Psyllid ID: psy2547
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1807 | 2.2.26 [Sep-21-2011] | |||||||
| P11046 | 1788 | Laminin subunit beta-1 OS | yes | N/A | 0.950 | 0.960 | 0.472 | 0.0 | |
| P07942 | 1786 | Laminin subunit beta-1 OS | yes | N/A | 0.967 | 0.978 | 0.420 | 0.0 | |
| P02469 | 1786 | Laminin subunit beta-1 OS | yes | N/A | 0.970 | 0.981 | 0.415 | 0.0 | |
| P15800 | 1801 | Laminin subunit beta-2 OS | yes | N/A | 0.954 | 0.957 | 0.410 | 0.0 | |
| Q61292 | 1799 | Laminin subunit beta-2 OS | no | N/A | 0.954 | 0.958 | 0.405 | 0.0 | |
| P55268 | 1798 | Laminin subunit beta-2 OS | no | N/A | 0.957 | 0.962 | 0.405 | 0.0 | |
| A4D0S4 | 1761 | Laminin subunit beta-4 OS | no | N/A | 0.934 | 0.958 | 0.365 | 0.0 | |
| Q8JHV6 | 1827 | Laminin subunit beta-4 OS | no | N/A | 0.288 | 0.285 | 0.515 | 1e-159 | |
| Q13751 | 1172 | Laminin subunit beta-3 OS | no | N/A | 0.282 | 0.436 | 0.398 | 1e-115 | |
| Q61087 | 1168 | Laminin subunit beta-3 OS | no | N/A | 0.279 | 0.432 | 0.400 | 1e-114 |
| >sp|P11046|LAMB1_DROME Laminin subunit beta-1 OS=Drosophila melanogaster GN=LanB1 PE=1 SV=4 | Back alignment and function desciption |
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Score = 1654 bits (4282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 849/1796 (47%), Positives = 1155/1796 (64%), Gaps = 79/1796 (4%)
Query: 35 CERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNP 94
CER SCYPATGNLLIGREN+L ASSTCGLH FCI+S L+DKK CF C++ ++P
Sbjct: 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKK-CFLCDTREETKHDP 107
Query: 95 AFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAML 154
+H+I I+Y T P T +WWQSENG EN TIQLD+EAEFHFTHLII F TFRPAAM
Sbjct: 108 YKNHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMY 167
Query: 155 IERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRKLTDVYCESRYSSNNPSSGGEVILRV 214
IERS DFG+TW +YRYFA DC +SFPG+P L +TDV C SRYS+ PS GEVI RV
Sbjct: 168 IERSFDFGQTWHIYRYFAYDCKESFPGVPT-VLENITDVMCTSRYSNVEPSRNGEVIFRV 226
Query: 215 LPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKYYYAITQMIV 274
LPP+++ + DPY+ VQN +KMTNLRI TKLH LGD+LLD+R + +EKYYY I+ M+V
Sbjct: 227 LPPNINVT--DPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVV 284
Query: 275 RGSCSCYGHASRCLPI----SEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPA 330
RGSCSCYGHAS+CLP+ S+AD + MVHGRCECTHNT+G+NCE+C DF+NDLPWKPA
Sbjct: 285 RGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPA 344
Query: 331 FGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKD 390
FG +TNACK+C CN+H+ CHFDEAV+ ++G +SGGVCD+C HNT G++CE C YFY+D
Sbjct: 345 FGKKTNACKKCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRD 404
Query: 391 PNKEFSDPEVCLRCDCDPGGSLDDGICDPYTD--DVLVSGKCHCKPNVGGRRCDMCKDGF 448
P ++ + VC CDCDP GS DDGICD + + V+G CHCK V GRRC+ CKDG+
Sbjct: 405 PEQDITSERVCQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGY 464
Query: 449 WNFNETNPNGCEPCTCNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEE 508
WN NP GCEPCTCN GT+N+ GC TG+C CK+ V G+DCNQC+P +GLSES E
Sbjct: 465 WNLQSDNPEGCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPE 524
Query: 509 YGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYSPPYDNFLYEAENANC 568
GC C+CD G SYDN CDVISGQC+C+PH +GR+CS P+Q+Y+ P ++EAE
Sbjct: 525 -GCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPE-VHEAE---- 578
Query: 569 KTDKCVVEIRQPLGGGNEN----------TWTGPGFMKGFENTGLVFEIDNIPTPMDYDI 618
D+C+ G N N ++TG GF + EN+ LVF + +IP M YD
Sbjct: 579 VVDECISY------GANGNCSLVAETPDGSFTGIGFTRVPENSELVFTVGDIPRSMPYDA 632
Query: 619 VVRYEPVTNTDWENVDVIVEREGNVDINGPCGNAVPQDDIKRTRLPVG----SRAVKVYP 674
V+RY+ + DWEN + + R VD G CG TR+P SR V
Sbjct: 633 VIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAAATS-SETRIPFSLPDRSRQVVALN 691
Query: 675 PACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQSIPFFQGPENFE-RAREF 733
CLE GK YK + F + + P+A+IL+DS+ L+P I P FQG + R +++
Sbjct: 692 EVCLEAGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIRKKDY 751
Query: 734 DHYRCGDS-YITVYRGVPIPEACKKQHYSIGMYVHHGANECDCDPTGSTSKYCDQLGGNC 792
+ Y C S Y Y+ P C+ + ++VH GA+ C+C+PTGS SK C+ GG C
Sbjct: 752 EKYNCKSSLYDMNYKSDP---KCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYC 808
Query: 793 VCKPNVVGRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECD 852
CKPNVVGR+CD+CAPGTYGFGPEGCKACDCN +G+ D CD+++GQC+C TYGREC+
Sbjct: 809 QCKPNVVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECN 868
Query: 853 QCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDI 912
QC PGYWN+P C+ C CNGHA CD GTCI C++ST G +C+ C++GYYG+P G +I
Sbjct: 869 QCQPGYWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEI 928
Query: 913 PCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGS 972
CRPC CP TV SGL++AD C LD R+ +++C C+EGY G+RC+ C DN+FGNP + GG+
Sbjct: 929 GCRPCRCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNP-DNGGT 987
Query: 973 CEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNI 1032
C C+CSNN DL GNCD TG CL+C Y T GDHC++CK GFFG+AL+QNC +C C+
Sbjct: 988 CSKCECSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDF 1047
Query: 1033 LGIDHSKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTEC 1092
LG +++ CDR TGQCPCLPNV GV CD+C +NHWKIASG GCE C+CDPIG++ +C
Sbjct: 1048 LGTNNTIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALH-EQC 1106
Query: 1093 NEYTGQCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQG 1152
N YTGQCQCK GFGGR C+QCQ ++WGNPN +C PC+CD G+A QC + G CVCH+G
Sbjct: 1107 NSYTGQCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEG 1166
Query: 1153 IGGVRCDTCARGYIGTAPDCSPCGECFDNWDSILRGLADQTTKVITDASNIKQTGASGAY 1212
IGG +C+ CARGYIG P CSPCGECF+NWD IL L D TT I A IKQ GA+GAY
Sbjct: 1167 IGGYKCNECARGYIGQFPHCSPCGECFNNWDLILSALEDATTATILRAKEIKQVGATGAY 1226
Query: 1213 TKEFELLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQIMNNEDP-NGVGKTLGNTT 1271
T EF L+KK++ ++ L++NT+ S D+ + ++ Q+ + + + L +
Sbjct: 1227 TSEFSELDKKLQHIRNLLQNTSVSLVDIEKLDYETQSLRDQLQASHGRLSETEQNLDDIY 1286
Query: 1272 QRINLARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQS 1331
++L+ + L L + + + + LKEN LQE+N+EGAL LTR A++ L
Sbjct: 1287 NSLSLSGVELESLQNHSRLVQQLSKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLK 1346
Query: 1332 TETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKNLPDLNELI 1391
E + ++ +R CKR ENL K + N K ++ ++TSL +P+LN +
Sbjct: 1347 DEANELASNTDRNCKRVENLSNKIQAE-ADDLANNNKLIEDYRAELTSLTSQIPELNNQV 1405
Query: 1392 CDKRGDPCDNLCGGAGCGKCGGMWCSNGTLSESNSAKDYAETSKKLINEKESKAEELRKH 1451
C K GDPCD+LCGGAGCG CGG LS + AK ++E + K+
Sbjct: 1406 CGKPGDPCDSLCGGAGCGHCGGF------LSCEHGAKTHSEEALKV-------------- 1445
Query: 1452 MIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDHAASVR 1511
AKD AET+ I K+ +A++ R +T AK + A AK ++ +
Sbjct: 1446 ---------AKD-AETA---ITSKKDQADQTIRALTQAKLNASEAYEKAKRGFEQSERYL 1492
Query: 1512 NKTAAYVASTSNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERANEINNV 1571
N+T A + N+ L+ F A+ ++ + ++ ++ +++ PE+I ++IN
Sbjct: 1493 NQTNANIKLAENLFIALNNFQENKTASPSESKELAQKTLDLDLKLEPEEIETLGDQINRA 1552
Query: 1572 IKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAE 1631
+ SL +++ I+ T DL + N+L+ AN TK AD ++ +V+ L A +Q A+
Sbjct: 1553 VSSLKNVEAIIYRTKPDLDRVNNLQSIANATKEKADKILDSANSVVESLAAADESQGKAK 1612
Query: 1632 VAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLKSIQAGFLQNGRSAM 1691
AIQ A +I A +DL +I + A+ +N T +V+ L ++++ +Q ++N R A
Sbjct: 1613 DAIQQANSNIELAGQDLEKIDEETYSAEAPANNTAQQVEKLAKKVQKLQNNIMKNDRDAK 1672
Query: 1692 DVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSV 1751
++ E +++ E A+ +A+ L+S T+ L +A S R R + LL +AS+L+V
Sbjct: 1673 EITKEAGSVKLEAMRARGEANNLQSATSATNQTLTDRASRSENARERAKQLLQRASKLTV 1732
Query: 1752 NTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKSNNYKNCVS 1807
+T AKLK LN+ + ++ ++ +L L I L K + + I ++ ++Y+ C +
Sbjct: 1733 DTNAKLKDLNDLQTVYLNKNQQLLRLQAEIGPLNKELNEHLIHIKERGSHYRQCYT 1788
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Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organization of cells into tissues during embryonic development by interacting with other extracellular matrix components. Drosophila melanogaster (taxid: 7227) |
| >sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=LAMB1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P02469|LAMB1_MOUSE Laminin subunit beta-1 OS=Mus musculus GN=Lamb1 PE=1 SV=3 | Back alignment and function description |
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| >sp|P15800|LAMB2_RAT Laminin subunit beta-2 OS=Rattus norvegicus GN=Lamb2 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q61292|LAMB2_MOUSE Laminin subunit beta-2 OS=Mus musculus GN=Lamb2 PE=2 SV=2 | Back alignment and function description |
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| >sp|P55268|LAMB2_HUMAN Laminin subunit beta-2 OS=Homo sapiens GN=LAMB2 PE=1 SV=2 | Back alignment and function description |
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| >sp|A4D0S4|LAMB4_HUMAN Laminin subunit beta-4 OS=Homo sapiens GN=LAMB4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8JHV6|LAMB4_DANRE Laminin subunit beta-4 OS=Danio rerio GN=lamb4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q13751|LAMB3_HUMAN Laminin subunit beta-3 OS=Homo sapiens GN=LAMB3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=Lamb3 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1807 | ||||||
| 321474022 | 1776 | hypothetical protein DAPPUDRAFT_300823 [ | 0.969 | 0.985 | 0.533 | 0.0 | |
| 91095063 | 1759 | PREDICTED: similar to AGAP001381-PA [Tri | 0.964 | 0.990 | 0.520 | 0.0 | |
| 270014771 | 1755 | hypothetical protein TcasGA2_TC005184 [T | 0.961 | 0.990 | 0.517 | 0.0 | |
| 242004311 | 1767 | Laminin beta-1 chain precursor, putative | 0.953 | 0.975 | 0.523 | 0.0 | |
| 156549170 | 1804 | PREDICTED: laminin subunit beta-1-like [ | 0.956 | 0.957 | 0.507 | 0.0 | |
| 350398691 | 2188 | PREDICTED: laminin subunit beta-1-like [ | 0.951 | 0.785 | 0.511 | 0.0 | |
| 340709968 | 1774 | PREDICTED: laminin subunit beta-1-like i | 0.951 | 0.969 | 0.512 | 0.0 | |
| 340709970 | 1803 | PREDICTED: laminin subunit beta-1-like i | 0.951 | 0.953 | 0.512 | 0.0 | |
| 328792916 | 1774 | PREDICTED: laminin subunit beta-1 [Apis | 0.951 | 0.969 | 0.510 | 0.0 | |
| 307180901 | 2183 | Laminin subunit beta-1 [Camponotus flori | 0.952 | 0.788 | 0.511 | 0.0 |
| >gi|321474022|gb|EFX84988.1| hypothetical protein DAPPUDRAFT_300823 [Daphnia pulex] | Back alignment and taxonomy information |
|---|
Score = 1957 bits (5070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 966/1812 (53%), Positives = 1249/1812 (68%), Gaps = 61/1812 (3%)
Query: 10 LCVVGLLVIFQVTYVTCQLPQPISSCERKSCYPATGNLLIGRENKLRASSTCGLHGNSTF 69
L ++ ++ T V Q P P CE+ SCYPATGNLL+GRE +L +SSTCGL +
Sbjct: 8 LVLIVVVATCLTTGVVSQRPHP---CEQSSCYPATGNLLLGREMRLSSSSTCGLQKKEKY 64
Query: 70 CIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQ 129
CIVS LEDKKKCF C+S P N+P+ SH I NI+Y P ++ SWWQ++NGVENV+IQ
Sbjct: 65 CIVSHLEDKKKCFWCDSRPEQVNSPS-SHHIQNILYRYTPTSRRRSWWQAQNGVENVSIQ 123
Query: 130 LDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRK 189
LD+EAEFHFTHLI+ FKTFRPAA+LIERS+DFG+TW++YRYFA +CA+SFPG+ R+ R
Sbjct: 124 LDLEAEFHFTHLIMTFKTFRPAALLIERSYDFGRTWKIYRYFAYNCAESFPGVSREPPRN 183
Query: 190 LTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHT 249
LT+V CESRYS PS+ GEVI RVLPP+L DPYS +VQNL+KMTNLR+NFTKLHT
Sbjct: 184 LTEVICESRYSGVAPSTEGEVIFRVLPPNLPID--DPYSQEVQNLLKMTNLRVNFTKLHT 241
Query: 250 LGDDLLDTRRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADTKPDMVHGRCECTHN 309
LGDDLLD R +IQ+KYYYAI M+VRGSCSCYGHASRCLP+ D + DMVHGRCECTHN
Sbjct: 242 LGDDLLDNREEIQDKYYYAIYDMVVRGSCSCYGHASRCLPLPGVDERTDMVHGRCECTHN 301
Query: 310 TQGLNCEKCIDFYNDLPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCD 369
T+GLNCE+C DFY+DLPW+PA G QTNACK+CNCN HS +CHFD AVY +TGRISGGVCD
Sbjct: 302 TKGLNCEQCEDFYHDLPWRPAIGRQTNACKRCNCNQHSDQCHFDPAVYEATGRISGGVCD 361
Query: 370 SCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDV--LVS 427
C HNT GRNCE+CK +FY+DP K SD +VCL CDCDP GSLDDGICD +D + +
Sbjct: 362 DCNHNTMGRNCEQCKAFFYQDPTKAISDADVCLPCDCDPRGSLDDGICDARSDPSGGVQA 421
Query: 428 GKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTINSQGCNKDTGDCTCKRN 487
G+CHCK V GRRCD C+ G+WNF E NP+GC+ C+CN+ GT +QGCN +G+C CKR
Sbjct: 422 GQCHCKRFVEGRRCDQCQHGYWNFTEENPDGCQVCSCNLLGTYENQGCNVYSGECVCKRY 481
Query: 488 VEGRDCNQCLPHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCSTP 547
V GRDC+QCLP WGLSE+ + GCK C+CDPG SYDNNCD+++GQCKC+PH +GRTCS P
Sbjct: 482 VTGRDCDQCLPEHWGLSEARD-GCKACECDPGGSYDNNCDLLTGQCKCRPHVTGRTCSQP 540
Query: 548 EQSYYSPPYDNFLYEAENANCKTDKCVVEIRQPLGGGNENTWTGPGFMKGFENTGLVFEI 607
EQ Y++ D +YEAE +D+ ++IR+P + +WTGPGF++ E++ + F +
Sbjct: 541 EQGYFAGLLDYKIYEAEYGGI-SDRAQLQIREPYRD-RDPSWTGPGFVRAVEDSSIQFTL 598
Query: 608 DNIPTPMDYDIVVRYEPVTNTDWENVDVIVEREGNVDINGPCGNAVPQD-------DIKR 660
D I M+YD+V+RYEP + WE+V V+VER G VD +GPC N Q +I R
Sbjct: 599 DAISQSMEYDLVIRYEPQLSGQWEDVRVVVERPGEVDPDGPCANQFNQQGPPSGGLEISR 658
Query: 661 TRLPVGSRAVKVYPPACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQSIPF 720
LP G+R +YPP CLE GKKY V L F ++ PSA++LIDSI ++P SIPF
Sbjct: 659 VSLPSGARHAVIYPPTCLETGKKYNVRLEFKSYDSNQETPSAAVLIDSITVVPRAGSIPF 718
Query: 721 FQG-PENFERAREFDHYRCGDSYITVYRGVPIPEACKKQHYSIGMYVHHGANECDCDPTG 779
G P R +EFDHYRC + +V + IPE CKK YSIG YV EC CDPTG
Sbjct: 719 LGGSPAADYRRQEFDHYRCAQYFYSVVK-TNIPEVCKKHLYSIGFYVLGSGFECQCDPTG 777
Query: 780 STSKYCDQLGGNCVCKPNVVGRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQ 839
S+S CD LGG C CKPNVVGRRCD+CAPGT+GFGPEGC C+CN VG+LDN CD +GQ
Sbjct: 778 SSSSICDSLGGQCSCKPNVVGRRCDQCAPGTFGFGPEGCSPCECNPVGSLDNFCDSGTGQ 837
Query: 840 CKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCI 899
C+CR TYGR CDQC PGYWN+P+CQRC CNGHADLCDS+TG C+ CR+ T ++C+RC+
Sbjct: 838 CRCRPNTYGRVCDQCQPGYWNFPSCQRCECNGHADLCDSRTGRCLDCRDFTTDDHCDRCL 897
Query: 900 NGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCL 959
+ YYGDPRLG+DIPCR CPCPGT++SG SYA C LD +QDVICEC+EGY G RCD C
Sbjct: 898 DSYYGDPRLGVDIPCRACPCPGTIDSGHSYAPRCSLDRETQDVICECQEGYAGPRCDVCA 957
Query: 960 DNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGN 1019
DNYFGNP+ GG C PC CSNN DL+ PGNC +G+CLQC ++TEG C+VC+ GFFG+
Sbjct: 958 DNYFGNPEVLGGQCRPCQCSNNIDLSRPGNCAGKSGECLQCLFNTEGFSCEVCQKGFFGD 1017
Query: 1020 ALEQNCTECTCNILGIDHS-KGP--CDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGC 1076
AL Q CT C CN+LG D S +GP C+R TGQCPCLPNV G+SCDRC +HWKIASG GC
Sbjct: 1018 ALSQQCTPCVCNLLGSDSSLEGPSVCNRQTGQCPCLPNVEGLSCDRCAVDHWKIASGEGC 1077
Query: 1077 EPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNFWGNP-NVECFPCDCDPSGS 1135
E C CDP+GS+ T+CNE+ GQC+C+ GFGGR+CDQC+ N+WGNP + C PC CDP GS
Sbjct: 1078 EACSCDPVGSLS-TQCNEFDGQCECREGFGGRKCDQCRANYWGNPSDNSCRPCLCDPLGS 1136
Query: 1136 ATSQCHQNNGTCVCHQGIGGVRCDTCARGYIGT-APDCSPCGECFDNWDSILRGLADQTT 1194
AT QCH G CVC G+GG +CD CARGY+G PDC PCGECFDNWD IL+ L QT
Sbjct: 1137 ATQQCHHATGACVCLPGMGGEKCDRCARGYVGAIVPDCQPCGECFDNWDRILQELRGQTE 1196
Query: 1195 KVITDASNIKQTGASGAYTKEFELLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQI 1254
+V+ A I++TGA+GAYT+EFE +E K+ DV+AL+ NTT S H+L+ + +K +
Sbjct: 1197 QVVVAAGQIRETGATGAYTREFETMENKLSDVRALLLNTTLSGHELSQLEELFSSIKTNL 1256
Query: 1255 -MNNEDPNGVGKTLGNTTQRINLARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGA 1313
M + +G+ T+ NTTQR+ LAL++L + L + LK NAT LQE NVEGA
Sbjct: 1257 TMAGQGMDGLDATVENTTQRVFSVVLALSNLRSKATDLQTAAQSLKNNATKLQEANVEGA 1316
Query: 1314 LELTRQAHDTSLKLKEQSTETEKQINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRL 1373
L LTR+A S K +++ T++ ++D+ERQ +RTE L+++ PQ + Q+ N L L
Sbjct: 1317 LNLTREARQRSQKAQDRVEFTQQPVSDSERQRRRTEALLSRVAPQLGESQQRNAADLADL 1376
Query: 1374 NEKITSLEKNLPDLNELICDKRGDPCDNLCGGAGCGKCGGMWCSNGTLSESNSAKDYAET 1433
++ +E++LP+LN+++CD RGDPCD+LCGG GCGKCG + C G+++++ +A A+
Sbjct: 1377 GGRLAVIERSLPELNDVVCDGRGDPCDSLCGGGGCGKCGALSCDEGSVTKAENALSLAKE 1436
Query: 1434 SKKLINEKESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQES 1493
++ ++ ++S++EE+ RG+ A+ E+
Sbjct: 1437 AEGILRNRQSESEEM----------------------------------MRGVRQAEVEA 1462
Query: 1494 HAANILAKEAYDHAASVRNKTAAYVASTSNITKQLDEFLNAPGATLADIRNISGLAVNKN 1553
AA ++A+EA A +N++ A A + Q+DE+L GA+ ADIR+++ ++K
Sbjct: 1463 EAARVMAREALLAAELAQNRSEAAKAEVDELMNQIDEYLEQSGASPADIRSLATDVLSKG 1522
Query: 1554 IQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKANDLKRKANLTKAGADSTKNTV 1613
I PEQI + A IN I SLT+ID IL ET+GDLA A LK +A+ KA A
Sbjct: 1523 ISLQPEQITDLARRINETISSLTNIDAILAETSGDLASAKALKDRADAAKAHAQGILTVA 1582
Query: 1614 QKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQ 1673
Q+++D L A+ AQD AE AIQTA DISAA L+QI ++ DAQ K++E+ +V+ L+
Sbjct: 1583 QQVLDSLAAAKAAQDKAEEAIQTADKDISAAELHLTQIASETADAQAKASESVQEVEGLR 1642
Query: 1674 ERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSG 1733
ERLK +Q ++N R + E + A + AS L + YQ L K SG
Sbjct: 1643 ERLKELQRKLIKNERDVKEAARESDVAASLASRAGQGASELDTAYQRALKALEEKTARSG 1702
Query: 1734 LKRARGQMLLNKASQLSVNTTAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCIN 1793
R R L +KA++LS + AK+++L E E + E LT+LS + + R+ +
Sbjct: 1703 DARERSARLQDKANRLSASVFAKVQELKEMEDEYLLHERRLTDLSDQVMAMNVRMTDYLQ 1762
Query: 1794 FIVDKSNNYKNC 1805
I D+S Y+ C
Sbjct: 1763 VISDRSEFYRTC 1774
|
Source: Daphnia pulex Species: Daphnia pulex Genus: Daphnia Family: Daphniidae Order: Diplostraca Class: Branchiopoda Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91095063|ref|XP_972560.1| PREDICTED: similar to AGAP001381-PA [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|270014771|gb|EFA11219.1| hypothetical protein TcasGA2_TC005184 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
| >gi|242004311|ref|XP_002423043.1| Laminin beta-1 chain precursor, putative [Pediculus humanus corporis] gi|212505974|gb|EEB10305.1| Laminin beta-1 chain precursor, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
| >gi|156549170|ref|XP_001607740.1| PREDICTED: laminin subunit beta-1-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
| >gi|350398691|ref|XP_003485275.1| PREDICTED: laminin subunit beta-1-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340709968|ref|XP_003393571.1| PREDICTED: laminin subunit beta-1-like isoform 1 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|340709970|ref|XP_003393572.1| PREDICTED: laminin subunit beta-1-like isoform 2 [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|328792916|ref|XP_001122457.2| PREDICTED: laminin subunit beta-1 [Apis mellifera] | Back alignment and taxonomy information |
|---|
| >gi|307180901|gb|EFN68709.1| Laminin subunit beta-1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1807 | ||||||
| FB|FBgn0261800 | 1788 | LanB1 "LanB1" [Drosophila mela | 0.930 | 0.940 | 0.460 | 0.0 | |
| WB|WBGene00002247 | 1790 | lam-1 [Caenorhabditis elegans | 0.966 | 0.975 | 0.417 | 0.0 | |
| ZFIN|ZDB-GENE-081030-4 | 1782 | lamb2 "laminin, beta 2 (lamini | 0.956 | 0.969 | 0.420 | 0.0 | |
| RGD|1306311 | 1834 | Lamb1 "laminin, beta 1" [Rattu | 0.961 | 0.947 | 0.411 | 0.0 | |
| UNIPROTKB|P07942 | 1786 | LAMB1 "Laminin subunit beta-1" | 0.895 | 0.905 | 0.428 | 0.0 | |
| UNIPROTKB|F1SAE9 | 1799 | LAMB1 "Uncharacterized protein | 0.956 | 0.961 | 0.411 | 0.0 | |
| MGI|MGI:96743 | 1786 | Lamb1 "laminin B1" [Mus muscul | 0.960 | 0.972 | 0.407 | 0.0 | |
| ZFIN|ZDB-GENE-021226-1 | 1785 | lamb1a "laminin, beta 1a" [Dan | 0.957 | 0.969 | 0.403 | 0.0 | |
| UNIPROTKB|F1MNT4 | 1798 | LAMB1 "Uncharacterized protein | 0.893 | 0.898 | 0.425 | 0.0 | |
| UNIPROTKB|E1BDK6 | 1802 | LAMB2 "Uncharacterized protein | 0.909 | 0.911 | 0.418 | 0.0 |
| FB|FBgn0261800 LanB1 "LanB1" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 4245 (1499.4 bits), Expect = 0., P = 0.
Identities = 809/1755 (46%), Positives = 1090/1755 (62%)
Query: 35 CERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNP 94
CER SCYPATGNLLIGREN+L ASSTCGLH FCI+S L+DKK CF C++ ++P
Sbjct: 49 CERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKK-CFLCDTREETKHDP 107
Query: 95 AFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAML 154
+H+I I+Y T P T +WWQSENG EN TIQLD+EAEFHFTHLII F TFRPAAM
Sbjct: 108 YKNHRIGQIIYKTKPGTNIPTWWQSENGKENATIQLDLEAEFHFTHLIITFTTFRPAAMY 167
Query: 155 IERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRKLTDVYCESRYSSNNPSSGGEVILRV 214
IERS DFG+TW +YRYFA DC +SFPG+P L +TDV C SRYS+ PS GEVI RV
Sbjct: 168 IERSFDFGQTWHIYRYFAYDCKESFPGVPTV-LENITDVMCTSRYSNVEPSRNGEVIFRV 226
Query: 215 LPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKYYYAITQMIV 274
LPP+++ + DPY+ VQN +KMTNLRI TKLH LGD+LLD+R + +EKYYY I+ M+V
Sbjct: 227 LPPNINVT--DPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVV 284
Query: 275 RGSCSCYGHASRCLPI----SEADTKPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPA 330
RGSCSCYGHAS+CLP+ S+AD + MVHGRCECTHNT+G+NCE+C DF+NDLPWKPA
Sbjct: 285 RGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPA 344
Query: 331 FGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKD 390
FG +TNACK+C CN+H+ CHFDEAV+ ++G +SGGVCD+C HNT G++CE C YFY+D
Sbjct: 345 FGKKTNACKKCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRD 404
Query: 391 PNKEFSDPEVCLRCDCDPGGSLDDGICDPYTD--DVLVSGKCHCKPNVGGRRCDMCKDGF 448
P ++ + VC CDCDP GS DDGICD + + V+G CHCK V GRRC+ CKDG+
Sbjct: 405 PEQDITSERVCQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGY 464
Query: 449 WNFNETNPNGCEPCTCNIQGTINSQGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEE 508
WN NP GCEPCTCN GT+N+ GC TG+C CK+ V G+DCNQC+P +GLSES E
Sbjct: 465 WNLQSDNPEGCEPCTCNPLGTLNNSGCVMRTGECKCKKYVTGKDCNQCMPETYGLSESPE 524
Query: 509 YGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYSPPYDNFLYEAENAN- 567
GC C+CD G SYDN CDVISGQC+C+PH +GR+CS P+Q+Y+ P ++EAE +
Sbjct: 525 -GCSLCNCDAGGSYDNYCDVISGQCRCRPHMTGRSCSQPKQNYFIPLLPE-VHEAEVVDE 582
Query: 568 C----KTDKCVVEIRQPLGGGNENTWTGPGFMKGFENTGLVFEIDNIPTPMDYDIVVRYE 623
C C + P G ++TG GF + EN+ LVF + +IP M YD V+RY+
Sbjct: 583 CISYGANGNCSLVAETPDG-----SFTGIGFTRVPENSELVFTVGDIPRSMPYDAVIRYQ 637
Query: 624 PVTNTDWENVDVIVEREGNVDINGPCGNAVPQDDIKRTRLPVG----SRAVKVYPPACLE 679
+ DWEN + + R VD G CG TR+P SR V CLE
Sbjct: 638 STSRGDWENAFITLVRPDQVDPEGGCGELAAATS-SETRIPFSLPDRSRQVVALNEVCLE 696
Query: 680 PGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQSIPFFQGPENFE-RAREFDHYRC 738
GK YK + F + + P+A+IL+DS+ L+P I P FQG + R ++++ Y C
Sbjct: 697 AGKVYKFRIYFERKRHDVDSPTATILVDSLTLIPRIDVTPIFQGSVLADIRKKDYEKYNC 756
Query: 739 GDS-YITVYRGVPIPEACKKQHYSIGMYVHHGANECDCDPTGSTSKYCDQLGGNCVCKPN 797
S Y Y+ P C+ + ++VH GA+ C+C+PTGS SK C+ GG C CKPN
Sbjct: 757 KSSLYDMNYKSDP---KCQNLDNILSVFVHDGASMCNCNPTGSLSKVCESNGGYCQCKPN 813
Query: 798 VVGRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPG 857
VVGR+CD+CAPGTYGFGPEGCKACDCN +G+ D CD+++GQC+C TYGREC+QC PG
Sbjct: 814 VVGRQCDQCAPGTYGFGPEGCKACDCNSIGSKDKYCDLITGQCQCVPNTYGRECNQCQPG 873
Query: 858 YWNYPTCQRCICNGHADLCDSKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPC 917
YWN+P C+ C CNGHA CD GTCI C++ST G +C+ C++GYYG+P G +I CRPC
Sbjct: 874 YWNFPECRVCQCNGHAATCDPIQGTCIDCQDSTTGYSCDSCLDGYYGNPLFGSEIGCRPC 933
Query: 918 PCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDGCLDNYFGNPQERGGSCEPCD 977
CP TV SGL++AD C LD R+ +++C C+EGY G+RC+ C DN+FGNP + GG+C C+
Sbjct: 934 RCPETVASGLAHADGCSLDTRNNNMLCHCQEGYSGSRCEICADNFFGNP-DNGGTCSKCE 992
Query: 978 CSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDH 1037
CSNN DL GNCD TG CL+C Y T GDHC++CK GFFG+AL+QNC +C C+ LG ++
Sbjct: 993 CSNNVDLYDTGNCDRQTGACLKCLYQTTGDHCELCKDGFFGDALQQNCQQCECDFLGTNN 1052
Query: 1038 SKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTG 1097
+ CDR TGQCPCLPNV GV CD+C +NHWKIASG GCE C+CDPIG++ +CN YTG
Sbjct: 1053 TIAHCDRFTGQCPCLPNVQGVRCDQCAENHWKIASGEGCESCNCDPIGALH-EQCNSYTG 1111
Query: 1098 QCQCKSGFGGRQCDQCQTNFWGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVR 1157
QCQCK GFGGR C+QCQ ++WGNPN +C PC+CD G+A QC + G CVCH+GIGG +
Sbjct: 1112 QCQCKPGFGGRACNQCQAHYWGNPNEKCQPCECDQFGAADFQCDRETGNCVCHEGIGGYK 1171
Query: 1158 CDTCARGYIGTAPDCSPCGECFDNWDSILRGLADQTTKVITDASNIKQTGASGAYTKEFE 1217
C+ CARGYIG P CSPCGECF+NWD IL L D TT I A IKQ GA+GAYT EF
Sbjct: 1172 CNECARGYIGQFPHCSPCGECFNNWDLILSALEDATTATILRAKEIKQVGATGAYTSEFS 1231
Query: 1218 LLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQIMNNEDP-NGVGKTLGNTTQRINL 1276
L+KK++ ++ L++NT+ S D+ + ++ Q+ + + + L + ++L
Sbjct: 1232 ELDKKLQHIRNLLQNTSVSLVDIEKLDYETQSLRDQLQASHGRLSETEQNLDDIYNSLSL 1291
Query: 1277 ARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQSTETEK 1336
+ + L L + + + + LKEN LQE+N+EGAL LTR A++ L E +
Sbjct: 1292 SGVELESLQNHSRLVQQLSKELKENGIQLQESNIEGALNLTRHAYERVSNLSTLKDEANE 1351
Query: 1337 QINDAERQCKRTENLVTKTFPQFTQGQEENEKALQRLNEKITSLEKNLPDLNELICDKRG 1396
++ +R CKR ENL K + N K ++ ++TSL +P+LN +C K G
Sbjct: 1352 LASNTDRNCKRVENLSNKIQAE-ADDLANNNKLIEDYRAELTSLTSQIPELNNQVCGKPG 1410
Query: 1397 DPCDNLXXXXXXXX-XXXMWCSNGTLSESNSAKDYAETSKKLINEKESKAEE----LRKH 1451
DPCD+L + C +G + S A A+ ++ I K+ +A++ L +
Sbjct: 1411 DPCDSLCGGAGCGHCGGFLSCEHGAKTHSEEALKVAKDAETAITSKKDQADQTIRALTQA 1470
Query: 1452 MIILSES-NSAKDYAETSKKLINEKEAK---AEEVFRGITTAKQESHAANILAKEAYDHA 1507
+ SE+ AK E S++ +N+ A AE +F + ++ A+ +KE
Sbjct: 1471 KLNASEAYEKAKRGFEQSERYLNQTNANIKLAENLFIALNNFQENKTASPSESKELAQKT 1530
Query: 1508 ASVRNKTAAYVAST--SNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERA 1565
+ K T I + + N ++ VN N+QS +E+A
Sbjct: 1531 LDLDLKLEPEEIETLGDQINRAVSSLKNVEAIIYRTKPDLD--RVN-NLQSIANATKEKA 1587
Query: 1566 NEI----NNVIKSLTDIDTILTETAGDLAKANDLKRKAN--LTKAGADSTKNTVQKIVDV 1619
++I N+V++SL D E+ G KA D ++AN + AG D K +
Sbjct: 1588 DKILDSANSVVESLAAAD----ESQG---KAKDAIQQANSNIELAGQDLEKIDEETYSAE 1640
Query: 1620 LTEARTAQDMAEVA--IQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQERLK 1677
TAQ + ++A +Q +++I +D +IT + + ++ + LQ
Sbjct: 1641 APANNTAQQVEKLAKKVQKLQNNIMKNDRDAKEITKEAGSVKLEAMRARGEANNLQSATS 1700
Query: 1678 SI------QAGFLQNGRS-AMDXXXXXXXXXXXXXXXQKQASGLRSRYQETDNKLLS-KA 1729
+ +A +N R A K + L++ Y + +LL +A
Sbjct: 1701 ATNQTLTDRASRSENARERAKQLLQRASKLTVDTNAKLKDLNDLQTVYLNKNQQLLRLQA 1760
Query: 1730 ESSGLKRARGQMLLN 1744
E L + + L++
Sbjct: 1761 EIGPLNKELNEHLIH 1775
|
|
| WB|WBGene00002247 lam-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-081030-4 lamb2 "laminin, beta 2 (laminin S)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| RGD|1306311 Lamb1 "laminin, beta 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P07942 LAMB1 "Laminin subunit beta-1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1SAE9 LAMB1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:96743 Lamb1 "laminin B1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-021226-1 lamb1a "laminin, beta 1a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MNT4 LAMB1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BDK6 LAMB2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P02469 | LAMB1_MOUSE | No assigned EC number | 0.4159 | 0.9701 | 0.9815 | yes | N/A |
| P07942 | LAMB1_HUMAN | No assigned EC number | 0.4208 | 0.9673 | 0.9787 | yes | N/A |
| P15800 | LAMB2_RAT | No assigned EC number | 0.4101 | 0.9540 | 0.9572 | yes | N/A |
| P11046 | LAMB1_DROME | No assigned EC number | 0.4727 | 0.9501 | 0.9602 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1807 | |||
| pfam00055 | 237 | pfam00055, Laminin_N, Laminin N-terminal (Domain V | 5e-83 | |
| smart00136 | 238 | smart00136, LamNT, Laminin N-terminal domain (doma | 1e-76 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-16 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 5e-15 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 3e-14 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 2e-13 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 3e-13 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 5e-13 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 5e-13 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 6e-13 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-12 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 7e-12 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 9e-12 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-11 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-11 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 1e-11 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-11 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 4e-11 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 5e-11 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 6e-11 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 1e-10 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 3e-10 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 5e-10 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 1e-09 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 1e-09 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-09 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 3e-09 | |
| COG4372 | 499 | COG4372, COG4372, Uncharacterized protein conserve | 3e-09 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 5e-09 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 7e-09 | |
| pfam10174 | 774 | pfam10174, Cast, RIM-binding protein of the cytoma | 1e-08 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 3e-08 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 3e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-08 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 4e-08 | |
| PRK01156 | 895 | PRK01156, PRK01156, chromosome segregation protein | 5e-08 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 6e-08 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 2e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-07 | |
| pfam06160 | 559 | pfam06160, EzrA, Septation ring formation regulato | 2e-07 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 3e-07 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 3e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 3e-07 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 4e-07 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 8e-07 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 9e-07 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-06 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 1e-06 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 2e-06 | |
| TIGR00606 | 1311 | TIGR00606, rad50, rad50 | 2e-06 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 3e-06 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 4e-06 | |
| PRK04863 | 1486 | PRK04863, mukB, cell division protein MukB; Provis | 4e-06 | |
| COG1842 | 225 | COG1842, PspA, Phage shock protein A (IM30), suppr | 5e-06 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 5e-06 | |
| COG3883 | 265 | COG3883, COG3883, Uncharacterized protein conserve | 5e-06 | |
| pfam13166 | 713 | pfam13166, AAA_13, AAA domain | 5e-06 | |
| TIGR04320 | 356 | TIGR04320, Surf_Exclu_PgrA, SEC10/PgrA surface exc | 6e-06 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 1e-05 | |
| COG0840 | 408 | COG0840, Tar, Methyl-accepting chemotaxis protein | 1e-05 | |
| COG4477 | 570 | COG4477, EzrA, Negative regulator of septation rin | 1e-05 | |
| COG1511 | 780 | COG1511, COG1511, Predicted membrane protein [Func | 1e-05 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 2e-05 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 3e-05 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 3e-05 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 3e-05 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 3e-05 | |
| pfam04012 | 220 | pfam04012, PspA_IM30, PspA/IM30 family | 3e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 4e-05 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 4e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 5e-05 | |
| pfam07926 | 132 | pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | 5e-05 | |
| pfam06160 | 559 | pfam06160, EzrA, Septation ring formation regulato | 6e-05 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 8e-05 | |
| pfam09726 | 680 | pfam09726, Macoilin, Transmembrane protein | 8e-05 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 1e-04 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 1e-04 | |
| COG3883 | 265 | COG3883, COG3883, Uncharacterized protein conserve | 1e-04 | |
| pfam13514 | 1118 | pfam13514, AAA_27, AAA domain | 1e-04 | |
| pfam13166 | 713 | pfam13166, AAA_13, AAA domain | 2e-04 | |
| TIGR03185 | 650 | TIGR03185, DNA_S_dndD, DNA sulfur modification pro | 2e-04 | |
| PHA02562 | 562 | PHA02562, 46, endonuclease subunit; Provisional | 2e-04 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 3e-04 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 3e-04 | |
| COG4942 | 420 | COG4942, COG4942, Membrane-bound metallopeptidase | 3e-04 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 3e-04 | |
| smart00283 | 262 | smart00283, MA, Methyl-accepting chemotaxis-like d | 3e-04 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 4e-04 | |
| cd00055 | 50 | cd00055, EGF_Lam, Laminin-type epidermal growth fa | 4e-04 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 4e-04 | |
| COG1340 | 294 | COG1340, COG1340, Uncharacterized archaeal coiled- | 4e-04 | |
| pfam12795 | 239 | pfam12795, MscS_porin, Mechanosensitive ion channe | 4e-04 | |
| PTZ00440 | 2722 | PTZ00440, PTZ00440, reticulocyte binding protein 2 | 4e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 5e-04 | |
| PRK04778 | 569 | PRK04778, PRK04778, septation ring formation regul | 5e-04 | |
| pfam04012 | 220 | pfam04012, PspA_IM30, PspA/IM30 family | 5e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 6e-04 | |
| smart00180 | 46 | smart00180, EGF_Lam, Laminin-type epidermal growth | 6e-04 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 6e-04 | |
| TIGR01612 | 2757 | TIGR01612, 235kDa-fam, reticulocyte binding/rhoptr | 6e-04 | |
| pfam02321 | 186 | pfam02321, OEP, Outer membrane efflux protein | 6e-04 | |
| pfam05701 | 484 | pfam05701, DUF827, Plant protein of unknown functi | 0.001 | |
| pfam12128 | 1198 | pfam12128, DUF3584, Protein of unknown function (D | 0.001 | |
| pfam01576 | 859 | pfam01576, Myosin_tail_1, Myosin tail | 0.001 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.001 | |
| COG0711 | 161 | COG0711, AtpF, F0F1-type ATP synthase, subunit b [ | 0.001 | |
| pfam05622 | 713 | pfam05622, HOOK, HOOK protein | 0.001 | |
| CHL00118 | 156 | CHL00118, atpG, ATP synthase CF0 B' subunit; Valid | 0.001 | |
| pfam12795 | 239 | pfam12795, MscS_porin, Mechanosensitive ion channe | 0.002 | |
| PTZ00440 | 2722 | PTZ00440, PTZ00440, reticulocyte binding protein 2 | 0.002 | |
| TIGR01612 | 2757 | TIGR01612, 235kDa-fam, reticulocyte binding/rhoptr | 0.002 | |
| pfam05149 | 289 | pfam05149, Flagellar_rod, Paraflagellar rod protei | 0.002 | |
| pfam13863 | 126 | pfam13863, DUF4200, Domain of unknown function (DU | 0.002 | |
| PRK11281 | 1113 | PRK11281, PRK11281, hypothetical protein; Provisio | 0.002 | |
| COG1511 | 780 | COG1511, COG1511, Predicted membrane protein [Func | 0.003 | |
| PRK02224 | 880 | PRK02224, PRK02224, chromosome segregation protein | 0.003 | |
| pfam08317 | 321 | pfam08317, Spc7, Spc7 kinetochore protein | 0.003 | |
| TIGR03545 | 555 | TIGR03545, TIGR03545, TIGR03545 family protein | 0.003 | |
| pfam00053 | 49 | pfam00053, Laminin_EGF, Laminin EGF-like (Domains | 0.004 | |
| COG1538 | 457 | COG1538, TolC, Outer membrane protein [Cell envelo | 0.004 | |
| pfam13949 | 292 | pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain bi | 0.004 |
| >gnl|CDD|215682 pfam00055, Laminin_N, Laminin N-terminal (Domain VI) | Back alignment and domain information |
|---|
Score = 271 bits (695), Expect = 5e-83
Identities = 127/246 (51%), Positives = 158/246 (64%), Gaps = 18/246 (7%)
Query: 40 CYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDK-KKCFTCNSSPRFDNNPAFSH 98
CYPATGNL I R L A+STCGLHG +CI+S L+ + KKCF C+S+ NP SH
Sbjct: 1 CYPATGNLAINRA--LSATSTCGLHGPEPYCILSHLQPRDKKCFLCDSN---SPNPRESH 55
Query: 99 KIHNIVYATVPRTKTISWWQSE---NGVE--NVTIQLDMEAEFHFTHLIIYFKTFRPAAM 153
I + P+ T WWQSE NGV+ NVTI LD+EAEFHFT++II FKTFRPAAM
Sbjct: 56 PISFLTDTFNPQDTT--WWQSETMQNGVQYPNVTITLDLEAEFHFTYVIIKFKTFRPAAM 113
Query: 154 LIERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRKL---TDVYCESRYSSNNPSSGGEV 210
+ ERS DFG TW Y+Y+A C ++PGIPR +R DV C SRYS P + GEV
Sbjct: 114 IYERSSDFG-TWIPYQYYAYSCESTYPGIPRRPIRTGRAEDDVICTSRYSDIEPLTEGEV 172
Query: 211 ILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKYYYAIT 270
I L N DP S +Q +K TN+RI +LHTLGD+LLD+ ++ EKYYYAI+
Sbjct: 173 IFSTLEGRPSADNFDP-SPRLQEWLKATNIRITLQRLHTLGDNLLDSDPEVLEKYYYAIS 231
Query: 271 QMIVRG 276
++V G
Sbjct: 232 DIVVGG 237
|
Length = 237 |
| >gnl|CDD|214532 smart00136, LamNT, Laminin N-terminal domain (domain VI) | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|226809 COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|220614 pfam10174, Cast, RIM-binding protein of the cytomatrix active zone | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
| >gnl|CDD|100796 PRK01156, PRK01156, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|129694 TIGR00606, rad50, rad50 | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235316 PRK04863, mukB, cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224755 COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|226400 COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|221952 pfam13166, AAA_13, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|234541 TIGR04320, Surf_Exclu_PgrA, SEC10/PgrA surface exclusion domain | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|223910 COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >gnl|CDD|226883 COG4477, EzrA, Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224428 COG1511, COG1511, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217843 pfam04012, PspA_IM30, PspA/IM30 family | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|149160 pfam07926, TPR_MLP1_2, TPR/MLP1/MLP2-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|114855 pfam06160, EzrA, Septation ring formation regulator, EzrA | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
| >gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
| >gnl|CDD|226400 COG3883, COG3883, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|205692 pfam13514, AAA_27, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|221952 pfam13166, AAA_13, AAA domain | Back alignment and domain information |
|---|
| >gnl|CDD|234141 TIGR03185, DNA_S_dndD, DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >gnl|CDD|222878 PHA02562, 46, endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227278 COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|214599 smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer) | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|238012 cd00055, EGF_Lam, Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|224259 COG1340, COG1340, Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|221776 pfam12795, MscS_porin, Mechanosensitive ion channel porin domain | Back alignment and domain information |
|---|
| >gnl|CDD|240419 PTZ00440, PTZ00440, reticulocyte binding protein 2-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|179877 PRK04778, PRK04778, septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217843 pfam04012, PspA_IM30, PspA/IM30 family | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|214543 smart00180, EGF_Lam, Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|130673 TIGR01612, 235kDa-fam, reticulocyte binding/rhoptry protein | Back alignment and domain information |
|---|
| >gnl|CDD|202204 pfam02321, OEP, Outer membrane efflux protein | Back alignment and domain information |
|---|
| >gnl|CDD|218704 pfam05701, DUF827, Plant protein of unknown function (DUF827) | Back alignment and domain information |
|---|
| >gnl|CDD|221432 pfam12128, DUF3584, Protein of unknown function (DUF3584) | Back alignment and domain information |
|---|
| >gnl|CDD|144972 pfam01576, Myosin_tail_1, Myosin tail | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223783 COG0711, AtpF, F0F1-type ATP synthase, subunit b [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|218661 pfam05622, HOOK, HOOK protein | Back alignment and domain information |
|---|
| >gnl|CDD|214369 CHL00118, atpG, ATP synthase CF0 B' subunit; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|221776 pfam12795, MscS_porin, Mechanosensitive ion channel porin domain | Back alignment and domain information |
|---|
| >gnl|CDD|240419 PTZ00440, PTZ00440, reticulocyte binding protein 2-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|130673 TIGR01612, 235kDa-fam, reticulocyte binding/rhoptry protein | Back alignment and domain information |
|---|
| >gnl|CDD|113902 pfam05149, Flagellar_rod, Paraflagellar rod protein | Back alignment and domain information |
|---|
| >gnl|CDD|206034 pfam13863, DUF4200, Domain of unknown function (DUF4200) | Back alignment and domain information |
|---|
| >gnl|CDD|236892 PRK11281, PRK11281, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224428 COG1511, COG1511, Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219791 pfam08317, Spc7, Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >gnl|CDD|234252 TIGR03545, TIGR03545, TIGR03545 family protein | Back alignment and domain information |
|---|
| >gnl|CDD|215680 pfam00053, Laminin_EGF, Laminin EGF-like (Domains III and V) | Back alignment and domain information |
|---|
| >gnl|CDD|224455 COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >gnl|CDD|222469 pfam13949, ALIX_LYPXL_bnd, ALIX V-shaped domain binding to HIV | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1807 | |||
| KOG0994|consensus | 1758 | 100.0 | ||
| KOG1836|consensus | 1705 | 100.0 | ||
| KOG0994|consensus | 1758 | 100.0 | ||
| KOG3512|consensus | 592 | 100.0 | ||
| KOG1836|consensus | 1705 | 100.0 | ||
| smart00136 | 238 | LamNT Laminin N-terminal domain (domain VI). N-ter | 100.0 | |
| PF00055 | 237 | Laminin_N: Laminin N-terminal (Domain VI); InterPr | 100.0 | |
| KOG3512|consensus | 592 | 99.94 | ||
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 99.79 | |
| KOG4289|consensus | 2531 | 99.78 | ||
| KOG4289|consensus | 2531 | 99.77 | ||
| PRK02224 | 880 | chromosome segregation protein; Provisional | 99.77 | |
| KOG0161|consensus | 1930 | 99.74 | ||
| KOG0161|consensus | 1930 | 99.73 | ||
| PRK02224 | 880 | chromosome segregation protein; Provisional | 99.72 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 99.71 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 99.69 | |
| KOG0996|consensus | 1293 | 99.68 | ||
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 99.67 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 99.67 | |
| KOG0933|consensus | 1174 | 99.67 | ||
| KOG0976|consensus | 1265 | 99.66 | ||
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.66 | |
| KOG3509|consensus | 964 | 99.65 | ||
| KOG4674|consensus | 1822 | 99.64 | ||
| KOG0996|consensus | 1293 | 99.64 | ||
| KOG4674|consensus | 1822 | 99.6 | ||
| KOG3509|consensus | 964 | 99.59 | ||
| KOG0933|consensus | 1174 | 99.57 | ||
| PRK01156 | 895 | chromosome segregation protein; Provisional | 99.56 | |
| KOG0964|consensus | 1200 | 99.56 | ||
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 99.56 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 99.53 | |
| KOG0250|consensus | 1074 | 99.53 | ||
| KOG0250|consensus | 1074 | 99.52 | ||
| KOG0976|consensus | 1265 | 99.52 | ||
| KOG0964|consensus | 1200 | 99.5 | ||
| KOG0971|consensus | 1243 | 99.49 | ||
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 99.47 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 99.47 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 99.46 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 99.44 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 99.43 | |
| PF05483 | 786 | SCP-1: Synaptonemal complex protein 1 (SCP-1); Int | 99.42 | |
| KOG4643|consensus | 1195 | 99.4 | ||
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 99.4 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 99.38 | |
| KOG0978|consensus | 698 | 99.38 | ||
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 99.37 | |
| KOG4673|consensus | 961 | 99.36 | ||
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 99.36 | |
| KOG4593|consensus | 716 | 99.34 | ||
| KOG0018|consensus | 1141 | 99.31 | ||
| PF13514 | 1111 | AAA_27: AAA domain | 99.3 | |
| PF13514 | 1111 | AAA_27: AAA domain | 99.3 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 99.29 | |
| KOG0962|consensus | 1294 | 99.29 | ||
| KOG4643|consensus | 1195 | 99.28 | ||
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 99.26 | |
| KOG0018|consensus | 1141 | 99.26 | ||
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 99.24 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 99.23 | |
| KOG0962|consensus | 1294 | 99.22 | ||
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 99.2 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 99.19 | |
| KOG4673|consensus | 961 | 99.13 | ||
| KOG4593|consensus | 716 | 99.11 | ||
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 99.1 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 99.1 | |
| COG4477 | 570 | EzrA Negative regulator of septation ring formatio | 99.09 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 99.08 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 99.07 | |
| PRK10246 | 1047 | exonuclease subunit SbcC; Provisional | 99.07 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 99.06 | |
| KOG0979|consensus | 1072 | 99.06 | ||
| KOG0971|consensus | 1243 | 99.06 | ||
| KOG0612|consensus | 1317 | 99.05 | ||
| PTZ00121 | 2084 | MAEBL; Provisional | 99.02 | |
| KOG1225|consensus | 525 | 98.99 | ||
| KOG0612|consensus | 1317 | 98.98 | ||
| KOG0995|consensus | 581 | 98.97 | ||
| PTZ00121 | 2084 | MAEBL; Provisional | 98.97 | |
| PF06008 | 264 | Laminin_I: Laminin Domain I; InterPro: IPR009254 L | 98.95 | |
| KOG1225|consensus | 525 | 98.93 | ||
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 98.91 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 98.91 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 98.91 | |
| KOG0517|consensus | 2473 | 98.88 | ||
| PF15450 | 531 | DUF4631: Domain of unknown function (DUF4631) | 98.87 | |
| PF15450 | 531 | DUF4631: Domain of unknown function (DUF4631) | 98.87 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 98.87 | |
| KOG0977|consensus | 546 | 98.87 | ||
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 98.87 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 98.82 | |
| KOG1003|consensus | 205 | 98.81 | ||
| KOG0999|consensus | 772 | 98.81 | ||
| PRK11637 | 428 | AmiB activator; Provisional | 98.8 | |
| KOG0979|consensus | 1072 | 98.8 | ||
| KOG0999|consensus | 772 | 98.79 | ||
| PF07111 | 739 | HCR: Alpha helical coiled-coil rod protein (HCR); | 98.78 | |
| KOG0517|consensus | 2473 | 98.78 | ||
| KOG0963|consensus | 629 | 98.78 | ||
| KOG0995|consensus | 581 | 98.77 | ||
| cd00055 | 50 | EGF_Lam Laminin-type epidermal growth factor-like | 98.77 | |
| smart00180 | 46 | EGF_Lam Laminin-type epidermal growth factor-like | 98.76 | |
| KOG1003|consensus | 205 | 98.76 | ||
| COG3096 | 1480 | MukB Uncharacterized protein involved in chromosom | 98.76 | |
| KOG0977|consensus | 546 | 98.76 | ||
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 98.75 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 98.75 | |
| KOG0963|consensus | 629 | 98.73 | ||
| PF00053 | 49 | Laminin_EGF: Laminin EGF-like (Domains III and V); | 98.73 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 98.7 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 98.7 | |
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 98.69 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 98.69 | |
| KOG1029|consensus | 1118 | 98.67 | ||
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 98.65 | |
| KOG0946|consensus | 970 | 98.64 | ||
| smart00180 | 46 | EGF_Lam Laminin-type epidermal growth factor-like | 98.64 | |
| KOG0946|consensus | 970 | 98.64 | ||
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 98.63 | |
| KOG1218|consensus | 316 | 98.6 | ||
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 98.58 | |
| cd00055 | 50 | EGF_Lam Laminin-type epidermal growth factor-like | 98.56 | |
| KOG1029|consensus | 1118 | 98.54 | ||
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 98.52 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 98.51 | |
| KOG1219|consensus | 4289 | 98.5 | ||
| PF05622 | 713 | HOOK: HOOK protein; InterPro: IPR008636 This famil | 98.49 | |
| PF06008 | 264 | Laminin_I: Laminin Domain I; InterPro: IPR009254 L | 98.48 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 98.48 | |
| KOG1218|consensus | 316 | 98.48 | ||
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 98.47 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 98.46 | |
| PF00053 | 49 | Laminin_EGF: Laminin EGF-like (Domains III and V); | 98.45 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 98.45 | |
| TIGR00618 | 1042 | sbcc exonuclease SbcC. This family is based on the | 98.44 | |
| COG4717 | 984 | Uncharacterized conserved protein [Function unknow | 98.43 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 98.41 | |
| KOG0243|consensus | 1041 | 98.38 | ||
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 98.36 | |
| TIGR01612 | 2757 | 235kDa-fam reticulocyte binding/rhoptry protein. T | 98.36 | |
| PF03148 | 384 | Tektin: Tektin family; InterPro: IPR000435 Tektin | 98.36 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 98.33 | |
| KOG4809|consensus | 654 | 98.32 | ||
| PTZ00440 | 2722 | reticulocyte binding protein 2-like protein; Provi | 98.29 | |
| COG3096 | 1480 | MukB Uncharacterized protein involved in chromosom | 98.28 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 98.27 | |
| KOG4809|consensus | 654 | 98.23 | ||
| PF14915 | 305 | CCDC144C: CCDC144C protein coiled-coil region | 98.23 | |
| KOG1937|consensus | 521 | 98.22 | ||
| PF04108 | 412 | APG17: Autophagy protein Apg17 ; InterPro: IPR0072 | 98.21 | |
| PF12252 | 1439 | SidE: Dot/Icm substrate protein; InterPro: IPR0210 | 98.21 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 98.19 | |
| PTZ00440 | 2722 | reticulocyte binding protein 2-like protein; Provi | 98.18 | |
| COG4717 | 984 | Uncharacterized conserved protein [Function unknow | 98.18 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 98.18 | |
| PF05911 | 769 | DUF869: Plant protein of unknown function (DUF869) | 98.16 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 98.15 | |
| KOG0980|consensus | 980 | 98.15 | ||
| KOG1219|consensus | 4289 | 98.15 | ||
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 98.15 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 98.12 | |
| KOG1226|consensus | 783 | 98.11 | ||
| PF03148 | 384 | Tektin: Tektin family; InterPro: IPR000435 Tektin | 98.09 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 98.07 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 98.07 | |
| COG4913 | 1104 | Uncharacterized protein conserved in bacteria [Fun | 98.06 | |
| KOG1226|consensus | 783 | 98.05 | ||
| KOG2685|consensus | 421 | 98.04 | ||
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 98.04 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 98.02 | |
| smart00283 | 262 | MA Methyl-accepting chemotaxis-like domains (chemo | 98.01 | |
| KOG1217|consensus | 487 | 98.0 | ||
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 98.0 | |
| KOG0993|consensus | 542 | 97.97 | ||
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 97.97 | |
| PRK09039 | 343 | hypothetical protein; Validated | 97.95 | |
| KOG1937|consensus | 521 | 97.95 | ||
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 97.93 | |
| PF04108 | 412 | APG17: Autophagy protein Apg17 ; InterPro: IPR0072 | 97.93 | |
| PRK09039 | 343 | hypothetical protein; Validated | 97.91 | |
| PF03302 | 397 | VSP: Giardia variant-specific surface protein; Int | 97.88 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 97.88 | |
| PF05010 | 207 | TACC: Transforming acidic coiled-coil-containing p | 97.86 | |
| PTZ00214 | 800 | high cysteine membrane protein Group 4; Provisiona | 97.83 | |
| PF05276 | 239 | SH3BP5: SH3 domain-binding protein 5 (SH3BP5); Int | 97.83 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 97.83 | |
| PF09728 | 309 | Taxilin: Myosin-like coiled-coil protein; InterPro | 97.82 | |
| PF12252 | 1439 | SidE: Dot/Icm substrate protein; InterPro: IPR0210 | 97.82 | |
| PF13166 | 712 | AAA_13: AAA domain | 97.79 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 97.79 | |
| KOG4260|consensus | 350 | 97.78 | ||
| PRK15048 | 553 | methyl-accepting chemotaxis protein II; Provisiona | 97.77 | |
| PF13166 | 712 | AAA_13: AAA domain | 97.76 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 97.75 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 97.75 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 97.75 | |
| cd09235 | 339 | V_Alix Middle V-domain of mammalian Alix and relat | 97.74 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 97.73 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 97.73 | |
| KOG1388|consensus | 217 | 97.72 | ||
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 97.71 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 97.71 | |
| TIGR01612 | 2757 | 235kDa-fam reticulocyte binding/rhoptry protein. T | 97.68 | |
| PRK15041 | 554 | methyl-accepting chemotaxis protein I; Provisional | 97.67 | |
| KOG2685|consensus | 421 | 97.67 | ||
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 97.66 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 97.64 | |
| KOG1388|consensus | 217 | 97.63 | ||
| PF06637 | 442 | PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th | 97.63 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 97.6 | |
| TIGR02977 | 219 | phageshock_pspA phage shock protein A. Members of | 97.6 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 97.59 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 97.59 | |
| PF05276 | 239 | SH3BP5: SH3 domain-binding protein 5 (SH3BP5); Int | 97.59 | |
| PF08580 | 683 | KAR9: Yeast cortical protein KAR9; InterPro: IPR01 | 97.58 | |
| PF13949 | 296 | ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HI | 97.58 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 97.57 | |
| PRK10698 | 222 | phage shock protein PspA; Provisional | 97.57 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 97.56 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 97.56 | |
| KOG1217|consensus | 487 | 97.56 | ||
| PRK10698 | 222 | phage shock protein PspA; Provisional | 97.53 | |
| PF15066 | 527 | CAGE1: Cancer-associated gene protein 1 family | 97.53 | |
| cd09238 | 339 | V_Alix_like_1 Protein-interacting V-domain of an u | 97.53 | |
| cd09236 | 353 | V_AnPalA_UmRIM20_like Protein-interacting V-domain | 97.53 | |
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 97.5 | |
| KOG1850|consensus | 391 | 97.49 | ||
| KOG4302|consensus | 660 | 97.49 | ||
| KOG2129|consensus | 552 | 97.49 | ||
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 97.49 | |
| PF12795 | 240 | MscS_porin: Mechanosensitive ion channel porin dom | 97.48 | |
| PF06548 | 488 | Kinesin-related: Kinesin-related; InterPro: IPR010 | 97.47 | |
| PRK10869 | 553 | recombination and repair protein; Provisional | 97.44 | |
| PF12795 | 240 | MscS_porin: Mechanosensitive ion channel porin dom | 97.43 | |
| KOG0982|consensus | 502 | 97.43 | ||
| KOG0249|consensus | 916 | 97.43 | ||
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 97.43 | |
| smart00787 | 312 | Spc7 Spc7 kinetochore protein. This domain is foun | 97.43 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 97.42 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 97.42 | |
| KOG4438|consensus | 446 | 97.42 | ||
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 97.42 | |
| KOG2008|consensus | 426 | 97.42 | ||
| cd07653 | 251 | F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and B | 97.41 | |
| KOG4572|consensus | 1424 | 97.41 | ||
| TIGR01843 | 423 | type_I_hlyD type I secretion membrane fusion prote | 97.4 | |
| KOG2991|consensus | 330 | 97.4 | ||
| cd09234 | 337 | V_HD-PTP_like Protein-interacting V-domain of mamm | 97.39 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 97.39 | |
| KOG2129|consensus | 552 | 97.39 | ||
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 97.38 | |
| KOG1853|consensus | 333 | 97.38 | ||
| KOG1853|consensus | 333 | 97.35 | ||
| KOG0992|consensus | 613 | 97.34 | ||
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 97.33 | |
| KOG1899|consensus | 861 | 97.33 | ||
| PLN02939 | 977 | transferase, transferring glycosyl groups | 97.31 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 97.31 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 97.27 | |
| TIGR02977 | 219 | phageshock_pspA phage shock protein A. Members of | 97.27 | |
| PF04012 | 221 | PspA_IM30: PspA/IM30 family; InterPro: IPR007157 T | 97.26 | |
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 97.26 | |
| cd08915 | 342 | V_Alix_like Protein-interacting V-domain of mammal | 97.26 | |
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 97.26 | |
| PTZ00214 | 800 | high cysteine membrane protein Group 4; Provisiona | 97.26 | |
| COG0497 | 557 | RecN ATPase involved in DNA repair [DNA replicatio | 97.24 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 97.23 | |
| PF01442 | 202 | Apolipoprotein: Apolipoprotein A1/A4/E domain; Int | 97.22 | |
| PF08580 | 683 | KAR9: Yeast cortical protein KAR9; InterPro: IPR01 | 97.21 | |
| COG1842 | 225 | PspA Phage shock protein A (IM30), suppresses sigm | 97.21 | |
| PF05384 | 159 | DegS: Sensor protein DegS; InterPro: IPR008595 Thi | 97.18 | |
| PF04912 | 388 | Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit | 97.18 | |
| KOG4360|consensus | 596 | 97.17 | ||
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 97.16 | |
| PF03302 | 397 | VSP: Giardia variant-specific surface protein; Int | 97.16 | |
| KOG4260|consensus | 350 | 97.14 | ||
| PRK09793 | 533 | methyl-accepting protein IV; Provisional | 97.14 | |
| PRK15048 | 553 | methyl-accepting chemotaxis protein II; Provisiona | 97.14 | |
| KOG1214|consensus | 1289 | 97.13 | ||
| PF13949 | 296 | ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HI | 97.12 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 97.12 | |
| KOG1899|consensus | 861 | 97.12 | ||
| cd08915 | 342 | V_Alix_like Protein-interacting V-domain of mammal | 97.1 | |
| KOG0992|consensus | 613 | 97.09 | ||
| KOG0244|consensus | 913 | 97.09 | ||
| PF15397 | 258 | DUF4618: Domain of unknown function (DUF4618) | 97.09 | |
| KOG4286|consensus | 966 | 97.08 | ||
| KOG0993|consensus | 542 | 97.05 | ||
| KOG4360|consensus | 596 | 97.04 | ||
| PF12777 | 344 | MT: Microtubule-binding stalk of dynein motor; Int | 97.02 | |
| COG3206 | 458 | GumC Uncharacterized protein involved in exopolysa | 96.99 | |
| KOG2008|consensus | 426 | 96.98 | ||
| PF06818 | 202 | Fez1: Fez1; InterPro: IPR009638 This family repres | 96.97 | |
| PF05816 | 333 | TelA: Toxic anion resistance protein (TelA); Inter | 96.94 | |
| PF01540 | 353 | Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR0 | 96.93 | |
| PLN03229 | 762 | acetyl-coenzyme A carboxylase carboxyl transferase | 96.93 | |
| PTZ00332 | 589 | paraflagellar rod protein; Provisional | 96.92 | |
| KOG4807|consensus | 593 | 96.91 | ||
| cd09234 | 337 | V_HD-PTP_like Protein-interacting V-domain of mamm | 96.91 | |
| PF11172 | 201 | DUF2959: Protein of unknown function (DUF2959); In | 96.9 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 96.88 | |
| PF13870 | 177 | DUF4201: Domain of unknown function (DUF4201) | 96.87 | |
| KOG0804|consensus | 493 | 96.85 | ||
| KOG4302|consensus | 660 | 96.85 | ||
| KOG4438|consensus | 446 | 96.85 | ||
| KOG1214|consensus | 1289 | 96.84 | ||
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 96.8 | |
| TIGR01000 | 457 | bacteriocin_acc bacteriocin secretion accessory pr | 96.77 | |
| cd09237 | 356 | V_ScBro1_like Protein-interacting V-domain of Sacc | 96.76 | |
| PF14073 | 178 | Cep57_CLD: Centrosome localisation domain of Cep57 | 96.76 | |
| KOG4460|consensus | 741 | 96.74 | ||
| PF15294 | 278 | Leu_zip: Leucine zipper | 96.71 | |
| KOG4677|consensus | 554 | 96.71 | ||
| PRK15041 | 554 | methyl-accepting chemotaxis protein I; Provisional | 96.7 | |
| KOG1850|consensus | 391 | 96.69 | ||
| PF07926 | 132 | TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: | 96.66 | |
| KOG0244|consensus | 913 | 96.65 | ||
| PF06785 | 401 | UPF0242: Uncharacterised protein family (UPF0242); | 96.64 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 96.64 | |
| PF00754 | 129 | F5_F8_type_C: F5/8 type C domain; InterPro: IPR000 | 96.63 | |
| KOG2991|consensus | 330 | 96.62 | ||
| cd07648 | 261 | F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Am | 96.57 | |
| KOG4787|consensus | 852 | 96.57 | ||
| COG4913 | 1104 | Uncharacterized protein conserved in bacteria [Fun | 96.56 | |
| PF04094 | 828 | DUF390: Protein of unknown function (DUF390); Inte | 96.54 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 96.53 | |
| PF14073 | 178 | Cep57_CLD: Centrosome localisation domain of Cep57 | 96.51 | |
| COG2433 | 652 | Uncharacterized conserved protein [Function unknow | 96.51 | |
| KOG3595|consensus | 1395 | 96.5 | ||
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 96.47 | |
| PRK15374 | 593 | pathogenicity island 1 effector protein SipB; Prov | 96.42 | |
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 96.39 | |
| PF11172 | 201 | DUF2959: Protein of unknown function (DUF2959); In | 96.39 | |
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 96.38 | |
| cd07655 | 258 | F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/ | 96.37 | |
| KOG0163|consensus | 1259 | 96.36 | ||
| cd07676 | 253 | F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/A | 96.35 | |
| KOG3647|consensus | 338 | 96.34 | ||
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 96.33 | |
| PF06818 | 202 | Fez1: Fez1; InterPro: IPR009638 This family repres | 96.3 | |
| PF10498 | 359 | IFT57: Intra-flagellar transport protein 57 ; Inte | 96.25 | |
| cd09236 | 353 | V_AnPalA_UmRIM20_like Protein-interacting V-domain | 96.25 | |
| smart00806 | 426 | AIP3 Actin interacting protein 3. Aip3p/Bud6p is a | 96.22 | |
| PHA03246 | 3095 | large tegument protein UL36; Provisional | 96.18 | |
| KOG3958|consensus | 371 | 96.16 | ||
| PF04912 | 388 | Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamit | 96.16 | |
| smart00051 | 63 | DSL delta serrate ligand. | 96.14 | |
| PF14643 | 473 | DUF4455: Domain of unknown function (DUF4455) | 96.14 | |
| cd07664 | 234 | BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of S | 96.11 | |
| PF14992 | 280 | TMCO5: TMCO5 family | 96.11 | |
| PF00769 | 246 | ERM: Ezrin/radixin/moesin family; InterPro: IPR011 | 96.1 | |
| PF04949 | 159 | Transcrip_act: Transcriptional activator; InterPro | 96.1 | |
| PF14817 | 632 | HAUS5: HAUS augmin-like complex subunit 5 | 96.08 | |
| cd09235 | 339 | V_Alix Middle V-domain of mammalian Alix and relat | 96.07 | |
| KOG0810|consensus | 297 | 96.07 | ||
| cd00176 | 213 | SPEC Spectrin repeats, found in several proteins i | 96.04 | |
| KOG4687|consensus | 389 | 96.03 | ||
| PF15294 | 278 | Leu_zip: Leucine zipper | 96.03 | |
| cd07653 | 251 | F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and B | 95.99 | |
| PF08614 | 194 | ATG16: Autophagy protein 16 (ATG16); InterPro: IPR | 95.93 | |
| KOG4286|consensus | 966 | 95.93 | ||
| PF10234 | 267 | Cluap1: Clusterin-associated protein-1; InterPro: | 95.89 | |
| KOG0163|consensus | 1259 | 95.89 | ||
| PF09325 | 236 | Vps5: Vps5 C terminal like; InterPro: IPR015404 Vp | 95.88 | |
| PHA03332 | 1328 | membrane glycoprotein; Provisional | 95.86 | |
| PF04949 | 159 | Transcrip_act: Transcriptional activator; InterPro | 95.76 | |
| KOG1103|consensus | 561 | 95.73 | ||
| cd00176 | 213 | SPEC Spectrin repeats, found in several proteins i | 95.72 | |
| smart00051 | 63 | DSL delta serrate ligand. | 95.66 | |
| COG4192 | 673 | Signal transduction histidine kinase regulating ph | 95.64 | |
| COG5022 | 1463 | Myosin heavy chain [Cytoskeleton] | 95.63 | |
| PRK09841 | 726 | cryptic autophosphorylating protein tyrosine kinas | 95.62 | |
| COG3853 | 386 | TelA Uncharacterized protein involved in tellurite | 95.6 | |
| KOG4807|consensus | 593 | 95.6 | ||
| PF10212 | 518 | TTKRSYEDQ: Predicted coiled-coil domain-containing | 95.6 | |
| KOG4403|consensus | 575 | 95.58 | ||
| PF15358 | 558 | TSKS: Testis-specific serine kinase substrate | 95.57 | |
| KOG0040|consensus | 2399 | 95.56 | ||
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 95.54 | |
| KOG2196|consensus | 254 | 95.52 | ||
| PTZ00464 | 211 | SNF-7-like protein; Provisional | 95.49 | |
| COG5283 | 1213 | Phage-related tail protein [Function unknown] | 95.49 | |
| PF05478 | 806 | Prominin: Prominin; InterPro: IPR008795 The promin | 95.47 | |
| PF15290 | 305 | Syntaphilin: Golgi-localised syntaxin-1-binding cl | 95.45 | |
| PF06637 | 442 | PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 Th | 95.45 | |
| PF05478 | 806 | Prominin: Prominin; InterPro: IPR008795 The promin | 95.41 | |
| PF03915 | 424 | AIP3: Actin interacting protein 3; InterPro: IPR02 | 95.41 | |
| PF01540 | 353 | Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR0 | 95.39 | |
| PF04100 | 383 | Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 | 95.38 | |
| PRK15178 | 434 | Vi polysaccharide export inner membrane protein Ve | 95.37 | |
| KOG3647|consensus | 338 | 95.36 | ||
| PF14992 | 280 | TMCO5: TMCO5 family | 95.29 | |
| smart00806 | 426 | AIP3 Actin interacting protein 3. Aip3p/Bud6p is a | 95.25 | |
| PF06548 | 488 | Kinesin-related: Kinesin-related; InterPro: IPR010 | 95.25 | |
| KOG2220|consensus | 714 | 95.25 | ||
| PF05278 | 269 | PEARLI-4: Arabidopsis phospholipase-like protein ( | 95.22 | |
| cd07666 | 243 | BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of S | 95.19 | |
| cd07680 | 258 | F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin | 95.09 | |
| TIGR02302 | 851 | aProt_lowcomp conserved hypothetical protein TIGR0 | 95.08 | |
| PF15290 | 305 | Syntaphilin: Golgi-localised syntaxin-1-binding cl | 95.07 | |
| PF04582 | 326 | Reo_sigmaC: Reovirus sigma C capsid protein; Inter | 95.06 | |
| PF04740 | 204 | LXG: LXG domain of WXG superfamily; InterPro: IPR0 | 95.05 | |
| PF13779 | 820 | DUF4175: Domain of unknown function (DUF4175) | 95.05 | |
| cd07665 | 234 | BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of S | 95.05 | |
| PF03915 | 424 | AIP3: Actin interacting protein 3; InterPro: IPR02 | 95.0 | |
| cd07664 | 234 | BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of S | 94.95 | |
| COG5074 | 280 | t-SNARE complex subunit, syntaxin [Intracellular t | 94.93 | |
| PF05546 | 207 | She9_MDM33: She9 / Mdm33 family; InterPro: IPR0088 | 94.9 | |
| COG3524 | 372 | KpsE Capsule polysaccharide export protein [Cell e | 94.9 | |
| PHA03246 | 3095 | large tegument protein UL36; Provisional | 94.89 | |
| KOG2196|consensus | 254 | 94.88 | ||
| KOG3958|consensus | 371 | 94.87 | ||
| PF11559 | 151 | ADIP: Afadin- and alpha -actinin-Binding; InterPro | 94.86 | |
| PRK11519 | 719 | tyrosine kinase; Provisional | 94.86 | |
| PF05278 | 269 | PEARLI-4: Arabidopsis phospholipase-like protein ( | 94.85 | |
| PF10368 | 204 | YkyA: Putative cell-wall binding lipoprotein; Inte | 94.85 | |
| PF05262 | 489 | Borrelia_P83: Borrelia P83/100 protein; InterPro: | 94.84 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 94.83 | |
| cd00057 | 143 | FA58C Substituted updates: Jan 31, 2002 | 94.83 | |
| PF05262 | 489 | Borrelia_P83: Borrelia P83/100 protein; InterPro: | 94.83 | |
| COG5283 | 1213 | Phage-related tail protein [Function unknown] | 94.82 | |
| cd07667 | 240 | BAR_SNX30 The Bin/Amphiphysin/Rvs (BAR) domain of | 94.82 | |
| PF04740 | 204 | LXG: LXG domain of WXG superfamily; InterPro: IPR0 | 94.81 | |
| KOG1666|consensus | 220 | 94.8 | ||
| PF05546 | 207 | She9_MDM33: She9 / Mdm33 family; InterPro: IPR0088 | 94.79 | |
| KOG4687|consensus | 389 | 94.75 | ||
| PF09738 | 302 | DUF2051: Double stranded RNA binding protein (DUF2 | 94.75 | |
| KOG4657|consensus | 246 | 94.72 | ||
| PF05816 | 333 | TelA: Toxic anion resistance protein (TelA); Inter | 94.72 | |
| PF14988 | 206 | DUF4515: Domain of unknown function (DUF4515) | 94.71 | |
| cd07652 | 234 | F-BAR_Rgd1 The F-BAR (FES-CIP4 Homology and Bin/Am | 94.68 | |
| PF09304 | 107 | Cortex-I_coil: Cortexillin I, coiled coil; InterPr | 94.68 | |
| KOG1655|consensus | 218 | 94.68 | ||
| PF10368 | 204 | YkyA: Putative cell-wall binding lipoprotein; Inte | 94.63 | |
| PTZ00464 | 211 | SNF-7-like protein; Provisional | 94.63 | |
| COG3524 | 372 | KpsE Capsule polysaccharide export protein [Cell e | 94.63 | |
| cd07627 | 216 | BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of | 94.61 | |
| cd07596 | 218 | BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of So | 94.59 | |
| PF06009 | 138 | Laminin_II: Laminin Domain II; InterPro: IPR010307 | 94.58 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 94.58 | |
| cd07643 | 231 | I-BAR_IMD_MIM Inverse (I)-BAR, also known as the I | 94.58 | |
| cd07665 | 234 | BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of S | 94.54 | |
| cd07648 | 261 | F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Am | 94.53 | |
| PF04582 | 326 | Reo_sigmaC: Reovirus sigma C capsid protein; Inter | 94.52 | |
| cd09237 | 356 | V_ScBro1_like Protein-interacting V-domain of Sacc | 94.48 | |
| PF13805 | 271 | Pil1: Eisosome component PIL1; PDB: 3PLT_B. | 94.48 | |
| TIGR02132 | 189 | phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR | 94.46 | |
| PF15035 | 182 | Rootletin: Ciliary rootlet component, centrosome c | 94.45 | |
| TIGR02971 | 327 | heterocyst_DevB ABC exporter membrane fusion prote | 94.45 | |
| PF07794 | 790 | DUF1633: Protein of unknown function (DUF1633); In | 94.45 | |
| PF13779 | 820 | DUF4175: Domain of unknown function (DUF4175) | 94.38 | |
| PF15358 | 558 | TSKS: Testis-specific serine kinase substrate | 94.35 | |
| TIGR02971 | 327 | heterocyst_DevB ABC exporter membrane fusion prote | 94.32 | |
| cd07675 | 252 | F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/ | 94.32 | |
| PF04163 | 544 | Tht1: Tht1-like nuclear fusion protein ; InterPro: | 94.31 | |
| KOG0972|consensus | 384 | 94.28 | ||
| PRK15178 | 434 | Vi polysaccharide export inner membrane protein Ve | 94.26 | |
| KOG4637|consensus | 464 | 94.26 | ||
| PF09731 | 582 | Mitofilin: Mitochondrial inner membrane protein; I | 94.23 | |
| PF07889 | 126 | DUF1664: Protein of unknown function (DUF1664); In | 94.2 | |
| cd09238 | 339 | V_Alix_like_1 Protein-interacting V-domain of an u | 94.14 | |
| PF12661 | 13 | hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E | 94.12 | |
| TIGR03794 | 421 | NHPM_micro_HlyD NHPM bacteriocin system secretion | 94.12 | |
| KOG0811|consensus | 269 | 94.1 | ||
| KOG1655|consensus | 218 | 94.07 | ||
| KOG1854|consensus | 657 | 94.06 | ||
| cd07674 | 261 | F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/A | 94.06 | |
| PHA03332 | 1328 | membrane glycoprotein; Provisional | 94.03 | |
| PF02841 | 297 | GBP_C: Guanylate-binding protein, C-terminal domai | 94.0 | |
| PF08702 | 146 | Fib_alpha: Fibrinogen alpha/beta chain family; Int | 93.97 | |
| PTZ00332 | 589 | paraflagellar rod protein; Provisional | 93.97 | |
| COG4487 | 438 | Uncharacterized protein conserved in bacteria [Fun | 93.96 | |
| KOG2891|consensus | 445 | 93.92 | ||
| KOG0288|consensus | 459 | 93.89 | ||
| PF12072 | 201 | DUF3552: Domain of unknown function (DUF3552); Int | 93.88 | |
| PF04100 | 383 | Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 | 93.87 | |
| PHA02607 | 454 | wac fibritin; Provisional | 93.84 | |
| COG4026 | 290 | Uncharacterized protein containing TOPRIM domain, | 93.81 | |
| PF08702 | 146 | Fib_alpha: Fibrinogen alpha/beta chain family; Int | 93.75 | |
| KOG0972|consensus | 384 | 93.73 | ||
| PF11802 | 268 | CENP-K: Centromere-associated protein K; InterPro: | 93.7 | |
| TIGR03794 | 421 | NHPM_micro_HlyD NHPM bacteriocin system secretion | 93.7 | |
| KOG2180|consensus | 793 | 93.68 | ||
| KOG3771|consensus | 460 | 93.68 | ||
| PF05266 | 190 | DUF724: Protein of unknown function (DUF724); Inte | 93.65 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 93.65 | |
| COG3352 | 157 | FlaC Putative archaeal flagellar protein C [Cell m | 93.65 | |
| KOG1854|consensus | 657 | 93.64 | ||
| PF03999 | 619 | MAP65_ASE1: Microtubule associated protein (MAP65/ | 93.59 | |
| PRK12705 | 508 | hypothetical protein; Provisional | 93.57 | |
| KOG3215|consensus | 222 | 93.54 | ||
| COG3264 | 835 | Small-conductance mechanosensitive channel [Cell e | 93.53 | |
| KOG0811|consensus | 269 | 93.47 | ||
| KOG0288|consensus | 459 | 93.46 | ||
| KOG0040|consensus | 2399 | 93.44 | ||
| KOG2751|consensus | 447 | 93.41 | ||
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 93.4 |
| >KOG0994|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=0 Score=3257.68 Aligned_cols=1745 Identities=47% Similarity=0.951 Sum_probs=1670.1
Q ss_pred chHHHHHHHHHHHHHhhhhcccCCCCC-CCCCCccccCCccccccCCCCceeecccCCCCCCccceeecccCCCcccccc
Q psy2547 6 VPLWLCVVGLLVIFQVTYVTCQLPQPI-SSCERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTC 84 (1807)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~c~~~~c~p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c 84 (1807)
.++|.+.++||.+.++. +..+.|..+ .+|++++|||++||||+||..+|+|+||||+++||+||++||+++.++||+|
T Consensus 2 ~l~~~~~l~lL~~~~~~-~~~q~p~q~~~~c~~~sCyP~tGnLliGR~~~L~AsSTCGl~~pe~yCi~Shlqdq~KCf~C 80 (1758)
T KOG0994|consen 2 RLPSCLRLLLLSLCLVA-VAGQSPAQQVSGCSRGSCYPATGNLLIGRARKLTASSTCGLNKPERYCIVSHLQDQKKCFKC 80 (1758)
T ss_pred CchHHHHHHHHHHHHHh-hhccCCcccCCccccCCcCCCccceeecchhheeecccccCCCCcceEEeeccccccccccc
Confidence 34555544444333332 234444433 3799999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCccccccccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCC
Q psy2547 85 NSSPRFDNNPAFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKT 164 (1807)
Q Consensus 85 ~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~ 164 (1807)
|++.|+...++.+|.|+|||++|.|+ .+.|||||+|++++|||+|||+++||||||||+|+||||++|+||||.|||+|
T Consensus 81 dsr~p~~~~~~pshrienVvss~~p~-r~~~WWQSengv~~vtIQLDLEAEFhFTHLImtFktfRPAAMliERS~DFGkT 159 (1758)
T KOG0994|consen 81 DSRYPHKAHLNPSHRIENVVSSFAPP-RNITWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKT 159 (1758)
T ss_pred cCCCccccCCChhhhhhhhhhccCCC-cccchhhcccCCCcceEEeehhhheeeeeeeEeeccCCcceeeeeeccccccc
Confidence 99999944444499999999999986 66799999999999999999999999999999999999999999999999999
Q ss_pred ccchhhhHhhhhhhCCCCCCCCCCCCCcccccccCCCCCCCCCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeee
Q psy2547 165 WQVYRYFAADCAKSFPGIPRDGLRKLTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINF 244 (1807)
Q Consensus 165 w~~~qy~a~~C~~~f~~~~~~~~~~~~~~~c~~~~s~~~p~~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~ 244 (1807)
|.||+|||+||..+||++|.+++++++||||||+||++.|+++|||||++|+|+++++ ||||++||+.++||||||+|
T Consensus 160 W~vYrYFAyDC~asFPGv~~~~~kk~~DviCtSrYS~~~PstgGEVifrvl~P~~~ie--dPYs~~IQ~~LKITNLRvn~ 237 (1758)
T KOG0994|consen 160 WHVYRYFAYDCSATFPGVPTGPPKKWDDVICTSRYSDPEPSTGGEVIFRVLDPAIDIE--DPYSAKIQELLKITNLRVNF 237 (1758)
T ss_pred ceeeeeeecccccCCCCCCCCCcccccceeeecccCCCCCCCCCeEEEEecCCCCCCC--CchhHHHHHHhhhhheeeee
Confidence 9999999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred cccccCCCccccccccccceeeEEeeceeeeeccccccCccccccCCCCCC-----CCCCccccccCCCCCCCCCCcccc
Q psy2547 245 TKLHTLGDDLLDTRRQIQEKYYYAITQMIVRGSCSCYGHASRCLPISEADT-----KPDMVHGRCECTHNTQGLNCEKCI 319 (1807)
Q Consensus 245 ~~~~t~~~~~~~~~~~~~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~-----~~~~~~~~C~C~hnt~G~~Ce~C~ 319 (1807)
+|+||+|++++|.|.++.++||||||||+|+|+|+|||||++|.|.++... +..||||+|+|+|||+|+|||+|.
T Consensus 238 tklhtlgdnllD~r~E~~ekyyYAiy~~vVrGsCfCyGHAs~C~P~~g~~s~~~~~ta~mVHG~C~C~HNT~G~nCE~C~ 317 (1758)
T KOG0994|consen 238 TKLHTLGDNLLDSREEIREKYYYAIYDLVVRGSCFCYGHASQCAPVDGARSAKAPGTAHMVHGRCMCKHNTAGLNCEHCA 317 (1758)
T ss_pred EeeccccccccccccccccchhheeeeeeeecceeecCchhhcccCCCCCcccCCCccceecceeEeccCCCCCChHHhh
Confidence 999999999999999999999999999999999999999999999998762 335999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCcCCCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCCCCCC
Q psy2547 320 DFYNDLPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPE 399 (1807)
Q Consensus 320 ~~~~~~p~~~~~~~~~~~C~~C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~~ 399 (1807)
|||||+||+||.|.++|+|++|+||+||.+||||++||.++|+++||||++|+|||+|.|||+|+|+|||+|.+++++|+
T Consensus 318 ~fYnDlPWrpAeG~~~neCrkC~CNgHa~sCHFD~aV~~ASG~vSGGVCDdCqHNT~G~~CE~CkP~fYRdprr~i~~p~ 397 (1758)
T KOG0994|consen 318 PFYNDLPWRPAEGKTSNECRKCECNGHADTCHFDMAVYEASGNVSGGVCDDCQHNTEGQNCERCKPFFYRDPRRDISDPD 397 (1758)
T ss_pred HhhcCCCCCccCCCCcccccccCCCCCcccccccHHHHhhcCCcccccCccccccccccchhhcCcccccCCCCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCCCCCCCCCccCCCCCCC--cCCcccccCCCCCCCCCCcCCCCcccCCCCCCCCcccCCCCCCCCcCCCCCCC
Q psy2547 400 VCLRCDCDPGGSLDDGICDPYTDDV--LVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTINSQGCNK 477 (1807)
Q Consensus 400 ~C~~C~C~~~gs~~~~~C~~~~~~~--~~~G~C~Ck~~~~G~~Cd~C~~g~~~~~~~~~~gC~~C~C~~~Gs~~~~~Cd~ 477 (1807)
+|+||+|||.||.+.|.||.+.|++ .+.|+|.||++|.|+|||+|++|||||+..||.||.+|.||+.||+++++||+
T Consensus 398 vC~pC~CdP~GS~~~g~cds~~Dp~~GlvaGqC~CK~~V~G~RCd~Ck~Gywgl~~~dp~GC~~C~CN~lGT~~~s~CD~ 477 (1758)
T KOG0994|consen 398 VCKPCECDPAGSQDGGICDSFCDPSTGLVAGQCRCKEHVAGRRCDRCKDGYWGLTSADPYGCRPCDCNPLGTRNGSGCDP 477 (1758)
T ss_pred ccccccCCCCcCcCCCccccccCccccccccccccccCcCccccchhccCcccCccCCCCCccccccccccccCCCCCCC
Confidence 9999999999999999999999988 68899999999999999999999999999999999999999999999888999
Q ss_pred CCCCcccCCCcCCCCcCcccCCccccCCcCCCCcccCCCCCCCCCCCCCcccCCcccccCCCCCCCCCCCCCccccCCCC
Q psy2547 478 DTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCSTPEQSYYSPPYD 557 (1807)
Q Consensus 478 ~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~~C~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~~~~g~~~~~~~ 557 (1807)
.||.|.||+.|+|+.||+|.|+||+|+++. .||.||+||.|||+++.|+.++|||.||+++.||+|.++.+|||.+.|+
T Consensus 478 ~TG~C~ckrlvTg~~cdqclPeh~gLs~~~-~gc~~cdcd~GGs~d~sc~~~sGqC~CRe~~~GR~c~~~~~~yy~~~l~ 556 (1758)
T KOG0994|consen 478 ETGDCYCKRLVTGIDCDQCLPEHWGLSNDL-EGCRPCDCDQGGSYDNSCDLHSGQCECREHMLGRRCEQVCPGYYSPVLD 556 (1758)
T ss_pred CCCceEeeccccCCCccccCccccccCCCC-CCCcccccCCCCCCCcccccccCccccccccccccccccCCcccccccc
Confidence 999999999999999999999999999876 9999999999999999999999999999999999999999999999999
Q ss_pred CcccccccCcccCCceEEEeccCCCCCCCCcccCCccccccCCCeeEEEeccCCCCCcceEEEEeccCCCCccceeeEEE
Q psy2547 558 NFLYEAENANCKTDKCVVEIRQPLGGGNENTWTGPGFMKGFENTGLVFEIDNIPTPMDYDIVVRYEPVTNTDWENVDVIV 637 (1807)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 637 (1807)
|++||||+... .....++.|..+......+|+|.||+++++|+.+.|++..||.+|.|+|+|||+|..|..|+.+.|+|
T Consensus 557 h~i~eAe~~~~-~~~~~v~~r~~~~~~~~~sftG~gf~r~~e~~~l~f~~~~ip~sm~Ydv~ir~~~~~~~~wen~~itv 635 (1758)
T KOG0994|consen 557 HYIYEAEDAGT-GVEVNVKERKVLKSTKLPSFTGKGFVRVPEGTTLEFTVPIIPPSMEYDVLIRYDPRTPKLWENAKITV 635 (1758)
T ss_pred hhhhhhhhccc-cceeeeeeeeecccCCCccccccceeecCCCceeeeecCCCCcccccchheeccCCCcchhhhheEEe
Confidence 99999999865 45556666766455577899999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccCCCCCCCCCCCCCcceEEecCCCcceeecCCcccCCCceEEEEEEeecCCCCCCCCCcceeEeeeEeccCccc
Q psy2547 638 EREGNVDINGPCGNAVPQDDIKRTRLPVGSRAVKVYPPACLEPGKKYKVHLIFHQDNNGTTGPSASILIDSIALLPNIQS 717 (1807)
Q Consensus 638 ~~~~~~~~~~~c~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 717 (1807)
.+|+. ++.+.|+..+|.++.+.++|++++||++++++|||+.|+.|+++|.|.+.+....+|.+ ||||++|+|++.+
T Consensus 636 qrp~~-p~~g~c~~~~~~dd~~~~sl~p~sRyvv~~~~vClE~G~~Yklri~~~~~~~~~esp~a--LiDSl~L~P~~~~ 712 (1758)
T KOG0994|consen 636 QRPGQ-PSLGRCGMAIPKDDRIPFSLPPGSRYVVAPNPVCLEAGKVYKLRIYFERKSHDVESPYA--LIDSLVLIPRIDV 712 (1758)
T ss_pred ecCCC-CcccccccccccccccccccCCCceeeecCCchhhccCcceEEEEEeccccCCcccchh--hhhhhhhcccccc
Confidence 99998 78899999999999999999999999999999999999999999999985544444444 9999999999999
Q ss_pred cccccCCchhhhhhccccccccCcccccccCCCCchhhhcccccCCccccCCCccCCCCCCCCCCCcccCCCCcccCCCC
Q psy2547 718 IPFFQGPENFERAREFDHYRCGDSYITVYRGVPIPEACKKQHYSIGMYVHHGANECDCDPTGSTSKYCDQLGGNCVCKPN 797 (1807)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~c~~~~~s~~~~~~~g~~~c~C~~~gs~~~~c~~~~g~C~C~~~ 797 (1807)
+++|+|+. ...+.+|++|+| +++.++++. ++.+.|.++.+++++++|+++.+|+|||+||+|.+|++.+|||.|+||
T Consensus 713 l~iFqg~~-~a~~~~yerYqC-~~sl~~~k~-~~~e~C~~l~~~lsa~l~n~a~~CnCnptGSlS~vCn~~GGqCqCkPn 789 (1758)
T KOG0994|consen 713 LPIFQGSV-LADKKTYERYQC-ESSLSDMKT-KSDEVCQNLDNSLSALLHNGASMCNCNPTGSLSSVCNPNGGQCQCKPN 789 (1758)
T ss_pred ccccccch-hhhhHHHHHhhh-hhccccccc-CcchhhhhhhhhHHHHHhcCccccccCCCccccccccCCCceecccCc
Confidence 99999985 334999999999 555566666 789999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcCCCCCCCcCCCCCCCCCCCCcccCCCCcccCCCCccCCCCCCCCCCCCCCCCCccCCCCCCCCCCC
Q psy2547 798 VVGRRCDRCAPGTYGFGPEGCKACDCNHVGALDNICDVVSGQCKCRAQTYGRECDQCSPGYWNYPTCQRCICNGHADLCD 877 (1807)
Q Consensus 798 ~~G~~C~~C~~g~~~~~~~~C~~C~C~~~g~~~~~C~~~~g~C~C~~g~~G~~C~~C~~g~~~~~~C~~C~C~~~~~~Cd 877 (1807)
++|++||+|+||+|||+|.||++|+|+..||++..||.+||||.|++|++|+.|++|+|||||||.|+||+||||+++||
T Consensus 790 VVGR~CdqCApGtyGFGPsGCk~CdC~~~Gs~~~~Cd~~tGQC~C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd 869 (1758)
T KOG0994|consen 790 VVGRRCDQCAPGTYGFGPSGCKACDCNSIGSLDKYCDKITGQCQCRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCD 869 (1758)
T ss_pred cccccccccCCcccCcCCccCccccccccccccccccccccceeeccccchhhccccCCCccCCCcCccccccCcccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccCCCCCccCCCCCcCCCCcccCCCCCCCCCCcCCCCCCCCCCCCccCCccccCCCCCceeeecCCCCcCCCCCC
Q psy2547 878 SKTGTCISCRNSTDGENCERCINGYYGDPRLGIDIPCRPCPCPGTVESGLSYADTCQLDPRSQDVICECKEGYRGTRCDG 957 (1807)
Q Consensus 878 ~~tg~C~~C~~~~~G~~Ce~C~~G~~G~~~~~~~~~C~~c~C~~~~~~~~~~~~~C~~~~~~~~~~C~C~~g~~G~~Ce~ 957 (1807)
+.||.|+.|++.|+|.+|++|.+||||+|..|+++.|+|||||.++.||.+|+.+|++++++.+.+|+|.+||+|.+|+.
T Consensus 870 ~~tGaCi~CqD~T~G~~CdrCl~GyyGdP~lg~g~~CrPCpCP~gp~Sg~~~A~sC~~d~~t~~ivC~C~~GY~G~RCe~ 949 (1758)
T KOG0994|consen 870 PITGACIDCQDSTTGHSCDRCLDGYYGDPRLGSGIGCRPCPCPDGPASGRQHADSCYLDTRTQQIVCHCQEGYSGSRCEI 949 (1758)
T ss_pred ccccccccccccccccchhhhhccccCCcccCCCCCCCCCCCCCCCccchhccccccccccccceeeecccCccccchhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccCCCCCCCCCCCcccCCCCCCcccCCCCCCcCCCCCCCC
Q psy2547 958 CLDNYFGNPQERGGSCEPCDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNALEQNCTECTCNILGIDH 1037 (1807)
Q Consensus 958 C~~g~~g~p~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~~~~G~~C~~C~~G~~G~~~~~~C~~C~C~~~g~~~ 1037 (1807)
|++||||+|.. ||+|++|+|+||||+.+++.||..||.||+|++.|+|.||+.|.+||||++..++|+.|.|+..||++
T Consensus 950 CA~~~fGnP~~-GGtCq~CeC~~NiD~~d~~aCD~~TG~CLkCL~hTeG~hCe~Ck~Gf~GdA~~q~CqrC~Cn~LGTn~ 1028 (1758)
T KOG0994|consen 950 CADNHFGNPSE-GGTCQKCECSNNIDLYDPGACDVATGACLKCLYHTEGDHCEHCKDGFYGDALRQNCQRCVCNFLGTNS 1028 (1758)
T ss_pred hcccccCCccc-CCccccccccCCcCccCCCccchhhchhhhhhhcccccchhhccccchhHHHHhhhhhheccccccCC
Confidence 99999999998 99999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcCCCCccccCCCcccccccccCCCCcccCCCCCCCCCCCCCCCCCCCCCccCCCCccccCCCcccCCCCcCCCCc
Q psy2547 1038 SKGPCDRTTGQCPCLPNVIGVSCDRCLKNHWKIASGTGCEPCDCDPIGSVDVTECNEYTGQCQCKSGFGGRQCDQCQTNF 1117 (1807)
Q Consensus 1038 ~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~~~C~~c~C~~~gs~~~~~C~~~tg~C~C~~g~~G~~C~~C~~g~ 1117 (1807)
. +.||++||||+|+||+.|.+||+|+++||+++||.||++|.|++.| ++ +||.+||||+|+|||+|+.|++|.+-|
T Consensus 1029 ~-~~CDr~tGQCpClpNv~G~~CDqCA~N~w~laSG~GCe~C~Cd~~~--~p-qCN~ftGQCqCkpGfGGR~C~qCqel~ 1104 (1758)
T KOG0994|consen 1029 T-CHCDRFTGQCPCLPNVQGVRCDQCAENHWNLASGEGCEPCNCDPIG--GP-QCNEFTGQCQCKPGFGGRTCSQCQELY 1104 (1758)
T ss_pred c-cccccccCcCCCCcccccccccccccchhccccCCCCCccCCCccC--Cc-cccccccceeccCCCCCcchhHHHHhh
Confidence 8 9999999999999999999999999999999999999999999965 67 999999999999999999999999999
Q ss_pred cCCCCCCCccCCCCCCCCCCCccccCCceEeccCCccccCCCcCCCCCccCCCCCCCCCCcccchhhhhHhHHHhHHHHH
Q psy2547 1118 WGNPNVECFPCDCDPSGSATSQCHQNNGTCVCHQGIGGVRCDTCARGYIGTAPDCSPCGECFDNWDSILRGLADQTTKVI 1197 (1807)
Q Consensus 1118 ~g~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~g~~G~~C~~C~~g~~~~~~~C~~C~~c~~~~~~~~~~~~~~~~~l~ 1197 (1807)
||+|..+|++|+|++.|+.+++||+.||+|.|+||++|.+||+|++||.|.+|.|.||++||+.||.++.+|.+++.+|+
T Consensus 1105 WGdP~~~C~aCdCd~rG~~tpQCdr~tG~C~C~~Gv~G~rCdqCaRgy~G~fP~C~PCh~CF~~WD~il~~L~~rt~rl~ 1184 (1758)
T KOG0994|consen 1105 WGDPNEKCRACDCDPRGIETPQCDRATGRCVCRPGVGGPRCDQCARGYSGQFPVCVPCHECFQTWDAILQELALRTHRLI 1184 (1758)
T ss_pred cCCCCCCceecCCCCCCCCCCCccccCCceeecCCCCCcchhhhhhhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccccCCCcchhHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHhh-hccCCchhhhhhhhhhHHHHHH
Q psy2547 1198 TDASNIKQTGASGAYTKEFELLEKKIEDVKALVENTTRSSHDLTVMLTTIDDMKKQI-MNNEDPNGVGKTLGNTTQRINL 1276 (1807)
Q Consensus 1198 ~~~~~~~~~~~~~~~~~~~~~le~~l~~lq~lL~~~~~~~~~~~~l~~~l~~l~~~l-~~~~~l~~~e~~l~~~~~~~~~ 1276 (1807)
.+++.|+.+|+.++|..+|.+++++|++|+.+|+..+.+...+++|.+.++.|+++| ...+.|.+++..|.++.+.+..
T Consensus 1185 ~~A~~l~~tGv~gay~s~f~~me~kl~~ir~il~~~svs~~~i~~l~~~~~~lr~~l~~~~e~L~~~E~~Lsdi~~~~~~ 1264 (1758)
T KOG0994|consen 1185 NRAKELKQTGVLGAYASRFLDMEEKLEEIRAILSAPSVSAEDIAQLASATESLRRQLQALTEDLPQEEETLSDITNSLPL 1264 (1758)
T ss_pred HHHHHhhhccCchhhHhHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccch
Confidence 999999999999999999999999999999999999999999999999999999999 8889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy2547 1277 ARLALNDLTEEIKKLNKTGEMLKENATLLQENNVEGALELTRQAHDTSLKLKEQSTETEKQINDAERQCKRTENLVTKTF 1356 (1807)
Q Consensus 1277 ~~~~le~L~~el~~l~~~~~~l~~~~~~l~~~~~~~a~~~~~~a~~~~~~a~~~~~~~~~~i~~a~~~~~~a~~ll~~~~ 1356 (1807)
+.++|+.|+++...++..+.+|+++++++++.++.+|+++++.+++++.+++++++++...+....++. +++.+|++.+
T Consensus 1265 a~~~LesLq~~~~~l~~~~keL~e~~~~ik~sdi~GA~~~~r~a~~~s~ea~~r~~~s~~~l~s~~~~s-R~e~l~~k~k 1343 (1758)
T KOG0994|consen 1265 AGKDLESLQREFNGLLTTYKELREQLEKIKESDILGAFNSTRHAYEQSAEAERRVDASSRELASLVDQS-RVEELLVKQK 1343 (1758)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHHHHHHHHhhhhhhhcccchhhhh-HHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999998877776666655 8899999999
Q ss_pred hHhhhhHHHHHHHHHHHHHHHHhhhcccchhHHHhhccCCCCCCCCCCCCCCC---CCCCcccCCchhHHHHHHHHHHHH
Q psy2547 1357 PQFTQGQEENEKALQRLNEKITSLEKNLPDLNELICDKRGDPCDNLCGGAGCG---KCGGMWCSNGTLSESNSAKDYAET 1433 (1807)
Q Consensus 1357 ~~~~~~~~e~~~~L~~L~~kL~~l~~~L~~l~~~icg~~~~~C~~~Cgg~~C~---~Cgg~~C~~~a~~~a~~A~~~a~~ 1433 (1807)
.+|+. +.+++.+|.+|+.+|..|. |+++++++||++++||+++|||+||+ .|||++| .||++.|++|+.+|.+
T Consensus 1344 ~~f~~-~~~n~~~L~el~~~l~sL~--L~~lne~vCG~p~apC~s~CGG~gC~~~~~cGg~sC-~Ga~t~A~~A~~~A~~ 1419 (1758)
T KOG0994|consen 1344 GDFGG-LAENSRLLVELRAELSSLP--LTPLNEQVCGAPGAPCDSLCGGAGCRQDGTCGGLSC-RGAVTRAGGALLMAGD 1419 (1758)
T ss_pred hcccc-cccccHHHHHHHHHhcCCC--CchhhHHhcCCCCCCCCCCCCCCCCCCCCCccCccc-cchhcccchHHHHhhh
Confidence 99988 7888999999999999998 99999999999999999999999986 8899999 5999999999999999
Q ss_pred hhHhhhhhHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1434 SKKLINEKESKAEELRKHMIILSESNSAKDYAETSKKLINEKEAKAEEVFRGITTAKQESHAANILAKEAYDHAASVRNK 1513 (1807)
Q Consensus 1434 l~~~i~e~~~~~eeL~~~~~~~~~~~~a~~~ae~a~~~l~~~~~~~~~l~~~~~~~~~~~~~a~~~A~~~~~~a~~~~~~ 1513 (1807)
+...|..+.++++++++.+.+++.++.+|+++|++++++++..+++
T Consensus 1420 ----------------------------------~~~~l~~~~ae~eq~~~~v~ea~~~aseA~~~Aq~~~~~a~as~~q 1465 (1758)
T KOG0994|consen 1420 ----------------------------------ADTQLRSKLAEAEQTLSMVREAKLSASEAQQSAQRALEQANASRSQ 1465 (1758)
T ss_pred ----------------------------------HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 6666777778888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCChHHHHHHhHHhhhhccCCCHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy2547 1514 TAAYVASTSNITKQLDEFLNAPGATLADIRNISGLAVNKNIQSNPEQIRERANEINNVIKSLTDIDTILTETAGDLAKAN 1593 (1807)
Q Consensus 1514 ~e~~~~~~~~l~~~lk~~l~~~~~~~~~i~~la~~vl~~~i~~~~~~I~~l~~~i~~~~~~L~~~~~~l~~~~~~l~~a~ 1593 (1807)
+++...++++|+++|++||....++|+.|+++++.||+++||+++++|+.|..+|.+.+++|.+++.||.+++.++++|+
T Consensus 1466 ~~~s~~el~~Li~~v~~Flt~~~adp~si~~vA~~vL~l~lp~tpeqi~~L~~~I~e~v~sL~nVd~IL~~T~~di~ra~ 1545 (1758)
T KOG0994|consen 1466 MEESNRELRNLIQQVRDFLTQPDADPDSIEEVAEEVLALELPLTPEQIQQLTGEIQERVASLPNVDAILSRTKGDIARAE 1545 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhcccHHHHHHhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1594 DLKRKANLTKAGADSTKNTVQKIVDVLTEARTAQDMAEVAIQTAKDDISAARKDLSQITNDLDDAQQKSNETNVKVKLLQ 1673 (1807)
Q Consensus 1594 ~L~~~a~~a~~ea~~l~~~l~~l~~~L~~a~~~~~~a~~~l~~a~~~i~~~~~~l~~ie~~l~~~e~~l~~~e~~l~~l~ 1673 (1807)
.|+.+|++++++|+.++..++.|.++|++|+.++.+++++|+++...|+.+++.|.++++++..+|..+..+.++|.+|+
T Consensus 1546 ~L~s~A~~a~~~A~~v~~~ae~V~eaL~~Ad~Aq~~a~~ai~~a~~~~~~a~~~l~kv~~~t~~aE~~~~~a~q~~~eL~ 1625 (1758)
T KOG0994|consen 1546 NLQSEAERARSRAEDVKGQAEDVVEALEEADVAQGEAQDAIQGADRDIRLAQQLLAKVQEETAAAEKLATSATQQLGELE 1625 (1758)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q psy2547 1674 ERLKSIQAGFLQNGRSAMDVENEEKNLEKEVALAQKQASGLRSRYQETDNKLLSKAESSGLKRARGQMLLNKASQLSVNT 1753 (1807)
Q Consensus 1674 ~~le~lk~~l~~~~~~~~~a~~~ae~a~~~a~~ae~~l~el~~~l~~~~~~l~~~~~~l~~~~~r~~~l~~~a~~l~~~~ 1753 (1807)
.++++|+.++.++...++.|++.+..++.+|.++++.++.|.+.++.+++.++.+.+....++.|+++|+++|++|..++
T Consensus 1626 ~~~e~lk~~~~qns~~A~~a~~~a~sa~~~A~~a~q~~~~lq~~~~~~~~l~~~r~~g~~~ar~rAe~L~~eA~~Ll~~a 1705 (1758)
T KOG0994|consen 1626 TRMEELKHKAAQNSAEAKQAEKTAGSAKEQALSAEQGLEILQKYYELVDRLLEKRMEGSQAARERAEQLRTEAEKLLGQA 1705 (1758)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCC
Q psy2547 1754 TAKLKQLNETEAMFNSQESELTELSKNIAELQKRIQSCINFIVDKSNNYKNCV 1806 (1807)
Q Consensus 1754 ~~~~~~l~~Le~~i~~~e~~le~le~el~~L~~el~~l~~~I~~~~~~Y~tc~ 1806 (1807)
.+++++|++|+..+..++++|+.++++|..|+++|+++++.|.+++.+|+||.
T Consensus 1706 ~~kl~~l~dLe~~y~~~~~~L~~~~aeL~~Le~r~~~vl~~I~~rv~~y~tC~ 1758 (1758)
T KOG0994|consen 1706 NEKLDRLKDLELEYLRNEQALEDKAAELAGLEKRVESVLDHINERVLYYATCK 1758 (1758)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhccC
Confidence 99999999999999999999999999999999999999999999999999995
|
|
| >KOG1836|consensus | Back alignment and domain information |
|---|
| >KOG0994|consensus | Back alignment and domain information |
|---|
| >KOG3512|consensus | Back alignment and domain information |
|---|
| >KOG1836|consensus | Back alignment and domain information |
|---|
| >smart00136 LamNT Laminin N-terminal domain (domain VI) | Back alignment and domain information |
|---|
| >PF00055 Laminin_N: Laminin N-terminal (Domain VI); InterPro: IPR008211 Laminin is a large molecular weight glycoprotein present only in basement membranes in almost every animal tissue | Back alignment and domain information |
|---|
| >KOG3512|consensus | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG4289|consensus | Back alignment and domain information |
|---|
| >KOG4289|consensus | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0161|consensus | Back alignment and domain information |
|---|
| >KOG0161|consensus | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >KOG0996|consensus | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0933|consensus | Back alignment and domain information |
|---|
| >KOG0976|consensus | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG3509|consensus | Back alignment and domain information |
|---|
| >KOG4674|consensus | Back alignment and domain information |
|---|
| >KOG0996|consensus | Back alignment and domain information |
|---|
| >KOG4674|consensus | Back alignment and domain information |
|---|
| >KOG3509|consensus | Back alignment and domain information |
|---|
| >KOG0933|consensus | Back alignment and domain information |
|---|
| >PRK01156 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0964|consensus | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG0250|consensus | Back alignment and domain information |
|---|
| >KOG0250|consensus | Back alignment and domain information |
|---|
| >KOG0976|consensus | Back alignment and domain information |
|---|
| >KOG0964|consensus | Back alignment and domain information |
|---|
| >KOG0971|consensus | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex | Back alignment and domain information |
|---|
| >KOG4643|consensus | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >KOG0978|consensus | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4673|consensus | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >KOG4593|consensus | Back alignment and domain information |
|---|
| >KOG0018|consensus | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >PF13514 AAA_27: AAA domain | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >KOG0962|consensus | Back alignment and domain information |
|---|
| >KOG4643|consensus | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0018|consensus | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >KOG0962|consensus | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG4673|consensus | Back alignment and domain information |
|---|
| >KOG4593|consensus | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >PRK10246 exonuclease subunit SbcC; Provisional | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >KOG0979|consensus | Back alignment and domain information |
|---|
| >KOG0971|consensus | Back alignment and domain information |
|---|
| >KOG0612|consensus | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >KOG1225|consensus | Back alignment and domain information |
|---|
| >KOG0612|consensus | Back alignment and domain information |
|---|
| >KOG0995|consensus | Back alignment and domain information |
|---|
| >PTZ00121 MAEBL; Provisional | Back alignment and domain information |
|---|
| >PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells | Back alignment and domain information |
|---|
| >KOG1225|consensus | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >KOG0517|consensus | Back alignment and domain information |
|---|
| >PF15450 DUF4631: Domain of unknown function (DUF4631) | Back alignment and domain information |
|---|
| >PF15450 DUF4631: Domain of unknown function (DUF4631) | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG0977|consensus | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG1003|consensus | Back alignment and domain information |
|---|
| >KOG0999|consensus | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG0979|consensus | Back alignment and domain information |
|---|
| >KOG0999|consensus | Back alignment and domain information |
|---|
| >PF07111 HCR: Alpha helical coiled-coil rod protein (HCR); InterPro: IPR009800 This family consists of several mammalian alpha helical coiled-coil rod HCR proteins | Back alignment and domain information |
|---|
| >KOG0517|consensus | Back alignment and domain information |
|---|
| >KOG0963|consensus | Back alignment and domain information |
|---|
| >KOG0995|consensus | Back alignment and domain information |
|---|
| >cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >KOG1003|consensus | Back alignment and domain information |
|---|
| >COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977|consensus | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0963|consensus | Back alignment and domain information |
|---|
| >PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029|consensus | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0946|consensus | Back alignment and domain information |
|---|
| >smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai | Back alignment and domain information |
|---|
| >KOG0946|consensus | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >KOG1218|consensus | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies | Back alignment and domain information |
|---|
| >KOG1029|consensus | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >KOG1219|consensus | Back alignment and domain information |
|---|
| >PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms | Back alignment and domain information |
|---|
| >PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1218|consensus | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00618 sbcc exonuclease SbcC | Back alignment and domain information |
|---|
| >COG4717 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG0243|consensus | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >TIGR01612 235kDa-fam reticulocyte binding/rhoptry protein | Back alignment and domain information |
|---|
| >PF03148 Tektin: Tektin family; InterPro: IPR000435 Tektin heteropolymers form unique protofilaments of flagellar microtubules [] | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG4809|consensus | Back alignment and domain information |
|---|
| >PTZ00440 reticulocyte binding protein 2-like protein; Provisional | Back alignment and domain information |
|---|
| >COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG4809|consensus | Back alignment and domain information |
|---|
| >PF14915 CCDC144C: CCDC144C protein coiled-coil region | Back alignment and domain information |
|---|
| >KOG1937|consensus | Back alignment and domain information |
|---|
| >PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PTZ00440 reticulocyte binding protein 2-like protein; Provisional | Back alignment and domain information |
|---|
| >COG4717 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0980|consensus | Back alignment and domain information |
|---|
| >KOG1219|consensus | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG1226|consensus | Back alignment and domain information |
|---|
| >PF03148 Tektin: Tektin family; InterPro: IPR000435 Tektin heteropolymers form unique protofilaments of flagellar microtubules [] | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >COG4913 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG1226|consensus | Back alignment and domain information |
|---|
| >KOG2685|consensus | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >smart00283 MA Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer) | Back alignment and domain information |
|---|
| >KOG1217|consensus | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0993|consensus | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG1937|consensus | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein) | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules | Back alignment and domain information |
|---|
| >PTZ00214 high cysteine membrane protein Group 4; Provisional | Back alignment and domain information |
|---|
| >PF05276 SH3BP5: SH3 domain-binding protein 5 (SH3BP5); InterPro: IPR007940 The SH3 domain-binding protein inhibits the auto and transphophorylation of BTK and acts as a negative regulator of BTK-related signalling in B cells | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >PF09728 Taxilin: Myosin-like coiled-coil protein; InterPro: IPR019132 Taxilin contains an extraordinarily long coiled-coil domain in its C-terminal half and is ubiquitously expressed | Back alignment and domain information |
|---|
| >PF12252 SidE: Dot/Icm substrate protein; InterPro: IPR021014 This entry represents bacterial proteins that are typically between 397 and 1543 amino acids in length including SidE protein in the Dot/Icm pathway of Legionella pneumophila bacteria | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG4260|consensus | Back alignment and domain information |
|---|
| >PRK15048 methyl-accepting chemotaxis protein II; Provisional | Back alignment and domain information |
|---|
| >PF13166 AAA_13: AAA domain | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd09235 V_Alix Middle V-domain of mammalian Alix and related domains are dimerization and protein interaction modules | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >KOG1388|consensus | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >TIGR01612 235kDa-fam reticulocyte binding/rhoptry protein | Back alignment and domain information |
|---|
| >PRK15041 methyl-accepting chemotaxis protein I; Provisional | Back alignment and domain information |
|---|
| >KOG2685|consensus | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >KOG1388|consensus | Back alignment and domain information |
|---|
| >PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >TIGR02977 phageshock_pspA phage shock protein A | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF05276 SH3BP5: SH3 domain-binding protein 5 (SH3BP5); InterPro: IPR007940 The SH3 domain-binding protein inhibits the auto and transphophorylation of BTK and acts as a negative regulator of BTK-related signalling in B cells | Back alignment and domain information |
|---|
| >PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules [] | Back alignment and domain information |
|---|
| >PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PRK10698 phage shock protein PspA; Provisional | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG1217|consensus | Back alignment and domain information |
|---|
| >PRK10698 phage shock protein PspA; Provisional | Back alignment and domain information |
|---|
| >PF15066 CAGE1: Cancer-associated gene protein 1 family | Back alignment and domain information |
|---|
| >cd09238 V_Alix_like_1 Protein-interacting V-domain of an uncharacterized family of the V_Alix_like superfamily | Back alignment and domain information |
|---|
| >cd09236 V_AnPalA_UmRIM20_like Protein-interacting V-domains of Aspergillus nidulans PalA/RIM20, Ustilago maydis RIM20, and related proteins | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >KOG1850|consensus | Back alignment and domain information |
|---|
| >KOG4302|consensus | Back alignment and domain information |
|---|
| >KOG2129|consensus | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >PF12795 MscS_porin: Mechanosensitive ion channel porin domain | Back alignment and domain information |
|---|
| >PF06548 Kinesin-related: Kinesin-related; InterPro: IPR010544 This entry represents a domain within kinesin-related proteins from higher plants | Back alignment and domain information |
|---|
| >PRK10869 recombination and repair protein; Provisional | Back alignment and domain information |
|---|
| >PF12795 MscS_porin: Mechanosensitive ion channel porin domain | Back alignment and domain information |
|---|
| >KOG0982|consensus | Back alignment and domain information |
|---|
| >KOG0249|consensus | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >smart00787 Spc7 Spc7 kinetochore protein | Back alignment and domain information |
|---|
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >KOG4438|consensus | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >KOG2008|consensus | Back alignment and domain information |
|---|
| >cd07653 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins | Back alignment and domain information |
|---|
| >KOG4572|consensus | Back alignment and domain information |
|---|
| >TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family | Back alignment and domain information |
|---|
| >KOG2991|consensus | Back alignment and domain information |
|---|
| >cd09234 V_HD-PTP_like Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >KOG2129|consensus | Back alignment and domain information |
|---|
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >KOG1853|consensus | Back alignment and domain information |
|---|
| >KOG1853|consensus | Back alignment and domain information |
|---|
| >KOG0992|consensus | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >KOG1899|consensus | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >TIGR02977 phageshock_pspA phage shock protein A | Back alignment and domain information |
|---|
| >PF04012 PspA_IM30: PspA/IM30 family; InterPro: IPR007157 This family includes PspA a protein that suppresses sigma54-dependent transcription | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >cd08915 V_Alix_like Protein-interacting V-domain of mammalian Alix and related domains | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >PTZ00214 high cysteine membrane protein Group 4; Provisional | Back alignment and domain information |
|---|
| >COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF01442 Apolipoprotein: Apolipoprotein A1/A4/E domain; InterPro: IPR000074 Exchangeable apolipoproteins (apoA, apoC and apoE) have the same genomic structure and are members of a multi-gene family that probably evolved from a common ancestral gene | Back alignment and domain information |
|---|
| >PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules [] | Back alignment and domain information |
|---|
| >COG1842 PspA Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF05384 DegS: Sensor protein DegS; InterPro: IPR008595 This is a group of Bacillus DegS proteins | Back alignment and domain information |
|---|
| >PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] | Back alignment and domain information |
|---|
| >KOG4360|consensus | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein) | Back alignment and domain information |
|---|
| >KOG4260|consensus | Back alignment and domain information |
|---|
| >PRK09793 methyl-accepting protein IV; Provisional | Back alignment and domain information |
|---|
| >PRK15048 methyl-accepting chemotaxis protein II; Provisional | Back alignment and domain information |
|---|
| >KOG1214|consensus | Back alignment and domain information |
|---|
| >PF13949 ALIX_LYPXL_bnd: ALIX V-shaped domain binding to HIV ; PDB: 2XS1_A 2XS8_A 2R03_A 2R02_A 2OEX_B 2OEV_A 2OJQ_A 2R05_A | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >KOG1899|consensus | Back alignment and domain information |
|---|
| >cd08915 V_Alix_like Protein-interacting V-domain of mammalian Alix and related domains | Back alignment and domain information |
|---|
| >KOG0992|consensus | Back alignment and domain information |
|---|
| >KOG0244|consensus | Back alignment and domain information |
|---|
| >PF15397 DUF4618: Domain of unknown function (DUF4618) | Back alignment and domain information |
|---|
| >KOG4286|consensus | Back alignment and domain information |
|---|
| >KOG0993|consensus | Back alignment and domain information |
|---|
| >KOG4360|consensus | Back alignment and domain information |
|---|
| >PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases | Back alignment and domain information |
|---|
| >COG3206 GumC Uncharacterized protein involved in exopolysaccharide biosynthesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG2008|consensus | Back alignment and domain information |
|---|
| >PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein | Back alignment and domain information |
|---|
| >PF05816 TelA: Toxic anion resistance protein (TelA); InterPro: IPR008863 This family consists of several prokaryotic TelA like proteins | Back alignment and domain information |
|---|
| >PF01540 Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR002520 This family consists of the p50 and variable adherence-associated antigen (Vaa) adhesins from Mycoplasma hominis | Back alignment and domain information |
|---|
| >PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional | Back alignment and domain information |
|---|
| >PTZ00332 paraflagellar rod protein; Provisional | Back alignment and domain information |
|---|
| >KOG4807|consensus | Back alignment and domain information |
|---|
| >cd09234 V_HD-PTP_like Protein-interacting V-domain of mammalian His-Domain type N23 protein tyrosine phosphatase and related domains | Back alignment and domain information |
|---|
| >PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >PF13870 DUF4201: Domain of unknown function (DUF4201) | Back alignment and domain information |
|---|
| >KOG0804|consensus | Back alignment and domain information |
|---|
| >KOG4302|consensus | Back alignment and domain information |
|---|
| >KOG4438|consensus | Back alignment and domain information |
|---|
| >KOG1214|consensus | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >TIGR01000 bacteriocin_acc bacteriocin secretion accessory protein | Back alignment and domain information |
|---|
| >cd09237 V_ScBro1_like Protein-interacting V-domain of Saccharomyces cerevisiae Bro1 and related domains | Back alignment and domain information |
|---|
| >PF14073 Cep57_CLD: Centrosome localisation domain of Cep57 | Back alignment and domain information |
|---|
| >KOG4460|consensus | Back alignment and domain information |
|---|
| >PF15294 Leu_zip: Leucine zipper | Back alignment and domain information |
|---|
| >KOG4677|consensus | Back alignment and domain information |
|---|
| >PRK15041 methyl-accepting chemotaxis protein I; Provisional | Back alignment and domain information |
|---|
| >KOG1850|consensus | Back alignment and domain information |
|---|
| >PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0244|consensus | Back alignment and domain information |
|---|
| >PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PF00754 F5_F8_type_C: F5/8 type C domain; InterPro: IPR000421 Blood coagulation factors V and VIII contain a C-terminal, twice repeated, domain of about 150 amino acids, which is called F5/8 type C, FA58C, or C1/C2- like domain | Back alignment and domain information |
|---|
| >KOG2991|consensus | Back alignment and domain information |
|---|
| >cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins | Back alignment and domain information |
|---|
| >KOG4787|consensus | Back alignment and domain information |
|---|
| >COG4913 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF04094 DUF390: Protein of unknown function (DUF390); InterPro: IPR007228 This domain is found in a family of long proteins that are currently found only in rice | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PF14073 Cep57_CLD: Centrosome localisation domain of Cep57 | Back alignment and domain information |
|---|
| >COG2433 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3595|consensus | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PRK15374 pathogenicity island 1 effector protein SipB; Provisional | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >cd07655 F-BAR_PACSIN The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons (PACSIN) proteins | Back alignment and domain information |
|---|
| >KOG0163|consensus | Back alignment and domain information |
|---|
| >cd07676 F-BAR_FBP17 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 17 | Back alignment and domain information |
|---|
| >KOG3647|consensus | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein | Back alignment and domain information |
|---|
| >PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms | Back alignment and domain information |
|---|
| >cd09236 V_AnPalA_UmRIM20_like Protein-interacting V-domains of Aspergillus nidulans PalA/RIM20, Ustilago maydis RIM20, and related proteins | Back alignment and domain information |
|---|
| >smart00806 AIP3 Actin interacting protein 3 | Back alignment and domain information |
|---|
| >PHA03246 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >KOG3958|consensus | Back alignment and domain information |
|---|
| >PF04912 Dynamitin: Dynamitin ; InterPro: IPR006996 Dynamitin is a subunit of the microtubule-dependent motor complex, it is also implicated in cell adhesion by binding to macrophage-enriched myristoylated alanine-rice C kinase substrate (MacMARCKS) [] | Back alignment and domain information |
|---|
| >smart00051 DSL delta serrate ligand | Back alignment and domain information |
|---|
| >PF14643 DUF4455: Domain of unknown function (DUF4455) | Back alignment and domain information |
|---|
| >cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2 | Back alignment and domain information |
|---|
| >PF14992 TMCO5: TMCO5 family | Back alignment and domain information |
|---|
| >PF00769 ERM: Ezrin/radixin/moesin family; InterPro: IPR011259 The ERM family consists of three closely-related proteins, ezrin, radixin and moesin [] | Back alignment and domain information |
|---|
| >PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae [] | Back alignment and domain information |
|---|
| >PF14817 HAUS5: HAUS augmin-like complex subunit 5 | Back alignment and domain information |
|---|
| >cd09235 V_Alix Middle V-domain of mammalian Alix and related domains are dimerization and protein interaction modules | Back alignment and domain information |
|---|
| >KOG0810|consensus | Back alignment and domain information |
|---|
| >cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here | Back alignment and domain information |
|---|
| >KOG4687|consensus | Back alignment and domain information |
|---|
| >PF15294 Leu_zip: Leucine zipper | Back alignment and domain information |
|---|
| >cd07653 F-BAR_CIP4-like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Cdc42-Interacting Protein 4 and similar proteins | Back alignment and domain information |
|---|
| >PF08614 ATG16: Autophagy protein 16 (ATG16); InterPro: IPR013923 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG4286|consensus | Back alignment and domain information |
|---|
| >PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin | Back alignment and domain information |
|---|
| >KOG0163|consensus | Back alignment and domain information |
|---|
| >PF09325 Vps5: Vps5 C terminal like; InterPro: IPR015404 Vps5 is a sorting nexin that functions in membrane trafficking | Back alignment and domain information |
|---|
| >PHA03332 membrane glycoprotein; Provisional | Back alignment and domain information |
|---|
| >PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae [] | Back alignment and domain information |
|---|
| >KOG1103|consensus | Back alignment and domain information |
|---|
| >cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here | Back alignment and domain information |
|---|
| >smart00051 DSL delta serrate ligand | Back alignment and domain information |
|---|
| >COG4192 Signal transduction histidine kinase regulating phosphoglycerate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5022 Myosin heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK09841 cryptic autophosphorylating protein tyrosine kinase Etk; Provisional | Back alignment and domain information |
|---|
| >COG3853 TelA Uncharacterized protein involved in tellurite resistance [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4807|consensus | Back alignment and domain information |
|---|
| >PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif | Back alignment and domain information |
|---|
| >KOG4403|consensus | Back alignment and domain information |
|---|
| >PF15358 TSKS: Testis-specific serine kinase substrate | Back alignment and domain information |
|---|
| >KOG0040|consensus | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG2196|consensus | Back alignment and domain information |
|---|
| >PTZ00464 SNF-7-like protein; Provisional | Back alignment and domain information |
|---|
| >COG5283 Phage-related tail protein [Function unknown] | Back alignment and domain information |
|---|
| >PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology | Back alignment and domain information |
|---|
| >PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp | Back alignment and domain information |
|---|
| >PF06637 PV-1: PV-1 protein (PLVAP); InterPro: IPR009538 This family consists of several PV-1 (PLVAP) proteins, which seem to be specific to mammals | Back alignment and domain information |
|---|
| >PF05478 Prominin: Prominin; InterPro: IPR008795 The prominins are an emerging family of proteins that, among the multispan membrane proteins, display a novel topology | Back alignment and domain information |
|---|
| >PF03915 AIP3: Actin interacting protein 3; InterPro: IPR022782 This entry represents a domain found in yeast actin interacting protein 3 and bud site selection protein 6 | Back alignment and domain information |
|---|
| >PF01540 Lipoprotein_7: Adhesin lipoprotein; InterPro: IPR002520 This family consists of the p50 and variable adherence-associated antigen (Vaa) adhesins from Mycoplasma hominis | Back alignment and domain information |
|---|
| >PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] | Back alignment and domain information |
|---|
| >PRK15178 Vi polysaccharide export inner membrane protein VexD; Provisional | Back alignment and domain information |
|---|
| >KOG3647|consensus | Back alignment and domain information |
|---|
| >PF14992 TMCO5: TMCO5 family | Back alignment and domain information |
|---|
| >smart00806 AIP3 Actin interacting protein 3 | Back alignment and domain information |
|---|
| >PF06548 Kinesin-related: Kinesin-related; InterPro: IPR010544 This entry represents a domain within kinesin-related proteins from higher plants | Back alignment and domain information |
|---|
| >KOG2220|consensus | Back alignment and domain information |
|---|
| >PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4 | Back alignment and domain information |
|---|
| >cd07666 BAR_SNX7 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 7 | Back alignment and domain information |
|---|
| >cd07680 F-BAR_PACSIN1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Protein kinase C and Casein kinase Substrate in Neurons 1 (PACSIN1) | Back alignment and domain information |
|---|
| >TIGR02302 aProt_lowcomp conserved hypothetical protein TIGR02302 | Back alignment and domain information |
|---|
| >PF15290 Syntaphilin: Golgi-localised syntaxin-1-binding clamp | Back alignment and domain information |
|---|
| >PF04582 Reo_sigmaC: Reovirus sigma C capsid protein; InterPro: IPR007662 Protein sigmaC in its native state was shown to be a homotrimer | Back alignment and domain information |
|---|
| >PF04740 LXG: LXG domain of WXG superfamily; InterPro: IPR006829 This group of putative transposases is found in Gram-positive bacteria, mostly Bacillus members and is thought to be a Cytosolic protein | Back alignment and domain information |
|---|
| >PF13779 DUF4175: Domain of unknown function (DUF4175) | Back alignment and domain information |
|---|
| >cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1 | Back alignment and domain information |
|---|
| >PF03915 AIP3: Actin interacting protein 3; InterPro: IPR022782 This entry represents a domain found in yeast actin interacting protein 3 and bud site selection protein 6 | Back alignment and domain information |
|---|
| >cd07664 BAR_SNX2 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 2 | Back alignment and domain information |
|---|
| >COG5074 t-SNARE complex subunit, syntaxin [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF05546 She9_MDM33: She9 / Mdm33 family; InterPro: IPR008839 Members of this family are mitochondrial inner membrane proteins with a role in inner mitochondrial membrane organisation and biogenesis [] | Back alignment and domain information |
|---|
| >COG3524 KpsE Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PHA03246 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >KOG2196|consensus | Back alignment and domain information |
|---|
| >KOG3958|consensus | Back alignment and domain information |
|---|
| >PF11559 ADIP: Afadin- and alpha -actinin-Binding; InterPro: IPR021622 This family is found in mammals where it is localised at cell-cell adherens junctions [], and in Sch | Back alignment and domain information |
|---|
| >PRK11519 tyrosine kinase; Provisional | Back alignment and domain information |
|---|
| >PF05278 PEARLI-4: Arabidopsis phospholipase-like protein (PEARLI 4); InterPro: IPR007942 This family contains several phospholipase-like proteins from Arabidopsis thaliana and other members of the Streptophyta which are homologous to PEARLI 4 | Back alignment and domain information |
|---|
| >PF10368 YkyA: Putative cell-wall binding lipoprotein; InterPro: IPR019454 The YkyA family of proteins contain a lipoprotein signal and a hydrolase domain | Back alignment and domain information |
|---|
| >PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >cd00057 FA58C Substituted updates: Jan 31, 2002 | Back alignment and domain information |
|---|
| >PF05262 Borrelia_P83: Borrelia P83/100 protein; InterPro: IPR007926 This family consists of several Borrelia P83/P100 antigen proteins | Back alignment and domain information |
|---|
| >COG5283 Phage-related tail protein [Function unknown] | Back alignment and domain information |
|---|
| >cd07667 BAR_SNX30 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 30 | Back alignment and domain information |
|---|
| >PF04740 LXG: LXG domain of WXG superfamily; InterPro: IPR006829 This group of putative transposases is found in Gram-positive bacteria, mostly Bacillus members and is thought to be a Cytosolic protein | Back alignment and domain information |
|---|
| >KOG1666|consensus | Back alignment and domain information |
|---|
| >PF05546 She9_MDM33: She9 / Mdm33 family; InterPro: IPR008839 Members of this family are mitochondrial inner membrane proteins with a role in inner mitochondrial membrane organisation and biogenesis [] | Back alignment and domain information |
|---|
| >KOG4687|consensus | Back alignment and domain information |
|---|
| >PF09738 DUF2051: Double stranded RNA binding protein (DUF2051); InterPro: IPR019139 This entry represents transcriptional repressors which preferentially bind to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA | Back alignment and domain information |
|---|
| >KOG4657|consensus | Back alignment and domain information |
|---|
| >PF05816 TelA: Toxic anion resistance protein (TelA); InterPro: IPR008863 This family consists of several prokaryotic TelA like proteins | Back alignment and domain information |
|---|
| >PF14988 DUF4515: Domain of unknown function (DUF4515) | Back alignment and domain information |
|---|
| >cd07652 F-BAR_Rgd1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Saccharomyces cerevisiae Rho GTPase activating protein Rgd1 and similar proteins | Back alignment and domain information |
|---|
| >PF09304 Cortex-I_coil: Cortexillin I, coiled coil; InterPro: IPR015383 This domain is predominantly found in the actin-bundling protein cortexillin I from Dictyostelium discoideum (Slime mold) | Back alignment and domain information |
|---|
| >KOG1655|consensus | Back alignment and domain information |
|---|
| >PF10368 YkyA: Putative cell-wall binding lipoprotein; InterPro: IPR019454 The YkyA family of proteins contain a lipoprotein signal and a hydrolase domain | Back alignment and domain information |
|---|
| >PTZ00464 SNF-7-like protein; Provisional | Back alignment and domain information |
|---|
| >COG3524 KpsE Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd07627 BAR_Vps5p The Bin/Amphiphysin/Rvs (BAR) domain of yeast Sorting Nexin Vps5p | Back alignment and domain information |
|---|
| >cd07596 BAR_SNX The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins | Back alignment and domain information |
|---|
| >PF06009 Laminin_II: Laminin Domain II; InterPro: IPR010307 It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure [] | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >cd07643 I-BAR_IMD_MIM Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis | Back alignment and domain information |
|---|
| >cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1 | Back alignment and domain information |
|---|
| >cd07648 F-BAR_FCHO The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only proteins | Back alignment and domain information |
|---|
| >PF04582 Reo_sigmaC: Reovirus sigma C capsid protein; InterPro: IPR007662 Protein sigmaC in its native state was shown to be a homotrimer | Back alignment and domain information |
|---|
| >cd09237 V_ScBro1_like Protein-interacting V-domain of Saccharomyces cerevisiae Bro1 and related domains | Back alignment and domain information |
|---|
| >PF13805 Pil1: Eisosome component PIL1; PDB: 3PLT_B | Back alignment and domain information |
|---|
| >TIGR02132 phaR_Bmeg polyhydroxyalkanoic acid synthase, PhaR subunit | Back alignment and domain information |
|---|
| >PF15035 Rootletin: Ciliary rootlet component, centrosome cohesion | Back alignment and domain information |
|---|
| >TIGR02971 heterocyst_DevB ABC exporter membrane fusion protein, DevB family | Back alignment and domain information |
|---|
| >PF07794 DUF1633: Protein of unknown function (DUF1633); InterPro: IPR012436 This family contains sequences derived from a group of hypothetical proteins expressed by Arabidopsis thaliana (Mouse-ear cress) | Back alignment and domain information |
|---|
| >PF13779 DUF4175: Domain of unknown function (DUF4175) | Back alignment and domain information |
|---|
| >PF15358 TSKS: Testis-specific serine kinase substrate | Back alignment and domain information |
|---|
| >TIGR02971 heterocyst_DevB ABC exporter membrane fusion protein, DevB family | Back alignment and domain information |
|---|
| >cd07675 F-BAR_FNBP1L The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Formin Binding Protein 1-Like | Back alignment and domain information |
|---|
| >PF04163 Tht1: Tht1-like nuclear fusion protein ; InterPro: IPR007292 Nuclear fusion protein KAR5 is an integral membrane protein that is thought to be required for the fusion of nuclear envelopes during karyogamy | Back alignment and domain information |
|---|
| >KOG0972|consensus | Back alignment and domain information |
|---|
| >PRK15178 Vi polysaccharide export inner membrane protein VexD; Provisional | Back alignment and domain information |
|---|
| >KOG4637|consensus | Back alignment and domain information |
|---|
| >PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology | Back alignment and domain information |
|---|
| >PF07889 DUF1664: Protein of unknown function (DUF1664); InterPro: IPR012458 The members of this family are hypothetical plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd09238 V_Alix_like_1 Protein-interacting V-domain of an uncharacterized family of the V_Alix_like superfamily | Back alignment and domain information |
|---|
| >PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A | Back alignment and domain information |
|---|
| >TIGR03794 NHPM_micro_HlyD NHPM bacteriocin system secretion protein | Back alignment and domain information |
|---|
| >KOG0811|consensus | Back alignment and domain information |
|---|
| >KOG1655|consensus | Back alignment and domain information |
|---|
| >KOG1854|consensus | Back alignment and domain information |
|---|
| >cd07674 F-BAR_FCHO1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of FCH domain Only 1 protein | Back alignment and domain information |
|---|
| >PHA03332 membrane glycoprotein; Provisional | Back alignment and domain information |
|---|
| >PF02841 GBP_C: Guanylate-binding protein, C-terminal domain; InterPro: IPR003191 Guanylate-binding protein is a GTPase that is induced by interferon (IFN)-gamma | Back alignment and domain information |
|---|
| >PF08702 Fib_alpha: Fibrinogen alpha/beta chain family; InterPro: IPR012290 Fibrinogen plays key roles in both blood clotting and platelet aggregation | Back alignment and domain information |
|---|
| >PTZ00332 paraflagellar rod protein; Provisional | Back alignment and domain information |
|---|
| >COG4487 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >KOG2891|consensus | Back alignment and domain information |
|---|
| >KOG0288|consensus | Back alignment and domain information |
|---|
| >PF12072 DUF3552: Domain of unknown function (DUF3552); InterPro: IPR022711 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
| >PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] | Back alignment and domain information |
|---|
| >PHA02607 wac fibritin; Provisional | Back alignment and domain information |
|---|
| >COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only] | Back alignment and domain information |
|---|
| >PF08702 Fib_alpha: Fibrinogen alpha/beta chain family; InterPro: IPR012290 Fibrinogen plays key roles in both blood clotting and platelet aggregation | Back alignment and domain information |
|---|
| >KOG0972|consensus | Back alignment and domain information |
|---|
| >PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC [] | Back alignment and domain information |
|---|
| >TIGR03794 NHPM_micro_HlyD NHPM bacteriocin system secretion protein | Back alignment and domain information |
|---|
| >KOG2180|consensus | Back alignment and domain information |
|---|
| >KOG3771|consensus | Back alignment and domain information |
|---|
| >PF05266 DUF724: Protein of unknown function (DUF724); InterPro: IPR007930 This family contains several uncharacterised proteins found exclusively in Arabidopsis thaliana | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >COG3352 FlaC Putative archaeal flagellar protein C [Cell motility and secretion] | Back alignment and domain information |
|---|
| >KOG1854|consensus | Back alignment and domain information |
|---|
| >PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins | Back alignment and domain information |
|---|
| >PRK12705 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG3215|consensus | Back alignment and domain information |
|---|
| >COG3264 Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG0811|consensus | Back alignment and domain information |
|---|
| >KOG0288|consensus | Back alignment and domain information |
|---|
| >KOG0040|consensus | Back alignment and domain information |
|---|
| >KOG2751|consensus | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1807 | ||||
| 4aqs_A | 525 | Laminin Beta1 Ln-Le1-4 Structure Length = 525 | 1e-175 | ||
| 4aqs_A | 525 | Laminin Beta1 Ln-Le1-4 Structure Length = 525 | 2e-23 | ||
| 4aqs_A | 525 | Laminin Beta1 Ln-Le1-4 Structure Length = 525 | 5e-19 | ||
| 4aqs_A | 525 | Laminin Beta1 Ln-Le1-4 Structure Length = 525 | 4e-11 | ||
| 2y38_A | 403 | Laminin Alpha5 Chain N-Terminal Fragment Length = 4 | 4e-44 | ||
| 2y38_A | 403 | Laminin Alpha5 Chain N-Terminal Fragment Length = 4 | 4e-07 | ||
| 4aqt_A | 375 | Laminin Gamma1 Ln-Le1-2 Structure Length = 375 | 1e-42 | ||
| 4aqt_A | 375 | Laminin Gamma1 Ln-Le1-2 Structure Length = 375 | 5e-05 | ||
| 1npe_B | 164 | Crystal Structure Of Nidogen/laminin Complex Length | 3e-28 | ||
| 1npe_B | 164 | Crystal Structure Of Nidogen/laminin Complex Length | 2e-11 | ||
| 1npe_B | 164 | Crystal Structure Of Nidogen/laminin Complex Length | 5e-05 | ||
| 1klo_A | 162 | Crystal Structure Of Three Consecutive Laminin-Type | 9e-27 | ||
| 1klo_A | 162 | Crystal Structure Of Three Consecutive Laminin-Type | 3e-11 | ||
| 1klo_A | 162 | Crystal Structure Of Three Consecutive Laminin-Type | 5e-05 | ||
| 3zyj_B | 426 | Netring1 In Complex With Ngl1 Length = 426 | 7e-19 | ||
| 3tbd_A | 338 | Crystal Structure Of Domain Vi And Le1 Of Human Net | 6e-13 | ||
| 3zyg_A | 353 | Netring2 Lam And Egf1 Domains Length = 353 | 1e-12 | ||
| 1tle_A | 58 | Le (Laminin-Type Egf-Like) Module Giii4 In Solution | 4e-08 |
| >pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure Length = 525 | Back alignment and structure |
|
| >pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure Length = 525 | Back alignment and structure |
| >pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure Length = 525 | Back alignment and structure |
| >pdb|4AQS|A Chain A, Laminin Beta1 Ln-Le1-4 Structure Length = 525 | Back alignment and structure |
| >pdb|2Y38|A Chain A, Laminin Alpha5 Chain N-Terminal Fragment Length = 403 | Back alignment and structure |
| >pdb|2Y38|A Chain A, Laminin Alpha5 Chain N-Terminal Fragment Length = 403 | Back alignment and structure |
| >pdb|4AQT|A Chain A, Laminin Gamma1 Ln-Le1-2 Structure Length = 375 | Back alignment and structure |
| >pdb|4AQT|A Chain A, Laminin Gamma1 Ln-Le1-2 Structure Length = 375 | Back alignment and structure |
| >pdb|1NPE|B Chain B, Crystal Structure Of Nidogen/laminin Complex Length = 164 | Back alignment and structure |
| >pdb|1NPE|B Chain B, Crystal Structure Of Nidogen/laminin Complex Length = 164 | Back alignment and structure |
| >pdb|1NPE|B Chain B, Crystal Structure Of Nidogen/laminin Complex Length = 164 | Back alignment and structure |
| >pdb|1KLO|A Chain A, Crystal Structure Of Three Consecutive Laminin-Type Epidermal Growth Factor-Like (Le) Modules Of Laminin Gamma1 Chain Harboring The Nidogen Binding Site Length = 162 | Back alignment and structure |
| >pdb|1KLO|A Chain A, Crystal Structure Of Three Consecutive Laminin-Type Epidermal Growth Factor-Like (Le) Modules Of Laminin Gamma1 Chain Harboring The Nidogen Binding Site Length = 162 | Back alignment and structure |
| >pdb|1KLO|A Chain A, Crystal Structure Of Three Consecutive Laminin-Type Epidermal Growth Factor-Like (Le) Modules Of Laminin Gamma1 Chain Harboring The Nidogen Binding Site Length = 162 | Back alignment and structure |
| >pdb|3ZYJ|B Chain B, Netring1 In Complex With Ngl1 Length = 426 | Back alignment and structure |
| >pdb|3TBD|A Chain A, Crystal Structure Of Domain Vi And Le1 Of Human Netrin-G2 Length = 338 | Back alignment and structure |
| >pdb|3ZYG|A Chain A, Netring2 Lam And Egf1 Domains Length = 353 | Back alignment and structure |
| >pdb|1TLE|A Chain A, Le (Laminin-Type Egf-Like) Module Giii4 In Solution At Ph 3.5 And 290 K, Nmr, 14 Structures Length = 58 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
Score = 503 bits (1297), Expect = e-162
Identities = 298/524 (56%), Positives = 370/524 (70%), Gaps = 9/524 (1%)
Query: 27 QLPQPISSCERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNS 86
Q P+ C SCYPATG+LLIGR KL +STCGLH +CIVS L++ KKCF C+S
Sbjct: 5 QEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDS 64
Query: 87 S-PRFDNNPAFSHKIHNIVYATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYF 145
P + SH I N+V P WWQSENGVENVTIQLD+EAEFHFTHLI+ F
Sbjct: 65 RDPYHETLNPDSHLIENVVTTFAPNRLK-IWWQSENGVENVTIQLDLEAEFHFTHLIMTF 123
Query: 146 KTFRPAAMLIERSHDFGKTWQVYRYFAADCAKSFPGIPRDGLRKLTDVYCESRYSSNNPS 205
KTFRPAAMLIERS DFGK W VYRYFA DC SFPGI ++K+ D+ C+SRYS PS
Sbjct: 124 KTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPGISTGPMKKVDDIICDSRYSDIEPS 183
Query: 206 SGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQIQEKY 265
+ GEVI R L P+ DPYS +QNL+K+TNLRI F KLHTLGD+LLD+R +I+EKY
Sbjct: 184 TEGEVIFRALDPAFKIE--DPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEIREKY 241
Query: 266 YYAITQMIVRGSCSCYGHASRCLPISEA-DTKPDMVHGRCECTHNTQGLNCEKCIDFYND 324
YYA+ M+VRG+C CYGHAS C P+ + MVHG C C HNT+GLNCE C+DFY+D
Sbjct: 242 YYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHD 301
Query: 325 LPWKPAFGSQTNACKQCNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCK 384
LPW+PA G +NACK+CNCN HS+ CHFD AV+ +TG +SGGVCD+C+HNT GRNCE+CK
Sbjct: 302 LPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCK 361
Query: 385 QYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPYTDDV--LVSGKCHCKPNVGGRRCD 442
++++ P ++ DP +C C CDP GS + GICD YTD L++G+C CK +V G RCD
Sbjct: 362 PFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCD 421
Query: 443 MCKDGFWNFNETNPNGCEPCTCNIQGTI-NSQGCNKDTGDCTCKRNVEGRDCNQCLPHFW 501
+CK+GF++ + +P GC+ C CN GTI C+ +TG C CKR V G+ C+QCLP W
Sbjct: 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHW 481
Query: 502 GLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCS 545
GLS + GC+PCDCD G + +N+C SGQC C PH GR C+
Sbjct: 482 GLSNDLD-GCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524
|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} Length = 375 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} Length = 403 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} Length = 426 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* Length = 338 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A Length = 162 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 Length = 119 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* Length = 423 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A Length = 284 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634 | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213 | Back alignment and structure |
|---|
| >1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213 | Back alignment and structure |
|---|
| >1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213 | Back alignment and structure |
|---|
| >1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A Length = 1213 | Back alignment and structure |
|---|
| >2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A* Length = 617 | Back alignment and structure |
|---|
| >2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A* Length = 617 | Back alignment and structure |
|---|
| >1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A* Length = 624 | Back alignment and structure |
|---|
| >1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A* Length = 624 | Back alignment and structure |
|---|
| >1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A* Length = 621 | Back alignment and structure |
|---|
| >1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A* Length = 621 | Back alignment and structure |
|---|
| >1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A* Length = 621 | Back alignment and structure |
|---|
| >3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B* Length = 913 | Back alignment and structure |
|---|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
| >2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897 | Back alignment and structure |
|---|
| >2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A Length = 155 | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791 | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791 | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791 | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A Length = 169 | Back alignment and structure |
|---|
| >3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A Length = 551 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A Length = 699 | Back alignment and structure |
|---|
| >2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens} Length = 486 | Back alignment and structure |
|---|
| >2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931 | Back alignment and structure |
|---|
| >2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens} Length = 1931 | Back alignment and structure |
|---|
| >1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X Length = 161 | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} Length = 189 | Back alignment and structure |
|---|
| >1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A Length = 608 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Length = 154 | Back alignment and structure |
|---|
| >3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens} Length = 424 | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217 | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A Length = 217 | Back alignment and structure |
|---|
| >3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A Length = 313 | Back alignment and structure |
|---|
| >3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A Length = 313 | Back alignment and structure |
|---|
| >1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 Length = 478 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 Length = 501 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1807 | |||
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 100.0 | |
| 2y38_A | 403 | Laminin subunit alpha-5; structural protein, cell | 100.0 | |
| 4aqt_A | 375 | Laminin subunit gamma-1; cell adhesion; HET: NAG B | 100.0 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 100.0 | |
| 3tbd_A | 338 | Netrin-G2, laminet-2; laminin N-terminal domain, d | 100.0 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 99.94 | |
| 4aqs_A | 525 | Laminin subunit beta-1; cell adhesion; HET: NAG BM | 99.94 | |
| 1klo_A | 162 | Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: | 99.93 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 99.7 | |
| 2gy5_A | 423 | Angiopoietin-1 receptor; ligand-binding domain, tr | 99.62 | |
| 2y38_A | 403 | Laminin subunit alpha-5; structural protein, cell | 99.62 | |
| 4aqt_A | 375 | Laminin subunit gamma-1; cell adhesion; HET: NAG B | 99.53 | |
| 3zyj_B | 426 | Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA | 99.5 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 99.44 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.36 | |
| 3k6s_B | 687 | Integrin beta-2; cell receptor, adhesion molecule, | 99.31 | |
| 2ygq_A | 324 | WIF-1, WNT inhibitory factor 1; signaling protein, | 99.31 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 99.29 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 99.29 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 99.27 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 99.24 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 99.23 | |
| 3fcs_B | 690 | Integrin beta-3; beta propeller, rossmann fold, EG | 99.23 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.12 | |
| 2vj2_A | 169 | Jagged-1; signalling, polymorphism, glycoprotein, | 99.07 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 98.47 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 98.44 | |
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 98.43 | |
| 2vj3_A | 135 | Neurogenic locus notch homolog protein 1; transcri | 98.42 | |
| 4d90_A | 143 | EGF-like repeat and discoidin I-like domain-conta | 98.38 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 98.26 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 98.23 | |
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 98.22 | |
| 4fbr_A | 267 | Lectin, myxobacterial hemagglutinin; beta-barrel, | 98.22 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 98.21 | |
| 3zx6_A | 341 | HAMP, methyl-accepting chemotaxis protein I; signa | 98.13 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 98.12 | |
| 2p28_B | 217 | Integrin beta-2; hybrid domain, PSI domain, I-EGF | 98.12 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 98.11 | |
| 3tbd_A | 338 | Netrin-G2, laminet-2; laminin N-terminal domain, d | 98.05 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 98.04 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 97.88 | |
| 3zx6_A | 341 | HAMP, methyl-accepting chemotaxis protein I; signa | 97.85 | |
| 1z1y_A | 186 | Ookinete surface protein PVS25; four EGF-like doma | 97.84 | |
| 2b9c_A | 147 | Striated-muscle alpha tropomyosin; alpha-helix, co | 97.8 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 97.73 | |
| 3o0z_A | 168 | RHO-associated protein kinase 1; coiled-coil, tran | 97.72 | |
| 4a3z_A | 161 | GH89_CBM32, alpha-N-acetylglucosaminidase family p | 97.67 | |
| 1hci_A | 476 | Alpha-actinin 2; triple-helix coiled coil, contrac | 97.63 | |
| 1hci_A | 476 | Alpha-actinin 2; triple-helix coiled coil, contrac | 97.6 | |
| 2b9c_A | 147 | Striated-muscle alpha tropomyosin; alpha-helix, co | 97.58 | |
| 1cii_A | 602 | Colicin IA; bacteriocin, ION channel formation, tr | 97.57 | |
| 1cii_A | 602 | Colicin IA; bacteriocin, ION channel formation, tr | 97.55 | |
| 4gkw_A | 167 | Spindle assembly abnormal protein 6; double helix, | 97.49 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 97.49 | |
| 1yo8_A | 634 | Thrombospondin-2; EGF, Ca(2+)-binding domains, lec | 97.43 | |
| 1tpg_A | 91 | T-plasminogen activator F1-G; plasminogen activati | 97.41 | |
| 3kbt_A | 326 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 97.38 | |
| 4hpq_C | 413 | ATG17, KLTH0D15642P; autophagy, protein transport; | 97.38 | |
| 3g67_A | 213 | Methyl-accepting chemotaxis protein; four-helix bu | 97.32 | |
| 1sjj_A | 863 | Actinin; 3-helix bundle, calponin homology domain, | 97.3 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 97.27 | |
| 3s84_A | 273 | Apolipoprotein A-IV; four helix bundle, transport | 97.25 | |
| 3edv_A | 323 | Spectrin beta chain, brain 1; spectrin repeat, coi | 97.23 | |
| 3s84_A | 273 | Apolipoprotein A-IV; four helix bundle, transport | 97.23 | |
| 2xs1_A | 704 | Programmed cell death 6-interacting protein; prote | 97.21 | |
| 3kbt_A | 326 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 97.2 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 97.18 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 97.15 | |
| 2efk_A | 301 | CDC42-interacting protein 4; EFC domain, structura | 97.13 | |
| 1u4q_A | 322 | Spectrin alpha chain, brain; alpha spectrin, three | 97.13 | |
| 4hpq_C | 413 | ATG17, KLTH0D15642P; autophagy, protein transport; | 97.13 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 97.09 | |
| 1u4q_A | 322 | Spectrin alpha chain, brain; alpha spectrin, three | 97.07 | |
| 3g67_A | 213 | Methyl-accepting chemotaxis protein; four-helix bu | 97.05 | |
| 2efl_A | 305 | Formin-binding protein 1; EFC domain, structural g | 97.04 | |
| 2ocy_A | 154 | RAB guanine nucleotide exchange factor SEC2; RAB, | 96.99 | |
| 2bou_A | 143 | EGF-like module containing mucin-like hormone rece | 96.95 | |
| 2wg3_C | 463 | Hedgehog-interacting protein; lipoprotein, develop | 96.9 | |
| 1qu7_A | 227 | Methyl-accepting chemotaxis protein I; serine, fou | 96.88 | |
| 1tvg_A | 153 | LOC51668 protein; cell cycle, structural genomics, | 96.88 | |
| 2yc2_A | 139 | IFT25, intraflagellar transport protein 25; transp | 96.86 | |
| 3r6n_A | 450 | Desmoplakin; spectrin repeat, SH3 domain, cell adh | 96.82 | |
| 4dyl_A | 406 | Tyrosine-protein kinase FES/FPS; structural genomi | 96.82 | |
| 1f5n_A | 592 | Interferon-induced guanylate-binding protein 1; GB | 96.76 | |
| 2jda_A | 145 | Yecbm32; hypothetical protein, carbohydrate- bindi | 96.75 | |
| 3haj_A | 486 | Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, | 96.74 | |
| 2v0o_A | 276 | FCHO2, FCH domain only protein 2; lipid-binding pr | 96.73 | |
| 2x3v_A | 337 | Syndapin I, protein kinase C and casein kinase sub | 96.62 | |
| 3ghg_A | 562 | Fibrinogen alpha chain; triple-stranded coiled coi | 96.58 | |
| 2b5u_A | 551 | Colicin E3; high resolution colicin E3, ribosome i | 96.54 | |
| 4a41_A | 161 | GH89_CBM32-5, alpha-N-acetylglucosaminidase family | 96.5 | |
| 3f2z_A | 159 | Uncharacterized protein BF3579; the present C-term | 96.48 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 96.42 | |
| 3ghg_A | 562 | Fibrinogen alpha chain; triple-stranded coiled coi | 96.39 | |
| 3r6n_A | 450 | Desmoplakin; spectrin repeat, SH3 domain, cell adh | 96.36 | |
| 3edv_A | 323 | Spectrin beta chain, brain 1; spectrin repeat, coi | 96.31 | |
| 2b5u_A | 551 | Colicin E3; high resolution colicin E3, ribosome i | 96.22 | |
| 3hnm_A | 172 | Putative chitobiase; PSI-2, protein structure init | 96.21 | |
| 3lei_A | 153 | Platelet aggregation factor SM-HPAF; lectin domain | 96.17 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 96.11 | |
| 4a42_A | 149 | GH89_CBM32-4, alpha-N-acetylglucosaminidase family | 96.1 | |
| 2xzr_A | 114 | Immunoglobulin-binding protein EIBD; cell adhesion | 96.05 | |
| 3ggl_A | 169 | Putative chitobiase; X-RAY, structure genomics, NE | 96.03 | |
| 2j1a_A | 150 | Hyaluronidase, CBM32; protein-carbohydrate interac | 95.98 | |
| 3abh_A | 312 | Pacsin2, protein kinase C and casein kinase substr | 95.93 | |
| 3hnw_A | 138 | Uncharacterized protein; coiled-coil, structural g | 95.78 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 95.72 | |
| 2xs1_A | 704 | Programmed cell death 6-interacting protein; prote | 95.72 | |
| 1x7a_L | 146 | Coagulation factor IX, light chain; inhibition, bl | 95.69 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 95.57 | |
| 4gwi_A | 153 | Lectinolysin, platelet aggregation factor SM-HPAF; | 95.55 | |
| 2c4f_L | 142 | Coagulation factor VII precursor; blood coagulatio | 95.5 | |
| 3aco_A | 350 | Pacsin2, protein kinase C and casein kinase substr | 95.46 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 95.44 | |
| 2i1j_A | 575 | Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, | 95.42 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 95.42 | |
| 1nfu_B | 195 | Coagulation factor XA, light chain; hydrolase; HET | 95.34 | |
| 2efl_A | 305 | Formin-binding protein 1; EFC domain, structural g | 95.32 | |
| 1ic2_A | 81 | Tropomyosin alpha chain, skeletal muscle; alpha-he | 95.3 | |
| 2x3v_A | 337 | Syndapin I, protein kinase C and casein kinase sub | 95.26 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 95.22 | |
| 2i1j_A | 575 | Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, | 95.21 | |
| 1s35_A | 214 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 95.21 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 95.2 | |
| 3ol1_A | 119 | Vimentin; structural genomics, PSI-2, protein stru | 95.17 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 95.15 | |
| 3haj_A | 486 | Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, | 95.14 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 95.1 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 94.95 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 94.95 | |
| 4dyl_A | 406 | Tyrosine-protein kinase FES/FPS; structural genomi | 94.94 | |
| 3i2w_A | 290 | Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocyt | 94.92 | |
| 3fb2_A | 218 | Spectrin alpha chain, brain spectrin; non-erythroi | 94.88 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 94.87 | |
| 2v66_B | 111 | Nuclear distribution protein NUDE-like 1; structur | 94.86 | |
| 3abh_A | 312 | Pacsin2, protein kinase C and casein kinase substr | 94.83 | |
| 1uzk_A | 162 | Fibrillin-1; glycoprotein, extra-cellular matrix, | 94.82 | |
| 4dvy_P | 876 | Cytotoxicity-associated immunodominant antigen; on | 94.81 | |
| 3edu_A | 218 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 94.74 | |
| 3tnu_A | 131 | Keratin, type I cytoskeletal 14; coiled-coil, stru | 94.74 | |
| 1m1j_B | 464 | Fibrinogen beta chain; coiled coils, disulfide rin | 94.72 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 94.66 | |
| 3u7u_G | 55 | Neuregulin 1; signaling protein, transferase-trans | 94.63 | |
| 2vh0_B | 134 | Activated factor XA light chain; serine protease, | 94.61 | |
| 2bsg_A | 487 | Fibritin; viral protein, attachment protein, bacte | 94.57 | |
| 3fb2_A | 218 | Spectrin alpha chain, brain spectrin; non-erythroi | 94.5 | |
| 1dx5_I | 118 | Thrombomodulin; serine proteinase, EGF-like domain | 94.5 | |
| 2efk_A | 301 | CDC42-interacting protein 4; EFC domain, structura | 94.49 | |
| 1u5p_A | 216 | Spectrin alpha chain, brain; alpha spectrin, two r | 94.37 | |
| 4dvy_P | 876 | Cytotoxicity-associated immunodominant antigen; on | 94.28 | |
| 2nrj_A | 346 | HBL B protein; enterotoxin, hemolysis, transmembra | 94.25 | |
| 3urf_Z | 171 | Tumor necrosis factor receptor superfamily member; | 94.24 | |
| 1cun_A | 213 | Protein (alpha spectrin); two repeats of spectrin, | 94.23 | |
| 3tnu_A | 131 | Keratin, type I cytoskeletal 14; coiled-coil, stru | 94.17 | |
| 1sg1_X | 161 | Tumor necrosis factor receptor superfamily member | 94.16 | |
| 4dvz_A | 569 | Cytotoxicity-associated immunodominant antigen; on | 94.11 | |
| 1quu_A | 250 | Human skeletal muscle alpha-actinin 2; triple-heli | 94.09 | |
| 1m1j_A | 491 | Fibrinogen alpha subunit; coiled coils, disulfide | 94.06 | |
| 1m1j_A | 491 | Fibrinogen alpha subunit; coiled coils, disulfide | 94.04 | |
| 3urf_Z | 171 | Tumor necrosis factor receptor superfamily member; | 93.95 | |
| 3mq9_A | 471 | Bone marrow stromal antigen 2 fused to maltose-BI | 93.94 | |
| 1n7d_A | 699 | LDL receptor, low-density lipoprotein receptor; fa | 93.88 | |
| 1jma_B | 167 | Herpesvirus entry mediator; V-type IG molecule and | 93.88 | |
| 3tnu_B | 129 | Keratin, type II cytoskeletal 5; coiled-coil, stru | 93.88 | |
| 3mq7_A | 121 | Bone marrow stromal antigen 2; HIV, antiviral prot | 93.77 | |
| 1u5p_A | 216 | Spectrin alpha chain, brain; alpha spectrin, two r | 93.75 | |
| 3me4_A | 216 | Tumor necrosis factor receptor superfamily member; | 93.72 | |
| 3plt_A | 234 | Sphingolipid long chain base-responsive protein L; | 93.69 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 93.67 | |
| 2ddu_A | 387 | Reelin; beta-jelly-roll, signaling protein; 2.05A | 93.66 | |
| 3m3w_A | 320 | Pacsin3, protein kinase C and casein kinase II sub | 93.63 | |
| 3mq7_A | 121 | Bone marrow stromal antigen 2; HIV, antiviral prot | 93.59 | |
| 2w86_A | 147 | Fibrillin-1, fibrillin1; phosphoprotein, EGF-like | 93.56 | |
| 1s35_A | 214 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 93.5 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 93.45 | |
| 1mox_A | 501 | Epidermal growth factor receptor; EGFR, receptor, | 93.42 | |
| 3k51_B | 176 | Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, | 93.39 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 93.31 | |
| 1aut_L | 114 | Activated protein C; serine proteinase, plasma cal | 93.19 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 93.18 | |
| 3aco_A | 350 | Pacsin2, protein kinase C and casein kinase substr | 93.14 | |
| 2jee_A | 81 | YIIU; FTSZ, septum, coiled-coil, cell division, ce | 93.14 | |
| 2q12_A | 265 | DIP13 alpha, DCC-interacting protein 13 alpha; APP | 93.12 | |
| 1k12_A | 158 | Lectin; beta barrel, protein carbohydrate complex, | 93.1 | |
| 3l4q_C | 170 | Phosphatidylinositol 3-kinase regulatory subunit b | 93.08 | |
| 2q12_A | 265 | DIP13 alpha, DCC-interacting protein 13 alpha; APP | 93.0 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 92.88 | |
| 3me4_A | 216 | Tumor necrosis factor receptor superfamily member; | 92.77 | |
| 3h5c_B | 317 | Vitamin K-dependent protein Z; protein Z-protein Z | 92.73 | |
| 1cun_A | 213 | Protein (alpha spectrin); two repeats of spectrin, | 92.67 | |
| 2a01_A | 243 | Apolipoprotein A-I; four-helix bundle, lipid trans | 92.67 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 92.59 | |
| 3swk_A | 86 | Vimentin; cytoskeleton, intermediate filament, alp | 92.58 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 92.57 | |
| 3q8t_A | 96 | Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90 | 92.57 | |
| 2a01_A | 243 | Apolipoprotein A-I; four-helix bundle, lipid trans | 92.56 | |
| 2jee_A | 81 | YIIU; FTSZ, septum, coiled-coil, cell division, ce | 92.38 | |
| 1emn_A | 82 | Fibrillin; extracellular matrix, calcium-binding, | 92.35 | |
| 1f5n_A | 592 | Interferon-induced guanylate-binding protein 1; GB | 92.32 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 92.31 | |
| 2v4h_A | 110 | NF-kappa-B essential modulator; transcription, met | 92.24 | |
| 2fic_A | 251 | Bridging integrator 1; BAR domain, homodimer, coil | 92.22 | |
| 2no2_A | 107 | HIP-I, huntingtin-interacting protein 1; clathrin | 92.17 | |
| 2v4h_A | 110 | NF-kappa-B essential modulator; transcription, met | 92.14 | |
| 3swk_A | 86 | Vimentin; cytoskeleton, intermediate filament, alp | 92.07 | |
| 3a7p_A | 152 | Autophagy protein 16; coiled-coil, coiled coil, cy | 91.98 | |
| 3cve_A | 72 | Homer protein homolog 1; coiled coil, alternative | 91.94 | |
| 2j1v_A | 151 | Fucolectin-related protein; carbohydrate-binding p | 91.94 | |
| 2ap3_A | 199 | Conserved hypothetical protein; structural genomic | 91.92 | |
| 3edu_A | 218 | Beta-I spectrin, spectrin beta chain, erythrocyte; | 91.9 | |
| 3qd6_R | 177 | CD40L receptor, tumor necrosis factor receptor sup | 91.89 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 91.85 | |
| 3cqo_A | 293 | FBP32; F-lectin, fucolectin, sugar binding protein | 91.75 | |
| 4dvz_A | 569 | Cytotoxicity-associated immunodominant antigen; on | 91.66 | |
| 1sg1_X | 161 | Tumor necrosis factor receptor superfamily member | 91.61 | |
| 3tul_A | 158 | Cell invasion protein SIPB; translocator, type thr | 91.58 | |
| 3q8t_A | 96 | Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90 | 91.52 | |
| 3tul_A | 158 | Cell invasion protein SIPB; translocator, type thr | 91.5 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 91.39 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 91.36 | |
| 3k51_B | 176 | Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, | 91.31 | |
| 2hey_R | 146 | Tumor necrosis factor receptor superfamily member; | 91.28 | |
| 3cvf_A | 79 | Homer-3, homer protein homolog 3; coiled coil, alt | 91.24 | |
| 1edm_B | 39 | Factor IX; epidermal growth factor, EGF, calcium- | 91.05 | |
| 2q13_A | 385 | DCC-interacting protein 13 alpha; APPL1, BAR domai | 91.02 | |
| 3l4q_C | 170 | Phosphatidylinositol 3-kinase regulatory subunit b | 90.99 | |
| 3qwe_A | 279 | GMIP, GEM-interacting protein; structural genomics | 90.95 | |
| 3bn6_A | 158 | Lactadherin; anticoagulation, anti-coagulation, an | 90.89 | |
| 1m1j_C | 409 | Fibrinogen gamma chain; coiled coils, disulfide ri | 90.85 | |
| 2v72_A | 143 | CBM32, EXO-alpha-sialidase; galactose, bacterial p | 90.82 | |
| 3i00_A | 120 | HIP-I, huntingtin-interacting protein 1; transcrip | 90.76 | |
| 2avr_X | 119 | Adhesion A; antiparallel helix-loop-helix, leucine | 90.72 | |
| 3u3p_A | 313 | Tumor necrosis factor receptor superfamily member; | 90.68 | |
| 1hae_A | 63 | Heregulin-alpha; growth factor; NMR {Homo sapiens} | 90.61 | |
| 2w2n_E | 107 | LDL receptor, low-density lipoprotein receptor; hy | 90.59 | |
| 2odv_A | 235 | Plectin 1, HD1; plakin domain, spectrin repeat, cy | 90.57 | |
| 3ghg_B | 461 | Fibrinogen beta chain; triple-stranded coiled coil | 90.56 | |
| 3cqo_A | 293 | FBP32; F-lectin, fucolectin, sugar binding protein | 90.53 | |
| 1nql_B | 53 | Epidermal growth factor; cell surface receptor, ty | 90.5 | |
| 4h22_A | 103 | Leucine-rich repeat flightless-interacting protei; | 90.38 | |
| 1ext_A | 162 | Tumor necrosis factor receptor; binding protein, c | 90.27 | |
| 3u0c_A | 201 | Invasin IPAB, 62 kDa antigen; translocator, type t | 90.23 | |
| 2v5d_A | 737 | O-GLCNACASE NAGJ; family 32 carbohydrate binding m | 90.13 | |
| 4fla_A | 152 | Regulation of nuclear PRE-mRNA domain-containing 1 | 90.02 | |
| 3uun_A | 119 | Dystrophin; triple helical, cell structure and sta | 89.92 | |
| 2hey_R | 146 | Tumor necrosis factor receptor superfamily member; | 89.86 | |
| 1m1j_C | 409 | Fibrinogen gamma chain; coiled coils, disulfide ri | 89.72 | |
| 3ltf_D | 58 | Protein spitz; receptor-ligand complex ectodomain | 89.68 | |
| 2qih_A | 157 | Protein USPA1; trimeric, parallel alpha-helical co | 89.65 | |
| 3u3p_A | 313 | Tumor necrosis factor receptor superfamily member; | 89.61 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 89.58 | |
| 3ca7_A | 52 | Protein spitz; argos, EGF, developmental protein, | 89.55 | |
| 3alq_R | 173 | Tumor necrosis factor receptor superfamily member; | 89.55 | |
| 2avr_X | 119 | Adhesion A; antiparallel helix-loop-helix, leucine | 89.27 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 89.02 | |
| 2k2s_B | 61 | Micronemal protein 6; microneme protein complex, c | 88.65 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 88.49 | |
| 1fio_A | 196 | SSO1 protein; four helix bundle, alpha helix, memb | 88.22 | |
| 1czt_A | 160 | Protein (coagulation factor V); membrane-binding, | 88.19 | |
| 1a3p_A | 45 | Epidermal growth factor; disulfide connectivities, | 87.9 | |
| 1jma_B | 167 | Herpesvirus entry mediator; V-type IG molecule and | 87.79 | |
| 2j22_A | 148 | Fucolectin-related protein; carbohydrate-binding p | 87.68 | |
| 3ghg_C | 411 | Fibrinogen gamma chain; triple-stranded coiled coi | 87.64 | |
| 1z6c_A | 87 | Vitamin K-dependent protein S; EGF module, blood c | 87.49 | |
| 3cl3_D | 130 | NF-kappa-B essential modulator; death effector dom | 87.18 | |
| 1dn1_B | 267 | Syntaxin 1A, syntaxin binding protein 1; protein-p | 87.12 | |
| 3p5b_L | 400 | Low density lipoprotein receptor variant; B-propel | 87.0 | |
| 1lmj_A | 86 | Fibrillin 1; EGF, calcium, microfibril, neonatal, | 86.92 | |
| 3uul_A | 118 | Utrophin; spectrin repeat, structural protein, cyt | 86.68 | |
| 1uru_A | 244 | Amphiphysin; endocytosis, coiled-coil, membrane cu | 86.52 | |
| 2w1s_A | 192 | Hyaluronoglucosaminidase; hexosaminidase, family 3 | 86.09 | |
| 3cl3_D | 130 | NF-kappa-B essential modulator; death effector dom | 85.88 | |
| 4deq_A | 218 | Neuropilin-1, vascular endothelial growth factor; | 85.86 | |
| 3nmd_A | 72 | CGMP dependent protein kinase; leucine zipper, coi | 85.67 | |
| 1fxk_A | 107 | Prefoldin; archaeal protein, chaperone; 2.30A {Met | 85.39 | |
| 3qd6_R | 177 | CD40L receptor, tumor necrosis factor receptor sup | 85.27 | |
| 1skz_A | 119 | Antistasin; factor XA inhibitor, serine protease i | 85.21 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 85.05 | |
| 2l7b_A | 307 | Apolipoprotein E, APO-E; lipid transport, atherosc | 84.97 | |
| 2uwi_A | 142 | CRME protein; receptor, poxvirus TNF receptor, rec | 84.85 | |
| 2wuh_A | 178 | Discoidin domain receptor 2; receptor-peptide comp | 84.77 | |
| 1mox_A | 501 | Epidermal growth factor receptor; EGFR, receptor, | 84.76 | |
| 1bf5_A | 575 | Signal transducer and activator of transcription 1 | 84.58 | |
| 3pe0_A | 283 | Plectin; cytoskeleton, plakin, spectrin repeat, SH | 84.49 | |
| 3m3w_A | 320 | Pacsin3, protein kinase C and casein kinase II sub | 84.48 | |
| 1jhj_A | 171 | APC10; beta sandwich, jellyroll, cell cycle; 1.60A | 84.44 | |
| 2e26_A | 725 | Reelin, reeler protein; signaling protein; HET: NA | 84.36 | |
| 1egf_A | 53 | Epidermal growth factor; NMR {Mus musculus} SCOP: | 84.13 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 84.0 | |
| 1jcd_A | 52 | Major outer membrane lipoprotein; protein folding, | 83.4 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 83.39 | |
| 3uux_B | 242 | Mitochondrial division protein 1; tetratricopeptid | 83.24 | |
| 2bsg_A | 487 | Fibritin; viral protein, attachment protein, bacte | 82.91 | |
| 1bf5_A | 575 | Signal transducer and activator of transcription 1 | 82.79 | |
| 2fd6_A | 122 | Urokinase-type plasminogen activator; UPAR, ATF, A | 82.72 | |
| 1skz_A | 119 | Antistasin; factor XA inhibitor, serine protease i | 82.41 | |
| 1wt6_A | 81 | Myotonin-protein kinase; coiled-coil, kinase activ | 82.39 | |
| 2d1l_A | 253 | Metastasis suppressor protein 1; IRSP53, actin bin | 82.35 | |
| 2qqj_A | 325 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 82.31 | |
| 4e40_A | 252 | Putative uncharacterized protein; haptoglobin-hemo | 82.19 | |
| 3uul_A | 118 | Utrophin; spectrin repeat, structural protein, cyt | 82.11 | |
| 3cvf_A | 79 | Homer-3, homer protein homolog 3; coiled coil, alt | 82.0 | |
| 3tje_F | 156 | Tumor necrosis factor receptor superfamily member; | 81.96 | |
| 3pe0_A | 283 | Plectin; cytoskeleton, plakin, spectrin repeat, SH | 81.77 | |
| 2qqi_A | 318 | Neuropilin-1; VEGF receptor, semaphorin receptor, | 81.76 | |
| 3iox_A | 497 | AGI/II, PA; alpha helix, PPII helix, supersandwich | 81.44 | |
| 1k36_A | 46 | Epiregulin; EGF-like fold, hormone/growth factor c | 81.42 | |
| 4h8s_A | 407 | DCC-interacting protein 13-beta; BAR domain, pleck | 81.42 | |
| 3iox_A | 497 | AGI/II, PA; alpha helix, PPII helix, supersandwich | 81.17 | |
| 1iox_A | 50 | Betacellulin; EGF-like fold, hormone/growth factor | 81.07 | |
| 1uru_A | 244 | Amphiphysin; endocytosis, coiled-coil, membrane cu | 80.65 | |
| 3hhm_B | 373 | NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidil | 80.25 | |
| 3alq_R | 173 | Tumor necrosis factor receptor superfamily member; | 80.17 | |
| 1wt6_A | 81 | Myotonin-protein kinase; coiled-coil, kinase activ | 80.15 |
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-105 Score=1029.22 Aligned_cols=514 Identities=57% Similarity=1.171 Sum_probs=414.6
Q ss_pred ccCCCCCCCCCCccccCCccccccCCCCceeecccCCCCCCccceeecccCCCccccccCCCCCCCCCCCCCCCcccccc
Q psy2547 26 CQLPQPISSCERKSCYPATGNLLIGRENKLRASSTCGLHGNSTFCIVSFLEDKKKCFTCNSSPRFDNNPAFSHKIHNIVY 105 (1807)
Q Consensus 26 ~~~~~~~~~c~~~~c~p~~~~~~~~~~~~~~a~~tcg~~~~~~~c~~~~~~~~~~c~~c~~~~~~~~~~~~~h~~~~~~~ 105 (1807)
++.|...++|+.++|||+|+|||+||.++|+||||||+++||+||+++|+.+.++|++||++.|+ +.++||+++|+|
T Consensus 4 ~~~~~~~~~~~~~~c~p~~~n~~~~~~~~~~~~~tCG~~~~e~~c~~~~~~~~~~c~~Cd~~~p~---~~~~hp~~~~~~ 80 (525)
T 4aqs_A 4 AQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQEDKKCFICDSRDPY---HETLNPDSHLIE 80 (525)
T ss_dssp --------CGGGSCBCCCCEESSTTCGGGEECSCCTTSSSCEEEEEECSSSSCEEEEEECCSSCC---BTTTBTTCCCGG
T ss_pred ccCCccccCCCCCCcCCCchhhhcCCCCcEEEecCCCCCCCcceeccCCCCCCCcCCcCcCCCCc---ccccCChhhccc
Confidence 56667778999999999999999999999999999999999999999999888999999999654 234677776665
Q ss_pred ----ccCCCCCCccccccCCCCcceeEEEeccceeEEEEEEEEEcCCCCCcEEEEEecCCCCCccchhhhHhhhhhhCCC
Q psy2547 106 ----ATVPRTKTISWWQSENGVENVTIQLDMEAEFHFTHLIIYFKTFRPAAMLIERSHDFGKTWQVYRYFAADCAKSFPG 181 (1807)
Q Consensus 106 ----~~~~~~~~~~wwqs~~~~~~v~i~l~l~~~f~~~~~~~~f~s~rP~~~~iers~d~g~~w~~~qy~a~~C~~~f~~ 181 (1807)
++.+. +..|||||+++.++|||||||+++||||||||+|+||||++||||||+|||+||+||||||+||+++|++
T Consensus 81 ~~~~~~~~~-~~~~wwqs~~~~~~v~itl~l~~~~~~~~v~~~f~s~rP~~~~ieks~d~g~tw~p~qy~a~~C~~~f~~ 159 (525)
T 4aqs_A 81 NVVTTFAPN-RLKIWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKAWGVYRYFAYDCESSFPG 159 (525)
T ss_dssp GSSCC------CCCCEECCTTCCCCEEEEEEEEEEEEEEEEEEESSCCCSEEEEEEESSTTSSCEEEEEEESSTTTTSSS
T ss_pred cccccccCC-CCcccccCCCCCcCeEEEEcCCCeEEEEEEEEEEECCCCCeEEEEEecCCCCCCcceeeehhhhhhhcCC
Confidence 34332 6789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcccccccCCCCCCCCCCEEEEEeCCCCCCCCCCCCCcHhhhcceeeeeeeeeecccccCCCccccccccc
Q psy2547 182 IPRDGLRKLTDVYCESRYSSNNPSSGGEVILRVLPPSLHHSNIDPYSSDVQNLIKMTNLRINFTKLHTLGDDLLDTRRQI 261 (1807)
Q Consensus 182 ~~~~~~~~~~~~~c~~~~s~~~p~~~g~v~~~~~~~~~~~~~~~~~s~~l~~~~~~t~~ri~~~~~~t~~~~~~~~~~~~ 261 (1807)
++..++.++++||||++||++.|+++|+|+|++|++++.+. ++||++||+|++||||||+|+|++|+++++|+.++.+
T Consensus 160 ~~~~~~~~~~~v~Ct~~~s~~~p~~~g~v~~~~~~~~~~~~--~~~s~~l~~~~~~t~iri~~~~~~~~~~~~~~~~~~~ 237 (525)
T 4aqs_A 160 ISTGPMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIE--DPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRMEI 237 (525)
T ss_dssp SCCSCCSSTTCCCEECTTCCSCSTTTCEEEEESSCSSSCCS--CTTSHHHHHHHEEEEEEEEEEECCCTTCCCTTCCHHH
T ss_pred CCCCCCCCCCcceecccCCCCCCCCCCeEEEEecCCCcccC--CCCChhhhhhhhhhhhhhheecccccccccccccccc
Confidence 99989999999999999999999999999999999988887 8899999999999999999999999999999988889
Q ss_pred cceeeEEeeceeeeeccccccCccccccCCCCCC-CCCCccccccCCCCCCCCCCcccccccCCCCCCCCCCCCCCCCcC
Q psy2547 262 QEKYYYAITQMIVRGSCSCYGHASRCLPISEADT-KPDMVHGRCECTHNTQGLNCEKCIDFYNDLPWKPAFGSQTNACKQ 340 (1807)
Q Consensus 262 ~~~~~yai~~~~v~g~C~C~gha~~C~~~~~~~~-~~~~~~~~C~C~hnt~G~~Ce~C~~~~~~~p~~~~~~~~~~~C~~ 340 (1807)
+++|||||+||.|+|||+|||||++|.+.++... ..++++++|.|+|||.|.+||+|.|+|++.||.+++....+.|..
T Consensus 238 ~~~~~Yai~di~v~grC~CnGHa~~C~p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce~C~~g~~~~p~~~~~c~~~~~~~~ 317 (525)
T 4aqs_A 238 REKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKK 317 (525)
T ss_dssp HTTCCCEEEEEEEEEECCCTTBCSCEECC------CCSCCCCEECCCTTEESSSSCEECTTCCSSCCCCCBTTBCCCCCC
T ss_pred cccccEEEEeeEECeEeccCCccccCCCcCCcccCCCCCcCccccCcCCCcCCCCcCCCCccCCCccCCCcccCCCcccc
Confidence 9999999999999999999999999998776533 456788999999999999999999999999999998888899999
Q ss_pred CCCCCCCCCcccchhhhccCCCccccccCCCCCCCCCCCccccccCCcCCCCCCCCCCCCcccccCCCCCCCCCCccCCC
Q psy2547 341 CNCNNHSTKCHFDEAVYNSTGRISGGVCDSCEHNTEGRNCERCKQYFYKDPNKEFSDPEVCLRCDCDPGGSLDDGICDPY 420 (1807)
Q Consensus 341 C~Cn~ha~~C~~d~~~~~~~g~~~gg~C~~C~~nt~G~~C~~C~~g~~~~~~~~~~~~~~C~~C~C~~~gs~~~~~C~~~ 420 (1807)
|+|++|+..|.++..++...+...||+|.+|.+||.|.+|+.|.++||+++......+..|.+|.|++.+......|+..
T Consensus 318 C~C~~~~~~C~~d~~~c~~~~~~~gg~C~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~ 397 (525)
T 4aqs_A 318 CNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGY 397 (525)
T ss_dssp CCCTTSCSEEEECHHHHHHTTSSCCEEEESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCS
T ss_pred cccCCCCCCCCCCcccccccCccCCCcccCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCC
Confidence 99999999999999998888888899999999999999999999999999988888889999999999887766667654
Q ss_pred CCCC--cCCcccccCCCCCCCCCCcCCCCcccCCCCCCCCcccCCCCCCCCcC-CCCCCCCCCCcccCCCcCCCCcCccc
Q psy2547 421 TDDV--LVSGKCHCKPNVGGRRCDMCKDGFWNFNETNPNGCEPCTCNIQGTIN-SQGCNKDTGDCTCKRNVEGRDCNQCL 497 (1807)
Q Consensus 421 ~~~~--~~~G~C~Ck~~~~G~~Cd~C~~g~~~~~~~~~~gC~~C~C~~~Gs~~-~~~Cd~~~G~C~Ck~~v~G~~Cd~C~ 497 (1807)
.+.. ...+.|.|++++.|.+|++|++||||++..++.+|.+|.|+..|+.. +..||+.+|+|.|+++|+|.+|++|+
T Consensus 398 ~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~ 477 (525)
T 4aqs_A 398 TDFSVGLIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCL 477 (525)
T ss_dssp CBGGGTBCSSCCCBCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC--
T ss_pred CCCCcCCCCCccCCCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCC
Confidence 3222 34688999999999999999999999988888899999999999975 34599999999999999999999999
Q ss_pred CCccccCCcCCCCcccCCCCCCCCCCCCCcccCCcccccCCCCCCCCCC
Q psy2547 498 PHFWGLSESEEYGCKPCDCDPGASYDNNCDVISGQCKCKPHASGRTCST 546 (1807)
Q Consensus 498 ~G~~~l~~~~~~GC~~C~C~~~g~~~~~C~~~tGqC~Cr~~~~G~~C~~ 546 (1807)
+|||++..+ ..+|.+|.|+++|+....|+..+|+|.|+++|+|++|++
T Consensus 478 ~G~~g~~~~-~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 478 PQHWGLSND-LDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp -------------------------------------------------
T ss_pred CCccCCCCC-CCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 999999754 489999999999999999999999999999999999975
|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} | Back alignment and structure |
|---|
| >1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B* | Back alignment and structure |
|---|
| >2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus} | Back alignment and structure |
|---|
| >4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus} | Back alignment and structure |
|---|
| >3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens} | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* | Back alignment and structure |
|---|
| >2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens} | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
| >2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A* | Back alignment and structure |
|---|
| >4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
| >4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A* | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B* | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3zx6_A HAMP, methyl-accepting chemotaxis protein I; signaling, HAMP domain, TSR receptor, fusion; 2.65A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
| >1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} | Back alignment and structure |
|---|
| >4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A* | Back alignment and structure |
|---|
| >1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1 | Back alignment and structure |
|---|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 | Back alignment and structure |
|---|
| >1cii_A Colicin IA; bacteriocin, ION channel formation, transmembrane protein; 3.00A {Escherichia coli} SCOP: f.1.1.1 h.4.3.1 | Back alignment and structure |
|---|
| >4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans} | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* | Back alignment and structure |
|---|
| >1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A | Back alignment and structure |
|---|
| >3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A | Back alignment and structure |
|---|
| >4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340} | Back alignment and structure |
|---|
| >3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C | Back alignment and structure |
|---|
| >1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 | Back alignment and structure |
|---|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
| >3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A | Back alignment and structure |
|---|
| >3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4 | Back alignment and structure |
|---|
| >1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340} | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >3g67_A Methyl-accepting chemotaxis protein; four-helix bundle, signaling protein; 2.17A {Thermotoga maritima} PDB: 3g6b_A 3ur1_C | Back alignment and structure |
|---|
| >2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4 | Back alignment and structure |
|---|
| >2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1 | Back alignment and structure |
|---|
| >2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A | Back alignment and structure |
|---|
| >2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A | Back alignment and structure |
|---|
| >1qu7_A Methyl-accepting chemotaxis protein I; serine, four helical-bundle, signaling protein; 2.60A {Escherichia coli} SCOP: h.4.5.1 | Back alignment and structure |
|---|
| >1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A | Back alignment and structure |
|---|
| >2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A | Back alignment and structure |
|---|
| >3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
| >4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens} | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* | Back alignment and structure |
|---|
| >2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A | Back alignment and structure |
|---|
| >3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} | Back alignment and structure |
|---|
| >2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A | Back alignment and structure |
|---|
| >3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* | Back alignment and structure |
|---|
| >2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y* | Back alignment and structure |
|---|
| >4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A* | Back alignment and structure |
|---|
| >3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G* | Back alignment and structure |
|---|
| >3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
| >3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y* | Back alignment and structure |
|---|
| >3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A* | Back alignment and structure |
|---|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens} | Back alignment and structure |
|---|
| >2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd} | Back alignment and structure |
|---|
| >3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A* | Back alignment and structure |
|---|
| >3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A | Back alignment and structure |
|---|
| >3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens} | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A | Back alignment and structure |
|---|
| >1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L* | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A* | Back alignment and structure |
|---|
| >2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ... | Back alignment and structure |
|---|
| >3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L* | Back alignment and structure |
|---|
| >2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4 | Back alignment and structure |
|---|
| >1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1 | Back alignment and structure |
|---|
| >2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A | Back alignment and structure |
|---|
| >1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens} | Back alignment and structure |
|---|
| >3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A | Back alignment and structure |
|---|
| >1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A | Back alignment and structure |
|---|
| >4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} PDB: 4g0h_A | Back alignment and structure |
|---|
| >3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A | Back alignment and structure |
|---|
| >3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B* | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens} | Back alignment and structure |
|---|
| >2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ... | Back alignment and structure |
|---|
| >3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A | Back alignment and structure |
|---|
| >2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4 | Back alignment and structure |
|---|
| >1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >4dvy_P Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.30A {Helicobacter pylori} PDB: 4g0h_A | Back alignment and structure |
|---|
| >2nrj_A HBL B protein; enterotoxin, hemolysis, transmembrane, structural genomics, PSI-2, protein structure initiative; 2.03A {Bacillus cereus} SCOP: h.4.4.2 | Back alignment and structure |
|---|
| >3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R | Back alignment and structure |
|---|
| >1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A | Back alignment and structure |
|---|
| >3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X | Back alignment and structure |
|---|
| >4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A | Back alignment and structure |
|---|
| >1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A | Back alignment and structure |
|---|
| >3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R | Back alignment and structure |
|---|
| >3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli} | Back alignment and structure |
|---|
| >1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A | Back alignment and structure |
|---|
| >1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B* | Back alignment and structure |
|---|
| >3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A | Back alignment and structure |
|---|
| >1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B | Back alignment and structure |
|---|
| >3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus} | Back alignment and structure |
|---|
| >3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A | Back alignment and structure |
|---|
| >3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A | Back alignment and structure |
|---|
| >2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
| >1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 | Back alignment and structure |
|---|
| >3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L* | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli} | Back alignment and structure |
|---|
| >2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A | Back alignment and structure |
|---|
| >1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15 | Back alignment and structure |
|---|
| >3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B | Back alignment and structure |
|---|
| >2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A | Back alignment and structure |
|---|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
| >3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B | Back alignment and structure |
|---|
| >3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens} | Back alignment and structure |
|---|
| >1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A | Back alignment and structure |
|---|
| >2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0* | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0* | Back alignment and structure |
|---|
| >2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli} | Back alignment and structure |
|---|
| >1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* | Back alignment and structure |
|---|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
| >2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus} | Back alignment and structure |
|---|
| >2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A | Back alignment and structure |
|---|
| >2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus} | Back alignment and structure |
|---|
| >3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A* | Back alignment and structure |
|---|
| >2ap3_A Conserved hypothetical protein; structural genomics, tetra helix, PSI, protein structure INI midwest center for structural genomics; 1.60A {Staphylococcus aureus subsp} SCOP: a.24.27.1 | Back alignment and structure |
|---|
| >3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A | Back alignment and structure |
|---|
| >3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} | Back alignment and structure |
|---|
| >4dvz_A Cytotoxicity-associated immunodominant antigen; oncoprotein; 3.19A {Helicobacter pylori} | Back alignment and structure |
|---|
| >1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X | Back alignment and structure |
|---|
| >3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp} | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
| >3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D | Back alignment and structure |
|---|
| >2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R | Back alignment and structure |
|---|
| >3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A | Back alignment and structure |
|---|
| >2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A | Back alignment and structure |
|---|
| >3l4q_C Phosphatidylinositol 3-kinase regulatory subunit beta; PI3K, phosphoinositide-3-kinase, influenza virus, NS1; 2.30A {Bos taurus} PDB: 2v1y_B | Back alignment and structure |
|---|
| >3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A | Back alignment and structure |
|---|
| >1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C | Back alignment and structure |
|---|
| >2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens} | Back alignment and structure |
|---|
| >3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A | Back alignment and structure |
|---|
| >3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A | Back alignment and structure |
|---|
| >1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A | Back alignment and structure |
|---|
| >2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A | Back alignment and structure |
|---|
| >2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A | Back alignment and structure |
|---|
| >3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H* | Back alignment and structure |
|---|
| >3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} | Back alignment and structure |
|---|
| >1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C* | Back alignment and structure |
|---|
| >4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
| >1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R | Back alignment and structure |
|---|
| >3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P | Back alignment and structure |
|---|
| >2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} | Back alignment and structure |
|---|
| >4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
| >3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R | Back alignment and structure |
|---|
| >1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C | Back alignment and structure |
|---|
| >3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2qih_A Protein USPA1; trimeric, parallel alpha-helical coiled-coil, cell adhesion; 1.90A {Moraxella catarrhalis} | Back alignment and structure |
|---|
| >3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A | Back alignment and structure |
|---|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
| >3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D | Back alignment and structure |
|---|
| >3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1 | Back alignment and structure |
|---|
| >1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A | Back alignment and structure |
|---|
| >1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1 | Back alignment and structure |
|---|
| >1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B* | Back alignment and structure |
|---|
| >2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C | Back alignment and structure |
|---|
| >1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1dn1_B Syntaxin 1A, syntaxin binding protein 1; protein-protein complex, multi-subunit; 2.60A {Rattus norvegicus} PDB: 3c98_B | Back alignment and structure |
|---|
| >3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L | Back alignment and structure |
|---|
| >1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 | Back alignment and structure |
|---|
| >3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A | Back alignment and structure |
|---|
| >1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1 | Back alignment and structure |
|---|
| >2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A* | Back alignment and structure |
|---|
| >3cl3_D NF-kappa-B essential modulator; death effector domain, coiled-coil, coiled coil, cytoplasm, disease mutation, ectodermal dysplasia; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A | Back alignment and structure |
|---|
| >3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens} | Back alignment and structure |
|---|
| >1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B | Back alignment and structure |
|---|
| >3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 | Back alignment and structure |
|---|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
| >2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2uwi_A CRME protein; receptor, poxvirus TNF receptor, receptor immunomodulator, TNF alpha receptor; 2.0A {Vaccinia virus} | Back alignment and structure |
|---|
| >2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A | Back alignment and structure |
|---|
| >1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 | Back alignment and structure |
|---|
| >1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 | Back alignment and structure |
|---|
| >3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
| >3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A | Back alignment and structure |
|---|
| >1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9 | Back alignment and structure |
|---|
| >2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A* | Back alignment and structure |
|---|
| >1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A | Back alignment and structure |
|---|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
| >3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C} | Back alignment and structure |
|---|
| >1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 | Back alignment and structure |
|---|
| >2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A | Back alignment and structure |
|---|
| >1skz_A Antistasin; factor XA inhibitor, serine protease inhibitor, thrombosis; 1.90A {Haementeria officinalis} SCOP: g.3.15.1 g.3.15.1 | Back alignment and structure |
|---|
| >1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus} | Back alignment and structure |
|---|
| >2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >4e40_A Putative uncharacterized protein; haptoglobin-hemoglobin receptor, helical bundle, receptor, C surface, transport protein; 1.60A {Trypanosoma congolense} | Back alignment and structure |
|---|
| >3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A | Back alignment and structure |
|---|
| >3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens} | Back alignment and structure |
|---|
| >3tje_F Tumor necrosis factor receptor superfamily member; agonistic antibody, FAB fragment, antibody-receptor complex, cysteine-rich domain, FAS, immune; HET: EDO; 1.93A {Homo sapiens} PDB: 3thm_F* | Back alignment and structure |
|---|
| >3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A | Back alignment and structure |
|---|
| >3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A | Back alignment and structure |
|---|
| >1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A | Back alignment and structure |
|---|
| >4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A | Back alignment and structure |
|---|
| >1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A | Back alignment and structure |
|---|
| >1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1 | Back alignment and structure |
|---|
| >3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A | Back alignment and structure |
|---|
| >3alq_R Tumor necrosis factor receptor superfamily member; ligand-receptor complex, cytokine, cytokine-cytokine recepto; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
| >1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1807 | ||||
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 2e-11 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 3e-10 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 2e-08 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 2e-07 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 3e-07 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 7e-07 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 7e-07 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 2e-06 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 3e-06 | |
| d1kloa2 | 56 | g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (M | 6e-06 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 4e-11 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 4e-11 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 6e-11 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 7e-11 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 1e-10 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 3e-09 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 1e-06 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 2e-06 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 4e-05 | |
| d1kloa3 | 51 | g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse ( | 3e-04 | |
| d1kloa1 | 55 | g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu | 3e-09 | |
| d1kloa1 | 55 | g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu | 3e-08 | |
| d1kloa1 | 55 | g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu | 6e-08 | |
| d1kloa1 | 55 | g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mu | 0.003 | |
| d2cvca1 | 505 | a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {De | 5e-06 | |
| d2cvca1 | 505 | a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {De | 4e-04 | |
| d1eq1a_ | 166 | a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [Ta | 2e-05 | |
| d1r8ia_ | 187 | a.8.7.1 (A:) Typo IV secretion system protein TraC | 8e-05 | |
| d1fioa_ | 196 | a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces c | 0.003 | |
| d1fioa_ | 196 | a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces c | 0.004 |
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: Laminin-type module domain: Laminin gamma1 chain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.8 bits (142), Expect = 2e-11
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 976 CDCSNNTDLALPGNCDTLTGKCLQCRYDTEGDHCQVCKAGFFGNAL-EQNCTEC 1028
C C++N D GNC+ LTG+CL+C Y+T G +C CK GFFGN L +C
Sbjct: 1 CQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKC 54
|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 56 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 51 | Back information, alignment and structure |
|---|
| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55 | Back information, alignment and structure |
|---|
| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55 | Back information, alignment and structure |
|---|
| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55 | Back information, alignment and structure |
|---|
| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} Length = 55 | Back information, alignment and structure |
|---|
| >d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {Desulfovibrio vulgaris [TaxId: 881]} Length = 505 | Back information, alignment and structure |
|---|
| >d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA {Desulfovibrio vulgaris [TaxId: 881]} Length = 505 | Back information, alignment and structure |
|---|
| >d1eq1a_ a.63.1.1 (A:) Apolipophorin-III {Manduca sexta [TaxId: 7130]} Length = 166 | Back information, alignment and structure |
|---|
| >d1r8ia_ a.8.7.1 (A:) Typo IV secretion system protein TraC {Escherichia coli [TaxId: 562]} Length = 187 | Back information, alignment and structure |
|---|
| >d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 196 | Back information, alignment and structure |
|---|
| >d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 196 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1807 | |||
| d1kloa3 | 51 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 99.14 | |
| d1kloa2 | 56 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 99.03 | |
| d1kloa2 | 56 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 98.97 | |
| d1kloa3 | 51 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 98.94 | |
| d1kloa1 | 55 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 98.69 | |
| d1kloa1 | 55 | Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: | 98.58 | |
| d1tvga_ | 136 | Placental protein 25, pp25 {Human (Homo sapiens) [ | 97.57 | |
| d2efla1 | 288 | Formin-binding protein 1, FNBP1 {Human (Homo sapie | 97.35 | |
| d1jhja_ | 161 | APC10/DOC1 subunit of the anaphase-promoting compl | 97.06 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 96.66 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 96.65 | |
| d1gqpa_ | 194 | APC10/DOC1 subunit of the anaphase-promoting compl | 96.64 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 96.56 | |
| d1w8oa2 | 142 | Sialidase, C-terminal domain {Micromonospora virid | 96.51 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 96.42 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 96.41 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 96.31 | |
| d2ap3a1 | 185 | Hypothetical protein MW0975 (SA0943) {Staphylococc | 96.04 | |
| d2ap3a1 | 185 | Hypothetical protein MW0975 (SA0943) {Staphylococc | 95.95 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 95.77 | |
| d1k3ia2 | 162 | Galactose oxidase, N-terminal domain {Fungi (Fusar | 95.72 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 95.64 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 95.34 | |
| d3egfa_ | 53 | Epidermal growth factor, EGF {Mouse (Mus musculus) | 94.93 | |
| d1xkba1 | 39 | Factor X, N-terminal module {Human (Homo sapiens) | 94.82 | |
| d1edmb_ | 39 | Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606 | 94.82 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 94.72 | |
| d1f5na1 | 300 | Interferon-induced guanylate-binding protein 1 (GB | 94.71 | |
| d2vj3a2 | 39 | Neurogenic locus notch homolog protein 1, Notch1 { | 94.71 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 94.6 | |
| d1i4da_ | 200 | Arfaptin, Rac-binding fragment {Human (Homo sapien | 94.59 | |
| d1nqlb_ | 48 | Epidermal growth factor, EGF {Human (Homo sapiens) | 94.29 | |
| d2c4fl1 | 37 | Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | 93.92 | |
| d2vj3a3 | 35 | Neurogenic locus notch homolog protein 1, Notch1 { | 93.58 | |
| d1fioa_ | 196 | Sso1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 93.47 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 93.33 | |
| d2elba1 | 268 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 93.22 | |
| d1k12a_ | 158 | Fucose binding lectin {European eel (Anguilla angu | 93.12 | |
| d1g1ta2 | 39 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 92.87 | |
| d1g1sa2 | 40 | E-selectin, EGF-domain {Human (Homo sapiens) [TaxI | 92.81 | |
| d2dtge6 | 155 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 92.52 | |
| d1urua_ | 217 | Amphiphysin {Fruit fly (Drosophila melanogaster) [ | 92.38 | |
| d1tpga1 | 41 | Plasminogen activator (tissue-type), t-PA {Human ( | 91.85 | |
| d1urua_ | 217 | Amphiphysin {Fruit fly (Drosophila melanogaster) [ | 91.78 | |
| d2vj3a1 | 42 | Neurogenic locus notch homolog protein 1, Notch1 { | 91.77 | |
| d1i4da_ | 200 | Arfaptin, Rac-binding fragment {Human (Homo sapien | 90.93 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 90.89 | |
| d1fxkc_ | 133 | Prefoldin alpha subunit {Archaeon Methanobacterium | 90.68 | |
| d1autl1 | 48 | Activated protein c (autoprothrombin IIa) {Human ( | 90.58 | |
| d1m6ba3 | 145 | Receptor protein-tyrosine kinase Erbb-3 Cys-rich d | 89.44 | |
| d1k36a_ | 46 | Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI | 87.76 | |
| d2elba1 | 268 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 86.73 | |
| d1moxa3 | 149 | EGF receptor Cys-rich domains {Human (Homo sapiens | 86.45 | |
| d1gqea_ | 362 | Polypeptide chain release factor 2 (RF2) {Escheric | 84.63 | |
| d1gs9a_ | 144 | Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: | 84.37 | |
| d1xdtr_ | 41 | Heparin-binding epidermal growth factor, HBEGF {Hu | 84.06 | |
| d2dtge6 | 155 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 83.87 | |
| d2qqia1 | 156 | C2 domain of factor VIII {Human (Homo sapiens) [Ta | 82.91 | |
| d1cvua2 | 41 | Prostaglandin H2 synthase-1, EGF-like module {Mous | 82.9 | |
| d1moxc_ | 49 | Transforming growth factor alpha {Human (Homo sapi | 82.52 | |
| d1ioxa_ | 50 | Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606] | 82.29 | |
| d1m6ba3 | 145 | Receptor protein-tyrosine kinase Erbb-3 Cys-rich d | 82.19 | |
| d1ez3a_ | 124 | Syntaxin 1A N-terminal domain {Rat (Rattus norvegi | 82.0 | |
| d1q4ga2 | 42 | Prostaglandin H2 synthase-1, EGF-like module {Shee | 81.9 | |
| d1igra3 | 150 | Type 1 insulin-like growth factor receptor Cys-ric | 80.98 | |
| d1jv2b5 | 43 | Integrin beta EGF-like domains {Human (Homo sapien | 80.44 | |
| d1haea_ | 63 | Heregulin-alpha, EGF-like domain {Human (Homo sapi | 80.21 |
| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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class: Small proteins fold: Knottins (small inhibitors, toxins, lectins) superfamily: EGF/Laminin family: Laminin-type module domain: Laminin gamma1 chain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.14 E-value=7.7e-12 Score=103.26 Aligned_cols=49 Identities=43% Similarity=1.059 Sum_probs=43.0
Q ss_pred CCCCCCCCcCC-CCCCCCCCCcccCCCcCCCCcCcccCCccccCCcCCCCcc
Q psy2547 462 CTCNIQGTINS-QGCNKDTGDCTCKRNVEGRDCNQCLPHFWGLSESEEYGCK 512 (1807)
Q Consensus 462 C~C~~~Gs~~~-~~Cd~~~G~C~Ck~~v~G~~Cd~C~~G~~~l~~~~~~GC~ 512 (1807)
|+|++.||++. ..||+.||||.||++|+|++||+|++|||+|+. +.||+
T Consensus 1 C~C~~~Gs~~~~~~Cd~~tGqC~Ck~~v~G~~Cd~C~~g~~~~~~--~~gC~ 50 (51)
T d1kloa3 1 CACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCGTCDPGYYNLQS--GQGCE 50 (51)
T ss_dssp CCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCCEECTTCBCGGG--SSCCB
T ss_pred CcCCCCcccCCCCccCCCCCeecCCCCCcCCCcccccccccCCCC--CCCCC
Confidence 78999999864 359999999999999999999999999999974 34664
|
| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1tvga_ b.18.1.9 (A:) Placental protein 25, pp25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jhja_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1gqpa_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
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| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d2ap3a1 a.24.27.1 (A:12-196) Hypothetical protein MW0975 (SA0943) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
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| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
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| >d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
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| >d1f5na1 a.114.1.1 (A:284-583) Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
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| >d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]} | Back information, alignment and structure |
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| >d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1urua_ a.238.1.1 (A:) Amphiphysin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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| >d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i4da_ a.238.1.2 (A:) Arfaptin, Rac-binding fragment {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
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| >d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2elba1 a.238.1.1 (A:6-273) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gqea_ e.38.1.1 (A:) Polypeptide chain release factor 2 (RF2) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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| >d1gs9a_ a.24.1.1 (A:) Apolipoprotein E {Human (Homo sapiens), E4 [TaxId: 9606]} | Back information, alignment and structure |
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| >d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2qqia1 b.18.1.2 (A:431-586) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
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| >d1igra3 g.3.9.1 (A:150-299) Type 1 insulin-like growth factor receptor Cys-rich domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|