Psyllid ID: psy2457

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MTKKFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccEEEEcccccEEEcccccEEccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEccccEEEEccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEcccccccccccccccccccccccccEEEccc
Coil and Loop (DISEMBL)
mtkkfpprpgfepspsrlvasprdylgirlsdsqcgvnsecnvrnhipvcscppgytgdpltqcrrfdphdlcepnpcgenakcqpgydksgkdrpvctclpgyvgdaltycrrgecqsdaecnydqvcnnyncekactsqcginaqctarnhvatcscpagyqgdalsrcypaettsyrrgrvyynkk
Flexible Loop (DISEMBL)
mtkkfpprpgfepspsrlvASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGyqgdalsrcypaettsyrrgrvyynkk
Low Complexity Region (SEG)
MTKKFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK
Disordered region (IsUnstruct)
***********************DYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE*******************DRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYY***
Disordered Region (DISOPRED)
*T*KFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYR*********
Disordered Region (DISEMBL)
***************SRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK
Disordered Region (DISPRO)
***************SRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYY***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTKKFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q9ESC1	738	EGF, latrophilin and seve	yes	N/A	0.592	0.151	0.301	6e-06
Q923X1	739	EGF, latrophilin seven tr	yes	N/A	0.608	0.155	0.284	1e-05
Q62059	3357	Versican core protein OS=	no	N/A	0.312	0.017	0.384	2e-05
P13611	3396	Versican core protein OS=	yes	N/A	0.312	0.017	0.384	2e-05
Q9ERB4	2738	Versican core protein (Fr	no	N/A	0.312	0.021	0.384	9e-05
Q90953	3562	Versican core protein OS=	no	N/A	0.386	0.020	0.336	0.0001
P81282	3381	Versican core protein OS=	yes	N/A	0.312	0.017	0.371	0.0002
Q9HBW9	690	EGF, latrophilin and seve	no	N/A	0.523	0.143	0.277	0.0003
P46530	2437	Neurogenic locus notch ho	no	N/A	0.645	0.050	0.3	0.0008

>sp|Q9ESC1|ELTD1_RAT EGF, latrophilin and seven transmembrane domain-containing protein 1 OS=Rattus norvegicus GN=Eltd1 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 24/136 (17%)

Query: 33  SQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSG 92
           + C  N++C V + +  C C  GYTG+ +T C   D  +  E + CG++A C+   + +G
Sbjct: 24  TPCLPNAKCEVLDEVAACFCSTGYTGNGITICEDVD--ECNETSVCGDHAVCE---NTNG 78

Query: 93  KDRPVCTCLPGYVGDA----LTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQC 148
                C C+ GY         T      CQ   ECN              TS CG +A C
Sbjct: 79  GFS--CFCVEGYQTSTGKTQFTPNDGSYCQDVDECNE-------------TSVCGDHAVC 123

Query: 149 TARNHVATCSCPAGYQ 164
              N   +C C  GYQ
Sbjct: 124 ENTNGGFSCFCVEGYQ 139

Could be involved in cardiac development.
Rattus norvegicus (taxid: 10116)

>sp|Q923X1|ELTD1_MOUSE EGF, latrophilin seven transmembrane domain-containing protein 1 OS=Mus musculus GN=Eltd1 PE=2 SV=3

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 60/137 (43%), Gaps = 22/137 (16%)

Query: 31  SDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQP---G 87
           S + C  N++C V N +  C C  GY+G+ +T C   D  +  E + CG++A C+    G
Sbjct: 23  SKTTCLPNAKCEVHNGVEACFCSQGYSGNGVTICEDID--ECSESSVCGDHAVCENVNGG 80

Query: 88  YDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQ 147
           +         C C  GY        +    +S    N    C + + E + +S CG +A 
Sbjct: 81  FS--------CFCREGY--------QTATGKSQFTPNDGSYCQDID-ECSESSVCGDHAV 123

Query: 148 CTARNHVATCSCPAGYQ 164
           C   N   +C C  GYQ
Sbjct: 124 CENVNGGFSCFCREGYQ 140

Could be involved in cardiac development.

Mus musculus (taxid: 10090)

>sp|Q62059|CSPG2_MOUSE Versican core protein OS=Mus musculus GN=Vcan PE=1 SV=2

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 36/78 (46%), Gaps = 19/78 (24%)

Query: 49   VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108
            VC+C PGY+GD   QC      D C  NPC   A C  G++        C CLP YVG  
Sbjct: 3074 VCTCAPGYSGD---QCEL--DFDECHSNPCRNGATCVDGFNTFR-----CLCLPSYVG-- 3121

Query: 109  LTYCRRGECQSDAE-CNY 125
                    C+ D E C+Y
Sbjct: 3122 ------ALCEQDTETCDY 3133

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Mus musculus (taxid: 10090)

>sp|P13611|CSPG2_HUMAN Versican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 36/78 (46%), Gaps = 19/78 (24%)

Query: 49   VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108
            VC+C PGY+GD   QC      D C  NPC   A C  G++        C CLP YVG  
Sbjct: 3112 VCTCVPGYSGD---QCEL--DFDECHSNPCRNGATCVDGFNTFR-----CLCLPSYVG-- 3159

Query: 109  LTYCRRGECQSDAE-CNY 125
                    C+ D E C+Y
Sbjct: 3160 ------ALCEQDTETCDY 3171

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Homo sapiens (taxid: 9606)

>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus norvegicus GN=Vcan PE=2 SV=2

 Score = 46.6 bits (109), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/78 (38%), Positives = 35/78 (44%), Gaps = 19/78 (24%)

Query: 49   VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108
            VC+C PGY+GD   QC      D C  NPC   A C  G +        C CLP YVG  
Sbjct: 2454 VCTCAPGYSGD---QCEL--DFDECHSNPCRNGATCVDGLNTFR-----CLCLPSYVG-- 2501

Query: 109  LTYCRRGECQSDAE-CNY 125
                    C+ D E C+Y
Sbjct: 2502 ------ALCEQDTETCDY 2513

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Rattus norvegicus (taxid: 10116)

>sp|Q90953|CSPG2_CHICK Versican core protein OS=Gallus gallus GN=VCAN PE=2 SV=1

 Score = 46.2 bits (108), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 19/92 (20%)

Query: 35   CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKD 94
            C     C  R    +C+C PG+ G+   QC      D C+ NPC   A C  G +     
Sbjct: 3263 CLNGGTCYPRGSFYICTCLPGFNGE---QCEL--DIDECQSNPCRNGATCIDGLNTF--- 3314

Query: 95   RPVCTCLPGYVGDALTYCRRGECQSDAE-CNY 125
               C CLP Y+G AL       C+ D E C+Y
Sbjct: 3315 --TCLCLPSYIG-AL-------CEQDTETCDY 3336

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Gallus gallus (taxid: 9031)

>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN PE=1 SV=2

 Score = 45.8 bits (107), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 19/78 (24%)

Query: 49   VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108
            VC+C PGY+GD   +C      D C  NPC   A C  G++        C CLP YVG  
Sbjct: 3097 VCTCVPGYSGD---RCEL--DFDECHSNPCRNGATCIDGFNTFR-----CLCLPSYVG-- 3144

Query: 109  LTYCRRGECQSDAE-CNY 125
                    C+ D E C+Y
Sbjct: 3145 ------ALCEQDTETCDY 3156

May play a role in intercellular signaling and in connecting cells with the extracellular matrix. May take part in the regulation of cell motility, growth and differentiation. Binds hyaluronic acid.

Bos taurus (taxid: 9913)

>sp|Q9HBW9|ELTD1_HUMAN EGF, latrophilin and seven transmembrane domain-containing protein 1 OS=Homo sapiens GN=ELTD1 PE=1 SV=3

 Score = 45.1 bits (105), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 20/119 (16%)

Query: 31  SDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYD 89
           + + C  N++C +RN I  C C  G++G+ +T C   D ++       CGENA C     
Sbjct: 23  TKTPCLPNAKCEIRNGIEACYCNMGFSGNGVTICE--DDNECGNLTQSCGENANC----- 75

Query: 90  KSGKDRPVCTCLPG---------YVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACT 139
            + +    C C+PG         ++ +  T C       +A C+ D VC   N  K  T
Sbjct: 76  TNTEGSYYCMCVPGFRSSSNQDRFITNDGTVCIE---NVNANCHLDNVCIAANINKTLT 131

Could be involved in cardiac development.

Homo sapiens (taxid: 9606)

>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a PE=2 SV=1

 Score = 43.5 bits (101), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 28/150 (18%)

Query: 34  QCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGK 93
           Q G N + N  +   +C+CPPGYTG    Q    D   L   NPC    +C      + K
Sbjct: 381 QKGSNCDTNPVSGKAICTCPPGYTGSACNQ--DIDECSL-GANPCEHGGRC-----LNTK 432

Query: 94  DRPVCTCLPGYVG----DALTYCRRGECQSDAECNYDQVCNNYNC--------------E 135
               C CL GY G      +  C+   CQ+DA C  DQ+   ++C               
Sbjct: 433 GSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATC-LDQI-GGFHCICMPGYEGVFCQINS 490

Query: 136 KACTSQCGINAQCTARNHVATCSCPAGYQG 165
             C SQ  +N +C  + +   C CP G+ G
Sbjct: 491 DDCASQPCLNGKCIDKINSFHCECPKGFSG 520

Implicated in cell fate specifications during embryo development. May be involved in the formation of the neural plate, notochord and brain vesicles.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
328700379	417	PREDICTED: neurogenic locus notch homolo	0.825	0.374	0.654	5e-53
242010907	387	conserved hypothetical protein [Pediculu	0.820	0.400	0.560	6e-42
347969091	414	AGAP003027-PA [Anopheles gambiae str. PE	0.814	0.371	0.563	2e-41
157136701	469	hypothetical protein AaeL_AAEL013612 [Ae	0.804	0.324	0.564	7e-41
332373608	509	unknown [Dendroctonus ponderosae]	0.793	0.294	0.539	3e-40
322801250	373	hypothetical protein SINV_03269 [Solenop	0.814	0.412	0.551	3e-40
91085479	475	PREDICTED: similar to CG9572 CG9572-PA i	0.708	0.282	0.546	4e-40
307211273	371	hypothetical protein EAI_00397 [Harpegna	0.814	0.415	0.551	6e-40
170058467	365	conserved hypothetical protein [Culex qu	0.751	0.389	0.56	6e-40
340729583	414	PREDICTED: hypothetical protein LOC10064	0.814	0.371	0.538	6e-40

>gi|328700379|ref|XP_001944803.2| PREDICTED: neurogenic locus notch homolog protein 1-like [Acyrthosiphon pisum]

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 104/159 (65%), Positives = 119/159 (74%), Gaps = 3/159 (1%)

Query: 31  SDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDK 90
           S S CGVN+ C  R   P+CSCP   TGDP  +CR F+P DLCEPNPCGENA+CQPG+D 
Sbjct: 260 SGSGCGVNANCEARGATPICSCPRTMTGDPFVRCRPFEPADLCEPNPCGENARCQPGHDV 319

Query: 91  SGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTA 150
           +GK+RPVCTCLPGY GDALT CRRGEC  D EC +DQ C NY C   CT QCG++A+C A
Sbjct: 320 TGKERPVCTCLPGYTGDALTRCRRGECSVDDECRHDQTCVNYQCRNVCTGQCGVDAECNA 379

Query: 151 RNHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK 189
           RN VATCSCP GY G A++RCYP  TTS   GRVYYN +
Sbjct: 380 RNRVATCSCPPGYTGHAMTRCYPKSTTS---GRVYYNNR 415

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242010907|ref|XP_002426199.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212510250|gb|EEB13461.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score =  175 bits (444), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 88/157 (56%), Positives = 109/157 (69%), Gaps = 2/157 (1%)

Query: 35  CGVNSECNVRN-HIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGK 93
           CG+N+ C VR+    VCSCP   TGDP  +CR F+  DLC+PNPCG NA+C PG+D++GK
Sbjct: 231 CGINANCKVRDGKTAVCSCPKDMTGDPFVRCRPFEKEDLCQPNPCGTNAQCTPGFDRTGK 290

Query: 94  DRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCN-NYNCEKACTSQCGINAQCTARN 152
           DRPVCTC  GY+GDAL  CRRGECQ+D +C++ QVC+ NY C   C +QCG+ A C  RN
Sbjct: 291 DRPVCTCPSGYIGDALVSCRRGECQTDGDCSHTQVCDSNYRCVNPCNNQCGVGADCQVRN 350

Query: 153 HVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK 189
           H+A CSCP    GDAL RC+P   T+ R     Y KK
Sbjct: 351 HIAVCSCPPNTSGDALVRCFPVTRTAPRARYDNYYKK 387

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|347969091|ref|XP_311849.4| AGAP003027-PA [Anopheles gambiae str. PEST] gi|333467703|gb|EAA07856.5| AGAP003027-PA [Anopheles gambiae str. PEST]

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 89/158 (56%), Positives = 104/158 (65%), Gaps = 4/158 (2%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           +  CGVN++CN+R   PVCSCP   TGDP   CR F   DLC PNPCG NA C PGYD+S
Sbjct: 256 EGACGVNADCNLRGLTPVCSCPRDMTGDPFISCRPFTKEDLCSPNPCGTNAVCTPGYDRS 315

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTAR 151
            ++RPVCTC PGY G+AL+ C RGECQSDAEC   + C  Y C   C+ QCG+ AQC A+
Sbjct: 316 NQERPVCTCPPGYTGNALSSCVRGECQSDAECADHKACIAYQCVDPCSGQCGVGAQCQAK 375

Query: 152 NHVATCSCPAGYQGDALSRCYPAETTSYRRGRVYYNKK 189
            H+A C+CPAG QGDAL  C  A      R    YNKK
Sbjct: 376 RHLAVCTCPAGTQGDALVSCRTARNYPVAR----YNKK 409

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157136701|ref|XP_001656882.1| hypothetical protein AaeL_AAEL013612 [Aedes aegypti] gi|108869890|gb|EAT34115.1| AAEL013612-PA [Aedes aegypti]

 Score =  172 bits (435), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 87/154 (56%), Positives = 103/154 (66%), Gaps = 2/154 (1%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGVN++CN+R   PVCSCP   TGDP   CR F   DLC PNPCG NA C PGYD++
Sbjct: 318 DGSCGVNADCNLRGLTPVCSCPRDMTGDPFVSCRPFTKEDLCIPNPCGTNAVCTPGYDRT 377

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTAR 151
            ++RPVCTC PGY G+AL+ C RGECQSD+EC+  + C NY C   C  QCG  AQC A+
Sbjct: 378 NRERPVCTCPPGYTGNALSNCVRGECQSDSECSDHKACINYQCVDPCRGQCGTGAQCQAK 437

Query: 152 NHVATCSCPAGYQGDALSRCYPAETTSYRRGRVY 185
            H+A C+CPAG  GDAL  C P  T SY   R +
Sbjct: 438 RHLAVCTCPAGTDGDALVSCRP--TKSYPVARYH 469

Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332373608|gb|AEE61945.1| unknown [Dendroctonus ponderosae]

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 82/152 (53%), Positives = 102/152 (67%), Gaps = 2/152 (1%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGV ++CN+R   P+CSCP   TGDP   CR FD HDLCEPNPCG NA C+PG++  
Sbjct: 339 DGVCGVGADCNLRGLTPICSCPKDMTGDPFVSCRPFDSHDLCEPNPCGSNAYCEPGFETR 398

Query: 92  --GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCT 149
              K+RPVC C  GY+G+ +  CRRGEC  D +C  +Q C +Y C+  C  QCG+NA+C 
Sbjct: 399 NPAKERPVCFCQTGYIGNPVAGCRRGECLGDPDCPNNQACIDYVCQNPCVGQCGVNAECN 458

Query: 150 ARNHVATCSCPAGYQGDALSRCYPAETTSYRR 181
            RNH+A C+CP GYQGDALS+CY     S  R
Sbjct: 459 PRNHLAVCTCPTGYQGDALSQCYLNRGQSASR 490

Source: Dendroctonus ponderosae

Species: Dendroctonus ponderosae

Genus: Dendroctonus

Family: Curculionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322801250|gb|EFZ21937.1| hypothetical protein SINV_03269 [Solenopsis invicta]

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 109/156 (69%), Gaps = 2/156 (1%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGVN++CN+R   PVCSCP   TG+P   CR F+P DLCEPNPCG NA C PG+D +
Sbjct: 214 DGVCGVNADCNLRGITPVCSCPKHMTGNPFVSCRLFEPRDLCEPNPCGVNAICTPGHDNT 273

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCTA 150
           GK+RPVCTC  GY+G+ALT C+RGEC +D+EC  ++ C ++ C   CT  +CG +A CT 
Sbjct: 274 GKERPVCTCPTGYIGNALTSCQRGECFTDSECPDNRACVDFTCINPCTGRECGPSATCTP 333

Query: 151 RNHVATCSCPAGYQGDALSRCYPAETTS-YRRGRVY 185
           R H+A C+CP G +GDAL  C P E+ S Y  GR Y
Sbjct: 334 RRHIAVCTCPQGTRGDALYTCNPIESKSVYNYGRAY 369

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91085479|ref|XP_975880.1| PREDICTED: similar to CG9572 CG9572-PA isoform 2 [Tribolium castaneum]

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 77/141 (54%), Positives = 98/141 (69%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGV + C +R   P+CSCP   TGDP   CR FD  DLCEPNPCG+NA+C+PG+D++
Sbjct: 329 DGVCGVGANCELRGLTPICSCPRDMTGDPFIHCRPFDKRDLCEPNPCGDNARCEPGHDRT 388

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTAR 151
           GK+RPVCTC PGYVGD L  CR GEC  D+ C   + C +Y C+  C  QCG+NA C  R
Sbjct: 389 GKERPVCTCHPGYVGDPLVSCRPGECTEDSHCPDSKACIDYKCQNPCVGQCGVNANCNPR 448

Query: 152 NHVATCSCPAGYQGDALSRCY 172
            H+A C+C  G+ GDAL++C+
Sbjct: 449 RHIAVCTCAEGFNGDALTQCH 469

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307211273|gb|EFN87459.1| hypothetical protein EAI_00397 [Harpegnathos saltator]

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 2/156 (1%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGVN++CN+R   PVCSCP   TG+P   CR F+P DLCEPNPCG NA C PG+D +
Sbjct: 212 DGVCGVNADCNLRGITPVCSCPRHMTGNPFVSCRLFEPRDLCEPNPCGSNAICTPGHDNT 271

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCTA 150
           GK+RPVCTC  GY+G+ALT C+RGEC +D+EC  ++ C ++ C   CT  +C  NA CT 
Sbjct: 272 GKERPVCTCPTGYIGNALTSCQRGECFTDSECPDNRACIDFTCRNPCTGRECSPNATCTP 331

Query: 151 RNHVATCSCPAGYQGDALSRCYPAETTS-YRRGRVY 185
           R H+A C+CP G +GDAL  C   E+TS Y  GR Y
Sbjct: 332 RRHIAVCTCPDGTRGDALYSCNSIESTSVYNYGRAY 367

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170058467|ref|XP_001864934.1| conserved hypothetical protein [Culex quinquefasciatus] gi|167877566|gb|EDS40949.1| conserved hypothetical protein [Culex quinquefasciatus]

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 99/150 (66%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGVN++CN+R   PVCSCP   TGDP   CR F   DLC PNPCG NA C PGYD++
Sbjct: 214 DGSCGVNADCNLRGLTPVCSCPRDMTGDPFVSCRPFTKEDLCNPNPCGTNAVCTPGYDRT 273

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTAR 151
            ++RPVCTC  GY G+AL+ C RGECQSD EC   + C NY C   C+ QCG  AQC A+
Sbjct: 274 NRERPVCTCPAGYTGNALSNCVRGECQSDNECADHKACINYQCVDPCSGQCGTGAQCQAK 333

Query: 152 NHVATCSCPAGYQGDALSRCYPAETTSYRR 181
            H+A C+CPAG QGDAL  C   +T    R
Sbjct: 334 RHLAVCTCPAGTQGDALVSCRATQTYPVAR 363

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340729583|ref|XP_003403079.1| PREDICTED: hypothetical protein LOC100648308 [Bombus terrestris]

 Score =  169 bits (427), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 84/156 (53%), Positives = 109/156 (69%), Gaps = 2/156 (1%)

Query: 32  DSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKS 91
           D  CGVN++CNVR   PVCSCP   TG+P   CR F+  DLCEPNPCG NA C PG+D +
Sbjct: 255 DGVCGVNADCNVRGITPVCSCPKHMTGNPFVSCRLFEARDLCEPNPCGTNAICTPGHDNT 314

Query: 92  GKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCTA 150
           GK+RP+CTC  GY+G+ALT C+RGEC +D EC  ++ C +Y+C+  CT  +CG +A CT 
Sbjct: 315 GKERPICTCPSGYIGNALTSCQRGECFTDGECPDNKACIDYSCQNPCTGKECGPSATCTP 374

Query: 151 RNHVATCSCPAGYQGDALSRCYPAETTS-YRRGRVY 185
           R H+A C+CP G +GDAL  C P ++ + Y  GR Y
Sbjct: 375 RRHIAVCTCPDGTRGDALFTCNPIDSRAVYNYGRAY 410

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
FB|FBgn0053196	22	dp "dumpy" [Drosophila melanog	0.677	5.818	0.426	6.6e-29
RGD|628822	1431	Stab2 "stabilin 2" [Rattus nor	0.767	0.101	0.304	2e-12
UNIPROTKB|I3LHN5	390	LOC100738148 "Uncharacterized	0.772	0.374	0.336	2.6e-11
UNIPROTKB|Q90Z43	792	SLIT3 "Slit3 protein" [Gallus	0.656	0.156	0.331	3.2e-11
UNIPROTKB|F1NL15	1094	SLIT3 "Uncharacterized protein	0.656	0.113	0.331	4.9e-11
UNIPROTKB|F1NF14	1338	SLIT3 "Uncharacterized protein	0.656	0.092	0.331	6.3e-11
UNIPROTKB|F5H0L2	1382	CRB1 "Protein crumbs homolog 1	0.746	0.102	0.342	6.6e-11
UNIPROTKB|P82279	1406	CRB1 "Protein crumbs homolog 1	0.746	0.100	0.342	6.7e-11
UNIPROTKB|F1S5G9	705	LOC100738148 "Uncharacterized	0.772	0.207	0.336	7.3e-11
MGI|MGI:2136343	1405	Crb1 "crumbs homolog 1 (Drosop	0.703	0.094	0.327	3.7e-10

FB|FBgn0053196 dp "dumpy" [Drosophila melanogaster (taxid:7227)]

 Score = 348 (127.6 bits), Expect = 6.6e-29, P = 6.6e-29
 Identities = 61/143 (42%), Positives = 81/143 (56%)

Query:    35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDP------HDLCEPNPCGENAKCQPGY 88
             CG+ ++C+V NH P+CSCP GY G+P  +C+R  P      HD C P+PCG NA C PG 
Sbjct: 17559 CGLQAQCSVINHTPICSCPSGYEGNPFVRCQRTPPTPTPPLHDACNPSPCGSNAICSPG- 17617

Query:    89 DKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQC 148
                G+    C+CLP + G+    CR  EC  + +C  D+ C    C   C   CGI A C
Sbjct: 17618 ---GQ----CSCLPDFDGNPYVGCRP-ECVLNTDCARDKACQRSKCTDPCPGACGIGAVC 17669

Query:   149 TARNHVATCSCPAGYQGDALSRC 171
               RNH+ TC+CP G  G+A  +C
Sbjct: 17670 EVRNHIPTCNCPPGTSGNAFVQC 17692

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0005578 "proteinaceous extracellular matrix" evidence=NAS

GO:0007424 "open tracheal system development" evidence=IMP

GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0008362 "chitin-based embryonic cuticle biosynthetic process" evidence=IMP

GO:0040005 "chitin-based cuticle attachment to epithelium" evidence=IMP

GO:0031012 "extracellular matrix" evidence=ISM

GO:0005201 "extracellular matrix structural constituent" evidence=ISM

GO:0046331 "lateral inhibition" evidence=IMP

RGD|628822 Stab2 "stabilin 2" [Rattus norvegicus (taxid:10116)]

 Score = 142 (55.0 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
 Identities = 56/184 (30%), Positives = 76/184 (41%)

Query:    18 LVASPRDYLGIRLSDSQ-C--GVNSECNVRN-----HIPV--CSCPPGYTGDPLTQC--R 65
             ++ +PR   G  + D Q C  G ++ CN R      + P+  C C  G+ G     C   
Sbjct:   809 VIQTPRCCHGYFMPDCQACPGGPDTPCNNRGMCRDLYTPMGQCLCHTGFNGTACELCWHG 868

Query:    66 RFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVG---DALT----YCRRGECQ 118
             RF P   C+P  C E+ +C  G   SG+    C C  G+     D  T     C    C 
Sbjct:   869 RFGPD--CQPRSCSEHGQCDEGITGSGE----CLCETGWTAASCDTPTAVFAVCTPA-CS 921

Query:   119 SDAEC--NYDQVCN-NYNCEK-ACT-----SQ----CGINAQCTARNHVATCSCPAGYQG 165
               A C  N   VCN NY  +   CT      Q    C   A+C+ +    +CSC  GY+G
Sbjct:   922 VHATCTENNTCVCNLNYEGDGITCTVVDFCKQNNGGCAKVAKCSQKGTQVSCSCKKGYKG 981

Query:   166 DALS 169
             D  S
Sbjct:   982 DGYS 985

GO:0005540 "hyaluronic acid binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006897 "endocytosis" evidence=IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0009897 "external side of plasma membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0051636 "Gram-negative bacterial cell surface binding" evidence=ISS

UNIPROTKB|I3LHN5 LOC100738148 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 162 (62.1 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 62/184 (33%), Positives = 76/184 (41%)

Query:    13 PSPSRLVAS-PRDYLGIRLSD--SQCGVNS-----ECNVRNHIPVCSCPPGYTGDPLTQC 64
             P   R + + P  Y G       S CG NS      C      PVC CP GY G     C
Sbjct:    66 PGERRFLCTCPPGYSGATCDTVVSFCGTNSCQHGGICGQDPVHPVCICPAGYAG---RFC 122

Query:    65 RRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVG---DA-LTYCRRGECQSD 120
                D HD C  +PC   A CQ G +  G     C C+PGY G   D  +  C    C+++
Sbjct:   123 E-LD-HDECGSSPCRNGAMCQDGIN--GYS---CFCVPGYQGRHCDLEVDECVSDPCKNE 175

Query:   121 AEC-----NYDQVC-NNY---NCE---KACTSQCGIN-AQCTARNHVATCSCPAGYQGDA 167
             A C      Y  +C +NY   NCE   + C SQ  +N A C        C C  G+ GD 
Sbjct:   176 ATCLNEIGRYTCLCPHNYSGVNCELEVEECWSQPCLNGATCRDAAGSYACDCAPGFLGD- 234

Query:   168 LSRC 171
               RC
Sbjct:   235 --RC 236

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q90Z43 SLIT3 "Slit3 protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 53/160 (33%), Positives = 68/160 (42%)

Query:    32 DSQCGVNSEC--NVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYD 89
             D+ C  NS C   + N+  VC CPP YTG+    C     H + E NPC   +KC P  D
Sbjct:   270 DNDCENNSTCVDGINNY--VCLCPPNYTGE---LCDEVINHCIPELNPCQHESKCVP-LD 323

Query:    90 KSGKDRPVCTCLPGYVG--------DALTY-CRRGECQSDAECNYDQVC-NNYN---CE- 135
             K  +    C CLPGY G        D + + CR G    DA   Y  VC   ++   CE 
Sbjct:   324 KGSR----CECLPGYSGKHCEIDDDDCVGHKCRHGAVCVDAVNGYTCVCPQGFSGLFCET 379

Query:   136 ---------KACTS-QCGINAQCTARNHVATCSCPAGYQG 165
                        C + +C   AQC   +    C C AG+ G
Sbjct:   380 PPPMVLLQTSPCDNYECQNGAQCIVAHQEPVCRCLAGFAG 419

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

GO:0032870 "cellular response to hormone stimulus" evidence=IEA

GO:0035385 "Roundabout signaling pathway" evidence=IEA

GO:0048495 "Roundabout binding" evidence=IEA

GO:0048846 "axon extension involved in axon guidance" evidence=IEA

GO:0050919 "negative chemotaxis" evidence=IEA

GO:0051414 "response to cortisol stimulus" evidence=IEA

GO:0061364 "apoptotic process involved in luteolysis" evidence=IEA

GO:0070100 "negative regulation of chemokine-mediated signaling pathway" evidence=IEA

GO:0048839 "inner ear development" evidence=IEP

GO:0007411 "axon guidance" evidence=IEP

GO:0060173 "limb development" evidence=IEP

UNIPROTKB|F1NL15 SLIT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 4.9e-11, P = 4.9e-11
 Identities = 53/160 (33%), Positives = 68/160 (42%)

Query:    32 DSQCGVNSEC--NVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYD 89
             D+ C  NS C   + N+  VC CPP YTG+    C     H + E NPC   +KC P  D
Sbjct:   572 DNDCENNSTCVDGINNY--VCLCPPNYTGE---LCDEVINHCIPELNPCQHESKCVP-LD 625

Query:    90 KSGKDRPVCTCLPGYVG--------DALTY-CRRGECQSDAECNYDQVC-NNYN---CE- 135
             K  +    C CLPGY G        D + + CR G    DA   Y  VC   ++   CE 
Sbjct:   626 KGSR----CECLPGYSGKHCEIDDDDCVGHKCRHGAVCVDAVNGYTCVCPQGFSGLFCET 681

Query:   136 ---------KACTS-QCGINAQCTARNHVATCSCPAGYQG 165
                        C + +C   AQC   +    C C AG+ G
Sbjct:   682 PPPMVLLQTSPCDNYECQNGAQCIVAHQEPVCRCLAGFAG 721

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

UNIPROTKB|F1NF14 SLIT3 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 166 (63.5 bits), Expect = 6.3e-11, P = 6.3e-11
 Identities = 53/160 (33%), Positives = 68/160 (42%)

Query:    32 DSQCGVNSEC--NVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYD 89
             D+ C  NS C   + N+  VC CPP YTG+    C     H + E NPC   +KC P  D
Sbjct:   816 DNDCENNSTCVDGINNY--VCLCPPNYTGE---LCDEVINHCIPELNPCQHESKCVP-LD 869

Query:    90 KSGKDRPVCTCLPGYVG--------DALTY-CRRGECQSDAECNYDQVC-NNYN---CE- 135
             K  +    C CLPGY G        D + + CR G    DA   Y  VC   ++   CE 
Sbjct:   870 KGSR----CECLPGYSGKHCEIDDDDCVGHKCRHGAVCVDAVNGYTCVCPQGFSGLFCET 925

Query:   136 ---------KACTS-QCGINAQCTARNHVATCSCPAGYQG 165
                        C + +C   AQC   +    C C AG+ G
Sbjct:   926 PPPMVLLQTSPCDNYECQNGAQCIVAHQEPVCRCLAGFAG 965

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0008285 "negative regulation of cell proliferation" evidence=IEA

GO:0009887 "organ morphogenesis" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IEA

GO:0030308 "negative regulation of cell growth" evidence=IEA

GO:0032870 "cellular response to hormone stimulus" evidence=IEA

GO:0035385 "Roundabout signaling pathway" evidence=IEA

GO:0048495 "Roundabout binding" evidence=IEA

GO:0048846 "axon extension involved in axon guidance" evidence=IEA

GO:0050919 "negative chemotaxis" evidence=IEA

GO:0051414 "response to cortisol stimulus" evidence=IEA

GO:0061364 "apoptotic process involved in luteolysis" evidence=IEA

GO:0070100 "negative regulation of chemokine-mediated signaling pathway" evidence=IEA

UNIPROTKB|F5H0L2 CRB1 "Protein crumbs homolog 1" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 6.6e-11, P = 6.6e-11
 Identities = 60/175 (34%), Positives = 72/175 (41%)

Query:    16 SRLVASPRDYLGI--RLSDSQCGVNS-----ECNVRNHIPVCSCPPGYTGDPLTQCRRFD 68
             S L   P  Y G     +   CG NS      C+     PVC CP GY G     C   D
Sbjct:    24 SFLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYPVCICPAGYAG---RFCE-ID 79

Query:    69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVG---DA-LTYCRRGECQSDAEC- 123
              HD C  +PC   A CQ G D  G     C C+PGY G   D  +  C    C+++A C 
Sbjct:    80 -HDECASSPCQNGAVCQDGID--GYS---CFCVPGYQGRHCDLEVDECASDPCKNEATCL 133

Query:   124 ----NYDQVC-NNY---NCE---KACTSQCGIN-AQCTARNHVATCSCPAGYQGD 166
                  Y  +C +NY   NCE     C SQ  +N A C        C C  G+ GD
Sbjct:   134 NEIGRYTCICPHNYSGVNCELEIDECWSQPCLNGATCQDALGAYFCDCAPGFLGD 188

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|P82279 CRB1 "Protein crumbs homolog 1" [Homo sapiens (taxid:9606)]

 Score = 166 (63.5 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 60/175 (34%), Positives = 72/175 (41%)

Query:    16 SRLVASPRDYLGI--RLSDSQCGVNS-----ECNVRNHIPVCSCPPGYTGDPLTQCRRFD 68
             S L   P  Y G     +   CG NS      C+     PVC CP GY G     C   D
Sbjct:    93 SFLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIYPVCICPAGYAG---RFCE-ID 148

Query:    69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVG---DA-LTYCRRGECQSDAEC- 123
              HD C  +PC   A CQ G D  G     C C+PGY G   D  +  C    C+++A C 
Sbjct:   149 -HDECASSPCQNGAVCQDGID--GYS---CFCVPGYQGRHCDLEVDECASDPCKNEATCL 202

Query:   124 ----NYDQVC-NNY---NCE---KACTSQCGIN-AQCTARNHVATCSCPAGYQGD 166
                  Y  +C +NY   NCE     C SQ  +N A C        C C  G+ GD
Sbjct:   203 NEIGRYTCICPHNYSGVNCELEIDECWSQPCLNGATCQDALGAYFCDCAPGFLGD 257

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0042462 "eye photoreceptor cell development" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0016324 "apical plasma membrane" evidence=IEA

GO:0007163 "establishment or maintenance of cell polarity" evidence=TAS

GO:0007267 "cell-cell signaling" evidence=TAS

UNIPROTKB|F1S5G9 LOC100738148 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 162 (62.1 bits), Expect = 7.3e-11, P = 7.3e-11
 Identities = 62/184 (33%), Positives = 76/184 (41%)

Query:    13 PSPSRLVAS-PRDYLGIRLSD--SQCGVNS-----ECNVRNHIPVCSCPPGYTGDPLTQC 64
             P   R + + P  Y G       S CG NS      C      PVC CP GY G     C
Sbjct:    89 PGERRFLCTCPPGYSGATCDTVVSFCGTNSCQHGGICGQDPVHPVCICPAGYAG---RFC 145

Query:    65 RRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVG---DA-LTYCRRGECQSD 120
                D HD C  +PC   A CQ G +  G     C C+PGY G   D  +  C    C+++
Sbjct:   146 E-LD-HDECGSSPCRNGAMCQDGIN--GYS---CFCVPGYQGRHCDLEVDECVSDPCKNE 198

Query:   121 AEC-----NYDQVC-NNY---NCE---KACTSQCGIN-AQCTARNHVATCSCPAGYQGDA 167
             A C      Y  +C +NY   NCE   + C SQ  +N A C        C C  G+ GD 
Sbjct:   199 ATCLNEIGRYTCLCPHNYSGVNCELEVEECWSQPCLNGATCRDAAGSYACDCAPGFLGD- 257

Query:   168 LSRC 171
               RC
Sbjct:   258 --RC 259

GO:0042462 "eye photoreceptor cell development" evidence=IEA

GO:0007009 "plasma membrane organization" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:2136343 Crb1 "crumbs homolog 1 (Drosophila)" [Mus musculus (taxid:10090)]

 Score = 159 (61.0 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 56/171 (32%), Positives = 70/171 (40%)

Query:    18 LVASPRDYLGIRL--SDSQCGVN-----SECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH 70
             L   P  Y G+    + + CG N       C      PVC CPPGY G     C     H
Sbjct:    94 LCQCPPGYSGLNCETATNSCGGNLCQHGGTCRKDPEHPVCICPPGYAG---RFCET--DH 148

Query:    71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYC--RRGECQSDAECNYDQV 128
             + C  +PC   A CQ G +  G     C C+PGY G    +C     EC SD  C  + V
Sbjct:   149 NECASSPCHNGAMCQDGIN--GYS---CFCVPGYQG---RHCDLEVDECVSDP-CKNEAV 199

Query:   129 CNN----YNCEKACTSQ-CGINAQ-----CTARN--HVATCS-CPAGYQGD 166
             C N    Y C   C  +  G+N +     C ++   H ATC   P GY  D
Sbjct:   200 CLNEIGRYTC--VCPQEFSGVNCELEIDECRSQPCLHGATCQDAPGGYSCD 248

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005886 "plasma membrane" evidence=IDA

GO:0005902 "microvillus" evidence=IDA

GO:0007009 "plasma membrane organization" evidence=IMP

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016044 "cellular membrane organization" evidence=IMP

GO:0042462 "eye photoreceptor cell development" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
KOG1219|consensus	4289		99.42
KOG1214|consensus	1289		99.36
KOG4289|consensus	2531		98.84
KOG4289|consensus	2531		98.77
KOG1219|consensus	4289		98.46
KOG1214|consensus	1289		98.11
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	97.99
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.95
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.73
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.72
KOG1217|consensus	487		97.6
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.57
KOG1225|consensus	525		97.42
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	97.16
KOG1225|consensus	525		97.13
KOG4260|consensus	350		97.12
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	97.1
KOG1217|consensus	487		97.07
cd00053	36	EGF Epidermal growth factor domain, found in epide	96.97
KOG4260|consensus	350		96.76
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.75
PF12662	24	cEGF: Complement Clr-like EGF-like	96.69
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	96.53
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	96.4
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.32
smart00181	35	EGF Epidermal growth factor-like domain.	96.23
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	95.92
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.49
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	95.2
smart00181	35	EGF Epidermal growth factor-like domain.	95.15
KOG1226|consensus	783		95.0
cd00053	36	EGF Epidermal growth factor domain, found in epide	94.85
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	94.74
PF12662	24	cEGF: Complement Clr-like EGF-like	94.69
KOG1226|consensus	783		92.24
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	89.89
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	89.27
PHA02887	126	EGF-like protein; Provisional	87.76
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	87.34
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	86.49
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	85.48
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	83.29
KOG0994|consensus	1758		83.1
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	81.74

>KOG1219|consensus

Probab=99.42  E-value=4.9e-13  Score=120.79  Aligned_cols=114  Identities=25%  Similarity=0.587  Sum_probs=96.7

Q ss_pred             Cccc-cccchhh-CCCCCEEeeCC-CCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeC
Q psy2457          24 DYLG-IRLSDSQ-CGVNSECNVRN-HIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTC  100 (189)
Q Consensus        24 ~c~~-~~~c~~~-C~~~~~C~~~~-~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c  100 (189)
                      .|.. .++|.+. |.++|.|...+ +.|.|.|++.|.|.   +|+  .+...|..+||..+++|..     ..+.+.|.|
T Consensus      3859 gC~l~~d~C~~npCqhgG~C~~~~~ggy~CkCpsqysG~---~CE--i~~epC~snPC~~GgtCip-----~~n~f~CnC 3928 (4289)
T KOG1219|consen 3859 GCSLLTDPCNDNPCQHGGTCISQPKGGYKCKCPSQYSGN---HCE--IDLEPCASNPCLTGGTCIP-----FYNGFLCNC 3928 (4289)
T ss_pred             cccccccccccCcccCCCEecCCCCCceEEeCcccccCc---ccc--cccccccCCCCCCCCEEEe-----cCCCeeEeC
Confidence            4543 3889888 99999999986 78999999999999   998  7899999999999999986     556799999


Q ss_pred             CCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         101 LPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       101 ~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      +.||.|..|+   .+   .               +++|+. .|.++|.|.+..|+|+|.|.+||.|..|
T Consensus      3929 ~~gyTG~~Ce---~~---G---------------i~eCs~n~C~~gg~C~n~~gsf~CncT~g~~gr~c 3976 (4289)
T KOG1219|consen 3929 PNGYTGKRCE---AR---G---------------ISECSKNVCGTGGQCINIPGSFHCNCTPGILGRTC 3976 (4289)
T ss_pred             CCCccCceee---cc---c---------------ccccccccccCCceeeccCCceEeccChhHhcccC
Confidence            9999998633   11   1               344544 6999999999999999999999999986

>KOG1214|consensus

Probab=99.36  E-value=2.2e-12  Score=108.41  Aligned_cols=131  Identities=30%  Similarity=0.666  Sum_probs=95.9

Q ss_pred             ccCCCCccccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccC---CCCCCCC--CCCCCC--CeeecC
Q psy2457          19 VASPRDYLGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFD---PHDLCEP--NPCGEN--AKCQPG   87 (189)
Q Consensus        19 ~~~~~~c~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~---~~~~c~~--~~c~~~--~~C~~~   87 (189)
                      ..++++|.|+++|+..   |.++.+|++.++++.|+|..+|.-.+. ..|..+.   .++.|..  +.|.-.  +.|+. 
T Consensus       725 ~gdgr~c~d~~eca~~~~~CGp~s~Cin~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~-  803 (1289)
T KOG1214|consen  725 QGDGRNCVDENECATGFHRCGPNSVCINLPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVH-  803 (1289)
T ss_pred             CCCCCCCCChhhhccCCCCCCCCceeecCCCceeEEEeecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEe-
Confidence            4678899999999876   999999999999999999999874322 2453211   1233432  334322  34543 


Q ss_pred             CCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457          88 YDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus        88 ~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                         -+.+.|.|.|.+||.|+..      .|.++++|..+              -|...+.|.+..+++.|.|.+||.|++
T Consensus       804 ---hGgs~y~C~CLPGfsGDG~------~c~dvDeC~ps--------------rChp~A~CyntpgsfsC~C~pGy~GDG  860 (1289)
T KOG1214|consen  804 ---HGGSTYSCACLPGFSGDGH------QCTDVDECSPS--------------RCHPAATCYNTPGSFSCRCQPGYYGDG  860 (1289)
T ss_pred             ---cCCceEEEeecCCccCCcc------ccccccccCcc--------------ccCCCceEecCCCcceeecccCccCCC
Confidence               1446799999999999873      46665555543              399999999999999999999999999


Q ss_pred             cccCeec
Q psy2457         168 LSRCYPA  174 (189)
Q Consensus       168 ~~~c~~~  174 (189)
                      .. |.+-
T Consensus       861 f~-CVP~  866 (1289)
T KOG1214|consen  861 FQ-CVPD  866 (1289)
T ss_pred             ce-ecCC
Confidence            76 6554

>KOG4289|consensus

Probab=98.84  E-value=5.1e-09  Score=92.72  Aligned_cols=98  Identities=30%  Similarity=0.725  Sum_probs=75.5

Q ss_pred             eeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCC
Q psy2457          42 NVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDA  121 (189)
Q Consensus        42 ~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~  121 (189)
                      ++..+.+.|.|++||++.   .|+  +.+++|-..||.+++.|..     ..+.|+|.|.+||.|+-++   .+  ....
T Consensus      1216 i~pvnglrCrCPpGFTgd---~Ce--TeiDlCYs~pC~nng~C~s-----rEggYtCeCrpg~tGehCE---vs--~~ag 1280 (2531)
T KOG4289|consen 1216 IHPVNGLRCRCPPGFTGD---YCE--TEIDLCYSGPCGNNGRCRS-----REGGYTCECRPGFTGEHCE---VS--ARAG 1280 (2531)
T ss_pred             ccccCceeEeCCCCCCcc---ccc--chhHhhhcCCCCCCCceEE-----ecCceeEEecCCcccccee---ee--cccC
Confidence            344577899999999999   998  8899999999999999987     6678999999999998633   11  0112


Q ss_pred             CCCCCCccCCCeecCCccccCCCCCEeeeCC-CCeeeeCCCC-CccCCc
Q psy2457         122 ECNYDQVCNNYNCEKACTSQCGINAQCTARN-HVATCSCPAG-YQGDAL  168 (189)
Q Consensus       122 ~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~-g~~~C~C~~G-~~g~~~  168 (189)
                      .|..+              .|.++++|++.. |++.|+|+.| |++..|
T Consensus      1281 rCvpG--------------vC~nggtC~~~~nggf~c~Cp~ge~e~prC 1315 (2531)
T KOG4289|consen 1281 RCVPG--------------VCKNGGTCVNLLNGGFCCHCPYGEFEDPRC 1315 (2531)
T ss_pred             ccccc--------------eecCCCEEeecCCCceeccCCCcccCCCce
Confidence            33322              488899998754 7999999988 225554

>KOG4289|consensus

Probab=98.77  E-value=3.6e-08  Score=87.55  Aligned_cols=84  Identities=30%  Similarity=0.583  Sum_probs=65.2

Q ss_pred             CCCCCCCccCCCCcccCCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCe
Q psy2457           5 FPPRPGFEPSPSRLVASPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAK   83 (189)
Q Consensus         5 ~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~   83 (189)
                      +.|-+||.+.        .+.++++.|... |.+++.|....|.|+|.|.+||+|.   +|+-......|.+.-|.++++
T Consensus      1224 CrCPpGFTgd--------~CeTeiDlCYs~pC~nng~C~srEggYtCeCrpg~tGe---hCEvs~~agrCvpGvC~nggt 1292 (2531)
T KOG4289|consen 1224 CRCPPGFTGD--------YCETEIDLCYSGPCGNNGRCRSREGGYTCECRPGFTGE---HCEVSARAGRCVPGVCKNGGT 1292 (2531)
T ss_pred             EeCCCCCCcc--------cccchhHhhhcCCCCCCCceEEecCceeEEecCCcccc---ceeeecccCccccceecCCCE
Confidence            4566777644        445689999888 9999999999999999999999999   996212234666777999999


Q ss_pred             eecCCCCCCCCCCeeeCCCC
Q psy2457          84 CQPGYDKSGKDRPVCTCLPG  103 (189)
Q Consensus        84 C~~~~~~~~~~~~~c~c~~g  103 (189)
                      |.+    ...+.+.|.|+.|
T Consensus      1293 C~~----~~nggf~c~Cp~g 1308 (2531)
T KOG4289|consen 1293 CVN----LLNGGFCCHCPYG 1308 (2531)
T ss_pred             Eee----cCCCceeccCCCc
Confidence            987    2445688888876

>KOG1219|consensus

Probab=98.46  E-value=3.4e-07  Score=84.63  Aligned_cols=89  Identities=25%  Similarity=0.558  Sum_probs=78.0

Q ss_pred             CCccCCCCcccCCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCC-CCCCCCCCCCCCCeeecC
Q psy2457          10 GFEPSPSRLVASPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDP-HDLCEPNPCGENAKCQPG   87 (189)
Q Consensus        10 gf~~~~~~~~~~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~-~~~c~~~~c~~~~~C~~~   87 (189)
                      ||...-..++.+..+..++.+|... |..+++|+...+.|.|.|+.||+|.   .|+  .. +++|..++|..++.|.+ 
T Consensus      3885 gy~CkCpsqysG~~CEi~~epC~snPC~~GgtCip~~n~f~CnC~~gyTG~---~Ce--~~Gi~eCs~n~C~~gg~C~n- 3958 (4289)
T KOG1219|consen 3885 GYKCKCPSQYSGNHCEIDLEPCASNPCLTGGTCIPFYNGFLCNCPNGYTGK---RCE--ARGISECSKNVCGTGGQCIN- 3958 (4289)
T ss_pred             ceEEeCcccccCcccccccccccCCCCCCCCEEEecCCCeeEeCCCCccCc---eee--cccccccccccccCCceeec-
Confidence            5655556666777777899999988 9999999999999999999999999   997  45 89999999999999998 


Q ss_pred             CCCCCCCCCeeeCCCCcccCC
Q psy2457          88 YDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        88 ~~~~~~~~~~c~c~~g~~~~~  108 (189)
                          ..|+|.|.|.+|+.|..
T Consensus      3959 ----~~gsf~CncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3959 ----IPGSFHCNCTPGILGRT 3975 (4289)
T ss_pred             ----cCCceEeccChhHhccc
Confidence                77889999999998766

>KOG1214|consensus

Probab=98.11  E-value=1.6e-05  Score=68.19  Aligned_cols=122  Identities=25%  Similarity=0.554  Sum_probs=79.1

Q ss_pred             CCCCCEEeeCC-CCeeeeCCCCCccCCCCCCcccCCCCCCC--CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC-C
Q psy2457          35 CGVNSECNVRN-HIPVCSCPPGYTGDPLTQCRRFDPHDLCE--PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL-T  110 (189)
Q Consensus        35 C~~~~~C~~~~-~~~~C~c~~g~~~~~~~~c~~~~~~~~c~--~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~-~  110 (189)
                      |.....|.... -.|+|.|..||.+.++ .|   .++++|.  .+.|+..++|++     .++.++|.|..+|.-..- .
T Consensus       702 cdt~a~C~pg~~~~~tcecs~g~~gdgr-~c---~d~~eca~~~~~CGp~s~Cin-----~pg~~rceC~~gy~F~dd~~  772 (1289)
T KOG1214|consen  702 CDTTARCHPGTGVDYTCECSSGYQGDGR-NC---VDENECATGFHRCGPNSVCIN-----LPGSYRCECRSGYEFADDRH  772 (1289)
T ss_pred             cCCCccccCCCCcceEEEEeeccCCCCC-CC---CChhhhccCCCCCCCCceeec-----CCCceeEEEeecceeccCCc
Confidence            55555676654 4689999999998776 67   3567776  456899999998     778899999988753221 1


Q ss_pred             cCccC-CCCCCCCCCCCCccCCCeecCCccccCCCCCEe--eeC-CCCeeeeCCCCCccCCcccCeecCCcc
Q psy2457         111 YCRRG-ECQSDAECNYDQVCNNYNCEKACTSQCGINAQC--TAR-NHVATCSCPAGYQGDALSRCYPAETTS  178 (189)
Q Consensus       111 ~c~~~-~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C--~~~-~g~~~C~C~~G~~g~~~~~c~~~~~~~  178 (189)
                      .|... +-...+.|....            +.|...+.+  ... .+.|.|.|.+||.|++.. |.+++.|.
T Consensus       773 tCV~i~~pap~n~Ce~g~------------h~C~i~g~a~c~~hGgs~y~C~CLPGfsGDG~~-c~dvDeC~  831 (1289)
T KOG1214|consen  773 TCVLITPPAPANPCEDGS------------HTCAIAGQARCVHHGGSTYSCACLPGFSGDGHQ-CTDVDECS  831 (1289)
T ss_pred             ceEEecCCCCCCccccCc------------cccCcCCceEEEecCCceEEEeecCCccCCccc-cccccccC
Confidence            12110 001122232210            146555444  433 358999999999999986 77887764

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=97.99  E-value=3e-06  Score=43.32  Aligned_cols=27  Identities=33%  Similarity=0.784  Sum_probs=24.3

Q ss_pred             cCCCCCEeeeCC-CCeeeeCCCCCccCC
Q psy2457         141 QCGINAQCTARN-HVATCSCPAGYQGDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~-g~~~C~C~~G~~g~~  167 (189)
                      +|.++|+|++.. +.|.|.|++||+|++
T Consensus         5 ~C~n~g~C~~~~~~~y~C~C~~G~~G~~   32 (32)
T PF00008_consen    5 PCQNGGTCIDLPGGGYTCECPPGYTGKR   32 (32)
T ss_dssp             SSTTTEEEEEESTSEEEEEEBTTEESTT
T ss_pred             cCCCCeEEEeCCCCCEEeECCCCCccCC
Confidence            588899999888 999999999999874

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.95  E-value=5.6e-06  Score=45.18  Aligned_cols=24  Identities=38%  Similarity=0.974  Sum_probs=22.4

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQ  164 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~  164 (189)
                      .|...+.|+|..|+|.|.|++||+
T Consensus        11 ~C~~~~~C~N~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen   11 NCPENGTCVNTEGSYSCSCPPGYE   34 (42)
T ss_dssp             SSSTTSEEEEETTEEEEEESTTEE
T ss_pred             cCCCCCEEEcCCCCEEeeCCCCcE
Confidence            587789999999999999999998

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.73  E-value=2e-05  Score=42.95  Aligned_cols=32  Identities=34%  Similarity=0.655  Sum_probs=28.1

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCcc
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTG   58 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~   58 (189)
                      |+++|...   |..++.|+|+.|+|.|.|++||..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~C~~Gy~~   35 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCSCPPGYEL   35 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEEESTTEEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEeeCCCCcEE
Confidence            57788776   887899999999999999999983

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.72  E-value=2.6e-05  Score=40.91  Aligned_cols=28  Identities=43%  Similarity=0.935  Sum_probs=23.2

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      .|+.+|+|++..++|.|.|++||.|++.
T Consensus         7 ~C~~nA~C~~~~~~~~C~C~~Gy~GdG~   34 (36)
T PF12947_consen    7 GCHPNATCTNTGGSYTCTCKPGYEGDGF   34 (36)
T ss_dssp             GS-TTCEEEE-TTSEEEEE-CEEECCST
T ss_pred             CCCCCcEeecCCCCEEeECCCCCccCCc
Confidence            5899999999999999999999999875

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>KOG1217|consensus

Probab=97.60  E-value=0.0006  Score=56.20  Aligned_cols=112  Identities=29%  Similarity=0.662  Sum_probs=70.0

Q ss_pred             ccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCC-------------------CCCCCC--CCCCCC-Ce
Q psy2457          29 RLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDP-------------------HDLCEP--NPCGEN-AK   83 (189)
Q Consensus        29 ~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~-------------------~~~c~~--~~c~~~-~~   83 (189)
                      ++|...   |.+.+.|.+..++|.|.|.++|.+.   .++  ..                   ...|..  ..+... +.
T Consensus       170 ~~C~~~~~~c~~~~~C~~~~~~~~C~c~~~~~~~---~~~--~~~~~~~c~~~~~~~~~~g~~~~~c~~~~~~~~~~~~~  244 (487)
T KOG1217|consen  170 DECIQYSSPCQNGGTCVNTGGSYLCSCPPGYTGS---TCE--TTGNGGTCVDSVACSCPPGARGPECEVSIVECASGDGT  244 (487)
T ss_pred             cccccCCCCcCCCcccccCCCCeeEeCCCCccCC---cCc--CCCCCceEecceeccCCCCCCCCCcccccccccCCCCc
Confidence            556522   7777899998888999999999877   443  11                   001110  112111 45


Q ss_pred             eecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCC
Q psy2457          84 CQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGY  163 (189)
Q Consensus        84 C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~  163 (189)
                      |.+     ..+.+.|.+.+||.+....     .+.+++.|....             .|.++++|.+..+.|.|.|++||
T Consensus       245 c~~-----~~~~~~C~~~~g~~~~~~~-----~~~~~~~C~~~~-------------~c~~~~~C~~~~~~~~C~C~~g~  301 (487)
T KOG1217|consen  245 CVN-----TVGSYTCRCPEGYTGDACV-----TCVDVDSCALIA-------------SCPNGGTCVNVPGSYRCTCPPGF  301 (487)
T ss_pred             ccc-----cCCceeeeCCCCccccccc-----eeeeccccCCCC-------------ccCCCCeeecCCCcceeeCCCCC
Confidence            554     4455788888888776410     122222222210             26777899988888999999999


Q ss_pred             ccCCc
Q psy2457         164 QGDAL  168 (189)
Q Consensus       164 ~g~~~  168 (189)
                      +|..+
T Consensus       302 ~g~~~  306 (487)
T KOG1217|consen  302 TGRLC  306 (487)
T ss_pred             CCCCC
Confidence            98886

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.57  E-value=0.00013  Score=38.67  Aligned_cols=27  Identities=30%  Similarity=0.789  Sum_probs=23.6

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCc-cCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQ-GDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~-g~~  167 (189)
                      +|.++++|++..++|.|.|++||. |..
T Consensus        10 ~C~~~~~C~~~~g~~~C~C~~g~~~g~~   37 (39)
T smart00179       10 PCQNGGTCVNTVGSYRCECPPGYTDGRN   37 (39)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCccCCc
Confidence            587778999999999999999998 654

>KOG1225|consensus

Probab=97.42  E-value=0.00043  Score=57.64  Aligned_cols=92  Identities=34%  Similarity=0.923  Sum_probs=44.2

Q ss_pred             eeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCc
Q psy2457          49 VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQV  128 (189)
Q Consensus        49 ~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~  128 (189)
                      +|.|++||.+.   +|.    ...|... |..++.+.+         ..|.|.++|.|..++   +..|.  ..|..+..
T Consensus       266 ~CIC~~Gf~G~---dC~----e~~Cp~~-cs~~g~~~~---------g~CiC~~g~~G~dCs---~~~cp--adC~g~G~  323 (525)
T KOG1225|consen  266 RCICPPGFTGD---DCD----ELVCPVD-CSGGGVCVD---------GECICNPGYSGKDCS---IRRCP--ADCSGHGK  323 (525)
T ss_pred             eEeCCCCCcCC---CCC----cccCCcc-cCCCceecC---------CEeecCCCccccccc---cccCC--ccCCCCCc
Confidence            46677777666   562    1233222 544444443         367777777766532   22222  23333333


Q ss_pred             cCCCee-------cCCccc-cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         129 CNNYNC-------EKACTS-QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       129 c~~~~c-------~~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      |...+|       -+.|.. .|.+++.|++.     |.|..||+|.+
T Consensus       324 Ci~G~C~C~~Gy~G~~C~~~~C~~~g~cv~g-----C~C~~Gw~G~d  365 (525)
T KOG1225|consen  324 CIDGECLCDEGYTGELCIQRACSGGGQCVNG-----CKCKKGWRGPD  365 (525)
T ss_pred             ccCCceEeCCCCcCCcccccccCCCceeccC-----ceeccCccCCC
Confidence            443333       122322 35555555431     66666666665

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=97.16  E-value=0.00074  Score=35.24  Aligned_cols=27  Identities=33%  Similarity=0.813  Sum_probs=23.5

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      +|.+++.|.+..+.|.|.|++||.|..
T Consensus        10 ~C~~~~~C~~~~~~~~C~C~~g~~g~~   36 (38)
T cd00054          10 PCQNGGTCVNTVGSYRCSCPPGYTGRN   36 (38)
T ss_pred             CcCCCCEeECCCCCeEeECCCCCcCCc
Confidence            477778999999999999999999865

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>KOG1225|consensus

Probab=97.13  E-value=0.002  Score=53.76  Aligned_cols=45  Identities=38%  Similarity=0.989  Sum_probs=35.3

Q ss_pred             eeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCC
Q psy2457          49 VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALT  110 (189)
Q Consensus        49 ~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~  110 (189)
                      .|.|.+||.|.   .|.    +..| +..|...+.|+.         ..|.|.+||.|..+.
T Consensus       297 ~CiC~~g~~G~---dCs----~~~c-padC~g~G~Ci~---------G~C~C~~Gy~G~~C~  341 (525)
T KOG1225|consen  297 ECICNPGYSGK---DCS----IRRC-PADCSGHGKCID---------GECLCDEGYTGELCI  341 (525)
T ss_pred             EeecCCCcccc---ccc----cccC-CccCCCCCcccC---------CceEeCCCCcCCccc
Confidence            79999999999   884    2333 467878888874         689999999998744

>KOG4260|consensus

Probab=97.12  E-value=0.0013  Score=49.84  Aligned_cols=107  Identities=24%  Similarity=0.592  Sum_probs=65.3

Q ss_pred             CCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccC-----------CCC--
Q psy2457          52 CPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRG-----------ECQ--  118 (189)
Q Consensus        52 c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~-----------~c~--  118 (189)
                      |+.|..|+   +|.   .-.--...||...+.|.. +.+ ..|+..|.|..||.|..+..|.+.           .|.  
T Consensus       132 Cp~gtyGp---dCl---~Cpggser~C~GnG~C~G-dGs-R~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~lvCt~C  203 (350)
T KOG4260|consen  132 CPDGTYGP---DCL---QCPGGSERPCFGNGSCHG-DGS-REGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHLVCTAC  203 (350)
T ss_pred             cCCCCcCC---ccc---cCCCCCcCCcCCCCcccC-CCC-CCCCCcccccCCCCCccccccchHHHHhhcccccchhhhh
Confidence            77777777   663   111112356777777754 111 346788999999999887654320           010  


Q ss_pred             -C--CCCCCCC-----CccCC------Cee--cCCccc---cCCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         119 -S--DAECNYD-----QVCNN------YNC--EKACTS---QCGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       119 -~--~~~c~~~-----~~c~~------~~c--~~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                       .  ...|...     ..|.+      .-|  ||+|..   +|..+-.|+|+.|+|.|.+.+||.+.
T Consensus       204 h~~C~~~Csg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g  270 (350)
T KOG4260|consen  204 HEGCLGVCSGESSKGCSKCKKGWKLDEEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG  270 (350)
T ss_pred             hhhhhcccCCCCCCChhhhcccceecccccccHHHHhcCCCCCChhheeecCCCceEecccccccCC
Confidence             0  0011100     01111      112  688865   79888899999999999999999963

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=97.10  E-value=0.0008  Score=35.52  Aligned_cols=32  Identities=38%  Similarity=0.735  Sum_probs=26.2

Q ss_pred             cccchh-h-CCCCCEEeeCCCCeeeeCCCCCc-cC
Q psy2457          28 IRLSDS-Q-CGVNSECNVRNHIPVCSCPPGYT-GD   59 (189)
Q Consensus        28 ~~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~-~~   59 (189)
                      +++|.. . |.+++.|++..++|.|.|+.||. +.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~g~~~C~C~~g~~~g~   36 (39)
T smart00179        2 IDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGR   36 (39)
T ss_pred             cccCcCCCCcCCCCEeECCCCCeEeECCCCCccCC
Confidence            455655 3 87778999999999999999998 65

>KOG1217|consensus

Probab=97.07  E-value=0.0044  Score=51.08  Aligned_cols=115  Identities=26%  Similarity=0.653  Sum_probs=75.4

Q ss_pred             Cccccccchhh--CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC----CCCCCCCCeeecCCCCCCCCCCe
Q psy2457          24 DYLGIRLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE----PNPCGENAKCQPGYDKSGKDRPV   97 (189)
Q Consensus        24 ~c~~~~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~----~~~c~~~~~C~~~~~~~~~~~~~   97 (189)
                      .+.+++.|...  |.++++|++..+.|.|.|++||.+.   .+........|.    ..+|...+.|..   ......+.
T Consensus       267 ~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~C~~g~~g~---~~~~~~~~~~C~~~~~~~~c~~g~~C~~---~~~~~~~~  340 (487)
T KOG1217|consen  267 TCVDVDSCALIASCPNGGTCVNVPGSYRCTCPPGFTGR---LCTECVDVDECSPRNAGGPCANGGTCNT---LGSFGGFR  340 (487)
T ss_pred             eeeeccccCCCCccCCCCeeecCCCcceeeCCCCCCCC---CCccccccccccccccCCcCCCCccccc---CCCCCCCC
Confidence            45577777765  7778899999888999999999988   431002345663    345666666622   01223466


Q ss_pred             eeCCCCcccCCCCcCccCCCCCC-CCCCCCCccCCCeecCCccccCCCCCEeee-CCCCeeeeCCCCCccC
Q psy2457          98 CTCLPGYVGDALTYCRRGECQSD-AECNYDQVCNNYNCEKACTSQCGINAQCTA-RNHVATCSCPAGYQGD  166 (189)
Q Consensus        98 c~c~~g~~~~~~~~c~~~~c~~~-~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~-~~g~~~C~C~~G~~g~  166 (189)
                      |.+..++.+..+        ... ++|...              .+...+.|.+ ..+.|.|.|+.+|.+.
T Consensus       341 C~c~~~~~g~~C--------~~~~~~C~~~--------------~~~~~~~c~~~~~~~~~c~~~~~~~~~  389 (487)
T KOG1217|consen  341 CACGPGFTGRRC--------EDSNDECASS--------------PCCPGGTCVNETPGSYRCACPAGFAGK  389 (487)
T ss_pred             cCCCCCCCCCcc--------ccCCccccCC--------------ccccCCEeccCCCCCeEecCCCccccC
Confidence            888888766653        222 123221              3666788888 6889999999998873

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=96.97  E-value=0.0015  Score=33.48  Aligned_cols=26  Identities=35%  Similarity=0.906  Sum_probs=23.2

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                      +|.+++.|++..+.|.|.|+.||.|.
T Consensus         7 ~C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           7 PCSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCCEEecCCCCeEeECCCCCccc
Confidence            47777899999999999999999987

>KOG4260|consensus

Probab=96.76  E-value=0.00084  Score=50.78  Aligned_cols=82  Identities=17%  Similarity=0.433  Sum_probs=56.7

Q ss_pred             CCCCCCCccCCCCcccCCCCccccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCC
Q psy2457           5 FPPRPGFEPSPSRLVASPRDYLGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGEN   81 (189)
Q Consensus         5 ~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~   81 (189)
                      ..|++||.+.       -..|.|+++|...   |..+..|+|+.|+|.|...+||..- ...|+  ...+.|..    ..
T Consensus       220 ~kCkkGW~ld-------e~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~dk~Gy~~g-~d~C~--~~~d~~~~----kn  285 (350)
T KOG4260|consen  220 SKCKKGWKLD-------EEGCVDVNECQNEPAPCKAHQFCVNTEGSFKCEDKEGYKKG-VDECQ--FCADVCAS----KN  285 (350)
T ss_pred             hhhcccceec-------ccccccHHHHhcCCCCCChhheeecCCCceEecccccccCC-hHHhh--hhhhhccc----CC
Confidence            3567788744       4569999999876   8888899999999999999998752 21453  11122221    23


Q ss_pred             CeeecCCCCCCCCCCeeeCCCCcc
Q psy2457          82 AKCQPGYDKSGKDRPVCTCLPGYV  105 (189)
Q Consensus        82 ~~C~~~~~~~~~~~~~c~c~~g~~  105 (189)
                      ..|++     +.+.|.|+|..++.
T Consensus       286 ~~c~n-----i~~~~r~v~f~~~~  304 (350)
T KOG4260|consen  286 RPCMN-----IDGQYRCVCFSGLI  304 (350)
T ss_pred             CCccc-----CCccEEEEecccce
Confidence            45666     56778899887764

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.75  E-value=0.00074  Score=34.35  Aligned_cols=25  Identities=40%  Similarity=0.867  Sum_probs=22.9

Q ss_pred             CCCCCEEeeCC-CCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRN-HIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~-~~~~C~c~~g~~~~   59 (189)
                      |.++++|+... +.|.|.|++||.|+
T Consensus         6 C~n~g~C~~~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    6 CQNGGTCIDLPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             STTTEEEEEESTSEEEEEEBTTEEST
T ss_pred             CCCCeEEEeCCCCCEEeECCCCCccC
Confidence            88889999998 89999999999876

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.69  E-value=0.0019  Score=30.47  Aligned_cols=23  Identities=39%  Similarity=0.730  Sum_probs=16.9

Q ss_pred             CeeeeCCCCCccC-CcccCeecCC
Q psy2457         154 VATCSCPAGYQGD-ALSRCYPAET  176 (189)
Q Consensus       154 ~~~C~C~~G~~g~-~~~~c~~~~~  176 (189)
                      +|.|.|++||+.. .-.+|.+|++
T Consensus         1 sy~C~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTCSCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEeeCCCCCcCCCCCCccccCCC
Confidence            5899999999943 2255888763

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=96.53  E-value=0.00098  Score=47.73  Aligned_cols=126  Identities=26%  Similarity=0.656  Sum_probs=69.4

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-----CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-----PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL  109 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-----~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~  109 (189)
                      |++ |..+...+.|.|.|..||.......|+   ...+|.     ..+|...+.|........+..+.|.|.+||....-
T Consensus         8 CKN-G~LiQMSNHfEC~Cnegfvl~~EntCE---~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~   83 (197)
T PF06247_consen    8 CKN-GYLIQMSNHFECKCNEGFVLKNENTCE---EKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQG   83 (197)
T ss_dssp             -BT-EEEEEESSEEEEEESTTEEEEETTEEE---E----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSS
T ss_pred             ccC-CEEEEccCceEEEcCCCcEEccccccc---cceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCC
Confidence            553 555555678999999999865443575   234443     35688889998733223345689999999976542


Q ss_pred             CcCccCCCCCCCCCCCCCccC-------CCee------------------cCCccccCCCCCEeeeCCCCeeeeCCCCCc
Q psy2457         110 TYCRRGECQSDAECNYDQVCN-------NYNC------------------EKACTSQCGINAQCTARNHVATCSCPAGYQ  164 (189)
Q Consensus       110 ~~c~~~~c~~~~~c~~~~~c~-------~~~c------------------~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~  164 (189)
                       .|.+..|.+. .|. ...|+       ...|                  ..+|...|..+..|....+-|.|.+.+|+.
T Consensus        84 -vCvp~~C~~~-~Cg-~GKCI~d~~~~~~~~CSC~IGkV~~dn~kCtk~G~T~C~LKCk~nE~CK~~~~~Y~C~~~~~~~  160 (197)
T PF06247_consen   84 -VCVPNKCNNK-DCG-SGKCILDPDNPNNPTCSCNIGKVPDDNKKCTKTGETKCSLKCKENEECKLVDGYYKCVCKEGFP  160 (197)
T ss_dssp             -SEEEGGGSS----T-TEEEEEEEGGGSEEEEEE-TEEETTTTTESEEEE--------TTTEEEEEETTEEEEEE-TT-E
T ss_pred             -eEchhhcCce-ecC-CCeEEecCCCCCCceeEeeeceEeccCCcccCCCccceeeecCCCcceeeeCcEEEeecCCCCC
Confidence             2555555442 222 11120       0122                  245655687778999999999999999987


Q ss_pred             cCC
Q psy2457         165 GDA  167 (189)
Q Consensus       165 g~~  167 (189)
                      ++.
T Consensus       161 ~~~  163 (197)
T PF06247_consen  161 GDG  163 (197)
T ss_dssp             EET
T ss_pred             CCC
Confidence            433

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=96.40  E-value=0.0054  Score=31.81  Aligned_cols=31  Identities=39%  Similarity=0.738  Sum_probs=25.0

Q ss_pred             ccchh-h-CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          29 RLSDS-Q-CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        29 ~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      ++|.. . |.+++.|.+..+.|.|.|..||.+.
T Consensus         3 ~~C~~~~~C~~~~~C~~~~~~~~C~C~~g~~g~   35 (38)
T cd00054           3 DECASGNPCQNGGTCVNTVGSYRCSCPPGYTGR   35 (38)
T ss_pred             ccCCCCCCcCCCCEeECCCCCeEeECCCCCcCC
Confidence            44544 3 7767899999999999999999886

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.32  E-value=0.0037  Score=32.65  Aligned_cols=26  Identities=38%  Similarity=0.926  Sum_probs=21.1

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDP   60 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~   60 (189)
                      |..+++|++..+++.|.|.+||.|.+
T Consensus         8 C~~nA~C~~~~~~~~C~C~~Gy~GdG   33 (36)
T PF12947_consen    8 CHPNATCTNTGGSYTCTCKPGYEGDG   33 (36)
T ss_dssp             S-TTCEEEE-TTSEEEEE-CEEECCS
T ss_pred             CCCCcEeecCCCCEEeECCCCCccCC
Confidence            88889999999999999999999874

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00181 EGF Epidermal growth factor-like domain

Probab=96.23  E-value=0.0074  Score=30.96  Aligned_cols=25  Identities=44%  Similarity=1.006  Sum_probs=21.5

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                      +|.++ .|++..++|.|.|++||.|.
T Consensus         7 ~C~~~-~C~~~~~~~~C~C~~g~~g~   31 (35)
T smart00181        7 PCSNG-TCINTPGSYTCSCPPGYTGD   31 (35)
T ss_pred             CCCCC-EEECCCCCeEeECCCCCccC
Confidence            36666 89989999999999999984

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=95.92  E-value=0.0032  Score=25.16  Aligned_cols=13  Identities=46%  Similarity=1.239  Sum_probs=10.0

Q ss_pred             eeeCCCCCccCCc
Q psy2457         156 TCSCPAGYQGDAL  168 (189)
Q Consensus       156 ~C~C~~G~~g~~~  168 (189)
                      .|.|++||+|.++
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            4899999999874

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.49  E-value=0.012  Score=30.77  Aligned_cols=22  Identities=32%  Similarity=0.711  Sum_probs=17.3

Q ss_pred             CEeeeCCCCeeeeCCCCCccCC
Q psy2457         146 AQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      ..|++.+++|+|.|++||+...
T Consensus        10 h~C~~~~g~~~C~C~~Gy~L~~   31 (36)
T PF14670_consen   10 HICVNTPGSYRCSCPPGYKLAE   31 (36)
T ss_dssp             SEEEEETTSEEEE-STTEEE-T
T ss_pred             CCCccCCCceEeECCCCCEECc
Confidence            3799999999999999998443

...

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=95.20  E-value=0.033  Score=28.24  Aligned_cols=26  Identities=27%  Similarity=0.747  Sum_probs=20.4

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      .|..+++|....  .+|.|.+||.|..+
T Consensus         7 ~C~~~G~C~~~~--g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    7 ICSGHGTCVSPC--GRCVCDSGYTGPDC   32 (32)
T ss_pred             ccCCCCEEeCCC--CEEECCCCCcCCCC
Confidence            377889998652  38999999998763

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.15  E-value=0.034  Score=28.40  Aligned_cols=23  Identities=48%  Similarity=1.057  Sum_probs=20.5

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCcc
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTG   58 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~   58 (189)
                      |.++ .|++..+.|.|.|+.||.+
T Consensus         8 C~~~-~C~~~~~~~~C~C~~g~~g   30 (35)
T smart00181        8 CSNG-TCINTPGSYTCSCPPGYTG   30 (35)
T ss_pred             CCCC-EEECCCCCeEeECCCCCcc
Confidence            6666 8999989999999999988

>KOG1226|consensus

Probab=95.00  E-value=0.24  Score=43.05  Aligned_cols=14  Identities=36%  Similarity=1.189  Sum_probs=11.2

Q ss_pred             eeeCCCCCccCCCCCCc
Q psy2457          49 VCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        49 ~C~c~~g~~~~~~~~c~   65 (189)
                      .|.|.+||.|+   .|+
T Consensus       479 ~C~C~~G~~G~---~CE  492 (783)
T KOG1226|consen  479 QCRCDEGWLGK---KCE  492 (783)
T ss_pred             ceecCCCCCCC---ccc
Confidence            47899999988   664

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=94.85  E-value=0.043  Score=27.74  Aligned_cols=25  Identities=44%  Similarity=0.979  Sum_probs=21.9

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.+++.|++..+.+.|.|+.||.+.
T Consensus         8 C~~~~~C~~~~~~~~C~C~~g~~g~   32 (36)
T cd00053           8 CSNGGTCVNTPGSYRCVCPPGYTGD   32 (36)
T ss_pred             CCCCCEEecCCCCeEeECCCCCccc
Confidence            7667899999899999999999765

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=94.74  E-value=0.033  Score=29.06  Aligned_cols=23  Identities=39%  Similarity=0.798  Sum_probs=19.1

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.+  +|++.+++++|.|++||...
T Consensus         8 C~h--~C~~~~g~~~C~C~~Gy~L~   30 (36)
T PF14670_consen    8 CSH--ICVNTPGSYRCSCPPGYKLA   30 (36)
T ss_dssp             SSS--EEEEETTSEEEE-STTEEE-
T ss_pred             cCC--CCccCCCceEeECCCCCEEC
Confidence            765  99999999999999999865

...

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=94.69  E-value=0.024  Score=26.68  Aligned_cols=22  Identities=23%  Similarity=0.285  Sum_probs=18.5

Q ss_pred             cCCCCCCCccCCCCcccCCCCcccccc
Q psy2457           4 KFPPRPGFEPSPSRLVASPRDYLGIRL   30 (189)
Q Consensus         4 ~~~~~~gf~~~~~~~~~~~~~c~~~~~   30 (189)
                      ...|..||.+.     .+.+.|.||++
T Consensus         3 ~C~C~~Gy~l~-----~d~~~C~DIdE   24 (24)
T PF12662_consen    3 TCSCPPGYQLS-----PDGRSCEDIDE   24 (24)
T ss_pred             EeeCCCCCcCC-----CCCCccccCCC
Confidence            45789999988     78899999885

>KOG1226|consensus

Probab=92.24  E-value=1.2  Score=38.97  Aligned_cols=58  Identities=29%  Similarity=0.730  Sum_probs=35.6

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCc----cCCCCCCcccCCCCCCCC---CCCCCCCeeecCCCCCCCCCCeeeCCCCcccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYT----GDPLTQCRRFDPHDLCEP---NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGD  107 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~----~~~~~~c~~~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~  107 (189)
                      |...|.|.=.    .|.|.....    |+   .|+  -+--.|..   ..|...+.|.-         ..|+|.+||.|.
T Consensus       516 CSgrG~C~CG----qC~C~~~~~~~i~G~---fCE--CDnfsC~r~~g~lC~g~G~C~C---------G~CvC~~GwtG~  577 (783)
T KOG1226|consen  516 CSGRGDCVCG----QCVCHKPDNGKIYGK---FCE--CDNFSCERHKGVLCGGHGRCEC---------GRCVCNPGWTGS  577 (783)
T ss_pred             cCCCCcEeCC----ceEecCCCCCceeee---eee--ccCcccccccCcccCCCCeEeC---------CcEEcCCCCccC
Confidence            5555555321    366665554    55   664  23333432   34777777764         679999999999


Q ss_pred             CCC
Q psy2457         108 ALT  110 (189)
Q Consensus       108 ~~~  110 (189)
                      .+.
T Consensus       578 ~C~  580 (783)
T KOG1226|consen  578 ACN  580 (783)
T ss_pred             CCC
Confidence            865

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=89.89  E-value=0.12  Score=26.94  Aligned_cols=28  Identities=29%  Similarity=0.592  Sum_probs=19.7

Q ss_pred             cCCCCCEeeeCC-CCeeeeCCCCCccCCc
Q psy2457         141 QCGINAQCTARN-HVATCSCPAGYQGDAL  168 (189)
Q Consensus       141 ~C~~~~~C~~~~-g~~~C~C~~G~~g~~~  168 (189)
                      .|..++.|++.. |.+.|.|..||+.++-
T Consensus         6 ~cP~NA~C~~~~dG~eecrCllgyk~~~~   34 (37)
T PF12946_consen    6 KCPANAGCFRYDDGSEECRCLLGYKKVGG   34 (37)
T ss_dssp             ---TTEEEEEETTSEEEEEE-TTEEEETT
T ss_pred             cCCCCcccEEcCCCCEEEEeeCCccccCC
Confidence            466778898776 9999999999986553

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=89.27  E-value=0.38  Score=35.96  Aligned_cols=36  Identities=19%  Similarity=0.331  Sum_probs=29.1

Q ss_pred             CCCccccccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          22 PRDYLGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        22 ~~~c~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      ...|.+.++|...   |.+  .|.++.|+|.|.|+.||...
T Consensus       181 ~~~C~~~~~C~~~~~~c~~--~C~~~~g~~~c~c~~g~~~~  219 (224)
T cd01475         181 GKICVVPDLCATLSHVCQQ--VCISTPGSYLCACTEGYALL  219 (224)
T ss_pred             cccCcCchhhcCCCCCccc--eEEcCCCCEEeECCCCccCC
Confidence            4467788888654   654  89999999999999999864

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PHA02887 EGF-like protein; Provisional

Probab=87.76  E-value=0.62  Score=30.93  Aligned_cols=28  Identities=29%  Similarity=0.560  Sum_probs=21.1

Q ss_pred             cCCCCCEeeeC--CCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTAR--NHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~--~g~~~C~C~~G~~g~~~~  169 (189)
                      .|. +|+|.-.  ...+.|.|+.||+|.+|.
T Consensus        93 YCi-HG~C~yI~dL~epsCrC~~GYtG~RCE  122 (126)
T PHA02887         93 FCI-NGECMNIIDLDEKFCICNKGYTGIRCD  122 (126)
T ss_pred             Eee-CCEEEccccCCCceeECCCCcccCCCC
Confidence            466 4688543  456789999999999964

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=87.34  E-value=0.93  Score=30.64  Aligned_cols=52  Identities=27%  Similarity=0.590  Sum_probs=35.9

Q ss_pred             CCccCCCCcccCCCCccccccchhh----CCCCCEEeeCC--CCeeeeCCCCCccCCCCCCc
Q psy2457          10 GFEPSPSRLVASPRDYLGIRLSDSQ----CGVNSECNVRN--HIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        10 gf~~~~~~~~~~~~~c~~~~~c~~~----C~~~~~C~~~~--~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ..+-.+.++......-.++.+|...    |-+ |.|.-..  ..+.|.|..||.|.   .|+
T Consensus        24 ~~~~~~~~~~~~~~~~~~i~~Cp~ey~~YClH-G~C~yI~dl~~~~CrC~~GYtGe---RCE   81 (139)
T PHA03099         24 AIETTSPEITNATTDIPAIRLCGPEGDGYCLH-GDCIHARDIDGMYCRCSHGYTGI---RCQ   81 (139)
T ss_pred             eeeecChhhccCccCCcccccCChhhCCEeEC-CEEEeeccCCCceeECCCCcccc---ccc
Confidence            3344445544444455567777665    776 5887654  67899999999999   996

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=86.49  E-value=0.76  Score=31.05  Aligned_cols=28  Identities=25%  Similarity=0.522  Sum_probs=21.6

Q ss_pred             cCCCCCEeee--CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTA--RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+ |+|.-  ....+.|.|..||+|++|.
T Consensus        52 YClH-G~C~yI~dl~~~~CrC~~GYtGeRCE   81 (139)
T PHA03099         52 YCLH-GDCIHARDIDGMYCRCSHGYTGIRCQ   81 (139)
T ss_pred             EeEC-CEEEeeccCCCceeECCCCccccccc
Confidence            4666 47854  3467899999999999975

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=85.48  E-value=0.91  Score=33.91  Aligned_cols=25  Identities=24%  Similarity=0.565  Sum_probs=20.5

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      .|.  ..|.+..|+|.|.|+.||+...
T Consensus       196 ~c~--~~C~~~~g~~~c~c~~g~~~~~  220 (224)
T cd01475         196 VCQ--QVCISTPGSYLCACTEGYALLE  220 (224)
T ss_pred             Ccc--ceEEcCCCCEEeECCCCccCCC
Confidence            455  4799999999999999998543

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=83.29  E-value=1.4  Score=24.49  Aligned_cols=23  Identities=26%  Similarity=0.725  Sum_probs=17.0

Q ss_pred             eeeCCCCeeeeCCCCCccCCcccCe
Q psy2457         148 CTARNHVATCSCPAGYQGDALSRCY  172 (189)
Q Consensus       148 C~~~~g~~~C~C~~G~~g~~~~~c~  172 (189)
                      |....|  .|.|+++++|..+..|.
T Consensus        14 C~~~~G--~C~C~~~~~G~~C~~C~   36 (50)
T cd00055          14 CDPGTG--QCECKPNTTGRRCDRCA   36 (50)
T ss_pred             ccCCCC--EEeCCCcCCCCCCCCCC
Confidence            543334  79999999999987664

>KOG0994|consensus

Probab=83.10  E-value=2  Score=39.62  Aligned_cols=25  Identities=32%  Similarity=0.834  Sum_probs=16.7

Q ss_pred             EeeeCCCCeeeeCCCCCccCCcccCee
Q psy2457         147 QCTARNHVATCSCPAGYQGDALSRCYP  173 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~g~~~~~c~~  173 (189)
                      +|-...|  .|+|.+||-|..+..|.+
T Consensus      1078 qCN~ftG--QCqCkpGfGGR~C~qCqe 1102 (1758)
T KOG0994|consen 1078 QCNEFTG--QCQCKPGFGGRTCSQCQE 1102 (1758)
T ss_pred             ccccccc--ceeccCCCCCcchhHHHH
Confidence            4544444  689999998887654443

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=81.74  E-value=0.94  Score=25.07  Aligned_cols=25  Identities=28%  Similarity=0.798  Sum_probs=17.6

Q ss_pred             EeeeCCCCeeeeCCCCCccCCcccCee
Q psy2457         147 QCTARNHVATCSCPAGYQGDALSRCYP  173 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~g~~~~~c~~  173 (189)
                      .|....|  .|.|+++|+|..+..|.+
T Consensus        12 ~C~~~~G--~C~C~~~~~G~~C~~C~~   36 (49)
T PF00053_consen   12 TCDPSTG--QCVCKPGTTGPRCDQCKP   36 (49)
T ss_dssp             SEEETCE--EESBSTTEESTTS-EE-T
T ss_pred             cccCCCC--EEeccccccCCcCcCCCC
Confidence            5655444  899999999999876643

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	189
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	2e-04
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	2e-04
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	4e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	5e-04
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	7e-04
2vh0_B	134	Activated factor XA light chain; serine protease,	8e-04

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} Length = 143

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)

Query: 50  CSCPPGYTG-------DPLTQCRRFDPHDLCEPNPCGENAKCQ--PGYDKSGKDRPVCTC 100
           C CP G+T        +  +          C PNPC     C+    Y        VC C
Sbjct: 25  CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKC 84

Query: 101 LPGYVGD----ALTYCRRGECQSDAECNYDQVCNNYNCE 135
             G+ G      +  C    C++   C  D V  NY+CE
Sbjct: 85  PRGFNGIHCQHNINECEVEPCKNGGICT-DLV-ANYSCE 121

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 23/134 (17%), Positives = 34/134 (25%), Gaps = 27/134 (20%)

Query: 41  CNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTC 100
            N   +  + +                       P  C     C            +C C
Sbjct: 126 MNSEGNTILKTPQNAIFFK--------TCQQAECPGGCRNGGFCNERR--------ICEC 169

Query: 101 LPGYVGDA-LTYCRRGECQSDAECNYDQVCN------NYNCEKA-CTSQCGINAQCTARN 152
             G+ G           C +   C     C         NC+KA C++ C     C    
Sbjct: 170 PDGFHGPHCEKALCTPRCMNGGLCVTPGFCICPPGFYGVNCDKANCSTTCFNGGTCFYPG 229

Query: 153 HVATCSCPAGYQGD 166
               C CP G +G+
Sbjct: 230 ---KCICPPGLEGE 240

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 27/129 (20%), Positives = 37/129 (28%), Gaps = 27/129 (20%)

Query: 50  CSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109
            +C  G+ G    +C R     +C      ++  C+   D        C C  G+ G   
Sbjct: 52  KTCMEGWMGP---ECNR----AICRQGCSPKHGSCKLPGD--------CRCQYGWQGLYC 96

Query: 110 TYCRRGECQSDAECNYDQVCN------NYNCEK-----ACTSQCGINAQCTARNHVA-TC 157
             C          CN    C          C+K          C     C+        C
Sbjct: 97  DKCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQC 156

Query: 158 SCPAGYQGD 166
           SCP GY G 
Sbjct: 157 SCPEGYSGP 165

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 15/119 (12%)

Query: 49  VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA 108
           +C C  GY G              CE    G +++   G  +   +  +C+ L   V   
Sbjct: 447 ICRCDTGYIGK------------NCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQ 494

Query: 109 LTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDA 167
              C   +            C+  NCE+     CG   +         C C  G++G A
Sbjct: 495 -CLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC--GKCRCHPGFEGSA 550

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* Length = 135

 Score = 37.2 bits (87), Expect = 7e-04
 Identities = 31/121 (25%), Positives = 40/121 (33%), Gaps = 39/121 (32%)

Query: 50  CSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109
           C C  GYTG    +C      + C  NPC  +A C             C C+PGY G   
Sbjct: 30  CQCLQGYTG---PRCEI--DVNECVSNPCQNDATCL-----DQIGEFQCICMPGYEGV-- 77

Query: 110 TYCRRGECQSDAECNYDQVCNNYNCEK---ACTSQ-CGINAQCTARNHVATCSCPAGYQG 165
                                  +CE     C S  C  N +C  + +   C CP G+ G
Sbjct: 78  -----------------------HCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTG 114

Query: 166 D 166
            
Sbjct: 115 H 115

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... Length = 134

 Score = 36.9 bits (86), Expect = 8e-04
 Identities = 26/117 (22%), Positives = 33/117 (28%), Gaps = 30/117 (25%)

Query: 50  CSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL 109
                        +       D CE +PC    KC     K G     CTCL G+ G   
Sbjct: 27  EDSDKTNEFWNKYK-----DGDQCETSPCQNQGKC-----KDGLGEYTCTCLEGFEG--- 73

Query: 110 TYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGD 166
             C         E    ++C+  N        C     C    +   CSC  GY   
Sbjct: 74  KNC---------ELFTRKLCSLDNG------DCD--QFCHEEQNSVVCSCARGYTLA 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.73
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.61
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.54
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.48
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.46
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.26
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.18
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.16
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.14
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.07
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	99.04
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.02
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.99
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.98
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.95
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.94
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.92
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.9
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.82
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.8
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.79
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.78
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.78
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.77
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.76
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.74
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	98.71
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.7
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.69
2vh0_B	134	Activated factor XA light chain; serine protease,	98.67
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.65
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.65
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.61
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	98.6
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	98.55
2vh0_B	134	Activated factor XA light chain; serine protease,	98.54
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.51
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.51
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.44
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.42
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.41
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	98.4
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	98.37
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.37
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	98.31
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.27
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.16
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.1
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	98.03
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	98.03
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.98
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.89
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.87
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.83
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	97.82
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.8
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.8
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.76
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.69
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.64
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.62
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	97.6
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	97.6
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.54
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	97.45
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.44
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.44
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	97.43
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.38
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	97.36
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.36
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	97.27
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.23
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	97.21
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	97.2
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.08
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.05
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	97.03
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	97.01
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	96.92
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	96.88
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.86
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	96.82
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.81
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	96.75
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.75
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.69
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.47
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.3
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.24
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	96.23
2wph_E	59	Coagulation factor IXA light chain; serine proteas	96.03
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	95.93
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	95.82
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	95.66
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	95.58
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	95.4
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	95.27
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	95.16
2i9a_A	145	Urokinase-type plasminogen activator; growth facto	95.13
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	94.89
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	94.89
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	94.78
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	94.69
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	94.62
1ob1_C	99	Major merozoite surface protein; immune system, im	94.04
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	93.8
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	93.59
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	93.2
1szb_A	170	Mannose binding lectin-associated serine protease-	93.02
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	92.92
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	92.87
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	92.81
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	92.72
3asi_A	410	Neurexin-1-alpha; beta-sandwich, cell adhesion, sy	92.26
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	92.2
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	91.83
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.99
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	90.98
1ob1_C	99	Major merozoite surface protein; immune system, im	90.37
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	90.13
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	89.62
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	89.52
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	89.03
2wph_E	59	Coagulation factor IXA light chain; serine proteas	88.5
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	87.43
1q4g_A	553	Prostaglandin G/H synthase 1; cyclooxygenase, non-	87.09
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	86.98
1nzi_A	159	Complement C1S component; calcium, innate immunity	86.87
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	85.51
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	84.59
3qcw_A	1245	Neurexin-1-alpha; synaptic adhesion molecule, cell	84.38
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	82.42
1nzi_A	159	Complement C1S component; calcium, innate immunity	82.16
1g1t_A	157	E-selectin; EGF, adhesion molecule, SLEX, immune s	82.07
1szb_A	170	Mannose binding lectin-associated serine protease-	80.78
1oig_A	26	Dumpy, CG33196-PB; structural protein; NMR {Drosop	80.72
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	80.48

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.73  E-value=3.4e-17  Score=112.50  Aligned_cols=120  Identities=26%  Similarity=0.581  Sum_probs=95.2

Q ss_pred             ccccccchh--h-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          25 YLGIRLSDS--Q-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        25 c~~~~~c~~--~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      +.++++|..  . |.++++|++..++|.|.|++||.+.   .|+  .++++|...+|...++|++     ..+.|.|.|+
T Consensus         2 c~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~---~C~--~~~~~C~~~~C~~~~~C~~-----~~g~~~C~C~   71 (135)
T 2vj3_A            2 AQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP---RCE--IDVNECVSNPCQNDATCLD-----QIGEFQCICM   71 (135)
T ss_dssp             -CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST---TSC--EECCTTTTCCCCSSCEEEE-----CSSCEEEECC
T ss_pred             CcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC---ccc--ccCccCCCCCCCCCCEEeC-----CCCCceeeCC
Confidence            678899983  3 9989999999999999999999998   886  4688999899999999998     5678999999


Q ss_pred             CCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcccCeecCCc
Q psy2457         102 PGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRCYPAETT  177 (189)
Q Consensus       102 ~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~~  177 (189)
                      +||.|..+.       .++++|...              +|.++++|++..++|.|.|++||+|..+.  .++..+
T Consensus        72 ~G~~G~~C~-------~~~~~C~~~--------------~C~~~g~C~~~~g~~~C~C~~G~~G~~C~--~~i~~C  124 (135)
T 2vj3_A           72 PGYEGVHCE-------VNTDECASS--------------PCLHNGRCLDKINEFQCECPTGFTGHLCQ--VDLHHI  124 (135)
T ss_dssp             TTEESSSSC-------EECCTTTTC--------------CSTTTCEEEECSSCEEEECCTTEESSSSC--EECC--
T ss_pred             CCCcCCcce-------ecCCcccCC--------------CcCCCCEeECCCCCeEEECCCCCcCCccC--ccCccc
Confidence            999987532       022233221              58888999999999999999999998753  355554

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.61  E-value=2.8e-15  Score=103.82  Aligned_cols=115  Identities=27%  Similarity=0.624  Sum_probs=82.2

Q ss_pred             cchhh-CCCCCEEeeCC--CCeeeeCCCCCccCCCCCCccc----------CCCCCCCCCCCCCCCeeecCCC--CCCCC
Q psy2457          30 LSDSQ-CGVNSECNVRN--HIPVCSCPPGYTGDPLTQCRRF----------DPHDLCEPNPCGENAKCQPGYD--KSGKD   94 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~~--~~~~C~c~~g~~~~~~~~c~~~----------~~~~~c~~~~c~~~~~C~~~~~--~~~~~   94 (189)
                      +|... |.++++|++..  ++|.|.|++||.+.   .|+..          ..+++|...+|.+.+.|.....  ....+
T Consensus         2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~---~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~   78 (143)
T 4d90_A            2 ICDPNPCENGGICLPGLADGSFSCECPDGFTDP---NCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFI   78 (143)
T ss_dssp             -CCSCCCGGGCEEEC-----CCEEECCTTCCTT---TTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEEC
T ss_pred             cCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC---CCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCC
Confidence            34444 77788999865  68999999999988   67410          1346777888999999983000  00335


Q ss_pred             CCeeeCCCCcccCCCCcCccCCCC-CCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457          95 RPVCTCLPGYVGDALTYCRRGECQ-SDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus        95 ~~~c~c~~g~~~~~~~~c~~~~c~-~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.|.|++||.|..        |. ++++|...              +|.++++|++..++|.|.|++||+|+++.
T Consensus        79 ~~~C~C~~G~~G~~--------C~~~i~~C~~~--------------~C~~~~~C~~~~g~~~C~C~~G~~G~~c~  132 (143)
T 4d90_A           79 GYVCKCPRGFNGIH--------CQHNINECEVE--------------PCKNGGICTDLVANYSCECPGEFMGRNCQ  132 (143)
T ss_dssp             CEEEECCTTEESTT--------SCEECCTTTTC--------------CSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred             CeEeECcCCCcCCC--------cccCCCcCCCC--------------CCCCCCEeECCCCCeEeECCCCCccCCce
Confidence            79999999998875        33 33333321              58888999999999999999999999975

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.54  E-value=3.4e-16  Score=113.20  Aligned_cols=132  Identities=25%  Similarity=0.491  Sum_probs=97.9

Q ss_pred             CCCCCCccCCCCcccCCCCccccccch----hh-CCCCCEEeeCC-----CCeeeeCCCCCccCCCCCCcccCCCCCCCC
Q psy2457           6 PPRPGFEPSPSRLVASPRDYLGIRLSD----SQ-CGVNSECNVRN-----HIPVCSCPPGYTGDPLTQCRRFDPHDLCEP   75 (189)
Q Consensus         6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~----~~-C~~~~~C~~~~-----~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~   75 (189)
                      .|.+||.+.      +...|.++++|.    .. |.++++|++..     ++|.|.|++||.+... .|    .+++|..
T Consensus        28 ~C~~G~~g~------~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~-~C----~~d~C~~   96 (186)
T 1z1y_A           28 MCNEGLVHL------SENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED-TC----VLDVCQY   96 (186)
T ss_dssp             EECTTEEEE------ETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT-EE----EEGGGTT
T ss_pred             ECCCCCccC------CCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC-CC----CCCcCcC
Confidence            467788753      345688999998    34 88889999998     8999999999998732 23    3688888


Q ss_pred             CCCCCCCeee----cCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccC-CCCCEeee
Q psy2457          76 NPCGENAKCQ----PGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQC-GINAQCTA  150 (189)
Q Consensus        76 ~~c~~~~~C~----~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C-~~~~~C~~  150 (189)
                      .+|...+.|+    +     ..++|.|.|++||.+....   ...|.++.             +++|..+| .++++|++
T Consensus        97 ~~C~~~g~C~~~~~~-----~~g~~~C~C~~Gy~g~~~~---~~~C~~~~-------------~~~C~~~C~~~~~~C~n  155 (186)
T 1z1y_A           97 XNCGESGECIVEYLS-----EIQSAGCSCAIGXVPNPED---EXXCTXTG-------------ETACQLXCNTDNEVCXN  155 (186)
T ss_dssp             CCCCTTEEEEEEEET-----TEEEEEEEECTEEEEETTT---TTEEEEEE-------------CCCCCCCCCTTTEEEEE
T ss_pred             CCCCCCCEEeeCCcC-----CCCCceEECCCCCcccCCC---CCcceEcC-------------CCcccccccccCcceec
Confidence            8999889998    5     4567999999999884210   01122210             12333358 77899999


Q ss_pred             CCCCeeeeCCCCCccCCcc
Q psy2457         151 RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       151 ~~g~~~C~C~~G~~g~~~~  169 (189)
                      ..++|.|.|++||+|+.+.
T Consensus       156 ~~g~y~C~C~~G~~g~~~~  174 (186)
T 1z1y_A          156 VEGVYXCQCMEGFTFDXEX  174 (186)
T ss_dssp             ETTEEEEEECTTCEEETTT
T ss_pred             CCCCeeeECCCCCccCccc
Confidence            9999999999999988864

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.48  E-value=1.1e-13  Score=115.67  Aligned_cols=121  Identities=27%  Similarity=0.626  Sum_probs=90.7

Q ss_pred             ccccchhh-CCCCCEEeeCCC-Ceee-eCCCCCccCCCCCCcccCCCCCCCCCC--CCCCC---eeecCCCCCCCCCCee
Q psy2457          27 GIRLSDSQ-CGVNSECNVRNH-IPVC-SCPPGYTGDPLTQCRRFDPHDLCEPNP--CGENA---KCQPGYDKSGKDRPVC   98 (189)
Q Consensus        27 ~~~~c~~~-C~~~~~C~~~~~-~~~C-~c~~g~~~~~~~~c~~~~~~~~c~~~~--c~~~~---~C~~~~~~~~~~~~~c   98 (189)
                      ++++|... |.++++|++..+ +|.| .|++||.+... .|   ..+++|...+  |...+   .|.+     ..++|.|
T Consensus         2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~C---eDiDEC~~~p~~C~~gg~~~~CvN-----t~gsY~C   72 (634)
T 1yo8_A            2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HC---EDLDECALVPDICFSTSKVPRCVN-----TQPGFHC   72 (634)
T ss_dssp             --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SC---CBCCTTTTSCCCSCCCSSSCCEEE-----CSSSEEE
T ss_pred             cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC-Cc---cccccccCCCCcccCCccccceee-----ccCceec
Confidence            57888766 998899999874 5999 99999998433 79   4789998777  98888   8998     6678999


Q ss_pred             e-CCCCcccCCCCcC-------ccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCC----CCeeeeCCCCC
Q psy2457          99 T-CLPGYVGDALTYC-------RRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARN----HVATCSCPAGY  163 (189)
Q Consensus        99 ~-c~~g~~~~~~~~c-------~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~----g~~~C~C~~G~  163 (189)
                      . |++||.|..+..-       ....|..               +++|..   +|.++++|++..    ++|+|.|++||
T Consensus        73 ~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d---------------ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy  137 (634)
T 1yo8_A           73 LPCPPRYRGNQPVGVGLEAAKTEKQVCEP---------------ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY  137 (634)
T ss_dssp             CCCCTTEEECCCEESSSHHHHSCCCCEEE---------------CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred             ccCCCCcccCccccccccccccCCCcccc---------------cccccCCCcccccCccccccccccccceeeeccCCc
Confidence            8 9999998763200       0011323               344432   699899999998    99999999999


Q ss_pred             ccCCcccCe
Q psy2457         164 QGDALSRCY  172 (189)
Q Consensus       164 ~g~~~~~c~  172 (189)
                      +|++.. |.
T Consensus       138 ~GdG~~-Ce  145 (634)
T 1yo8_A          138 AGDGLI-CG  145 (634)
T ss_dssp             EESSSS-EE
T ss_pred             cccCcc-cc
Confidence            985433 54

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.46  E-value=4.9e-14  Score=97.58  Aligned_cols=120  Identities=23%  Similarity=0.540  Sum_probs=86.5

Q ss_pred             chhhCCCCCEEeeCCCCeeeeCCCCCccCC------CCCCcccCCCCCCCCC---CCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          31 SDSQCGVNSECNVRNHIPVCSCPPGYTGDP------LTQCRRFDPHDLCEPN---PCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        31 c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~------~~~c~~~~~~~~c~~~---~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      |..+|.++++|++.   |.|.|++||.+..      ...|+   ++++|...   +|...+.|++     ..++|.|.|+
T Consensus         5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~---dideC~~~~~~~C~~~~~C~n-----~~g~y~C~C~   73 (143)
T 2bou_A            5 CARWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD---DINECATLSKVSCGKFSDCWN-----TEGSYDCVCS   73 (143)
T ss_dssp             CCTTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE---ECCGGGC----CCCTTEEEEE-----CSSCEEEEEC
T ss_pred             CcCcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC---ccccccCCCCCCCCCCCEEEc-----CCCCeEeECC
Confidence            33347778899764   8999999999741      12673   67888764   8988899998     6678999999


Q ss_pred             CCcccCCCCc-C---ccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCee
Q psy2457         102 PGYVGDALTY-C---RRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARNHVATCSCPAGYQGDAL-SRCYP  173 (189)
Q Consensus       102 ~g~~~~~~~~-c---~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~~  173 (189)
                      +||.+..... +   ....|.+               +|+|..   +|.++++|++..++|.|.|++||+|... ..|.+
T Consensus        74 ~Gy~g~~~~~~~~~~~~~~C~d---------------ideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~  138 (143)
T 2bou_A           74 PGYEPVSGAKTFKNESENTCQD---------------VDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK  138 (143)
T ss_dssp             TTEEETTCCSCBSSGGGCCEEE---------------CCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred             CCcccCcCccccccCCCCCcCC---------------ccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence            9998874210 0   0012333               455542   6988899999999999999999998875 34665


Q ss_pred             cCC
Q psy2457         174 AET  176 (189)
Q Consensus       174 ~~~  176 (189)
                      ..+
T Consensus       139 ~~~  141 (143)
T 2bou_A          139 DTV  141 (143)
T ss_dssp             TCC
T ss_pred             CCc
Confidence            554

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.26  E-value=6.7e-13  Score=95.78  Aligned_cols=100  Identities=25%  Similarity=0.588  Sum_probs=78.3

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC----CCCCCCCCeeecCCCCCCC-----CCCeeeCCCCcc
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE----PNPCGENAKCQPGYDKSGK-----DRPVCTCLPGYV  105 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~----~~~c~~~~~C~~~~~~~~~-----~~~~c~c~~g~~  105 (189)
                      |.+ ++|++..++|+|.|++||.+.+...|+   ++++|.    ..+|...+.|++     ..     ++|.|.|++||.
T Consensus        13 C~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~---~id~C~~~~~~~~C~~~~~C~~-----~~~~~~~g~y~C~C~~G~~   83 (186)
T 1z1y_A           13 CXN-GQLVQMSNHFXCMCNEGLVHLSENTCE---EXNECXXETLGXACGEFGQCIE-----NPDPAQVNMYXCGCIEGYT   83 (186)
T ss_dssp             CBT-EEEEECSSCEEEEECTTEEEEETTEEE---ECCCCSGGGTTSEEETTEEEEE-----CSSTTSSCSEEEEECTTEE
T ss_pred             CCC-CEeECCCCCeEeECCCCCccCCCCccC---CCCcccCCCCCCCCCCCCEeec-----CCCCcCCCCEECCCCCCCc
Confidence            664 599999999999999999876322574   678998    678988899998     44     689999999999


Q ss_pred             cCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCCEee----eCCCCeeeeCCCCCcc
Q psy2457         106 GDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINAQCT----ARNHVATCSCPAGYQG  165 (189)
Q Consensus       106 ~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~~C~----~~~g~~~C~C~~G~~g  165 (189)
                      +.... |++                     ++|.. +|.++++|+    +..++|.|.|++||+|
T Consensus        84 g~~~~-C~~---------------------d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g  126 (186)
T 1z1y_A           84 LXEDT-CVL---------------------DVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVP  126 (186)
T ss_dssp             EETTE-EEE---------------------GGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred             cCCCC-CCC---------------------CcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence            87532 222                     23322 577788898    7788999999999998

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.18  E-value=1e-11  Score=83.06  Aligned_cols=108  Identities=22%  Similarity=0.544  Sum_probs=74.3

Q ss_pred             cccccchhh-CCCCCEEeeC-CCCeeeeCCCCCccCCC--CCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          26 LGIRLSDSQ-CGVNSECNVR-NHIPVCSCPPGYTGDPL--TQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        26 ~~~~~c~~~-C~~~~~C~~~-~~~~~C~c~~g~~~~~~--~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      .++++|... |.+  +|++. .++|.|.|++||.+...  ..|+     ++|...+|.  +.|.+     . +.|.|.|+
T Consensus         2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~-----~~C~~~~C~--~~C~~-----~-~~y~C~C~   66 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQ-----MFCNQTACP--ADCDP-----N-TQASCECP   66 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEE-----ECCCSSEEE--CEECT-----T-STTCEECC
T ss_pred             CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccc-----cccCCCCCC--CcccC-----C-CCeEeECC
Confidence            367888766 874  99999 89999999999998721  0131     234444554  56764     2 67999999


Q ss_pred             CCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         102 PGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       102 ~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      +||.+..-     ..|.++++|...             .+|  +++|++..++|.|.|++||+|...
T Consensus        67 ~Gy~~~~g-----~~C~dideC~~~-------------~~C--~~~C~n~~g~y~C~C~~G~~g~~~  113 (118)
T 1dx5_I           67 EGYILDDG-----FICTDIDECENG-------------GFC--SGVCHNLPGTFECICGPDSALAGQ  113 (118)
T ss_dssp             TTEEEETT-----TEEEECCHHHHC-------------SSC--SSEEEECSSSEEEEECSSSSCEEE
T ss_pred             CCccCCCC-----CccccccccCCC-------------CCC--cCeEEeCCCCEEEECCCCCccCCC
Confidence            99985421     124343333220             157  579999999999999999987553

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.16  E-value=5.3e-12  Score=89.09  Aligned_cols=127  Identities=20%  Similarity=0.459  Sum_probs=76.8

Q ss_pred             ccccchh-h-CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCCC--CCC--CCC--CCCCeeecCCCCCCCC---
Q psy2457          27 GIRLSDS-Q-CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHDL--CEP--NPC--GENAKCQPGYDKSGKD---   94 (189)
Q Consensus        27 ~~~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~~--c~~--~~c--~~~~~C~~~~~~~~~~---   94 (189)
                      |+++|.. . |. +++|+++.++|+|.|++||.+... ..|+   ++++  |..  .++  ...+.|.+     ..+   
T Consensus         2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~---d~~~~~C~~~~~~c~~~~~~~C~~-----~~~~~~   72 (162)
T 1uzk_A            2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV---DTRSGNCYLDIRPRGDNGDTACSN-----EIGVGV   72 (162)
T ss_dssp             CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE---CCCCEEEEEEC----------CEE-----EEEEEE
T ss_pred             ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc---CCCCCcccCCCcccCCCCCCcccC-----CcCCcc
Confidence            6788875 3 86 589999999999999999984311 1674   4554  643  223  23556765     223   


Q ss_pred             -CCeeeCCCCcc-cCCCCcCccCCCCCCC------CCCC--CCccC--CCee--cCCccc---cCCCCCEeeeCCCCeee
Q psy2457          95 -RPVCTCLPGYV-GDALTYCRRGECQSDA------ECNY--DQVCN--NYNC--EKACTS---QCGINAQCTARNHVATC  157 (189)
Q Consensus        95 -~~~c~c~~g~~-~~~~~~c~~~~c~~~~------~c~~--~~~c~--~~~c--~~~c~~---~C~~~~~C~~~~g~~~C  157 (189)
                       .|.|.|.+||. +..+..     |....      .|..  .-+-.  ...|  ||+|..   +|.+ ++|++..++|+|
T Consensus        73 ~~~~C~C~~G~~~~~~C~~-----C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C  146 (162)
T 1uzk_A           73 SKASCCCSLGKAWGTPCEM-----CPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQC  146 (162)
T ss_dssp             CHHHHHTTTCCEETTTTEE-----CCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEE
T ss_pred             cCceeeCCCCCCcCCCccc-----CCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEe
Confidence             58899999987 433221     11100      0110  00000  0122  688864   5975 799999999999


Q ss_pred             eCCCCCccCCc
Q psy2457         158 SCPAGYQGDAL  168 (189)
Q Consensus       158 ~C~~G~~g~~~  168 (189)
                      .|++||+|...
T Consensus       147 ~C~~Gy~g~~d  157 (162)
T 1uzk_A          147 RCPTGYYLNED  157 (162)
T ss_dssp             ECCTTCCBCTT
T ss_pred             eCCCCccCCCC
Confidence            99999998764

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.14  E-value=4.3e-11  Score=82.66  Aligned_cols=96  Identities=23%  Similarity=0.469  Sum_probs=74.7

Q ss_pred             CCCCCCCccCCCCcccCCCCccccccchhh----CCCCCEEeeCCCCeeeeCCCCCccCCC---------CCCcccCCCC
Q psy2457           5 FPPRPGFEPSPSRLVASPRDYLGIRLSDSQ----CGVNSECNVRNHIPVCSCPPGYTGDPL---------TQCRRFDPHD   71 (189)
Q Consensus         5 ~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~----C~~~~~C~~~~~~~~C~c~~g~~~~~~---------~~c~~~~~~~   71 (189)
                      ..|.+||.+.+..+......|.++++|...    |.+++.|++..++|.|.|++||.+..-         ..|+   +++
T Consensus        21 C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~---did   97 (143)
T 2bou_A           21 CRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ---DVD   97 (143)
T ss_dssp             EEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE---ECC
T ss_pred             EeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcC---Ccc
Confidence            457789987652223345688999999863    887889999999999999999987621         1453   577


Q ss_pred             CCC--CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          72 LCE--PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        72 ~c~--~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                      +|.  ..+|...+.|++     ..++|.|.|++||.+..
T Consensus        98 eC~~~~~~C~~~~~C~n-----~~g~y~C~C~~Gy~g~~  131 (143)
T 2bou_A           98 ECSSGQHQCDSSTVCFN-----TVGSYSCRCRPGWKPRH  131 (143)
T ss_dssp             HHHHTCCCCCTTSEEEE-----CSSCEEEECCSSSCBCT
T ss_pred             CccCcCCCCCCCCEEEC-----CCCCEEeeCCCCcccCC
Confidence            886  378988899998     67889999999998875

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.07  E-value=4.3e-10  Score=76.82  Aligned_cols=86  Identities=26%  Similarity=0.558  Sum_probs=70.8

Q ss_pred             CCCCCCccCCCCcccCCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCee
Q psy2457           6 PPRPGFEPSPSRLVASPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKC   84 (189)
Q Consensus         6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C   84 (189)
                      .|.+||.+.        ....++++|... |.++++|++..++|.|.|++||.+.   .|+  .++++|...+|...+.|
T Consensus        31 ~C~~Gy~G~--------~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~---~C~--~~~~~C~~~~C~~~g~C   97 (135)
T 2vj3_A           31 QCLQGYTGP--------RCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGV---HCE--VNTDECASSPCLHNGRC   97 (135)
T ss_dssp             ECCTTEEST--------TSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESS---SSC--EECCTTTTCCSTTTCEE
T ss_pred             ECCCCCcCC--------cccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCC---cce--ecCCcccCCCcCCCCEe
Confidence            466677542        222478888877 8888999999999999999999998   886  46789988999999999


Q ss_pred             ecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457          85 QPGYDKSGKDRPVCTCLPGYVGDAL  109 (189)
Q Consensus        85 ~~~~~~~~~~~~~c~c~~g~~~~~~  109 (189)
                      ++     ..+.|.|.|++||.|..+
T Consensus        98 ~~-----~~g~~~C~C~~G~~G~~C  117 (135)
T 2vj3_A           98 LD-----KINEFQCECPTGFTGHLC  117 (135)
T ss_dssp             EE-----CSSCEEEECCTTEESSSS
T ss_pred             EC-----CCCCeEEECCCCCcCCcc
Confidence            87     567899999999998763

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=99.04  E-value=2.1e-13  Score=102.43  Aligned_cols=133  Identities=11%  Similarity=0.019  Sum_probs=89.0

Q ss_pred             ccccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCC-----------------------------CCCCC
Q psy2457          27 GIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDL-----------------------------CEPNP   77 (189)
Q Consensus        27 ~~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~-----------------------------c~~~~   77 (189)
                      .+..+..+|.++++|++..++|.|.|+.||.+.   .|+  ..+++                             |...|
T Consensus        32 n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~---~Ce--~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~p  106 (267)
T 4fbr_A           32 NVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGT---LSS--ANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIK  106 (267)
T ss_dssp             CEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE---ECS--TTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEE
T ss_pred             ccccCCCCcCCCCeecCCCCCeEEeCCCCcccc---ccc--ccccccccccCcCCCcccCCCeeeccCccccccccCCCC
Confidence            444443348889999999999999999999987   665  34443                             33345


Q ss_pred             CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCc----CccCCCCCCCCCCCCCccCC-Cee---cCCccccCCCCCEee
Q psy2457          78 CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTY----CRRGECQSDAECNYDQVCNN-YNC---EKACTSQCGINAQCT  149 (189)
Q Consensus        78 c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~----c~~~~c~~~~~c~~~~~c~~-~~c---~~~c~~~C~~~~~C~  149 (189)
                      |.+.++|++     ...+|.|.|+.||.|..+..    |+...+.....|....+++. .+|   ++.+..+|.++++|+
T Consensus       107 C~ngG~C~~-----~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~  181 (267)
T 4fbr_A          107 SNDGGKTLT-----GTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTL  181 (267)
T ss_dssp             CSSTTSEEE-----EEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEE
T ss_pred             CCCCCEEec-----CCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEee
Confidence            667777776     45679999999999987541    11111222223332222221 222   333333899999999


Q ss_pred             eCCCCeeeeCCCCCccCCcc
Q psy2457         150 ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       150 ~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +...+|+|.|++||+|..+.
T Consensus       182 dg~~~y~C~Cp~Gf~G~~c~  201 (267)
T 4fbr_A          182 SGTMTYNGEGPIGFRGTLTS  201 (267)
T ss_dssp             EEEEEETTSCCEEEEEEEEE
T ss_pred             CCCCCeEEeCCCCccccccc
Confidence            99999999999999988763

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.02  E-value=6.9e-10  Score=76.45  Aligned_cols=96  Identities=20%  Similarity=0.457  Sum_probs=74.2

Q ss_pred             CCCCCCCccCCCC----cccCCCCccccccchhh-CCCCCEEe-------eCCCCeeeeCCCCCccCCCCCCcccCCCCC
Q psy2457           5 FPPRPGFEPSPSR----LVASPRDYLGIRLSDSQ-CGVNSECN-------VRNHIPVCSCPPGYTGDPLTQCRRFDPHDL   72 (189)
Q Consensus         5 ~~~~~gf~~~~~~----~~~~~~~c~~~~~c~~~-C~~~~~C~-------~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~   72 (189)
                      ..|.+||.+..=+    ...+...+.++++|... |.++++|+       +..++|.|.|++||.+.   .|+  .++++
T Consensus        25 C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~---~C~--~~i~~   99 (143)
T 4d90_A           25 CECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGI---HCQ--HNINE   99 (143)
T ss_dssp             EECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEEST---TSC--EECCT
T ss_pred             eECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCC---Ccc--cCCCc
Confidence            4577888754211    11223455677888766 98889999       55678999999999998   895  47899


Q ss_pred             CCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCC
Q psy2457          73 CEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALT  110 (189)
Q Consensus        73 c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~  110 (189)
                      |...+|...+.|++     ..+.|.|.|++||.|..+.
T Consensus       100 C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~c~  132 (143)
T 4d90_A          100 CEVEPCKNGGICTD-----LVANYSCECPGEFMGRNCQ  132 (143)
T ss_dssp             TTTCCSCTTCEEEE-----ETTEEEEECCTTCBSTTSC
T ss_pred             CCCCCCCCCCEeEC-----CCCCeEeECCCCCccCCce
Confidence            99999999999987     5678999999999998743

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.99  E-value=5.1e-10  Score=87.25  Aligned_cols=112  Identities=26%  Similarity=0.740  Sum_probs=34.9

Q ss_pred             chhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCC
Q psy2457          31 SDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALT  110 (189)
Q Consensus        31 c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~  110 (189)
                      |...|.+++.|..   .+.|.|.+||.|.   .|+    ...|. .+|.+++.|..        .+.|.|.+||.|..++
T Consensus       183 C~~~C~~~G~C~~---~~~C~C~~G~~G~---~C~----~~~C~-~~C~~~G~C~~--------~~~C~C~~G~~G~~C~  243 (324)
T 2ygq_A          183 CTPRCMNGGLCVT---PGFCICPPGFYGV---NCD----KANCS-TTCFNGGTCFY--------PGKCICPPGLEGEQCE  243 (324)
T ss_dssp             SSSCCCTTCEECS---SCCEECCTTCBTT---TTC----BCCCS-SCCCSSCCBSC--------SSCBCCCTTCCTTTTC
T ss_pred             CCCCCCCCCEEcC---CCEEeCCCCccCC---Ccc----cCcCC-CCCCCCCeeCC--------CCeeeCCCCccCCCCC
Confidence            4333655666654   3457777777766   663    13342 45666666653        2567777777766532


Q ss_pred             cCccCCCCCCCCCCCCCccCC-Cee------------cCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         111 YCRRGECQSDAECNYDQVCNN-YNC------------EKACTSQCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       111 ~c~~~~c~~~~~c~~~~~c~~-~~c------------~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                         ...|.  ..|....+|.+ ++|            ++.|...|.++++|.+   .+.|.|++||+|..+.
T Consensus       244 ---~~~C~--~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~  307 (324)
T 2ygq_A          244 ---ISKCP--QPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE---PNKCQCQEGWHGRHCN  307 (324)
T ss_dssp             ------------------------------------------------------------------------
T ss_pred             ---cCcCC--CcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC---CCEeECCCCCcCCCCC
Confidence               22221  12222222221 222            2444445666677764   3577777777777753

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.98  E-value=4.3e-10  Score=71.57  Aligned_cols=82  Identities=20%  Similarity=0.389  Sum_probs=59.6

Q ss_pred             CeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCC
Q psy2457          47 IPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYD  126 (189)
Q Consensus        47 ~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~  126 (189)
                      +|.|.|.+||.+.   .|+    +++|...||.+           ..+.|.|.|++||.  .   |+.   .++      
T Consensus         1 sy~C~C~~g~~g~---~c~----~~~c~~~pC~n-----------~~~~y~C~C~~G~~--~---C~~---~~~------   48 (91)
T 1tpg_A            1 SYQVICRDEKTQM---IYQ----QHQSWLRPVLR-----------SNRVEYCWCNSGRA--Q---CHS---VPV------   48 (91)
T ss_dssp             CCCCCCBCSSSCC---BCC----SSCEEEEECSS-----------SSCEEEEECSSSCC--B---CCE---ECE------
T ss_pred             CeeeECCCCCcCC---eEC----CCcccCCcccc-----------CCCCcEeECCCCCc--c---ccc---CcC------
Confidence            4789999999988   673    56666555543           33569999999996  2   220   022      


Q ss_pred             CccCCCeecCCccc-cCCCCCEeeeCC--CCeeeeCCCCCccCCcc
Q psy2457         127 QVCNNYNCEKACTS-QCGINAQCTARN--HVATCSCPAGYQGDALS  169 (189)
Q Consensus       127 ~~c~~~~c~~~c~~-~C~~~~~C~~~~--g~~~C~C~~G~~g~~~~  169 (189)
                               ++|.. +|.++++|++..  ++|.|.|++||+|..+.
T Consensus        49 ---------~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   85 (91)
T 1tpg_A           49 ---------KSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   85 (91)
T ss_dssp             ---------EECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             ---------CcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCC
Confidence                     33333 688899999887  89999999999998864

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.95  E-value=1.9e-09  Score=67.20  Aligned_cols=76  Identities=24%  Similarity=0.591  Sum_probs=55.0

Q ss_pred             CCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCC
Q psy2457          68 DPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINA  146 (189)
Q Consensus        68 ~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~  146 (189)
                      .++++|.. .+|.+ +.|++     ..++|.|.|++||.+...      .|.++++|...             .+|.+ +
T Consensus         3 ~dideC~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~~~g~------~C~dideC~~~-------------~~C~~-~   56 (82)
T 1emn_A            3 VDMDECKEPDVCKH-GQCIN-----TDGSYRCECPFGYILAGN------ECVDTDECSVG-------------NPCGN-G   56 (82)
T ss_dssp             CCCCSSSSTTSCSS-SEECC-----CSSCCCEECCTTEEEETT------EEEECCGGGTC-------------CTTSS-S
T ss_pred             CccccCCCCCCcCC-CEEEe-----cCCCEEEECCCCeECCCC------ccCCcccccCC-------------CCCCC-C
Confidence            46788875 78865 79988     667899999999974321      24443333211             15765 6


Q ss_pred             EeeeCCCCeeeeCCCCCccCCcc
Q psy2457         147 QCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|++..++|.|.|++||+|+...
T Consensus        57 ~C~n~~g~y~C~C~~G~~g~~~~   79 (82)
T 1emn_A           57 TCKNVIGGFECTCEEGFEPGPMM   79 (82)
T ss_dssp             CEEECSSSEEECCSSSSCCCSSS
T ss_pred             EeECCCCCEEeECCCCeEeCCCC
Confidence            89999999999999999987643

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.94  E-value=7.1e-10  Score=69.14  Aligned_cols=73  Identities=26%  Similarity=0.581  Sum_probs=59.1

Q ss_pred             ccccccchh-h-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          25 YLGIRLSDS-Q-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        25 c~~~~~c~~-~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      |.++++|.. . |.+ +.|++..++|.|.|++||.+... .|+   ++++|. .++|.+ +.|.+     ..++|.|.|+
T Consensus         2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~-~C~---dideC~~~~~C~~-~~C~n-----~~g~y~C~C~   70 (82)
T 1emn_A            2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGN-ECV---DTDECSVGNPCGN-GTCKN-----VIGGFECTCE   70 (82)
T ss_dssp             CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETT-EEE---ECCGGGTCCTTSS-SCEEE-----CSSSEEECCS
T ss_pred             CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCC-ccC---CcccccCCCCCCC-CEeEC-----CCCCEEeECC
Confidence            678899985 4 864 89999999999999999983221 784   678887 678875 58988     6678999999


Q ss_pred             CCcccCC
Q psy2457         102 PGYVGDA  108 (189)
Q Consensus       102 ~g~~~~~  108 (189)
                      +||.+..
T Consensus        71 ~G~~g~~   77 (82)
T 1emn_A           71 EGFEPGP   77 (82)
T ss_dssp             SSSCCCS
T ss_pred             CCeEeCC
Confidence            9998764

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.92  E-value=8.2e-10  Score=78.33  Aligned_cols=135  Identities=21%  Similarity=0.479  Sum_probs=84.2

Q ss_pred             cCCCCCCCccCCCCcccCCCCccccccchhh--CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCC-C
Q psy2457           4 KFPPRPGFEPSPSRLVASPRDYLGIRLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCG-E   80 (189)
Q Consensus         4 ~~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~-~   80 (189)
                      ...|.+||.+.     .    |..  .|...  |..+++|..   ...|.|.+||.+.   .|+    ...|. ..|. .
T Consensus        18 ~c~C~~g~~G~-----~----C~~--~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~---~C~----~~~C~-~~C~~~   75 (169)
T 2vj2_A           18 AVTCDDYYYGF-----G----CNK--FCRPRDDFFGHYACDQ---NGNKTCMEGWMGP---ECN----RAICR-QGCSPK   75 (169)
T ss_dssp             ---CCTTEETT-----T----TCE--ECCCEEETTEEEEECS---SCCEEECTTEEST---TSC----EECCC-TTCCTT
T ss_pred             eeeCCCcCcCC-----C----ccc--ccCCCCCcCCCCEeCC---CCeeECCCCCcCC---CCC----CCCCC-CCCCCC
Confidence            45688888765     1    221  23322  555567753   3479999999988   784    23453 3454 4


Q ss_pred             CCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCC-CCCCCCCCCCCcc--CC----Cee---cCCccc--cCCCCCEe
Q psy2457          81 NAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGE-CQSDAECNYDQVC--NN----YNC---EKACTS--QCGINAQC  148 (189)
Q Consensus        81 ~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~-c~~~~~c~~~~~c--~~----~~c---~~~c~~--~C~~~~~C  148 (189)
                      .+.|..        .+.|.|.+||.|..+++|...+ |.+. .|....+|  ..    ..|   +++|..  +|.++++|
T Consensus        76 ~g~C~~--------~~~C~C~~G~~G~~C~~C~~~~~C~~g-~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C  146 (169)
T 2vj2_A           76 HGSCKL--------PGDCRCQYGWQGLYCDKCIPHPGCVHG-ICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTC  146 (169)
T ss_dssp             TEECSS--------TTCCEECTTEESSSSCEECCCTTCSSE-ECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEE
T ss_pred             CcccCC--------CCeeECCCCCCCCCcccCCCCCCCCCC-CcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEE
Confidence            456754        4789999999998876554333 4432 33321111  11    112   566753  79999999


Q ss_pred             eeC-CCCeeeeCCCCCccCCcc
Q psy2457         149 TAR-NHVATCSCPAGYQGDALS  169 (189)
Q Consensus       149 ~~~-~g~~~C~C~~G~~g~~~~  169 (189)
                      ++. .++|.|.|++||+|..+.
T Consensus       147 ~~~~~~~~~C~C~~G~~G~~Ce  168 (169)
T 2vj2_A          147 SNTGPDKYQCSCPEGYSGPNCE  168 (169)
T ss_dssp             EECSTTCEEEECCTTCCSTTSC
T ss_pred             cCCCCCCcEeECCCCCcCcCcC
Confidence            996 789999999999998853

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.90  E-value=1.8e-10  Score=79.81  Aligned_cols=115  Identities=24%  Similarity=0.435  Sum_probs=68.4

Q ss_pred             cccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCC---------CCCC--CCCCCCCeeecCCCCCC
Q psy2457          26 LGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHD---------LCEP--NPCGENAKCQPGYDKSG   92 (189)
Q Consensus        26 ~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~---------~c~~--~~c~~~~~C~~~~~~~~   92 (189)
                      .++++|... |.+ ++|++..++|+|.|++||.+... ..|.. ....         .|..  ..|.....|.+     .
T Consensus         2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~-~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~-----~   74 (147)
T 2w86_A            2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKTICIE-TIKGTCWQTVIDGRCEININGATLKSQCCS-----S   74 (147)
T ss_dssp             CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSSBEEE-CCCEEEEEEEETTEEEEEEEEEECHHHHHT-----T
T ss_pred             CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCCeecC-CCCCcccCCCCCCccccCCCccccCCcccc-----C
Confidence            467888876 875 79999999999999999997621 12320 0000         0100  00100001111     1


Q ss_pred             CC----------CCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc---cCCCCCEeeeCCCCeeeeC
Q psy2457          93 KD----------RPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS---QCGINAQCTARNHVATCSC  159 (189)
Q Consensus        93 ~~----------~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~---~C~~~~~C~~~~g~~~C~C  159 (189)
                      .+          .+.|.|++||.+..-     ..|.+               ||+|..   +|.+ ++|++..++|+|.|
T Consensus        75 ~g~~~g~~C~~c~~~C~C~~Gy~~~~g-----~~C~d---------------ideC~~~~~~C~~-g~C~n~~g~y~C~C  133 (147)
T 2w86_A           75 LGAAWGSPCTLCQVDPICGKGYSRIKG-----TQCED---------------IDECEVFPGVCKN-GLCVNTRGSFKCQC  133 (147)
T ss_dssp             TCSEETTTTEECCCCTTTCTTEEEEET-----TEEEE---------------CCHHHHSTTCSSS-SEEEEETTEEEEEC
T ss_pred             cCcccCCCcccCCCcccCCCccccCCC-----CccCc---------------cccccCCCCCCCC-CEEECCCCCEEeeC
Confidence            11          156788888853110     11333               344543   4875 59999999999999


Q ss_pred             CCCCccCCc
Q psy2457         160 PAGYQGDAL  168 (189)
Q Consensus       160 ~~G~~g~~~  168 (189)
                      ++||+|+..
T Consensus       134 ~~Gy~g~~~  142 (147)
T 2w86_A          134 PSGMTLDAT  142 (147)
T ss_dssp             CTTCCBCTT
T ss_pred             CCCCccCCC
Confidence            999997764

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.82  E-value=6.4e-09  Score=87.16  Aligned_cols=88  Identities=26%  Similarity=0.515  Sum_probs=70.2

Q ss_pred             CCCCCCccCCCCcccCCCCccccccchhh---CCCCC---EEeeCCCCeeee-CCCCCccCCC------------CCCcc
Q psy2457           6 PPRPGFEPSPSRLVASPRDYLGIRLSDSQ---CGVNS---ECNVRNHIPVCS-CPPGYTGDPL------------TQCRR   66 (189)
Q Consensus         6 ~~~~gf~~~~~~~~~~~~~c~~~~~c~~~---C~~~~---~C~~~~~~~~C~-c~~g~~~~~~------------~~c~~   66 (189)
                      .|.+||.+       .+..|.++++|...   |.+++   +|++..++|.|. |++||.+...            ..|  
T Consensus        29 ~C~~GytG-------dg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C--   99 (634)
T 1yo8_A           29 FCPVGFLG-------NGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVC--   99 (634)
T ss_dssp             CCCTTBCS-------CSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCE--
T ss_pred             cCCCccCC-------CCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcc--
Confidence            67788863       34678999999865   98888   899999999998 9999997721            125  


Q ss_pred             cCCCCCCCC--CCCCCCCeeecCCCCCCC----CCCeeeCCCCcccCC
Q psy2457          67 FDPHDLCEP--NPCGENAKCQPGYDKSGK----DRPVCTCLPGYVGDA  108 (189)
Q Consensus        67 ~~~~~~c~~--~~c~~~~~C~~~~~~~~~----~~~~c~c~~g~~~~~  108 (189)
                       ..+++|..  .+|...+.|++     ..    ++|.|.|++||.+..
T Consensus       100 -~dideC~~~~~pC~~~~~Cvn-----t~~~~~GsY~C~C~~Gy~GdG  141 (634)
T 1yo8_A          100 -EPENPCKDKTHNCHKHAECIY-----LGHFSDPMYKCECQTGYAGDG  141 (634)
T ss_dssp             -EECCTTTTTCCCCCTTEEEEE-----CCTTCSSSEEEEECTTEEESS
T ss_pred             -cccccccCCCcccccCccccc-----cccccccceeeeccCCccccC
Confidence             35788974  58998899998     44    789999999999854

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.80  E-value=5.9e-09  Score=72.08  Aligned_cols=70  Identities=21%  Similarity=0.577  Sum_probs=53.8

Q ss_pred             Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCC--CCCCCCee-ecCCCCCCCCCCeee
Q psy2457          24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPN--PCGENAKC-QPGYDKSGKDRPVCT   99 (189)
Q Consensus        24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~--~c~~~~~C-~~~~~~~~~~~~~c~   99 (189)
                      .|.++++|... |.++++|++..++|.|.|++||.|.   .|+   .+++|...  +|..  .| .+     ..++|.|.
T Consensus        44 ~c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~---~~deC~~~~~~C~~--~C~~n-----~~g~y~C~  110 (146)
T 1x7a_L           44 QYVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGK---NCE---LDATCNIKNGRCKQ--FCKTG-----ADSKVLCS  110 (146)
T ss_dssp             ------CCSSCSSCTTCEEEECSSCEEEECCSSEEST---TTC---EECCTTSGGGSCSS--BCCCC-----SSSCCCCB
T ss_pred             cCCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCC---cCC---CCccccCCCCCCcC--CCCCC-----CCCCEEeE
Confidence            58899999877 9999999999999999999999998   895   45888754  4544  78 76     56789999


Q ss_pred             CCCCccc
Q psy2457         100 CLPGYVG  106 (189)
Q Consensus       100 c~~g~~~  106 (189)
                      |++||.+
T Consensus       111 C~~Gy~l  117 (146)
T 1x7a_L          111 CTTGYRL  117 (146)
T ss_dssp             CCTTEEE
T ss_pred             cCCCcEe
Confidence            9999984

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.79  E-value=9.1e-09  Score=80.20  Aligned_cols=108  Identities=31%  Similarity=0.823  Sum_probs=51.4

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCcc
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRR  114 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~  114 (189)
                      |.+++.|..   .+.|.|.+||.|.   .|+    .+.|. .+|.+++.|..        .+.|.|.+||.|..++   .
T Consensus       155 C~~~G~C~~---~~~C~C~~G~~G~---~C~----~~~C~-~~C~~~G~C~~--------~~~C~C~~G~~G~~C~---~  212 (324)
T 2ygq_A          155 CRNGGFCNE---RRICECPDGFHGP---HCE----KALCT-PRCMNGGLCVT--------PGFCICPPGFYGVNCD---K  212 (324)
T ss_dssp             CCSSCEECT---TSCEECCTTEESS---SSC----EESSS-SCCCTTCEECS--------SCCEECCTTCBTTTTC---B
T ss_pred             CCCCCEECC---CCeEECCCCCcCC---CCC----CCCCC-CCCCCCCEEcC--------CCEEeCCCCccCCCcc---c
Confidence            778888864   4789999999998   885    24564 57888899975        4789999999998743   2


Q ss_pred             CCCCCCCCCCCCCccCC-Cee------------cCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         115 GECQSDAECNYDQVCNN-YNC------------EKACTSQCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       115 ~~c~~~~~c~~~~~c~~-~~c------------~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      ..|.  ..|..+.+|.+ ++|            +++|..+|.++++|..   .+.|.|++||+|..+.
T Consensus       213 ~~C~--~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~---~~~C~C~~G~~G~~C~  275 (324)
T 2ygq_A          213 ANCS--TTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG---KSKCKCSKGYQGDLCS  275 (324)
T ss_dssp             CCCS--SCCCSSCCBSCSSCBCCCTTCCTTTTC-----------------------------------
T ss_pred             CcCC--CCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC---CCEEECCCCCcCCCCc
Confidence            2232  13333333332 333            3455557888889974   4789999999998864

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.78  E-value=1e-09  Score=79.22  Aligned_cols=70  Identities=24%  Similarity=0.652  Sum_probs=22.0

Q ss_pred             Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC-CCCCCC--CCCCCCeeecCCCCCCCCCCeee
Q psy2457          24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH-DLCEPN--PCGENAKCQPGYDKSGKDRPVCT   99 (189)
Q Consensus        24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~   99 (189)
                      .|.++++|... |.++++|++..++|.|.|++||.|.   .|+  ..+ ++|...  +|..  .|.+     ..++|.|.
T Consensus        38 ~c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~---~Ce--~~i~deC~~~~~~C~~--~C~n-----~~gsy~C~  105 (195)
T 1nfu_B           38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCE--LFTRKLCSLDNGDCDQ--FCHE-----EQNSVVCS  105 (195)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEE-----ETTEEEEE
T ss_pred             cCCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceec---ccc--ccccccccCCCCCCCC--EeEC-----CCCCeEEE
Confidence            48899999877 9998999999999999999999998   896  345 778753  4654  8987     56789999


Q ss_pred             CCCCcc
Q psy2457         100 CLPGYV  105 (189)
Q Consensus       100 c~~g~~  105 (189)
                      |++||.
T Consensus       106 C~~Gy~  111 (195)
T 1nfu_B          106 CARGYT  111 (195)
T ss_dssp             CCTTEE
T ss_pred             CCCCce
Confidence            999998

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.78  E-value=6.1e-09  Score=72.00  Aligned_cols=83  Identities=34%  Similarity=0.733  Sum_probs=57.2

Q ss_pred             CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCE
Q psy2457          68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQ  147 (189)
Q Consensus        68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~  147 (189)
                      .++++|..+||.++++|++     ..++|.|.|++||.|..        |.++++|....            ..|.+  +
T Consensus        46 ~dideC~~~pC~n~g~C~~-----~~~~y~C~C~~G~~G~~--------C~~~deC~~~~------------~~C~~--~   98 (146)
T 1x7a_L           46 VDGDQCEPNPCLNGGLCKD-----DINSYECWCQVGFEGKN--------CELDATCNIKN------------GRCKQ--F   98 (146)
T ss_dssp             ----CCSSCSSCTTCEEEE-----CSSCEEEECCSSEESTT--------TCEECCTTSGG------------GSCSS--B
T ss_pred             CCcCcCCCCCCCCCCEeEC-----CCCCEEEecCCCCcCCc--------CCCCccccCCC------------CCCcC--C
Confidence            4788999999999999998     56789999999999875        33333343210            03554  7


Q ss_pred             e-eeCCCCeeeeCCCCCccCCc-ccCeecCCc
Q psy2457         148 C-TARNHVATCSCPAGYQGDAL-SRCYPAETT  177 (189)
Q Consensus       148 C-~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~  177 (189)
                      | ++..++|.|.|++||++... ..|.++..+
T Consensus        99 C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L           99 CKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             CCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred             CCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence            9 88999999999999993221 237776554

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.77  E-value=5.8e-09  Score=65.57  Aligned_cols=75  Identities=25%  Similarity=0.608  Sum_probs=52.7

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-c--CC
Q psy2457          69 PHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-Q--CG  143 (189)
Q Consensus        69 ~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~--C~  143 (189)
                      ++++|...+  |.+ +.|++     ..++|.|.|++||.+....   ...|.+               +|+|.. +  |.
T Consensus         2 dideC~~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~~~~~~---g~~C~d---------------ideC~~~~~~C~   57 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVN-----TPGDFECKCDEGYESGFMM---MKNCMD---------------IDECQRDPLLCR   57 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEE-----ETTEEEECCCSSEEECTTT---SSSEEE---------------CCHHHHCSSTTT
T ss_pred             ccccccCCCCCCCC-CEEEC-----CCCCEEeeCCCCcCccCCC---CCccCC---------------cccccCCCCcCC
Confidence            467887655  854 48988     6678999999999854210   012334               344543 3  65


Q ss_pred             CCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         144 INAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       144 ~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                       +++|++..++|.|.|++||++...
T Consensus        58 -~~~C~n~~g~y~C~C~~G~~~~~~   81 (86)
T 1lmj_A           58 -GGVCHNTEGSYRCECPPGHQLSPN   81 (86)
T ss_dssp             -TSEEEEETTEEEEESCTTSCCCSS
T ss_pred             -CCEeEcCCCCEEEECcCCcccCCC
Confidence             479999999999999999997653

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.76  E-value=1.9e-08  Score=66.56  Aligned_cols=86  Identities=27%  Similarity=0.505  Sum_probs=56.8

Q ss_pred             CCCCCCCCC--------CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc
Q psy2457          69 PHDLCEPNP--------CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS  140 (189)
Q Consensus        69 ~~~~c~~~~--------c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~  140 (189)
                      ++++|...|        |.++++|++     ..++|.|.|++||.|..+....     +.++|....            .
T Consensus         5 d~d~C~~~p~~~~C~~~C~~~g~C~~-----~~~~y~C~C~~G~~G~~C~~~~-----~~~~C~~~~------------~   62 (114)
T 1aut_L            5 DGDQCLVLPLEHPCASLCCGHGTCID-----GIGSFSCDCRSGWEGRFCQREV-----SFLNCSLDN------------G   62 (114)
T ss_dssp             ---CCCCCSSCCSSSSTTTTSEEECC-----CSSCCCEEECTTEESTTSCEEC-----CSSSSSSGG------------G
T ss_pred             ecccccCCCccccccccCCCcCCCCC-----CCCCcEeeCCCCCcCCCcCcCC-----cCCcCcCCC------------C
Confidence            456777666        888899987     5678999999999988633100     011222100            0


Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDAL-SRCYPAETTS  178 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~~  178 (189)
                      .|..  +|++..++|.|.|++||++... .+|.++..++
T Consensus        63 ~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~~~p   99 (114)
T 1aut_L           63 GCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFP   99 (114)
T ss_dssp             GCSS--EEEECSSSEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CCCC--EeECCCCCEEeECCCCeeECCCCCccCcCcccC
Confidence            3543  8999999999999999996543 4477766654

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.74  E-value=2.2e-08  Score=84.99  Aligned_cols=123  Identities=28%  Similarity=0.670  Sum_probs=86.3

Q ss_pred             cchhh-CCCCCEEeeCCCCee---eeCCCCCccCCCCCCcccCCC--------CCCCC----CCCCCCCeeecCCCCCCC
Q psy2457          30 LSDSQ-CGVNSECNVRNHIPV---CSCPPGYTGDPLTQCRRFDPH--------DLCEP----NPCGENAKCQPGYDKSGK   93 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~~~~~~---C~c~~g~~~~~~~~c~~~~~~--------~~c~~----~~c~~~~~C~~~~~~~~~   93 (189)
                      +|... |.+.+.|.+..|.+.   |.|.+||.|.   .|+  ..+        +.|..    .+|.+.+.|..       
T Consensus       436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~---~Ce--~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-------  503 (690)
T 3fcs_B          436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGS---QCE--CSEEDYRPSQQDECSPREGQPVCSQRGECLC-------  503 (690)
T ss_dssp             GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSS---SSC--CSCC------CCCCSSSSSSCGGGGSEEECS-------
T ss_pred             CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCC---cee--eccCccCCccCCcCCCCCCCCCCCCCCEEEC-------
Confidence            45444 666677776666676   9999999999   885  333        55764    34777888864       


Q ss_pred             CCCeeeCC----CCcccCCCCcCccCCCCC--CCCCCCCCccCCCee----------------cCCccc----cCCCCCE
Q psy2457          94 DRPVCTCL----PGYVGDALTYCRRGECQS--DAECNYDQVCNNYNC----------------EKACTS----QCGINAQ  147 (189)
Q Consensus        94 ~~~~c~c~----~g~~~~~~~~c~~~~c~~--~~~c~~~~~c~~~~c----------------~~~c~~----~C~~~~~  147 (189)
                        +.|.|.    +||.|..++ +....|..  ...|..+.+|.++.|                +++|..    +|.++|+
T Consensus       504 --g~C~C~~~~~~Gy~G~~Ce-~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~  580 (690)
T 3fcs_B          504 --GQCVCHSSDFGKITGKYCE-CDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGK  580 (690)
T ss_dssp             --SSEEECCCSSCCCBSTTSC-BCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCE
T ss_pred             --CeeEeecCCCCCeeCCCcC-cccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCE
Confidence              689999    999998864 23345552  234655666666665                345652    5888999


Q ss_pred             eeeCCCCeeeeC-CCCCccCCcccC
Q psy2457         148 CTARNHVATCSC-PAGYQGDALSRC  171 (189)
Q Consensus       148 C~~~~g~~~C~C-~~G~~g~~~~~c  171 (189)
                      |.+.    .|.| ++||+|..|..|
T Consensus       581 C~~g----~C~C~~~Gy~G~~Ce~C  601 (690)
T 3fcs_B          581 CECG----SCVCIQPGSYGDTCEKC  601 (690)
T ss_dssp             EETT----EEECCSTTCBSTTSCBC
T ss_pred             EeCC----EEECCCCCccCCCcCcC
Confidence            9752    8999 999999998643

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=98.71  E-value=4.9e-11  Score=89.58  Aligned_cols=135  Identities=11%  Similarity=-0.001  Sum_probs=87.8

Q ss_pred             CCCCccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCC------CCC------------------
Q psy2457          21 SPRDYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDL------CEP------------------   75 (189)
Q Consensus        21 ~~~~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~------c~~------------------   75 (189)
                      .+..|...++|+.. |.+.++|++...+|.|.|+.||++.   .|+  ..+++      +..                  
T Consensus        92 ~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~---~Ce--~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~  166 (267)
T 4fbr_A           92 LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSE---VTD--GDTYSVENQWGGSAAPWHSGGVWVLGTRGKQN  166 (267)
T ss_dssp             CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEE---ECC--CCEEEEEEECSSTTSCCEEEEEEECCSSTTSC
T ss_pred             ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCcccc---CCC--CCcccccccCCcCCccccCCcceecccccccc
Confidence            34567777788877 9999999999899999999999987   665  33333      222                  


Q ss_pred             -----CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCC-----CCCCCCCCCc----cCCCeecCCcccc
Q psy2457          76 -----NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQ-----SDAECNYDQV----CNNYNCEKACTSQ  141 (189)
Q Consensus        76 -----~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~-----~~~~c~~~~~----c~~~~c~~~c~~~  141 (189)
                           .+|.+.++|++     ...+|+|.|++||.|..+.. .++.|.     ....|.....    |....-++.|..+
T Consensus       167 i~c~~~~c~ngg~C~d-----g~~~y~C~Cp~Gf~G~~c~~-~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~  240 (267)
T 4fbr_A          167 VINVDAKSNDGGKTLS-----GTMTYNGEGPIGFRGTLTSP-DTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVA  240 (267)
T ss_dssp             EEEEEEECSSTTSEEE-----EEEEETTSCCEEEEEEEEET-TEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEE
T ss_pred             cccCCCCCCCCCEeeC-----CCCCeEEeCCCCcccccccc-ccceeccCCCccCCcccCCCeEEEecCCCCccccCCcC
Confidence                 23556667765     45679999999999876321 011111     1111111110    0001113344447


Q ss_pred             CCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         142 CGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       142 C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                      |.++++|++...+|.|.||+||+|.
T Consensus       241 c~ngGtC~dg~~sy~CeCp~GF~G~  265 (267)
T 4fbr_A          241 SSDGGKTLAGTMIYNGEGPIGFRAR  265 (267)
T ss_dssp             CSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred             CCCCCEeeCCCcceeecCCCCcccc
Confidence            9999999998899999999999874

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.70  E-value=1.5e-08  Score=69.75  Aligned_cols=73  Identities=21%  Similarity=0.433  Sum_probs=56.7

Q ss_pred             Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCC---eeecCCCCCCCC-CCee
Q psy2457          24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENA---KCQPGYDKSGKD-RPVC   98 (189)
Q Consensus        24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~---~C~~~~~~~~~~-~~~c   98 (189)
                      .+.++++|... |.++++|++..++|.|.|++||.|.   .|+  ..++++...++..++   .|.+     ..+ +|.|
T Consensus        43 ~c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~---~C~--~~~~~c~~c~~~~~~C~~~C~~-----~~g~~y~C  112 (142)
T 2c4f_L           43 SYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR---NCE--THKDDQLICVNENGGCEQYCSD-----HTGTKRSC  112 (142)
T ss_dssp             HHTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST---TSC--EEGGGCCSTTTGGGGCSSEEEC-----CTTSCCEE
T ss_pred             cCCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCC---ccc--cCccccccccCCCCCccCEeEC-----CCCCCEEE
Confidence            36788999877 9999999999999999999999998   885  234554333333333   7887     556 8999


Q ss_pred             eCCCCccc
Q psy2457          99 TCLPGYVG  106 (189)
Q Consensus        99 ~c~~g~~~  106 (189)
                      .|++||.+
T Consensus       113 ~C~~Gy~l  120 (142)
T 2c4f_L          113 RCHEGYSL  120 (142)
T ss_dssp             ECCTTEEE
T ss_pred             ECCCCceE
Confidence            99999983

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.69  E-value=1.7e-08  Score=63.54  Aligned_cols=69  Identities=26%  Similarity=0.625  Sum_probs=48.9

Q ss_pred             CCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCC
Q psy2457          69 PHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGIN  145 (189)
Q Consensus        69 ~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~  145 (189)
                      ++++|...+  | ..+.|.+     ..++|.|.|++||.+....    ..|.+               +|+|.. +|.  
T Consensus         2 dideC~~~~~~C-~~~~C~n-----~~g~y~C~C~~G~~~~~~g----~~C~d---------------ideC~~~~C~--   54 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKN-----IPGDFECECPEGYRYNLKS----KSCED---------------IDECSENMCA--   54 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCC-----BTTBCCCSSSTTCEEETTT----TEEEC---------------CCHHHHSCCS--
T ss_pred             ccccccCCCCCC-CCCEeEC-----CCCCEEEECCCCceECCCC----CcCCC---------------cCeeCCCCCC--
Confidence            467787666  7 6678987     6678999999999854210    12334               344544 686  


Q ss_pred             CEeeeCCCCeeeeCC--CCCc
Q psy2457         146 AQCTARNHVATCSCP--AGYQ  164 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~--~G~~  164 (189)
                      ++|++..++|.|.|+  .||.
T Consensus        55 ~~C~n~~g~y~C~C~g~~G~~   75 (87)
T 1z6c_A           55 QLCVNYPGGYTCYCDGKKGFK   75 (87)
T ss_dssp             SEECCCSSSCCEECCSSSCCB
T ss_pred             CEEEccCCCEEEECCCCcCCc
Confidence            689999999999995  5665

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.67  E-value=3.7e-09  Score=72.07  Aligned_cols=71  Identities=24%  Similarity=0.622  Sum_probs=21.9

Q ss_pred             Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC-CCCCCC--CCCCCCeeecCCCCCCCCCCeee
Q psy2457          24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH-DLCEPN--PCGENAKCQPGYDKSGKDRPVCT   99 (189)
Q Consensus        24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~   99 (189)
                      .|.++++|... |.++++|++..++|.|.|++||.|.   .|+  ..+ ++|...  +|..  .|.+     ..++|.|.
T Consensus        38 ~c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~---~C~--~~i~d~C~~~~~~C~~--~C~~-----~~g~y~C~  105 (134)
T 2vh0_B           38 KYKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCE--LFTRKLCSLDNGDCDQ--FCHE-----EQNSVVCS  105 (134)
T ss_dssp             ------------------------------------------------CCGGGTGGGGCSS--EEEE-----ETTEEEEE
T ss_pred             cCCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCC---ccc--cCCCCccccCCCCCCC--EeEC-----CCCCEEEE
Confidence            48899999877 9988999999999999999999988   896  335 678653  4554  8887     56789999


Q ss_pred             CCCCccc
Q psy2457         100 CLPGYVG  106 (189)
Q Consensus       100 c~~g~~~  106 (189)
                      |++||.+
T Consensus       106 C~~Gy~l  112 (134)
T 2vh0_B          106 CARGYTL  112 (134)
T ss_dssp             CCTTEEE
T ss_pred             CCCCcEE
Confidence            9999983

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.65  E-value=4.9e-09  Score=65.91  Aligned_cols=72  Identities=25%  Similarity=0.574  Sum_probs=55.2

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCC--CCCCcccCCCCCCCCCC--CCCCCeeecCCCCCCCCCCeee
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDP--LTQCRRFDPHDLCEPNP--CGENAKCQPGYDKSGKDRPVCT   99 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~--~~~c~~~~~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~   99 (189)
                      ++++|...   |.+ +.|++..++|.|.|++||.+..  ...|+   ++++|...+  |. .+.|.+     ..++|.|.
T Consensus         2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~---dideC~~~~~~C~-~~~C~n-----~~g~y~C~   71 (86)
T 1lmj_A            2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM---DIDECQRDPLLCR-GGVCHN-----TEGSYRCE   71 (86)
T ss_dssp             CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE---ECCHHHHCSSTTT-TSEEEE-----ETTEEEEE
T ss_pred             ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC---CcccccCCCCcCC-CCEeEc-----CCCCEEEE
Confidence            56777653   754 5999999999999999998431  11684   678887655  54 479998     66889999


Q ss_pred             CCCCcccCC
Q psy2457         100 CLPGYVGDA  108 (189)
Q Consensus       100 c~~g~~~~~  108 (189)
                      |++||.+..
T Consensus        72 C~~G~~~~~   80 (86)
T 1lmj_A           72 CPPGHQLSP   80 (86)
T ss_dssp             SCTTSCCCS
T ss_pred             CcCCcccCC
Confidence            999998764

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.65  E-value=6.8e-08  Score=74.95  Aligned_cols=83  Identities=33%  Similarity=0.726  Sum_probs=60.9

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCC-CCCCCCCCCccCCCeecCCccccCCCCCE
Q psy2457          69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQ-SDAECNYDQVCNNYNCEKACTSQCGINAQ  147 (189)
Q Consensus        69 ~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~-~~~~c~~~~~c~~~~c~~~c~~~C~~~~~  147 (189)
                      ++++|..+||.+++.|.+     ..+.|.|.|++||.|..        |. ++++|....           ..+|.+  .
T Consensus         4 d~~~C~~~pC~~~g~C~~-----~~~~~~C~C~~g~~g~~--------C~~~~~eC~~~~-----------~~~C~~--~   57 (317)
T 3h5c_B            4 GGSPCISQPCLHNGSCQD-----SIWGYTCTCSPGYEGSN--------CELAKNECHPER-----------TDGCQH--F   57 (317)
T ss_dssp             --CCTTSCCCTTTCCCCC-----CSSSCCCCCSSSCCSSS--------SCCCSSSCCTTC-----------TTSCSS--E
T ss_pred             cCCcCCCCCCCCCCEeEC-----CCCCeEEECCCCCcCCc--------cccCcccCCCCC-----------CCCCcC--c
Confidence            467888899999999987     55779999999999875        33 444443210           014765  8


Q ss_pred             eeeCCCCeeeeCCCCCccCCc-ccCeecCCc
Q psy2457         148 CTARNHVATCSCPAGYQGDAL-SRCYPAETT  177 (189)
Q Consensus       148 C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~  177 (189)
                      |++..++|.|.|++||.+... .+|.++..+
T Consensus        58 C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c   88 (317)
T 3h5c_B           58 CLPGQESYTCSCAQGYRLGEDHKQCVPHDQC   88 (317)
T ss_dssp             EECCSSSCEEECCTTEECCTTSSCCEECSSC
T ss_pred             cccCCCeeEEecccccccccccccccccccc
Confidence            999999999999999997543 568887665

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.61  E-value=7.6e-08  Score=74.68  Aligned_cols=71  Identities=32%  Similarity=0.717  Sum_probs=58.9

Q ss_pred             cccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCC---CCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          26 LGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEP---NPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        26 ~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      .|+++|... |.+++.|.+..++|.|.|++||.+.   .|+  .++++|..   .+|.+  .|.+     ..++|.|.|.
T Consensus         3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~---~C~--~~~~eC~~~~~~~C~~--~C~~-----~~g~~~C~C~   70 (317)
T 3h5c_B            3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGS---NCE--LAKNECHPERTDGCQH--FCLP-----GQESYTCSCA   70 (317)
T ss_dssp             ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSS---SSC--CCSSSCCTTCTTSCSS--EEEC-----CSSSCEEECC
T ss_pred             ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCC---ccc--cCcccCCCCCCCCCcC--cccc-----CCCeeEEecc
Confidence            467888777 9888999999899999999999998   896  58899986   67876  8988     6688999999


Q ss_pred             CCcccCC
Q psy2457         102 PGYVGDA  108 (189)
Q Consensus       102 ~g~~~~~  108 (189)
                      +||.+..
T Consensus        71 ~g~~~~~   77 (317)
T 3h5c_B           71 QGYRLGE   77 (317)
T ss_dssp             TTEECCT
T ss_pred             ccccccc
Confidence            9998754

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=98.60  E-value=2e-08  Score=72.47  Aligned_cols=83  Identities=31%  Similarity=0.776  Sum_probs=26.6

Q ss_pred             CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCC-C-CCCCCCCccCCCeecCCccccCCCC
Q psy2457          68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQS-D-AECNYDQVCNNYNCEKACTSQCGIN  145 (189)
Q Consensus        68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~-~-~~c~~~~~c~~~~c~~~c~~~C~~~  145 (189)
                      .++++|..+||.+++.|.+     ..++|.|.|++||.|..        |.. + ++|....            ..|.+ 
T Consensus        40 ~dideC~~~pC~ngg~C~n-----~~g~y~C~C~~Gf~G~~--------Ce~~i~deC~~~~------------~~C~~-   93 (195)
T 1nfu_B           40 KDGDQCETSPCQNQGKCKD-----GLGEYTCTCLEGFEGKN--------CELFTRKLCSLDN------------GDCDQ-   93 (195)
T ss_dssp             ------------------------------------------------------CCGGGTGG------------GGCSS-
T ss_pred             CCCcccCCCCCCCCCEeEC-----CCCCeeEeCCCCceecc--------ccccccccccCCC------------CCCCC-
Confidence            4688999999999999987     56789999999999875        332 2 2332110            14664 


Q ss_pred             CEeeeCCCCeeeeCCCCCccCC-cccCeecCCc
Q psy2457         146 AQCTARNHVATCSCPAGYQGDA-LSRCYPAETT  177 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~~G~~g~~-~~~c~~~~~~  177 (189)
                       +|++..++|.|.|++||++.. -..|.++..+
T Consensus        94 -~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~~~  125 (195)
T 1nfu_B           94 -FCHEEQNSVVCSCARGYTLADNGKACIPTGPY  125 (195)
T ss_dssp             -EEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred             -EeECCCCCeEEECCCCceeCCCCCccccCCCC
Confidence             899999999999999999221 1236666543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=98.55  E-value=5.1e-08  Score=67.04  Aligned_cols=87  Identities=23%  Similarity=0.570  Sum_probs=58.2

Q ss_pred             CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCC
Q psy2457          68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINA  146 (189)
Q Consensus        68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~  146 (189)
                      .++++|..+||.++++|++     ..++|.|.|++||.|..+.. .++.|..   |.             +.. .|..  
T Consensus        45 ~did~C~~~pC~n~g~C~~-----~~g~y~C~C~~G~~G~~C~~-~~~~c~~---c~-------------~~~~~C~~--  100 (142)
T 2c4f_L           45 SDGDQCASSPCQNGGSCKD-----QLQSYICFCLPAFEGRNCET-HKDDQLI---CV-------------NENGGCEQ--  100 (142)
T ss_dssp             TTCCGGGGCCCCTTCEEEE-----ETTEEEEECCTTEESTTSCE-EGGGCCS---TT-------------TGGGGCSS--
T ss_pred             CccCcCcCCCcCCCCEEeC-----CCCCEEeeCCCCccCCcccc-Ccccccc---cc-------------CCCCCccC--
Confidence            4678888899999999988     56789999999999876321 0011110   11             001 2432  


Q ss_pred             EeeeCCC-CeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457         147 QCTARNH-VATCSCPAGYQGDAL-SRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~g-~~~C~C~~G~~g~~~-~~c~~~~~~~  178 (189)
                      +|++..+ +|.|.|++||++... ..|.++..++
T Consensus       101 ~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e~p  134 (142)
T 2c4f_L          101 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP  134 (142)
T ss_dssp             EEECCTTSCCEEECCTTEEECTTSSCEEESSSSC
T ss_pred             EeECCCCCCEEEECCCCceECCCCCCCCCCCccC
Confidence            8999999 999999999993221 2377766543

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=98.54  E-value=3.6e-08  Score=67.11  Aligned_cols=84  Identities=31%  Similarity=0.774  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCC-C-CCCCCCCccCCCeecCCccccCCCC
Q psy2457          68 DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQS-D-AECNYDQVCNNYNCEKACTSQCGIN  145 (189)
Q Consensus        68 ~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~-~-~~c~~~~~c~~~~c~~~c~~~C~~~  145 (189)
                      .++++|..+||.++++|++     ..++|.|.|++||.|..        |.. + ++|....            ..|.+ 
T Consensus        40 ~d~d~C~~~pC~n~g~C~~-----~~~~y~C~C~~G~~G~~--------C~~~i~d~C~~~~------------~~C~~-   93 (134)
T 2vh0_B           40 KDGDQCETSPCQNQGKCKD-----GLGEYTCTCLEGFEGKN--------CELFTRKLCSLDN------------GDCDQ-   93 (134)
T ss_dssp             ------------------------------------------------------CCGGGTGG------------GGCSS-
T ss_pred             CCcCcCCCCCCCCcCCccc-----CCCCEEeeCCCCccCCc--------cccCCCCccccCC------------CCCCC-
Confidence            4678898899999899987     55789999999999875        322 2 2332110            14654 


Q ss_pred             CEeeeCCCCeeeeCCCCCccCCc-ccCeecCCcc
Q psy2457         146 AQCTARNHVATCSCPAGYQGDAL-SRCYPAETTS  178 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~~G~~g~~~-~~c~~~~~~~  178 (189)
                       +|++..++|.|.|++||++... ..|.++..++
T Consensus        94 -~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~~~p  126 (134)
T 2vh0_B           94 -FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP  126 (134)
T ss_dssp             -EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             -EeECCCCCEEEECCCCcEECCCCCccCcCCCcC
Confidence             8999999999999999993221 2366665543

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.51  E-value=1.3e-07  Score=62.52  Aligned_cols=66  Identities=24%  Similarity=0.479  Sum_probs=49.0

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                      |.++++|++..++|.|.|++||.+.   .|+...++++|...+......|++     ..++|.|.|++||.+..
T Consensus        22 C~~~g~C~~~~~~y~C~C~~G~~G~---~C~~~~~~~~C~~~~~~C~~~C~n-----~~g~y~C~C~~G~~~~~   87 (114)
T 1aut_L           22 CCGHGTCIDGIGSFSCDCRSGWEGR---FCQREVSFLNCSLDNGGCTHYCLE-----EVGWRRCSCAPGYKLGD   87 (114)
T ss_dssp             TTTSEEECCCSSCCCEEECTTEEST---TSCEECCSSSSSSGGGGCSSEEEE-----CSSSEEEECCTTEEECT
T ss_pred             CCCcCCCCCCCCCcEeeCCCCCcCC---CcCcCCcCCcCcCCCCCCCCEeEC-----CCCCEEeECCCCeeECC
Confidence            7778899999999999999999998   886222234676432222238987     66789999999998643

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.51  E-value=4.1e-08  Score=61.77  Aligned_cols=69  Identities=25%  Similarity=0.475  Sum_probs=51.8

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCC-CCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPL-TQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLP  102 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~-~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~  102 (189)
                      ++++|...   | ++++|++..++|.|.|++||.+... ..|+   ++++|...+|.  +.|++     ..++|.|.|+ 
T Consensus         2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~---dideC~~~~C~--~~C~n-----~~g~y~C~C~-   69 (87)
T 1z6c_A            2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE---DIDECSENMCA--QLCVN-----YPGGYTCYCD-   69 (87)
T ss_dssp             CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE---CCCHHHHSCCS--SEECC-----CSSSCCEECC-
T ss_pred             ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC---CcCeeCCCCCC--CEEEc-----cCCCEEEECC-
Confidence            46677654   6 5678999999999999999984311 1684   78888878886  68988     6788999996 


Q ss_pred             CcccC
Q psy2457         103 GYVGD  107 (189)
Q Consensus       103 g~~~~  107 (189)
                      |+.|.
T Consensus        70 g~~G~   74 (87)
T 1z6c_A           70 GKKGF   74 (87)
T ss_dssp             SSSCC
T ss_pred             CCcCC
Confidence            44443

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.44  E-value=5.9e-08  Score=63.44  Aligned_cols=82  Identities=24%  Similarity=0.437  Sum_probs=29.8

Q ss_pred             CCCCccCCCCCCcccCCCCCCCCC--CCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccC
Q psy2457          53 PPGYTGDPLTQCRRFDPHDLCEPN--PCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCN  130 (189)
Q Consensus        53 ~~g~~~~~~~~c~~~~~~~~c~~~--~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~  130 (189)
                      ..+|.+.   .|    ++++|...  .|.  ..|.+     ..++|.|.|++||.+...     ..|.++++|...    
T Consensus        19 ~~~~~~~---~C----d~neC~~~~~~C~--~~C~n-----~~g~y~C~C~~Gy~g~~g-----~~C~dideC~~~----   75 (107)
T 2w2n_E           19 ENLYFQG---AM----GTNECLDNNGGCS--YVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDP----   75 (107)
T ss_dssp             -CCCCSC---CB----SCCGGGTGGGGCS--SEEEC-----CSBSCEEECCTTCEEETT-----TEEEC-----------
T ss_pred             CCCcCCC---CC----cCccCcCCCCCCC--CEeEe-----CCCCeEEECCCCccccCC-----CccccccccCCC----
Confidence            3455555   66    35777643  343  47887     567899999999988421     124444444310    


Q ss_pred             CCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         131 NYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       131 ~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                               .+|.  ++|++..++|.|.|++||+++..
T Consensus        76 ---------~~C~--~~C~n~~gsy~C~C~~Gy~~~~d  102 (107)
T 2w2n_E           76 ---------DTCS--QLCVNLEGGYKCQCEEGFQLDPH  102 (107)
T ss_dssp             --------------------------------------
T ss_pred             ---------CCcC--CeeecCCCCEEEECCCCceECCC
Confidence                     1475  68999999999999999987653

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.42  E-value=2.7e-07  Score=58.45  Aligned_cols=80  Identities=24%  Similarity=0.416  Sum_probs=58.6

Q ss_pred             cCCCCCCCccCCCCcccCCCCccccccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCe
Q psy2457           4 KFPPRPGFEPSPSRLVASPRDYLGIRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAK   83 (189)
Q Consensus         4 ~~~~~~gf~~~~~~~~~~~~~c~~~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~   83 (189)
                      ...|..||.+.         .| ++++|...     .|++..+.|.|.|++||.     .|+. .++++|..+||.++++
T Consensus         3 ~C~C~~g~~g~---------~c-~~~~c~~~-----pC~n~~~~y~C~C~~G~~-----~C~~-~~~~~C~~~pC~ngg~   61 (91)
T 1tpg_A            3 QVICRDEKTQM---------IY-QQHQSWLR-----PVLRSNRVEYCWCNSGRA-----QCHS-VPVKSCSEPRCFNGGT   61 (91)
T ss_dssp             CCCCBCSSSCC---------BC-CSSCEEEE-----ECSSSSCEEEEECSSSCC-----BCCE-ECEEECSSCCSCTTCE
T ss_pred             eeECCCCCcCC---------eE-CCCcccCC-----ccccCCCCcEeECCCCCc-----cccc-CcCCcccCCCCCCCCE
Confidence            45678888753         12 46666433     355567889999999996     4631 1468898899999999


Q ss_pred             eecCCCCCCC--CCCeeeCCCCcccCCC
Q psy2457          84 CQPGYDKSGK--DRPVCTCLPGYVGDAL  109 (189)
Q Consensus        84 C~~~~~~~~~--~~~~c~c~~g~~~~~~  109 (189)
                      |++     ..  +.|.|.|++||.|..+
T Consensus        62 C~~-----~~~~~~~~C~C~~G~~G~~C   84 (91)
T 1tpg_A           62 CQQ-----ALYFSDFVCQCPEGFAGKSC   84 (91)
T ss_dssp             EEE-----ESSSSCEEEECCTTCBSSSC
T ss_pred             eec-----CCCCCCeEeECCCCCcCCcC
Confidence            987     33  6799999999998763

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.41  E-value=1.3e-07  Score=61.74  Aligned_cols=70  Identities=24%  Similarity=0.507  Sum_probs=29.9

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLP  102 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~  102 (189)
                      ++++|...   |.  ..|++..++|.|.|++||.+.+...|+   ++++|.. .+|.  +.|++     ..++|.|.|++
T Consensus        28 d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~---dideC~~~~~C~--~~C~n-----~~gsy~C~C~~   95 (107)
T 2w2n_E           28 GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCS--QLCVN-----LEGGYKCQCEE   95 (107)
T ss_dssp             SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE---C----------------------------------
T ss_pred             cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc---cccccCCCCCcC--Ceeec-----CCCCEEEECCC
Confidence            78899753   75  499999999999999999983222784   7899973 6775  58887     66889999999


Q ss_pred             CcccCC
Q psy2457         103 GYVGDA  108 (189)
Q Consensus       103 g~~~~~  108 (189)
                      ||.+..
T Consensus        96 Gy~~~~  101 (107)
T 2w2n_E           96 GFQLDP  101 (107)
T ss_dssp             ------
T ss_pred             CceECC
Confidence            998753

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=98.40  E-value=2.8e-07  Score=48.73  Aligned_cols=33  Identities=27%  Similarity=0.696  Sum_probs=28.5

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      |+|.. +|.++++|++..++|.|.|++||+|..+
T Consensus         4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~C   37 (39)
T 1edm_B            4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC   37 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTS
T ss_pred             ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCcc
Confidence            45544 7999999999999999999999999875

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=98.37  E-value=1.4e-07  Score=62.80  Aligned_cols=81  Identities=32%  Similarity=0.678  Sum_probs=53.3

Q ss_pred             CCCCCCCCCCCCCCCeeecCCCCCC-CCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCC
Q psy2457          68 DPHDLCEPNPCGENAKCQPGYDKSG-KDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINA  146 (189)
Q Consensus        68 ~~~~~c~~~~c~~~~~C~~~~~~~~-~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~  146 (189)
                      .++++|..+||.+  +|++     . .++|.|.|++||.+...   ..+.|.+  .|...              +|.  +
T Consensus         2 ~dideC~~~pC~~--~C~~-----~~~g~y~C~C~~Gy~g~~~---~~~~C~~--~C~~~--------------~C~--~   53 (118)
T 1dx5_I            2 EPVDPCFRANCEY--QCQP-----LDQTSYLCVCAEGFAPIPH---EPHRCQM--FCNQT--------------ACP--A   53 (118)
T ss_dssp             CCCCGGGGCCCSS--EEEE-----CSSSCEEEECCTTEEEETT---EEEEEEE--CCCSS--------------EEE--C
T ss_pred             CccccCCCCCCCC--CCCC-----CCCCCEEeECCCCccccCC---CCCcccc--ccCCC--------------CCC--C
Confidence            4678888888974  8988     5 67899999999998742   1112221  11111              354  5


Q ss_pred             EeeeCCCCeeeeCCCCCccCCcccCeecCCc
Q psy2457         147 QCTARNHVATCSCPAGYQGDALSRCYPAETT  177 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~~  177 (189)
                      +|++ .++|.|.|++||++..-..|.++.++
T Consensus        54 ~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC   83 (118)
T 1dx5_I           54 DCDP-NTQASCECPEGYILDDGFICTDIDEC   83 (118)
T ss_dssp             EECT-TSTTCEECCTTEEEETTTEEEECCHH
T ss_pred             cccC-CCCeEeECCCCccCCCCCcccccccc
Confidence            7877 58899999999994422236666544

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.37  E-value=1.3e-06  Score=70.42  Aligned_cols=103  Identities=29%  Similarity=0.760  Sum_probs=70.5

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCC----------CCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPH----------DLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPG  103 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~----------~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g  103 (189)
                      |.++++|..  +.+.|.|.+||.|.   .|+  ...          +.|. ..+|...+.|..       +.+.|.|.+|
T Consensus       205 C~~~G~C~~--~~g~C~C~~G~~G~---~Ce--~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~-------~~~~C~C~~G  270 (423)
T 2gy5_A          205 CMNNGVCHE--DTGECICPPGFMGR---TCE--KACELHTFGRTCKERCSGQEGCKSYVFCLP-------DPYGCSCATG  270 (423)
T ss_dssp             CCTTCEECT--TTCCEECCTTEEST---TSC--EECCTTEESTTSCEECCSTTTTTTCCEEET-------TTTEEECCBT
T ss_pred             CCCCCEEEC--CCCcEeCCCCccCC---Ccc--cccCCCCCCCCcCccCCCCCCCCCCCEECC-------CCCeEEeCCC
Confidence            777889976  45789999999999   885  111          1233 345666677753       4699999999


Q ss_pred             cccCCCCcCccCCCCCC---CCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcccC
Q psy2457         104 YVGDALTYCRRGECQSD---AECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALSRC  171 (189)
Q Consensus       104 ~~~~~~~~c~~~~c~~~---~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c  171 (189)
                      |.|..++.    .|...   ..|.           ..|  +|.++++|.+..   .|.|++||+|..+..+
T Consensus       271 ~~G~~C~~----~C~~G~~G~~C~-----------~~C--~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~  321 (423)
T 2gy5_A          271 WKGLQCNE----ACHPGFYGPDCK-----------LRC--SCNNGEMCDRFQ---GCLCSPGWQGLQCERE  321 (423)
T ss_dssp             CBSGGGCB----CCCTTBCSBTTC-----------CBC--CCTTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred             cccccccC----ccCCCCcCCccc-----------ccc--cCCCCCEecCCC---ceECCCCCcCCCCccC
Confidence            99987652    23221   1121           112  488889998664   4999999999998643

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=98.31  E-value=4e-07  Score=51.84  Aligned_cols=35  Identities=20%  Similarity=0.452  Sum_probs=28.2

Q ss_pred             cCCccc-cCCCCCEee-----eCCCCeeeeCCCCCccCCcc
Q psy2457         135 EKACTS-QCGINAQCT-----ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       135 ~~~c~~-~C~~~~~C~-----~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|+|.+ +|+++|+|+     +..++|.|.|++||+|.++.
T Consensus         8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G            8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred             CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence            466666 899999994     56789999999999999975

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.27  E-value=1.8e-06  Score=73.42  Aligned_cols=106  Identities=25%  Similarity=0.612  Sum_probs=73.6

Q ss_pred             CCCCCEEeeCCCCeeeeCC----CCCccCCCCCCcccCCCCCCCC---CCCCCCCeeecCCCCCCCCCCeeeCCCCcccC
Q psy2457          35 CGVNSECNVRNHIPVCSCP----PGYTGDPLTQCRRFDPHDLCEP---NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGD  107 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~----~g~~~~~~~~c~~~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~  107 (189)
                      |.+++.|..    +.|.|.    +||.|.   .|+  .+...|..   .+|...+.|..         +.|.|.+||.|.
T Consensus       495 Cs~~G~C~~----g~C~C~~~~~~Gy~G~---~Ce--~~~~~C~~~~~~~C~~~G~C~~---------g~C~C~~Gy~G~  556 (690)
T 3fcs_B          495 CSQRGECLC----GQCVCHSSDFGKITGK---YCE--CDDFSCVRYKGEMCSGHGQCSC---------GDCLCDSDWTGY  556 (690)
T ss_dssp             GGGSEEECS----SSEEECCCSSCCCBST---TSC--BCSSCCCBSSSSBGGGSEEEET---------TEEEECTTEESS
T ss_pred             CCCCCEEEC----CeeEeecCCCCCeeCC---CcC--cccCcCcCCCCCCCCCCCEecC---------CeeECcCCCcCC
Confidence            777888973    589999    999999   896  45677874   46888889974         789999999999


Q ss_pred             CCCcC--ccCCCCC--CCCCCCCCccCCCee------------c--CCccccCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         108 ALTYC--RRGECQS--DAECNYDQVCNNYNC------------E--KACTSQCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       108 ~~~~c--~~~~c~~--~~~c~~~~~c~~~~c------------~--~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      .++ |  ....|..  ...|..+.+|.+++|            .  ..|..+|.+++.|++        |..+|+|..
T Consensus       557 ~Ce-C~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~C~~C~~~C~~~g~Cv~--------C~~g~tG~~  625 (690)
T 3fcs_B          557 YCN-CTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVE--------CKKFDRGAL  625 (690)
T ss_dssp             SSC-EECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTTSCBCTTSCCTTTSCCGGGT--------TTTTCCSSS
T ss_pred             CCc-cCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCCcCcCCCCCCCCCCCCCccc--------CCCCCccCC
Confidence            865 2  1334442  134555555554444            1  234336777777764        899999884

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.16  E-value=1.9e-06  Score=68.97  Aligned_cols=80  Identities=25%  Similarity=0.463  Sum_probs=54.7

Q ss_pred             CCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeee
Q psy2457          71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTA  150 (189)
Q Consensus        71 ~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~  150 (189)
                      ++|...++.....|.+     .+++|.|.|++||.+..-     ..|.++++|...             .+|.+  .|++
T Consensus         1 ~eC~~~~~~c~~~C~~-----~~~~y~C~C~~G~~~~~~-----~~C~dideC~~~-------------~~C~~--~C~n   55 (400)
T 3p5b_L            1 NECLDNNGGCSHVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDP-------------DTCSQ--LCVN   55 (400)
T ss_dssp             CCTTTTGGGCSSEEEE-----CSSSEEEECCTTEEECSS-----SCEEECCCCSTT-------------SSCSS--CCBC
T ss_pred             CcccCCCCCCCCEeEC-----CCCCeEEECCCCCCcCCC-----CcccCchhhhcc-------------CCCCC--ccCC
Confidence            3566666656678988     678899999999985221     124444444321             14654  7999


Q ss_pred             CCCCeeeeCCCCCccCCc-ccCeecC
Q psy2457         151 RNHVATCSCPAGYQGDAL-SRCYPAE  175 (189)
Q Consensus       151 ~~g~~~C~C~~G~~g~~~-~~c~~~~  175 (189)
                      ..|+|.|.|++||+++.. .+|.++.
T Consensus        56 ~~g~~~C~C~~g~~~~~~~~~C~~~~   81 (400)
T 3p5b_L           56 LEGGYKCQCEEGFQLDPHTKACKAVG   81 (400)
T ss_dssp             CSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred             Cccceeeeccccccccccccceeecc
Confidence            999999999999996644 4576654

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.10  E-value=1.7e-06  Score=73.41  Aligned_cols=114  Identities=24%  Similarity=0.635  Sum_probs=76.1

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCC---------CCCCC----CCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHD---------LCEPN----PCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~---------~c~~~----~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      |..++.|.    ...|.|.+||.|.   .|+  ...+         .|...    +|...+.|..         ..|.|.
T Consensus       437 Cs~~G~C~----~g~C~C~~Gy~G~---~Ce--c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~---------G~C~C~  498 (687)
T 3k6s_B          437 CHGKGFLE----CGICRCDTGYIGK---NCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---------GQCLCH  498 (687)
T ss_dssp             GGGSEEES----SSSEEECSSEEST---TSC--EESSSCCCSGGGSTTSSSTTSCGGGSSEEEET---------TEEEEC
T ss_pred             CCCCCEEe----CCEeEcCCCCcCC---ccc--ccCCcCCccccCCCCCCCCCCCcCCCCCEEeC---------CEEEcC
Confidence            66667775    2479999999999   885  2222         46532    3777888875         489999


Q ss_pred             ------CCcccCCCCcCccCCCCC--CCCCCC--CCccCCCee----------------cCCccc----cCCCCCEeeeC
Q psy2457         102 ------PGYVGDALTYCRRGECQS--DAECNY--DQVCNNYNC----------------EKACTS----QCGINAQCTAR  151 (189)
Q Consensus       102 ------~g~~~~~~~~c~~~~c~~--~~~c~~--~~~c~~~~c----------------~~~c~~----~C~~~~~C~~~  151 (189)
                            +||.|..++ +....|..  ...|..  +.+|..+.|                ++.|..    +|..+|+|.. 
T Consensus       499 ~~~~~~~G~~G~~Ce-~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~-  576 (687)
T 3k6s_B          499 TSDVPGKLIYGQYCE-CDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC-  576 (687)
T ss_dssp             CCCSTTCCEESTTSC-EESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS-
T ss_pred             CCCCCCCCccccccc-cccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC-
Confidence                  999998854 12344442  223544  444444444                245653    5888899976 


Q ss_pred             CCCeeeeCCCCCccCCcccC
Q psy2457         152 NHVATCSCPAGYQGDALSRC  171 (189)
Q Consensus       152 ~g~~~C~C~~G~~g~~~~~c  171 (189)
                         ..|.|++||+|..|..|
T Consensus       577 ---g~C~C~~Gy~G~~Ce~c  593 (687)
T 3k6s_B          577 ---NVCECHSGYQLPLCQEC  593 (687)
T ss_dssp             ---SCBCCSTTCCTTTTCCC
T ss_pred             ---CEEECCCCCcCCCCCCC
Confidence               37999999999998643

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=98.03  E-value=5.3e-06  Score=46.86  Aligned_cols=29  Identities=31%  Similarity=0.629  Sum_probs=26.0

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+  +..++|.|.|++||+|..+.
T Consensus        13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   43 (53)
T 1egf_A           13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             SSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             cCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence            698999998  78899999999999999864

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=98.03  E-value=1.5e-06  Score=50.48  Aligned_cols=34  Identities=32%  Similarity=0.702  Sum_probs=29.4

Q ss_pred             cCCccc-cCCCC--CEeeeCCCCeeeeCCCCCc-cCCc
Q psy2457         135 EKACTS-QCGIN--AQCTARNHVATCSCPAGYQ-GDAL  168 (189)
Q Consensus       135 ~~~c~~-~C~~~--~~C~~~~g~~~C~C~~G~~-g~~~  168 (189)
                      +|+|.+ +|.++  ++|++..++|.|.|++||+ |..+
T Consensus        11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C   48 (61)
T 2k2s_B           11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDG   48 (61)
T ss_dssp             CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECS
T ss_pred             CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCC
Confidence            356655 79988  7999999999999999999 9875

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.98  E-value=4.8e-06  Score=48.81  Aligned_cols=34  Identities=18%  Similarity=0.443  Sum_probs=27.9

Q ss_pred             CCccc-cCCCCCEeee-----CCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTA-----RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~-----~~g~~~C~C~~G~~g~~~~  169 (189)
                      ++|.. +|.++|+|++     ..++|.|.|++||+|..+.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence            34544 7999999986     5689999999999999964

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.89  E-value=1.1e-05  Score=42.41  Aligned_cols=36  Identities=25%  Similarity=0.563  Sum_probs=31.2

Q ss_pred             ccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          27 GIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        27 ~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ++++|... |.++++|++..++|.|.|++||.|.   .|+
T Consensus         2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~---~Ce   38 (39)
T 1edm_B            2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK---NCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST---TSC
T ss_pred             ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC---ccC
Confidence            56778766 9989999999999999999999988   774

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.87  E-value=1.3e-05  Score=64.05  Aligned_cols=60  Identities=27%  Similarity=0.587  Sum_probs=47.8

Q ss_pred             CEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          39 SECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        39 ~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                      ..|.+.+++|.|.|++||.+.+...|+   ++++|. ..+|..  .|.+     ..++|.|.|.+||.+..
T Consensus        12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~---dideC~~~~~C~~--~C~n-----~~g~~~C~C~~g~~~~~   72 (400)
T 3p5b_L           12 HVCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCSQ--LCVN-----LEGGYKCQCEEGFQLDP   72 (400)
T ss_dssp             SEEEECSSSEEEECCTTEEECSSSCEE---ECCCCSTTSSCSS--CCBC-----CSSSCBCCCCTTCCCCT
T ss_pred             CEeECCCCCeEEECCCCCCcCCCCccc---CchhhhccCCCCC--ccCC-----Cccceeeeccccccccc
Confidence            599999999999999999853222784   789997 356754  7887     67889999999998653

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.83  E-value=4.3e-06  Score=66.51  Aligned_cols=83  Identities=29%  Similarity=0.528  Sum_probs=19.4

Q ss_pred             CCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEe
Q psy2457          69 PHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQC  148 (189)
Q Consensus        69 ~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C  148 (189)
                      ++++|...++.....|.+     ..++|.|.|++||....-    ...|.++++|...             .+|.+  .|
T Consensus         2 ~~~~C~~~~~~c~~~C~~-----~~g~~~C~C~~G~~l~~~----~~~C~d~~eC~~~-------------~~C~~--~C   57 (386)
T 3v65_B            2 GEENCNVNNGGCAQKCQM-----IRGAVQCTCHTGYRLTED----GRTCQDVNECAEE-------------GYCSQ--GC   57 (386)
T ss_dssp             ------------------------------------------------------------------------CCTT--EE
T ss_pred             CcCcccCCCCCCCCCCcC-----CCCCcEeECCCCceECCC----CCccCccceeCCc-------------CcccC--cC
Confidence            357777666444447866     557799999999974320    0135454444311             15765  49


Q ss_pred             eeCCCCeeeeCCCCCccCC-cccCeecC
Q psy2457         149 TARNHVATCSCPAGYQGDA-LSRCYPAE  175 (189)
Q Consensus       149 ~~~~g~~~C~C~~G~~g~~-~~~c~~~~  175 (189)
                      .+..|+|.|.|++||.... -.+|.++.
T Consensus        58 ~~~~g~~~C~C~~g~~l~~d~~~C~~~~   85 (386)
T 3v65_B           58 TNSEGAFQCWCEAGYELRPDRRSCKALG   85 (386)
T ss_dssp             C-----CCEECCTTEEECTTSSCEEECS
T ss_pred             CCCCCCCeEEECCCceEcCCCCeECCcc
Confidence            9999999999999998332 23466554

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=97.82  E-value=3.6e-05  Score=62.00  Aligned_cols=90  Identities=28%  Similarity=0.697  Sum_probs=60.8

Q ss_pred             eeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCc-CccCCCCCCCCCCCC
Q psy2457          48 PVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTY-CRRGECQSDAECNYD  126 (189)
Q Consensus        48 ~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~-c~~~~c~~~~~c~~~  126 (189)
                      +.|.|..||.|.   .|+     ..|  .+|.+++.|..       +.+.|.|.+||.|..++. |...  .....|   
T Consensus       185 ~~c~C~~g~~G~---~C~-----~~C--~~C~~~G~C~~-------~~g~C~C~~G~~G~~Ce~~C~~g--~~g~~C---  242 (423)
T 2gy5_A          185 IVRRCEAQKWGP---ECN-----HLC--TACMNNGVCHE-------DTGECICPPGFMGRTCEKACELH--TFGRTC---  242 (423)
T ss_dssp             EECSSCTTEEST---TSC-----EEC--CCCCTTCEECT-------TTCCEECCTTEESTTSCEECCTT--EESTTS---
T ss_pred             cCCcCCCCCCCC---CCC-----CCC--CCCCCCCEEEC-------CCCcEeCCCCccCCCcccccCCC--CCCCCc---
Confidence            357899999988   784     234  37888899975       357999999999988652 2210  000111   


Q ss_pred             CccCCCeecCCccc--cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         127 QVCNNYNCEKACTS--QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       127 ~~c~~~~c~~~c~~--~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                              .++|..  .|.+++.|.  .+.|.|.|++||+|..+.
T Consensus       243 --------~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~  277 (423)
T 2gy5_A          243 --------KERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCN  277 (423)
T ss_dssp             --------CEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGC
T ss_pred             --------CccCCCCCCCCCCCEEC--CCCCeEEeCCCccccccc
Confidence                    122321  577778884  467899999999998875

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.80  E-value=0.00011  Score=62.84  Aligned_cols=81  Identities=25%  Similarity=0.464  Sum_probs=51.6

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEee
Q psy2457          70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCT  149 (189)
Q Consensus        70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~  149 (189)
                      +++|...+......|.+     ..++|.|.|++||.+..-     ..|.++++|....             .|.  .+|+
T Consensus       294 ~~eC~~~~~~C~~~C~~-----~~~~~~C~C~~G~~~~~~-----~~C~dideC~~~~-------------~C~--~~C~  348 (699)
T 1n7d_A          294 TNECLDNNGGCSHVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDPD-------------TCS--QLCV  348 (699)
T ss_dssp             CCCTTSSTTTSCTTCCC-----CTTCCCCCCCSSSCCCSS-----SCCCCCCCCSSSS-------------SCT--TTCC
T ss_pred             cccccccccCcCCCccc-----CCCCcEEeCCCCeEcCCC-----CcccCccccCCCC-------------ccc--cccc
Confidence            45555332111246776     667899999999985221     2355555554211             464  3799


Q ss_pred             eCCCCeeeeCCCCCccCCc-ccCeecC
Q psy2457         150 ARNHVATCSCPAGYQGDAL-SRCYPAE  175 (189)
Q Consensus       150 ~~~g~~~C~C~~G~~g~~~-~~c~~~~  175 (189)
                      +..++|.|.|++||++... .+|.++.
T Consensus       349 n~~g~y~C~C~~G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          349 NLEGGYKCQCEEGFQLDPHTKACKAVG  375 (699)
T ss_dssp             BCSSCBCCCCCSSCBCCSSCCCCBCCS
T ss_pred             cCCCCeeeeeecccccCCCCCcccccc
Confidence            9999999999999996543 4476553

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.80  E-value=1.8e-06  Score=60.54  Aligned_cols=91  Identities=21%  Similarity=0.381  Sum_probs=56.9

Q ss_pred             CCCCCCCccCCCCcccCCCCcccccc--chhh---C--CCCCEEeeCCC----CeeeeCCCCCc----------------
Q psy2457           5 FPPRPGFEPSPSRLVASPRDYLGIRL--SDSQ---C--GVNSECNVRNH----IPVCSCPPGYT----------------   57 (189)
Q Consensus         5 ~~~~~gf~~~~~~~~~~~~~c~~~~~--c~~~---C--~~~~~C~~~~~----~~~C~c~~g~~----------------   57 (189)
                      ..|.+||.+.     .+++.|.++++  |...   |  ..++.|++..+    +|.|.|..||.                
T Consensus        26 C~C~~Gy~~~-----~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y  100 (162)
T 1uzk_A           26 CDCPPDFELN-----PTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEY  100 (162)
T ss_dssp             EECCTTCEEC-----TTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHH
T ss_pred             EeCCCCCeEC-----CCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCc
Confidence            3578899876     56677887776  7542   2  23467777654    56666666554                


Q ss_pred             -----------cCCCCCCcccCCCCCCCC--CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          58 -----------GDPLTQCRRFDPHDLCEP--NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        58 -----------~~~~~~c~~~~~~~~c~~--~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                                 +.....+.  .++++|..  .+|.+ +.|++     ..++|.|.|++||.+..
T Consensus       101 ~C~C~~g~G~~~~~~~~~c--~dideC~~~~~~C~~-g~C~n-----~~gsy~C~C~~Gy~g~~  156 (162)
T 1uzk_A          101 KILCPGGEGFRPNPITVIL--EDIDECQELPGLCQG-GKCIN-----TFGSFQCRCPTGYYLNE  156 (162)
T ss_dssp             HHHCTTCTTEEECTTTCCE--EECCHHHHCGGGGBT-SEEEE-----CSSCEEEECCTTCCBCT
T ss_pred             eeECCCCCCcccCCCCCcc--CccccccCCCCCcCC-CEeEc-----CCCCEEeeCCCCccCCC
Confidence                       33211121  36788864  45865 69998     67889999999998864

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.76  E-value=2.9e-05  Score=67.23  Aligned_cols=71  Identities=24%  Similarity=0.475  Sum_probs=48.1

Q ss_pred             CeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCCCEeeeCCCCeeeeCCC
Q psy2457          82 AKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGINAQCTARNHVATCSCPA  161 (189)
Q Consensus        82 ~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~  161 (189)
                      ..|.+     ..++|.|.|++||.+..-     ..|.++++|....             .|.  .+|++..|+|.|.|++
T Consensus       324 ~~C~~-----~~~~y~C~C~~Gy~l~~g-----~~C~dideC~~~~-------------~C~--~~C~n~~gsy~C~C~~  378 (791)
T 3m0c_C          324 HVCND-----LKIGYECLCPDGFQLVAQ-----RRCEDIDECQDPD-------------TCS--QLCVNLEGGYKCQCEE  378 (791)
T ss_dssp             SEEEE-----CSBSEEEECCTTCEEETT-----TEEECCCCCSSSS-------------SCT--TTCCBCSSCBCCCCCS
T ss_pred             ccccC-----CCCCcccCCCCCCccCCC-----CccccCcccCCCC-------------CCC--CeeecCCCCceeecCC
Confidence            37887     667899999999975211     1244544443211             354  4799999999999999


Q ss_pred             CCccCCc-ccCeecCCc
Q psy2457         162 GYQGDAL-SRCYPAETT  177 (189)
Q Consensus       162 G~~g~~~-~~c~~~~~~  177 (189)
                      ||+++.. .+|.++...
T Consensus       379 Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          379 GFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             SEECCSSCCCCEETTSC
T ss_pred             CCEeCCCCceeeecccc
Confidence            9986443 458776543

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.69  E-value=1e-05  Score=64.34  Aligned_cols=69  Identities=22%  Similarity=0.535  Sum_probs=15.3

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCC-CCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDP-LTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~-~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      ++++|...   |.+  .|.+..++|.|.|++||...+ ...|   .++++|. ..+|..  .|.+     ..++|.|.|.
T Consensus         2 ~~~~C~~~~~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~~C---~d~~eC~~~~~C~~--~C~~-----~~g~~~C~C~   69 (386)
T 3v65_B            2 GEENCNVNNGGCAQ--KCQMIRGAVQCTCHTGYRLTEDGRTC---QDVNECAEEGYCSQ--GCTN-----SEGAFQCWCE   69 (386)
T ss_dssp             -------------------------------------------------------CCTT--EEC----------CCEECC
T ss_pred             CcCcccCCCCCCCC--CCcCCCCCcEeECCCCceECCCCCcc---CccceeCCcCcccC--cCCC-----CCCCCeEEEC
Confidence            56778654   654  898888899999999998321 1178   4789996 567765  3887     6788999999


Q ss_pred             CCcccC
Q psy2457         102 PGYVGD  107 (189)
Q Consensus       102 ~g~~~~  107 (189)
                      +||...
T Consensus        70 ~g~~l~   75 (386)
T 3v65_B           70 AGYELR   75 (386)
T ss_dssp             TTEEEC
T ss_pred             CCceEc
Confidence            999743

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.64  E-value=3.6e-05  Score=43.64  Aligned_cols=38  Identities=26%  Similarity=0.656  Sum_probs=31.6

Q ss_pred             ccccccchhh-CCCCCEEe-----eCCCCeeeeCCCCCccCCCCCCc
Q psy2457          25 YLGIRLSDSQ-CGVNSECN-----VRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        25 c~~~~~c~~~-C~~~~~C~-----~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ..++++|... |.++++|.     ...+.|.|.|++||.|.   .|+
T Consensus         5 ~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~---~CE   48 (55)
T 3u7u_G            5 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD---RCQ   48 (55)
T ss_dssp             EEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST---TSC
T ss_pred             cccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC---CcC
Confidence            3578999888 99999995     45678999999999999   996

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.62  E-value=8.1e-06  Score=66.54  Aligned_cols=77  Identities=27%  Similarity=0.658  Sum_probs=32.5

Q ss_pred             eeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCc
Q psy2457          49 VCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQV  128 (189)
Q Consensus        49 ~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~  128 (189)
                      ...|..+|.+.   .|+    .+.|.. +|.+ +.|..        ...|.|.+||.|..|   +...|.          
T Consensus       378 p~~C~~~~~g~---~c~----~~~C~~-~C~n-G~C~~--------~~~C~C~~G~~G~~C---~~~~C~----------  427 (463)
T 2wg3_C          378 PEECRATVQPA---QTL----TSECSR-LCRN-GYCTP--------TGKCCCSPGWEGDFC---RTAKCE----------  427 (463)
T ss_dssp             CGGGCCCCCCC---CCC----CCHHHH-HCCS-EEECT--------TSCEEECTTEESTTS---CEECC-----------
T ss_pred             cccCCCCCcCC---CCc----cccccC-CCCC-CccCC--------CCeECCCCCcCCCcC---CcCcCC----------
Confidence            45677777777   663    355643 5776 78975        368999999999863   222232          


Q ss_pred             cCCCeecCCccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         129 CNNYNCEKACTSQCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       129 c~~~~c~~~c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                                 .+|.++++|++.   +.|.|++||+|..|.
T Consensus       428 -----------~~C~~~g~C~~~---~~C~C~~G~~G~~C~  454 (463)
T 2wg3_C          428 -----------PACRHGGVCVRP---NKCLCKKGYLGPQCE  454 (463)
T ss_dssp             -----------------------------------------
T ss_pred             -----------CCCCCCCEECCC---CEEECCCCcccCCCC
Confidence                       247777889764   589999999999864

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=97.60  E-value=4.1e-05  Score=41.54  Aligned_cols=29  Identities=28%  Similarity=0.495  Sum_probs=25.2

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+  +..++|.|.|++||+|..+.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred             CCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence            588889997  67789999999999999864

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=97.60  E-value=2.9e-05  Score=42.37  Aligned_cols=28  Identities=29%  Similarity=0.541  Sum_probs=23.5

Q ss_pred             cCCCCCEeeeCC--CCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTARN--HVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~~--g~~~C~C~~G~~g~~~~  169 (189)
                      +|.+ |+|+...  ++|.|.|++||+|.++.
T Consensus        13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A           13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             SCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             CCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence            6888 7998644  68999999999999964

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.54  E-value=7.3e-05  Score=42.40  Aligned_cols=36  Identities=28%  Similarity=0.681  Sum_probs=28.4

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      .|.  ..|+|..|+|.|.|++||+. ....+|.++.+++
T Consensus        10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~   46 (55)
T 2jkh_L           10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   46 (55)
T ss_dssp             GCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             CcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence            475  37999999999999999983 3334599988875

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=97.45  E-value=4.1e-05  Score=44.39  Aligned_cols=38  Identities=24%  Similarity=0.449  Sum_probs=33.3

Q ss_pred             ccccccchhh-CCCC--CEEeeCCCCeeeeCCCCCc-cCCCCCCc
Q psy2457          25 YLGIRLSDSQ-CGVN--SECNVRNHIPVCSCPPGYT-GDPLTQCR   65 (189)
Q Consensus        25 c~~~~~c~~~-C~~~--~~C~~~~~~~~C~c~~g~~-~~~~~~c~   65 (189)
                      +.++++|... |.++  ++|++..++|.|.|++||. |.   .|+
T Consensus         8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~---~C~   49 (61)
T 2k2s_B            8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL---DGT   49 (61)
T ss_dssp             TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE---CSS
T ss_pred             cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC---CCC
Confidence            5677889877 9887  7999999999999999999 88   784

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.44  E-value=0.0003  Score=61.00  Aligned_cols=68  Identities=25%  Similarity=0.529  Sum_probs=50.0

Q ss_pred             cccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCCC
Q psy2457          28 IRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLPG  103 (189)
Q Consensus        28 ~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~g  103 (189)
                      +++|...   |.+  .|.+++++|.|.|++||.+.+...|+   ++++|. ..+|.  ..|.+     ..++|.|.|.+|
T Consensus       312 ~~~C~~~~~~C~~--~C~~~~~~y~C~C~~Gy~l~~g~~C~---dideC~~~~~C~--~~C~n-----~~gsy~C~C~~G  379 (791)
T 3m0c_C          312 TNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCE---DIDECQDPDTCS--QLCVN-----LEGGYKCQCEEG  379 (791)
T ss_dssp             CCSTTTGGGGCSS--EEEECSBSEEEECCTTCEEETTTEEE---CCCCCSSSSSCT--TTCCB-----CSSCBCCCCCSS
T ss_pred             cccccccccCccc--cccCCCCCcccCCCCCCccCCCCccc---cCcccCCCCCCC--Ceeec-----CCCCceeecCCC
Confidence            4555433   543  89999999999999999742222784   789997 33453  47887     678899999999


Q ss_pred             cccC
Q psy2457         104 YVGD  107 (189)
Q Consensus       104 ~~~~  107 (189)
                      |.+.
T Consensus       380 y~l~  383 (791)
T 3m0c_C          380 FQLD  383 (791)
T ss_dssp             EECC
T ss_pred             CEeC
Confidence            9764

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.44  E-value=6.5e-05  Score=54.99  Aligned_cols=95  Identities=24%  Similarity=0.623  Sum_probs=62.7

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCC---------CCC----CCCCCCCCeeecCCCCCCCCCCeeeCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHD---------LCE----PNPCGENAKCQPGYDKSGKDRPVCTCL  101 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~---------~c~----~~~c~~~~~C~~~~~~~~~~~~~c~c~  101 (189)
                      |..++.|..    ..|.|.+||.|.   .|+  ....         .|.    ..+|...+.|..         ..|.|.
T Consensus        98 Csg~G~C~~----g~C~C~~G~~G~---~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~---------g~C~C~  159 (217)
T 2p28_B           98 CHGKGFLEC----GICRCDTGYIGK---NCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCVC---------GQCLCH  159 (217)
T ss_dssp             TTTSEEEET----TEEEECTTEEST---TSC--EECCCCC-GGGGGGGBSSTTSCBGGGTEEEET---------TEEEEC
T ss_pred             cCCCceEEC----CEEECCCCccCC---ccc--ccCcccccccCCCcCCCCCCCCCCCCCCEEeC---------CceECC
Confidence            777788874    479999999999   775  2222         243    245777788874         579999


Q ss_pred             CC------cccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccccCCCC--CEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         102 PG------YVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTSQCGIN--AQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       102 ~g------~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~--~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|      |.|..++ +....|..      ..           ..+|..+  |+|..  +  .|.|.+||+|..+.
T Consensus       160 ~gw~~~~~~~G~~Ce-~~~~~C~~------~~-----------g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C~  213 (217)
T 2p28_B          160 TSDVPGKLIYGQYCE-CDTINCER------YN-----------GQVCGGPGRGLCFC--G--KCRCHPGFEGSACQ  213 (217)
T ss_dssp             CCCSTTCCEESTTSC-EESSCSCE------ET-----------TEETTCTTTEEEET--T--EEEECTTEESTTSC
T ss_pred             CCCCCcccEECCCcc-cCCccCCC------CC-----------CCCCCCCCCcEEeC--C--eeECCCCCccCCcC
Confidence            99      5676532 11122221      00           0147776  89975  2  89999999999864

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=97.43  E-value=0.00027  Score=39.64  Aligned_cols=36  Identities=28%  Similarity=0.547  Sum_probs=29.6

Q ss_pred             ccccchh----hCCCCCEEe--eCCCCeeeeCCCCCccCCCCCCc
Q psy2457          27 GIRLSDS----QCGVNSECN--VRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        27 ~~~~c~~----~C~~~~~C~--~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ++++|..    +|.++++|+  +..++|.|.|++||.|.   .|+
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~---~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD---RCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS---SSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC---cCC
Confidence            4566655    388889999  67789999999999998   886

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.38  E-value=4.4e-06  Score=57.50  Aligned_cols=49  Identities=33%  Similarity=0.631  Sum_probs=39.0

Q ss_pred             eeeeCCCCCc---cCCCCCCcccCCCCCCCC--CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          48 PVCSCPPGYT---GDPLTQCRRFDPHDLCEP--NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        48 ~~C~c~~g~~---~~~~~~c~~~~~~~~c~~--~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                      |.|.|++||.   +.   .|+   ++++|..  .+|.+ ++|++     ..++|.|.|++||.+..
T Consensus        88 ~~C~C~~Gy~~~~g~---~C~---dideC~~~~~~C~~-g~C~n-----~~g~y~C~C~~Gy~g~~  141 (147)
T 2w86_A           88 VDPICGKGYSRIKGT---QCE---DIDECEVFPGVCKN-GLCVN-----TRGSFKCQCPSGMTLDA  141 (147)
T ss_dssp             CCTTTCTTEEEEETT---EEE---ECCHHHHSTTCSSS-SEEEE-----ETTEEEEECCTTCCBCT
T ss_pred             CcccCCCccccCCCC---ccC---ccccccCCCCCCCC-CEEEC-----CCCCEEeeCCCCCccCC
Confidence            6789999996   55   784   6888874  44875 59998     66889999999998764

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=97.36  E-value=7.2e-05  Score=42.09  Aligned_cols=29  Identities=24%  Similarity=0.586  Sum_probs=25.6

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+  +..++|.|.|++||+|.++.
T Consensus        13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCeEEeeecCCCCEEEecCCCCcCCCCC
Confidence            688899998  66788999999999999974

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.36  E-value=9.3e-05  Score=44.32  Aligned_cols=24  Identities=17%  Similarity=0.231  Sum_probs=18.6

Q ss_pred             cCCCCCEeeeCCCCeeee-CCCCCc
Q psy2457         141 QCGINAQCTARNHVATCS-CPAGYQ  164 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~-C~~G~~  164 (189)
                      +|..+++|+|..|+|+|. +..||.
T Consensus        12 ~C~~~~~C~Nt~Gsy~C~~~~~g~~   36 (71)
T 2kl7_A           12 ACKGEMKCINHYGGYLCLPRSAAVI   36 (71)
T ss_dssp             SCTTEEEEEETTCCEEEEETTSCCC
T ss_pred             CCCCCCEeECCCCCeEecccCCccc
Confidence            587778999999999999 234444

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=97.27  E-value=6.7e-05  Score=52.81  Aligned_cols=53  Identities=28%  Similarity=0.767  Sum_probs=29.3

Q ss_pred             CeeeeCCCCCccCCCCCCcccCCCCCCCC-CCCCCCCeeecCCCCCCCCCCeeeCCCCcccCC
Q psy2457          47 IPVCSCPPGYTGDPLTQCRRFDPHDLCEP-NPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDA  108 (189)
Q Consensus        47 ~~~C~c~~g~~~~~~~~c~~~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~  108 (189)
                      .+.|.|.+||.+.   .|+  .++++|.. .+|.++++|++    ...+++.|.|++||.|..
T Consensus       113 ~~~C~C~~G~~G~---~C~--~~~~~C~~~~~C~~~g~C~~----~~~~~~~C~C~~G~~G~~  166 (169)
T 2vj2_A          113 PWQCLCETNWGGQ---LCD--KDLNYCGTHQPCLNGGTCSN----TGPDKYQCSCPEGYSGPN  166 (169)
T ss_dssp             TTCCEECTTEETT---TTC--EESCHHHHTCCCCTTCEEEE----CSTTCEEEECCTTCCSTT
T ss_pred             CCEEeCCCCCCCC---ccc--CCCCCCCCCCCCCCCCEEcC----CCCCCcEeECCCCCcCcC
Confidence            4556666666665   553  24455542 55666666654    013456666666666654

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.23  E-value=0.00077  Score=57.65  Aligned_cols=70  Identities=26%  Similarity=0.566  Sum_probs=52.1

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC-CCCCCCCCeeecCCCCCCCCCCeeeCCC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE-PNPCGENAKCQPGYDKSGKDRPVCTCLP  102 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~c~c~~  102 (189)
                      ++++|...   |.  ..|.+.+++|.|.|++||.+.....|   .++++|. ..+|.  ..|.+     ..++|.|.|.+
T Consensus       293 ~~~eC~~~~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C---~dideC~~~~~C~--~~C~n-----~~g~y~C~C~~  360 (699)
T 1n7d_A          293 GTNECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRC---EDIDECQDPDTCS--QLCVN-----LEGGYKCQCEE  360 (699)
T ss_dssp             CCCCTTSSTTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCC---CCCCCCSSSSSCT--TTCCB-----CSSCBCCCCCS
T ss_pred             ccccccccccCcC--CCcccCCCCcEEeCCCCeEcCCCCcc---cCccccCCCCccc--ccccc-----CCCCeeeeeec
Confidence            35566543   54  37999999999999999985322378   4789997 45675  36887     67889999999


Q ss_pred             CcccCC
Q psy2457         103 GYVGDA  108 (189)
Q Consensus       103 g~~~~~  108 (189)
                      ||.+..
T Consensus       361 G~~~~~  366 (699)
T 1n7d_A          361 GFQLDP  366 (699)
T ss_dssp             SCBCCS
T ss_pred             ccccCC
Confidence            998643

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=97.21  E-value=0.00025  Score=41.31  Aligned_cols=41  Identities=24%  Similarity=0.622  Sum_probs=32.2

Q ss_pred             ccchhh-CCCCCEEee-----CCCCeeeeCCCCCccCCCCCCcccCCCCCCC
Q psy2457          29 RLSDSQ-CGVNSECNV-----RNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE   74 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~-----~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~   74 (189)
                      ++|... |.++++|++     ..++|.|.|++||.|.   .|+  ..++++.
T Consensus         7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~---~Ce--~~i~~~~   53 (63)
T 1hae_A            7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA---RCT--ENVPMKV   53 (63)
T ss_dssp             CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST---TSC--EECCSSC
T ss_pred             CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCC---ccC--cCcCccc
Confidence            566655 998999997     5678999999999999   896  4455543

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=97.20  E-value=0.00016  Score=40.48  Aligned_cols=29  Identities=31%  Similarity=0.660  Sum_probs=23.4

Q ss_pred             cCCCCCEeee----CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTA----RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~----~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|++    ..++|.|.|++||+|.++.
T Consensus        15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            4667788986    3568999999999999864

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.08  E-value=0.00057  Score=58.11  Aligned_cols=81  Identities=28%  Similarity=0.655  Sum_probs=55.6

Q ss_pred             CCCCCEEeeCCCCeeeeCC------CCCccCCCCCCcccCCCCCCCC---CCCCC--CCeeecCCCCCCCCCCeeeCCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCP------PGYTGDPLTQCRRFDPHDLCEP---NPCGE--NAKCQPGYDKSGKDRPVCTCLPG  103 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~------~g~~~~~~~~c~~~~~~~~c~~---~~c~~--~~~C~~~~~~~~~~~~~c~c~~g  103 (189)
                      |.+++.|..  +  .|.|.      +||.|.   .|+  .+...|..   .+|..  .+.|..         ..|.|.+|
T Consensus       484 Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~---~Ce--~~~~~C~~~~~~~C~~~~~G~C~~---------g~C~C~~G  545 (687)
T 3k6s_B          484 CSGLGDCVC--G--QCLCHTSDVPGKLIYGQ---YCE--CDTINCERYNGQVCGGPGRGLCFC---------GKCRCHPG  545 (687)
T ss_dssp             GGSSEEEET--T--EEEECCCCSTTCCEEST---TSC--EESSCSCEETTEETSHHHHEEEET---------TEEEECTT
T ss_pred             CCCCCEEeC--C--EEEcCCCCCCCCCcccc---ccc--cccccccCCCCcCcCCCCCCeEEC---------CEEEcCCC
Confidence            777889973  2  89999      999999   885  34567763   35776  788875         48999999


Q ss_pred             cccCCCCcCc--cCCCCC--CCCCCCCCccCCCee
Q psy2457         104 YVGDALTYCR--RGECQS--DAECNYDQVCNNYNC  134 (189)
Q Consensus       104 ~~~~~~~~c~--~~~c~~--~~~c~~~~~c~~~~c  134 (189)
                      |.|..++ |.  ...|..  ...|..+.+|..++|
T Consensus       546 ~~G~~Ce-c~~~~~~C~~~~g~~Cs~~G~C~~g~C  579 (687)
T 3k6s_B          546 FEGSACQ-CERTTEGCLNPRRVECSGRGRCRCNVC  579 (687)
T ss_dssp             CCSTTSC-SCCSSCTTBCTTCSBTSSSCCBCSSCB
T ss_pred             CcCCCCc-cCCCCCCCCCCCCCCCCCCCcCCCCEE
Confidence            9999865 22  234442  134555555655555

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.05  E-value=0.00054  Score=40.68  Aligned_cols=36  Identities=22%  Similarity=0.535  Sum_probs=28.0

Q ss_pred             cCCCCCEeeeCCC-CeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         141 QCGINAQCTARNH-VATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       141 ~C~~~~~C~~~~g-~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      .|.+  .|++..| +|.|.|++||.. ..-.+|.++.+|.
T Consensus        14 gC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~   51 (69)
T 1kli_L           14 GCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   51 (69)
T ss_dssp             GCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             CcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence            3653  7999998 799999999983 3445699988765

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=97.03  E-value=0.00049  Score=38.42  Aligned_cols=25  Identities=32%  Similarity=0.611  Sum_probs=21.1

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      +|.  ++|++..|+|.|.|++||++..
T Consensus        21 ~C~--~~C~n~~Gsy~C~C~~Gy~~~~   45 (53)
T 1apq_A           21 QCQ--HLCHNYVGGYFCSCRPGYELQE   45 (53)
T ss_dssp             TTS--SEEEEETTEEEEECSTTCEECT
T ss_pred             CCC--CEeECCCCCeEEECCCCCeECC
Confidence            365  4899999999999999998644

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=97.01  E-value=0.00019  Score=58.54  Aligned_cols=62  Identities=32%  Similarity=0.806  Sum_probs=26.5

Q ss_pred             cccchhhCCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccC
Q psy2457          28 IRLSDSQCGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGD  107 (189)
Q Consensus        28 ~~~c~~~C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~  107 (189)
                      .+.|..+|.+ +.|...   ..|.|.+||.+.   .|+    ++.|.. +|.+++.|..        .+.|.|.+||.|.
T Consensus       392 ~~~C~~~C~n-G~C~~~---~~C~C~~G~~G~---~C~----~~~C~~-~C~~~g~C~~--------~~~C~C~~G~~G~  451 (463)
T 2wg3_C          392 TSECSRLCRN-GYCTPT---GKCCCSPGWEGD---FCR----TAKCEP-ACRHGGVCVR--------PNKCLCKKGYLGP  451 (463)
T ss_dssp             CCHHHHHCCS-EEECTT---SCEEECTTEEST---TSC----EECC----------------------------------
T ss_pred             cccccCCCCC-CccCCC---CeECCCCCcCCC---cCC----cCcCCC-CCCCCCEECC--------CCEEECCCCcccC
Confidence            4567655876 799753   479999999999   894    467865 8998899985        3789999999998


Q ss_pred             CC
Q psy2457         108 AL  109 (189)
Q Consensus       108 ~~  109 (189)
                      .|
T Consensus       452 ~C  453 (463)
T 2wg3_C          452 QC  453 (463)
T ss_dssp             --
T ss_pred             CC
Confidence            64

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=96.92  E-value=0.00039  Score=48.25  Aligned_cols=33  Identities=27%  Similarity=0.670  Sum_probs=28.1

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      ++|.. +|.++++|.+..++|.|+|++||.|..|
T Consensus       120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~C  153 (162)
T 1g1s_A          120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPEC  153 (162)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTS
T ss_pred             CCCcCCCCCCCCEEecCCCCceEeCCCCCcCccc
Confidence            44544 6888899999999999999999999875

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=96.88  E-value=0.0016  Score=45.41  Aligned_cols=117  Identities=25%  Similarity=0.606  Sum_probs=62.0

Q ss_pred             CCCCCEEeeCC--CCeee-eCCCCCccCCCCCCcccCC------C------CCCCCCCCCCC------CeeecCCCCCCC
Q psy2457          35 CGVNSECNVRN--HIPVC-SCPPGYTGDPLTQCRRFDP------H------DLCEPNPCGEN------AKCQPGYDKSGK   93 (189)
Q Consensus        35 C~~~~~C~~~~--~~~~C-~c~~g~~~~~~~~c~~~~~------~------~~c~~~~c~~~------~~C~~~~~~~~~   93 (189)
                      |.++++|....  +.+.| .|..+|.|.   .|+.-..      .      ..|..=.|...      +.|..       
T Consensus         3 C~~~g~C~~~~~~g~~~C~~C~~g~~G~---~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~-------   72 (162)
T 1klo_A            3 CPGGSSCAIVPKTKEVVCTHCPTGTAGK---RCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNR-------   72 (162)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEEST---TSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCT-------
T ss_pred             CcCcCcccccCCCCCEEeCCCCCCCcCC---CCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccC-------
Confidence            55667887654  56789 699999888   7742100      0      01111112222      23432       


Q ss_pred             CCCeee-CCCCcccCCCCcCccCCCCCCCCCCCCCccCCCeecCCccc-cCCCCC------EeeeCCCCeeeeCCCCCcc
Q psy2457          94 DRPVCT-CLPGYVGDALTYCRRGECQSDAECNYDQVCNNYNCEKACTS-QCGINA------QCTARNHVATCSCPAGYQG  165 (189)
Q Consensus        94 ~~~~c~-c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~~~~c~~~c~~-~C~~~~------~C~~~~g~~~C~C~~G~~g  165 (189)
                      ....|. |.++|.|..++.|.+..-  ...+....       .+.|.. .|...+      +|....|  .|.|++||+|
T Consensus        73 ~tG~C~~C~~g~~G~~Ce~C~~Gy~--g~~~~~~~-------~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G  141 (162)
T 1klo_A           73 LTGECLKCIYNTAGFYCDRCKEGFF--GNPLAPNP-------ADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSG  141 (162)
T ss_dssp             TTCCBCCBCTTEETTTTCEECTTEE--ECTTCSSG-------GGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEES
T ss_pred             CCCcccCCCCCCcCCCcCcCchhhc--CCccccCC-------CCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcC
Confidence            235684 999998888654332100  00111000       122333 455543      5654444  7999999999


Q ss_pred             CCcccCe
Q psy2457         166 DALSRCY  172 (189)
Q Consensus       166 ~~~~~c~  172 (189)
                      ..+..|.
T Consensus       142 ~~Cd~C~  148 (162)
T 1klo_A          142 RDCGTCD  148 (162)
T ss_dssp             TTCCEEC
T ss_pred             CCCCCCC
Confidence            9986554

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.86  E-value=0.00046  Score=37.49  Aligned_cols=35  Identities=31%  Similarity=0.617  Sum_probs=27.8

Q ss_pred             ccccchh---h-CCCCCEEeeCC--CCeeeeCCCCCccCCCCCCc
Q psy2457          27 GIRLSDS---Q-CGVNSECNVRN--HIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        27 ~~~~c~~---~-C~~~~~C~~~~--~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ++++|..   . |.+ ++|+...  +.|.|.|++||+|.   .|+
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~---~Ce   42 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV---RCE   42 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST---TSC
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC---CCC
Confidence            4566765   4 887 8998744  67999999999999   885

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=96.82  E-value=0.00042  Score=39.67  Aligned_cols=29  Identities=28%  Similarity=0.628  Sum_probs=24.2

Q ss_pred             cCCCCCEee--e--CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--A--RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~--~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+  .  ..+.|.|.|++||+|.++.
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            588889997  3  4457899999999999974

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.81  E-value=0.00049  Score=52.08  Aligned_cols=35  Identities=29%  Similarity=0.722  Sum_probs=31.2

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCcccCeecCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDALSRCYPAET  176 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~~~~  176 (189)
                      +|..++.|+|..|+|.|.|++||.|++.. |.+++.
T Consensus        14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~-C~d~d~   48 (285)
T 1gl4_A           14 QCSVHAECRDYATGFCCRCVANYTGNGRQ-CVAEGS   48 (285)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEECSSS-EEETTC
T ss_pred             CCCCCCEeEcCCCCeEEEcCCCCCCCCCc-CCCCCC
Confidence            58888999999999999999999988875 888766

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=96.75  E-value=0.00091  Score=55.32  Aligned_cols=99  Identities=16%  Similarity=0.339  Sum_probs=29.7

Q ss_pred             eCCCCCccCCCCCCcccCCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCCCCCCCccC
Q psy2457          51 SCPPGYTGDPLTQCRRFDPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAECNYDQVCN  130 (189)
Q Consensus        51 ~c~~g~~~~~~~~c~~~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~c~~~~~c~  130 (189)
                      .|.+||.+.   .+.   ....|..-+|...+.|.+... =....+.|.|.+||.|..++.|.+..-..   ...     
T Consensus       422 ~C~~Gy~G~---~c~---~~~~C~~C~C~~~gtc~~~~~-Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~---~~~-----  486 (525)
T 4aqs_A          422 VCKEGFYDL---SAE---DPYGCKSCACNPLGTIPGGNP-CDSETGYCYCKRLVTGQRCDQCLPQHWGL---SND-----  486 (525)
T ss_dssp             EECTTEECC---CTT---STTSSEECCCCTTTBCCSSCC-BCTTTCCBCBCTTCCSTTTCC-------------------
T ss_pred             CCCCCCcCC---CCC---CCCCCccCCCCCCceecCCCc-ccCCCCEEECCCCCcCCCcccCCCCccCC---CCC-----
Confidence            566666665   442   234454445555444432000 00124679999999998865433211000   000     


Q ss_pred             CCeecCCccc-cCCCCCEeeeC--CCCeeeeCCCCCccCCc
Q psy2457         131 NYNCEKACTS-QCGINAQCTAR--NHVATCSCPAGYQGDAL  168 (189)
Q Consensus       131 ~~~c~~~c~~-~C~~~~~C~~~--~g~~~C~C~~G~~g~~~  168 (189)
                          ++.|.. +|.+++.+...  ...+.|.|++||+|..+
T Consensus       487 ----~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~C  523 (525)
T 4aqs_A          487 ----LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQC  523 (525)
T ss_dssp             -----------------------------------------
T ss_pred             ----CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCC
Confidence                234444 56666554332  22347999999999885

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.75  E-value=0.002  Score=34.68  Aligned_cols=35  Identities=23%  Similarity=0.370  Sum_probs=25.7

Q ss_pred             CCCCC---CCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457          72 LCEPN---PCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL  109 (189)
Q Consensus        72 ~c~~~---~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~  109 (189)
                      +|...   ||.++++|..+   ...+.|.|.|++||.|..+
T Consensus         2 ~C~~~~~~pC~ngg~C~~~---~~~~~~~C~C~~G~~G~~C   39 (45)
T 1a3p_A            2 GXPSSYDGYCLNGGVXMHI---ESLDSYTCNCVIGYSGDRC   39 (45)
T ss_dssp             CCTTCCSSCCSSSCEEEEC---TTTSSEEEECCTTEETTTT
T ss_pred             CcccCCCCCCCCCCEEEee---cCCCCEEEEcCCCCcCCcC
Confidence            34445   89999999720   1446799999999999863

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.69  E-value=0.00053  Score=38.12  Aligned_cols=32  Identities=28%  Similarity=0.580  Sum_probs=26.1

Q ss_pred             EeeeCCCCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         147 QCTARNHVATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      .|++..|+|.|.|++||+. ..-.+|.++++++
T Consensus        11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p   43 (51)
T 1kig_L           11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             EeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence            5889999999999999983 3335699998876

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.47  E-value=0.002  Score=36.02  Aligned_cols=32  Identities=22%  Similarity=0.521  Sum_probs=25.9

Q ss_pred             EeeeCCC-CeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         147 QCTARNH-VATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~g-~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      .|++..+ +|.|.|++||+. ..-.+|.++++++
T Consensus        12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~   45 (53)
T 2bz6_L           12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence            6999988 799999999983 3335699998875

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.30  E-value=0.0025  Score=37.95  Aligned_cols=33  Identities=12%  Similarity=0.148  Sum_probs=25.1

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeee-CCCCCccC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCS-CPPGYTGD   59 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~-c~~g~~~~   59 (189)
                      ++++|...   |..++.|+|+.++|.|. +..||.+.
T Consensus         2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~   38 (71)
T 2kl7_A            2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND   38 (71)
T ss_dssp             CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred             ccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence            57778653   87777999999999997 45677654

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.24  E-value=0.0027  Score=35.23  Aligned_cols=23  Identities=35%  Similarity=0.693  Sum_probs=20.4

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.  ..|+++.++|.|.|++||.+.
T Consensus        22 C~--~~C~n~~Gsy~C~C~~Gy~~~   44 (53)
T 1apq_A           22 CQ--HLCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             TS--SEEEEETTEEEEECSTTCEEC
T ss_pred             CC--CEeECCCCCeEEECCCCCeEC
Confidence            75  399999999999999999865

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=96.23  E-value=0.0017  Score=49.16  Aligned_cols=39  Identities=31%  Similarity=0.623  Sum_probs=30.3

Q ss_pred             cccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          26 LGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        26 ~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .|+++|...   |..++.|+|+.++|.|.|.+||.+.+. .|.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~-~C~   44 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGR-QCV   44 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSS-SEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCC-cCC
Confidence            468899754   988889999999999999999997765 684

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=96.03  E-value=0.0068  Score=34.63  Aligned_cols=32  Identities=28%  Similarity=0.631  Sum_probs=25.1

Q ss_pred             EeeeCC-CCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         147 QCTARN-HVATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~-g~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      .|++.. |+|.|.|++||.. ..-.+|.++..++
T Consensus        12 ~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~p   45 (59)
T 2wph_E           12 FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFP   45 (59)
T ss_dssp             EEEECSTTCEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             EeEeCCCCCEEeeCCCCcEECCCCCcccCCCCCC
Confidence            699988 6999999999983 3335688887654

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=95.93  E-value=0.0047  Score=36.53  Aligned_cols=43  Identities=19%  Similarity=0.339  Sum_probs=30.6

Q ss_pred             cccccchhh---CCCCCEEeeCCC-CeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457          26 LGIRLSDSQ---CGVNSECNVRNH-IPVCSCPPGYTGDP-LTQCRRFDPHDLC   73 (189)
Q Consensus        26 ~~~~~c~~~---C~~~~~C~~~~~-~~~C~c~~g~~~~~-~~~c~~~~~~~~c   73 (189)
                      .|+++|...   |.+  .|+++.+ +|.|.|+.||.... .+.|.   +++++
T Consensus         3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~---d~dec   50 (69)
T 1kli_L            3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT---PTVEY   50 (69)
T ss_dssp             SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEE---ECSSS
T ss_pred             cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCccc---Ccccc
Confidence            467788644   876  8999998 89999999998542 22563   44544

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=95.82  E-value=0.0052  Score=34.52  Aligned_cols=34  Identities=32%  Similarity=0.632  Sum_probs=24.8

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDP-LTQCRRFDPHDLC   73 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~-~~~c~~~~~~~~c   73 (189)
                      |.+  .|++++++|.|.|++||.... ...|+   ++++|
T Consensus        11 C~~--~C~nt~Gsy~C~C~~Gy~L~~d~~~C~---didec   45 (55)
T 2jkh_L           11 CDQ--FCHEEQNSVVCSCARGYTLADNGKACI---PTGPY   45 (55)
T ss_dssp             CSS--EEEEETTEEEEECCTTEEECTTSSCEE---ESSSS
T ss_pred             cCc--EeEcCCCCeEEeCCCCCEECCCCCeec---cCccc
Confidence            764  899999999999999998532 12563   45554

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=95.66  E-value=0.0044  Score=34.62  Aligned_cols=28  Identities=29%  Similarity=0.748  Sum_probs=24.4

Q ss_pred             CCCCCEEe--eCCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECN--VRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~--~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.++++|+  ...++|.|.|++||+|.   .|+
T Consensus        14 C~nGG~C~~~~~~~~~~C~C~~GytG~---~Ce   43 (53)
T 1nql_B           14 CLHDGVCMYIEALDKYACNCVVGYIGE---RCQ   43 (53)
T ss_dssp             ECTTCEEEEETTTTEEEEEECTTEEST---TSC
T ss_pred             CCCCeEEeeecCCCCEEEecCCCCcCC---CCC
Confidence            88889998  45678999999999999   895

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=95.58  E-value=0.015  Score=38.39  Aligned_cols=29  Identities=21%  Similarity=0.605  Sum_probs=23.8

Q ss_pred             cCCCCCEeeeCC--CCe-eeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTARN--HVA-TCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~~--g~~-~C~C~~G~~g~~~~  169 (189)
                      +|.++++|.+..  .+| .|.|++||+|..+.
T Consensus         2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEECTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCcccCCCCCccCCCCCCCcccc
Confidence            478889998874  556 99999999999875

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=95.27  E-value=0.011  Score=47.28  Aligned_cols=74  Identities=19%  Similarity=0.490  Sum_probs=20.8

Q ss_pred             CCCeeeCCCCcccCCCCcCccC----CCCCCCCC----CCCCccCCCee---cCCccc---cCCCCCEeeeCCCCeeeeC
Q psy2457          94 DRPVCTCLPGYVGDALTYCRRG----ECQSDAEC----NYDQVCNNYNC---EKACTS---QCGINAQCTARNHVATCSC  159 (189)
Q Consensus        94 ~~~~c~c~~g~~~~~~~~c~~~----~c~~~~~c----~~~~~c~~~~c---~~~c~~---~C~~~~~C~~~~g~~~C~C  159 (189)
                      +.+.|.|..++.|..++.|.+.    ++.....+    .....|....|   .+.|..   +|.++++|.+..   .|.|
T Consensus       311 g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~C~~~~---~C~C  387 (426)
T 3zyj_B          311 SKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGTCHNNV---RCLC  387 (426)
T ss_dssp             TEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------------------
T ss_pred             CCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCCcCCCC---CCcC
Confidence            4578999999999987766432    23221110    01111222222   234433   788889998765   8999


Q ss_pred             CCCCccCCccc
Q psy2457         160 PAGYQGDALSR  170 (189)
Q Consensus       160 ~~G~~g~~~~~  170 (189)
                      ++||.|..|..
T Consensus       388 ~~G~~G~~Ce~  398 (426)
T 3zyj_B          388 PAAYTGILCEK  398 (426)
T ss_dssp             -----------
T ss_pred             CCCCcCCCCcC
Confidence            99999988753

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=95.16  E-value=0.0096  Score=32.76  Aligned_cols=28  Identities=25%  Similarity=0.692  Sum_probs=22.0

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+ |+|.  ...+.+.|.|++||+|+++.
T Consensus        15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             SCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             cccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence            4766 6785  45567899999999999974

>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*

Probab=95.13  E-value=0.021  Score=38.89  Aligned_cols=29  Identities=21%  Similarity=0.560  Sum_probs=23.7

Q ss_pred             cCCCCCEeeeC--CCCe-eeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTAR--NHVA-TCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~--~g~~-~C~C~~G~~g~~~~  169 (189)
                      +|.++++|+..  ..++ +|.|++||.|+.+.
T Consensus        14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Ce   45 (145)
T 2i9a_A           14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   45 (145)
T ss_dssp             CCCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             CCCCCCCcCCCccccCCccccCCCCCCCCcee
Confidence            58889999765  3556 89999999999975

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=94.89  E-value=0.026  Score=30.97  Aligned_cols=28  Identities=25%  Similarity=0.612  Sum_probs=22.0

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+ |+|.  ...+.+.|.|+.||+|+++.
T Consensus        19 yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           19 FCIH-GECKYIEHLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             TCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred             cCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence            4776 5896  44567899999999999963

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=94.89  E-value=0.028  Score=30.83  Aligned_cols=28  Identities=25%  Similarity=0.622  Sum_probs=22.1

Q ss_pred             cCCCCCEeee--CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTA--RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.++ +|..  ....+.|.|++||+|+++.
T Consensus        15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C           15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             cccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence            47765 8864  4467899999999999974

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=94.78  E-value=0.0096  Score=41.06  Aligned_cols=39  Identities=26%  Similarity=0.502  Sum_probs=29.5

Q ss_pred             cchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCcccCCCCCCC
Q psy2457          30 LSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCRRFDPHDLCE   74 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~   74 (189)
                      +|... |.++++|.+..++|.|.|++||.|.   .|+   .+++|.
T Consensus       121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~---~Ce---~~~~c~  160 (162)
T 1g1s_A          121 SCQDMSCSKQGECLETIGNYTCSCYPGFYGP---ECE---YVRDDD  160 (162)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTEEST---TSC---EECC--
T ss_pred             CCcCCCCCCCCEEecCCCCceEeCCCCCcCc---ccc---cCcccC
Confidence            34434 7677899999999999999999998   895   445664

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=94.69  E-value=0.017  Score=32.00  Aligned_cols=28  Identities=25%  Similarity=0.769  Sum_probs=23.9

Q ss_pred             CCCCCEEee----CCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNV----RNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~----~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.++++|++    ..++|.|.|+.||.|.   .|+
T Consensus        16 C~NGGtC~~~~~~~~~~y~C~C~~Gf~G~---~Ce   47 (52)
T 3ca7_A           16 CLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCE   47 (52)
T ss_dssp             SCTTCEEEEEEETTEEEEEEECCTTEEST---TSC
T ss_pred             CCCCCEEecCccCCCCCEEEECCCCCcCC---CCc
Confidence            888899986    3457899999999999   885

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=94.62  E-value=0.011  Score=40.50  Aligned_cols=34  Identities=29%  Similarity=0.698  Sum_probs=28.6

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      ++|.. +|.+.+.|.+....|.|.|.+||+|+.|.
T Consensus       120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce  154 (157)
T 1g1t_A          120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE  154 (157)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence            34444 68888999999999999999999999874

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=94.04  E-value=0.11  Score=32.74  Aligned_cols=69  Identities=26%  Similarity=0.663  Sum_probs=44.8

Q ss_pred             CCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCcc---CCCCCCCCCCCCCccCCCeecCCccccCCCCCEee
Q psy2457          73 CEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRR---GECQSDAECNYDQVCNNYNCEKACTSQCGINAQCT  149 (189)
Q Consensus        73 c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~---~~c~~~~~c~~~~~c~~~~c~~~c~~~C~~~~~C~  149 (189)
                      |....|...+.|.+    ...+...|+|..||.++... |.+   ..|...    +              .-|..+|+|.
T Consensus         7 C~~~~C~~NA~C~r----~~~g~e~C~C~~gy~gdg~~-Cv~~~~~sC~~n----N--------------GGCd~nA~C~   63 (99)
T 1ob1_C            7 CVKKQCPQNSGCFR----HLDEREECKCLLNYKQEGDK-CVENPNPTCNEN----N--------------GGCDADAKCT   63 (99)
T ss_dssp             CCSCCCCTTEEEEC----CTTSCCEEEECTTEEEETTE-EEECSCCCSTTG----G--------------GGCCTTEEEE
T ss_pred             eccCCCCCCCCeEE----cCCCCEEEEecCCeecCCCe-EeeCCCCChhhc----C--------------CCcCCCceeE
Confidence            33455666778864    24577899999999986522 322   133321    0              0388889997


Q ss_pred             eCC-----CCeeeeCCCCCc
Q psy2457         150 ARN-----HVATCSCPAGYQ  164 (189)
Q Consensus       150 ~~~-----g~~~C~C~~G~~  164 (189)
                      ...     +...|.|.+||.
T Consensus        64 ~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           64 EEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCSCSSSSCCCEEEECSTTC
T ss_pred             ecCCcccCCceEeEeCCCCc
Confidence            663     578999999874

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=93.80  E-value=0.018  Score=34.73  Aligned_cols=28  Identities=25%  Similarity=0.695  Sum_probs=21.1

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.++ +|.  ...+.+.|.|++||+|++|.
T Consensus        47 yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           47 FCIHG-ECKYVKELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             CCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred             cCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence            46664 784  33467899999999999964

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=93.59  E-value=0.049  Score=38.51  Aligned_cols=29  Identities=28%  Similarity=0.879  Sum_probs=23.0

Q ss_pred             ccccCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         138 CTSQCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       138 c~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      |...|.++|.|+. ++  .|.|++||.|..|.
T Consensus       151 C~~~C~ngG~Cv~-P~--~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          151 CPGGCRNGGFCNE-RR--ICECPDGFHGPHCE  179 (188)
T ss_dssp             CTTCCCTTCEECT-TS--CEECCTTCBTTTTC
T ss_pred             cCCCCCCCCEeCC-CC--cccCcCCCCCCCCc
Confidence            4346999999974 22  79999999999974

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=93.20  E-value=0.056  Score=44.95  Aligned_cols=35  Identities=23%  Similarity=0.529  Sum_probs=31.2

Q ss_pred             cccchhh-CCCCCEEee-CCCCeeeeCC-CCCccCCCCCCc
Q psy2457          28 IRLSDSQ-CGVNSECNV-RNHIPVCSCP-PGYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~~~-C~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~c~   65 (189)
                      +++|... |.++++|.+ ..++|.|.|. +||.|.   .|+
T Consensus         2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~---~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP---NCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT---TTC
T ss_pred             CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCC---CCC
Confidence            4678777 999999999 7889999999 999999   896

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=93.02  E-value=0.063  Score=37.28  Aligned_cols=31  Identities=29%  Similarity=0.555  Sum_probs=23.2

Q ss_pred             CCCCCEeeeCCCCeeeeCCCCCccCC-cccCeec
Q psy2457         142 CGINAQCTARNHVATCSCPAGYQGDA-LSRCYPA  174 (189)
Q Consensus       142 C~~~~~C~~~~g~~~C~C~~G~~g~~-~~~c~~~  174 (189)
                      |.+  .|.+..|+|.|.|++||+... ..+|.++
T Consensus       137 C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          137 CDH--HCHNHLGGFYCSCRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             SSS--EEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred             cCC--ccccCCCCEEEeCCCCcEECCCCCccccc
Confidence            654  799999999999999998332 2346654

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=92.92  E-value=0.54  Score=29.81  Aligned_cols=72  Identities=22%  Similarity=0.444  Sum_probs=46.4

Q ss_pred             CCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCCCcCccCCCCCCCC-CCCCCccCCCeecCCccccCCCCCEee
Q psy2457          71 DLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDALTYCRRGECQSDAE-CNYDQVCNNYNCEKACTSQCGINAQCT  149 (189)
Q Consensus        71 ~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~~~c~~~~c~~~~~-c~~~~~c~~~~c~~~c~~~C~~~~~C~  149 (189)
                      ..|....|...+.|..    ...+...|+|..||.++...      |..++. |...            ..-|..+|.|.
T Consensus        11 h~C~~t~Cp~NA~C~r----~~~G~e~CrCl~gY~~dg~~------Cv~~Np~C~~n------------NGGCd~nAeC~   68 (105)
T 1n1i_A           11 HKCIDTNVPENAACYR----YLDGTEEWRCLLGFKEVGGK------CVPASITCEEN------------NGGCAPEAECT   68 (105)
T ss_dssp             TSCCSSCCCTTEEEEE----CTTSCEEEEECTTEEECSSS------EEECCCCTTSG------------GGGSCTTSEEE
T ss_pred             cEecCCCCCCCCCeEE----CCCCCEeEEEECCeeccCCE------EEECCcchhhc------------CCCcCCCcEeE
Confidence            3444455667788865    24567889999999987532      222111 2210            00488899998


Q ss_pred             eCC-CCeeeeCCCCCc
Q psy2457         150 ARN-HVATCSCPAGYQ  164 (189)
Q Consensus       150 ~~~-g~~~C~C~~G~~  164 (189)
                      ... ....|.|..+|.
T Consensus        69 ~~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           69 MDDKKEVECKCTKEGS   84 (105)
T ss_dssp             ECTTSCEEEECCSTTC
T ss_pred             ECCCCEEEeECCCCCC
Confidence            774 688999998863

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=92.87  E-value=0.043  Score=31.10  Aligned_cols=28  Identities=25%  Similarity=0.769  Sum_probs=23.4

Q ss_pred             CCCCCEEee----CCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNV----RNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~----~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.++++|+.    ..+.+.|.|++||.|.   .|+
T Consensus        16 C~NGGtC~~~~~~~~~~~~C~C~~Gf~G~---~Ce   47 (58)
T 3ltf_D           16 CLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCE   47 (58)
T ss_dssp             SCSSCEEEEEEETTEEEEEEEECTTEESS---SSC
T ss_pred             CCCCCEEeCCccCCCCCEEeECCCCCccC---CCc
Confidence            888899983    3456899999999999   895

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=92.81  E-value=0.11  Score=35.97  Aligned_cols=33  Identities=27%  Similarity=0.696  Sum_probs=21.0

Q ss_pred             CCCCCCeeecCCCCCCCCCCee-eCCCCcccCCCCcC
Q psy2457          77 PCGENAKCQPGYDKSGKDRPVC-TCLPGYVGDALTYC  112 (189)
Q Consensus        77 ~c~~~~~C~~~~~~~~~~~~~c-~c~~g~~~~~~~~c  112 (189)
                      ||.+++.|..   ....+.+.| .|+++|.|..++.|
T Consensus         2 ~C~~~g~C~~---~~~~g~~~C~~C~~g~~G~~Ce~C   35 (162)
T 1klo_A            2 PCPGGSSCAI---VPKTKEVVCTHCPTGTAGKRCELC   35 (162)
T ss_dssp             CSCTTCCEEE---CSSSCCEEECSCCTTEESTTSCEE
T ss_pred             cCcCcCcccc---cCCCCCEEeCCCCCCCcCCCCcCC
Confidence            3556677764   011245788 69999999886644

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=92.72  E-value=0.046  Score=39.84  Aligned_cols=57  Identities=30%  Similarity=0.666  Sum_probs=42.9

Q ss_pred             CCCCCEEeeCCCCeeeeCCCC------CccCCCCCCcccCCCCCCCCC---CCCCC--CeeecCCCCCCCCCCeeeCCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPG------YTGDPLTQCRRFDPHDLCEPN---PCGEN--AKCQPGYDKSGKDRPVCTCLPG  103 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g------~~~~~~~~c~~~~~~~~c~~~---~c~~~--~~C~~~~~~~~~~~~~c~c~~g  103 (189)
                      |..++.|+.    ..|.|.+|      |.|.   .|+  .+...|...   +|...  +.|..         ..|.|.+|
T Consensus       145 Csg~G~C~~----g~C~C~~gw~~~~~~~G~---~Ce--~~~~~C~~~~g~~C~~~~~G~C~~---------g~C~C~~G  206 (217)
T 2p28_B          145 CSGLGDCVC----GQCLCHTSDVPGKLIYGQ---YCE--CDTINCERYNGQVCGGPGRGLCFC---------GKCRCHPG  206 (217)
T ss_dssp             GGGTEEEET----TEEEECCCCSTTCCEEST---TSC--EESSCSCEETTEETTCTTTEEEET---------TEEEECTT
T ss_pred             CCCCCEEeC----CceECCCCCCCcccEECC---Ccc--cCCccCCCCCCCCCCCCCCcEEeC---------CeeECCCC
Confidence            777788873    37999999      5788   885  345667643   68766  88875         48999999


Q ss_pred             cccCCC
Q psy2457         104 YVGDAL  109 (189)
Q Consensus       104 ~~~~~~  109 (189)
                      |.|..+
T Consensus       207 ~~G~~C  212 (217)
T 2p28_B          207 FEGSAC  212 (217)
T ss_dssp             EESTTS
T ss_pred             CccCCc
Confidence            999864

>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}

Probab=92.26  E-value=0.1  Score=41.47  Aligned_cols=34  Identities=18%  Similarity=0.575  Sum_probs=29.6

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCC-CCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPA-GYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~-G~~g~~~~  169 (189)
                      +.|.. +|.++++|+.....|.|.|+. ||.|..|.
T Consensus       186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~  221 (410)
T 3asi_A          186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN  221 (410)
T ss_dssp             SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSC
T ss_pred             CCcccccCCCCCEecCCCCCceEeccCCcccCCCCC
Confidence            56766 899999999999999999996 99998864

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=92.20  E-value=0.068  Score=44.10  Aligned_cols=58  Identities=26%  Similarity=0.603  Sum_probs=13.7

Q ss_pred             CCeeeeCCCCCccCCCCCCccc--------CCCCCCCCCCCCCCCeeecCCCCCCCCCCeeeCCCCcccCCC
Q psy2457          46 HIPVCSCPPGYTGDPLTQCRRF--------DPHDLCEPNPCGENAKCQPGYDKSGKDRPVCTCLPGYVGDAL  109 (189)
Q Consensus        46 ~~~~C~c~~g~~~~~~~~c~~~--------~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~~g~~~~~~  109 (189)
                      ....|.|.+||.|.   .|+.-        ..++.|..-+|...+.+...   -....+.|.|.+||.|..+
T Consensus       458 ~tg~C~C~~g~~G~---~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~---C~~~tG~C~C~~G~~G~~C  523 (525)
T 4aqs_A          458 ETGYCYCKRLVTGQ---RCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNS---CSEDSGQCSCLPHMIGRQC  523 (525)
T ss_dssp             TTCCBCBCTTCCST---TTCC---------------------------------------------------
T ss_pred             CCCEEECCCCCcCC---CcccCCCCccCCCCCCCCCcCCCCCCCCccCCc---cCCCCCeeECCCCCcCCCC
Confidence            34579999999998   77410        12344555556555544320   0112357999999999864

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=91.83  E-value=0.089  Score=29.10  Aligned_cols=34  Identities=24%  Similarity=0.480  Sum_probs=24.4

Q ss_pred             CCCCCEEeeCCC-CeeeeCCCCCccCC-CCCCcccCCCCCC
Q psy2457          35 CGVNSECNVRNH-IPVCSCPPGYTGDP-LTQCRRFDPHDLC   73 (189)
Q Consensus        35 C~~~~~C~~~~~-~~~C~c~~g~~~~~-~~~c~~~~~~~~c   73 (189)
                      |.+  .|+++.+ +|.|.|++||.... .+.|+   ++++|
T Consensus         9 C~~--~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~---d~dec   44 (53)
T 2bz6_L            9 CEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCT---PTVEY   44 (53)
T ss_dssp             CSS--EEEEETTTEEEEECCTTEEECTTSSCEE---ECSSS
T ss_pred             cCC--EeEcCCCCCEEeeCCCCCEECCCCCccc---CCccc
Confidence            655  8999988 79999999998542 22563   45554

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.99  E-value=0.12  Score=43.18  Aligned_cols=34  Identities=26%  Similarity=0.619  Sum_probs=29.0

Q ss_pred             ccchhh-CCCCCEEee-CCCCeeeeCC-CCCccCCCCCCc
Q psy2457          29 RLSDSQ-CGVNSECNV-RNHIPVCSCP-PGYTGDPLTQCR   65 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~-~~~~~~C~c~-~g~~~~~~~~c~   65 (189)
                      ++|... |.++++|.. ..++|.|.|. +||.|.   .|+
T Consensus         2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~---~Ce   38 (587)
T 3nt1_A            2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE---NCT   38 (587)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT---TTC
T ss_pred             CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCC---CCC
Confidence            567766 999999995 4578999999 999999   886

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=90.98  E-value=0.13  Score=42.93  Aligned_cols=37  Identities=32%  Similarity=0.831  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC-CCcccCCCC
Q psy2457          70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL-PGYVGDALT  110 (189)
Q Consensus        70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~-~g~~~~~~~  110 (189)
                      +++|..+||.++++|..    ...+.|.|.|+ +||.|..|+
T Consensus         1 vd~C~s~PC~ngG~C~~----~~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            1 ANPCCSNPCQNRGECMS----TGFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             CCTTTTCCCCTTCEEEE----EETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCCCCCCEeeC----CCCCCeEEecCCCCccCCCCC
Confidence            36788999999999984    02357999999 999998855

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=90.37  E-value=0.43  Score=30.00  Aligned_cols=69  Identities=26%  Similarity=0.582  Sum_probs=45.2

Q ss_pred             CCCCCEEeeC-CCCeeeeCCCCCccCCCCCCcccCCCCCCCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcc
Q psy2457          35 CGVNSECNVR-NHIPVCSCPPGYTGDPLTQCRRFDPHDLCEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYV  105 (189)
Q Consensus        35 C~~~~~C~~~-~~~~~C~c~~g~~~~~~~~c~~~~~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~  105 (189)
                      |..++.|... ++...|+|..||.+... .|.+ .....|..+.  |...+.|.........+...|.|.+++.
T Consensus        12 C~~NA~C~r~~~g~e~C~C~~gy~gdg~-~Cv~-~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~   83 (99)
T 1ob1_C           12 CPQNSGCFRHLDEREECKCLLNYKQEGD-KCVE-NPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS   83 (99)
T ss_dssp             CCTTEEEECCTTSCCEEEECTTEEEETT-EEEE-CSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred             CCCCCCeEEcCCCCEEEEecCCeecCCC-eEee-CCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence            6667788774 68889999999997754 6752 1124665432  7777888762110011457899998864

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=90.13  E-value=0.5  Score=30.92  Aligned_cols=29  Identities=21%  Similarity=0.510  Sum_probs=22.0

Q ss_pred             CCCCCCeeecCCCCCCC--CCC-eeeCCCCcccCCCC
Q psy2457          77 PCGENAKCQPGYDKSGK--DRP-VCTCLPGYVGDALT  110 (189)
Q Consensus        77 ~c~~~~~C~~~~~~~~~--~~~-~c~c~~g~~~~~~~  110 (189)
                      ||.++++|..     ..  ..+ .|.|+++|.|..++
T Consensus         2 pC~nggtC~~-----~~~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVS-----NKYFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEE-----CTTTTTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCC-----CcccCCCCCccCCCCCCCcccc
Confidence            6788889976     21  345 89999999998744

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=89.62  E-value=0.65  Score=29.43  Aligned_cols=63  Identities=22%  Similarity=0.455  Sum_probs=45.2

Q ss_pred             CCCCCEEee-CCCCeeeeCCCCCccCCCCCCcccCCCCC-CCCCC--CCCCCeeecCCCCCCCCCCeeeCCCCcc
Q psy2457          35 CGVNSECNV-RNHIPVCSCPPGYTGDPLTQCRRFDPHDL-CEPNP--CGENAKCQPGYDKSGKDRPVCTCLPGYV  105 (189)
Q Consensus        35 C~~~~~C~~-~~~~~~C~c~~g~~~~~~~~c~~~~~~~~-c~~~~--c~~~~~C~~~~~~~~~~~~~c~c~~g~~  105 (189)
                      |..++.|.. .++.-.|+|..||.+... .|.  .. +. |..+.  |...+.|..    ..+....|.|..++.
T Consensus        18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~-~Cv--~~-Np~C~~nNGGCd~nAeC~~----~~~~ki~C~C~~~~~   84 (105)
T 1n1i_A           18 VPENAACYRYLDGTEEWRCLLGFKEVGG-KCV--PA-SITCEENNGGCAPEAECTM----DDKKEVECKCTKEGS   84 (105)
T ss_dssp             CCTTEEEEECTTSCEEEEECTTEEECSS-SEE--EC-CCCTTSGGGGSCTTSEEEE----CTTSCEEEECCSTTC
T ss_pred             CCCCCCeEECCCCCEeEEEECCeeccCC-EEE--EC-CcchhhcCCCcCCCcEeEE----CCCCEEEeECCCCCC
Confidence            666788988 578889999999998765 685  23 55 54333  777788876    123467899988863

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=89.52  E-value=0.19  Score=27.43  Aligned_cols=27  Identities=33%  Similarity=0.984  Sum_probs=21.8

Q ss_pred             CCCCCEEee--CCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNV--RNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~--~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+ |+|+.  ..+.+.|.|+.||.|.   .|+
T Consensus        16 C~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe   44 (50)
T 1iox_A           16 CIK-GRCRFVVAEQTPSCVCDEGYIGA---RCE   44 (50)
T ss_dssp             CTT-CCEEEETTTTEEEECCCTTEETT---TTC
T ss_pred             ccC-CEEEeEcCCCCeEEECCCCcccC---CCC
Confidence            777 78963  3456889999999999   885

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=89.03  E-value=0.61  Score=25.38  Aligned_cols=27  Identities=30%  Similarity=0.795  Sum_probs=21.6

Q ss_pred             CCCCCEEee--CCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNV--RNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~--~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+ ++|+.  ..+.+.|.|+.||.|.   .|+
T Consensus        20 C~n-G~C~~i~~~~~~~C~C~~gy~G~---RCe   48 (50)
T 2rnl_A           20 CIH-GECKYIEHLEAVTCKCQQEYFGE---RCG   48 (50)
T ss_dssp             CSS-SEEEEETTTTEEEEECCSSCCSS---SCC
T ss_pred             CCC-CEEEEecCCCCeeEECCCCcccc---ccc
Confidence            876 69973  3456899999999999   885

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=88.50  E-value=0.42  Score=26.97  Aligned_cols=23  Identities=35%  Similarity=0.723  Sum_probs=19.6

Q ss_pred             CCCCCEEeeCC-CCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRN-HIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~-~~~~C~c~~g~~~~   59 (189)
                      |.+  .|++++ ++|.|.|++||...
T Consensus         9 C~~--~C~n~~~gs~~C~C~~Gy~L~   32 (59)
T 2wph_E            9 CEQ--FCKNSADNKVVCSCTEGYRLA   32 (59)
T ss_dssp             CSS--EEEECSTTCEEEECCTTEEEC
T ss_pred             cCC--EeEeCCCCCEEeeCCCCcEEC
Confidence            665  899998 69999999999854

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=87.43  E-value=0.66  Score=25.25  Aligned_cols=27  Identities=33%  Similarity=0.945  Sum_probs=21.9

Q ss_pred             CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+ |.|...  .+.+.|.|.+||.|.   .|+
T Consensus        16 C~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe   44 (50)
T 3e50_C           16 CFH-GTCRFLVQEDKPACVCHSGYVGA---RCE   44 (50)
T ss_pred             ccC-CEEeeccCCCCeEEECCCCCccc---CCC
Confidence            776 499863  367899999999999   885

>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...

Probab=87.09  E-value=0.26  Score=40.98  Aligned_cols=37  Identities=35%  Similarity=0.693  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCCCeeecCCCCCCCCCCeeeCC-CCcccCCCC
Q psy2457          70 HDLCEPNPCGENAKCQPGYDKSGKDRPVCTCL-PGYVGDALT  110 (189)
Q Consensus        70 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~c~c~-~g~~~~~~~  110 (189)
                      +++|..+||.++++|..    ...+.|.|.|. .||.|..|+
T Consensus         2 ~d~C~~~PC~ngG~C~~----~~~~~y~C~C~~~G~~G~~Ce   39 (553)
T 1q4g_A            2 VNPCCYYPCQHQGICVR----FGLDRYQCDCTRTGYSGPNCT   39 (553)
T ss_dssp             CCGGGGCCCCTTCEEEE----ETTTEEEEECTTSSEETTTTC
T ss_pred             CCcCCCCCCCCCCCcCC----CCCCceEeeCCCCCcCCCCCC
Confidence            46788899999999975    13457999999 999998854

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=86.87  E-value=0.6  Score=31.68  Aligned_cols=22  Identities=32%  Similarity=0.579  Sum_probs=19.0

Q ss_pred             CCCCCEeeeCCCCeeeeCCCCCcc
Q psy2457         142 CGINAQCTARNHVATCSCPAGYQG  165 (189)
Q Consensus       142 C~~~~~C~~~~g~~~C~C~~G~~g  165 (189)
                      |.  ..|.+..++|.|.|++||+.
T Consensus       128 C~--~~C~n~~g~~~C~C~~Gy~l  149 (159)
T 1nzi_A          128 CS--HFCNNFIGGYFCSCPPEYFL  149 (159)
T ss_dssp             SS--SEEEEETTEEEEECCTTCEE
T ss_pred             CC--CcccCcCCCEEEecCCCcEE
Confidence            64  47999999999999999994

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=85.51  E-value=0.55  Score=42.82  Aligned_cols=34  Identities=18%  Similarity=0.588  Sum_probs=30.0

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCC-CCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCP-AGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~-~G~~g~~~~  169 (189)
                      +.|.. +|.++|+|.....+|.|.|+ +||.|..|.
T Consensus      1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~ 1053 (1245)
T 3qcw_A         1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCN 1053 (1245)
T ss_dssp             CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSC
T ss_pred             CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCcc
Confidence            56766 89999999999999999999 699999974

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=84.59  E-value=0.8  Score=36.69  Aligned_cols=24  Identities=29%  Similarity=0.648  Sum_probs=19.4

Q ss_pred             CEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          39 SECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        39 ~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ..|....+.+.|.|..++.|.   .|+
T Consensus       304 s~C~~~~g~~~C~C~~~ttG~---~CE  327 (426)
T 3zyj_B          304 TVCVYDNSKLTCECEHNTTGP---DCG  327 (426)
T ss_dssp             SCEEEETTEEEECCCTTEESS---SSC
T ss_pred             hhcCCCCCCceeeCCCCCcCC---Ccc
Confidence            568776677899999999988   775

>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*

Probab=84.38  E-value=0.68  Score=42.24  Aligned_cols=34  Identities=32%  Similarity=0.720  Sum_probs=30.1

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCC-CCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCP-AGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~-~G~~g~~~~  169 (189)
                      +.|.. +|.+++.|......|.|.|+ .||.|..|.
T Consensus       620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~  655 (1245)
T 3qcw_A          620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCE  655 (1245)
T ss_dssp             CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSC
T ss_pred             CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCc
Confidence            56766 89999999999999999999 799999874

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=82.42  E-value=0.47  Score=36.71  Aligned_cols=29  Identities=21%  Similarity=0.471  Sum_probs=17.6

Q ss_pred             ccchhh--CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          29 RLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        29 ~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      ++|..+  |.+  .|++++++|.|.|.+||...
T Consensus         2 ~ec~~~~~C~~--~C~n~~g~~~C~C~~g~~l~   32 (349)
T 3v64_C            2 NECAEEGYCSQ--GCTNSEGAFQCWCEAGYELR   32 (349)
T ss_dssp             -------CCSS--EECCC---CCEECCTTEEEC
T ss_pred             cccCCCCCCcC--eeecCCCCeEEECCCCccCC
Confidence            556533  776  99999999999999999854

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=82.16  E-value=0.39  Score=32.65  Aligned_cols=33  Identities=30%  Similarity=0.438  Sum_probs=25.5

Q ss_pred             ccccccchhh----CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          25 YLGIRLSDSQ----CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        25 c~~~~~c~~~----C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +.++++|...    |.  ..|.+..+++.|.|.+||.+.
T Consensus       114 ~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~  150 (159)
T 1nzi_A          114 ATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH  150 (159)
T ss_dssp             EEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred             cccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence            4567777653    65  489999999999999999854

>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A

Probab=82.07  E-value=0.32  Score=32.89  Aligned_cols=28  Identities=32%  Similarity=0.865  Sum_probs=24.6

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+++.|.+....|.|.|.+||.|.   .|+
T Consensus       127 c~~~g~C~~~~~~~~c~C~~g~~g~---~Ce  154 (157)
T 1g1t_A          127 CSGHGECVETINNYTCKCDPGFSGL---KCE  154 (157)
T ss_dssp             GGGSEEEEEETTEEEEEECTTEEST---TSC
T ss_pred             CCCCCEeecCCCCeeEECCCCccCc---ccc
Confidence            6666889988899999999999999   885

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=80.78  E-value=0.37  Score=33.28  Aligned_cols=33  Identities=24%  Similarity=0.386  Sum_probs=25.5

Q ss_pred             ccccccchhh------CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          25 YLGIRLSDSQ------CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        25 c~~~~~c~~~------C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +.++++|...      |.+  .|.+..++|.|.|.+||...
T Consensus       121 ~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~  159 (170)
T 1szb_A          121 AEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH  159 (170)
T ss_dssp             EEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred             ccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence            4566777643      544  79999999999999999854

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=80.48  E-value=0.61  Score=28.04  Aligned_cols=34  Identities=32%  Similarity=0.769  Sum_probs=23.7

Q ss_pred             cccch---hh-CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457          28 IRLSD---SQ-CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~---~~-C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .++|.   .. |.+ +.|+..  .+.+.|.|.+||.|.   .|+
T Consensus        37 ~~pC~~~~~~yCln-G~C~~i~~~~~~~C~C~~GYtG~---RCE   76 (79)
T 1xdt_R           37 RDPCLRKYKDFCIH-GECKYVKELRAPSCICHPGYHGE---RCH   76 (79)
T ss_dssp             --CTTTTTTTCCSS-EEECCBGGGTBCCEEECTTEEST---TCC
T ss_pred             CCCCCccccCcCCC-CEeeeecCCCCeEEEcCCCcccc---ccc
Confidence            45665   23 876 489543  356889999999999   885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.76
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.66
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.64
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.64
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	98.57
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	98.56
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.32
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.32
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	98.31
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	98.24
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	98.19
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	98.19
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	98.15
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.15
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	98.14
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	98.1
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.08
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	98.05
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.05
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d1nt0a3	45	Mannose-binding protein associated serine protease	97.99
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.96
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.95
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	97.93
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.88
d1szba2	45	Mannose-binding protein associated serine protease	97.87
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.83
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.81
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.78
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.75
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.73
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.72
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.72
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.63
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.58
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.49
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	97.46
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	97.45
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.45
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.4
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.4
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	97.32
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	97.31
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.31
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.23
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.19
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.17
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	97.13
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.07
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	96.88
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.85
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	96.64
d1szba2	45	Mannose-binding protein associated serine protease	96.63
d1nt0a3	45	Mannose-binding protein associated serine protease	96.63
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	96.54
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.47
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	96.37
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	96.26
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	96.0
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	95.97
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	95.72
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	95.51
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	95.38
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	94.83
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	94.15
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	93.97
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	92.66
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	92.57
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	92.51
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	91.76
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	91.46
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.43
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	89.49
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	89.11
d1dx5i1	43	Thrombomodulin, different EGF-like domains {Human	87.76
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	85.79
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	84.33

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.5e-09  Score=54.62  Aligned_cols=35  Identities=29%  Similarity=0.615  Sum_probs=31.4

Q ss_pred             cCCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         135 EKACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       135 ~~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      ||+|.+ +|.++++|++..++|.|.|++||+|..+.
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccCcCe
Confidence            467766 89999999999999999999999999974

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.66  E-value=7.1e-09  Score=52.79  Aligned_cols=34  Identities=21%  Similarity=0.585  Sum_probs=30.4

Q ss_pred             cCCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         135 EKACTS-QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       135 ~~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      +|+|.+ +|.++++|++..++|.|.|++||+|..+
T Consensus         2 ~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   36 (37)
T d2c4fl1           2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC   36 (37)
T ss_dssp             CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTS
T ss_pred             cccCCCCCCCCCCEEECCCCCeEEECCCCCcCCCC
Confidence            467766 8999999999999999999999999875

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.3e-08  Score=52.49  Aligned_cols=34  Identities=26%  Similarity=0.678  Sum_probs=29.9

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      |+|.+ +|.++++|++..++|.|.|++||+|..+.
T Consensus         4 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred             ccCCCCCCCCCcEEEcCCCCEEEECCCCCCCCCCC
Confidence            55655 79999999999999999999999999863

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=1.3e-08  Score=53.51  Aligned_cols=29  Identities=24%  Similarity=0.595  Sum_probs=27.0

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++++|++..++|+|.|++||+|..+.
T Consensus        12 pC~n~g~C~n~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1          12 PCEHAGKCINTLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             SSSTTCEEEECSSSEEEECCTTEESTTSC
T ss_pred             CCCCCcEeECCCCCEEeECCCCCcCCCCc
Confidence            79999999999999999999999999863

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=2.6e-08  Score=49.99  Aligned_cols=33  Identities=30%  Similarity=0.803  Sum_probs=29.0

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDAL  168 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~  168 (189)
                      |+|.+ +|.++|+|++..++|+|.|++||.|.++
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~~C   34 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLC   34 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESSSS
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCCCc
Confidence            45655 7999999999999999999999999875

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.7e-08  Score=51.89  Aligned_cols=34  Identities=24%  Similarity=0.675  Sum_probs=30.0

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      |+|.+ +|.++|+|++..++|.|.|++||+|..+.
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETTTTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcCcCe
Confidence            45655 79999999999999999999999999974

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=6.6e-08  Score=49.71  Aligned_cols=34  Identities=29%  Similarity=0.698  Sum_probs=29.5

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +.|.+ +|.++|+|++..++|.|.|++||+|..+.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCEEEeCCCCCcCcCcC
Confidence            34555 79999999999999999999999999864

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=2.8e-07  Score=48.18  Aligned_cols=37  Identities=24%  Similarity=0.517  Sum_probs=32.1

Q ss_pred             cccccchhh---CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          26 LGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        26 ~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .|+++|...   |.++++|++..++|.|.|++||.|+   .|+
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~C~~G~~G~---~Ce   40 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP---RCE   40 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST---TSC
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeECCCCCcCC---CCc
Confidence            367888742   9999999999999999999999999   885

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.1e-07  Score=49.08  Aligned_cols=34  Identities=26%  Similarity=0.652  Sum_probs=29.4

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +.|.. +|.++|+|++..++|.|.|++||+|.++.
T Consensus         2 ~~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             CCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC
T ss_pred             CcccCCcCCCCcEEECCCCCeEEeCCCCccCCCCC
Confidence            34545 79999999999999999999999999964

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.2e-07  Score=49.84  Aligned_cols=30  Identities=27%  Similarity=0.584  Sum_probs=23.8

Q ss_pred             CCCCCEeeeCCCCeeeeCCCCCccCCcccCe
Q psy2457         142 CGINAQCTARNHVATCSCPAGYQGDALSRCY  172 (189)
Q Consensus       142 C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~  172 (189)
                      +..++.|+|..|+|.|.|++||++++.. |.
T Consensus        13 ~~~~~~C~Nt~Gsy~C~C~~Gy~~~g~~-C~   42 (43)
T d1emoa1          13 VCKHGQCINTDGSYRCECPFGYILAGNE-CV   42 (43)
T ss_dssp             SCSSSCCCCCSSCCCCCCCTTEEESSSC-EE
T ss_pred             CCCCCEeECCCCCeEeECCCCcccCCCc-cc
Confidence            4445789999999999999999865533 54

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.24  E-value=3.9e-07  Score=46.12  Aligned_cols=36  Identities=22%  Similarity=0.578  Sum_probs=32.4

Q ss_pred             ccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          27 GIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        27 ~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |+++|... |.++++|++..++|.|.|++||.|+   .|+
T Consensus         1 D~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~---~Ce   37 (37)
T d2c4fl1           1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGR---NCE   37 (37)
T ss_dssp             TCCGGGGCCCCTTCEEEEETTEEEEECCTTEEST---TSC
T ss_pred             CcccCCCCCCCCCCEEECCCCCeEEECCCCCcCC---CCC
Confidence            57888877 9999999999999999999999998   773

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=6.5e-07  Score=45.84  Aligned_cols=36  Identities=25%  Similarity=0.563  Sum_probs=32.8

Q ss_pred             ccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          27 GIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        27 ~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |+++|... |.++++|++..++|.|.|++||.|+   .|+
T Consensus         2 d~d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~---~Ce   38 (39)
T d1edmb_           2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK---NCE   38 (39)
T ss_dssp             CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST---TSC
T ss_pred             ccccCCCCCCCCCcEEEcCCCCEEEECCCCCCCC---CCC
Confidence            67889877 9999999999999999999999999   884

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=3.9e-07  Score=46.83  Aligned_cols=32  Identities=31%  Similarity=0.782  Sum_probs=28.2

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCcccCee
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDALSRCYP  173 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~c~~  173 (189)
                      .|..+++|+|..|+|.|.|++||+|++.. |.+
T Consensus         8 ~C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~~-C~~   39 (40)
T d1gl4a2           8 QCSVHAECRDYATGFCCRCVANYTGNGRQ-CVA   39 (40)
T ss_dssp             GSCTTEEEEECSSCEEEEECTTEEECSSS-EEE
T ss_pred             CCCCCCEeecCCCCeEeECCCCCcCCCCE-eeC
Confidence            58889999999999999999999998864 654

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=1.1e-06  Score=44.95  Aligned_cols=35  Identities=29%  Similarity=0.616  Sum_probs=31.6

Q ss_pred             cccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          28 IRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |++|... |.++++|++..++|.|.|++||.|.   .|+
T Consensus         1 Id~C~~~PC~n~g~C~~~~~~y~C~C~~G~~G~---~Ce   36 (39)
T d2vj3a2           1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGV---HCE   36 (39)
T ss_dssp             CCTTTTCCCCSSCEEEECSSCEEEECCTTEESS---SSC
T ss_pred             CcCCcCCCCCCCCEEECCCCCEEEeCCCCCccC---cCe
Confidence            4678777 9999999999999999999999999   885

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=3.7e-07  Score=47.86  Aligned_cols=37  Identities=16%  Similarity=0.312  Sum_probs=31.0

Q ss_pred             Cccccccchhh-CCCCCEEeeCCCCeeeeCCCCCccCC
Q psy2457          24 DYLGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDP   60 (189)
Q Consensus        24 ~c~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~   60 (189)
                      +|.|+++|..+ +..++.|+|++|+|.|.|++||.+..
T Consensus         1 sCvDidEC~~~~~~~~~~C~Nt~Gsy~C~C~~Gy~~~g   38 (43)
T d1emoa1           1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAG   38 (43)
T ss_dssp             CCCCCCSSSSTTSCSSSCCCCCSSCCCCCCCTTEEESS
T ss_pred             CCcceeccCCcCCCCCCEeECCCCCeEeECCCCcccCC
Confidence            47899999877 44457899999999999999998653

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=98.14  E-value=7.3e-07  Score=46.44  Aligned_cols=35  Identities=23%  Similarity=0.570  Sum_probs=29.1

Q ss_pred             cCCccc-cCCCCCEeeeC-CCCeeeeCCC-CCccCCcc
Q psy2457         135 EKACTS-QCGINAQCTAR-NHVATCSCPA-GYQGDALS  169 (189)
Q Consensus       135 ~~~c~~-~C~~~~~C~~~-~g~~~C~C~~-G~~g~~~~  169 (189)
                      +|+|.. +|.++|+|++. .++|.|.|+. ||+|..+.
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCcCcC
Confidence            466766 89999999864 6889999986 99999974

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=5e-07  Score=48.35  Aligned_cols=33  Identities=27%  Similarity=0.723  Sum_probs=28.1

Q ss_pred             CCccc-cCCCCCEeeeCCCCeeeeCCCCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~~g~~~C~C~~G~~g~~~~  169 (189)
                      ++|.+ +|.+ |+|++..++|.|.|++||+|..+.
T Consensus         9 ~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1           9 HPCASLCCGH-GTCIDGIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             CSSSSTTTTS-EEECCCSSCCCEEECTTEESTTSC
T ss_pred             CcccCCCCCC-CEEECCCCCCeEeCCCCCcCCCcc
Confidence            44545 7986 799999999999999999999974

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=6.4e-07  Score=47.05  Aligned_cols=26  Identities=31%  Similarity=0.770  Sum_probs=22.5

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      .|. +++|+|..|+|+|.|++||+++.
T Consensus        12 ~C~-~~~C~Nt~Gsy~C~C~~Gy~~~~   37 (44)
T d1lmja1          12 LCG-RGQCVNTPGDFECKCDEGYESGF   37 (44)
T ss_dssp             TTT-TSCEEEETTEEEECCCSSEEECT
T ss_pred             CCC-CCEeEcCCCCeEEeCCCCCccCC
Confidence            465 47899999999999999998764

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.2e-06  Score=45.33  Aligned_cols=37  Identities=24%  Similarity=0.638  Sum_probs=26.2

Q ss_pred             CCccc--cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCeec
Q psy2457         136 KACTS--QCGINAQCTARNHVATCSCPAGYQGDAL-SRCYPA  174 (189)
Q Consensus       136 ~~c~~--~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~~~  174 (189)
                      |||+.  .|.  ..|+|..|+|+|.|++||+.... .+|.++
T Consensus         2 dEC~~~~~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~~C~ai   41 (41)
T d1i0ua2           2 DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAV   41 (41)
T ss_dssp             CTTTTTTSCS--SCEECSSSCCEECCCTTEEECTTTCCEEEC
T ss_pred             ccCCCCCCCC--CEeECCCCCEEeECCCCCeECCCCCccccC
Confidence            44543  464  47999999999999999984332 446654

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.6e-06  Score=45.44  Aligned_cols=23  Identities=17%  Similarity=0.629  Sum_probs=20.2

Q ss_pred             CCEeeeCCCCeeeeCCCCCccCC
Q psy2457         145 NAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       145 ~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      .+.|+|..|+|.|.|++||+...
T Consensus        14 ~~~C~Nt~G~y~C~C~~Gy~l~~   36 (43)
T d1uzka1          14 SGNCVNTPGSYICDCPPDFELNP   36 (43)
T ss_dssp             TSEEEEETTEEEEECCTTCEECT
T ss_pred             CCEeECCCCCEEEecCCCCEECC
Confidence            47999999999999999998543

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=1.6e-06  Score=45.17  Aligned_cols=31  Identities=26%  Similarity=0.629  Sum_probs=24.4

Q ss_pred             cCCccc---cCCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         135 EKACTS---QCGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       135 ~~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                      ||||..   .|. +++|+|..|+|.|.|++||+..
T Consensus         2 idEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           2 IDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   35 (42)
T ss_dssp             CCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             ccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeEC
Confidence            355544   464 4799999999999999999844

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.99  E-value=2.2e-06  Score=45.35  Aligned_cols=29  Identities=24%  Similarity=0.432  Sum_probs=22.3

Q ss_pred             CCEeeeCCCCeeeeCCCCCcc-CCcccCee
Q psy2457         145 NAQCTARNHVATCSCPAGYQG-DALSRCYP  173 (189)
Q Consensus       145 ~~~C~~~~g~~~C~C~~G~~g-~~~~~c~~  173 (189)
                      ...|+|..|+|+|.|++||+. ..-.+|..
T Consensus        15 ~~~C~Nt~gsy~C~C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3          15 DHYCHNYLGGYYCSCRVGYILHQNKHTCSA   44 (45)
T ss_dssp             SSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCEeecCCCCEEEeCCCCCEECCCCCcccc
Confidence            358999999999999999983 33344654

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=4.2e-06  Score=41.63  Aligned_cols=34  Identities=32%  Similarity=0.696  Sum_probs=29.4

Q ss_pred             ccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          29 RLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ++|... |.++++|++..++|.|.|+.||.|.   .|+
T Consensus         1 d~C~~~PC~ngg~C~~~~~~y~C~C~~g~~G~---~CE   35 (35)
T d2vj3a3           1 DECASSPCLHNGRCLDKINEFQCECPTGFTGH---LCQ   35 (35)
T ss_dssp             CTTTTCCSTTTCEEEECSSCEEEECCTTEESS---SSC
T ss_pred             CCCCCCCCCCCcEEECCCCCeEEECCCCCCCC---CcC
Confidence            456666 9999999999999999999999998   773

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.95  E-value=4.3e-06  Score=43.16  Aligned_cols=29  Identities=24%  Similarity=0.659  Sum_probs=25.0

Q ss_pred             cCCCCCEeeeC--CCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTAR--NHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~~--~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+..  .++|.|.|++||+|.++.
T Consensus         5 PC~ngG~C~~~~~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           5 RCFNGGTCQQALYFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             CSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred             CCCCCCEEecCCCCCCeEECCCCCCCCCCcC
Confidence            68889999864  468999999999999975

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=3.1e-06  Score=44.24  Aligned_cols=32  Identities=25%  Similarity=0.676  Sum_probs=24.7

Q ss_pred             cCCccc---cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         135 EKACTS---QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       135 ~~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      ||||..   .|. +++|+|.+|+|.|.|++||+...
T Consensus         3 inEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~~   37 (43)
T d1uzka2           3 IDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLNE   37 (43)
T ss_dssp             CCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBCT
T ss_pred             cccccCCCCCcC-CCEEECCCCCeEeECCCCCeECc
Confidence            455543   464 36999999999999999998443

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.93  E-value=3.2e-06  Score=43.64  Aligned_cols=34  Identities=24%  Similarity=0.716  Sum_probs=27.8

Q ss_pred             CCccc-cCCCCCEeeeC-CCCeeeeCC-CCCccCCcc
Q psy2457         136 KACTS-QCGINAQCTAR-NHVATCSCP-AGYQGDALS  169 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~-~g~~~C~C~-~G~~g~~~~  169 (189)
                      |+|.. +|.++|+|++. .++|.|.|+ +||+|..+.
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCcCcC
Confidence            45655 79999999874 678999997 699999974

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=1.9e-06  Score=44.10  Aligned_cols=31  Identities=16%  Similarity=0.389  Sum_probs=24.1

Q ss_pred             cCCccc--cCCCCCEeeeCCCCeeeeCCCCCccCC
Q psy2457         135 EKACTS--QCGINAQCTARNHVATCSCPAGYQGDA  167 (189)
Q Consensus       135 ~~~c~~--~C~~~~~C~~~~g~~~C~C~~G~~g~~  167 (189)
                      ||||+.  .|.  ..|+|..|+|+|.|++||++..
T Consensus         2 idEC~~~~~C~--~~C~N~~Gsy~C~C~~Gy~l~g   34 (40)
T d1dx5i3           2 IDECENGGFCS--GVCHNLPGTFECICGPDSALAG   34 (40)
T ss_dssp             CCHHHHCSSCS--SEEEECSSSEEEEECSSSSCEE
T ss_pred             ccccCCCcCcc--CEeeCCCCCeEeECCCCCeeCC
Confidence            355544  565  5899999999999999998643

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=4.9e-06  Score=43.92  Aligned_cols=29  Identities=28%  Similarity=0.504  Sum_probs=22.2

Q ss_pred             CCEeeeCCCCeeeeCCCCCccCC-cccCee
Q psy2457         145 NAQCTARNHVATCSCPAGYQGDA-LSRCYP  173 (189)
Q Consensus       145 ~~~C~~~~g~~~C~C~~G~~g~~-~~~c~~  173 (189)
                      ...|+|..|+|.|.|++||+... -.+|.+
T Consensus        15 ~~~C~Nt~Gsy~C~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2          15 DHHCHNHLGGFYCSCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             SSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred             CCCCccCCCCeEEECCCCCeECCCCCCccC
Confidence            35899999999999999998333 244653

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=5.8e-06  Score=42.12  Aligned_cols=34  Identities=21%  Similarity=0.632  Sum_probs=29.8

Q ss_pred             ccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          29 RLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      ++|... |.++++|++..+.|.|.|++||.|.   .|+
T Consensus         1 D~C~~~PC~ngg~C~~~~~~y~C~C~~G~~G~---~Ce   35 (39)
T d1xkba1           1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGK---NCE   35 (39)
T ss_dssp             CTTTTCCCCSSCEECCCSSSCCEECCTTEETT---TTC
T ss_pred             CcCCCCCCCCCcEEECCCCCEEEECCCCCCcC---cCe
Confidence            356666 9999999999999999999999999   885

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=5.1e-06  Score=47.22  Aligned_cols=33  Identities=18%  Similarity=0.479  Sum_probs=26.7

Q ss_pred             Cccc-cCCCCCEee-----eCCCCeeeeCCCCCccCCcc
Q psy2457         137 ACTS-QCGINAQCT-----ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       137 ~c~~-~C~~~~~C~-----~~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.. +|.++|+|.     +..++|.|.|++||+|.++.
T Consensus         8 ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_           8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             HHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            3444 799999994     45678999999999999985

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.78  E-value=1e-05  Score=44.29  Aligned_cols=28  Identities=25%  Similarity=0.462  Sum_probs=21.7

Q ss_pred             CCEeeeCCCCeeeeCCCCCccCCc-ccCe
Q psy2457         145 NAQCTARNHVATCSCPAGYQGDAL-SRCY  172 (189)
Q Consensus       145 ~~~C~~~~g~~~C~C~~G~~g~~~-~~c~  172 (189)
                      ...|+|++|+|+|.|++||+.... .+|.
T Consensus        23 ~~~C~Nt~GsY~C~C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_          23 QHLCHNYVGGYFCSCRPGYELQEDRHSCQ   51 (53)
T ss_dssp             SSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred             cCEeEcCCCCeEeECCCCCeECCCCCcee
Confidence            458999999999999999984332 3354

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=6.1e-06  Score=42.82  Aligned_cols=32  Identities=25%  Similarity=0.562  Sum_probs=27.1

Q ss_pred             ccccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          27 GIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        27 ~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |+++|...   |. ++.|+|++|+|+|.|++||...
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~l~   35 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS   35 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEeCCCCCeEC
Confidence            57888766   65 5799999999999999999855

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=7.3e-06  Score=41.81  Aligned_cols=31  Identities=19%  Similarity=0.339  Sum_probs=26.2

Q ss_pred             ccccchhh--CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          27 GIRLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        27 ~~~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |+++|..+  |.+  .|+|++|+|+|.|++||.+.
T Consensus         1 DidEC~~~~~C~~--~C~N~~Gsy~C~C~~Gy~l~   33 (40)
T d1dx5i3           1 DIDECENGGFCSG--VCHNLPGTFECICGPDSALA   33 (40)
T ss_dssp             ECCHHHHCSSCSS--EEEECSSSEEEEECSSSSCE
T ss_pred             CccccCCCcCccC--EeeCCCCCeEeECCCCCeeC
Confidence            57788766  764  99999999999999999854

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=8.9e-06  Score=42.41  Aligned_cols=33  Identities=24%  Similarity=0.464  Sum_probs=27.6

Q ss_pred             cccccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          26 LGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        26 ~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      .||++|...   |. ++.|+|++|+|.|.|++||...
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~Gsy~C~C~~Gy~l~   36 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTFGSFQCRCPTGYYLN   36 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECSSCEEEECCTTCCBC
T ss_pred             CCcccccCCCCCcC-CCEEECCCCCeEeECCCCCeEC
Confidence            378888865   65 4699999999999999999865

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=6.8e-06  Score=42.97  Aligned_cols=33  Identities=24%  Similarity=0.508  Sum_probs=28.0

Q ss_pred             cccccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          26 LGIRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        26 ~~~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +|++||...   |. ++.|+|++|+|.|.|++||.+.
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGDFECKCDEGYESG   36 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTEEEECCCSSEEEC
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCCeEEeCCCCCccC
Confidence            478899765   65 4789999999999999999865

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.6e-05  Score=41.43  Aligned_cols=34  Identities=15%  Similarity=0.423  Sum_probs=27.4

Q ss_pred             cccccchhh-CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          26 LGIRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        26 ~~~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +|+++|..+ ..-++.|+|++|+|.|.|++||...
T Consensus         1 TDidEC~~~~~~c~~~C~Nt~G~y~C~C~~Gy~l~   35 (43)
T d1uzka1           1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELN   35 (43)
T ss_dssp             CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEEC
T ss_pred             CCccccCCCCcCcCCEeECCCCCEEEecCCCCEEC
Confidence            478899776 1124699999999999999999865

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=5.9e-06  Score=42.14  Aligned_cols=33  Identities=27%  Similarity=0.732  Sum_probs=28.9

Q ss_pred             cchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          30 LSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .|... |.++++|++..++|.|.|++||.|+   .|+
T Consensus         3 ~C~~~pC~ngg~C~~~~~~~~C~C~~g~~G~---~Ce   36 (39)
T d1g1ta2           3 ACTNTSCSGHGECVETINNYTCKCDPGFSGL---KCE   36 (39)
T ss_dssp             CCCTTGGGGSEEEEEETTEEEEEECTTEEST---TSC
T ss_pred             cccCCcCCCCcEEECCCCCEEEeCCCCCcCc---CcC
Confidence            45555 8889999999999999999999999   886

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=4.5e-05  Score=38.91  Aligned_cols=29  Identities=28%  Similarity=0.666  Sum_probs=22.9

Q ss_pred             CCccc---cCCCCCEeeeCCCCeeeeCCCCCccC
Q psy2457         136 KACTS---QCGINAQCTARNHVATCSCPAGYQGD  166 (189)
Q Consensus       136 ~~c~~---~C~~~~~C~~~~g~~~C~C~~G~~g~  166 (189)
                      |||..   .|.  ..|++.+++|.|.|++||+..
T Consensus         3 neC~~~nggC~--h~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           3 NECLDNNGGCS--HVCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             CGGGTGGGGCS--SEEEECSSSEEEECCTTCCEE
T ss_pred             ccCCCCCCCCc--CEEEcCCCCEEEECCCCCEEC
Confidence            45543   475  489999999999999999853

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=1.9e-05  Score=41.99  Aligned_cols=34  Identities=26%  Similarity=0.557  Sum_probs=29.8

Q ss_pred             cccchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          28 IRLSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .++|... |.+ ++|++..++|+|.|++||.|.   .|+
T Consensus         8 ~~~C~~~PC~n-G~C~~~~~~y~C~C~~G~~G~---~Ce   42 (48)
T d1autl1           8 EHPCASLCCGH-GTCIDGIGSFSCDCRSGWEGR---FCQ   42 (48)
T ss_dssp             CCSSSSTTTTS-EEECCCSSCCCEEECTTEEST---TSC
T ss_pred             CCcccCCCCCC-CEEECCCCCCeEeCCCCCcCC---Ccc
Confidence            5677777 876 899999999999999999999   896

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=7.4e-05  Score=40.60  Aligned_cols=29  Identities=31%  Similarity=0.620  Sum_probs=24.4

Q ss_pred             cCCCCCEeee--CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTA--RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+.  ....|.|.|++||+|.++.
T Consensus        13 ~C~NgG~C~~~~~~~~~~C~C~~gy~G~~Ce   43 (53)
T d3egfa_          13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             CSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred             CCCCCcEeeccCCCCCeEeECCCCCcCCCCc
Confidence            5888899974  4458999999999999974

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=2.5e-05  Score=39.91  Aligned_cols=33  Identities=30%  Similarity=0.693  Sum_probs=28.5

Q ss_pred             cchhh-CCCCCEEeeCCCCeeeeCCCCCccCCCCCCc
Q psy2457          30 LSDSQ-CGVNSECNVRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .|... |.++++|+...++|.|.|++||.|+   .|+
T Consensus         3 ~C~~~pC~ngg~C~~~~~~y~C~C~~g~~G~---~Ce   36 (40)
T d1g1sa2           3 SCQDMSCSKQGECLETIGNYTCSCYPGFYGP---ECE   36 (40)
T ss_dssp             CCCTTGGGGSEEEEECSSSEEEEECTTEEST---TSC
T ss_pred             cccCCcCCCCcEEECCCCCeEEeCCCCccCC---CCC
Confidence            34444 8888999999999999999999999   885

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5e-05  Score=41.38  Aligned_cols=34  Identities=24%  Similarity=0.378  Sum_probs=25.9

Q ss_pred             cccccchhh---CCC------CCEEeeCCCCeeeeCCCCCccC
Q psy2457          26 LGIRLSDSQ---CGV------NSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        26 ~~~~~c~~~---C~~------~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      .||++|...   |..      ...|+|++|+|+|.|++||.+.
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~C~~Gy~l~   44 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQ   44 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEEC
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeECCCCCeEC
Confidence            467777654   321      2389999999999999999855

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=6.9e-05  Score=38.61  Aligned_cols=30  Identities=27%  Similarity=0.468  Sum_probs=22.6

Q ss_pred             cCCCCCEeeeCCCCeeeeCCCCCccCCc-ccCe
Q psy2457         141 QCGINAQCTARNHVATCSCPAGYQGDAL-SRCY  172 (189)
Q Consensus       141 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~c~  172 (189)
                      .|.  ..|++..|+|+|.|++||+.... .+|.
T Consensus        10 ~C~--~~C~n~~Gsy~C~C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2          10 PCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred             CCC--CEeecCCCCEEEeCCCCCEECCCCCeec
Confidence            364  37999999999999999984332 3454

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=97.32  E-value=8.2e-05  Score=38.33  Aligned_cols=35  Identities=23%  Similarity=0.499  Sum_probs=29.8

Q ss_pred             cccchhh-CCCCCEEeeC-CCCeeeeCCC-CCccCCCCCCc
Q psy2457          28 IRLSDSQ-CGVNSECNVR-NHIPVCSCPP-GYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~~~-C~~~~~C~~~-~~~~~C~c~~-g~~~~~~~~c~   65 (189)
                      +++|... |.++++|+.. .++|.|.|.. ||.|.   .|+
T Consensus         2 id~C~~nPC~ngG~C~~~~~~~y~C~C~~~G~~G~---~Ce   39 (42)
T d1q4ga2           2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGP---NCT   39 (42)
T ss_dssp             CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETT---TTC
T ss_pred             CccCcCCCCCCCCEeeeCCCCCEEEECCCCCcCCc---CcC
Confidence            5778877 9999999975 5789999986 89999   885

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=6.7e-05  Score=39.88  Aligned_cols=29  Identities=24%  Similarity=0.560  Sum_probs=24.6

Q ss_pred             cCCCCCEeee--CCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCTA--RNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~  169 (189)
                      +|.++|+|+.  ...+|.|.|+.||+|.++.
T Consensus        11 ~C~ngG~C~~~~~~~~~~C~C~~gy~G~~Ce   41 (48)
T d1nqlb_          11 YCLHDGVCMYIEALDKYACNCVVGYIGERCQ   41 (48)
T ss_dssp             EECTTCEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             CCCCCcEEeeeCCCCCeEEeCCCCcccCCCC
Confidence            6889999975  3468999999999999974

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=8.3e-05  Score=37.86  Aligned_cols=30  Identities=23%  Similarity=0.376  Sum_probs=25.1

Q ss_pred             cccchhh---CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          28 IRLSDSQ---CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        28 ~~~c~~~---C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +++|...   |.+  .|++++++|.|.|++||...
T Consensus         2 ~neC~~~nggC~h--~C~n~~g~~~C~C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGCSS--EEEECSSSEEEECCTTCCEE
T ss_pred             cccCCCCCCCCcC--EEEcCCCCEEEECCCCCEEC
Confidence            4677655   876  99999999999999999764

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=8.2e-05  Score=38.14  Aligned_cols=30  Identities=23%  Similarity=0.435  Sum_probs=24.4

Q ss_pred             cccchhh--CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          28 IRLSDSQ--CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        28 ~~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      +++|..+  |.+  .|++++|+|.|.|++||...
T Consensus         1 idEC~~~~~C~~--~C~n~~Gsy~C~C~~Gy~L~   32 (41)
T d1i0ua2           1 IDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD   32 (41)
T ss_dssp             CCTTTTTTSCSS--CEECSSSCCEECCCTTEEEC
T ss_pred             CccCCCCCCCCC--EeECCCCCEEeECCCCCeEC
Confidence            3566554  764  89999999999999999865

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00021  Score=36.56  Aligned_cols=28  Identities=32%  Similarity=0.823  Sum_probs=24.6

Q ss_pred             CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.++++|+..  ...|+|.|++||.|.   .|+
T Consensus         6 C~ngG~C~~~~~~~~y~C~C~~g~~G~---~Ce   35 (41)
T d1tpga1           6 CFNGGTCQQALYFSDFVCQCPEGFAGK---SCE   35 (41)
T ss_dssp             SCTTCEEEEESSSSCEEEECCTTCBSS---SCC
T ss_pred             CCCCCEEecCCCCCCeEECCCCCCCCC---CcC
Confidence            8889999975  357999999999999   996

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.17  E-value=9.9e-05  Score=37.52  Aligned_cols=29  Identities=38%  Similarity=0.811  Sum_probs=25.5

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccCCCCCC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGDPLTQC   64 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~~~~~c   64 (189)
                      |..++.|++++++|.|.|.+||.+.+. .|
T Consensus         9 C~~~A~C~Nt~Gsy~C~C~~Gy~GdG~-~C   37 (40)
T d1gl4a2           9 CSVHAECRDYATGFCCRCVANYTGNGR-QC   37 (40)
T ss_dssp             SCTTEEEEECSSCEEEEECTTEEECSS-SE
T ss_pred             CCCCCEeecCCCCeEeECCCCCcCCCC-Ee
Confidence            777899999999999999999998754 45

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00021  Score=40.24  Aligned_cols=35  Identities=29%  Similarity=0.719  Sum_probs=28.9

Q ss_pred             cccchhh-CCCCCEEe-----eCCCCeeeeCCCCCccCCCCCCc
Q psy2457          28 IRLSDSQ-CGVNSECN-----VRNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        28 ~~~c~~~-C~~~~~C~-----~~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .++|... |.++++|+     +..+.|.|.|+.||.|.   .|+
T Consensus         6 c~ec~~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~---~Ce   46 (63)
T d1haea_           6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA---RCT   46 (63)
T ss_dssp             CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEEST---TSC
T ss_pred             CCCCcCCcCCCCCEEeecccccCCCCEEeECCCCCCCC---CcC
Confidence            4667766 99999995     34578999999999999   996

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00023  Score=34.39  Aligned_cols=28  Identities=25%  Similarity=0.773  Sum_probs=22.7

Q ss_pred             CCccc--cCCCCCEeeeCCCCeeeeCCCCCc
Q psy2457         136 KACTS--QCGINAQCTARNHVATCSCPAGYQ  164 (189)
Q Consensus       136 ~~c~~--~C~~~~~C~~~~g~~~C~C~~G~~  164 (189)
                      |+|+.  +|.+ ++|.|..|+|.|.|..||.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFe   31 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFE   31 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSC
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcC
Confidence            34443  5765 7999999999999999996

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.88  E-value=0.00064  Score=36.21  Aligned_cols=33  Identities=33%  Similarity=0.626  Sum_probs=27.1

Q ss_pred             CEeeeCCCCeeeeCCCCCcc-CCcccCeecCCcc
Q psy2457         146 AQCTARNHVATCSCPAGYQG-DALSRCYPAETTS  178 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~~G~~g-~~~~~c~~~~~~~  178 (189)
                      ..|++..++|+|.|++||+. ..-.+|.++.+++
T Consensus        11 ~~C~~~~g~~~C~C~~Gy~L~~D~~tC~~~~~~p   44 (50)
T d1autl2          11 HYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKFP   44 (50)
T ss_dssp             SEEEECSSSEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             cEeecCCCCeEEECCCCCEECCCCCccccCCCCC
Confidence            37999999999999999994 3446799888765

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.85  E-value=0.00038  Score=35.49  Aligned_cols=34  Identities=26%  Similarity=0.627  Sum_probs=28.0

Q ss_pred             ccchhh-CCCCCEEeeC-CCCeeeeCC-CCCccCCCCCCc
Q psy2457          29 RLSDSQ-CGVNSECNVR-NHIPVCSCP-PGYTGDPLTQCR   65 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~~-~~~~~C~c~-~g~~~~~~~~c~   65 (189)
                      ++|... |.++++|++. .++|+|.|+ +||.|.   .|+
T Consensus         2 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~gy~G~---~Ce   38 (41)
T d1cvua2           2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGE---NCT   38 (41)
T ss_dssp             CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETT---TTC
T ss_pred             CcCcCCCCCCCCEEEECCCCCEEEeCcCCCcCCc---CcC
Confidence            456666 9999999875 578999996 699999   885

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.00066  Score=36.34  Aligned_cols=33  Identities=27%  Similarity=0.666  Sum_probs=26.9

Q ss_pred             CEeeeCCCCeeeeCCCCCc-cCCcccCeecCCcc
Q psy2457         146 AQCTARNHVATCSCPAGYQ-GDALSRCYPAETTS  178 (189)
Q Consensus       146 ~~C~~~~g~~~C~C~~G~~-g~~~~~c~~~~~~~  178 (189)
                      ..|.+.+++|.|.|++||+ ...-.+|.++..++
T Consensus        12 h~C~n~~g~~~C~C~~Gy~L~~D~~tC~~~~~~p   45 (51)
T d2p3ua1          12 QFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP   45 (51)
T ss_dssp             SEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred             cEeecCCCCeEeEcCCCCEECCCCCccccCCccC
Confidence            3799999999999999999 44446799888765

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.63  E-value=0.00045  Score=35.99  Aligned_cols=21  Identities=29%  Similarity=0.517  Sum_probs=19.2

Q ss_pred             CEEeeCCCCeeeeCCCCCccC
Q psy2457          39 SECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        39 ~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      ..|+|++|+|.|.|+.||...
T Consensus        16 ~~C~Nt~Gsy~C~C~~Gy~l~   36 (45)
T d1szba2          16 HHCHNHLGGFYCSCRAGYVLH   36 (45)
T ss_dssp             SEEEEETTEEEEECCTTEEEC
T ss_pred             CCCccCCCCeEEECCCCCeEC
Confidence            499999999999999999855

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.63  E-value=0.00051  Score=35.80  Aligned_cols=21  Identities=29%  Similarity=0.398  Sum_probs=19.0

Q ss_pred             CEEeeCCCCeeeeCCCCCccC
Q psy2457          39 SECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        39 ~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      ..|+|++++|+|.|++||...
T Consensus        16 ~~C~Nt~gsy~C~C~~Gy~L~   36 (45)
T d1nt0a3          16 HYCHNYLGGYYCSCRVGYILH   36 (45)
T ss_dssp             SEEEEETTEEEEECCTTEEEC
T ss_pred             CEeecCCCCEEEeCCCCCEEC
Confidence            499999999999999999854

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00069  Score=34.68  Aligned_cols=23  Identities=39%  Similarity=0.658  Sum_probs=20.6

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.+  .|++++++|.|.|+.||...
T Consensus        11 C~~--~C~n~~Gsy~C~C~~Gy~L~   33 (42)
T d1nzia2          11 CSH--FCNNFIGGYFCSCPPEYFLH   33 (42)
T ss_dssp             SSS--EEEEETTEEEEECCTTCEEC
T ss_pred             CCC--EeecCCCCEEEeCCCCCEEC
Confidence            665  99999999999999999865

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.47  E-value=0.00054  Score=36.70  Aligned_cols=32  Identities=31%  Similarity=0.694  Sum_probs=26.3

Q ss_pred             EeeeCCCCeeeeCCCCCc-cCCcccCeecCCcc
Q psy2457         147 QCTARNHVATCSCPAGYQ-GDALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~g~~~C~C~~G~~-g~~~~~c~~~~~~~  178 (189)
                      .|++..++|.|.|++||+ ...-.+|.++.+++
T Consensus        11 ~C~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_          11 FCREERSEVRCSCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             CCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred             EeEcCCCcEEeEcCCCCEECCCCCccccCCccC
Confidence            578899999999999998 44446799998875

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00088  Score=34.94  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=21.8

Q ss_pred             cCCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+ |.|.  .....+.|.|+.||.|+++.
T Consensus        13 yC~n-G~C~~~~~~~~~~C~C~~gY~G~RCe   42 (46)
T d1k36a_          13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             SCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred             cCcC-CEEEEeCCCCccEeECCCCceecCce
Confidence            4776 6674  35567999999999999964

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0011  Score=35.17  Aligned_cols=29  Identities=21%  Similarity=0.435  Sum_probs=23.5

Q ss_pred             cCCCCCEee-eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT-ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~-~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+++.|. .....+.|.|+.||+|+++.
T Consensus        15 yC~nGgcc~~~~~~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_          15 YCIKGRCRFVVAEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             SCTTCCEEEETTTTEEEECCCTTEETTTTC
T ss_pred             CccCCeEEEeCCCCCcEeECCCCCeeCCCc
Confidence            488888884 45567899999999999963

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.00  E-value=0.0011  Score=35.10  Aligned_cols=29  Identities=21%  Similarity=0.428  Sum_probs=23.1

Q ss_pred             cCCCCCEee-eCCCCeeeeCCCCCccCCcc
Q psy2457         141 QCGINAQCT-ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       141 ~C~~~~~C~-~~~g~~~C~C~~G~~g~~~~  169 (189)
                      .|.+++.|. .....+.|.|+.||.|+++.
T Consensus        14 yClnGgcc~~~~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_          14 FCFHGTCRFLVQEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             SSTTEEEEEETTTTEEEEEECTTEESTTSC
T ss_pred             EeeCCeEEecCCCCCcEeECCCCCEecCCc
Confidence            477777773 45568899999999999964

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.97  E-value=0.004  Score=33.41  Aligned_cols=33  Identities=30%  Similarity=0.598  Sum_probs=26.3

Q ss_pred             cchhh-CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457          30 LSDSQ-CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        30 ~c~~~-C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      +|... |.++++|+..  ...|+|.|++||.|.   .|+
T Consensus         8 ~c~~~~C~NgG~C~~~~~~~~~~C~C~~gy~G~---~Ce   43 (53)
T d3egfa_           8 SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD---RCQ   43 (53)
T ss_dssp             TTSSCCSCSSCEEEEESSSSCEEEECCTTCCSS---SSC
T ss_pred             CCCCCCCCCCcEeeccCCCCCeEeECCCCCcCC---CCc
Confidence            34444 8889999854  357999999999999   896

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0023  Score=33.64  Aligned_cols=34  Identities=29%  Similarity=0.657  Sum_probs=26.7

Q ss_pred             ccchhh-CCCCCEEeeC--CCCeeeeCCCCCccCCCCCCc
Q psy2457          29 RLSDSQ-CGVNSECNVR--NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        29 ~~c~~~-C~~~~~C~~~--~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      .+|... |.++++|+..  ...|+|.|+.||.|.   .|+
T Consensus         5 ~~c~~~~C~ngG~C~~~~~~~~~~C~C~~gy~G~---~Ce   41 (48)
T d1nqlb_           5 PLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGE---RCQ   41 (48)
T ss_dssp             CSTTCCEECTTCEEEEETTTTEEEEEECTTEEST---TSC
T ss_pred             CCCCCCCCCCCcEEeeeCCCCCeEEeCCCCcccC---CCC
Confidence            344444 8889999864  357999999999999   896

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.51  E-value=0.0087  Score=28.93  Aligned_cols=28  Identities=21%  Similarity=0.697  Sum_probs=22.1

Q ss_pred             CCCCCEeeeC---CCCeeeeCCCCCccCCcc
Q psy2457         142 CGINAQCTAR---NHVATCSCPAGYQGDALS  169 (189)
Q Consensus       142 C~~~~~C~~~---~g~~~C~C~~G~~g~~~~  169 (189)
                      |+++|+|+..   ..-.+|.||.+|.|+++.
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            7778888753   345589999999999975

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.0086  Score=32.55  Aligned_cols=32  Identities=28%  Similarity=0.681  Sum_probs=25.5

Q ss_pred             EeeeCC-CCeeeeCCCCCc-cCCcccCeecCCcc
Q psy2457         147 QCTARN-HVATCSCPAGYQ-GDALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~-g~~~C~C~~G~~-g~~~~~c~~~~~~~  178 (189)
                      .|++.. ++|.|.|++||+ ...-.+|.++.+|+
T Consensus        13 ~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fp   46 (57)
T d1rfnb_          13 FCKNSADNKVVCSCTEGYRLAENQKSCEPAVPFP   46 (57)
T ss_dssp             EEEECTTSCEEEECCTTEEECTTSSSEEECSSSC
T ss_pred             EeeeCCCCCeEeECCCCCEECCCCCccccCCCcC
Confidence            688876 489999999999 44446799988765

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.021  Score=27.32  Aligned_cols=29  Identities=21%  Similarity=0.448  Sum_probs=23.0

Q ss_pred             ccchhh--CCCCCEEeeCCCCeeeeCCCCCcc
Q psy2457          29 RLSDSQ--CGVNSECNVRNHIPVCSCPPGYTG   58 (189)
Q Consensus        29 ~~c~~~--C~~~~~C~~~~~~~~C~c~~g~~~   58 (189)
                      ++|+..  |.+ ++|.|..+.|.|.|..||..
T Consensus         2 dECsignpCGn-GTCtNviGgFec~C~~GFep   32 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECTCEEGFEP   32 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEECCSSSSCC
T ss_pred             CccccCCccCC-ceeeecccceEEeecCCcCC
Confidence            345444  764 89999999999999999973

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.023  Score=30.26  Aligned_cols=32  Identities=22%  Similarity=0.521  Sum_probs=24.4

Q ss_pred             EeeeCCC-CeeeeCCCCCc-cCCcccCeecCCcc
Q psy2457         147 QCTARNH-VATCSCPAGYQ-GDALSRCYPAETTS  178 (189)
Q Consensus       147 ~C~~~~g-~~~C~C~~G~~-g~~~~~c~~~~~~~  178 (189)
                      .|.+..+ .|.|.|+.||+ .....+|.+...++
T Consensus        12 ~C~~~~~~~~~C~C~~Gy~L~~D~~tC~~~~~fp   45 (53)
T d2bz6l1          12 YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP   45 (53)
T ss_dssp             EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred             EeeeCCCCCEEeECCCCCEECCCCCcccCCCccC
Confidence            6877765 58899999998 44446698887764

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.97  E-value=0.037  Score=29.00  Aligned_cols=22  Identities=27%  Similarity=0.667  Sum_probs=15.7

Q ss_pred             eCCCCeeeeCCCCCccCC-cccC
Q psy2457         150 ARNHVATCSCPAGYQGDA-LSRC  171 (189)
Q Consensus       150 ~~~g~~~C~C~~G~~g~~-~~~c  171 (189)
                      +..++|.|.|+.||+... -++|
T Consensus        26 n~~~~y~C~C~~G~~L~~D~~tC   48 (50)
T d1ijqa2          26 PHSPKFTCACPDGMLLARDMRSC   48 (50)
T ss_dssp             TTCCSEEEECCTTCEECTTSSCE
T ss_pred             cCCCCEEEeCCCCCEECCCCCcc
Confidence            345799999999998433 3345

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.66  E-value=0.04  Score=28.86  Aligned_cols=28  Identities=32%  Similarity=0.726  Sum_probs=23.2

Q ss_pred             CCCCCEEeeC-CCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVR-NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~-~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+++.|... ...+.|.|+.||.|.   .|+
T Consensus        16 C~nGgcc~~~~~~~~~C~C~~gy~G~---rCe   44 (50)
T d1ioxa_          16 CIKGRCRFVVAEQTPSCVCDEGYIGA---RCE   44 (50)
T ss_dssp             CTTCCEEEETTTTEEEECCCTTEETT---TTC
T ss_pred             ccCCeEEEeCCCCCcEeECCCCCeeC---CCc
Confidence            8888888654 466899999999999   896

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.048  Score=28.55  Aligned_cols=23  Identities=35%  Similarity=0.691  Sum_probs=20.5

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.+  .|++++++|+|.|+.||...
T Consensus         9 C~~--~C~~~~g~~~C~C~~Gy~L~   31 (50)
T d1autl2           9 CTH--YCLEEVGWRRCSCAPGYKLG   31 (50)
T ss_dssp             CSS--EEEECSSSEEEECCTTEEEC
T ss_pred             ccc--EeecCCCCeEEECCCCCEEC
Confidence            665  99999999999999999865

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.51  E-value=0.016  Score=29.06  Aligned_cols=27  Identities=26%  Similarity=0.754  Sum_probs=20.6

Q ss_pred             CCCCCEee--eCCCCeeeeCCCCCccCCcc
Q psy2457         142 CGINAQCT--ARNHVATCSCPAGYQGDALS  169 (189)
Q Consensus       142 C~~~~~C~--~~~g~~~C~C~~G~~g~~~~  169 (189)
                      |.+ |+|.  .....+.|.|..||+|+++.
T Consensus        10 Cih-G~C~~i~~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_          10 CIH-GECKYVKELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             CSS-EEECCBGGGTBCCEEECTTEESTTCC
T ss_pred             eEC-cEEeecCcCCCceeECCCCCeecCcc
Confidence            665 7784  34457789999999999963

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.76  E-value=0.043  Score=28.19  Aligned_cols=27  Identities=33%  Similarity=0.774  Sum_probs=21.3

Q ss_pred             CCCCCEEee--CCCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNV--RNHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~--~~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+ |.|..  ....+.|.|+.||.|.   +|+
T Consensus        14 C~n-G~C~~~~~~~~~~C~C~~gY~G~---RCe   42 (46)
T d1k36a_          14 CLH-GQCIYLVDMSQNYCRCEVGYTGV---RCE   42 (46)
T ss_dssp             CSS-EEEEEETTTTEEEEEECTTCSST---TSC
T ss_pred             CcC-CEEEEeCCCCccEeECCCCceec---Cce
Confidence            776 77753  3467899999999999   885

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.46  E-value=0.055  Score=28.45  Aligned_cols=23  Identities=39%  Similarity=0.810  Sum_probs=20.5

Q ss_pred             CCCCCEEeeCCCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVRNHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~~~~~~C~c~~g~~~~   59 (189)
                      |.+  .|++++++|.|.|+.||...
T Consensus        10 C~h--~C~n~~g~~~C~C~~Gy~L~   32 (51)
T d2p3ua1          10 CDQ--FCHEEQNSVVCSCARGYTLA   32 (51)
T ss_dssp             CSS--EEEEETTEEEEECCTTEEEC
T ss_pred             ccc--EeecCCCCeEeEcCCCCEEC
Confidence            765  99999999999999999865

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.03  Score=29.26  Aligned_cols=28  Identities=29%  Similarity=0.714  Sum_probs=22.2

Q ss_pred             CCCCCEEeeC-CCCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVR-NHIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~-~~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+++.|... ...+.|.|+.||.|.   +|+
T Consensus        15 ClnGgcc~~~~~~~~~C~C~~gy~G~---RCe   43 (49)
T d1moxc_          15 CFHGTCRFLVQEDKPACVCHSGYVGA---RCE   43 (49)
T ss_dssp             STTEEEEEETTTTEEEEEECTTEEST---TSC
T ss_pred             eeCCeEEecCCCCCcEeECCCCCEec---CCc
Confidence            7776767544 467899999999999   896

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.49  E-value=0.22  Score=23.83  Aligned_cols=28  Identities=29%  Similarity=0.844  Sum_probs=22.7

Q ss_pred             CCCCCEEeeCC---CCeeeeCCCCCccCCCCCCc
Q psy2457          35 CGVNSECNVRN---HIPVCSCPPGYTGDPLTQCR   65 (189)
Q Consensus        35 C~~~~~C~~~~---~~~~C~c~~g~~~~~~~~c~   65 (189)
                      |.+++.|+...   +...|.|+.+|.|.   +|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~---HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQ---HCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEEST---TSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCce---eEE
Confidence            66788998753   55679999999999   886

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.11  E-value=0.18  Score=26.18  Aligned_cols=23  Identities=26%  Similarity=0.551  Sum_probs=18.4

Q ss_pred             CCCCCEEeeC------CCCeeeeCCCCCccC
Q psy2457          35 CGVNSECNVR------NHIPVCSCPPGYTGD   59 (189)
Q Consensus        35 C~~~~~C~~~------~~~~~C~c~~g~~~~   59 (189)
                      |.+  .|+..      .++|.|.|+.||...
T Consensus        14 C~h--~Cl~~p~~~n~~~~y~C~C~~G~~L~   42 (50)
T d1ijqa2          14 CQY--LCLPAPQINPHSPKFTCACPDGMLLA   42 (50)
T ss_dssp             CSS--EEEECCCCSTTCCSEEEECCTTCEEC
T ss_pred             CcC--ccCCCcCcccCCCCEEEeCCCCCEEC
Confidence            776  89754      468999999999865

>d1dx5i1 g.3.11.1 (I:345-387) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.76  E-value=0.28  Score=24.02  Aligned_cols=27  Identities=26%  Similarity=0.773  Sum_probs=18.3

Q ss_pred             CCccc-cCCCCCEeeeC-CCCeeeeCCCCCc
Q psy2457         136 KACTS-QCGINAQCTAR-NHVATCSCPAGYQ  164 (189)
Q Consensus       136 ~~c~~-~C~~~~~C~~~-~g~~~C~C~~G~~  164 (189)
                      |.|.. +|..  +|... .++|+|.|..||.
T Consensus         5 DPCf~~~CE~--qCqP~~~~~Y~CiCaeGFa   33 (43)
T d1dx5i1           5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFA   33 (43)
T ss_dssp             CGGGGCCCSS--EEEECSSSCEEEECCTTEE
T ss_pred             ccccCCCcce--eeeeCCCCcceEEeccccc
Confidence            44443 5654  57544 4699999999985

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.79  E-value=0.28  Score=25.97  Aligned_cols=32  Identities=25%  Similarity=0.697  Sum_probs=21.1

Q ss_pred             CCCCCEeee--CCCCeee-eCCCCCccCCcccCee
Q psy2457         142 CGINAQCTA--RNHVATC-SCPAGYQGDALSRCYP  173 (189)
Q Consensus       142 C~~~~~C~~--~~g~~~C-~C~~G~~g~~~~~c~~  173 (189)
                      |..++.|..  ..+...| .|++||+|.++..|.+
T Consensus         3 C~~~~~c~~~~~~~~~vC~~C~~~~~G~~Ce~C~~   37 (55)
T d1kloa1           3 CPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDD   37 (55)
T ss_dssp             SCTTCCEEECSSSCCEEECSCCTTEESTTSCEECT
T ss_pred             CcCCCccceeCCCCCEEcCCCCCCCccCcccccCC
Confidence            444455532  3455677 5999999999876643

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.33  E-value=0.1  Score=23.81  Aligned_cols=14  Identities=21%  Similarity=0.631  Sum_probs=12.3

Q ss_pred             eeeCCCCCccCCcc
Q psy2457         156 TCSCPAGYQGDALS  169 (189)
Q Consensus       156 ~C~C~~G~~g~~~~  169 (189)
                      .|.|.+||+|+.++
T Consensus        15 ~C~C~~gw~G~~CN   28 (31)
T d1jv2b4          15 DCLCDSDWTGYYCN   28 (31)
T ss_dssp             TTCCCTTEESSSSC
T ss_pred             ceEccCCccccccc
Confidence            48899999999986