Chain A, Structure Of Formylglycinamide Synthetase Length = 1303 | Back alignment and structure |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
| >pdb|3UGJ|A Chain A, Formyl Glycinamide Ribonucletide Amidotransferase From Salmonella Typhimurum: Role Of The Atp Complexation And Glutaminase Domain In Catalytic Coupling Length = 1303 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
Score = 149 bits (377), Expect = 3e-37
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 12/175 (6%)
Query: 224 VGVVTGSNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIESIHDQGAG 283
+G S+ G + ADLDF +VQR +PEM ++ VI C +L + NPI IHD GAG
Sbjct: 456 LGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDA-NPILFIHDVGAG 514
Query: 284 GNGNVLKEIVEP--VGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCKTLRMI 341
G N + E+V G L +P +S LE+W E QE L +
Sbjct: 515 GLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL 574
Query: 342 SAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSSPLQHPVDIQMELICGKMPQK 396
RE+ P +G T + L ++ P+D+ ++++ GK P+
Sbjct: 575 CKRERAPYAVIGDATEEQHLSLHDNHFD---------NQPIDLPLDVLLGKTPKM 620
|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* Length = 1303 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* Length = 615 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| 3ugj_A | 1303 | Phosphoribosylformylglycinamidine synthase; amidot | 100.0 | |
| 3ac6_A | 725 | Phosphoribosylformylglycinamidine synthase 2; puri | 100.0 | |
| 1vk3_A | 615 | Phosphoribosylformylglycinamidine synthase II; TM1 | 100.0 | |
| 3ugj_A | 1303 | Phosphoribosylformylglycinamidine synthase; amidot | 100.0 | |
| 1vk3_A | 615 | Phosphoribosylformylglycinamidine synthase II; TM1 | 99.02 | |
| 3ac6_A | 725 | Phosphoribosylformylglycinamidine synthase 2; puri | 98.82 | |
| 2yxz_A | 311 | Thiamin-monophosphate kinase; alpha/beta structure | 98.68 | |
| 3vti_C | 314 | Hydrogenase maturation factor; transferase, carbam | 98.67 | |
| 2z1e_A | 338 | Hydrogenase expression/formation protein HYPE; [NI | 98.51 | |
| 2yyd_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 98.44 | |
| 2rb9_A | 334 | HYPE protein; hydrogenase maturation, dimer, enzym | 98.32 | |
| 3fd5_A | 394 | Selenide, water dikinase 1; selenophosphate synthe | 98.28 | |
| 3u0o_A | 347 | Selenide, water dikinase; ATP binding protein, sel | 98.26 | |
| 3c9u_A | 342 | Thiamine monophosphate kinase; beta barrel, alpha- | 98.24 | |
| 2v9y_A | 334 | Phosphoribosylformylglycinamidine cyclo-ligase; mu | 98.22 | |
| 3mcq_A | 319 | Thiamine-monophosphate kinase; structural genomics | 98.18 | |
| 2z1u_A | 343 | Hydrogenase expression/formation protein HYPE; alp | 98.17 | |
| 3m84_A | 350 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 98.11 | |
| 3vti_C | 314 | Hydrogenase maturation factor; transferase, carbam | 98.08 | |
| 2rb9_A | 334 | HYPE protein; hydrogenase maturation, dimer, enzym | 98.04 | |
| 2btu_A | 346 | Phosphoribosyl-aminoimidazole synthetase; synthase | 97.98 | |
| 2z1u_A | 343 | Hydrogenase expression/formation protein HYPE; alp | 97.9 | |
| 2z1e_A | 338 | Hydrogenase expression/formation protein HYPE; [NI | 97.89 | |
| 2z01_A | 348 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 97.86 | |
| 2btu_A | 346 | Phosphoribosyl-aminoimidazole synthetase; synthase | 97.78 | |
| 3p4e_A | 349 | Phosphoribosylformylglycinamidine cyclo-ligase; st | 97.77 | |
| 3fd5_A | 394 | Selenide, water dikinase 1; selenophosphate synthe | 97.75 | |
| 3mcq_A | 319 | Thiamine-monophosphate kinase; structural genomics | 97.75 | |
| 2yyd_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 97.74 | |
| 2v9y_A | 334 | Phosphoribosylformylglycinamidine cyclo-ligase; mu | 97.73 | |
| 2z01_A | 348 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 97.73 | |
| 2yxz_A | 311 | Thiamin-monophosphate kinase; alpha/beta structure | 97.72 | |
| 2zod_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 97.7 | |
| 3u0o_A | 347 | Selenide, water dikinase; ATP binding protein, sel | 97.61 | |
| 2zod_A | 345 | Selenide, water dikinase; FULL-length selenophosph | 97.6 | |
| 3d54_D | 213 | Phosphoribosylformylglycinamidine synthase 1; alph | 97.59 | |
| 3m84_A | 350 | Phosphoribosylformylglycinamidine cyclo-ligase; al | 97.26 | |
| 3p4e_A | 349 | Phosphoribosylformylglycinamidine cyclo-ligase; st | 97.21 | |
| 1t4a_A | 84 | PURS; tetramer, complex formyl glycinamide synthet | 96.51 | |
| 1gtd_A | 85 | MTH169; synthetase, FGAM synthetase, purine synthe | 96.26 | |
| 1vq3_A | 94 | Phosphoribosylformylglycinamidine synthase, PURS; | 96.23 | |
| 2zw2_A | 92 | Putative uncharacterized protein STS178; purine me | 96.08 | |
| 2yx5_A | 83 | UPF0062 protein MJ1593; anti parallel beta sheet, | 96.05 | |
| 3c9u_A | 342 | Thiamine monophosphate kinase; beta barrel, alpha- | 95.46 | |
| 2dgb_A | 84 | Hypothetical protein PURS; purine, structural geno | 94.58 | |
| 3mdo_A | 389 | Putative phosphoribosylformylglycinamidine cyclo-; | 91.27 | |
| 3kiz_A | 394 | Phosphoribosylformylglycinamidine cyclo-ligase; ST | 90.01 | |
| 3kiz_A | 394 | Phosphoribosylformylglycinamidine cyclo-ligase; ST | 88.81 | |
| 4gud_A | 211 | Imidazole glycerol phosphate synthase subunit His; | 88.01 | |
| 3uow_A | 556 | GMP synthetase; structural genomics consortium, SG | 87.94 | |
| 3tqi_A | 527 | GMP synthase [glutamine-hydrolyzing]; ligase; 2.84 | 86.31 | |
| 2abw_A | 227 | PDX2 protein, glutaminase; PLP-synthase, vitamin B | 85.26 | |
| 3fij_A | 254 | LIN1909 protein; 11172J, uncharacterized protein, | 85.2 | |
| 3l7n_A | 236 | Putative uncharacterized protein; glutamine amidot | 83.9 | |
| 2ywd_A | 191 | Glutamine amidotransferase subunit PDXT; pyridoxin | 82.96 | |
| 3mdo_A | 389 | Putative phosphoribosylformylglycinamidine cyclo-; | 82.75 | |
| 2vpi_A | 218 | GMP synthase; guanine monophosphate synthetase, ph | 82.5 | |
| 1gpm_A | 525 | GMP synthetase, XMP aminase; class I glutamine ami | 82.3 | |
| 2ywb_A | 503 | GMP synthase [glutamine-hydrolyzing]; GMP syntheta | 80.86 |
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-113 Score=1051.57 Aligned_cols=618 Identities=27% Similarity=0.467 Sum_probs=540.3
Q ss_pred EEEEcCCCCCChHHH---HHHhhcCCCCccEEEEEEEEEEecCCCCCHHHHHHHHHhhcCcccccccCCCcccCCCCcEE
Q psy2354 3 IIRYYSKPGIGAGEK---TKKLKAVPKVISDIESELCYNIEISRELTPVELDKLHWILNSSFECRKLSSHTNFKDNSNVI 79 (749)
Q Consensus 3 ~~~~~~~~als~~~~---l~~i~~~~~~v~sv~te~~y~V~~~~~l~~~~~~~L~~LL~~~~~~~~~~~~s~~~~~~~~v 79 (749)
|++|.|.||||+|+. ++++++..+.|.+|+++|||+|++.++|++++.++|.|||+| .+..... ...+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~--~~~~~~~----~~~~~~~ 83 (1303)
T 3ugj_A 10 MEILRGSPALSAFRINKLLARFQAANLQVHNIYAEYVHFADLNAPLNDSEQAQLTRLLQY--GPALSSH----TPAGKLL 83 (1303)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHTTCCCCEEEEEEEEEEEESSCCCHHHHHHHHHHTCC--SCCCCCC----CCCSEEE
T ss_pred EEEeCCCccCCHHHHHHHHHHHHhcCCCccEEEEEEEEEEecCCCCCHHHHHHHHHHhcC--Ccccccc----CCCcceE
Confidence 788999999999998 888999888899999999999998899999999999999987 3322111 1135679
Q ss_pred EEecCCCCCChhhhHHHHHHHHcCCCcccEEEEEEEEEEeecCCccHHhhhhhe-eeecc--ccccCC---CC-------
Q psy2354 80 EVGPRLNFSTPFCSNVLSICQSIQLHSVTRFEVSTRYKLISRGHLSRAIITKIV-LAEDK--AKYYSH---PS------- 146 (749)
Q Consensus 80 eV~PR~g~~spwSsnA~~I~~~~GL~~V~RiEr~rrY~i~~~~~~~~~~~~~~~-llhDr--E~~y~~---P~------- 146 (749)
+|+|||||+||||||||+|||+|||+.|+||||+++|+|.+. +.+.++++++. ++||| |++|.. |.
T Consensus 84 ~v~pr~g~~spwss~a~~i~~~~gl~~v~rie~~~~~~~~~~-~~~~~~~~~~~~~l~d~m~e~~~~~~~~~~~lf~~~~ 162 (1303)
T 3ugj_A 84 LVTPRPGTISPWSSKATDIAHNCGLQQVDRLERGVAYYIEAS-TLTAEQWRQVAAELHDRMMETVFSSLTDAEKLFIHHQ 162 (1303)
T ss_dssp EEEECTTCCCHHHHHHHHHHHHTTCTTEEEEEEEEEEEEECT-TCCHHHHHHHHHHTSCTTTEEEESSGGGGGGGGCCCC
T ss_pred EEEcCCCcCChhHHHHHHHHHHcCCcccceEEEEEEEEEecC-CCCHHHHHHHHHhcCCCCccEEecCchhhhhhcccCC
Confidence 999999999999999999999999988999999999999743 34556677788 99999 888754 11
Q ss_pred -CCCcccccCcC-ch-hHHhhccccCc-----------------------------------------------------
Q psy2354 147 -SPLQHPVDIQK-GN-VLKEIVEPVGA----------------------------------------------------- 170 (749)
Q Consensus 147 -~pl~~~V~i~~-g~-aLe~~N~eLGL----------------------------------------------------- 170 (749)
+|+.+ ||+++ |+ +|+++|+++||
T Consensus 163 p~~~~~-v~~~~~~~~~L~~~~~~~gLaL~~~e~~~i~~~f~~lgR~Pt~~El~~~~~~wSEHCrhk~f~~~~~id~~~~ 241 (1303)
T 3ugj_A 163 PAPVSS-VDLLGEGRQALIDANLRLGLALAEDEIDYLQEAFTKLGRNPNDIELYMFAQANSEHCRHKIFNADWIIDGKPQ 241 (1303)
T ss_dssp CCCCCB-CCHHHHTTHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTSCCBHHHHHHHHHHTSHHHHCHHHHSEEEETTEEE
T ss_pred CCceeE-EeCCCCCHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhhhccccccCCceEEcCccc
Confidence 56999 99999 99 99999999998
Q ss_pred -------------------------------------------------------eEEee--------------------
Q psy2354 171 -------------------------------------------------------VVFTE-------------------- 175 (749)
Q Consensus 171 -------------------------------------------------------~~~~~-------------------- 175 (749)
++||+
T Consensus 242 ~~~l~~~i~~t~~~~~~~~~~~~~dna~vi~~~~~~~~~~~~~~~~~~~~~e~~~v~fK~ETHNHPsaIePf~GAaTGvG 321 (1303)
T 3ugj_A 242 PKSLFKMIKNTFETTPDYVLSAYKDNAAVMEGSAVGRYFADHNTGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSG 321 (1303)
T ss_dssp SSCHHHHHHHHHHHCCTTEEECSSSSSEEEEEEEEEEEEECTTTCBEEEEEEEEEEEEEEEECHHHHHHCHHHHHHHHHH
T ss_pred chhHHHHHHHHHHhCCCcEEEEecCccEEeeecccccccccCCccccccccceeEEEEEEeccCCCCccCCcCcccceeE
Confidence 23344
Q ss_pred --------------------eeeecCCCCCCccc-c--cccCcccccc------------------cCCccccccee---
Q psy2354 176 --------------------SFLLGDPSISTLEL-W--GAEYQENNAL------------------LCKPLHCKTLR--- 211 (749)
Q Consensus 176 --------------------~~~~~~l~~p~~~~-w--~~~~p~~~a~------------------fg~p~~~g~~r--- 211 (749)
+||||+|++|++.+ | .+++|.|+++ ||+|+|+||+|
T Consensus 322 G~iRD~~~~G~GarPiA~~~~~~~~~lr~~~~~~p~e~~~g~p~~~~~~~~i~~~g~~G~s~ygN~~Gvp~V~G~~~~~~ 401 (1303)
T 3ugj_A 322 GEIRDEGATGRGAKPKAGLVGFSVSNLRIPGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALTGYFRTYE 401 (1303)
T ss_dssp HHHHHHHTSTTCCEEEEEEEEEEESCCCCTTCCCTTCCCCCCCTTSCCHHHHHHHHHHHHHHHHHHHTCCEEEEEEEECE
T ss_pred EEEEchhccCCCCEeeeeeeeeeeccccCCCCCCccccccCCchhccChhhhhhcccchHHHHHHhcCCCCcceEEEEEe
Confidence 99999999999999 9 5899999776 99999999983
Q ss_pred ------------------eEE----------------------EEeeCCccccccccc--cccccCCCCccCCCCccccC
Q psy2354 212 ------------------MIS----------------------AREKCPVQFVGVVTG--SNKVQGDNAADLDFDAVQRG 249 (749)
Q Consensus 212 ------------------m~~----------------------v~~Gg~~~r~G~gG~--Ss~~~~~~~~~~~~~aVQ~g 249 (749)
|++ |++||||||||+||+ ||+.+++.++++||++||+|
T Consensus 402 ~~~~~~~~~~~~g~~kp~v~~~gvG~i~~~~~~~~~~~~Gd~Iiv~Gg~tgr~G~gGaa~sS~~~~~~~~~~~~~~VQ~g 481 (1303)
T 3ugj_A 402 EKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEIVVGAKLIVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRD 481 (1303)
T ss_dssp EEEEETTEEEEEECSSCEEEEEEEEEECGGGSSCCCCCTTCEEEEEECCBCTTCC-----------------CGGGCCCC
T ss_pred eeccccccccccccCCceeEEEEEEEEehHHcccccCCCCCEEEEECCCCCcccCcHHHHhHHhhcccccccCchhhccC
Confidence 333 999999999999999 88998888788999999999
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCEEEEcccCcccccccccccccC--CCceEEecccccCCCCcChhhhcccccccccc
Q psy2354 250 DPEMGQKLNRVIRACIELPNNLNPIESIHDQGAGGNGNVLKEIVEP--VGAVVFTESFLLGDPSISTLELWGAEYQENNA 327 (749)
Q Consensus 250 np~~e~~~q~vi~~~~~~~~~~~~i~~i~D~GaGG~~na~~El~~~--~G~~i~l~~v~~~~~~ms~~eI~~sEsQEr~~ 327 (749)
||+|||++|+||++|++++ +.++|.+|||+|+||+++++.||++. +|++|++++||+++++|+|+|||++||||||+
T Consensus 482 ~p~~ek~~~~li~~~lel~-~~~~V~a~~D~t~GGL~~~l~Ema~~sgvG~~Idld~vP~~~~gl~p~ei~~sesqerml 560 (1303)
T 3ugj_A 482 NPEMERRCQEVIDRCWQLG-DANPILFIHDVGAGGLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYV 560 (1303)
T ss_dssp CHHHHHHHHHHHHHHHTTG-GGCCEEEEEECCTTTHHHHHHHHHHHTTCEEEEEGGGSCBSCTTCCHHHHHHCCCSSEEE
T ss_pred CHHHHHHHHHHHHHHHHHh-ccCCeeEEEECCCcHHHHHHHHHHHHcCCeEEEEhhhCCCCccCCCHHHHHhCcCcceEE
Confidence 9999999999999999999 99999999999999999999999985 79999999999999999999999999999999
Q ss_pred cccCcccHHHHHHHHhhcCCCeEEEEEEeCCCCEEEEeccccccCCCCCCCCcccccchhhhhcCCCcc-----------
Q psy2354 328 LLCKPLHCKTLRMISAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSSPLQHPVDIQMELICGKMPQK----------- 396 (749)
Q Consensus 328 l~v~~~~~~~~~~i~~re~~~~~vVG~~T~~~~l~~~~~~f~~~~~~~~~~~~~vdlp~~~l~~~~p~~----------- 396 (749)
++|+|++.+.|.++|+++++++++||++|+++++++.+.. .++.++|||+++|++++|++
T Consensus 561 ~~V~pe~~~~~~~~~~~~g~~a~vIG~Vt~~~~v~l~~~~---------~g~~v~dlp~~~L~~~~p~~~~~~~~~~~~~ 631 (1303)
T 3ugj_A 561 LAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNH---------FDNQPIDLPLDVLLGKTPKMTRDVQTLKAKG 631 (1303)
T ss_dssp EEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEETT---------TTEEEEEEEHHHHTCCCCCCEEEECCCCCCC
T ss_pred EEECHHHHHHHHHHHHHcCCCeEEEEEEecCCeEEEEECC---------CCeEEEecchhhhcCCCCceeccccccCccc
Confidence 9999999999999999999999999999999999998854 47788888888888888765
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 632 ~~~~~~~~~~~~~l~~vL~~pnvaSK~~l~~~~D~~V~g~tv~~~~vGp~q~p~~DaAVi~~~~~~~~gla~s~g~~p~~ 711 (1303)
T 3ugj_A 632 DALNRADITIADAVKRVLHLPTVAEKTFLVTIGDRTVTGMVARDQMVGPWQVPVADCAVTTASLDSYYGEAMSIGERAPV 711 (1303)
T ss_dssp CCCCCTTCCHHHHHHHHTTSTTTSCCHHHHTTSCSCTTSCEEECSEETTTTEECCSSEEEESSTTCSCEEEEEEEECGGG
T ss_pred cccCcCcCCHHHHHHHHhcCCcccchhhHHHhcCcccCcceeeeccccCCCCCCCCeEEEEEeCCCCeEEEEEEecCCCc
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 712 ~~~dP~~ga~~AVaealsnlaA~Ga~pl~~v~lsln~~~~~g~P~~~~~L~~a~~g~~~d~c~~lgvpiiGGkdSlsn~t 791 (1303)
T 3ugj_A 712 ALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANWMAAAGHPGEDAGLYDAVKAVGEELCPQLGLTIPVGKDSMSMKT 791 (1303)
T ss_dssp GGTCHHHHHHHHHHHHHHHHTTSCCCSGGGCEEEEEEECBTTSTTHHHHHHHHHHHHHTTHHHHHTCEEEEEEEECBCEE
T ss_pred cccCHHHHHHHHHHHHHHHhhcCCCccHHHeEeecccccccCCCchHHHHHHHHHHHHHHHHHHcCCCeeeccccCccce
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy2354 397 -------------------------------------------------------------------------------- 396 (749)
Q Consensus 397 -------------------------------------------------------------------------------- 396 (749)
T Consensus 792 ~~~~~g~~~~v~~P~TlvitavG~v~dv~~~vt~~~k~~Gd~LilV~lg~~~~~LGGS~la~~~g~~g~~~P~vd~~~~l 871 (1303)
T 3ugj_A 792 RWQEGNEQREMTSPLSLVISAFARVEDVRHTLTPQLSTEDNALLLIDLGKGHNALGATALAQVYRQLGDKPADVRDVAQL 871 (1303)
T ss_dssp EECCC--CEEEECCCEEEEEEEEEESCGGGCCCSCCCCSSEEEEEEETTTTCCCCTTSHHHHHTTCCCSCCCCCCCHHHH
T ss_pred ecccCCCcCccCCCCceEEEEEEECCCcCcccCcccCCCCCEEEEEECCCCCCCccHHHHHHHhCcccCCCCCCCCHHHH
Confidence
Q ss_pred ---------------------------------ccccCCccEEEEcCCCCCCCcHHHHhhccccccEEEEccCCHHHHHH
Q psy2354 397 ---------------------------------MAFAGLSGMTVDIPSDVTTSEVLELLFAEELGWLLEVTNENEAFVLE 443 (749)
Q Consensus 397 ---------------------------------MAfag~~G~~I~L~~~~~~~~p~e~LfSEe~G~VleV~~~~~~~v~~ 443 (749)
|||++++|++|+++.. ..++++.||+|++|.|++|++++.+++++
T Consensus 872 k~~~~~v~~li~~G~v~AahDvSdGGLa~aL~Ema~as~vG~~Idl~~i--p~~~~~~LF~E~~G~vv~V~~~~~~~v~~ 949 (1303)
T 3ugj_A 872 KGFYDAMQALVAARKLLAWHDRSDGGLLVTLAEMAFAGHCGVQVDIAAL--GDDHLAALFNEELGGVIQVRAEDRDAVEA 949 (1303)
T ss_dssp HHHHHHHHHHHHTTCCSEEEECCTTHHHHHHHHHHHHHTSEEEEECGGG--CSCHHHHHHCCCSEEEEEEEGGGHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCChHHHHHHHHHHhCCceEEEEecCC--CCchhHHHhCCCCCeEEEEEHHHHHHHHH
Confidence 9999999999999743 23568899999999999999999999999
Q ss_pred HHHHcCCC--eeEeeEeecCCCCcEEEEEECCEEEEEecHHHHHHHhhhhhHHHHHhhcccchhhHhhhhhcccCCCCcc
Q psy2354 444 QFKAANVS--CKKIGVCDAFGMNAKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ 521 (749)
Q Consensus 444 ~~~~~gv~--~~~IG~vt~~~~~~~i~I~~~g~~v~~~~~~~L~~~W~~ts~~~~~l~~np~~~~~e~~~~~~~~~p~~~ 521 (749)
+++++|++ +++||+|++ + +.++|.++|+.+++.++++|+++|++|||+||++|+||.|+++|++.+.+..+|+++
T Consensus 950 ~l~~~gi~~~a~~IG~V~~-~--~~l~i~~~g~~~~~~~~~~l~~~w~~ts~~~~~~~~~~~~~~~e~~~~~~~~~p~~~ 1026 (1303)
T 3ugj_A 950 LLAQYGLADCVHYLGQALA-G--DRFVITANDQTVFSESRTTLRVWWAETTWQMQRLRDNPQCADQEHEAKANDTDPGLN 1026 (1303)
T ss_dssp HHHHTTCGGGEEEEEEEES-S--SEEEEEETTEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHTTCTTCCCSC
T ss_pred HHHhCCCCCceEEEEEEcC-C--CcEEEEECCEEEEEccHHHHHHHHHHHHHHhhccccCchhhHHhhhhhccccCCCcc
Confidence 99999998 799999998 6 789999999999999999999999999999999999999999999998776666542
Q ss_pred ----cCC--------------Ccc-------------------------------ccc--cccC---C---------Ccc
Q psy2354 522 ----YQP--------------VRD-------------------------------DIV--GATL---G---------KKD 538 (749)
Q Consensus 522 ----f~p--------------PkV-------------------------------Dl~--~~sL---d---------ygD 538 (749)
|++ ||| |+. +.+| | |||
T Consensus 1027 ~~~~~~~~~~~~~~~~~~~~~pkVaIi~~~G~N~~~~~~~A~~~aG~~~~~v~~~dl~~~~~~l~~~d~lvlPGGfSygD 1106 (1303)
T 3ugj_A 1027 VKLSFDINEDIAAPYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLGGRIGLGNFHALVACGGFSYGD 1106 (1303)
T ss_dssp CBCSSCTTCCTTHHHHTTTCCCEEEEEECTTCCCHHHHHHHHHHTTCEEEEEEHHHHHTTSCCGGGCSEEEECCSCGGGG
T ss_pred ccccccccccccccccccCCCCEEEEEecCCcCCHHHHHHHHHHhCCceEEEeecccccCcccHhhCCEEEECCCCcchh
Confidence 332 455 111 1223 2 999
Q ss_pred cccchHHHHHhhccChhHHHHHHHHHhCCCCeeEeeechhhhhhcc-CccccCcCCcCcccccccccccCCCcceeeeEE
Q psy2354 539 ALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL-GWFSVSTQDKNNLVTDVMLSHNNSERFECRYST 617 (749)
Q Consensus 539 vlgsgkgwa~siL~n~~~~~~f~~f~~r~dtf~LGICnGcQ~L~~~-~lIp~~~g~~~~~~p~~~~~~N~s~rfEsr~~~ 617 (749)
+++++++|+.++++|+.++++|.+|+.++|+|+||||||||+|+.+ ||+| |. ++|| +|++|.|+||||||++
T Consensus 1107 ~l~~g~~~a~~~l~~~~l~~~l~~~~~~~g~pvLGICnG~QlL~e~~gllP---g~--~~~p--~l~~N~s~~f~~r~~~ 1179 (1303)
T 3ugj_A 1107 VLGAGEGWAKSILFNHRVRDEFETFFHRPQTLALGVCNGCQMMSNLRELIP---GS--ELWP--RFVRNHSDRFEARFSL 1179 (1303)
T ss_dssp TTSTTHHHHHHHHTSHHHHHHHHHHHHSSSCEEEEETHHHHHHHTTGGGST---TC--TTCC--EEECCTTSSCEEEEEE
T ss_pred hhccchhHHHHHHhchhHHHHHHHHHHhCCCcEEEECHHHHHHHHhcCcCC---CC--CCCC--eEecCCCCCeEEeCeE
Confidence 9999999999999999999999999999999999999999999988 9999 55 6899 9999999999999999
Q ss_pred EEecCCCcccccCCCCceeeEEeecccceeeEe
Q psy2354 618 VKIMKSPAIMLRNLENSVLGVWVAHGEVMLRGA 650 (749)
Q Consensus 618 V~I~~s~Sv~l~gm~Gsvlpi~vaHGeGr~~~~ 650 (749)
|+|++++|+|+++|+|+++||||+|||||+.+.
T Consensus 1180 ~~v~~~~s~~~~~~~g~~~~i~vaHgEG~~~~~ 1212 (1303)
T 3ugj_A 1180 VEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR 1212 (1303)
T ss_dssp EEECCCSCGGGTTCTTCEEEEEEEESSCEEECS
T ss_pred EEECCCCChhhhccCCCEEeeeeEeCCCCeeeC
Confidence 999999999999999999999999999998764
|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* | Back alignment and structure |
|---|
| >3ugj_A Phosphoribosylformylglycinamidine synthase; amidotransferase, glutaminase, thioester intermediate, ligas; HET: ADP; 1.78A {Salmonella enterica subsp} PDB: 1t3t_A* 3ujn_A* 3umm_A* | Back alignment and structure |
|---|
| >1vk3_A Phosphoribosylformylglycinamidine synthase II; TM1246, structural genomics, JCSG, PSI, protein structure initiative; 2.15A {Thermotoga maritima} SCOP: d.79.4.1 d.79.4.1 d.139.1.1 d.139.1.1 PDB: 3d54_A* 2hs3_A* 2hs0_A* 2hs4_A* 2hru_A* 2hry_A* | Back alignment and structure |
|---|
| >2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A | Back alignment and structure |
|---|
| >2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A | Back alignment and structure |
|---|
| >3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A* | Back alignment and structure |
|---|
| >3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli} | Back alignment and structure |
|---|
| >3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A | Back alignment and structure |
|---|
| >2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} | Back alignment and structure |
|---|
| >2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A* | Back alignment and structure |
|---|
| >3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A* | Back alignment and structure |
|---|
| >3vti_C Hydrogenase maturation factor; transferase, carbamoyltransfer, maturation of [NIFE]-hydroge nitrIle synthesis, iron; 2.56A {Thermoanaerobacter tengcongensis} | Back alignment and structure |
|---|
| >2rb9_A HYPE protein; hydrogenase maturation, dimer, enzyme, X- RAY crystallography, structural genomics, BSGI; 2.00A {Escherichia coli O157} PDB: 2i6r_A | Back alignment and structure |
|---|
| >2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis} | Back alignment and structure |
|---|
| >2z1u_A Hydrogenase expression/formation protein HYPE; alpha-beta fold, beta barrel, lyase; HET: ATP; 2.00A {Desulfovibrio vulgaris subsp} PDB: 2z1t_A* | Back alignment and structure |
|---|
| >2z1e_A Hydrogenase expression/formation protein HYPE; [NIFE] hydrogenase maturation, ATPase, transferase; 1.55A {Thermococcus kodakarensis} SCOP: d.79.4.1 d.139.1.1 PDB: 2z1f_A | Back alignment and structure |
|---|
| >2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
| >2btu_A Phosphoribosyl-aminoimidazole synthetase; synthase, PURM, de novo purine biosynthesis, AIR synthase family, spine, FGAR amidotransferase; 2.31A {Bacillus anthracis} | Back alignment and structure |
|---|
| >3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A | Back alignment and structure |
|---|
| >3fd5_A Selenide, water dikinase 1; selenophosphate synthetase, SELD, ATP-binding, nucleotide-binding, selenium, transferase; HET: AP2; 1.90A {Homo sapiens} PDB: 3fd6_A* | Back alignment and structure |
|---|
| >3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus} | Back alignment and structure |
|---|
| >2v9y_A Phosphoribosylformylglycinamidine cyclo-ligase; multifunctional enzyme, structural genomics consortium, nucleotide-binding, purine biosynthesis; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2z01_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha and beta proteins, cytoplasm, purine biosynthesis, structural genomics, NPPSFA; 2.20A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
| >2yxz_A Thiamin-monophosphate kinase; alpha/beta structure, transferase; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A | Back alignment and structure |
|---|
| >3u0o_A Selenide, water dikinase; ATP binding protein, selenophosphate synthesis, transferase; 2.25A {Escherichia coli} | Back alignment and structure |
|---|
| >2zod_A Selenide, water dikinase; FULL-length selenophosphate synthetase, transferase, ATP- binding, magnesium, nucleotide-binding, selenium; 1.98A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 2yye_A 2zau_A | Back alignment and structure |
|---|
| >3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima} | Back alignment and structure |
|---|
| >3m84_A Phosphoribosylformylglycinamidine cyclo-ligase; alpha-beta fold, csgid, ATP-binding, nucleotide-BIND purine biosynthesis; HET: MSE AMP TRS; 1.70A {Francisella tularensis subsp} PDB: 3qty_A* | Back alignment and structure |
|---|
| >3p4e_A Phosphoribosylformylglycinamidine cyclo-ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: AMP CIT; 1.77A {Vibrio cholerae} PDB: 1cli_A | Back alignment and structure |
|---|
| >1t4a_A PURS; tetramer, complex formyl glycinamide synthetase, FGAR, structural protein; 2.00A {Bacillus subtilis} SCOP: d.284.1.1 PDB: 1twj_A | Back alignment and structure |
|---|
| >1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1 | Back alignment and structure |
|---|
| >1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B* | Back alignment and structure |
|---|
| >2zw2_A Putative uncharacterized protein STS178; purine metabolism, ligase; 1.55A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
| >2yx5_A UPF0062 protein MJ1593; anti parallel beta sheet, NPPSFA, national project on protei structural and functional analyses; 2.30A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3c9u_A Thiamine monophosphate kinase; beta barrel, alpha-beta structure, transferase; HET: TPP ADP; 1.48A {Aquifex aeolicus} SCOP: d.79.4.1 d.139.1.1 PDB: 3c9r_A* 3c9t_A* 3c9s_A* 1vqv_A | Back alignment and structure |
|---|
| >2dgb_A Hypothetical protein PURS; purine, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Thermus thermophilus} PDB: 2cuw_A | Back alignment and structure |
|---|
| >3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >3kiz_A Phosphoribosylformylglycinamidine cyclo-ligase; STR genomics, joint center for structural genomics, JCSG; 1.50A {Cytophaga hutchinsonii atcc 33406} | Back alignment and structure |
|---|
| >4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae} | Back alignment and structure |
|---|
| >3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii} | Back alignment and structure |
|---|
| >2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G | Back alignment and structure |
|---|
| >3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua} | Back alignment and structure |
|---|
| >3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans} | Back alignment and structure |
|---|
| >2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} | Back alignment and structure |
|---|
| >3mdo_A Putative phosphoribosylformylglycinamidine cyclo-; structural genomics, joint center for structural genomics; HET: MSE PGE P6G PG4; 1.91A {Parabacteroides distasonis} | Back alignment and structure |
|---|
| >2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1 | Back alignment and structure |
|---|
| >2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 749 | ||||
| d1t3ta6 | 187 | d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-lik | 8e-29 | |
| d1t3ta5 | 200 | d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like | 1e-17 | |
| d1t3ta7 | 217 | d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-li | 4e-14 | |
| d1t3ta3 | 152 | d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like | 1e-13 | |
| d1t3ta2 | 262 | c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidot | 3e-13 | |
| d1vk3a2 | 162 | d.79.4.1 (A:346-507) Phosphoribosylformylglycinami | 0.003 |
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Score = 111 bits (279), Expect = 8e-29
Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 12/174 (6%)
Query: 224 VGVVTGSNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIESIHDQGAG 283
+G S+ G + ADLDF +VQR +PEM ++ VI C +L + NPI IHD GAG
Sbjct: 19 LGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQL-GDANPILFIHDVGAG 77
Query: 284 GNGNVLKEIVEP--VGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCKTLRMI 341
G N + E+V G L +P +S LE+W E QE L +
Sbjct: 78 GLSNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL 137
Query: 342 SAREKCPVQFVGVVTGSNKIVLAEDKAKYYSNPSSPLQHPVDIQMELICGKMPQ 395
RE+ P +G T + L ++ P+D+ ++++ GK P+
Sbjct: 138 CKRERAPYAVIGDATEEQHLSLHDNHFD---------NQPIDLPLDVLLGKTPK 182
|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 200 | Back information, alignment and structure |
|---|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} Length = 217 | Back information, alignment and structure |
|---|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} Length = 152 | Back information, alignment and structure |
|---|
| >d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} Length = 262 | Back information, alignment and structure |
|---|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} Length = 162 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 749 | |||
| d1t3ta6 | 187 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 100.0 | |
| d1vk3a3 | 179 | Phosphoribosylformylglycinamidine synthase II, dom | 99.96 | |
| d1t3ta3 | 152 | FGAM synthase PurL, PurS-like domain {Salmonella t | 99.96 | |
| d1t3ta7 | 217 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 99.93 | |
| d1t3ta5 | 200 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 99.93 | |
| d1t3ta2 | 262 | FGAM synthase PurL, amidotransferase domain {Salmo | 99.91 | |
| d1vk3a2 | 162 | Phosphoribosylformylglycinamidine synthase II, dom | 99.87 | |
| d1t3ta6 | 187 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 99.67 | |
| d1vk3a3 | 179 | Phosphoribosylformylglycinamidine synthase II, dom | 99.57 | |
| d2z1ea2 | 179 | Hydrogenase expression/formation protein HypE {The | 99.05 | |
| d1vk3a1 | 165 | Phosphoribosylformylglycinamidine synthase II, dom | 98.95 | |
| d2z1ea1 | 113 | Hydrogenase expression/formation protein HypE {The | 97.98 | |
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 97.19 | |
| d2z1ea2 | 179 | Hydrogenase expression/formation protein HypE {The | 97.11 | |
| d1t3ta7 | 217 | FGAM synthase PurL, PurM-like module, C1 and C2 do | 96.95 | |
| d3c9ua1 | 137 | Thiamine monophosphate kinase (ThiL) N-terminal do | 96.93 | |
| d2zoda2 | 182 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 96.81 | |
| d2zoda1 | 152 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 96.74 | |
| d1vq3a_ | 86 | PurS subunit of FGAM synthetase {Thermotoga mariti | 96.1 | |
| d1gtda_ | 82 | PurS subunit of FGAM synthetase {Archaeon Methanob | 95.28 | |
| d1t4aa_ | 80 | PurS subunit of FGAM synthetase {Bacillus subtilis | 94.7 | |
| d2abwa1 | 218 | Pyridoxine biosynthesis protein 2, Pdx2 {Malaria p | 93.05 | |
| d2zoda2 | 182 | Selenide, water dikinase SelD {Aquifex aeolicus [T | 91.68 | |
| d2nv0a1 | 195 | Hypothetical protein YaaE {Bacillus subtilis [TaxI | 91.05 | |
| d1q7ra_ | 202 | Hypothetical protein YaaE {Bacillus stearothermoph | 89.69 | |
| d1clia2 | 175 | Aminoimidazole ribonucleotide synthetase (PurM) C- | 88.36 | |
| d1k9vf_ | 200 | GAT subunit, HisH, (or domain) of imidazoleglycero | 88.26 | |
| d1t3ta1 | 68 | FGAM synthase PurL, linker domain {Salmonella typh | 87.73 | |
| d1t3ta4 | 209 | FGAM synthase PurL, PurM-like module, N1 and N2 do | 86.24 | |
| d3c9ua2 | 163 | Thiamine monophosphate kinase (ThiL) C-terminal do | 84.46 | |
| d1clia1 | 166 | Aminoimidazole ribonucleotide synthetase (PurM) N- | 84.19 | |
| d1jvna2 | 232 | GAT subunit, HisH, (or domain) of imidazoleglycero | 81.99 |
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: PurM C-terminal domain-like superfamily: PurM C-terminal domain-like family: PurM C-terminal domain-like domain: FGAM synthase PurL, PurM-like module, C1 and C2 domains species: Salmonella typhimurium [TaxId: 90371]
Probab=100.00 E-value=2.5e-53 Score=420.00 Aligned_cols=172 Identities=32% Similarity=0.534 Sum_probs=150.3
Q ss_pred EEeeCCccccccccc--cccccCCCCccCCCCccccCChHHHHHHHHHHHHHHhCCCCCCCEEEEcccCccccccccccc
Q psy2354 215 AREKCPVQFVGVVTG--SNKVQGDNAADLDFDAVQRGDPEMGQKLNRVIRACIELPNNLNPIESIHDQGAGGNGNVLKEI 292 (749)
Q Consensus 215 v~~Gg~~~r~G~gG~--Ss~~~~~~~~~~~~~aVQ~gnp~~e~~~q~vi~~~~~~~~~~~~i~~i~D~GaGG~~na~~El 292 (749)
|++|||||||||||| ||..+++++++.|++|||+|||||||+|++++++|++++ +.|+|.+|||+||||++||++||
T Consensus 8 i~vG~~tgrdGigGas~sS~~~~~~~~~~~~~aVQ~gdP~~ek~l~~~~~~~~e~~-~~~~i~~i~D~GAGGl~~a~~Em 86 (187)
T d1t3ta6 8 IVLGGPAMNIGLGGGAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLG-DANPILFIHDVGAGGLSNAMPEL 86 (187)
T ss_dssp EEEESCBCSCC-------------------CTTCCCCCHHHHHHHHHHHHHHHTTG-GGCCEEEEEECCTTTHHHHHHHH
T ss_pred EEECCCCCccCCCcHHHhhhhhccccccccccccccCCHHHHHHHHHHHHHHHHhc-CCCceeEeccCCCCccccccHHH
Confidence 799999999999999 888888888899999999999999999999999999999 99999999999999999999999
Q ss_pred ccC--CCceEEecccccCCCCcChhhhcccccccccccccCcccHHHHHHHHhhcCCCeEEEEEEeCCCCEEEEeccccc
Q psy2354 293 VEP--VGAVVFTESFLLGDPSISTLELWGAEYQENNALLCKPLHCKTLRMISAREKCPVQFVGVVTGSNKIVLAEDKAKY 370 (749)
Q Consensus 293 ~~~--~G~~i~l~~v~~~~~~ms~~eI~~sEsQEr~~l~v~~~~~~~~~~i~~re~~~~~vVG~~T~~~~l~~~~~~f~~ 370 (749)
+++ .|++|+|++||+++++|+|+|||||||||||+++|+|++++.|++||+||+||+++||++|+++++++.++.
T Consensus 87 a~~~g~G~~i~Ld~Vp~~~~~m~p~EI~~SESQERm~~~v~~~~~~~~~~i~~k~~~~~~vIG~vt~~~~~~v~~~~--- 163 (187)
T d1t3ta6 87 VSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDELCKRERAPYAVIGDATEEQHLSLHDNH--- 163 (187)
T ss_dssp HHHTTCEEEEEGGGSCBSCTTCCHHHHHHCCCSSEEEEEECGGGHHHHHHHHHHHTCCEEEEEEEESSCEEEEEETT---
T ss_pred HhcCCCeEEEEChhccccccccChHHHhhhCcccceEEEechhHHHHHHHHHHHhCCCeEEEEEEecCCeEEEEecc---
Confidence 996 799999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCCCCcccccchhhhhcCCCcc
Q psy2354 371 YSNPSSPLQHPVDIQMELICGKMPQK 396 (749)
Q Consensus 371 ~~~~~~~~~~~vdlp~~~l~~~~p~~ 396 (749)
.++.++|+|++.|++++|++
T Consensus 164 ------~ge~vvdlpl~~L~~~~P~y 183 (187)
T d1t3ta6 164 ------FDNQPIDLPLDVLLGKTPKM 183 (187)
T ss_dssp ------TTEEEEEEEHHHHTCCCCCC
T ss_pred ------CCCEEEEeEHHHHcCCCCCc
Confidence 68999999999999999974
|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1t3ta3 d.284.1.2 (A:1-152) FGAM synthase PurL, PurS-like domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta5 d.79.4.1 (A:617-816) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1t3ta2 c.23.16.1 (A:1034-1295) FGAM synthase PurL, amidotransferase domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1t3ta6 d.139.1.1 (A:430-616) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1vk3a3 d.139.1.1 (A:167-345) Phosphoribosylformylglycinamidine synthase II, domains 2 and 4 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d2z1ea1 d.79.4.1 (A:43-155) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
| >d1t3ta7 d.139.1.1 (A:817-1033) FGAM synthase PurL, PurM-like module, C1 and C2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d3c9ua1 d.79.4.1 (A:1-137) Thiamine monophosphate kinase (ThiL) N-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2zoda1 d.79.4.1 (A:3-154) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1vq3a_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1gtda_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
| >d1t4aa_ d.284.1.1 (A:) PurS subunit of FGAM synthetase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2abwa1 c.23.16.1 (A:2-219) Pyridoxine biosynthesis protein 2, Pdx2 {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2zoda2 d.139.1.1 (A:155-336) Selenide, water dikinase SelD {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d2nv0a1 c.23.16.1 (A:1-195) Hypothetical protein YaaE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1q7ra_ c.23.16.1 (A:) Hypothetical protein YaaE {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
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| >d1clia2 d.139.1.1 (A:171-345) Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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| >d1t3ta1 a.5.10.1 (A:153-220) FGAM synthase PurL, linker domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d1t3ta4 d.79.4.1 (A:221-429) FGAM synthase PurL, PurM-like module, N1 and N2 domains {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
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| >d3c9ua2 d.139.1.1 (A:138-300) Thiamine monophosphate kinase (ThiL) C-terminal domain {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
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| >d1clia1 d.79.4.1 (A:5-170) Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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