Psyllid ID: psy2649


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280------1290------1300------1310------1320------1330------1340------1350------1360------1370------1380------1390------1400------1410------1420------1430------1440------1450------1460------1470------1480------1490------1500------1510------1520------1530------1540------1550------1560------1570------1580------1590------1600------1610------1620------1630------164
MPENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
cccccccccccEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccEEEEccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccccccEEEEcccccccccccHHHHHHHHHHccHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccEEEEccccHHHHHHHHHHHcccEEEEEcccccccccccccccccEEEcccEEEEccEEEEcccccEEEEEccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccHHHHHHHHHcccccccccHHHHHHHcHHHHHHHHccccccccccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccHHHHHHcccccccEEEEccccccHHHHHHHHHHHccccccccccEEEcccccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHcccccccccEEEEcccccccccccccHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHccccccccccEEcccEEEcccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccccEEEEccccccHHHHHHHHHHHHHHcccccccEEEEEEEEcccccccccccccEEEEEcccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHcc
ccHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHccEEEEEEcccHHHHHHHHcccccHHHcccccHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHccHHHHHHcccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHccHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccccEEEEEcccccccccEEEEcccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHHHcccEEEEcccEEEcccccEEEEEEcccccccccEEEEEEEEEEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccccccHHHHHcccccccccccccccccHHcccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHccHHHccHHHHHHHcHHHHHHHHcccccccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHccccccccccccHHHHHHcccccccEEEEEcccccHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccEEHEHccEEEcccccccHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHHHEEEccccccccHHHHHHHHHHHHHHccHHHHcccccccccccccccccHHHHHHHHHHccccccccEccccccccHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEcHHHHHHHHHHHcccccHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHHHHccccccEEEEEEEEEcccHHHccccccccEEEEEEEEcccccccccccccccccccccccccEEEEEEcccccccccccEEcEEEEcccccccEEEEEEEcccccHHHHHHHHHHHHcc
mpeneymdkpliychfvecvgdpkymkmpdwATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRInrimeaprgnallvgvggsgkqSLSRLSAFISTLEPFQIQLkknygipdlkIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMlasgevpdlftddeIENIVNniaaepeipltadldpltmltddatiafwnneglpndrmstENATILVnsqrwplmidpqevlrKPCAVFMAYVHSSVNQISVSYLLNerrynyttpksFLEQIDLYAKLLKIkfddnksgiTRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLdknnltelkalkappqgvIAVCDAVAVLMAskkgkvpkdlgwkgsqlkalkappqglcAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGlasenvrwkdSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLlnkfwlptikkskidwfhewPQEALESVSLKFLVKSCeshrygnkltVIRLGQKRVMDQIEKAVMSGFVLLIENigesvdpvldnligrnlirkgkvvkigekeidynpnfKLILHtklanphykpemQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSssggdvlsdknLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELfkinpiyqfSLKAFTVVFHNAMTkakksdnlkGRVANLVESITFMTFqytsrglferdkLIFMAQMTIQVKSLcmgdqhyhvlqQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLlrfpfqpgvsspvdfltnTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIegetpekdklpqewkNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQsyresssttpiffilspgvdptrdveavgrkmgfttdlrnlhnvslgqgqevIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMeasfekphknyrlfisaepasdpeyhiipqgvldssikitnepptgmqANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERrkfgpqgwnrsypfnvgdlTISSLVLYNYLeannnvpwedLRYLFGeimygghitddwDRRLCRTYLEeymnpellegetklapgfpappnqdyqgyhtyideslppespilyglhpnaeigfLTTQAENVFKIIFElqprdtaaaqgsgvtreEKVRQVLDEILDkcpdafnikdmmgrvedrtPYIIVAFQECERMNILMSEIKRSLKELNLglkgeltiTTDMEALEYSIfmdtvppswekraypsmlglgGWFADLMLRLKELENwvgdfqlpssvwlagffnpqSFLTAIMQSTArknewpldkmclqcdvTKKQREdftqaprdgayvngLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDlrnmyecpvyktrqrgpnyvwtfnlktkekpakwtMAGVALLFM
mpeneymdkpliYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNniaaepeipltadLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTElkalkappqgvIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSceshrygnkltvirlgQKRVMDQIEKAVMSGFVLLIENIGEsvdpvldnligrnlirkgkvvkigekeidynpnFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLEllkanltkeqnLFKITLKGLEDDLLMRLSSsggdvlsdknlvlnlekskktakeieikvkegkktakkideareqyrpaaeRASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMtkakksdnlkgRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIegetpekdklpqewknkSALQRLCIMRCLRPDRMTYAVRSFveekmgdryVNARAIEFEqsyresssttpiffilspgvdptrDVEAVGRKMGfttdlrnlhnvSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDtaaaqgsgvtreeKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQredftqaprdgaYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECpvyktrqrgpnyvwtfnlktkekpakwtmAGVALLFM
MPENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRkalaaanaelaaasqklaelkakIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAkeieikvkegkkTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRkalaaanaelaaasqklaelkakIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSlkelnlglkgelTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
********KPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGN***KVRAIEEDVSYKQKVCAEDL****PALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRL*************V***************************************RASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIE**************NKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYR***STTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASF***HKNYRLFISA******EYHIIPQGVLDSSI****************ALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGE*************DYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPR**************KVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLF*
*PENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEP*****ADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEK**R***EDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKE**FCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAM************VANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKII**********************RQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
MPENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRD************EKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
MPENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPR***********REEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MPENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTADLDPLTMLTDDATIAFWNNEGLPNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTFVEPKRKAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDWFHEWPQEALESVSLKFLVKSCESHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRKAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxLDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLFM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1637 2.2.26 [Sep-21-2011]
P230984466 Dynein beta chain, ciliar N/A N/A 0.959 0.351 0.570 0.0
P390574466 Dynein beta chain, ciliar N/A N/A 0.959 0.351 0.568 0.0
Q69Z234481 Dynein heavy chain 17, ax yes N/A 0.967 0.353 0.545 0.0
Q9NYC94486 Dynein heavy chain 9, axo no N/A 0.965 0.352 0.547 0.0
Q9UFH24485 Dynein heavy chain 17, ax yes N/A 0.962 0.351 0.543 0.0
Q96DT54523 Dynein heavy chain 11, ax no N/A 0.961 0.347 0.498 0.0
Q395654568 Dynein beta chain, flagel N/A N/A 0.959 0.343 0.384 0.0
Q9MBF84513 Dynein-1-beta heavy chain N/A N/A 0.948 0.344 0.325 0.0
P0C6F14456 Dynein heavy chain 2, axo no N/A 0.951 0.349 0.317 0.0
Q8IVF44471 Dynein heavy chain 10, ax no N/A 0.954 0.349 0.312 0.0
>sp|P23098|DYHC_TRIGR Dynein beta chain, ciliary OS=Tripneustes gratilla PE=1 SV=1 Back     alignment and function desciption
 Score = 2038 bits (5280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1021/1791 (57%), Positives = 1261/1791 (70%), Gaps = 221/1791 (12%)

Query: 9    KPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRIN 68
            KP I+CHF   +GDPKYM++P+W  L+KIL E + +YNEI A MNLVLFEDAM H+CRIN
Sbjct: 2732 KPNIHCHFATGIGDPKYMQVPNWPELNKILVEALDTYNEINAVMNLVLFEDAMQHVCRIN 2791

Query: 69   RIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKA 128
            RI+E+PRGNALLVGVGGSGKQSL+RL+++IS+LE FQI L+K YGIPDLK+DLA++ +KA
Sbjct: 2792 RILESPRGNALLVGVGGSGKQSLARLASYISSLEVFQITLRKGYGIPDLKLDLATVCMKA 2851

Query: 129  GLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEIPLTA 188
            GLKN G +FLMTD+QV+DEKFLV+IND+LASGE+PDLF DDE+ENI+  +  E +     
Sbjct: 2852 GLKNIGTVFLMTDAQVSDEKFLVLINDLLASGEIPDLFADDEVENIIGGVRNEVK----- 2906

Query: 189  DLDPLTMLTDDATIAFWNNEGLPNDRMSTENATIL----------VNSQRWPLMID---- 234
                  M   D     W       DR+  +  T+L          V S+++P +++    
Sbjct: 2907 -----GMGLQDTRENCWK---FFIDRLRRQLKTVLCFSPVGTTLRVRSRKFPAVVNCTSI 2958

Query: 235  ------PQEVL------------------RKPCAVFMAYVHSSVNQISVSYLLNERRYNY 270
                  PQE L                  +K  A FMAYVH SVN+ S  YL NERRYNY
Sbjct: 2959 DWFHEWPQEALVSVSMRFLDEVELLKGDIKKSIAEFMAYVHVSVNESSKLYLTNERRYNY 3018

Query: 271  TTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLG------------------ 312
            TTPKSFLEQI LY  LL +K  +  + + R +NGL KL S                    
Sbjct: 3019 TTPKSFLEQIKLYESLLSMKSKELTAKMERLENGLTKLQSTAQQVDDLKAKLASQEVELA 3078

Query: 313  ----------------------------NEEKKVRAIEEDVSYKQKVCAEDLEKAEPALV 344
                                        +EEKKV  I E+VS K K C+EDL KAEPAL+
Sbjct: 3079 QKNEDADKLIQVVGVETEKVSKEKAIADDEEKKVAIINEEVSKKAKDCSEDLAKAEPALL 3138

Query: 345  AAQEALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQ----- 399
            AAQEAL+TL+KNNLTELK+  +PP  V+ V  AV VL+A   GK+PKD  WK ++     
Sbjct: 3139 AAQEALNTLNKNNLTELKSFGSPPSAVLKVAAAVMVLLAPN-GKIPKDRSWKAAKVVMNK 3197

Query: 400  --------------------LKALKA-------PPQ----------GLCAWVINIITFYN 422
                                LK++K         P+          GLC+WV+NI+ FYN
Sbjct: 3198 VDAFLDSLINYDKENIHENCLKSIKEYLNDPEFEPEYIKGKSLAAGGLCSWVVNIVKFYN 3257

Query: 423  VWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQ 482
            V+  VEPKR AL  AN EL AA  KLA +KAKIA L+A L ELT +F+ A  +KL CQ +
Sbjct: 3258 VYCDVEPKRIALQKANDELKAAQDKLALIKAKIAELDANLAELTAQFEKATSDKLKCQQE 3317

Query: 483  AEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSY 542
            AE  +  I LA+RLV GLASENVRW ++V   +    TLPGD+LL+TAFVSY+GCFT++Y
Sbjct: 3318 AEATSRTITLANRLVGGLASENVRWGEAVANFKIQEKTLPGDVLLITAFVSYIGCFTKTY 3377

Query: 543  RLDLLNKFWLPTIKKSK--------IDWFHE---------WPQEALESVSLKF----LVK 581
            R+DL  + WLP +K  K        +D             W  E L S  +      ++ 
Sbjct: 3378 RVDLQERMWLPFLKSQKDPIPITEGLDVLSMLTDDADIAVWNNEGLPSDRMSTENATILS 3437

Query: 582  SCE----------------SHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESV 625
            +C+                  +YG+ L VIR+GQ+  +D IE A+ SG  +LIEN+ ES+
Sbjct: 3438 NCQRWPLMIDPQLQGIKWIKQKYGDDLRVIRIGQRGYLDTIENAISSGDTVLIENMEESI 3497

Query: 626  DPVLDNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTV 685
            DPVLD ++GRN I+KG+ +KIG+KE++YNP+F+LIL TKLANPHYKPEMQAQTTLINFTV
Sbjct: 3498 DPVLDPVLGRNTIKKGRYIKIGDKEVEYNPDFRLILQTKLANPHYKPEMQAQTTLINFTV 3557

Query: 686  TRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSD 745
            TRDGLEDQLLA VV  ERPDLE LK++LTK+QN FKI LK LED+LL RLSS+ G+ L D
Sbjct: 3558 TRDGLEDQLLANVVAQERPDLEKLKSDLTKQQNDFKIILKELEDNLLSRLSSAEGNFLGD 3617

Query: 746  KNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINP 805
              LV NLE +K+TA EI +KV+E K T  KI+EARE YRPAA RAS++YFI+N+L KINP
Sbjct: 3618 TALVENLETTKRTAAEISVKVEEAKVTEVKINEARELYRPAAARASLLYFILNDLNKINP 3677

Query: 806  IYQFSLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQ 865
            IYQFSLKAF  VF   + +A+  +++K RV NL++ IT+  F YT+RGLFE DKLIF  Q
Sbjct: 3678 IYQFSLKAFNTVFSLPIARAEPCEDVKERVVNLIDCITYSVFIYTTRGLFEADKLIFTTQ 3737

Query: 866  MTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREE 925
            +  QV                                             +MKKEIA+ E
Sbjct: 3738 VAFQV--------------------------------------------LLMKKEIAQNE 3753

Query: 926  LDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETP 985
            LDFLLRFP Q G++SPVDFLTN+ WG +++LS +E+F+NLD+DIE +AKRWKK++E E P
Sbjct: 3754 LDFLLRFPIQVGLTSPVDFLTNSAWGAIKSLSAMEDFRNLDRDIEGSAKRWKKFVESECP 3813

Query: 986  EKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRES 1045
            EK+K PQEWKNKSALQ+LC+MR LR DRM+YAVR+F+EEK+G +YV  R +EF +SY E+
Sbjct: 3814 EKEKFPQEWKNKSALQKLCMMRALRADRMSYAVRNFIEEKLGSKYVEGRQVEFAKSYEET 3873

Query: 1046 SSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKG 1105
               TP+FFILSPGVDP +DVEA+G+K+GFT D  N HNVSLGQGQE++AE+ + +A+ +G
Sbjct: 3874 DPATPVFFILSPGVDPLKDVEALGKKLGFTFDNNNFHNVSLGQGQEIVAEQCMDLAAKEG 3933

Query: 1106 HWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIK 1165
            HW ILQN+HLV  WL TL+KK+E      H +YR+++SAEPA  PE HIIPQG+L+SSIK
Sbjct: 3934 HWVILQNIHLVAKWLSTLEKKLEQYSVGSHDSYRVYMSAEPAGSPEAHIIPQGILESSIK 3993

Query: 1166 ITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWN 1225
            ITNEPPTGM ANLHKAL NF Q+ LEMC++EAE+K ILFALCYFHAVV ER+KFGPQGWN
Sbjct: 3994 ITNEPPTGMFANLHKALYNFNQDTLEMCAREAEFKVILFALCYFHAVVCERQKFGPQGWN 4053

Query: 1226 RSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEE 1285
            RSYPFN GDLTIS  VLYNYLEAN+ VPW+DLRYLFGEIMYGGHITDDWDRRLCRTYLEE
Sbjct: 4054 RSYPFNTGDLTISVNVLYNYLEANSKVPWQDLRYLFGEIMYGGHITDDWDRRLCRTYLEE 4113

Query: 1286 YMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAE 1345
            YM PE+L+GE  LAPGFP PPN DY+GYH YIDE LPPESP LYGLHPNAEIGFLTT+++
Sbjct: 4114 YMAPEMLDGELYLAPGFPVPPNSDYKGYHQYIDEILPPESPYLYGLHPNAEIGFLTTESD 4173

Query: 1346 NVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYII 1405
            N+FKI+ ELQPRD     G G +REEK++ +LDEI++K P+ FN+ ++M +VEDRTPY++
Sbjct: 4174 NLFKIVLELQPRDAGGGGGGGSSREEKIKSLLDEIVEKLPEEFNMMEIMAKVEDRTPYVV 4233

Query: 1406 VAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPS 1465
            VAFQECERMN+L SEI+RSLKEL+LGLKGELTIT DME L  ++F+D +P +W KRAYPS
Sbjct: 4234 VAFQECERMNMLTSEIRRSLKELDLGLKGELTITPDMEDLSNALFLDQIPATWVKRAYPS 4293

Query: 1466 MLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDK 1525
            + GL  W+ADL+ R+KELE W  DF LP+ VWL GFFNPQSFLTAIMQS ARKNEWPLDK
Sbjct: 4294 LFGLTSWYADLLQRIKELEQWTADFALPNVVWLGGFFNPQSFLTAIMQSMARKNEWPLDK 4353

Query: 1526 MCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIK 1585
            MCLQCDVTKK +EDF+ APR+G+YV+GL+MEGARWD    +I+DA+LKEL P MPVI+IK
Sbjct: 4354 MCLQCDVTKKNKEDFSSAPREGSYVHGLFMEGARWDTQTNMIADARLKELAPNMPVIFIK 4413

Query: 1586 AITQDKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLF 1636
            AI  DKQD RN+YECPVYKT+QRGP +VWTFNLK+KEK AKWT+AGVALL 
Sbjct: 4414 AIPVDKQDTRNIYECPVYKTKQRGPTFVWTFNLKSKEKAAKWTLAGVALLL 4464




Force generating protein of eukaryotic cilia and flagella. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP.
Tripneustes gratilla (taxid: 7673)
>sp|P39057|DYHC_HELCR Dynein beta chain, ciliary OS=Heliocidaris crassispina PE=1 SV=1 Back     alignment and function description
>sp|Q69Z23|DYH17_MOUSE Dynein heavy chain 17, axonemal OS=Mus musculus GN=Dnah17 PE=2 SV=2 Back     alignment and function description
>sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3 Back     alignment and function description
>sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=1 SV=2 Back     alignment and function description
>sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3 Back     alignment and function description
>sp|Q39565|DYHB_CHLRE Dynein beta chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA4 PE=3 SV=1 Back     alignment and function description
>sp|Q9MBF8|DYH1B_CHLRE Dynein-1-beta heavy chain, flagellar inner arm I1 complex OS=Chlamydomonas reinhardtii GN=DHC10 PE=1 SV=1 Back     alignment and function description
>sp|P0C6F1|DYH2_MOUSE Dynein heavy chain 2, axonemal OS=Mus musculus GN=Dnah2 PE=2 SV=1 Back     alignment and function description
>sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1637
157134856 4545 dynein heavy chain [Aedes aegypti] gi|10 0.968 0.348 0.585 0.0
383866400 4460 PREDICTED: dynein beta chain, ciliary-li 0.966 0.354 0.581 0.0
328700120 3854 PREDICTED: dynein beta chain, ciliary-li 0.967 0.411 0.584 0.0
322788437 3091 hypothetical protein SINV_80910 [Solenop 0.966 0.511 0.583 0.0
307168036 4455 Dynein beta chain, ciliary [Camponotus f 0.966 0.355 0.582 0.0
170031290 4543 dynein heavy chain [Culex quinquefasciat 0.969 0.349 0.585 0.0
328707060 4331 PREDICTED: dynein heavy chain 17, axonem 0.967 0.365 0.585 0.0
157120024 4472 dynein heavy chain [Aedes aegypti] gi|10 0.966 0.353 0.579 0.0
350397082 4459 PREDICTED: dynein beta chain, ciliary-li 0.966 0.354 0.579 0.0
332027796 4463 Dynein beta chain, ciliary [Acromyrmex e 0.962 0.353 0.584 0.0
>gi|157134856|ref|XP_001656476.1| dynein heavy chain [Aedes aegypti] gi|108881336|gb|EAT45561.1| AAEL003155-PA [Aedes aegypti] Back     alignment and taxonomy information
 Score = 2091 bits (5417), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1047/1787 (58%), Positives = 1271/1787 (71%), Gaps = 201/1787 (11%)

Query: 3    ENEYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMS 62
            EN+    P+IYCHF + + DPKYM +  W +L+K L E  ++YN+++ +MNLVLFEDAMS
Sbjct: 2805 ENKVFSNPIIYCHFADGLVDPKYMPVASWESLNKTLEEAQSNYNDMIGAMNLVLFEDAMS 2864

Query: 63   HICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLA 122
            H+CRINRI+E PRGNALL+GVGGSGKQSLSRL+AFIS LE  QIQL+K YGIPDLK DLA
Sbjct: 2865 HVCRINRILEGPRGNALLIGVGGSGKQSLSRLAAFISGLEVSQIQLRKGYGIPDLKADLA 2924

Query: 123  SLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEP 182
             LY+KAG+KN   MFLMTD+QVA+E FLV+IND+LASGE+P+LF +DEI+NIVN  A   
Sbjct: 2925 VLYMKAGVKNVPCMFLMTDAQVAEESFLVLINDLLASGEIPELFPEDEIDNIVN--ALRN 2982

Query: 183  EIPLTADLDP--------LTMLTDDATIAFWNNEGLPNDRMSTENATILVNS------QR 228
            E+     LD         +  +     I    +      R+       LVN         
Sbjct: 2983 EVKQLGILDTKENCWKYFIEKVRKSLKIVLCFSPVGSTLRVRARKFPALVNCTAINWFHE 3042

Query: 229  WP--------------LMIDPQEVLRKPCAVFMAYVHSSVNQISVSYLLNERRYNYTTPK 274
            WP              + + P++++ +P AVFMAYVH +VN++S  YL NERRYNYTTPK
Sbjct: 3043 WPKTALESVSNRFLAEVDVMPRDLV-EPVAVFMAYVHGTVNEMSQIYLQNERRYNYTTPK 3101

Query: 275  SFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGN--------------------- 313
            SFLE I LY+K +K K  +    + R ++G+ KL                          
Sbjct: 3102 SFLELIALYSKFVKEKHTELNDRVHRLESGILKLAECAEQVDSLQVQLAEQEVVLKKKNQ 3161

Query: 314  -------------------------EEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQE 348
                                     EEKKVR I+EDV  K+K+C EDL KAEPAL+AAQ+
Sbjct: 3162 AADILIKDVGAKNETVQKEKNFAAEEEKKVRVIQEDVGAKKKICEEDLRKAEPALMAAQQ 3221

Query: 349  ALDTLDKNNLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQL-------- 400
            ALDTLDKNNLTELK+  +PP+ V+ VC AV VL  S +GK+PKD  WK  ++        
Sbjct: 3222 ALDTLDKNNLTELKSFGSPPEQVVKVCAAVLVLF-SPRGKIPKDRSWKSCKMMMNKVDVF 3280

Query: 401  ----------------------------------KALKAPPQGLCAWVINIITFYNVWTF 426
                                              +A  A   GLCAWVINI  FY V+  
Sbjct: 3281 LNDLLYYDKEHIQPDVIKALQEYLKDPEFDPEKIRAKSAAAAGLCAWVINIHKFYQVYLV 3340

Query: 427  VEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEEC 486
            VEPK++AL  A AEL AA  KL +L A+I  LE  L  +   F+ A+ EK  CQ++A++ 
Sbjct: 3341 VEPKQRALDEAEAELKAAQDKLIDLTARINELEDQLGVIQADFNDALAEKQKCQDEADKT 3400

Query: 487  AEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDL 546
            A  IDLA RLVNGLASENVRW++S+  L+   +TLPGD+LL+  F+SYVGCFTR YR++L
Sbjct: 3401 AFTIDLAHRLVNGLASENVRWRESIAQLKGQTVTLPGDVLLIACFISYVGCFTRRYRVEL 3460

Query: 547  LNKFWLPTIKKSK---------------------IDWFHE-WPQEALESVSLKFLVKSCE 584
              K W+PT + SK                       W +E  P + + S +   L  S  
Sbjct: 3461 QEKMWIPTFRLSKPAIPFTEGVDPLNLIVDDAVIASWNNEGLPSDRMSSENAAILTYSSR 3520

Query: 585  ---------------SHRYGNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVL 629
                             +YGN LTV+RL  +  +D IE+ V++G VLLIENIGE+VD VL
Sbjct: 3521 WPLMIDPQLQGIKWIKQKYGNDLTVLRLTARGYLDVIERCVVNGSVLLIENIGETVDAVL 3580

Query: 630  DNLIGRNLIRKGKVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDG 689
            D L+GR L++KG+ +++GEKEIDYNP F+LIL TKLANPHYKPEMQAQTTLINFTVTRDG
Sbjct: 3581 DPLLGRMLVKKGRCLRMGEKEIDYNPKFQLILQTKLANPHYKPEMQAQTTLINFTVTRDG 3640

Query: 690  LEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLV 749
            LE+QLLAEVVK ERPDLE  KA+LT +QN FKITLK LEDDLL RLSS+G +VL D +LV
Sbjct: 3641 LEEQLLAEVVKAERPDLEQQKADLTMQQNTFKITLKMLEDDLLSRLSSAGENVLEDASLV 3700

Query: 750  LNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQF 809
            +NLEK+KKTA E+E+KV+EGKKT++ ID ARE YRPAAERAS++YFI+N+L+KINPIYQF
Sbjct: 3701 INLEKTKKTAAEVEVKVREGKKTSEMIDVARESYRPAAERASILYFILNDLYKINPIYQF 3760

Query: 810  SLKAFTVVFHNAMTKAKKSDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQMTIQ 869
            SLKAFT VF +A+     ++ LK RV NL++SITF    YTSRGLFE+DKLIFMAQM IQ
Sbjct: 3761 SLKAFTTVFKDAIAGTPPAEKLKDRVFNLIDSITFAVHMYTSRGLFEKDKLIFMAQMAIQ 3820

Query: 870  VKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFL 929
                                                        I ++ KEI   ELDFL
Sbjct: 3821 --------------------------------------------ILLVAKEIDPAELDFL 3836

Query: 930  LRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDK 989
            LRFP+ P ++SP +FLTN  WGG++ALSN++EF++LDKDIE +AKRW+K IE E PE++K
Sbjct: 3837 LRFPYTPNLTSPFEFLTNAGWGGIKALSNMDEFRSLDKDIEGSAKRWRKLIESECPEREK 3896

Query: 990  LPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTT 1049
            +P EWKNK+ALQRLCIMRCLRPDRMTYAVR+FVEEK+G +YV AR +EF++S+RE+SS+T
Sbjct: 3897 MPGEWKNKNALQRLCIMRCLRPDRMTYAVRAFVEEKLGAKYVEARMVEFDKSFRETSSST 3956

Query: 1050 PIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAI 1109
            P+FFILSPGVDP +DVE +G+KM F+TD  N +NVSLGQGQEV+AE+ I  AS +GHW I
Sbjct: 3957 PVFFILSPGVDPLQDVEKLGKKMRFSTDHGNFYNVSLGQGQEVVAEKAIDDASREGHWVI 4016

Query: 1110 LQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNE 1169
            LQN+HLV  WLPTL+KKMEA+ E  ++NYRLFISAEPA  PEYHIIPQG+L+S+IKITNE
Sbjct: 4017 LQNIHLVAKWLPTLEKKMEATQEDSNENYRLFISAEPAPSPEYHIIPQGILESAIKITNE 4076

Query: 1170 PPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYP 1229
            PPTGM AN+HKALDNF QE LEMC KEAE+K+ILF+LCYFHAVVAERRKFGPQGWNR YP
Sbjct: 4077 PPTGMLANIHKALDNFNQETLEMCGKEAEFKAILFSLCYFHAVVAERRKFGPQGWNRVYP 4136

Query: 1230 FNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNP 1289
            FNVGDLTIS  VLYNYLEANN VPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEE M P
Sbjct: 4137 FNVGDLTISVYVLYNYLEANNRVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEELMQP 4196

Query: 1290 ELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFK 1349
            EL++G+  L  GFPAPPN DY GYH YID++LP ESP LYGLHPNAEIGFLTT +E +FK
Sbjct: 4197 ELVDGDLNLCTGFPAPPNLDYAGYHNYIDDNLPVESPYLYGLHPNAEIGFLTTLSEQLFK 4256

Query: 1350 IIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQ 1409
             IFELQPRD+ AA GS V+RE+ V+ ++++  DK P+ FN+ D+M RVEDRTP++IVAFQ
Sbjct: 4257 TIFELQPRDSGAASGSTVSREDVVKTIIEDFSDKLPEEFNMADLMARVEDRTPFVIVAFQ 4316

Query: 1410 ECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGL 1469
            ECERMNIL+ E+KRSL+EL LGLKGELTIT+DME LE S+F D VP +W KRAYPSM GL
Sbjct: 4317 ECERMNILVREMKRSLRELMLGLKGELTITSDMENLEASLFFDAVPENWTKRAYPSMFGL 4376

Query: 1470 GGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQ 1529
              WFADL +R+KELE+W  DF LPSSVWLAGFFNPQSFLTAIMQ TARKNEWPLDKMCL 
Sbjct: 4377 QSWFADLTIRIKELESWSNDFNLPSSVWLAGFFNPQSFLTAIMQQTARKNEWPLDKMCLS 4436

Query: 1530 CDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQ 1589
            CDVTKK +ED +  PR+GAYVNGLYMEGARWD+ +G I+ ++LKELFP MPVI+IKAITQ
Sbjct: 4437 CDVTKKFKEDISAPPREGAYVNGLYMEGARWDLNIGSIASSQLKELFPQMPVIFIKAITQ 4496

Query: 1590 DKQDLRNMYECPVYKTRQRGPNYVWTFNLKTKEKPAKWTMAGVALLF 1636
            DKQ+ +N+YECPVYKTR RGP YVWTFNLK+KE PAKWT+ GV LL 
Sbjct: 4497 DKQETKNIYECPVYKTRDRGPTYVWTFNLKSKENPAKWTLGGVCLLL 4543




Source: Aedes aegypti

Species: Aedes aegypti

Genus: Aedes

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383866400|ref|XP_003708658.1| PREDICTED: dynein beta chain, ciliary-like [Megachile rotundata] Back     alignment and taxonomy information
>gi|328700120|ref|XP_001950250.2| PREDICTED: dynein beta chain, ciliary-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|322788437|gb|EFZ14108.1| hypothetical protein SINV_80910 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|307168036|gb|EFN61360.1| Dynein beta chain, ciliary [Camponotus floridanus] Back     alignment and taxonomy information
>gi|170031290|ref|XP_001843519.1| dynein heavy chain [Culex quinquefasciatus] gi|167869546|gb|EDS32929.1| dynein heavy chain [Culex quinquefasciatus] Back     alignment and taxonomy information
>gi|328707060|ref|XP_001947345.2| PREDICTED: dynein heavy chain 17, axonemal-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|157120024|ref|XP_001653493.1| dynein heavy chain [Aedes aegypti] gi|108875107|gb|EAT39332.1| AAEL008855-PA [Aedes aegypti] Back     alignment and taxonomy information
>gi|350397082|ref|XP_003484764.1| PREDICTED: dynein beta chain, ciliary-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|332027796|gb|EGI67861.1| Dynein beta chain, ciliary [Acromyrmex echinatior] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1637
FB|FBgn00138124486 Dhc93AB "Dynein heavy chain at 0.441 0.160 0.698 0.0
UNIPROTKB|E1BLB44392 LOC788092 "Uncharacterized pro 0.439 0.163 0.688 0.0
UNIPROTKB|F1PN884427 DNAH17 "Uncharacterized protei 0.439 0.162 0.687 0.0
UNIPROTKB|F1NI204382 DNAH9 "Uncharacterized protein 0.437 0.163 0.684 0.0
UNIPROTKB|K7EK914457 DNAH17 "Dynein heavy chain 17, 0.439 0.161 0.681 0.0
UNIPROTKB|Q9NYC94486 DNAH9 "Dynein heavy chain 9, a 0.441 0.160 0.671 0.0
UNIPROTKB|F1NJ574370 DNAH9 "Uncharacterized protein 0.436 0.163 0.677 0.0
UNIPROTKB|F1PDR44485 DNAH9 "Uncharacterized protein 0.441 0.160 0.677 0.0
UNIPROTKB|F1NI324384 DNAH9 "Uncharacterized protein 0.441 0.164 0.668 0.0
UNIPROTKB|F1NVK14352 DNAH9 "Uncharacterized protein 0.441 0.165 0.668 0.0
FB|FBgn0013812 Dhc93AB "Dynein heavy chain at 93AB" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 2797 (989.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 505/723 (69%), Positives = 601/723 (83%)

Query:   914 ISMMKKEIAREELDFLLRFPFQPGVSSPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAA 973
             I +M +E+   ELDFLLRFP +P V+SPVDFLTN  WGG+ +L++ +EF+NLD+DIE ++
Sbjct:  3761 ILLMNEEVTSAELDFLLRFPIKPHVTSPVDFLTNQSWGGICSLASKDEFRNLDRDIETSS 3820

Query:   974 KRWKKYIEGETPEKDKLPQEWKNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNA 1033
             KRWKK +E E PEK+K PQEWKNK+ALQRLC++R LRPDRMTYA+  F+EEK+G +YV +
Sbjct:  3821 KRWKKLVESELPEKEKFPQEWKNKTALQRLCMIRALRPDRMTYALADFIEEKLGSKYVES 3880

Query:  1034 RAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVI 1093
             RA+EF +SY E+S +TPIFFILSPGV+P +DVEA+G++MGF+ DL N HNVSLGQGQE I
Sbjct:  3881 RAMEFAKSYEEASPSTPIFFILSPGVNPLKDVEALGKQMGFSMDLGNFHNVSLGQGQEAI 3940

Query:  1094 AEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYH 1153
             AE  +  A+  GHW +LQN+HLV+ WLP L+KK+E   E  H +YR+F+SAEPAS P  H
Sbjct:  3941 AEAAMDTAAKHGHWVVLQNIHLVRKWLPVLEKKLEYYAEDSHPDYRMFLSAEPASTPSAH 4000

Query:  1154 IIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVV 1213
             IIPQG+L+SSIKITNEPPTGM ANLHKALDNFTQE LEM  KEAE+K+ILF+LCYFHAVV
Sbjct:  4001 IIPQGILESSIKITNEPPTGMLANLHKALDNFTQETLEMSGKEAEFKAILFSLCYFHAVV 4060

Query:  1214 AERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEANNNVPWEDLRYLFGEIMYGGHITDD 1273
             AERRKFGPQGWN+ YPFNVGDL IS  VLYNYLEAN  VPWEDLRYLFGEIMYGGHITDD
Sbjct:  4061 AERRKFGPQGWNKIYPFNVGDLNISVSVLYNYLEANAKVPWEDLRYLFGEIMYGGHITDD 4120

Query:  1274 WDRRLCRTYLEEYMNPELLEGETKLAPGFPAPPNQDYQGYHTYIDESLPPESPILYGLHP 1333
             WDRRLC TYLEEYM P+L++GE  LAP FPAPPN DYQGYHTY+DE +P ESP LYGLHP
Sbjct:  4121 WDRRLCITYLEEYMQPDLVDGELFLAPSFPAPPNTDYQGYHTYVDEMMPAESPYLYGLHP 4180

Query:  1334 NAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDM 1393
             NAEIGFLTT+AEN+F+ +FE+QPRD  A  G+ VTRE+KV+Q++DEI++K P+ FN+ ++
Sbjct:  4181 NAEIGFLTTRAENIFRTVFEMQPRDAGAGGGATVTREDKVKQIVDEIIEKLPEEFNMVEI 4240

Query:  1394 MGRVEDRTPYIIVAFQECERMNILMSEIKRSXXXXXXXXXXXXTITTDMEALEYSIFMDT 1453
             M +VE+RTPY+IVAFQECERMN L SE+KRS            TIT+DME LE S+F+D 
Sbjct:  4241 MNKVEERTPYVIVAFQECERMNFLTSEMKRSLKELDLGLKGELTITSDMEVLENSLFLDQ 4300

Query:  1454 VPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQ 1513
             VPP W +RAYPS+LGL  WF DL LRL+ELE W  DF LPS VWLAGFFNPQS LTAIMQ
Sbjct:  4301 VPPIWTQRAYPSLLGLNNWFIDLCLRLRELETWSTDFVLPSCVWLAGFFNPQSLLTAIMQ 4360

Query:  1514 STARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLK 1573
             STAR+N+ PLDKMCLQCDVTKKQ+E+FT APRDG  V+G++MEGARWDI  G+I +++LK
Sbjct:  4361 STARRNDLPLDKMCLQCDVTKKQKEEFTTAPRDGCCVHGIFMEGARWDIQQGIIMESRLK 4420

Query:  1574 ELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGPN-YVWTFNLKTKEKPAKWTMAGV 1632
             EL+P MPVI I+AITQDKQDLRNMYECPVYKTR RGP  YV   NLKTK+KP KW +AGV
Sbjct:  4421 ELYPSMPVINIRAITQDKQDLRNMYECPVYKTRTRGPTTYVSNLNLKTKDKPGKWILAGV 4480

Query:  1633 ALL 1635
             ALL
Sbjct:  4481 ALL 4483


GO:0005875 "microtubule associated complex" evidence=ISS
GO:0005858 "axonemal dynein complex" evidence=ISS
GO:0003774 "motor activity" evidence=ISS
GO:0042623 "ATPase activity, coupled" evidence=ISS
GO:0007018 "microtubule-based movement" evidence=IEA;ISS
GO:0003777 "microtubule motor activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0016887 "ATPase activity" evidence=IEA
GO:0007605 "sensory perception of sound" evidence=IMP
UNIPROTKB|E1BLB4 LOC788092 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PN88 DNAH17 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NI20 DNAH9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|K7EK91 DNAH17 "Dynein heavy chain 17, axonemal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NYC9 DNAH9 "Dynein heavy chain 9, axonemal" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NJ57 DNAH9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1PDR4 DNAH9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1NI32 DNAH9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NVK1 DNAH9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9UFH2DYH17_HUMANNo assigned EC number0.54330.96270.3513yesN/A
Q69Z23DYH17_MOUSENo assigned EC number0.54590.96760.3534yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1637
pfam03028706 pfam03028, Dynein_heavy, Dynein heavy chain and re 0.0
pfam12780268 pfam12780, AAA_8, P-loop containing dynein motor r 8e-91
pfam12777344 pfam12777, MT, Microtubule-binding stalk of dynein 2e-83
pfam12781228 pfam12781, AAA_9, ATP-binding dynein motor region 3e-79
COG52453164 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] 4e-31
pfam12781228 pfam12781, AAA_9, ATP-binding dynein motor region 6e-18
COG52453164 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] 3e-09
pfam12780268 pfam12780, AAA_8, P-loop containing dynein motor r 1e-05
TIGR04211198 TIGR04211, SH3_and_anchor, SH3 domain protein 1e-04
pfam12777344 pfam12777, MT, Microtubule-binding stalk of dynein 0.002
>gnl|CDD|217325 pfam03028, Dynein_heavy, Dynein heavy chain and region D6 of dynein motor Back     alignment and domain information
 Score = 1064 bits (2754), Expect = 0.0
 Identities = 423/713 (59%), Positives = 532/713 (74%), Gaps = 20/713 (2%)

Query: 934  FQPGVSSPV-DFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQ 992
             +  V +P  D+LT   WG +  LS LEEF+ LD DIE  AKRWKK+ + E PE++KLPQ
Sbjct: 1    IESTVPNPKLDWLTVQQWGSICRLSELEEFRGLDDDIEKNAKRWKKWYDSEAPEEEKLPQ 60

Query: 993  EWK-NKSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYRESSSTTPI 1051
            EWK  KSA Q+L ++R LRPDRMTYA R+FV EK+G+++V  + ++  + Y ESS +TPI
Sbjct: 61   EWKDRKSAFQKLLLLRALRPDRMTYAARNFVSEKLGEKFVEPQPLDLSKIYEESSPSTPI 120

Query: 1052 FFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETIQIASTKGHWAILQ 1111
            FFILSPGVDP++DVE + +KMGF    +  H+VSLGQGQ  IAE+ I+ A+  GHW +LQ
Sbjct: 121  FFILSPGVDPSKDVEKLAKKMGFG---KKFHSVSLGQGQGPIAEKAIETAAKSGHWVMLQ 177

Query: 1112 NVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPP 1171
            N+HL  +WLPTL+KK+E+     H ++RLF++AEPA       IP G+L +SIKITNEPP
Sbjct: 178  NIHLAPSWLPTLEKKLESLTPGSHPDFRLFLTAEPAPS-----IPIGLLQNSIKITNEPP 232

Query: 1172 TGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFN 1231
            TG++ANL +AL +FTQE LEMC K AE+K ILF LC+FHAVV ERRKFGP GWN+SY FN
Sbjct: 233  TGLKANLLRALSSFTQETLEMCKKPAEFKRILFLLCFFHAVVQERRKFGPLGWNKSYEFN 292

Query: 1232 VGDLTISSLVLYNYLEANN--NVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNP 1289
             GDL IS  VL NYL+AN    VPWEDLRYLFGEIMYGG ITDDWDRRL RTYLEE+  P
Sbjct: 293  EGDLRISLDVLDNYLDANAPDKVPWEDLRYLFGEIMYGGRITDDWDRRLLRTYLEEFFTP 352

Query: 1290 ELLEGETKLAP---GFPAPPNQDYQGYHTYIDESLPPES-PILYGLHPNAEIGFLTTQAE 1345
             L + E +LAP   GF  PP  DY+GY  YI+E LPPES P  YGLHPNAEIGFLT Q E
Sbjct: 353  RLFDPELELAPGDLGFAVPPGTDYEGYLQYIEE-LPPESSPEWYGLHPNAEIGFLTQQTE 411

Query: 1346 NVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRV--EDRTPY 1403
             + + + ELQPR+   + GSGV+REE V+QVL +IL+K P  F I+++  +   E + P 
Sbjct: 412  KLIRTLLELQPREAGGSGGSGVSREEVVKQVLRDILEKLPKLFPIEEIKLKRTEEIKDPL 471

Query: 1404 IIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAY 1463
              V FQE ERMN L+ EI+RSLKEL+LGLKGELT+T D+E L  ++F   VP SW K AY
Sbjct: 472  FRVLFQEIERMNKLLKEIRRSLKELDLGLKGELTMTNDLEDLAKALFKGRVPASWAKLAY 531

Query: 1464 PSMLGLGGWFADLMLRLKELENWVGDFQLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPL 1523
            PS+  LG W  DL+ R+++L++W  DF  P +VWL+GFFNPQSFLTAIMQS ARKN+WPL
Sbjct: 532  PSLKPLGSWVTDLLRRIRQLQDWTEDFGKPKTVWLSGFFNPQSFLTAIMQSVARKNKWPL 591

Query: 1524 DKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIY 1583
            DK+CLQ DVTKK++E+F  APRDG YV+GL++EGARWD   G++ +++ KELF  MPVI+
Sbjct: 592  DKLCLQTDVTKKEKEEFDSAPRDGFYVHGLFLEGARWDGQNGLLLESRPKELFSPMPVIW 651

Query: 1584 IKAITQDKQDLRNMYECPVYKTRQRGP-NYVWTFNLKTKEKPAKWTMAGVALL 1635
            +KA+  DKQ+ +++YECPVYKT  RG   YV+TF LKTKE P+KW +AGVALL
Sbjct: 652  VKAVPADKQEEKSVYECPVYKTETRGGTTYVFTFLLKTKEPPSKWILAGVALL 704


This family represents the C-terminal region of dynein heavy chain. The chain also contains ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. Dynein is also involved in cilia and flagella movement. The dynein subunit consists of at least two heavy chains and a number of intermediate and light chains. The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This C-terminal domain carries the D6 region of the dynein motor where the P-loop has been lost in evolution but the general structure of a potential ATP binding site appears to be retained. Length = 706

>gnl|CDD|193256 pfam12780, AAA_8, P-loop containing dynein motor region D4 Back     alignment and domain information
>gnl|CDD|193253 pfam12777, MT, Microtubule-binding stalk of dynein motor Back     alignment and domain information
>gnl|CDD|193257 pfam12781, AAA_9, ATP-binding dynein motor region D5 Back     alignment and domain information
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|193257 pfam12781, AAA_9, ATP-binding dynein motor region D5 Back     alignment and domain information
>gnl|CDD|227570 COG5245, DYN1, Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|193256 pfam12780, AAA_8, P-loop containing dynein motor region D4 Back     alignment and domain information
>gnl|CDD|234501 TIGR04211, SH3_and_anchor, SH3 domain protein Back     alignment and domain information
>gnl|CDD|193253 pfam12777, MT, Microtubule-binding stalk of dynein motor Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1637
PF03028707 Dynein_heavy: Dynein heavy chain and region D6 of 100.0
KOG3595|consensus1395 100.0
COG52453164 DYN1 Dynein, heavy chain [Cytoskeleton] 100.0
PF12780268 AAA_8: P-loop containing dynein motor region D4; I 100.0
PF12777344 MT: Microtubule-binding stalk of dynein motor; Int 100.0
PF12781228 AAA_9: ATP-binding dynein motor region D5; PDB: 3V 100.0
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 97.07
PF00004132 AAA: ATPase family associated with various cellula 97.01
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 96.77
COG2256436 MGS1 ATPase related to the helicase subunit of the 96.75
KOG1969|consensus877 96.73
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 96.35
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 96.34
PRK14949944 DNA polymerase III subunits gamma and tau; Provisi 96.26
PRK12323700 DNA polymerase III subunits gamma and tau; Provisi 96.1
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 95.97
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 95.88
PRK07994647 DNA polymerase III subunits gamma and tau; Validat 95.82
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 95.81
PRK04195482 replication factor C large subunit; Provisional 95.76
PRK14951618 DNA polymerase III subunits gamma and tau; Provisi 95.67
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 95.61
PRK14960702 DNA polymerase III subunits gamma and tau; Provisi 95.58
PRK07764824 DNA polymerase III subunits gamma and tau; Validat 95.51
PRK13342413 recombination factor protein RarA; Reviewed 95.48
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 95.48
CHL00195489 ycf46 Ycf46; Provisional 95.43
PRK10865857 protein disaggregation chaperone; Provisional 95.42
KOG0250|consensus1074 95.38
TIGR00635305 ruvB Holliday junction DNA helicase, RuvB subunit. 95.36
PLN00020413 ribulose bisphosphate carboxylase/oxygenase activa 95.36
PHA02544316 44 clamp loader, small subunit; Provisional 95.36
PF05496233 RuvB_N: Holliday junction DNA helicase ruvB N-term 95.25
PRK14952584 DNA polymerase III subunits gamma and tau; Provisi 95.22
PRK07003830 DNA polymerase III subunits gamma and tau; Validat 95.18
PRK13341725 recombination factor protein RarA/unknown domain f 95.02
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 94.95
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 94.92
PRK11331459 5-methylcytosine-specific restriction enzyme subun 94.9
PRK14958509 DNA polymerase III subunits gamma and tau; Provisi 94.9
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 94.9
PRK14959624 DNA polymerase III subunits gamma and tau; Provisi 94.82
PRK07133725 DNA polymerase III subunits gamma and tau; Validat 94.71
PF12781228 AAA_9: ATP-binding dynein motor region D5; PDB: 3V 94.71
TIGR01650327 PD_CobS cobaltochelatase, CobS subunit. This model 94.69
COG52453164 DYN1 Dynein, heavy chain [Cytoskeleton] 94.65
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 94.61
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 94.61
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 94.54
PLN03025319 replication factor C subunit; Provisional 94.44
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 94.25
PRK14950585 DNA polymerase III subunits gamma and tau; Provisi 94.23
PRK14963504 DNA polymerase III subunits gamma and tau; Provisi 94.19
PRK00080328 ruvB Holliday junction DNA helicase RuvB; Reviewed 94.16
smart00382148 AAA ATPases associated with a variety of cellular 94.04
PRK14957546 DNA polymerase III subunits gamma and tau; Provisi 94.03
PRK05896605 DNA polymerase III subunits gamma and tau; Validat 94.0
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 94.0
TIGR02639731 ClpA ATP-dependent Clp protease ATP-binding subuni 94.0
PRK08691709 DNA polymerase III subunits gamma and tau; Validat 93.97
TIGR00382413 clpX endopeptidase Clp ATP-binding regulatory subu 93.96
CHL00095821 clpC Clp protease ATP binding subunit 93.95
CHL00176638 ftsH cell division protein; Validated 93.68
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 93.54
TIGR03185650 DNA_S_dndD DNA sulfur modification protein DndD. T 93.39
PRK14969527 DNA polymerase III subunits gamma and tau; Provisi 93.38
PRK05201443 hslU ATP-dependent protease ATP-binding subunit Hs 93.29
PTZ00454398 26S protease regulatory subunit 6B-like protein; P 93.26
PRK14954620 DNA polymerase III subunits gamma and tau; Provisi 93.23
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 93.19
PRK03992389 proteasome-activating nucleotidase; Provisional 93.15
KOG0730|consensus693 93.1
PRK14955397 DNA polymerase III subunits gamma and tau; Provisi 93.02
PRK05563559 DNA polymerase III subunits gamma and tau; Validat 92.95
PRK12402337 replication factor C small subunit 2; Reviewed 92.82
TIGR00390441 hslU ATP-dependent protease HslVU, ATPase subunit. 92.79
TIGR01241495 FtsH_fam ATP-dependent metalloprotease FtsH. HflB( 92.76
PRK14948620 DNA polymerase III subunits gamma and tau; Provisi 92.69
PRK07940394 DNA polymerase III subunit delta'; Validated 92.67
KOG2028|consensus554 92.67
COG0464494 SpoVK ATPases of the AAA+ class [Posttranslational 92.62
PRK14953486 DNA polymerase III subunits gamma and tau; Provisi 92.62
KOG0994|consensus1758 92.57
TIGR021691164 SMC_prok_A chromosome segregation protein SMC, pri 92.55
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 92.37
TIGR00763775 lon ATP-dependent protease La. This protein is ind 92.27
PTZ00361438 26 proteosome regulatory subunit 4-like protein; P 92.18
TIGR02928365 orc1/cdc6 family replication initiation protein. M 92.07
PRK11034758 clpA ATP-dependent Clp protease ATP-binding subuni 92.06
PRK09111598 DNA polymerase III subunits gamma and tau; Validat 92.05
PRK00440319 rfc replication factor C small subunit; Reviewed 91.95
TIGR01242364 26Sp45 26S proteasome subunit P45 family. Many pro 91.85
KOG0733|consensus802 91.75
PRK06647563 DNA polymerase III subunits gamma and tau; Validat 91.54
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 91.26
COG0714329 MoxR-like ATPases [General function prediction onl 91.22
PHA02244383 ATPase-like protein 91.12
PF07726131 AAA_3: ATPase family associated with various cellu 91.03
PRK14965576 DNA polymerase III subunits gamma and tau; Provisi 91.02
KOG0743|consensus457 90.97
PF00931287 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is 90.91
PRK10733644 hflB ATP-dependent metalloprotease; Reviewed 90.89
PF05673249 DUF815: Protein of unknown function (DUF815); Inte 90.87
KOG0738|consensus491 90.64
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 90.27
TIGR01243733 CDC48 AAA family ATPase, CDC48 subfamily. This sub 90.07
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 90.02
PRK08118167 topology modulation protein; Reviewed 89.9
PRK13949169 shikimate kinase; Provisional 89.87
PRK13948182 shikimate kinase; Provisional 89.76
TIGR03689512 pup_AAA proteasome ATPase. In the Actinobacteria, 89.67
PF00448196 SRP54: SRP54-type protein, GTPase domain; InterPro 89.66
PF03028707 Dynein_heavy: Dynein heavy chain and region D6 of 89.48
KOG0733|consensus802 88.9
TIGR00602637 rad24 checkpoint protein rad24. This family is bas 88.86
PRK05564313 DNA polymerase III subunit delta'; Validated 88.74
COG0470325 HolB ATPase involved in DNA replication [DNA repli 88.63
PRK10865857 protein disaggregation chaperone; Provisional 88.56
COG307479 Uncharacterized protein conserved in bacteria [Fun 88.52
PRK00411394 cdc6 cell division control protein 6; Reviewed 88.46
COG5271 4600 MDN1 AAA ATPase containing von Willebrand factor t 88.26
TIGR03345852 VI_ClpV1 type VI secretion ATPase, ClpV1 family. M 87.98
PRK08154309 anaerobic benzoate catabolism transcriptional regu 87.97
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 87.95
COG0466782 Lon ATP-dependent Lon protease, bacterial type [Po 87.86
TIGR00767415 rho transcription termination factor Rho. Members 87.85
CHL00095821 clpC Clp protease ATP binding subunit 87.51
COG3638258 ABC-type phosphate/phosphonate transport system, A 87.45
KOG0736|consensus953 87.43
TIGR03346852 chaperone_ClpB ATP-dependent chaperone ClpB. Membe 87.41
PF1324576 AAA_19: Part of AAA domain 87.4
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 87.24
PRK10787784 DNA-binding ATP-dependent protease La; Provisional 87.09
PF01637234 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 87.07
PRK13947171 shikimate kinase; Provisional 86.97
KOG3354|consensus191 86.95
PRK08084235 DNA replication initiation factor; Provisional 86.93
PRK07261171 topology modulation protein; Provisional 86.86
PRK06305451 DNA polymerase III subunits gamma and tau; Validat 86.74
PRK08451535 DNA polymerase III subunits gamma and tau; Validat 86.69
PF121281201 DUF3584: Protein of unknown function (DUF3584); In 86.61
COG2255332 RuvB Holliday junction resolvasome, helicase subun 86.54
PF13173128 AAA_14: AAA domain 86.49
PRK14088440 dnaA chromosomal replication initiation protein; P 86.26
KOG0734|consensus752 86.13
PRK1542279 septal ring assembly protein ZapB; Provisional 85.98
COG4942420 Membrane-bound metallopeptidase [Cell division and 85.77
PRK00625173 shikimate kinase; Provisional 85.75
PF12774231 AAA_6: Hydrolytic ATP binding site of dynein motor 85.75
PRK13946184 shikimate kinase; Provisional 85.62
PLN02199303 shikimate kinase 85.39
PRK07952244 DNA replication protein DnaC; Validated 85.33
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 85.29
KOG1029|consensus1118 85.28
PRK05057172 aroK shikimate kinase I; Reviewed 85.25
PRK11637428 AmiB activator; Provisional 85.25
PRK05707328 DNA polymerase III subunit delta'; Validated 85.22
COG0703172 AroK Shikimate kinase [Amino acid transport and me 85.19
TIGR02397355 dnaX_nterm DNA polymerase III, subunit gamma and t 85.17
KOG0731|consensus774 85.16
CHL00181287 cbbX CbbX; Provisional 85.13
PRK13531498 regulatory ATPase RavA; Provisional 84.76
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 84.44
PRK14970367 DNA polymerase III subunits gamma and tau; Provisi 83.88
PRK12377248 putative replication protein; Provisional 83.62
PLN02165334 adenylate isopentenyltransferase 83.29
PRK09087226 hypothetical protein; Validated 83.28
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 83.21
PRK00131175 aroK shikimate kinase; Reviewed 83.2
PRK03839180 putative kinase; Provisional 82.91
PTZ00202550 tuzin; Provisional 82.67
PF00025175 Arf: ADP-ribosylation factor family The prints ent 81.89
cd01128249 rho_factor Transcription termination factor rho is 81.84
KOG0991|consensus333 81.76
PF08317325 Spc7: Spc7 kinetochore protein; InterPro: IPR01325 81.52
PRK10884206 SH3 domain-containing protein; Provisional 81.44
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 81.31
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 81.23
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 81.2
PRK06217183 hypothetical protein; Validated 81.17
cd00464154 SK Shikimate kinase (SK) is the fifth enzyme in th 81.06
CHL002062281 ycf2 Ycf2; Provisional 80.85
COG1219408 ClpX ATP-dependent protease Clp, ATPase subunit [P 80.84
PRK14971614 DNA polymerase III subunits gamma and tau; Provisi 80.71
TIGR02903615 spore_lon_C ATP-dependent protease, Lon family. Me 80.71
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 80.66
KOG0728|consensus404 80.55
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 80.47
KOG0739|consensus439 80.26
PRK00149450 dnaA chromosomal replication initiation protein; R 80.2
COG2607287 Predicted ATPase (AAA+ superfamily) [General funct 80.12
>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella Back     alignment and domain information
Probab=100.00  E-value=3.3e-132  Score=1303.66  Aligned_cols=691  Identities=42%  Similarity=0.828  Sum_probs=521.6

Q ss_pred             CcccccccccccccccccchhhhhccchhhHHHHHHHHhhhhcCCCCcCCCchhhc-cchHHHHHHHhhhcCCCchhHHH
Q psy2649         940 SPVDFLTNTLWGGVRALSNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWK-NKSALQRLCIMRCLRPDRMTYAV 1018 (1637)
Q Consensus       940 ~~~~wl~~~~w~~i~~L~~l~~F~~l~~~~~~~~~~W~~~~~s~~pe~~~lp~~~~-~l~~fqklll~r~lrpdrl~~~~ 1018 (1637)
                      +.++|++++.|.+++.|+.+|.|.+|.++|..+.++|++|+++..||..++|..|. ++++|||+||+||+||||+..++
T Consensus         7 p~~~wl~~~~w~~i~~L~~l~~F~~l~~~~~~~~~~W~~~~~~~~pe~~~~P~~~~~~l~~fqklllir~lRpDrl~~~~   86 (707)
T PF03028_consen    7 PIPSWLSDEQWQNICALSKLPSFKGLCESIESNPEEWKQWFESDSPEEEPLPSPWEENLTPFQKLLLIRALRPDRLIAAM   86 (707)
T ss_dssp             GTTTS-HHHHHHHHHHHHC-GGGSSHHHHHHHTHHHHHHHC-SS-SS-----HHHHHHHHHHHHHHHHHHH-CCCHHHHH
T ss_pred             CCcCcCCHHHHHHHHHHhCCcchHHHHHHHHhCHHHHHHHHcCCCcccccCChhhhhcccHHHHHHHHHHhCccHhHHHH
Confidence            34699999999999999999999999999999999999999999999999999997 89999999999999999999999


Q ss_pred             HHHHHHhhcCccccccccchhhhhhccCCCCcEEEEeCCCCCCchhHHHhccccceeccCCCccccccCCchhHHHHhHH
Q psy2649        1019 RSFVEEKMGDRYVNARAIEFEQSYRESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSLGQGQEVIAEETI 1098 (1637)
Q Consensus      1019 ~~~v~~~lg~~~~~~~~~~l~~~~~~s~~~~Pii~ils~g~DP~~~i~~~A~~~~~~~~~~~l~~iSlG~gq~~~a~~~l 1098 (1637)
                      ++||..+||..|.+++++|++.+|++|++++|+||+++||+||+..|.++|+++++  +++++++||||+||+..|+++|
T Consensus        87 ~~~v~~~lg~~~~~~~~~~l~~~~~~s~~~~Pil~~~s~g~Dp~~~i~~lA~~~~~--~~~~~~~islG~~~~~~a~~~l  164 (707)
T PF03028_consen   87 RKFVSSVLGSRFVEPPPFDLESIYEESSPTTPILFILSPGSDPSSEIEQLAKKKGF--GNKKLQSISLGSGQGPEAEKAL  164 (707)
T ss_dssp             HHHHHHHH-TTTTS-----HHHHHHCTTTTC-EEEEE-TT--THHHHHHHHHCTT-------EEEEETTSHHHHHHHHHH
T ss_pred             HHHHHHHcCchhhcCCCCCHHHHHHhcCCCCceEEEeCCCCChHHHHHHHHHHHhh--hhhheeecCCCCchHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999873  2368999999999999999999


Q ss_pred             HhhhccCCEEEEehhhhHHhhhhcHHHHHHhhhcCCCCceeEEEecCCCCCCCccccccccccccccccCCCCchhhhhH
Q psy2649        1099 QIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHIIPQGVLDSSIKITNEPPTGMQANL 1178 (1637)
Q Consensus      1099 ~~a~~~G~WvlL~N~HL~~~wl~~Le~~l~~~~~~~h~~FRLwLts~~~~~~~~~~fP~~lLq~s~kv~~E~p~glk~~l 1178 (1637)
                      ++|+++|+||+||||||+++||+.|+++++.+..+.|++|||||||++++.     ||++||++|+||+||+|+|+|+||
T Consensus       165 ~~a~~~G~Wv~L~N~HL~~~wl~~Le~~l~~~~~~~h~~FRL~lt~~~~~~-----~P~~lL~~s~kv~~E~p~gik~~l  239 (707)
T PF03028_consen  165 KEAAKEGHWVLLQNCHLAPSWLPQLEKKLESLSPEIHPNFRLFLTSEPSPS-----FPISLLQSSIKVTYEPPPGIKANL  239 (707)
T ss_dssp             HHHHHHTSEEEEETGGGGCCCHHCHHHHHHC-SSTTSTT-EEEEEEESSTT-----S-HHHHHCSEEEEE---SSHHHHH
T ss_pred             HHHhcCCeEEEcccchhHHHHHHHHHHHHhccccccccceEEEEEecCccc-----CCHHHHHcccceeeCChhHHHHHH
Confidence            999999999999999999999999999998876567999999999999985     999999999999999999999999


Q ss_pred             HHHhhcCChhHHhhhhhhhhhHHHHHHHHHHHHhhhhhhccCCCCCCCcccccCCcceEeehhhHHHhhhc--CCCCcch
Q psy2649        1179 HKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLEAN--NNVPWED 1256 (1637)
Q Consensus      1179 ~~~~~~~~~~~~~~~~~~~~~~~l~f~L~~fHavl~eR~~y~plGw~~~Y~f~~~Dl~~~~~~l~~~l~~~--~~ipw~a 1256 (1637)
                      .++|.++.++.+..+.++.++++++|+||||||||+||++|||+|||++||||++||.++++++..+++..  +.+||++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~l~f~L~~fHavl~eR~~y~p~Gw~~~Y~f~~sDl~~a~~~l~~~~~~~~~~~ipw~~  319 (707)
T PF03028_consen  240 LRTYNSISQDFFEMCSKPPEWRRLLFLLAWFHAVLQERRRYGPLGWNKPYEFNDSDLRAALDILDNWLDESSPESIPWDA  319 (707)
T ss_dssp             HHHHCC--SCCHHHTSSSCHHHHHHHHHHHHHHHHHHHHHCTTTTSSS-----HHHHHHHHHHHHHHHHHCSCCCTTHHH
T ss_pred             HHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHhcCCcccceeeeechHHHHHHHHHHHHHHhhccccCCcHHH
Confidence            99999988878888888889999999999999999999999999999999999999999999999999987  7999999


Q ss_pred             hhHHHhhhccCCCCCChhhhHHHHHHHHHhcCcccccccccccC---CCCCCCCCCccccccccccCCCCCCCcccccCC
Q psy2649        1257 LRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAP---GFPAPPNQDYQGYHTYIDESLPPESPILYGLHP 1333 (1637)
Q Consensus      1257 l~~li~ei~YGGrv~d~~Drr~L~~~l~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~i~~l~~~~~p~~~gl~~ 1333 (1637)
                      |+|++|+++|||||+|+||||+|++|+++||+++++++++.+.+   ++.+|...++++|.+||+++|..++|++||||+
T Consensus       320 l~~l~~~i~YGGrv~d~~D~r~l~~~~~~~f~~~~~~~~~~l~~~~~~~~~P~~~~~~~~~~~i~~lp~~~~p~~~GL~~  399 (707)
T PF03028_consen  320 LRYLIGEIVYGGRVDDEWDRRLLNTLLNQFFNPEIFDPDFQLSPDSGSYSIPDSNSLEDYIEWIEQLPDEDPPEWFGLPP  399 (707)
T ss_dssp             HHHHHHHTTTTTT-SSHHHHHHHHHHHHHHSSGGGGSTT-EEET-TTTEE----SSHHHHHHHHCTS-SS--CCCCTS-T
T ss_pred             HHHHhhhceecCeeccHHHHHHHHHHHHHHcCchhhcchhhcccCCCCccCCccccHHHHHHHHHhCCCCCCccccCCCc
Confidence            99999999999999999999999999999999999999988876   678899899999999999988889999999999


Q ss_pred             CccccchhhhhHHHHHHHHhcccCCccCCCCCCcchHHHHHHHHHHHHHhCCCCCcHhhhhhcc---ccCCceEEEeehh
Q psy2649        1334 NAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGVTREEKVRQVLDEILDKCPDAFNIKDMMGRV---EDRTPYIIVAFQE 1410 (1637)
Q Consensus      1334 na~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~---~~~~p~~~~l~qE 1410 (1637)
                      ||++.+...+++.++++++.+++.....+.+++.+.++.+.+.+.++++++|..++......+.   ...+|+..|+.||
T Consensus       400 na~~~~~~~~s~~ll~~l~~l~~~~~~~~~~~~~s~~~~~~~~i~~l~~~lp~~~~~~~~~~~~~~~~~~~Pl~~fl~qE  479 (707)
T PF03028_consen  400 NAEISLQQQESRELLSSLLSLQPRESSSSGGSSKSREEQVLSLIKELLEKLPQLFPIEEVKSKRPAENSNDPLNRFLEQE  479 (707)
T ss_dssp             THHHHHHHHHHHHHHHHHHHCCCTTT----------HHHHCT-----------------------------HHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhhhhcccccccccccccccchhHHHHHHHHHHHHhhccCCHHHHhccCCccccCCceeeeeHHH
Confidence            9999999999999999999999987665434445567788889999999999988876655543   2468999999999


Q ss_pred             hhhhHhHHHHHHhhhhhhccccccceeecccHHHHhhcccccCCCchhhhcccccccchhHHHHHHHHHHHHHhhhhccC
Q psy2649        1411 CERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDF 1490 (1637)
Q Consensus      1411 ~~~~n~Ll~~I~~sL~~l~~~l~G~~~~s~~l~~l~~~L~~~~VP~~W~~~~~~s~~~l~~Wl~dL~~R~~~l~~w~~~~ 1490 (1637)
                      ++++|+|++.|+++|++|.++++|.+.||+++++++++|..|+||..|.+++||+++++.+|++||.+|++|+.+|....
T Consensus       480 ~~~~~~LL~~I~~sL~~L~~~lkG~~~~t~~l~~l~~~L~~~~VP~~W~~~~~~s~~~l~~Wl~dL~~Rv~~l~~w~~~~  559 (707)
T PF03028_consen  480 IERFNKLLQIIRQSLQELQKALKGEIKMTNELEALAQSLLKGQVPKSWLRYSYPSPKPLSSWLQDLIKRVEQLQRWASNS  559 (707)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---------HHHHHHHHHHHHTS--GGG--S---SS--HHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHhCCCChhHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999875


Q ss_pred             CCCchhhcccccCchhHHHHHHHHhhhhcCCCccccccccccccccccccCCCCCCCccccccccccccccccccccccc
Q psy2649        1491 QLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDA 1570 (1637)
Q Consensus      1491 ~~p~~~wL~~~f~P~aFLtA~~Q~~ar~~~~~ld~L~~~~~v~~~~~~~~~~~~~~g~~I~GL~L~Ga~wd~~~~~L~e~ 1570 (1637)
                      +.|..|||||||||+|||||+||++||++++|+|+|.|.++|.....+....+|++|+||+||+|+||+||...+++.++
T Consensus       560 ~~p~~~wLs~ff~P~aFLtAlrQ~~AR~~~~~ld~L~l~~~v~~~~~~~~~~~~~~g~~I~GL~leGA~wd~~~~~l~~~  639 (707)
T PF03028_consen  560 GQPKSFWLSGFFNPQAFLTALRQEYARKNKIPLDQLTLSFEVTSSEDENIRSPPEDGVYIHGLFLEGARWDGQKGCLEES  639 (707)
T ss_dssp             -----B-GGGSS-HHHHHHHHHHHHHHHTT-----EE--EE--------------EEEEE-SEEEESSEEET-TCEE--S
T ss_pred             CCceEEecccccChHHHHHHHHHHHHHhcCcCchhcceeEEEEeccccccccccccceEEEeEEecccEeccccCcccCC
Confidence            67999999999999999999999999999999999999999998765555557899999999999999999999999999


Q ss_pred             cccccCCCCcEEEEEeeccchhhccccccCccccccccCC-cEEEEEecccCCCCcchhhhhhhhccC
Q psy2649        1571 KLKELFPMMPVIYIKAITQDKQDLRNMYECPVYKTRQRGP-NYVWTFNLKTKEKPAKWTMAGVALLFM 1637 (1637)
Q Consensus      1571 ~~~~~~~~lP~i~~~~~~~~~~~~~~~y~cPvY~~~~R~~-n~i~~~~l~~~~~~~~wi~rGvAl~~~ 1637 (1637)
                      .++.++++||++|++|+..........|.||||+|+.|++ |||++++|||+.++++||+|||||+||
T Consensus       640 ~~~~~~~~~pv~~~~~~~~~~~~~~~~y~~PvY~~~~R~~~~~v~~l~l~~~~~~~~Wi~rGvAl~lq  707 (707)
T PF03028_consen  640 SPKSLYPPMPVIWLKPVQASPQSSDNSYECPVYKTSSREGLNFVFSLPLPTDEDPDHWILRGVALLLQ  707 (707)
T ss_dssp             SSEEEES-EEEE-EE-----TTCGGCSEEEEEESSTT--S--EEEEEEE-B-T-HHHHHTTT-EEES-
T ss_pred             CcccccccCceeEeccccccccCCCCEEECCceecCcCCCCeEEEEEEcCCCCCHHHHHHHhHHHhcC
Confidence            9999999999999999876555667899999999999985 899999999999999999999999998



The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits, intermediate size subunits and small subunits (see IPR001372 from INTERPRO). This family represents the C-terminal region of dynein heavy chain. The dynein heavy chain also exhibits ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. ; GO: 0003777 microtubule motor activity, 0007018 microtubule-based movement, 0030286 dynein complex; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A.

>KOG3595|consensus Back     alignment and domain information
>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases Back     alignment and domain information
>PF12777 MT: Microtubule-binding stalk of dynein motor; InterPro: IPR024743 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases Back     alignment and domain information
>PF12781 AAA_9: ATP-binding dynein motor region D5; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG1969|consensus Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>PRK14949 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK12323 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>PRK07994 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>PRK14951 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14960 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07764 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>CHL00195 ycf46 Ycf46; Provisional Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>KOG0250|consensus Back     alignment and domain information
>TIGR00635 ruvB Holliday junction DNA helicase, RuvB subunit Back     alignment and domain information
>PLN00020 ribulose bisphosphate carboxylase/oxygenase activase -RuBisCO activase (RCA); Provisional Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>PF05496 RuvB_N: Holliday junction DNA helicase ruvB N-terminus; InterPro: IPR008824 The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair Back     alignment and domain information
>PRK14952 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK13341 recombination factor protein RarA/unknown domain fusion protein; Reviewed Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional Back     alignment and domain information
>PRK14958 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07133 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF12781 AAA_9: ATP-binding dynein motor region D5; PDB: 3VKG_A 3VKH_C 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>TIGR01650 PD_CobS cobaltochelatase, CobS subunit Back     alignment and domain information
>COG5245 DYN1 Dynein, heavy chain [Cytoskeleton] Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK00080 ruvB Holliday junction DNA helicase RuvB; Reviewed Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05896 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit clpA Back     alignment and domain information
>PRK08691 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR00382 clpX endopeptidase Clp ATP-binding regulatory subunit (clpX) Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>CHL00176 ftsH cell division protein; Validated Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05201 hslU ATP-dependent protease ATP-binding subunit HslU; Provisional Back     alignment and domain information
>PTZ00454 26S protease regulatory subunit 6B-like protein; Provisional Back     alignment and domain information
>PRK14954 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>PRK03992 proteasome-activating nucleotidase; Provisional Back     alignment and domain information
>KOG0730|consensus Back     alignment and domain information
>PRK14955 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK05563 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>TIGR00390 hslU ATP-dependent protease HslVU, ATPase subunit Back     alignment and domain information
>TIGR01241 FtsH_fam ATP-dependent metalloprotease FtsH Back     alignment and domain information
>PRK14948 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK07940 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>KOG2028|consensus Back     alignment and domain information
>COG0464 SpoVK ATPases of the AAA+ class [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14953 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0994|consensus Back     alignment and domain information
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>TIGR00763 lon ATP-dependent protease La Back     alignment and domain information
>PTZ00361 26 proteosome regulatory subunit 4-like protein; Provisional Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>PRK11034 clpA ATP-dependent Clp protease ATP-binding subunit; Provisional Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>TIGR01242 26Sp45 26S proteasome subunit P45 family Back     alignment and domain information
>KOG0733|consensus Back     alignment and domain information
>PRK06647 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>COG0714 MoxR-like ATPases [General function prediction only] Back     alignment and domain information
>PHA02244 ATPase-like protein Back     alignment and domain information
>PF07726 AAA_3: ATPase family associated with various cellular activities (AAA); InterPro: IPR011703 This entry includes some of the AAA proteins not detected by the IPR003959 from INTERPRO model Back     alignment and domain information
>PRK14965 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>KOG0743|consensus Back     alignment and domain information
>PF00931 NB-ARC: NB-ARC domain; InterPro: IPR002182 This is the NB-ARC domain, a novel signalling motif found in bacteria and eukaryotes, shared by plant resistance gene products and regulators of cell death in animals [] Back     alignment and domain information
>PRK10733 hflB ATP-dependent metalloprotease; Reviewed Back     alignment and domain information
>PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function Back     alignment and domain information
>KOG0738|consensus Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>TIGR01243 CDC48 AAA family ATPase, CDC48 subfamily Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>PRK13949 shikimate kinase; Provisional Back     alignment and domain information
>PRK13948 shikimate kinase; Provisional Back     alignment and domain information
>TIGR03689 pup_AAA proteasome ATPase Back     alignment and domain information
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] Back     alignment and domain information
>PF03028 Dynein_heavy: Dynein heavy chain and region D6 of dynein motor; InterPro: IPR004273 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella Back     alignment and domain information
>KOG0733|consensus Back     alignment and domain information
>TIGR00602 rad24 checkpoint protein rad24 Back     alignment and domain information
>PRK05564 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG0470 HolB ATPase involved in DNA replication [DNA replication, recombination, and repair] Back     alignment and domain information
>PRK10865 protein disaggregation chaperone; Provisional Back     alignment and domain information
>COG3074 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>COG5271 MDN1 AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] Back     alignment and domain information
>TIGR03345 VI_ClpV1 type VI secretion ATPase, ClpV1 family Back     alignment and domain information
>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>COG0466 Lon ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR00767 rho transcription termination factor Rho Back     alignment and domain information
>CHL00095 clpC Clp protease ATP binding subunit Back     alignment and domain information
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG0736|consensus Back     alignment and domain information
>TIGR03346 chaperone_ClpB ATP-dependent chaperone ClpB Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PRK10787 DNA-binding ATP-dependent protease La; Provisional Back     alignment and domain information
>PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP Back     alignment and domain information
>PRK13947 shikimate kinase; Provisional Back     alignment and domain information
>KOG3354|consensus Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>PRK06305 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK08451 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins Back     alignment and domain information
>COG2255 RuvB Holliday junction resolvasome, helicase subunit [DNA replication, recombination, and repair] Back     alignment and domain information
>PF13173 AAA_14: AAA domain Back     alignment and domain information
>PRK14088 dnaA chromosomal replication initiation protein; Provisional Back     alignment and domain information
>KOG0734|consensus Back     alignment and domain information
>PRK15422 septal ring assembly protein ZapB; Provisional Back     alignment and domain information
>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK00625 shikimate kinase; Provisional Back     alignment and domain information
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>PRK13946 shikimate kinase; Provisional Back     alignment and domain information
>PLN02199 shikimate kinase Back     alignment and domain information
>PRK07952 DNA replication protein DnaC; Validated Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>KOG1029|consensus Back     alignment and domain information
>PRK05057 aroK shikimate kinase I; Reviewed Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PRK05707 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>COG0703 AroK Shikimate kinase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR02397 dnaX_nterm DNA polymerase III, subunit gamma and tau Back     alignment and domain information
>KOG0731|consensus Back     alignment and domain information
>CHL00181 cbbX CbbX; Provisional Back     alignment and domain information
>PRK13531 regulatory ATPase RavA; Provisional Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK14970 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>PLN02165 adenylate isopentenyltransferase Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>PRK00131 aroK shikimate kinase; Reviewed Back     alignment and domain information
>PRK03839 putative kinase; Provisional Back     alignment and domain information
>PTZ00202 tuzin; Provisional Back     alignment and domain information
>PF00025 Arf: ADP-ribosylation factor family The prints entry specific to Sar1 proteins The Prosite entry specific to Sar1 proteins; InterPro: IPR006689 Small GTPases form an independent superfamily within the larger class of regulatory GTP hydrolases Back     alignment and domain information
>cd01128 rho_factor Transcription termination factor rho is a bacterial ATP-dependent RNA/DNA helicase Back     alignment and domain information
>KOG0991|consensus Back     alignment and domain information
>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>PRK06217 hypothetical protein; Validated Back     alignment and domain information
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants Back     alignment and domain information
>CHL00206 ycf2 Ycf2; Provisional Back     alignment and domain information
>COG1219 ClpX ATP-dependent protease Clp, ATPase subunit [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14971 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>KOG0728|consensus Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>KOG0739|consensus Back     alignment and domain information
>PRK00149 dnaA chromosomal replication initiation protein; Reviewed Back     alignment and domain information
>COG2607 Predicted ATPase (AAA+ superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1637
3vkh_A3367 X-Ray Structure Of A Functional Full-Length Dynein 1e-130
3vkg_A3245 X-Ray Structure Of An Mtbd Truncation Mutant Of Dyn 1e-122
4ai6_A2695 Dynein Motor Domain - Adp Complex Length = 2695 3e-19
4ai6_A2695 Dynein Motor Domain - Adp Complex Length = 2695 4e-13
3qmz_A2486 Crystal Structure Of The Cytoplasmic Dynein Heavy C 2e-18
3qmz_A2486 Crystal Structure Of The Cytoplasmic Dynein Heavy C 2e-13
2rr7_A155 Microtubule Binding Domain Of Dynein-C Length = 155 6e-06
3err_A536 Microtubule Binding Domain From Mouse Cytoplasmic D 5e-05
3j1t_A164 High Affinity Dynein Microtubule Binding Domain - T 4e-04
>pdb|3VKH|A Chain A, X-Ray Structure Of A Functional Full-Length Dynein Motor Domain Length = 3367 Back     alignment and structure

Iteration: 1

Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust. Identities = 428/1745 (24%), Positives = 727/1745 (41%), Gaps = 319/1745 (18%) Query: 54 LVLFEDAMSHICRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYG 113 LVLF + + HI RI+R+ P+G+ALL+GV G GK LSR A+++ L + I++ NY Sbjct: 1625 LVLFNEVLDHILRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYK 1684 Query: 114 IPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIEN 173 D DL L +AG K I F+ +S V + FL +N +LA GEVP LF +E Sbjct: 1685 SSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTA 1744 Query: 174 IVN---NIAAEPEIPLTADLDPLTMLTD----DATIAFWNNEGLPN--DRMSTE----NA 220 +++ A + L ++ + T + + F N P+ +R +T N Sbjct: 1745 LMHACKETAQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNR 1804 Query: 221 TILVNSQRW--------------------------PLMIDPQEVL-----------RKPC 243 +L W P+ I E++ R Sbjct: 1805 CVLDWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMGNNLMAIPPSHRDAV 1864 Query: 244 AVFMAYVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQN 303 + Y+H ++ + ++ L + R NY TP+ +L+ I+ L+ K D + Sbjct: 1865 VSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNI 1924 Query: 304 GLQKL-----------VSLGNEEKKVRAIEEDVSYK------------------------ 328 GL+KL VSL + +++ E + K Sbjct: 1925 GLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQKDARELQVQ 1984 Query: 329 ----------QKVCA-EDLEKAEPALVAAQEALDTLDKNNLTELKALKAPPQGVIAVCDA 377 QKV A DLEKAEPA++ AQEA+ T+ K +L E+K+L PP V +A Sbjct: 1985 LDVRNKEIAVQKVKAYADLEKAEPAIIEAQEAVSTIKKKHLDEIKSLPKPPTPVKLAMEA 2044 Query: 378 VAVLMA--------------------------SKKGKVPK-----------DLGWKGSQL 400 V +++ +KK PK D G+ + Sbjct: 2045 VCLMLGGKKLEWADIRKKIMEPNFITSIINYDTKKMMTPKIREAITKGYLEDPGFDYETV 2104 Query: 401 KALKAPPQGLCAWVINIITFYNVWTFVEPKRXXXXXXXXXXXXXXXXXXXXXXXIASLEA 460 L W + + ++P R I +LE Sbjct: 2105 NRASKACGPLVKWATAQTYYSEILDRIKPLREEVEQLENAANELKLKQDEIVATITALEK 2164 Query: 461 TLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRLVNGLASENVRWKDSVLGLQQSALT 520 ++ +++ ++E + ++ + K+D + L++ L SE RW+ T Sbjct: 2165 SIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLDNLNSERGRWEQQSENFNTQMST 2224 Query: 521 LPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKIDW--------FHEWPQEAL- 571 + GD++L +AF++Y+G F +++R DL+ K W+ + I + F P+E L Sbjct: 2225 VVGDVVLASAFLAYIGFFDQNFRTDLMRK-WMIRLDSVGIKFKSDLSVPSFLSKPEERLN 2283 Query: 572 --------ESVSLKFLVKSCESHRY-------------------GNKLTVIRLGQKRVMD 604 + + ++ + +RY K+T M Sbjct: 2284 WHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFLDSSFMK 2343 Query: 605 QIEKAVMSGFVLLIENIGESVDPVLDNLIGRNLIRKGK--VVKIGEKEIDYNPNFKLILH 662 +E A+ G LL++++ E++DPVL+ ++ + + +KG ++++G++++D++P+F + L Sbjct: 2344 NLESALRFGCPLLVQDV-ENIDPVLNPVLNKEIRKKGGRILIRLGDQDVDFSPSFMIFLF 2402 Query: 663 TKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEVVKFERPDLELLKANLTKEQNLFKI 722 T+ H+ P++ ++ T +NFTVT L+ Q L E +K ERPD +++L K Q F++ Sbjct: 2403 TRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQV 2462 Query: 723 TLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAXXXXXXXXXXXXTAKKIDEAREQ 782 L+ LE LL LS + G++L D +++ LE KK ++I E Sbjct: 2463 KLRILEKSLLNALSQASGNILDDDSVISTLETLKKETTEIALKVEETETVMQEISEVSAL 2522 Query: 783 YRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKSDNLKG---RVANLV 839 Y P A S +YF M EL + + +YQFSL+AF +F+N + + K R+ L Sbjct: 2523 YNPMALSCSRVYFAMEELSQFH-LYQFSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLS 2581 Query: 840 ESITFMTFQYTSRGLFERDKLIFMAQMTIQVKSLCMGDQHYHVLQQPKRXXXXXXXXXXX 899 + I MTF +R L DKL F Q+TI Sbjct: 2582 KDIFSMTFNRVTRTLLNDDKLTFALQLTI------------------------------- 2610 Query: 900 XXXXXXXXXXXXIAISMMKKEIAREELDFLLR-----FPFQPGVSSPVDFLTNTLWGGVR 954 I++ EI E DFLL+ + + L+ T + Sbjct: 2611 ------------ISVKGTSNEIEESEWDFLLKGGDNLTSIKETIPQLDSLLSTTQQKWLI 2658 Query: 955 AL-SNLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEW-------KNK-----SALQ 1001 L + F L I+ + WK++ + + +P+ W N+ S + Sbjct: 2659 CLRQQVPSFSKLVDHIQQNSSDWKQFFGKDQVGEPIIPESWIVAQAQLSNQQSTIVSNFR 2718 Query: 1002 RLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSY-RESSSTTPIFFILSPGVD 1060 ++ +M+ DR+ SFV G+ ++N + ++ +E S++P+ PG D Sbjct: 2719 KILLMKAFHSDRVLQYSHSFVCSVFGEDFLNTQELDMANIVEKEVKSSSPLLLCSVPGYD 2778 Query: 1061 PTRDVEAVGRKMGFTTDLRNLHNVSLG--QGQEVIAEETIQIASTKGHWAILQNVHLVKN 1118 + V+ + ++ + + ++G +G E +AE++I A+ G W +L+N+HL Sbjct: 2779 ASSKVDDLALQLH-----KQYKSFAIGSPEGFE-LAEKSIYAAAKSGTWVLLKNIHLAPQ 2832 Query: 1119 WLPTLDKKMEASFEKPHKNYRLFISAE--PASDPEYHIIPQGVLDSSIKITNEPPTGMQA 1176 WL L+KK+ + PH ++RLF+++E PA +P +L S + E P G++A Sbjct: 2833 WLVQLEKKLHSL--SPHPSFRLFMTSEIHPA-------LPANLLRMSNVFSYENPPGVKA 2883 Query: 1177 NLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGDL- 1235 NL M + AE I F L +FHA++ ER ++ P GW + + FN DL Sbjct: 2884 NLLHTFIGIPAT--RMDKQPAERSRIYFLLAWFHAIIQERLRYIPLGWTKFFEFNDADLR 2941 Query: 1236 ----TISSLV-LYNYLEAN---NNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYM 1287 +I V LY+ +N + +PW +R + G +YGG I +++D RL ++LE+ Sbjct: 2942 GALDSIDYWVDLYSKGRSNIDPDKIPWIAVRTILGSTIYGGRIDNEFDMRLLYSFLEQLF 3001 Query: 1288 NPELLEGETKLAP--GFPAPPNQDYQGYHTYIDESLPP-ESPILYGLHPNAEIGFLTTQA 1344 P + L P G P + +I E+LP +PI GL NAE L+ +A Sbjct: 3002 TPSAFNPDFPLVPSIGLSVPEGTTRAHFMKWI-EALPEISTPIWLGLPENAESLLLSNKA 3060 Query: 1345 ENVFKIIFELQPRDTAAAQGSG-----------------VTREEKVRQVLDEILDKCPDA 1387 K+I +LQ ++ G + K+R + E P Sbjct: 3061 R---KMINDLQKMQSSEEDGEDDQVSGSSKKESSSSSSEDKGKAKLRATITEWTKLLPKP 3117 Query: 1388 F--------NIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSXXXXXXXXXXXXTIT 1439 NIKD + R +R E L+ +I T Sbjct: 3118 LKQLKRTTQNIKDPLFRCFER---------EISTGGKLVKKITNDLANLLELISGNIKST 3168 Query: 1440 TDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDFQLPS-SVWL 1498 + +L SI VP W+ + P + L W +D R+++L S VWL Sbjct: 3169 NYLRSLTTSISKGIVPKEWKWYSVPETISLSVWISDFSKRMQQLSEISESSDYSSIQVWL 3228 Query: 1499 AGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQREDFTQAPRDGAYVN--GLYME 1556 G NP++++TA QS ++ N W L+ + L K + GA N G+ +E Sbjct: 3229 GGLLNPEAYITATRQSASQLNGWSLENLRLHASSLGK------ISSEGGASFNVKGMALE 3282 Query: 1557 GARWD 1561 GA W+ Sbjct: 3283 GAVWN 3287
>pdb|3VKG|A Chain A, X-Ray Structure Of An Mtbd Truncation Mutant Of Dynein Motor Domain Length = 3245 Back     alignment and structure
>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695 Back     alignment and structure
>pdb|4AI6|A Chain A, Dynein Motor Domain - Adp Complex Length = 2695 Back     alignment and structure
>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486 Back     alignment and structure
>pdb|3QMZ|A Chain A, Crystal Structure Of The Cytoplasmic Dynein Heavy Chain Motor Domain Length = 2486 Back     alignment and structure
>pdb|2RR7|A Chain A, Microtubule Binding Domain Of Dynein-C Length = 155 Back     alignment and structure
>pdb|3ERR|A Chain A, Microtubule Binding Domain From Mouse Cytoplasmic Dynein As A Fusion With Seryl-Trna Synthetase Length = 536 Back     alignment and structure
>pdb|3J1T|A Chain A, High Affinity Dynein Microtubule Binding Domain - Tubulin Complex Length = 164 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1637
3vkg_A3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 0.0
4akg_A2695 Glutathione S-transferase class-MU 26 kDa isozyme 0.0
4akg_A2695 Glutathione S-transferase class-MU 26 kDa isozyme 6e-71
4akg_A2695 Glutathione S-transferase class-MU 26 kDa isozyme 6e-17
4akg_A2695 Glutathione S-transferase class-MU 26 kDa isozyme 4e-04
2rr7_A155 Dynein heavy chain 9; microtubule-binding, stalk h 7e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-16
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
3err_A536 Fusion protein of microtubule binding domain from 9e-04
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C* Length = 3245 Back     alignment and structure
 Score = 1546 bits (4003), Expect = 0.0
 Identities = 387/1781 (21%), Positives = 718/1781 (40%), Gaps = 272/1781 (15%)

Query: 5    EYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHI 64
            + + +P++Y +++       Y  + + + L + +   +  + E    + LVLF + + HI
Sbjct: 1581 DALKRPILYSNWL----TKDYQPV-NRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHI 1635

Query: 65   CRINRIMEAPRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASL 124
             RI+R+   P+G+ALL+GV G GK  LSR  A+++ L  + I++  NY   D   DL  L
Sbjct: 1636 LRIDRVFRQPQGHALLIGVSGGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRML 1695

Query: 125  YLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPDLFTDDEIENIVNNIAAEPEI 184
              +AG K   I F+  +S V +  FL  +N +LA GEVP LF  +E   +++        
Sbjct: 1696 LKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPGLFEGEEFTALMHACKET--- 1752

Query: 185  PLTADLDPLTMLTDDATIAF---------------------------------------- 204
               A  + L + +++    +                                        
Sbjct: 1753 ---AQRNGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVLDW 1809

Query: 205  ---WNNEGL-------------PNDRMSTENATILVNSQRWPLMIDPQEVLRKPCAVFMA 248
               W+ E L              N +       I         ++      R      + 
Sbjct: 1810 FGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMGNNLMAIPPSHRDAVVSSLV 1869

Query: 249  YVHSSVNQISVSYLLNERRYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKL 308
            Y+H ++ + ++  L  + R NY TP+ +L+ I+    L+  K D  +        GL+KL
Sbjct: 1870 YIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKL 1929

Query: 309  VSLGNEEKKVRAIEEDVSYKQKVCAEDLEKAEPALVAAQEALDTLDKNNLTELKALKAPP 368
                  E +V+ ++             L +    L    E  +   K  + + +A +   
Sbjct: 1930 RD---TEAQVKDLQ-----------VSLAQKNRELDVKNEQANQKLKQMVQDQQAAEIKQ 1975

Query: 369  QGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVINIITFYNVWTF-- 426
            +    +   + V                           +     V  +  + ++     
Sbjct: 1976 KDARELQVQLDV---------------------------RNKEIAVQKVKAYADLEKAEP 2008

Query: 427  VEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEEC 486
              P R+ +            K  E+ A I +LE ++    +++   ++E    + ++ + 
Sbjct: 2009 TGPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKV 2068

Query: 487  AEKIDLADRLVNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDL 546
              K+D +  L++ L SE  RW+           T+ GD++L +AF++Y+G F +++R DL
Sbjct: 2069 KNKVDRSIALLDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDL 2128

Query: 547  LNKFWLPTIKKSKI---------------DWFHEWPQEAL--ESVSLKFLVKSCESHRY- 588
            + K W+  +    I               +    W   +L  + + ++  +     +RY 
Sbjct: 2129 MRK-WMIRLDSVGIKFKSDLSVPSFLSKPEERLNWHANSLPSDELCIENAIMLKRFNRYP 2187

Query: 589  ------------------GNKLTVIRLGQKRVMDQIEKAVMSGFVLLIENIGESVDPVLD 630
                                K+T         M  +E A+  G  LL++++ E++DPVL+
Sbjct: 2188 LVIDPSGQAMEFLMNQYADKKITKTSFLDSSFMKNLESALRFGCPLLVQDV-ENIDPVLN 2246

Query: 631  NLIGRNLIRKG--KVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRD 688
             ++ + + +KG   ++++G++++D++P+F + L T+    H+ P++ ++ T +NFTVT  
Sbjct: 2247 PVLNKEIRKKGGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPS 2306

Query: 689  GLEDQLLAEVVKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNL 748
             L+ Q L E +K ERPD    +++L K Q  F++ L+ LE  LL  LS + G++L D ++
Sbjct: 2307 SLQSQCLHEALKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNILDDDSV 2366

Query: 749  VLNLEKSKKTAKEIEIKVKEGKKTAKKIDEAREQYRPAAERASVIYFIMNELFKINPIYQ 808
            +  LE  KK   EI +KV+E +   ++I E    Y P A   S +YF M EL + + +YQ
Sbjct: 2367 ISTLETLKKETTEIALKVEETETVMQEISEVSALYNPMALSCSRVYFAMEELSQFH-LYQ 2425

Query: 809  FSLKAFTVVFHNAMTKAKK---SDNLKGRVANLVESITFMTFQYTSRGLFERDKLIFMAQ 865
            FSL+AF  +F+N +          +   R+  L + I  MTF   +R L   DKL F  Q
Sbjct: 2426 FSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLSKDIFSMTFNRVTRTLLNDDKLTFALQ 2485

Query: 866  MTIQVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREE 925
            +TI                                           I++     EI   E
Sbjct: 2486 LTI-------------------------------------------ISVKGTSNEIEESE 2502

Query: 926  LDFLLR-----FPFQPGVSSPVDFLTNTLWG-GVRALSNLEEFKNLDKDIEAAAKRWKKY 979
             DFLL+        +  +      L+ T     +     +  F  L   I+  +  WK++
Sbjct: 2503 WDFLLKGGDNLTSIKETIPQLDSLLSTTQQKWLICLRQQVPSFSKLVDHIQQNSSDWKQF 2562

Query: 980  IEGETPEKDKLPQEW------------KNKSALQRLCIMRCLRPDRMTYAVRSFVEEKMG 1027
               +   +  +P+ W               S  +++ +M+    DR+     SFV    G
Sbjct: 2563 FGKDQVGEPIIPESWIVAQAQLSNQQSTIVSNFRKILLMKAFHSDRVLQYSHSFVCSVFG 2622

Query: 1028 DRYVNARAIEFEQSY-RESSSTTPIFFILSPGVDPTRDVEAVGRKMGFTTDLRNLHNVSL 1086
            + ++N + ++      +E  S++P+     PG D +  V+ +  ++      +   + ++
Sbjct: 2623 EDFLNTQELDMANIVEKEVKSSSPLLLCSVPGYDASSKVDDLALQLH-----KQYKSFAI 2677

Query: 1087 GQGQEV-IAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAE 1145
            G  +   +AE++I  A+  G W +L+N+HL   WL  L+KK+ +    PH ++RLF+++E
Sbjct: 2678 GSPEGFELAEKSIYAAAKSGTWVLLKNIHLAPQWLVQLEKKLHS--LSPHPSFRLFMTSE 2735

Query: 1146 PASDPEYHIIPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFA 1205
                     +P  +L  S   + E P G++ANL             M  + AE   I F 
Sbjct: 2736 IHPA-----LPANLLRMSNVFSYENPPGVKANLLHTFIGIPATR--MDKQPAERSRIYFL 2788

Query: 1206 LCYFHAVVAERRKFGPQGWNRSYPFNVGDLTISSLVLYNYLE---------ANNNVPWED 1256
            L +FHA++ ER ++ P GW + + FN  DL  +   +  +++           + +PW  
Sbjct: 2789 LAWFHAIIQERLRYIPLGWTKFFEFNDADLRGALDSIDYWVDLYSKGRSNIDPDKIPWIA 2848

Query: 1257 LRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAP--GFPAPPNQDYQGYH 1314
            +R + G  +YGG I +++D RL  ++LE+   P     +  L P  G   P       + 
Sbjct: 2849 VRTILGSTIYGGRIDNEFDMRLLYSFLEQLFTPSAFNPDFPLVPSIGLSVPEGTTRAHFM 2908

Query: 1315 TYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDTAAAQGSGV------- 1367
             +I+      +PI  GL  NAE   L+ +A  +   + ++Q  +                
Sbjct: 2909 KWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQKMQSSEEDGEDDQVSGSSKKES 2968

Query: 1368 -------TREEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSE 1420
                     + K+R  + E     P              + P      +E      L+ +
Sbjct: 2969 SSSSSEDKGKAKLRATITEWTKLLPKPLKQLKRTT-QNIKDPLFRCFEREISTGGKLVKK 3027

Query: 1421 IKRSLKELNLGLKGELTITTDMEALEYSIFMDTVPPSWEKRAYPSMLGLGGWFADLMLRL 1480
            I   L  L   + G +  T  + +L  SI    VP  W+  + P  + L  W +D   R+
Sbjct: 3028 ITNDLANLLELISGNIKSTNYLRSLTTSISKGIVPKEWKWYSVPETISLSVWISDFSKRM 3087

Query: 1481 KELENWVGDFQL-PSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCLQCDVTKKQRED 1539
            ++L             VWL G  NP++++TA  QS ++ N W L+ + L      K   +
Sbjct: 3088 QQLSEISESSDYSSIQVWLGGLLNPEAYITATRQSASQLNGWSLENLRLHASSLGKISSE 3147

Query: 1540 FTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDK---QDLRN 1596
                      V G+ +EGA W+      +D     L   + +  +    +D     +  +
Sbjct: 3148 ----GGASFNVKGMALEGAVWNNDQLTPTDI----LSTPISIATLTWKDKDDPIFNNSSS 3199

Query: 1597 MYECPVYKTRQRGPNYVWTFNLKTKEK--PAKWTMAGVALL 1635
                PVY    R    +++ +L   +      W    V++ 
Sbjct: 3200 KLSVPVYLNETRS-ELLFSIDLPYDQSTSKQNWYQRSVSIS 3239


>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Length = 2695 Back     alignment and structure
>2rr7_A Dynein heavy chain 9; microtubule-binding, stalk head, MTBD, antiparallel coil, motor protein, DSH; NMR {Chlamydomonas reinhardtii} Length = 155 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} Length = 536 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1637
3vkg_A3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 100.0
4akg_A2695 Glutathione S-transferase class-MU 26 kDa isozyme 100.0
2rr7_A155 Dynein heavy chain 9; microtubule-binding, stalk h 99.83
3err_A536 Fusion protein of microtubule binding domain from 99.82
2p65_A187 Hypothetical protein PF08_0063; CLPB, malaria, str 96.72
1jbk_A195 CLPB protein; beta barrel, chaperone; 1.80A {Esche 96.68
1d2n_A272 N-ethylmaleimide-sensitive fusion protein; hexamer 96.65
2qz4_A262 Paraplegin; AAA+, SPG7, protease, ADP, structural 96.21
4b4t_J405 26S protease regulatory subunit 8 homolog; hydrola 96.12
2chg_A226 Replication factor C small subunit; DNA-binding pr 95.96
3pvs_A447 Replication-associated recombination protein A; ma 95.96
3h4m_A285 Proteasome-activating nucleotidase; ATPase, PAN, A 95.9
4b4t_L437 26S protease subunit RPT4; hydrolase, AAA-atpases, 95.77
3pxg_A468 Negative regulator of genetic competence CLPC/MEC; 95.72
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 95.71
1lv7_A257 FTSH; alpha/beta domain, four helix bundle, hydrol 95.69
3pfi_A338 Holliday junction ATP-dependent DNA helicase RUVB; 95.68
3b9p_A297 CG5977-PA, isoform A; AAA ATPase, ATP-binding, nuc 95.58
4b4t_I437 26S protease regulatory subunit 4 homolog; hydrola 95.5
3eie_A322 Vacuolar protein sorting-associated protein 4; AAA 95.49
4b4t_M434 26S protease regulatory subunit 6A; hydrolase, AAA 95.46
4b4t_K428 26S protease regulatory subunit 6B homolog; hydrol 95.46
3d8b_A357 Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, s 95.44
3syl_A309 Protein CBBX; photosynthesis, rubisco activase, AA 95.43
3vfd_A389 Spastin; ATPase, microtubule severing, hydrolase; 95.42
3uk6_A368 RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding 95.26
4b4t_H467 26S protease regulatory subunit 7 homolog; hydrola 95.25
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 95.18
2x8a_A274 Nuclear valosin-containing protein-like; nuclear p 95.16
3n70_A145 Transport activator; sigma-54, ntpase, PSI, MCSG, 95.12
3vkg_A 3245 Dynein heavy chain, cytoplasmic; AAA+ protein, mol 95.1
1um8_A376 ATP-dependent CLP protease ATP-binding subunit CL; 95.03
2qp9_X355 Vacuolar protein sorting-associated protein 4; ATP 95.0
1xwi_A322 SKD1 protein; VPS4B, AAA ATPase, protein transport 94.86
1sxj_A516 Activator 1 95 kDa subunit; clamp loader, processi 94.73
2v1u_A387 Cell division control protein 6 homolog; DNA repli 94.7
2chq_A319 Replication factor C small subunit; DNA-binding pr 94.68
3t15_A293 Ribulose bisphosphate carboxylase/oxygenase activ 94.66
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 94.63
4fcw_A311 Chaperone protein CLPB; AAA domain; HET: ADP; 2.35 94.55
3u61_B324 DNA polymerase accessory protein 44; AAA+, ATP hyd 94.55
2ce7_A476 Cell division protein FTSH; metalloprotease; HET: 94.49
3hws_A363 ATP-dependent CLP protease ATP-binding subunit CL; 94.4
1ofh_A310 ATP-dependent HSL protease ATP-binding subunit HSL 94.38
1r6b_X758 CLPA protein; AAA+, N-terminal domain, CLPS, cryst 94.3
3cf0_A301 Transitional endoplasmic reticulum ATPase; AAA, P9 94.29
3pxi_A758 Negative regulator of genetic competence CLPC/MEC; 94.27
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 94.27
1l8q_A324 Chromosomal replication initiator protein DNAA; AA 94.25
2c9o_A456 RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP- 94.25
1njg_A250 DNA polymerase III subunit gamma; rossman-like fol 94.21
3hu3_A489 Transitional endoplasmic reticulum ATPase; VCP, tr 93.91
1ixz_A254 ATP-dependent metalloprotease FTSH; AAA domain fol 93.88
3co5_A143 Putative two-component system transcriptional RES 93.81
1hqc_A324 RUVB; extended AAA-ATPase domain, complex with nuc 93.75
1iqp_A327 RFCS; clamp loader, extended AAA-ATPase domain, co 93.62
2z4s_A440 Chromosomal replication initiator protein DNAA; AA 93.62
1iy2_A278 ATP-dependent metalloprotease FTSH; AAA domain fol 93.46
2qby_A386 CDC6 homolog 1, cell division control protein 6 ho 93.31
1sxj_B323 Activator 1 37 kDa subunit; clamp loader, processi 93.28
2zan_A444 Vacuolar protein sorting-associating protein 4B; S 93.1
2dhr_A499 FTSH; AAA+ protein, hexameric Zn metalloprotease, 92.98
3te6_A318 Regulatory protein SIR3; heterochromatin, gene sil 92.95
2bjv_A265 PSP operon transcriptional activator; AAA, transcr 92.93
3bos_A242 Putative DNA replication factor; P-loop containing 92.83
2r62_A268 Cell division protease FTSH homolog; ATPase domain 92.77
1sxj_D353 Activator 1 41 kDa subunit; clamp loader, processi 92.72
1fnn_A389 CDC6P, cell division control protein 6; ORC1, AAA 92.66
3ec2_A180 DNA replication protein DNAC; helicase loader, rep 92.51
2kjq_A149 DNAA-related protein; solution structure, NESG, st 92.47
1sxj_C340 Activator 1 40 kDa subunit; clamp loader, processi 92.23
1jr3_A373 DNA polymerase III subunit gamma; processivity, pr 92.19
1qvr_A854 CLPB protein; coiled coil, AAA ATPase, chaperone; 91.8
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 91.4
2r44_A331 Uncharacterized protein; putative ATPase, structur 91.2
4akg_A 2695 Glutathione S-transferase class-MU 26 kDa isozyme 91.11
2qby_B384 CDC6 homolog 3, cell division control protein 6 ho 90.33
1in4_A334 RUVB, holliday junction DNA helicase RUVB; AAA+-cl 90.15
1ypw_A806 Transitional endoplasmic reticulum ATPase; AAA, P9 90.06
3cf2_A806 TER ATPase, transitional endoplasmic reticulum ATP 90.02
3m6a_A543 ATP-dependent protease LA 1; alpha, beta, ATP-bind 89.62
1g41_A444 Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dep 89.53
2ze6_A253 Isopentenyl transferase; crown GALL tumor, cytokin 89.47
2gno_A305 DNA polymerase III, gamma subunit-related protein; 89.37
1a5t_A334 Delta prime, HOLB; zinc finger, DNA replication; 2 89.22
1ic2_A81 Tropomyosin alpha chain, skeletal muscle; alpha-he 89.11
4gkw_A167 Spindle assembly abnormal protein 6; double helix, 88.91
1w5s_A412 Origin recognition complex subunit 2 ORC2; replica 88.79
1sxj_E354 Activator 1 40 kDa subunit; clamp loader, processi 88.77
1g8p_A350 Magnesium-chelatase 38 kDa subunit; parallel beta 88.42
2w58_A202 DNAI, primosome component (helicase loader); ATP-b 88.27
1ojl_A304 Transcriptional regulatory protein ZRAR; response 88.18
1ic2_A81 Tropomyosin alpha chain, skeletal muscle; alpha-he 87.72
2jee_A81 YIIU; FTSZ, septum, coiled-coil, cell division, ce 87.64
3crm_A323 TRNA delta(2)-isopentenylpyrophosphate transferase 87.63
3nbx_X500 ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structu 87.07
2eqb_B97 RAB guanine nucleotide exchange factor SEC2; coile 87.06
2qen_A350 Walker-type ATPase; unknown function; HET: ADP; 2. 86.29
3vaa_A199 Shikimate kinase, SK; structural genomics, center 85.46
2fna_A357 Conserved hypothetical protein; structural genomic 84.59
2fxo_A129 Myosin heavy chain, cardiac muscle beta isoform; c 84.19
3foz_A316 TRNA delta(2)-isopentenylpyrophosphate transferas; 83.99
3hnw_A138 Uncharacterized protein; coiled-coil, structural g 83.73
3bas_A89 Myosin heavy chain, striated muscle/general contro 82.84
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 82.76
2orw_A184 Thymidine kinase; TMTK, TP4A, transferase; HET: 4T 82.7
3trf_A185 Shikimate kinase, SK; amino acid biosynthesis, tra 82.33
1knq_A175 Gluconate kinase; ALFA/beta structure, transferase 81.77
3u1c_A101 Tropomyosin alpha-1 chain; anti-parallel coiled co 81.12
3u1c_A101 Tropomyosin alpha-1 chain; anti-parallel coiled co 81.0
3a8t_A339 Adenylate isopentenyltransferase; rossmann fold pr 80.72
2ga8_A359 Hypothetical 39.9 kDa protein; YFR007W, YFH7, unkn 80.71
1kag_A173 SKI, shikimate kinase I; transferase, structural g 80.52
3exa_A322 TRNA delta(2)-isopentenylpyrophosphate transferase 80.25
1odf_A290 YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser 80.18
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
Probab=100.00  E-value=2e-288  Score=2999.71  Aligned_cols=1499  Identities=26%  Similarity=0.474  Sum_probs=1225.4

Q ss_pred             ccccCCceeeecccCCCCCccccCCChHHHHHHHHHHHHhHHHHHHHhhhhhhhhhhhhhhhhhhhhcCCCCceEEEeec
Q psy2649           5 EYMDKPLIYCHFVECVGDPKYMKMPDWATLHKILSETMTSYNEIVASMNLVLFEDAMSHICRINRIMEAPRGNALLVGVG   84 (1637)
Q Consensus         5 ~~~~~~~~f~~f~~~~~~~~Y~~v~~~~~l~~~l~~~l~~yn~~~~~~~lvlf~~~i~hi~ri~RvL~~p~gh~lLvG~~   84 (1637)
                      ..+.+|++||||+++    .|++| +.++|+++++++|++||+++.+|+||||++|++||+||+|||+||+||+||||+|
T Consensus      1581 ~~~~~pllf~~f~~~----~Y~~v-~~~~l~~~l~~~L~~yn~~~~~m~LVlF~daleHv~RI~RIL~qp~GhaLLVGvg 1655 (3245)
T 3vkg_A         1581 DALKRPILYSNWLTK----DYQPV-NRSDLREYVKARLKVFYEEELDVPLVLFNEVLDHILRIDRVFRQPQGHALLIGVS 1655 (3245)
T ss_dssp             GGGCSSCCCCSSCC--------CC-CHHHHHHHHHHHHHTTC------CCCCCHHHHHHHHHHHHHHTSTTCCEEEEEST
T ss_pred             hhcccCcchhhhccc----cCccC-CHHHHHHHHHHHHHHHHhcccCceEEeHHHHHHHHHHHHHHHccCCCCeEEecCC
Confidence            456789999999873    69999 7899999999999999999999999999999999999999999999999999999


Q ss_pred             CCchhhHHhHHHhhccccceEEEeccccCcchhhhHHHHHHHHhhcccccEEEEeccccccccceeeeehhhhccCCCCC
Q psy2649          85 GSGKQSLSRLSAFISTLEPFQIQLKKNYGIPDLKIDLASLYLKAGLKNAGIMFLMTDSQVADEKFLVIINDMLASGEVPD  164 (1637)
Q Consensus        85 GsGr~sl~rlaa~~~~~~~~~i~~~~~y~~~~f~~dLk~~~~~ag~~~~~~v~l~~d~~i~~~~fle~in~lL~~gevp~  164 (1637)
                      ||||+|||||||||+|+++|||.++++|+..+|++|||.+|++||++|+++||||+|+||.+++|||+||+||++|||||
T Consensus      1656 GSGkqSLtrLAa~i~~~~vfqi~i~k~Y~~~~f~eDLk~l~~~aG~~~~~~vFL~tD~qi~~e~FLE~IN~lL~sGEVP~ 1735 (3245)
T 3vkg_A         1656 GGGKSVLSRFVAWMNGLSIYTIKVNNNYKSSDFDDDLRMLLKRAGCKEEKICFIFDESNVLESSFLERMNTLLAGGEVPG 1735 (3245)
T ss_dssp             TSSHHHHHHHHHHHTTCEEECCC----CCHHHHHHHHHHHHHHHHTSCCCEEEEEEGGGCSSTHHHHHHHHHHHHSCCTT
T ss_pred             CCcHHHHHHHHHHHhCCeeEEEeeeCCCCHHHHHHHHHHHHHHHhcCCCCEEEEEeccccccHHHHHHHHHHhccCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHHHHhhhcCCCccccCCCCccccc--chhhHHHHhhccC---C-CccccccCcceeEecccccccccC----
Q psy2649         165 LFTDDEIENIVNNIAAEPEIPLTADLDPLTML--TDDATIAFWNNEG---L-PNDRMSTENATILVNSQRWPLMID----  234 (1637)
Q Consensus       165 Lf~~ee~~~i~~~~~~~~~~~~~~~l~~~~~~--s~~~~~~~f~~~v---L-~v~~~s~~~~~~~~~~~~~P~l~~----  234 (1637)
                      ||+.||+++|++.+|+.++.        .|..  |++++|+||++||   | ||+||||.|+.||.||++||+|+|    
T Consensus      1736 LF~~dE~~~i~~~~r~~a~~--------~g~~~dt~~~l~~~Fi~rvr~NLHvVL~mSPvg~~fR~R~r~fPaLvncctI 1807 (3245)
T 3vkg_A         1736 LFEGEEFTALMHACKETAQR--------NGLILDSEEELYKYFTSQVRRNLHVVFTMNPASPDFHNRSATSPALFNRCVL 1807 (3245)
T ss_dssp             SSCTTTHHHHHHHHHHHHHH--------TTCCCCCHHHHHHHHHHHHTTTCCEEEEECTTSTTTTC----CTHHHHHSEE
T ss_pred             cCCHHHHHHHHHHHHHHHHh--------cCCCCCCHHHHHHHHHHHHHHcCEEEEEECCCCHHHHHHHHHChHHhhCcee
Confidence            99999999999999988766        4432  8899999999999   8 999999999999999999999999    


Q ss_pred             ------hhhhh------------------------------------------hchHHHHHHHHhhhHhhhhHHHhhccc
Q psy2649         235 ------PQEVL------------------------------------------RKPCAVFMAYVHSSVNQISVSYLLNER  266 (1637)
Q Consensus       235 ------p~~al------------------------------------------~~~~~~~~~~~h~~~~~~~~~~~~~~~  266 (1637)
                            |++|+                                          ++.++.+|+.+|.++.+++.+|+++.+
T Consensus      1808 DWf~~Wp~eAL~~Va~~fl~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~sv~~~s~~~~~~~~ 1887 (3245)
T 3vkg_A         1808 DWFGEWSPEALFQVGSEFTRNLDLENPQYIAPPVFIQEAEIMGNNLMAIPPSHRDAVVSSLVYIHQTIGEANIRLLKRQG 1887 (3245)
T ss_dssp             EEEESCCHHHHHHHHHHHTTTSCCCCTTCCCCHHHHHHHHC----CCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             eecCCCCHHHHHHHHHHHHhhcccccccccccccccchhccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence                  67663                                          345678899999999999999999999


Q ss_pred             cccCCCchhHHHHHHHHHHHHhhhhhhhhhhhhhhhhhHHHhhhchhhh----hhHHHhHHhhhhhhhhhHHhhhhhcch
Q psy2649         267 RYNYTTPKSFLEQIDLYAKLLKIKFDDNKSGITRFQNGLQKLVSLGNEE----KKVRAIEEDVSYKQKVCAEDLEKAEPA  342 (1637)
Q Consensus       267 r~~~~TP~~fl~~l~~f~~l~~~k~~~l~~~~~~l~~gL~kL~e~~~ee----~k~~~~~~e~~~~~~~~~~~L~~a~P~  342 (1637)
                      |++|+||++|++||++|+++|.+|++++..+++||++||+||.+|.++-    +++++.+.+++++++++++-|.+..-.
T Consensus      1888 R~~yvTP~syLeli~~y~~ll~~K~~el~~~~~rl~~GL~KL~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i~~~ 1967 (3245)
T 3vkg_A         1888 RQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQMVQD 1967 (3245)
T ss_dssp             CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999983322    122222333333333333322222211


Q ss_pred             HHHHHH---HhhhhccC---ChhhhhccCCCcchhhhhhheeeeeeccCCCCCCCcCccchhhhccccCCcCcchhhhhh
Q psy2649         343 LVAAQE---ALDTLDKN---NLTELKALKAPPQGVIAVCDAVAVLMASKKGKVPKDLGWKGSQLKALKAPPQGLCAWVIN  416 (1637)
Q Consensus       343 l~~A~~---al~~l~k~---dl~Eirs~~~PP~~V~~v~eaV~~Ll~~~~~~~~~~~~W~~~k~~~i~~~a~~L~~WV~A  416 (1637)
                      -++|.+   .+..+.+.   .-.|+..       .+...|                     ..+..+ .||         
T Consensus      1968 ~~~ae~~k~~v~~~~~~~~~~~~ei~~-------~k~~~e---------------------~dL~~A-~Pa--------- 2009 (3245)
T 3vkg_A         1968 QQAAEIKQKDARELQVQLDVRNKEIAV-------QKVKAY---------------------ADLEKA-EPT--------- 2009 (3245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH---------------------HCC----------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH---------------------HHHhhc-CCC---------
Confidence            111111   00000000   0000000       000000                     001111 123         


Q ss_pred             heeeeEEEEecchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHh
Q psy2649         417 IITFYNVWTFVEPKRKALAAANAELAAASQKLAELKAKIASLEATLQELTDKFDAAVKEKLFCQNQAEECAEKIDLADRL  496 (1637)
Q Consensus       417 i~~Y~~v~~~v~P~~~~l~~~e~~l~~~~~~l~~~~~~l~~le~~l~~l~~~~~~~~~e~~~l~~~~~~~~~rl~ra~~L  496 (1637)
                                 +|||++++++++++++++++|++++++|++++++|++|+++|+++++|+++|+.+++.|+.||+||++|
T Consensus      2010 -----------~Pkr~~l~~ae~~l~~~~~~L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~~~~kl~rA~~L 2078 (3245)
T 3vkg_A         2010 -----------GPLREEVEQLENAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIAL 2078 (3245)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                       999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccccccchHHHHHHHhhccccCCcceeeehhhhhhhcchhhhHHHHhhhccccccccccCCC---------------
Q psy2649         497 VNGLASENVRWKDSVLGLQQSALTLPGDILLVTAFVSYVGCFTRSYRLDLLNKFWLPTIKKSKID---------------  561 (1637)
Q Consensus       497 i~~L~~E~~rW~~~~~~l~~~~~~l~gd~lL~aa~i~Y~G~~~~~~R~~ll~~~w~~~l~~~~id---------------  561 (1637)
                      |++|++|+.||++++++++.+..+|+|||||||||++|+|||+.+||+.++.. |...|++.+|.               
T Consensus      2079 i~gL~~Ek~RW~~~~~~l~~~~~~L~GD~LLaaafisY~G~f~~~~R~~l~~~-W~~~l~~~~Ip~s~~~~l~~~L~~~~ 2157 (3245)
T 3vkg_A         2079 LDNLNSERGRWEQQSENFNTQMSTVVGDVVLASAFLAYIGFFDQNFRTDLMRK-WMIRLDSVGIKFKSDLSVPSFLSKPE 2157 (3245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH-HHHHHHHHTCCCCTTCCHHHHTSCHH
T ss_pred             HHhhhhccccHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCHHHHHHHHHH-HHHHHHhcCCCCCCCCCHHHHcCCHH
Confidence            99999999999999999999999999999999999999999999999999987 99999988871               


Q ss_pred             cccccCCccccCcc----ccceeeccc----------------cccc-CCceEEEEecccchhHHHHHHHhcCcEEEEec
Q psy2649         562 WFHEWPQEALESVS----LKFLVKSCE----------------SHRY-GNKLTVIRLGQKRVMDQIEKAVMSGFVLLIEN  620 (1637)
Q Consensus       562 ~~~~w~~~gLp~d~----n~~i~~~~~----------------~~~~-~~~l~v~~~~~~~~~~~le~ai~~G~~lli~d  620 (1637)
                      +++.|+.+|||+|+    ||+|+.++.                ++++ ++++.|++++|++|+++||+||++|+||||||
T Consensus      2158 ~i~~W~~~GLP~D~lSiENaiiv~~~~R~PLlIDPq~Qa~~WIk~~~~~~~l~v~~~~d~~f~~~LE~ai~fG~pvLien 2237 (3245)
T 3vkg_A         2158 ERLNWHANSLPSDELCIENAIMLKRFNRYPLVIDPSGQAMEFLMNQYADKKITKTSFLDSSFMKNLESALRFGCPLLVQD 2237 (3245)
T ss_dssp             HHHHHHHTTCCSSHHHHHHHHHTTSCSSCEEEECTTSHHHHHHHHHTGGGCCCCCCC-----HHHHHHHHHHTCCEECCC
T ss_pred             HHHHHHhCCCCCCchhhhHHHHHhcCCCceEEEChHHHHHHHHHHHhccCCceEeecCchhHHHHHHHHHHcCCeEEEcc
Confidence            57899999999998    999998875                2333 45799999999999999999999999999999


Q ss_pred             ccccccchhhhhhhhhhhcCc--ceeEecccccccCCCceeeeeecccCCCCCccccccceEEEEEecccchhHHHHHHH
Q psy2649         621 IGESVDPVLDNLIGRNLIRKG--KVVKIGEKEIDYNPNFKLILHTKLANPHYKPEMQAQTTLINFTVTRDGLEDQLLAEV  698 (1637)
Q Consensus       621 v~e~~dp~L~~ll~~~~~~~g--~~I~ig~~~i~~~p~F~L~l~T~~~~~~~~p~~~~~~~vInftvt~~~Le~qlL~~v  698 (1637)
                      | |.+||+|+|+|.|++++.|  .+|++||++|+|||+|||||+|+++||||+||++++||+||||||++|||+|||+.|
T Consensus      2238 v-E~lDP~L~pvL~k~~~k~gg~~~I~lGdk~idy~~~FrlyltTkl~np~y~Pev~~kvtlINFtvT~~GLedQLL~~v 2316 (3245)
T 3vkg_A         2238 V-ENIDPVLNPVLNKEIRKKGGRILIRLGDQDVDFSPSFMIFLFTRDPTAHFTPDLCSRVTFVNFTVTPSSLQSQCLHEA 2316 (3245)
T ss_dssp             C-C----------------------------------CCCEEEEECCTTCCCCHHHHHTSEEEECCCCHHHHHHHHHHHH
T ss_pred             c-cccchhHHHHHHHHHHhcCceEEEEECCeeEecCCCceEEEEecCCCCCCCHHHHhheEEEEEEecHHHHHHHHHHHH
Confidence            9 8999999999999999887  389999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCHHHHhhhhhccccceeeeeccchhHHHHhhhccCCCccchhHHHhhhhhhhhhHHHHHHHhhhcchhHHHHHH
Q psy2649         699 VKFERPDLELLKANLTKEQNLFKITLKGLEDDLLMRLSSSGGDVLSDKNLVLNLEKSKKTAKEIEIKVKEGKKTAKKIDE  778 (1637)
Q Consensus       699 v~~e~PeLe~~~~~l~~~~~~~~~~l~~lE~~lL~~L~~s~g~iLed~~li~~L~~~K~~~~~i~~~l~e~~~~~~~i~~  778 (1637)
                      |++|+||||++|.+|+++.++++++|++|||+||+.|++++|+||||++||++|+++|.++.+|+++++++++++++|++
T Consensus      2317 v~~ErPeLE~~r~~Li~~~~~~k~~L~~LEd~lL~~Ls~s~GniLdd~~LI~~L~~sK~~s~eI~~kl~~a~~te~~I~~ 2396 (3245)
T 3vkg_A         2317 LKTERPDTHKKRSDLLKIQGEFQVKLRILEKSLLNALSQASGNILDDDSVISTLETLKKETTEIALKVEETETVMQEISE 2396 (3245)
T ss_dssp             HHHHCHHHHHHHHHHHHTTHHHHHHHHTTTHHHHHHHHTTSSCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcchhhhhhhHHHHhhhcccccCccccccchhhHHHHHHHhhhcccc---cchHHHHhhhhhceeeeeeeeeccccc
Q psy2649         779 AREQYRPAAERASVIYFIMNELFKINPIYQFSLKAFTVVFHNAMTKAKKS---DNLKGRVANLVESITFMTFQYTSRGLF  855 (1637)
Q Consensus       779 ~r~~Y~pvA~~~a~ly~~l~~l~~l~~mYqfSl~~f~~lf~~~l~~~~~~---~~~~~r~~~L~~~lt~~~y~~v~r~Lf  855 (1637)
                      +|+.|||+|.|||.|||++++|+.|| ||||||.||+++|..+|++++++   +++++|+.+|++++|+.+|.+||||||
T Consensus      2397 ~R~~YrpvA~r~s~LyF~i~dL~~i~-mYQfSL~~F~~lF~~si~~s~~~~~~~~~~~Rl~~l~~~lt~~vy~~v~RgLF 2475 (3245)
T 3vkg_A         2397 VSALYNPMALSCSRVYFAMEELSQFH-LYQFSLRAFLDIFYNLLNNNPNLVDKKDPNERLVYLSKDIFSMTFNRVTRTLL 2475 (3245)
T ss_dssp             HHHHSHHHHHHHHHHHHHHTGGGGST-TCCCCHHHHHHHHHHHHSSCGGGSSCCCHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             HHHHhHHHHHHHHHHHHHHHHHhcCC-eeeCCHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999 99999999999999999988776   789999999999999999999999999


Q ss_pred             ccchhhhhhhhee-eeeccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCccccchhhccCC
Q psy2649         856 ERDKLIFMAQMTI-QVKSLCMGDQHYHVLQQPKRKALAAANAELAAASQKLAELKAKIAISMMKKEIAREELDFLLRFPF  934 (1637)
Q Consensus       856 ~~d~l~f~~~l~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~~~  934 (1637)
                      ++|||+|+|+||+ .+                                            ....+.++++||+||++|+.
T Consensus      2476 ekdKLlFs~~l~~~~i--------------------------------------------~~~~~~i~~~E~~flL~g~~ 2511 (3245)
T 3vkg_A         2476 NDDKLTFALQLTIISV--------------------------------------------KGTSNEIEESEWDFLLKGGD 2511 (3245)
T ss_dssp             GGGTTHHHHHHHHHHT--------------------------------------------TTSTTCCCHHHHHHHHHTTT
T ss_pred             hhhHHHHHHHHHHHHH--------------------------------------------HhccCCCCHHHHHHHhcCCc
Confidence            9999999999993 44                                            33467899999999999875


Q ss_pred             CCCC-----CCccccccccccccccccc-chhhhhccchhhHHHHHHHHhhhhcCCCCcCCCchhhcc------------
Q psy2649         935 QPGV-----SSPVDFLTNTLWGGVRALS-NLEEFKNLDKDIEAAAKRWKKYIEGETPEKDKLPQEWKN------------  996 (1637)
Q Consensus       935 ~~~~-----~~~~~wl~~~~w~~i~~L~-~l~~F~~l~~~~~~~~~~W~~~~~s~~pe~~~lp~~~~~------------  996 (1637)
                      ....     +++++|+++..|.+++.|+ .+|.|.++.+++..+.+.|+.|+++..||....|..|.+            
T Consensus      2512 ~~~~~~~~~~~~~~wl~~~~w~~i~~L~~~l~~F~~l~~~~~~~~~~W~~~~~s~~pe~~~pp~~w~~~~~~~~~~~~~~ 2591 (3245)
T 3vkg_A         2512 NLTSIKETIPQLDSLLSTTQQKWLICLRQQVPSFSKLVDHIQQNSSDWKQFFGKDQVGEPIIPESWIVAQAQLSNQQSTI 2591 (3245)
T ss_dssp             TGGGCCCCCGGGTTTCCHHHHHHHHHHHHHCGGGTTHHHHHHHTHHHHHHHTCSSCSSCCCCCTTHHHHHHHHSSCCCHH
T ss_pred             cccccccccCCccccCCHHHHHHHHHHHhhChhhhhHHHHHHhCHHHHHHHhcccCcccccCccccccccccccccccch
Confidence            4321     3457999999999999998 899999999999999999999999999998655588853            


Q ss_pred             chHHHHHHHhhhcCCCchhHHHHHHHHHhhcCccccccccchhhhhh-ccCCCCcEEEEeCCCCCCchhHHHhcccccee
Q psy2649         997 KSALQRLCIMRCLRPDRMTYAVRSFVEEKMGDRYVNARAIEFEQSYR-ESSSTTPIFFILSPGVDPTRDVEAVGRKMGFT 1075 (1637)
Q Consensus       997 l~~fqklll~r~lrpdrl~~~~~~~v~~~lg~~~~~~~~~~l~~~~~-~s~~~~Pii~ils~g~DP~~~i~~~A~~~~~~ 1075 (1637)
                      +++|||||++||+||||+..|+++||.+.||.+|++++++||+.+|+ +|+++||+|||+|||+||+..|.+||+++|  
T Consensus      2592 l~~fqkLlllr~lRpDr~~~a~~~fV~~~lG~~fv~~~~~dl~~~~~~es~~~tPlifilSpG~DP~~~l~~lA~~~~-- 2669 (3245)
T 3vkg_A         2592 VSNFRKILLMKAFHSDRVLQYSHSFVCSVFGEDFLNTQELDMANIVEKEVKSSSPLLLCSVPGYDASSKVDDLALQLH-- 2669 (3245)
T ss_dssp             HHHHHHHHHHHHHCGGGHHHHHHHHHHHHSCTTTTCC--CCHHHHHHHSSCTTSCEECEECTTCCCHHHHHHHHHHHT--
T ss_pred             hhHHHHHHHHHHhCccHHHHHHHHHHHHHcCCccCCCCCCCHHHHHhccCCCCccEEEEeCCCCChHHHHHHHHHHhC--
Confidence            69999999999999999999999999999999999999999999999 999999999999999999999999999986  


Q ss_pred             ccCCCccccccCCchh-HHHHhHHHhhhccCCEEEEehhhhHHhhhhcHHHHHHhhhcCCCCceeEEEecCCCCCCCccc
Q psy2649        1076 TDLRNLHNVSLGQGQE-VIAEETIQIASTKGHWAILQNVHLVKNWLPTLDKKMEASFEKPHKNYRLFISAEPASDPEYHI 1154 (1637)
Q Consensus      1076 ~~~~~l~~iSlG~gq~-~~a~~~l~~a~~~G~WvlL~N~HL~~~wl~~Le~~l~~~~~~~h~~FRLwLts~~~~~~~~~~ 1154 (1637)
                         .+++.|||||||+ ..|+++|++|+++|+||+||||||+++||+.||++++.+  ++|++|||||||+|+++     
T Consensus      2670 ---~~~~~iSLGqgQg~~~A~~~i~~a~~~G~WV~LqNcHL~~sWl~~LEk~le~~--~~h~~FRLwLTsep~~~----- 2739 (3245)
T 3vkg_A         2670 ---KQYKSFAIGSPEGFELAEKSIYAAAKSGTWVLLKNIHLAPQWLVQLEKKLHSL--SPHPSFRLFMTSEIHPA----- 2739 (3245)
T ss_dssp             ---CCCCCCBTTSHHHHHHHHHHHHHHHHHTCEEECBCGGGCTTTHHHHHHHHHTC--CCCTTCEEECCEESCTT-----
T ss_pred             ---CCcEEEECCCCccHHHHHHHHHHHHHcCCEEEEechhhhHhHHHHHHHHHHcc--CCCCCeeEEEEecCCCC-----
Confidence               4799999999999 599999999999999999999999999999999999875  68999999999999986     


Q ss_pred             cccccccccccccCCCCchhhhhHHHHhhcCChhHHhhhhhhhhhHHHHHHHHHHHHhhhhhhccCCCCCCCcccccCCc
Q psy2649        1155 IPQGVLDSSIKITNEPPTGMQANLHKALDNFTQEDLEMCSKEAEYKSILFALCYFHAVVAERRKFGPQGWNRSYPFNVGD 1234 (1637)
Q Consensus      1155 fP~~lLq~s~kv~~E~p~glk~~l~~~~~~~~~~~~~~~~~~~~~~~l~f~L~~fHavl~eR~~y~plGw~~~Y~f~~~D 1234 (1637)
                      ||++|||+|+||++|||+|+|+||+|+|.+++++.+  |.++..|++|+|+|||||||++|||+|||+|||++|+||++|
T Consensus      2740 fP~~iLq~siKit~EpP~GlkaNl~rs~~~~~~~~~--~~~~~~~~~llf~L~fFHAvvqERrkfgplGWn~~YeFn~sD 2817 (3245)
T 3vkg_A         2740 LPANLLRMSNVFSYENPPGVKANLLHTFIGIPATRM--DKQPAERSRIYFLLAWFHAIIQERLRYIPLGWTKFFEFNDAD 2817 (3245)
T ss_dssp             SCHHHHHTSEECCBCCCSSHHHHHHHHHTTSCHHHH--TSSSTHHHHHHHHHHHHHHHHHHGGGGTTTSCSSCCCCCHHH
T ss_pred             CCHHHHHhhhHheeCCChhHHHHHHHHHHhCCHHHh--ccCcHHHHHHHHHHHHHHHHHHHHHHhCccccCcccccchHH
Confidence            999999999999999999999999999999988754  455778999999999999999999999999999999999999


Q ss_pred             ceEeehhhHHHhhhc---------CCCCcchhhHHHhhhccCCCCCChhhhHHHHHHHHHhcCcccccccccccC--CCC
Q psy2649        1235 LTISSLVLYNYLEAN---------NNVPWEDLRYLFGEIMYGGHITDDWDRRLCRTYLEEYMNPELLEGETKLAP--GFP 1303 (1637)
Q Consensus      1235 l~~~~~~l~~~l~~~---------~~ipw~al~~li~ei~YGGrv~d~~Drr~L~~~l~~~~~~~~~~~~~~~~~--~~~ 1303 (1637)
                      |.+|.++|++|++.+         +.|||++|+|++|+|+|||||||+||||+|++|+++||+|+++++++.+.+  .+.
T Consensus      2818 l~~s~~~l~~~l~~~~~~~~n~~~~~iPw~~L~yl~gei~YGGrVtDd~DrrlL~t~l~~~~~~~~~~~~~~~~~~~~~~ 2897 (3245)
T 3vkg_A         2818 LRGALDSIDYWVDLYSKGRSNIDPDKIPWIAVRTILGSTIYGGRIDNEFDMRLLYSFLEQLFTPSAFNPDFPLVPSIGLS 2897 (3245)
T ss_dssp             HHHHHHHHHHHHHHHSTTCSCCCTTTSCHHHHHHCCCCCCCSTTCCSSSHHHHHHHHHHHHSSGGGGSSSCEEEGGGTEE
T ss_pred             HHHHHHHHHHHHHHhcccccccCCCCCCHHHHHHHHhhcccCCccCCHHHHHHHHHHHHHHcCHhhcCCcccCCCCCCCC
Confidence            999999999999874         579999999999999999999999999999999999999999999988876  367


Q ss_pred             CCCCCCccccccccccCCCCCCCcccccCCCccccchhhhhHHHHHHHHhcccCCccCC-------C-------CCCcch
Q psy2649        1304 APPNQDYQGYHTYIDESLPPESPILYGLHPNAEIGFLTTQAENVFKIIFELQPRDTAAA-------Q-------GSGVTR 1369 (1637)
Q Consensus      1304 ~p~~~~~~~~~~~i~~l~~~~~p~~~gl~~na~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~-------~~~~~~ 1369 (1637)
                      +|+..++++|.+||+++|+.++|++||||+||++++++++++.++++|+.+||++.+.+       +       +++.++
T Consensus      2898 ~P~~~~~~~y~~~I~~LP~~~~P~~fGLh~NA~i~~~~~~s~~l~~~ll~lq~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 2977 (3245)
T 3vkg_A         2898 VPEGTTRAHFMKWIEALPEISTPIWLGLPENAESLLLSNKARKMINDLQKMQSSEEDGEDDQVSGSSKKESSSSSSEDKG 2977 (3245)
T ss_dssp             CCCCSSHHHHHHHHTTSCSCCCGGGGTSCTTHHHHHHHHHHHHHHHHHHHHHHTTTC---------------CHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCCCCccccCCChhHHHHHHHHHHHHHHHHHHHhCCcccccccccccccccccccccccCCCc
Confidence            89999999999999999999999999999999999999999999999999999765431       0       012245


Q ss_pred             HHHHHHHHHHHHHhCCCCCcHhhhhhccccCCceEEEeehhhhhhHhHHHHHHhhhhhhccccccceeecccHHHHhhcc
Q psy2649        1370 EEKVRQVLDEILDKCPDAFNIKDMMGRVEDRTPYIIVAFQECERMNILMSEIKRSLKELNLGLKGELTITTDMEALEYSI 1449 (1637)
Q Consensus      1370 ~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~~~p~~~~l~qE~~~~n~Ll~~I~~sL~~l~~~l~G~~~~s~~l~~l~~~L 1449 (1637)
                      ++.+...+++++++||+.++..... .....+|+++|+.||++|||+|++.|++||.+|.++|+|.++||+++++++++|
T Consensus      2978 ~~~v~~~~~~~l~~lP~~~~~~~~~-~~~~~~pl~~vl~QE~~r~n~Ll~~ir~sL~~L~~aikG~i~mS~~le~l~~sl 3056 (3245)
T 3vkg_A         2978 KAKLRATITEWTKLLPKPLKQLKRT-TQNIKDPLFRCFEREISTGGKLVKKITNDLANLLELISGNIKSTNYLRSLTTSI 3056 (3245)
T ss_dssp             HHC-----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred             HHHHHHHHHHHHHhCccccchhhcc-ccccCChHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCCcCCHHHHHHHHHH
Confidence            5568889999999999988743211 112358999999999999999999999999999999999999999999999999


Q ss_pred             cccCCCchhhhcccccccchhHHHHHHHHHHHHHhhhhccC-CCCchhhcccccCchhHHHHHHHHhhhhcCCCcccccc
Q psy2649        1450 FMDTVPPSWEKRAYPSMLGLGGWFADLMLRLKELENWVGDF-QLPSSVWLAGFFNPQSFLTAIMQSTARKNEWPLDKMCL 1528 (1637)
Q Consensus      1450 ~~~~VP~~W~~~~~~s~~~l~~Wl~dL~~R~~~l~~w~~~~-~~p~~~wL~~~f~P~aFLtA~~Q~~ar~~~~~ld~L~~ 1528 (1637)
                      ..|+||..|.+.+|||.++|++|++||.+|++|++.|+..+ +.|.+|||||||||+|||||++|++||+++||+|+|.|
T Consensus      3057 ~~~~VP~~W~~~syps~k~L~~W~~dL~~R~~~l~~W~~~~~~~p~~~WLsgff~Pq~FLTA~~Q~~ARk~~~plD~l~l 3136 (3245)
T 3vkg_A         3057 SKGIVPKEWKWYSVPETISLSVWISDFSKRMQQLSEISESSDYSSIQVWLGGLLNPEAYITATRQSASQLNGWSLENLRL 3136 (3245)
T ss_dssp             ---------CCSCCCSSCCHHHHHHHHHHHHHHHHHHHHC-------CCGGGSSCHHHHHHHHHHHHHHHTC------CC
T ss_pred             HcCCCchhhhcccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCceEecCCCcchHHHHHHHHHHHHHHhCCCCcccee
Confidence            99999999999999999999999999999999999999875 68999999999999999999999999999999999999


Q ss_pred             -ccccccccccccCCCCCCCccccccccccccccccccccccccccccCCCCcEEEEEeeccchhh---ccccccCcccc
Q psy2649        1529 -QCDVTKKQREDFTQAPRDGAYVNGLYMEGARWDIALGVISDAKLKELFPMMPVIYIKAITQDKQD---LRNMYECPVYK 1604 (1637)
Q Consensus      1529 -~~~v~~~~~~~~~~~~~~g~~I~GL~L~Ga~wd~~~~~L~e~~~~~~~~~lP~i~~~~~~~~~~~---~~~~y~cPvY~ 1604 (1637)
                       .++|++...    . |++|+||+|||||||+||.+.+++.++.    +.+||++|++|+.....+   ..+.|.||||+
T Consensus      3137 ~~~~V~~~~~----~-p~~G~yI~GL~LeGA~WD~~~~~l~e~~----~~~lPvi~l~~~~~~~~~~~~~~~~y~cPvYk 3207 (3245)
T 3vkg_A         3137 HASSLGKISS----E-GGASFNVKGMALEGAVWNNDQLTPTDIL----STPISIATLTWKDKDDPIFNNSSSKLSVPVYL 3207 (3245)
T ss_dssp             CBC---------------CCEEECSCEEESCEECSSSEECCSSS----EEECCCEEECCCC---CCTTSGGGEEEEEEES
T ss_pred             eeEEEecCCC----C-CCceEEEeCEEEeccEecCCCceecCcc----cCCCCceeEEEeecccccccCCCCeEEcceEe
Confidence             999985422    2 7899999999999999999988888765    467999999998754332   35689999999


Q ss_pred             ccccCCcEEEEEecc--cCCCCcchhhhhhhhccC
Q psy2649        1605 TRQRGPNYVWTFNLK--TKEKPAKWTMAGVALLFM 1637 (1637)
Q Consensus      1605 ~~~R~~n~i~~~~l~--~~~~~~~wi~rGvAl~~~ 1637 (1637)
                      |+.|++ +++.++||  ++.+++|||+|||||+|+
T Consensus      3208 t~~R~~-~l~~~~l~~~t~~~~~~Wi~rGVALl~~ 3241 (3245)
T 3vkg_A         3208 NETRSE-LLFSIDLPYDQSTSKQNWYQRSVSISSW 3241 (3245)
T ss_dssp             STTCCC-EEEEEEEEBCTTSCHHHHHTTTCEEESC
T ss_pred             cCCCCC-EEEEEEEECCCCCCHhHHHHHHHHHHcC
Confidence            999984 56555555  578999999999999996



>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>2rr7_A Dynein heavy chain 9; microtubule-binding, stalk head, MTBD, antiparallel coil, motor protein, DSH; NMR {Chlamydomonas reinhardtii} Back     alignment and structure
>3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A Back     alignment and structure
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} Back     alignment and structure
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A* Back     alignment and structure
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens} Back     alignment and structure
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus} Back     alignment and structure
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli} Back     alignment and structure
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii} Back     alignment and structure
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis} Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20 Back     alignment and structure
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp} Back     alignment and structure
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster} Back     alignment and structure
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C Back     alignment and structure
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens} Back     alignment and structure
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A* Back     alignment and structure
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens} Back     alignment and structure
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D* Back     alignment and structure
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens} Back     alignment and structure
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli} Back     alignment and structure
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* Back     alignment and structure
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20 Back     alignment and structure
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A* Back     alignment and structure
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens} Back     alignment and structure
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix} Back     alignment and structure
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A Back     alignment and structure
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A* Back     alignment and structure
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B* Back     alignment and structure
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E* Back     alignment and structure
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A Back     alignment and structure
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A* Back     alignment and structure
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Back     alignment and structure
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus} Back     alignment and structure
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis} Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* Back     alignment and structure
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A* Back     alignment and structure
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A* Back     alignment and structure
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A* Back     alignment and structure
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A* Back     alignment and structure
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae} Back     alignment and structure
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C* Back     alignment and structure
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A* Back     alignment and structure
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20 Back     alignment and structure
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A Back     alignment and structure
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus} Back     alignment and structure
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} Back     alignment and structure
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* Back     alignment and structure
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A Back     alignment and structure
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* Back     alignment and structure
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Back     alignment and structure
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B} Back     alignment and structure
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B* Back     alignment and structure
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 Back     alignment and structure
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>4akg_A Glutathione S-transferase class-MU 26 kDa isozyme heavy chain cytoplasmic; motor protein, AAA+ protein, ASCE protein, P-loop ntpase; HET: ATP ADP; 3.30A {Schistosoma japonicum} PDB: 4ai6_A* 4akh_A* 4aki_A* 3qmz_A Back     alignment and structure
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus} Back     alignment and structure
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A* Back     alignment and structure
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A* Back     alignment and structure
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A Back     alignment and structure
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E* Back     alignment and structure
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A Back     alignment and structure
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E* Back     alignment and structure
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1 Back     alignment and structure
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans} Back     alignment and structure
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A* Back     alignment and structure
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20 Back     alignment and structure
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G Back     alignment and structure
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} Back     alignment and structure
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium} Back     alignment and structure
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1 Back     alignment and structure
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli} Back     alignment and structure
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A Back     alignment and structure
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli} Back     alignment and structure
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1 Back     alignment and structure
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi} Back     alignment and structure
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron} Back     alignment and structure
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20 Back     alignment and structure
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A Back     alignment and structure
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A Back     alignment and structure
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens} Back     alignment and structure
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Back     alignment and structure
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A* Back     alignment and structure
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii} Back     alignment and structure
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A* Back     alignment and structure
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A Back     alignment and structure
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A Back     alignment and structure
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus} Back     alignment and structure
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A* Back     alignment and structure
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2 Back     alignment and structure
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A Back     alignment and structure
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1637
d1d2na_246 Hexamerization domain of N-ethylmalemide-sensitive 97.35
d1ixza_247 AAA domain of cell division protein FtsH {Thermus 96.61
d1lv7a_256 AAA domain of cell division protein FtsH {Escheric 96.24
d1jbka_195 ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} 96.21
d1ixsb2239 Holliday junction helicase RuvB {Thermus thermophi 96.19
d1e32a2258 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 96.1
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 95.81
d1w44a_321 NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} 95.73
d1r7ra3265 Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu 95.72
d1r6bx2268 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 95.72
d1qvra2387 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 95.7
d1ofha_309 HslU {Haemophilus influenzae [TaxId: 727]} 95.48
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 95.32
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 95.3
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 94.95
d1qvra3315 ClpB, AAA+ modules {Thermus thermophilus [TaxId: 2 93.97
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 93.66
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 93.13
d1r6bx3315 ClpA, an Hsp100 chaperone, AAA+ modules {Escherich 92.94
d1gvnb_273 Plasmid maintenance system epsilon/zeta, toxin zet 92.68
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 92.08
d2a5yb3277 CED-4, NB-ARC domain {Caenorhabditis elegans [TaxI 92.02
d2iyva1165 Shikimate kinase (AroK) {Mycobacterium tuberculosi 91.42
d2qy9a2211 GTPase domain of the signal recognition particle r 91.29
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 91.06
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 90.93
d1l8qa2213 Chromosomal replication initiation factor DnaA {Aq 90.83
d1okkd2207 GTPase domain of the signal recognition particle r 90.69
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 90.61
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 90.04
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 90.01
d1j8yf2211 GTPase domain of the signal sequence recognition p 89.91
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 89.76
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 89.67
d1g41a_443 HslU {Haemophilus influenzae [TaxId: 727]} 89.4
d1vmaa2213 GTPase domain of the signal recognition particle r 89.31
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 88.67
d2fnaa2283 Archaeal ATPase SSO1545 {Sulfolobus solfataricus [ 88.11
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 87.56
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 87.11
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 86.8
d1ls1a2207 GTPase domain of the signal sequence recognition p 86.61
d1sxje2252 Replication factor C5 {Baker's yeast (Saccharomyce 85.85
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 85.72
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 85.65
d1yj5a2172 5' polynucleotide kinase-3' phosphatase, C-termina 84.15
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 83.49
d1g8pa_333 ATPase subunit of magnesium chelatase, BchI {Rhodo 82.94
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 82.83
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 82.54
d1zina1182 Adenylate kinase {Bacillus stearothermophilus [Tax 82.24
d1svma_362 Papillomavirus large T antigen helicase domain {Si 81.98
d2cdna1181 Adenylate kinase {Mycobacterium tuberculosis [TaxI 80.17
d1s3ga1182 Adenylate kinase {Bacillus globisporus [TaxId: 145 80.13
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 80.08
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein
species: Chinese hamster (Cricetulus griseus) [TaxId: 10029]
Probab=97.35  E-value=6.8e-05  Score=82.15  Aligned_cols=69  Identities=20%  Similarity=0.156  Sum_probs=54.3

Q ss_pred             CCCCceEEEeecCCchhhHHhHHHhhccccceEEEecc---ccCcchhhhHHHHHHHHhhcccccEEEEeccc
Q psy2649          73 APRGNALLVGVGGSGKQSLSRLSAFISTLEPFQIQLKK---NYGIPDLKIDLASLYLKAGLKNAGIMFLMTDS  142 (1637)
Q Consensus        73 ~p~gh~lLvG~~GsGr~sl~rlaa~~~~~~~~~i~~~~---~y~~~~f~~dLk~~~~~ag~~~~~~v~l~~d~  142 (1637)
                      .|.+++||.|++||||++++|-.|.-.++.++.+..+.   +|...+-...++.++..| .++.|+|++++|-
T Consensus        38 ~p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A-~~~~p~il~iDEi  109 (246)
T d1d2na_          38 TPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDA-YKSQLSCVVVDDI  109 (246)
T ss_dssp             CSEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEECGGGCTTCCHHHHHHHHHHHHHHH-HTSSEEEEEECCH
T ss_pred             CCCeEEEEECcCCCCHHHHHHHHhhcccccccccccccccccccccchhhhhhhhhhhh-hhcccceeehhhh
Confidence            46678999999999999999999999999999987543   333333445688888887 5677888887774



>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]} Back     information, alignment and structure
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]} Back     information, alignment and structure
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]} Back     information, alignment and structure
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure