Psyllid ID: psy2440


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60
MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG
ccccEEEcEEccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccc
ccEEEEEEEcccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccc
MKIMRQVETVGQVYMavsgapeetphhacnisdlsLSFIETVENmkegsdnniqIRIDEG
MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVenmkegsdnniqirideg
MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG
*********VGQVYMAV*********HACNISDLSLSFIET*******************
*KIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDE*
MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG
MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRID**
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oooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
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MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query60 2.2.26 [Sep-21-2011]
Q9VEU6667 Soluble guanylate cyclase yes N/A 0.95 0.085 0.431 0.0002
Q8INF0 947 Soluble guanylate cyclase no N/A 0.866 0.054 0.339 0.0002
P40146 1248 Adenylate cyclase type 8 yes N/A 0.9 0.043 0.35 0.0002
P97490 1249 Adenylate cyclase type 8 yes N/A 0.9 0.043 0.35 0.0002
P40145 1251 Adenylate cyclase type 8 yes N/A 0.9 0.043 0.333 0.0002
Q9VEU5669 Soluble guanylate cyclase no N/A 0.683 0.061 0.512 0.0002
>sp|Q9VEU6|GCYDA_DROME Soluble guanylate cyclase 89Da OS=Drosophila melanogaster GN=Gyc-89Da PE=1 SV=2 Back     alignment and function desciption
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)

Query: 3   IMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG 60
            + +VETVG VYMAVSGAP+  P HA +  DL+L  ++  +    G D  I++ I+ G
Sbjct: 533 FVYKVETVGMVYMAVSGAPDVNPLHAEHACDLALRVMKKFKAHDMG-DVAIRVGINSG 589




Heterodimers with Gyc-89Da and Gyc-89Db are activated in response to changing oxygen concentrations, alerting flies to hypoxic environments. Under normal oxygen concentrations, oxygen binds to the heme group and results in low levels of guanylyl cyclase activity. When exposed to reduced oxygen concentrations, the oxygen dissociates from the heme group resulting in activation of the enzyme.
Drosophila melanogaster (taxid: 7227)
EC: 4EC: .EC: 6EC: .EC: 1EC: .EC: 2
>sp|Q8INF0|GCY8E_DROME Soluble guanylate cyclase 88E OS=Drosophila melanogaster GN=Gyc88E PE=1 SV=3 Back     alignment and function description
>sp|P40146|ADCY8_RAT Adenylate cyclase type 8 OS=Rattus norvegicus GN=Adcy8 PE=2 SV=1 Back     alignment and function description
>sp|P97490|ADCY8_MOUSE Adenylate cyclase type 8 OS=Mus musculus GN=Adcy8 PE=2 SV=2 Back     alignment and function description
>sp|P40145|ADCY8_HUMAN Adenylate cyclase type 8 OS=Homo sapiens GN=ADCY8 PE=1 SV=1 Back     alignment and function description
>sp|Q9VEU5|GCYDB_DROME Soluble guanylate cyclase 89Db OS=Drosophila melanogaster GN=Gyc-89Db PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query60
383858792 629 PREDICTED: soluble guanylate cyclase 89D 0.866 0.082 0.576 2e-08
193610618 661 PREDICTED: soluble guanylate cyclase 89D 0.866 0.078 0.557 8e-08
410913885 676 PREDICTED: soluble guanylate cyclase 88E 0.866 0.076 0.490 1e-07
47215560 173 unnamed protein product [Tetraodon nigro 0.866 0.300 0.490 1e-07
91077268 603 PREDICTED: similar to AGAP004564-PA [Tri 0.916 0.091 0.508 1e-07
340718320 631 PREDICTED: soluble guanylate cyclase 89D 0.866 0.082 0.557 1e-07
350401711 631 PREDICTED: soluble guanylate cyclase 89D 0.866 0.082 0.557 1e-07
270001677 1243 hypothetical protein TcasGA2_TC000544 [T 0.916 0.044 0.508 2e-07
380027870 632 PREDICTED: soluble guanylate cyclase 89D 0.866 0.082 0.538 2e-07
328777185 633 PREDICTED: soluble guanylate cyclase 89D 0.866 0.082 0.538 3e-07
>gi|383858792|ref|XP_003704883.1| PREDICTED: soluble guanylate cyclase 89Da-like [Megachile rotundata] Back     alignment and taxonomy information
 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 30/52 (57%), Positives = 39/52 (75%)

Query: 6   QVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRI 57
           +VETVG+VYMA SGAP+ T HHA NI+D SL  ++ V ++K  S  +IQIRI
Sbjct: 476 KVETVGRVYMAASGAPDRTEHHAQNIADFSLQLLKHVRSLKLPSGLDIQIRI 527




Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193610618|ref|XP_001943213.1| PREDICTED: soluble guanylate cyclase 89Db-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|410913885|ref|XP_003970419.1| PREDICTED: soluble guanylate cyclase 88E-like [Takifugu rubripes] Back     alignment and taxonomy information
>gi|47215560|emb|CAG06290.1| unnamed protein product [Tetraodon nigroviridis] Back     alignment and taxonomy information
>gi|91077268|ref|XP_974166.1| PREDICTED: similar to AGAP004564-PA [Tribolium castaneum] Back     alignment and taxonomy information
>gi|340718320|ref|XP_003397617.1| PREDICTED: soluble guanylate cyclase 89Da-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350401711|ref|XP_003486236.1| PREDICTED: soluble guanylate cyclase 89Da-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|270001677|gb|EEZ98124.1| hypothetical protein TcasGA2_TC000544 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|380027870|ref|XP_003697638.1| PREDICTED: soluble guanylate cyclase 89Da-like [Apis florea] Back     alignment and taxonomy information
>gi|328777185|ref|XP_396719.4| PREDICTED: soluble guanylate cyclase 89Da-like [Apis mellifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query60
FB|FBgn0038295 947 Gyc88E "Guanylyl cyclase at 88 0.866 0.054 0.339 6.4e-05
FB|FBgn0038435667 Gyc-89Da "Guanylyl cyclase at 0.9 0.080 0.454 0.00014
ZFIN|ZDB-GENE-090313-160608 gucy1b3 "guanylate cyclase 1, 0.85 0.083 0.461 0.00016
FB|FBgn0013973 787 Gycbeta100B "Guanylyl cyclase 0.85 0.064 0.442 0.00017
UNIPROTKB|F1RW97458 GUCY1B3 "Uncharacterized prote 0.916 0.120 0.428 0.0003
FB|FBgn0038436669 Gyc-89Db "Guanylyl cyclase at 0.633 0.056 0.552 0.0003
UNIPROTKB|E7EVL1 1120 ADCY8 "Adenylate cyclase type 0.9 0.048 0.35 0.00034
RGD|2036 1248 Adcy8 "adenylate cyclase 8 (br 0.9 0.043 0.35 0.00038
UNIPROTKB|J9P7R1551 GUCY1B3 "Guanylate cyclase sol 0.916 0.099 0.428 0.00038
UNIPROTKB|B7Z685551 GUCY1B3 "Guanylate cyclase sol 0.916 0.099 0.428 0.00038
FB|FBgn0038295 Gyc88E "Guanylyl cyclase at 88E" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 18/53 (33%), Positives = 37/53 (69%)

Query:     6 QVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDN-NIQIRI 57
             +VET+G  YM V+GAP++  +HA  + D++L  ++ + ++K+ S   +++IR+
Sbjct:   464 KVETIGDAYMVVAGAPDKDANHAERVCDMALDMVDAITDLKDPSTGQHLRIRV 516




GO:0004383 "guanylate cyclase activity" evidence=ISS;IDA;NAS
GO:0008074 "guanylate cyclase complex, soluble" evidence=ISS;IDA
GO:0035556 "intracellular signal transduction" evidence=IEA
GO:0006182 "cGMP biosynthetic process" evidence=IC;IDA
GO:0000302 "response to reactive oxygen species" evidence=IDA
GO:0046982 "protein heterodimerization activity" evidence=IPI
GO:0006184 "GTP catabolic process" evidence=IDA
GO:0020037 "heme binding" evidence=IDA
GO:0070025 "carbon monoxide binding" evidence=IDA
GO:0070026 "nitric oxide binding" evidence=IDA
GO:0019825 "oxygen binding" evidence=IDA
GO:0042803 "protein homodimerization activity" evidence=IPI
GO:0019826 "oxygen sensor activity" evidence=IDA
GO:0001666 "response to hypoxia" evidence=IMP
FB|FBgn0038435 Gyc-89Da "Guanylyl cyclase at 89Da" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-090313-160 gucy1b3 "guanylate cyclase 1, soluble, beta 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
FB|FBgn0013973 Gycbeta100B "Guanylyl cyclase beta-subunit at 100B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|F1RW97 GUCY1B3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
FB|FBgn0038436 Gyc-89Db "Guanylyl cyclase at 89Db" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E7EVL1 ADCY8 "Adenylate cyclase type 8" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|2036 Adcy8 "adenylate cyclase 8 (brain)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P7R1 GUCY1B3 "Guanylate cyclase soluble subunit beta-1" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|B7Z685 GUCY1B3 "Guanylate cyclase soluble subunit beta-1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query60
pfam00211184 pfam00211, Guanylate_cyc, Adenylate and Guanylate 4e-12
smart00044194 smart00044, CYCc, Adenylyl- / guanylyl cyclase, ca 3e-07
cd07302177 cd07302, CHD, cyclase homology domain 2e-05
>gnl|CDD|201086 pfam00211, Guanylate_cyc, Adenylate and Guanylate cyclase catalytic domain Back     alignment and domain information
 Score = 56.9 bits (138), Expect = 4e-12
 Identities = 17/53 (32%), Positives = 35/53 (66%)

Query: 5   RQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRI 57
            +V+T+G  YMA SG PE +P HA  +++++L  +E ++++   S   +++R+
Sbjct: 52  YKVKTIGDAYMAASGLPEPSPAHAQTLAEMALDMLEAIKSVNIHSFEGLRVRV 104


Length = 184

>gnl|CDD|214485 smart00044, CYCc, Adenylyl- / guanylyl cyclase, catalytic domain Back     alignment and domain information
>gnl|CDD|143636 cd07302, CHD, cyclase homology domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 60
KOG4171|consensus 671 99.86
KOG1023|consensus484 99.63
KOG3618|consensus 1318 99.54
KOG3619|consensus 867 99.49
PF00211184 Guanylate_cyc: Adenylate and Guanylate cyclase cat 99.41
KOG3619|consensus 867 99.31
cd07302177 CHD cyclase homology domain. Catalytic domains of 99.23
smart00044194 CYCc Adenylyl- / guanylyl cyclase, catalytic domai 99.18
COG2114227 CyaA Adenylate cyclase, family 3 (some proteins co 99.02
KOG3618|consensus 1318 98.97
cd07556133 Nucleotidyl_cyc_III Class III nucleotidyl cyclases 92.06
>KOG4171|consensus Back     alignment and domain information
Probab=99.86  E-value=6.8e-22  Score=133.39  Aligned_cols=60  Identities=37%  Similarity=0.548  Sum_probs=57.6

Q ss_pred             CCCceEEeeeCcEEEEEeCCCCCCchhHHHHHHHHHHHHHHHHHhhcCC-CCceEEEEecC
Q psy2440           1 MKIMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGS-DNNIQIRIDEG   60 (60)
Q Consensus         1 ~~~v~KvktiGD~ym~~~Glp~~~~~ha~~~~~~al~m~~~~~~~~~~~-~~~~~iRIGi~   60 (60)
                      +++|||||||||+||+++|+|.++++||+.++++||+|+...+++-.+. +.+++|||||+
T Consensus       482 ~~~VYKVETIGDaYm~vsG~P~~~~~HAe~i~~~AL~Mm~~ak~v~~p~~~~pi~iRiGIH  542 (671)
T KOG4171|consen  482 THDVYKVETIGDAYMVVSGLPDASDYHAEHIADLALGMMEEAKEVVSPVTGEPIQIRIGIH  542 (671)
T ss_pred             ccCeEEEeeccchheeecCCCCCChhHHHHHHHHHHHHHHHhhhhcCcCCCCceEEEEEec
Confidence            4799999999999999999999999999999999999999999999987 79999999996



>KOG1023|consensus Back     alignment and domain information
>KOG3618|consensus Back     alignment and domain information
>KOG3619|consensus Back     alignment and domain information
>PF00211 Guanylate_cyc: Adenylate and Guanylate cyclase catalytic domain; InterPro: IPR001054 Guanylate cyclases (4 Back     alignment and domain information
>KOG3619|consensus Back     alignment and domain information
>cd07302 CHD cyclase homology domain Back     alignment and domain information
>smart00044 CYCc Adenylyl- / guanylyl cyclase, catalytic domain Back     alignment and domain information
>COG2114 CyaA Adenylate cyclase, family 3 (some proteins contain HAMP domain) [Signal transduction mechanisms] Back     alignment and domain information
>KOG3618|consensus Back     alignment and domain information
>cd07556 Nucleotidyl_cyc_III Class III nucleotidyl cyclases Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query60
2wz1_A219 Structure Of The Catalytic Domain Of Human Soluble 3e-04
>pdb|2WZ1|A Chain A, Structure Of The Catalytic Domain Of Human Soluble Guanylate Cyclase 1 Beta 3. Length = 219 Back     alignment and structure

Iteration: 1

Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 3 IMRQVETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMK-EGSDNNIQIRIDEG 60 + +VETVG YM VSG PE HHA +I L+L +E ++ +G I I I G Sbjct: 61 FVYKVETVGDKYMTVSGLPEPCIHHARSICHLALDMMEIAGQVQVDGESVQITIGIHTG 119

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query60
1yk9_A204 Adenylate cyclase; beta-alpha-beta sandwich, struc 4e-14
3et6_A190 Soluble guanylyl cyclase beta; guanylate cyclase, 6e-14
3uvj_A 225 Guanylate cyclase soluble subunit alpha-3; nitric 1e-13
2wz1_A 219 Guanylate cyclase soluble subunit beta-1; lyase, G 2e-12
1azs_A220 VC1; complex (lyase/hydrolase), hydrolase, signal 9e-12
1ab8_A220 Adenylyl cyclase; lyase, complex (transferase-inhi 3e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Length = 204 Back     alignment and structure
 Score = 61.9 bits (151), Expect = 4e-14
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 7   VETVGQVYMAVSGAPEETPHHACNISDLSLSFIETVENMKEGSDNNIQIRI 57
           +E  G  YM VSG P   P H   ++D +L        +K+   N + +R+
Sbjct: 56  IEVSGDSYMVVSGVPRPRPDHTQALADFALDMTNVAAQLKDPRGNPVPLRV 106


>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Length = 190 Back     alignment and structure
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Length = 225 Back     alignment and structure
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Length = 219 Back     alignment and structure
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Length = 220 Back     alignment and structure
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Length = 220 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query60
1ab8_A220 Adenylyl cyclase; lyase, complex (transferase-inhi 99.71
3uvj_A 225 Guanylate cyclase soluble subunit alpha-3; nitric 99.68
3et6_A190 Soluble guanylyl cyclase beta; guanylate cyclase, 99.67
1azs_A220 VC1; complex (lyase/hydrolase), hydrolase, signal 99.65
2wz1_A 219 Guanylate cyclase soluble subunit beta-1; lyase, G 99.64
1yk9_A204 Adenylate cyclase; beta-alpha-beta sandwich, struc 99.63
2w01_A208 Adenylate cyclase; guanylyl cyclase, class III nuc 99.56
3r5g_A198 CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas 99.48
1wc3_A219 Adenylate cyclase; soluble adenylyl cyclase, CAMP 99.45
1y10_A 407 Hypothetical protein RV1264/MT1302; adenylyl cycla 99.34
3mr7_A189 Adenylate/guanylate cyclase/hydrolase, alpha/beta 99.29
1fx2_A 235 Receptor-type adenylate cyclase gresag 4.1; CAMP, 99.18
1ybt_A184 Hydrolase, alpha/beta hydrolase fold family; cycla 99.13
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B* Back     alignment and structure
Probab=99.71  E-value=2.4e-17  Score=98.38  Aligned_cols=59  Identities=17%  Similarity=0.408  Sum_probs=53.4

Q ss_pred             CCceEEeeeCcEEEEEeCCCC-----------CCchhHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecC
Q psy2440           2 KIMRQVETVGQVYMAVSGAPE-----------ETPHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG   60 (60)
Q Consensus         2 ~~v~KvktiGD~ym~~~Glp~-----------~~~~ha~~~~~~al~m~~~~~~~~~~~~~~~~iRIGi~   60 (60)
                      .+++|+||+||+|||+||+|.           ...+|+.+++++|++|++.+++++.....++++||||+
T Consensus        62 ~g~~~ik~iGD~~ma~fg~p~~~~~~~~~~~~~~~~~a~~a~~~Al~~~~~l~~~~~~~~~~l~~rIGIh  131 (220)
T 1ab8_A           62 SGVEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGIN  131 (220)
T ss_dssp             TTEEEEEEETTEEEEEECCCCSCCC--------CCHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCEEEEE
T ss_pred             CCeEEEEEeCceEEEEECCCccccccccccccccHHHHHHHHHHHHHHHHHHHHHhhccCCceEEEEEEE
Confidence            479999999999999999997           35689999999999999999999987778999999985



>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens} Back     alignment and structure
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B Back     alignment and structure
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A* Back     alignment and structure
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B Back     alignment and structure
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis} Back     alignment and structure
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP} Back     alignment and structure
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0 Back     alignment and structure
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A* Back     alignment and structure
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A* Back     alignment and structure
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi} Back     alignment and structure
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A Back     alignment and structure
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query60
d1azsb_199 Adenylyl cyclase IIC1, domain C2a {Rat (Rattus nor 99.57
d1azsa_190 Adenylyl cyclase VC1, domain C1a {Dog (Canis famil 99.52
d1wc1a_197 Adenylate cyclase CyaC {Spirulina platensis [TaxId 98.85
d1fx2a_ 235 Receptor-type monomeric adenylyl cyclase {Trypanos 98.56
>d1azsb_ d.58.29.1 (B:) Adenylyl cyclase IIC1, domain C2a {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleotide cyclase
family: Adenylyl and guanylyl cyclase catalytic domain
domain: Adenylyl cyclase IIC1, domain C2a
species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.57  E-value=1.5e-15  Score=88.22  Aligned_cols=59  Identities=17%  Similarity=0.392  Sum_probs=51.8

Q ss_pred             CCceEEeeeCcEEEEEeCCCCCC-----------chhHHHHHHHHHHHHHHHHHhhcCCCCceEEEEecC
Q psy2440           2 KIMRQVETVGQVYMAVSGAPEET-----------PHHACNISDLSLSFIETVENMKEGSDNNIQIRIDEG   60 (60)
Q Consensus         2 ~~v~KvktiGD~ym~~~Glp~~~-----------~~ha~~~~~~al~m~~~~~~~~~~~~~~~~iRIGi~   60 (60)
                      ++++|+||+||+|||+||+|..+           ..|+.+++++|++|++.+++++.....++++||||+
T Consensus        54 ~g~~~~k~iGD~~~a~~g~~~~~~~~~a~~~~~~~~~~~~av~~a~~~~~~~~~~~~~~~~~l~~rIGIh  123 (199)
T d1azsb_          54 SGVEKIKTIGSTYMAATGLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKLDAINKHSFNDFKLRVGIN  123 (199)
T ss_dssp             TTEEEEEEETTEEEEEESSSCC----------CTTHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEE
T ss_pred             cCcEEEEEecCeEEEEecCCCCcccccccchHHHHHhHHHHHHHHHHHHHHhhhccccCCCCeeEEeeee
Confidence            57899999999999999997642           247889999999999999999988888999999985



>d1azsa_ d.58.29.1 (A:) Adenylyl cyclase VC1, domain C1a {Dog (Canis familiaris) [TaxId: 9615]} Back     information, alignment and structure
>d1wc1a_ d.58.29.1 (A:) Adenylate cyclase CyaC {Spirulina platensis [TaxId: 118562]} Back     information, alignment and structure
>d1fx2a_ d.58.29.1 (A:) Receptor-type monomeric adenylyl cyclase {Trypanosome (Trypanosoma brucei), different isoform [TaxId: 5691]} Back     information, alignment and structure