Psyllid ID: psy2782

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MPELTELDKAVSSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAANIT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcHHHHHHHHHHHHcccEEEccEEEEEEEEcccEEEEEEcccEEEcccccEEEEEcccccccHHHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccHcccccHccHHcccccccHHHHccccccHHHHHHHHHHccccccccEEEEEEEccccEEEEEccccccccccccEEEEEcccEHHcHHHHHHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
MPELTELDKAvssggeaelhddsgtesdsedsipeleasgdplgsagasgLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVtirksknilfvinkpdvfknpasdtyiVFGEAKIEDLSQQAQVAAAEkfkapeispaanit
Flexible Loop (DISEMBL)
MPELTELDKAvssggeaelhddsgtesdsEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKimsklglkqiqgvsrvtirksknilfvinkpdvfknpASDTYIVFGEAKIEDLSQQAQVAAAekfkapeispaanit
Low Complexity Region (SEG)
MPELTELDKAVSSGGEAELHddsgtesdsedsIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAANIT
Disordered region (IsUnstruct)
**************************************************************************LGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIE**************************
Disordered Region (DISOPRED)
*PE***********************************************************************LGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIED*************************
Disordered Region (DISEMBL)
*********************************PELEASGDPLGSAGASGLAN*****************IMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAANIT
Disordered Region (DISPRO)
*****************************************************************KK*RK*MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKF************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MPELTELDKAVSSGGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAANIT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q94518	217	Nascent polypeptide-assoc	yes	N/A	0.979	0.663	0.707	3e-45
P70670	2187	Nascent polypeptide-assoc	yes	N/A	0.775	0.052	0.708	2e-41
Q8AWF2	215	Nascent polypeptide-assoc	yes	N/A	0.789	0.539	0.696	1e-40
Q6IP73	213	Nascent polypeptide-assoc	N/A	N/A	0.836	0.577	0.674	3e-40
Q68F90	214	Nascent polypeptide-assoc	yes	N/A	0.836	0.574	0.669	1e-39
Q6QN10	215	Nascent polypeptide-assoc	N/A	N/A	0.775	0.530	0.691	3e-39
Q60817	215	Nascent polypeptide-assoc	no	N/A	0.775	0.530	0.691	3e-39
Q13765	215	Nascent polypeptide-assoc	no	N/A	0.775	0.530	0.691	3e-39
Q5R9I9	215	Nascent polypeptide-assoc	yes	N/A	0.775	0.530	0.691	3e-39
Q5E9A1	215	Nascent polypeptide-assoc	yes	N/A	0.775	0.530	0.691	3e-39

>sp|Q94518|NACA_DROME Nascent polypeptide-associated complex subunit alpha OS=Drosophila melanogaster GN=Nacalpha PE=1 SV=2

 Score =  180 bits (457), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/154 (70%), Positives = 123/154 (79%), Gaps = 10/154 (6%)

Query: 1   MPELTEL--DKAVSSGGEAELHD----DSGTESDSEDSIPELE---ASGDPLGSAGASGL 51
           MPELTE+  + A S+  EA+  D    D G++SDS+  +P LE   A+   LG  GA+GL
Sbjct: 1   MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLG-GGATGL 59

Query: 52  ANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDT 111
             DLVSKAKQSRGEKKARKIM KLGLKQIQGV+RVTIRKSKNILFVIN PDV+KNP SDT
Sbjct: 60  PIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDT 119

Query: 112 YIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAAN 145
           YIVFGEAKIEDLSQQAQVAAAEKFKAPE + AA+
Sbjct: 120 YIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAAD 153

May promote appropriate targeting of ribosome-nascent polypeptide complexes (By similarity). Required for correct localization of the osk/oskar protein to the posterior pole during embryonic development. The osk protein directs the recruitment of molecules responsible for posterior body patterning and germline formation in the embryo.
Drosophila melanogaster (taxid: 7227)

>sp|P70670|NACAM_MOUSE Nascent polypeptide-associated complex subunit alpha, muscle-specific form OS=Mus musculus GN=Naca PE=1 SV=2

 Score =  167 bits (422), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 85/120 (70%), Positives = 98/120 (81%), Gaps = 6/120 (5%)

Query: 23   SGTESDSEDSIPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLG 76
            SGTESDS++S+PELE       +      A A+ +  + VSKAKQSR EKKARK MSKLG
Sbjct: 1997 SGTESDSDESVPELEEQDSTQTATQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 2056

Query: 77   LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
            L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 2057 LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 2116

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites) (By similarity). Isoform 1 and isoform 2 appear to bind DNA and play roles in transcription. May act to regulate the expression of genes involved in the development of myotubes.

Mus musculus (taxid: 10090)

>sp|Q8AWF2|NACA_ORENI Nascent polypeptide-associated complex subunit alpha OS=Oreochromis niloticus GN=naca PE=2 SV=1

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 85/122 (69%), Positives = 96/122 (78%), Gaps = 6/122 (4%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS+DS+PELE           +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDDSVPELEEQDSAQTQTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Query: 137 AP 138
            P
Sbjct: 145 VP 146

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Oreochromis niloticus (taxid: 8128)

>sp|Q6IP73|NACA_XENLA Nascent polypeptide-associated complex subunit alpha OS=Xenopus laevis GN=naca PE=2 SV=1

 Score =  163 bits (413), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/132 (67%), Positives = 98/132 (74%), Gaps = 9/132 (6%)

Query: 14  GGEAELHDD-----SGTESDSEDSIPELEASGDPLGSAGASGLANDL----VSKAKQSRG 64
             E ELH       SGTESDS+DS PELE              A ++    VSKAKQSR 
Sbjct: 11  AAEQELHQPQVESGSGTESDSDDSPPELEQDTQTTTQQAQLAAAAEIDEEPVSKAKQSRS 70

Query: 65  EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLS 124
           EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLS
Sbjct: 71  EKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS 130

Query: 125 QQAQVAAAEKFK 136
           QQAQ+AAAEKFK
Sbjct: 131 QQAQLAAAEKFK 142

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Xenopus laevis (taxid: 8355)

>sp|Q68F90|NACA_XENTR Nascent polypeptide-associated complex subunit alpha OS=Xenopus tropicalis GN=naca PE=2 SV=1

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 99/133 (74%), Gaps = 10/133 (7%)

Query: 14  GGEAELHDD-----SGTESDSEDSIPELEASGDPLGSAGASG-----LANDLVSKAKQSR 63
             E ELH       SGTESDS+DS PELE       +  A       +  + VSKAKQSR
Sbjct: 11  AAEQELHQPQAETGSGTESDSDDSPPELEQDSTQTTTQQAQLAAAAEIDEEPVSKAKQSR 70

Query: 64  GEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDL 123
            EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDL
Sbjct: 71  SEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDL 130

Query: 124 SQQAQVAAAEKFK 136
           SQQAQ+AAAEKFK
Sbjct: 131 SQQAQLAAAEKFK 143

May promote appropriate targeting of ribosome-nascent polypeptide complexes.

Xenopus tropicalis (taxid: 8364)

>sp|Q6QN10|NACA_CHILA Nascent polypeptide-associated complex subunit alpha OS=Chinchilla lanigera PE=2 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 6/120 (5%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEGQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Chinchilla lanigera (taxid: 34839)

>sp|Q60817|NACA_MOUSE Nascent polypeptide-associated complex subunit alpha OS=Mus musculus GN=Naca PE=1 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 6/120 (5%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQTATQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites) (By similarity). Isoform 1 and isoform 2 appear to bind DNA and play roles in transcription. Isoform 1 may function as a specific coactivator for JUN, acting to stabilize the interaction of JUN homodimers with promoter elements.

Mus musculus (taxid: 10090)

>sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex subunit alpha OS=Homo sapiens GN=NACA PE=1 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 6/120 (5%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Homo sapiens (taxid: 9606)

>sp|Q5R9I9|NACA_PONAB Nascent polypeptide-associated complex subunit alpha OS=Pongo abelii GN=NACA PE=2 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 6/120 (5%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Pongo abelii (taxid: 9601)

>sp|Q5E9A1|NACA_BOVIN Nascent polypeptide-associated complex subunit alpha OS=Bos taurus GN=NACA PE=1 SV=1

 Score =  160 bits (404), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 83/120 (69%), Positives = 96/120 (80%), Gaps = 6/120 (5%)

Query: 23  SGTESDSEDSIPELEASGDPLGSAGASG------LANDLVSKAKQSRGEKKARKIMSKLG 76
           SGTESDS++S+PELE       +   +       +  + VSKAKQSR EKKARK MSKLG
Sbjct: 25  SGTESDSDESVPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLG 84

Query: 77  LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
           L+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct: 85  LRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

Prevents inappropriate targeting of non-secretory polypeptides to the endoplasmic reticulum (ER). Binds to nascent polypeptide chains as they emerge from the ribosome and blocks their interaction with the signal recognition particle (SRP), which normally targets nascent secretory peptides to the ER. Also reduces the inherent affinity of ribosomes for protein translocation sites in the ER membrane (M sites). May act as a specific coactivator for JUN, binding to DNA and stabilizing the interaction of JUN homodimers with target gene promoters.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
332030863	258	Nascent polypeptide-associated complex s	0.965	0.550	0.74	2e-50
307190648	245	Nascent polypeptide-associated complex s	0.965	0.579	0.74	3e-50
156538110	211	PREDICTED: nascent polypeptide-associate	0.979	0.682	0.741	4e-50
307206942	214	Nascent polypeptide-associated complex s	0.972	0.668	0.731	5e-50
328792166	241	PREDICTED: nascent polypeptide-associate	0.965	0.589	0.726	8e-49
380027154	214	PREDICTED: nascent polypeptide-associate	0.965	0.663	0.726	1e-48
350411200	214	PREDICTED: nascent polypeptide-associate	0.965	0.663	0.726	1e-48
340709764	601	PREDICTED: protein lunapark-B-like [Bomb	0.972	0.237	0.721	2e-48
383859130	212	PREDICTED: nascent polypeptide-associate	0.965	0.669	0.709	1e-47
195026863	218	GH21313 [Drosophila grimshawi] gi|195093	0.979	0.660	0.703	2e-47

>gi|332030863|gb|EGI70499.1| Nascent polypeptide-associated complex subunit alpha [Acromyrmex echinatior]

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/150 (74%), Positives = 123/150 (82%), Gaps = 8/150 (5%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDPLGSAG-----ASGLAN 53
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P G+ G      +GL  
Sbjct: 38  MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTP-GTVGFPGTTVTGLPI 96

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 97  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 156

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           VFGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 157 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPA 186

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307190648|gb|EFN74612.1| Nascent polypeptide-associated complex subunit alpha [Camponotus floridanus]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/150 (74%), Positives = 123/150 (82%), Gaps = 8/150 (5%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDPLGSAG-----ASGLAN 53
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P G+ G      +GL  
Sbjct: 32  MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTP-GTVGFPGPTVTGLPI 90

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 91  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 150

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           VFGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 151 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPA 180

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156538110|ref|XP_001608212.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 1 [Nasonia vitripennis] gi|345491829|ref|XP_003426718.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 2 [Nasonia vitripennis]

 Score =  202 bits (514), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/147 (74%), Positives = 121/147 (82%), Gaps = 3/147 (2%)

Query: 1   MPELTELDKAVSS-GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAGASGLANDLVS 57
           MPELTELDKA SS   +AE   +SGT+SDS+D+IPELE  A+G    +    G+  D+VS
Sbjct: 1   MPELTELDKAASSEPTKAEAAAESGTDSDSDDTIPELEDAATGGVTFAGNVPGMPVDMVS 60

Query: 58  KAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGE 117
           KAKQSRGEKKARKIMSKLGLK + GV+RVTIRKSKNILFVINKPDV KNPASDTYIVFGE
Sbjct: 61  KAKQSRGEKKARKIMSKLGLKPVTGVNRVTIRKSKNILFVINKPDVLKNPASDTYIVFGE 120

Query: 118 AKIEDLSQQAQVAAAEKFKAPEISPAA 144
           AKIEDLSQQAQVAAAEKFK P +  AA
Sbjct: 121 AKIEDLSQQAQVAAAEKFKEPPVISAA 147

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307206942|gb|EFN84786.1| Nascent polypeptide-associated complex subunit alpha [Harpegnathos saltator]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/149 (73%), Positives = 120/149 (80%), Gaps = 6/149 (4%)

Query: 1   MPELTELDKAVSS-GGEAELHD-DSGTESDSEDSIPELEASGDP----LGSAGASGLAND 54
           MPELTELDKA SS   + EL    S T+SDS+D+IPELE +G P          +GL  D
Sbjct: 1   MPELTELDKAASSEPTKVELVGIGSATDSDSDDTIPELEDAGTPGTVSFPGTAVTGLPID 60

Query: 55  LVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIV 114
           +VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYIV
Sbjct: 61  MVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYIV 120

Query: 115 FGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           FGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 121 FGEAKIEDLSQQAQVAAAEKFKEPPVVPA 149

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792166|ref|XP_623555.2| PREDICTED: nascent polypeptide-associated complex subunit alpha-like isoform 1 [Apis mellifera]

 Score =  197 bits (502), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 122/150 (81%), Gaps = 8/150 (5%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 28  MPELTELDKAASSEPTKVEAA-ATGSGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 86

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 87  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 146

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           VFGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 147 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPA 176

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380027154|ref|XP_003697296.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like [Apis florea]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 122/150 (81%), Gaps = 8/150 (5%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 1   MPELTELDKAASSEPTKVEAA-ATGSGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 59

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 60  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 119

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           VFGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 120 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPA 149

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350411200|ref|XP_003489271.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like [Bombus impatiens]

 Score =  197 bits (501), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 109/150 (72%), Positives = 122/150 (81%), Gaps = 8/150 (5%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 1   MPELTELDKAASSEPTKVEAAAAG-SGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 59

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 60  DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 119

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           VFGEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 120 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPA 149

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709764|ref|XP_003393472.1| PREDICTED: protein lunapark-B-like [Bombus terrestris]

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/151 (72%), Positives = 122/151 (80%), Gaps = 8/151 (5%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAG--ASGLAN 53
           MPELTELDKA SS     EA     SGT++DS+D+IPEL+   +G  +G  G   +GL  
Sbjct: 388 MPELTELDKAASSEPTKVEAAAAG-SGTDTDSDDTIPELDDAGAGGTVGFPGTTVTGLPI 446

Query: 54  DLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYI 113
           D+VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYI
Sbjct: 447 DMVSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYI 506

Query: 114 VFGEAKIEDLSQQAQVAAAEKFKAPEISPAA 144
           VFGEAKIEDLSQQAQVAAAEKFK P + PA 
Sbjct: 507 VFGEAKIEDLSQQAQVAAAEKFKEPPVIPAT 537

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383859130|ref|XP_003705050.1| PREDICTED: nascent polypeptide-associated complex subunit alpha-like [Megachile rotundata]

 Score =  194 bits (492), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/148 (70%), Positives = 120/148 (81%), Gaps = 6/148 (4%)

Query: 1   MPELTELDKAVSS---GGEAELHDDSGTESDSEDSIPELE--ASGDPLGSAGASGLANDL 55
           MPELTELDKA SS     EA     SGT+SDS+D++P+L+   +G  +G +  +    D+
Sbjct: 1   MPELTELDKAASSEPSKVEATAAG-SGTDSDSDDTLPDLDDAGAGGTVGFSATTVTGLDM 59

Query: 56  VSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVF 115
           VSKAKQSRGEKKARK+MSKLGLK +QGV+RVTIRKSKNILFVINKPDV KNPASDTYIVF
Sbjct: 60  VSKAKQSRGEKKARKLMSKLGLKPVQGVNRVTIRKSKNILFVINKPDVLKNPASDTYIVF 119

Query: 116 GEAKIEDLSQQAQVAAAEKFKAPEISPA 143
           GEAKIEDLSQQAQVAAAEKFK P + PA
Sbjct: 120 GEAKIEDLSQQAQVAAAEKFKEPPVIPA 147

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195026863|ref|XP_001986352.1| GH21313 [Drosophila grimshawi] gi|195093600|ref|XP_001997739.1| GH22262 [Drosophila grimshawi] gi|193902352|gb|EDW01219.1| GH21313 [Drosophila grimshawi] gi|193905986|gb|EDW04853.1| GH22262 [Drosophila grimshawi]

 Score =  193 bits (490), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/155 (70%), Positives = 123/155 (79%), Gaps = 11/155 (7%)

Query: 1   MPELTEL-DKAVSSGGEAELHDD-------SGTESDSEDSIPELEA--SGDPLGSAGASG 50
           MPELTE+ ++A S+  EA+L +D        G+ESDS D IP LE   +G      GA+G
Sbjct: 1   MPELTEIKNEAPSTSAEAKLSEDVDVRVEDDGSESDS-DMIPGLEEAETGTTQLGGGATG 59

Query: 51  LANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASD 110
           L  D+VSKAKQSRGEKKARKIM KLGLKQIQGV+RVTIRKSKNILFVIN PDV+KNP SD
Sbjct: 60  LPIDVVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSD 119

Query: 111 TYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAAN 145
           TYIVFGEAKIEDLSQQAQVAAAEKFKAPE + AA+
Sbjct: 120 TYIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAAD 154

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
FB|FBgn0086904	217	Nacalpha "Nascent polypeptide	0.979	0.663	0.668	4.6e-41
MGI|MGI:106095	215	Naca "nascent polypeptide-asso	0.619	0.423	0.802	1.7e-34
UNIPROTKB|Q2HYP8	160	Q2HYP8 "Nascent-polypeptide-as	0.768	0.706	0.677	3.2e-33
UNIPROTKB|H9KYU8	192	NACA2 "Uncharacterized protein	0.707	0.541	0.709	6.7e-33
UNIPROTKB|Q5E9A1	215	NACA "Nascent polypeptide-asso	0.707	0.483	0.709	6.7e-33
UNIPROTKB|Q13765	215	NACA "Nascent polypeptide-asso	0.707	0.483	0.709	6.7e-33
MGI|MGI:3603030	1504	Nacad "NAC alpha domain contai	0.911	0.089	0.568	2.6e-31
UNIPROTKB|O15069	1562	NACAD "NAC-alpha domain-contai	0.897	0.084	0.566	9.4e-31
TAIR|locus:2092462	203	AT3G12390 [Arabidopsis thalian	0.639	0.463	0.702	2.3e-30
WB|WBGene00022042	197	icd-2 [Caenorhabditis elegans	0.734	0.548	0.638	3e-30

FB|FBgn0086904 Nacalpha "Nascent polypeptide associated complex protein alpha subunit" [Drosophila melanogaster (taxid:7227)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 103/154 (66%), Positives = 114/154 (74%)

Query:     1 MPELTEL--DKAVSSGGEAELHXXXX----XXXXXXXXIPELE---ASGDPLGSAGASGL 51
             MPELTE+  + A S+  EA+                  +P LE   A+   LG  GA+GL
Sbjct:     1 MPELTEIKSEAAPSTSAEAKPEDVRVEDDGSDSDSDGGMPGLEEAVAATTQLGG-GATGL 59

Query:    52 ANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDT 111
               DLVSKAKQSRGEKKARKIM KLGLKQIQGV+RVTIRKSKNILFVIN PDV+KNP SDT
Sbjct:    60 PIDLVSKAKQSRGEKKARKIMLKLGLKQIQGVNRVTIRKSKNILFVINNPDVYKNPHSDT 119

Query:   112 YIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAAN 145
             YIVFGEAKIEDLSQQAQVAAAEKFKAPE + AA+
Sbjct:   120 YIVFGEAKIEDLSQQAQVAAAEKFKAPEAAGAAD 153

GO:0048477 "oogenesis" evidence=IMP

GO:0005854 "nascent polypeptide-associated complex" evidence=ISS;NAS

GO:0005515 "protein binding" evidence=IPI

GO:0007317 "regulation of pole plasm oskar mRNA localization" evidence=IMP

GO:0022008 "neurogenesis" evidence=IMP

MGI|MGI:106095 Naca "nascent polypeptide-associated complex alpha polypeptide" [Mus musculus (taxid:10090)]

 Score = 357 (130.7 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
 Identities = 73/91 (80%), Positives = 82/91 (90%)

Query:    46 AGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFK 105
             A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K
Sbjct:    54 AAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYK 113

Query:   106 NPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
             +PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct:   114 SPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

GO:0003677 "DNA binding" evidence=IEA

GO:0003713 "transcription coactivator activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IDA

UNIPROTKB|Q2HYP8 Q2HYP8 "Nascent-polypeptide-associated complex alpha polypeptide" [Ictalurus punctatus (taxid:7998)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 80/118 (67%), Positives = 92/118 (77%)

Query:    33 IPELEASGDPLGS----AGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTI 88
             +PELE            A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RVTI
Sbjct:    35 VPELEEQDSTQTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTI 94

Query:    89 RKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPAANI 146
             RKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK  +   A+NI
Sbjct:    95 RKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFKV-QGEAASNI 151

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

UNIPROTKB|H9KYU8 NACA2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 78/110 (70%), Positives = 89/110 (80%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    12 VPELEEHDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 71

Query:    87 TIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
             TIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct:    72 TIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 121

GO:0003713 "transcription coactivator activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0017025 "TBP-class protein binding" evidence=IEA

UNIPROTKB|Q5E9A1 NACA "Nascent polypeptide-associated complex subunit alpha" [Bos taurus (taxid:9913)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 78/110 (70%), Positives = 89/110 (80%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    35 VPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 94

Query:    87 TIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
             TIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct:    95 TIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

GO:0005634 "nucleus" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0015031 "protein transport" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|Q13765 NACA "Nascent polypeptide-associated complex subunit alpha" [Homo sapiens (taxid:9606)]

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 78/110 (70%), Positives = 89/110 (80%)

Query:    33 IPELE------ASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRV 86
             +PELE      A+      A A+ +  + VSKAKQSR EKKARK MSKLGL+Q+ GV+RV
Sbjct:    35 VPELEEQDSTQATTQQAQLAAAAEIDEEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRV 94

Query:    87 TIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFK 136
             TIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ+AAAEKFK
Sbjct:    95 TIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQLAAAEKFK 144

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0019048 "virus-host interaction" evidence=IEA

GO:0005854 "nascent polypeptide-associated complex" evidence=TAS

GO:0006412 "translation" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

GO:0003231 "cardiac ventricle development" evidence=ISS

GO:0010664 "negative regulation of striated muscle cell apoptotic process" evidence=ISS

GO:0043403 "skeletal muscle tissue regeneration" evidence=ISS

GO:0048633 "positive regulation of skeletal muscle tissue growth" evidence=ISS

GO:0048742 "regulation of skeletal muscle fiber development" evidence=ISS

GO:0061384 "heart trabecula morphogenesis" evidence=ISS

GO:1901227 "negative regulation of transcription from RNA polymerase II promoter involved in heart development" evidence=ISS

GO:1901228 "positive regulation of transcription from RNA polymerase II promoter involved in heart development" evidence=ISS

GO:2000138 "positive regulation of cell proliferation involved in heart morphogenesis" evidence=ISS

GO:0003713 "transcription coactivator activity" evidence=ISS

GO:0017025 "TBP-class protein binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

MGI|MGI:3603030 Nacad "NAC alpha domain containing" [Mus musculus (taxid:10090)]

 Score = 358 (131.1 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 79/139 (56%), Positives = 95/139 (68%)

Query:     6 ELDKAVSSGGEAELHXXXXXXXXXXXXIPELEASGDPLGSAGASGLANDLVSKAKQSRGE 65
             +  +   SG  +E H             P+   S  P  + G +G   + ++KAKQSR E
Sbjct:  1302 DAQRTPGSGQRSESHGESSSELGEQDLSPQ--KSQCP--AQGPAGSNEETIAKAKQSRSE 1357

Query:    66 KKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ 125
             KKARK MSKLGL+QIQGV+R+TI+KSKNILFVI KPDVFK+PASDTY+VFGEAKIEDLSQ
Sbjct:  1358 KKARKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQ 1417

Query:   126 QAQVAAAEKFKAPEISPAA 144
             Q   AAAEKFK P   P+A
Sbjct:  1418 QVHKAAAEKFKVPS-EPSA 1435

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|O15069 NACAD "NAC-alpha domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 353 (129.3 bits), Expect = 9.4e-31, P = 9.4e-31
 Identities = 77/136 (56%), Positives = 92/136 (67%)

Query:     9 KAVSSGGEAELHXXXXXXXXXXXXIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKA 68
             +A+ SG  ++ H            +            AG S    + ++KAKQSR EKKA
Sbjct:  1361 RALGSGQHSDSHGESSAELDEQDILAPQTVQCPAQAPAGGS---EETIAKAKQSRSEKKA 1417

Query:    69 RKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQ 128
             RK MSKLGL+QIQGV+R+TI+KSKNILFVI KPDVFK+PASDTY+VFGEAKIEDLSQQ  
Sbjct:  1418 RKAMSKLGLRQIQGVTRITIQKSKNILFVIAKPDVFKSPASDTYVVFGEAKIEDLSQQVH 1477

Query:   129 VAAAEKFKAPEISPAA 144
              AAAEKFK P   P+A
Sbjct:  1478 KAAAEKFKVPS-EPSA 1492

GO:0015031 "protein transport" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

TAIR|locus:2092462 AT3G12390 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
 Identities = 66/94 (70%), Positives = 79/94 (84%)

Query:    48 ASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNP 107
             A GL  +   K+KQSR EKK+RK M KLG+K I GVSRVT++KSKNILFVI+KPDVFK+P
Sbjct:    46 ADGLDGEAGGKSKQSRSEKKSRKAMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSP 105

Query:   108 ASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEIS 141
             ASDTY++FGEAKIEDLS Q Q  AAE+FKAP++S
Sbjct:   106 ASDTYVIFGEAKIEDLSSQIQSQAAEQFKAPDLS 139

GO:0005634 "nucleus" evidence=ISM

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

WB|WBGene00022042 icd-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 69/108 (63%), Positives = 83/108 (76%)

Query:    35 ELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNI 94
             E E + +    A A+GL + +  +AKQSR EKKARK+ SKLGLKQ+ GVSRV IRKSKNI
Sbjct:    29 EQELTEEQRRVAEAAGLGDHIDKQAKQSRSEKKARKLFSKLGLKQVTGVSRVCIRKSKNI 88

Query:    95 LFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISP 142
             LFVINKPDVFK+P SDTYI+FGEAKIEDL+Q AQ++A E  K    +P
Sbjct:    89 LFVINKPDVFKSPGSDTYIIFGEAKIEDLTQHAQMSAIENLKPTREAP 136

GO:0040010 "positive regulation of growth rate" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0010171 "body morphogenesis" evidence=IMP

GO:0018996 "molting cycle, collagen and cuticulin-based cuticle" evidence=IMP

GO:0045132 "meiotic chromosome segregation" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0040011 "locomotion" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040039 "inductive cell migration" evidence=IMP

GO:0008340 "determination of adult lifespan" evidence=IMP

GO:0019915 "lipid storage" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P70670	NACAM_MOUSE	No assigned EC number	0.7083	0.7755	0.0521	yes	N/A
Q9LHG9	NACA1_ARATH	No assigned EC number	0.7065	0.6258	0.4532	yes	N/A
Q94518	NACA_DROME	No assigned EC number	0.7077	0.9795	0.6635	yes	N/A
Q5R9I9	NACA_PONAB	No assigned EC number	0.6916	0.7755	0.5302	yes	N/A
Q8AWF2	NACA_ORENI	No assigned EC number	0.6967	0.7891	0.5395	yes	N/A
A2R4V1	NACA_ASPNC	No assigned EC number	0.6612	0.4217	0.3069	yes	N/A
P38879	NACA_YEAST	No assigned EC number	0.5076	0.4353	0.3678	yes	N/A
Q5AYK0	NACA_EMENI	No assigned EC number	0.6562	0.4353	0.3152	yes	N/A
Q2U955	NACA_ASPOR	No assigned EC number	0.6562	0.4353	0.3168	yes	N/A
P0CP06	NACA_CRYNJ	No assigned EC number	0.5806	0.4217	0.3246	yes	N/A
Q68F90	NACA_XENTR	No assigned EC number	0.6691	0.8367	0.5747	yes	N/A
Q4WD81	NACA_ASPFU	No assigned EC number	0.6562	0.4353	0.3137	yes	N/A
Q6FJD5	NACA_CANGA	No assigned EC number	0.5076	0.4353	0.3878	yes	N/A
Q4I2J8	NACA_GIBZE	No assigned EC number	0.5151	0.6054	0.4258	yes	N/A
Q5E9A1	NACA_BOVIN	No assigned EC number	0.6916	0.7755	0.5302	yes	N/A
Q86S66	NACA_CAEEL	No assigned EC number	0.6173	0.7823	0.5837	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	147
pfam01849	50	pfam01849, NAC, NAC domain	7e-19
COG1308	122	COG1308, EGD2, Transcription factor homologous to	0.002

>gnl|CDD|202009 pfam01849, NAC, NAC domain

 Score = 74.5 bits (184), Expect = 7e-19
 Identities = 29/50 (58%), Positives = 35/50 (70%)

Query: 73  SKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIED 122
            KLGLK I+GV  VTIRK    + V N P V K+P S+TY+VFGEAK +D
Sbjct: 1   KKLGLKPIEGVEEVTIRKKDGKVLVFNNPKVQKSPGSNTYVVFGEAKEKD 50

Length = 50

>gnl|CDD|224227 COG1308, EGD2, Transcription factor homologous to NACalpha-BTF3 [Transcription]

 Score = 35.8 bits (83), Expect = 0.002
 Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 5/78 (6%)

Query: 66  KKARKIMSKLG--LKQIQGVSRVTIRKSKNILFVINKPDVF--KNPASDTYIVFGEAKIE 121
           +K +K+M ++G  ++++ GV RV I+       VI  P V   K     TY + G+   +
Sbjct: 9   RKLKKLMKQMGIDVEELDGVERVIIKLKDTEY-VIENPQVTVMKAMGQKTYQISGDPSAK 67

Query: 122 DLSQQAQVAAAEKFKAPE 139
           +  ++ +    ++    E
Sbjct: 68  EAVKKPEEKTVDESDISE 85

Length = 122

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
KOG2239|consensus	209		100.0
PF01849	58	NAC: NAC domain; InterPro: IPR002715 Nascent polyp	99.89
PRK06369	115	nac nascent polypeptide-associated complex protein	99.77
KOG2240|consensus	162		98.93
TIGR00264	116	alpha-NAC-related protein. This hypothetical prote	98.79
COG1308	122	EGD2 Transcription factor homologous to NACalpha-B	98.02

>KOG2239|consensus

Probab=100.00  E-value=1.7e-44  Score=295.16  Aligned_cols=130  Identities=62%  Similarity=0.893  Sum_probs=119.3

Q ss_pred             CCCCcccCCCCCCCCCCCCccccccCCCCCCcccccCCchhhhhhhhhChhHHHHHHHHHHhCCeecCCeeEEEEEecCc
Q psy2782          14 GGEAELHDDSGTESDSEDSIPELEASGDPLGSAGASGLANDLVSKAKQSRGEKKARKIMSKLGLKQIQGVSRVTIRKSKN   93 (147)
Q Consensus        14 ~~~~~~~~~s~~~sdsd~~~PeLe~~~~~~~~~~~~~~~~~~~~~~kqsr~EKKaRKaL~KLGLk~V~gI~RVtirKskn   93 (147)
                      ........+++++|+++|++|+|++++.....+.++++++++..++||||+|||+||+|.|||||+|+||+||||||+||
T Consensus        15 a~~~~~~~~~~~~~~~~ed~~d~~e~d~~~~~~~~~~~~~~~~~~akqsrsekKark~m~KLGlk~v~gV~RVti~ksKN   94 (209)
T KOG2239|consen   15 APQPQAETGSGTESDSDEDVPELEEQDSTETTDEAAEIDEEPVAKAKQSRSEKKARKAMLKLGLKQVTGVTRVTIRKSKN   94 (209)
T ss_pred             ccchhhccccCCCCcccccccccccccccccchhhhcccccchhhhhcchHHHHHHHHHHhcCCccccceeEEEEEeccc
Confidence            33445568999999999999999999854333888899999999999999999999999999999999999999999999


Q ss_pred             eEEEEeCCeeeecCCCCcEEEEccccccchHHHHHHHHHHhcCCCCCCCC
Q psy2782          94 ILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQVAAAEKFKAPEISPA  143 (147)
Q Consensus        94 ~lfvI~~PdVyksp~SnTYIVFGEak~eDlsqqaq~~Aae~~~~~~~~~~  143 (147)
                      +||+|++|||||+|+|||||||||++++||+||+|.+|+++|+.+..++.
T Consensus        95 ilfvI~kPdVyKsp~sdtYiiFGeakiedls~q~q~~aae~fk~~~~~~~  144 (209)
T KOG2239|consen   95 ILFVITKPDVYKSPASDTYIIFGEAKIEDLSQQAQMQAAERFKVPQEAPG  144 (209)
T ss_pred             EEEEecCCceeccCCCceEEEecccccchhHHHHHHHHHHhccCCccccc
Confidence            99999999999999999999999999999999999999999999876654

>PF01849 NAC: NAC domain; InterPro: IPR002715 Nascent polypeptide-associated complex (NAC) is among the first ribosome-associated entities to bind the nascent polypeptide after peptide bond formation

Probab=99.89  E-value=1e-23  Score=140.57  Aligned_cols=58  Identities=57%  Similarity=0.936  Sum_probs=49.0

Q ss_pred             HHHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccc
Q psy2782          65 EKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIED  122 (147)
Q Consensus        65 EKKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eD  122 (147)
                      |||+|++|+||||++|+||.||+|++++|.+|||++|+||+++++|||+|||+++.+|
T Consensus         1 ekk~~~~l~klgl~~i~~i~eV~i~~~dg~~~~~~~P~V~~~~~~~tyvV~G~~~~~~   58 (58)
T PF01849_consen    1 EKKLQKMLKKLGLKEIPGIEEVTIRKDDGTVFVFNNPEVQKSPGSNTYVVFGEAEEED   58 (58)
T ss_dssp             -------GHHCT-EEETTEEEEEEEETTTEEEEEESEEEEEETTCCEEEEESEEEEEE
T ss_pred             CHHHHHHHHHcCCcccCCcEEEEEEECCceEEEEcCCeEEEcCCCCEEEEEeeeEEcC
Confidence            6999999999999999999999999999999999999999999999999999999876

The nascent polypeptide-associated complex (NAC) of yeast functions in the targeting process of ribosomes to the ER membrane []. NAC may prevent binding of ribosome nascent chains (RNCs) without a signal sequence to yeast membranes.; PDB: 3MCE_D 3MCB_A 3LKX_B 1TR8_B.

>PRK06369 nac nascent polypeptide-associated complex protein; Reviewed

Probab=99.77  E-value=3.9e-19  Score=135.03  Aligned_cols=61  Identities=23%  Similarity=0.455  Sum_probs=57.9

Q ss_pred             hHHHHHHHHHHhCCe--ecCCeeEEEEEecCceEEEEeCCeee--ecCCCCcEEEEccccccchHHH
Q psy2782          64 GEKKARKIMSKLGLK--QIQGVSRVTIRKSKNILFVINKPDVF--KNPASDTYIVFGEAKIEDLSQQ  126 (147)
Q Consensus        64 ~EKKaRKaL~KLGLk--~V~gI~RVtirKskn~lfvI~~PdVy--ksp~SnTYIVFGEak~eDlsqq  126 (147)
                      ++||+|++|+||||+  +| ||+||+||+++ .+|+|++|+||  ++++++||+|||+++.+|++++
T Consensus         6 nprk~rkmmkkmGik~e~i-~v~~V~Ir~~~-~~~Vi~~P~V~~m~~~g~~tY~I~Ge~~~e~~~~~   70 (115)
T PRK06369          6 NPRKMKQMMKQMGIDVEEL-DVEEVIIRLKD-KEIVFENPQVTVMDAQGQKTYQIVGEPEEVEKEAE   70 (115)
T ss_pred             CHHHHHHHHHHcCCcchhc-CeEEEEEEeCC-EEEEEcCCeEEEEecCCCcEEEEEeccEEeecccc
Confidence            579999999999999  99 99999999999 99999999999  8999999999999999997654

>KOG2240|consensus

Probab=98.93  E-value=3.9e-10  Score=90.39  Aligned_cols=63  Identities=27%  Similarity=0.504  Sum_probs=59.7

Q ss_pred             ChhHHHHHHHHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccchH
Q psy2782          62 SRGEKKARKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLS  124 (147)
Q Consensus        62 sr~EKKaRKaL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDls  124 (147)
                      ..++||++--|+||++.+++||.+|+|+|.++.++||++|.|++|.+.|||.|.|+++.+-++
T Consensus        38 ~~ddkKlqs~lkkl~v~~i~~i~evn~~k~~g~Vihf~~~~vqasl~~nTf~ItG~~~~k~l~  100 (162)
T KOG2240|consen   38 TADDKKLQSSLKKLGVNNIPGIEEVNMFKNDGTVIHFNNPKVQASLAANTFTITGHAETKQLT  100 (162)
T ss_pred             CcccchhhhhhhhhccccccchhHhhhccccceeEecCCccccccccCCeEEEecCCcccchh
Confidence            556899999999999999999999999999999999999999999999999999999988654

>TIGR00264 alpha-NAC-related protein

Probab=98.79  E-value=1.1e-08  Score=78.30  Aligned_cols=58  Identities=26%  Similarity=0.336  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHhCCeec-CCeeEEEEEe-cCceEEEEeCCeeeecCCCCcEEEEccccccc
Q psy2782          65 EKKARKIMSKLGLKQI-QGVSRVTIRK-SKNILFVINKPDVFKNPASDTYIVFGEAKIED  122 (147)
Q Consensus        65 EKKaRKaL~KLGLk~V-~gI~RVtirK-skn~lfvI~~PdVyksp~SnTYIVFGEak~eD  122 (147)
                      =|++|++|++||++.. .+|.+|+|+. ++.++|...++.|++.++..||.|||+++.++
T Consensus        11 ~~~mkkmMk~MGi~~~eidV~~ViIk~~~k~ivf~~p~V~~m~~~G~~tYqI~G~~~~~~   70 (116)
T TIGR00264        11 LKQMQKMMKQMGMEMEDLDVEEVIIVFDDEEWIFENPKVQVMDILGVKTYQITGKPKKEK   70 (116)
T ss_pred             HHHHHHHHHHcCCCccccccEEEEEEeCCceEEEecCeeEEEecCCcEEEEEecccEEee
Confidence            3699999999998765 4599999999 56788777777889999999999999999877

This hypothetical protein is found so far only in the Archaea. Its C-terminal domain of about 40 amino acids is homologous to the C-termini of the nascent polypeptide-associated complex alpha chain (alpha-NAC) and its yeast ortholog Egd2p and to the huntingtin-interacting protein HYPK. It shows weaker similarity, possibly through shared structural constraints rather than through homology, with the amino-terminal domain of elongation factor Ts. Alpha-NAC plays a role in preventing nascent polypeptides from binding inappropriately to membrane-targeting apparatus during translation, but is also active as a transcription regulator.

>COG1308 EGD2 Transcription factor homologous to NACalpha-BTF3 [Transcription]

Probab=98.02  E-value=9e-06  Score=62.96  Aligned_cols=53  Identities=30%  Similarity=0.594  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHhC--CeecCCeeEEEEEecCceEEEEeCCeeeec--CCCCcEEEEccc
Q psy2782          65 EKKARKIMSKLG--LKQIQGVSRVTIRKSKNILFVINKPDVFKN--PASDTYIVFGEA  118 (147)
Q Consensus        65 EKKaRKaL~KLG--Lk~V~gI~RVtirKskn~lfvI~~PdVyks--p~SnTYIVFGEa  118 (147)
                      =++++++|+.||  +++++||.||.|+..++. ++|++|.||.-  .+.-||=|.|..
T Consensus         8 pr~l~k~mkqmGi~~eeld~v~~V~i~~kd~e-~vi~~P~V~~~~~~g~~~yqi~g~~   64 (122)
T COG1308           8 PRKLKKLMKQMGIDVEELDGVERVIIKLKDTE-YVIENPQVTVMKAMGQKTYQISGDP   64 (122)
T ss_pred             HHHHHHHHHHhCCCceeccCceEEEEEcCCce-EEeeCCcEEeehhcchhHHHHhcch
Confidence            378889999998  999999999999999999 99999999963  566788888884

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3lkx_B	54	Human Nac Dimerization Domain Length = 54		2e-22
3mcb_A	54	Crystal Structure Of Nac Domains Of Human Nascent P		2e-22
3mce_A	61	Crystal Structure Of The Nac Domain Of Alpha Subuni		5e-22

>pdb|3LKX|B Chain B, Human Nac Dimerization Domain Length = 54

Iteration: 1
 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 76  GLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQ 128
           GL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQQAQ
Sbjct: 2   GLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQQAQ 54

>pdb|3MCB|A Chain A, Crystal Structure Of Nac Domains Of Human Nascent Polypeptide- Associated Complex (Nac) Length = 54

Iteration: 1
 Score =  100 bits (250), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/53 (86%), Positives = 51/53 (96%)
Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLS 124
           MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLS
Sbjct: 2   MSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS 54

>pdb|3MCE|A Chain A, Crystal Structure Of The Nac Domain Of Alpha Subunit Of Nascent Polypeptide-Associated Complex(Nac) Length = 61

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/54 (85%), Positives = 51/54 (94%)
Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ 125
            SKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQ
Sbjct: 8   FSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQ 61

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
3mce_A	61	Nascent polypeptide-associated complex subunit Al;	3e-29
3mcb_A	54	Nascent polypeptide-associated complex subunit Al;	9e-28
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	5e-12

>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens} Length = 61

 Score =  100 bits (251), Expect = 3e-29
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ 125
            SKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLSQ
Sbjct: 8   FSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQ 61

>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B Length = 54

 Score = 96.7 bits (241), Expect = 9e-28
 Identities = 46/53 (86%), Positives = 51/53 (96%)

Query: 72  MSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLS 124
           MSKLGL+Q+ GV+RVTIRKSKNILFVI KPDV+K+PASDTYIVFGEAKIEDLS
Sbjct: 2   MSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS 54

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis} Length = 102

 Score = 57.7 bits (139), Expect = 5e-12
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 72  MSKLGLK--QIQGVSRVTIR-KSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQQAQ 128
           M ++G+    ++GV  V I+ K K I+    K +V +     TY V G+A+   L  + +
Sbjct: 4   MKQMGMDMKDLRGVEEVVIKLKRKEIIIKNPKVNVMEFMGQKTYQVTGKARERSLEAEME 63

Query: 129 V 129
           +
Sbjct: 64  I 64

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
3mce_A	61	Nascent polypeptide-associated complex subunit Al;	99.96
3mcb_A	54	Nascent polypeptide-associated complex subunit Al;	99.96
1tr8_A	102	Conserved protein (MTH177); chaperones, nascent po	99.76
3mcb_B	58	Transcription factor BTF3; beta-barrel like struct	99.62
3lkx_A	66	Transcription factor BTF3; beta-barrel, chaperone;	99.6

>3mce_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, homodimer, chaperone; 2.40A {Homo sapiens}

Probab=99.96  E-value=2.2e-31  Score=181.90  Aligned_cols=57  Identities=81%  Similarity=1.165  Sum_probs=52.0

Q ss_pred             HHHHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccchHH
Q psy2782          69 RKIMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ  125 (147)
Q Consensus        69 RKaL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDlsq  125 (147)
                      ||+|+||||++|+||+||||||++|++|||++||||+||+|||||||||+++||++|
T Consensus         5 ~kal~KLglk~v~gI~rVtirK~~~~lf~i~~PdV~ksp~snTyvVFGeak~ed~~q   61 (61)
T 3mce_A            5 SPEFSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLSQ   61 (61)
T ss_dssp             SCCGGGTTCEECSSEEEEEEEETTTEEEEESSCEEEEC---CEEEEESCEEEECCC-
T ss_pred             HHHHHHcCCeECCCEEEEEEEecCCEEEEECCCcEEEcCCCCeEEEEcccccccCCC
Confidence            689999999999999999999999999999999999999999999999999999986

>3mcb_A Nascent polypeptide-associated complex subunit Al; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens} PDB: 3lkx_B

Probab=99.96  E-value=3.2e-30  Score=172.30  Aligned_cols=54  Identities=85%  Similarity=1.246  Sum_probs=52.6

Q ss_pred             HHHHhCCeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccchH
Q psy2782          71 IMSKLGLKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLS  124 (147)
Q Consensus        71 aL~KLGLk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDls  124 (147)
                      ||+||||++||||+||||||++|++|||++||||+||+|||||||||+++||++
T Consensus         1 al~KLglk~v~gI~rVti~K~~~~lf~i~~P~V~ksp~s~TyvVfGeak~ed~~   54 (54)
T 3mcb_A            1 AMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTYIVFGEAKIEDLS   54 (54)
T ss_dssp             CGGGGTCEECTTEEEEEEESSSSEEEEESSCEEEECTTSSEEEEESCEEEEECC
T ss_pred             CccccCCEECCCEEEEEEEeCCCEEEEECCCcEEEcCCCCeEEEEcceeeccCC
Confidence            589999999999999999999999999999999999999999999999999985

>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}

Probab=99.76  E-value=1.8e-19  Score=132.51  Aligned_cols=53  Identities=30%  Similarity=0.490  Sum_probs=43.1

Q ss_pred             HHHHHhCC--eecCCeeEEEEEecCceEEEEeCCeeee--cCCCCcEEEEccccccch
Q psy2782          70 KIMSKLGL--KQIQGVSRVTIRKSKNILFVINKPDVFK--NPASDTYIVFGEAKIEDL  123 (147)
Q Consensus        70 KaL~KLGL--k~V~gI~RVtirKskn~lfvI~~PdVyk--sp~SnTYIVFGEak~eDl  123 (147)
                      |+|+||||  ++|+||+||+|||++ .+|||++|+||+  +|++|||+|||+++.+|+
T Consensus         2 k~lkKLGl~~~~I~gV~eV~i~k~d-~~iv~~~P~V~~~~~~~~~Ty~I~Ge~~~~d~   58 (102)
T 1tr8_A            2 SHMKQMGMDMKDLRGVEEVVIKLKR-KEIIIKNPKVNVMEFMGQKTYQVTGKARERSL   58 (102)
T ss_dssp             --------CCEEECCCCEEEEECSS-EEEEEESCEEEEEEETTEEEEEEESCEEEEEE
T ss_pred             chHHHcCCCceeCCCcEEEEEEeCC-EEEEECCCEEEEEcCCCCcEEEEEcCceeecc
Confidence            68999999  899999999999999 999999999996  999999999999999865

>3mcb_B Transcription factor BTF3; beta-barrel like structure, NAC, heterodimer, chaperone; 1.90A {Homo sapiens}

Probab=99.62  E-value=5.1e-16  Score=104.86  Aligned_cols=49  Identities=22%  Similarity=0.475  Sum_probs=46.2

Q ss_pred             CeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccchHH
Q psy2782          77 LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ  125 (147)
Q Consensus        77 Lk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDlsq  125 (147)
                      +..|+||+||+|+|.+|+++||++|+||+|+++|||+|+|.++.++|+.
T Consensus         1 v~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNTfvv~G~~e~K~l~e   49 (58)
T 3mcb_B            1 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTE   49 (58)
T ss_dssp             CCEECCCCEEEEEETTSEEEEEESCEEEEETTTTEEEEESCEEEEEGGG
T ss_pred             CcccCCeeEEEEEecCCEEEEecCcceEEeeccceEEEecCCeeeEHHH
Confidence            3579999999999999999999999999999999999999999998864

>3lkx_A Transcription factor BTF3; beta-barrel, chaperone; 2.50A {Homo sapiens}

Probab=99.60  E-value=1.2e-15  Score=105.31  Aligned_cols=49  Identities=22%  Similarity=0.475  Sum_probs=45.2

Q ss_pred             CeecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccccccchHH
Q psy2782          77 LKQIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEAKIEDLSQ  125 (147)
Q Consensus        77 Lk~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEak~eDlsq  125 (147)
                      +..|+||+||+|+|.+|+++||++|+||+|+++|||+|+|.++.++++.
T Consensus         1 v~~i~gIeEVnmfk~dg~vihF~nPkVqaS~~aNT~vv~G~~e~K~l~e   49 (66)
T 3lkx_A            1 VNNISGIEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTE   49 (66)
T ss_dssp             CEECCCEEEEEEEETTSEEEEEESCEEEEECC-CEEEEESCEEEEEGGG
T ss_pred             CcccCCeeEEEEEecCCEEEEecCcceEEeeccCeeEecCCCEEeEHHH
Confidence            3579999999999999999999999999999999999999999998764

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1eeja2	60	Disulfide bond isomerase, DsbC, N-terminal domain	83.55

>d1eeja2 d.17.3.1 (A:1-60) Disulfide bond isomerase, DsbC, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Cystatin-like
superfamily: DsbC/DsbG N-terminal domain-like
family: DsbC/DsbG N-terminal domain-like
domain: Disulfide bond isomerase, DsbC, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.55  E-value=2  Score=26.55  Aligned_cols=43  Identities=16%  Similarity=0.428  Sum_probs=30.6

Q ss_pred             HHHHHHHHHHhCCe-------ecCCeeEEEEEecCceEEEEeCCeeeecCCCCcEEEEccc
Q psy2782          65 EKKARKIMSKLGLK-------QIQGVSRVTIRKSKNILFVINKPDVFKNPASDTYIVFGEA  118 (147)
Q Consensus        65 EKKaRKaL~KLGLk-------~V~gI~RVtirKskn~lfvI~~PdVyksp~SnTYIVFGEa  118 (147)
                      |.-.|+.|.++|++       ||+|+.+|++  +++ +|       |-+ ....|+|.|+.
T Consensus         2 ea~i~~~L~~~~~~v~sV~~spi~GlyeV~~--~~~-i~-------Yvs-~dG~y~i~G~l   51 (60)
T d1eeja2           2 DAAIQQTLAKMGIKSSDIQPAPVAGMKTVLT--NSG-VL-------YIT-DDGKHIIQGPM   51 (60)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECSSTTEEEEEE--TTE-EE-------EEE-TTSCEEEESCE
T ss_pred             HHHHHHHHHhcCCceeEEecCCCCCeEEEEE--CCE-EE-------EEc-CCCCEEEEeEE
Confidence            56678899999986       6788888877  334 33       344 36679998864