Psyllid ID: psy2788

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MKATKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTTQGSQNGGATVAHRSTERRKRKMT
Secondary Structure (PSIPRED)
ccccccccccccHHHHHHHHHHccccEEEEEEcccccccccccccccccEEEEEccccccccEEEEccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHcccccEEEEEccccccccccEEEccccEEEEEEccccccEEEcccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHccccccccccccccccccccccEEEccccccccccccc
Coil and Loop (DISEMBL)
mkatknpaerpkfstlkdCLYRLTPAVMKATQncheideegklyidagdqiviiegdpechwwkgqnlstfnigmfprnimdpmrrkqpddisrplrnsvihtghgdpwgkswgspshidpmylnnpmdppdilglttqgsqnggatvahrSTERRKRKMT
Flexible Loop (DISEMBL)
mkatknpaerpkfstlkdcLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHtghgdpwgksWGSPSHIDPMYLNNPMDPPDILGLttqgsqnggatvahrsterrkrkmt
Low Complexity Region (SEG)
MKATKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTTQGSQNGGATVAHRSTERRKRKMT
Disordered region (IsUnstruct)
**************TLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNI*********************************************************************************
Disordered Region (DISOPRED)
******P***PKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPR**************************************SHIDPMYL*************************************
Disordered Region (DISEMBL)
*********RPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTTQG*********************
Disordered Region (DISPRO)
*******AERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP***KQ*DDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTT***********************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKATKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTTQGSQNGGATVAHRSTERRKRKMT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
Q5U2X5	1040	Activated CDC42 kinase 1	yes	N/A	0.832	0.128	0.456	7e-28
O54967	1055	Activated CDC42 kinase 1	yes	N/A	0.832	0.127	0.456	7e-28
Q17R13	1039	Activated CDC42 kinase 1	yes	N/A	0.832	0.128	0.456	1e-27
Q07912	1038	Activated CDC42 kinase 1	yes	N/A	0.832	0.129	0.456	1e-27
Q10925	1237	Probable tyrosine-protein	yes	N/A	0.739	0.096	0.292	2e-10
Q99ML2	666	Non-receptor tyrosine-pro	no	N/A	0.428	0.103	0.402	2e-06
Q13470	666	Non-receptor tyrosine-pro	no	N/A	0.428	0.103	0.376	1e-05
P52735	878	Guanine nucleotide exchan	no	N/A	0.496	0.091	0.341	0.0002
Q08DN7	844	Proto-oncogene vav OS=Bos	no	N/A	0.316	0.060	0.352	0.0004
Q9I7F7	1337	Tyrosine-protein kinase P	no	N/A	0.664	0.080	0.307	0.0005

>sp|Q5U2X5|ACK1_RAT Activated CDC42 kinase 1 OS=Rattus norvegicus GN=Tnk2 PE=2 SV=1

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
            P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+G
Sbjct: 371 KPEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRG 427

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYL 124
           QN  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL
Sbjct: 428 QNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYL 487

Query: 125 NNPMDPPDILGLTTQGSQ 142
            NPMDPPD+L +    S+
Sbjct: 488 GNPMDPPDLLSVELSTSR 505

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.
Rattus norvegicus (taxid: 10116)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O54967|ACK1_MOUSE Activated CDC42 kinase 1 OS=Mus musculus GN=Tnk2 PE=1 SV=2

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
            P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+G
Sbjct: 371 KPEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRG 427

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYL 124
           QN  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL
Sbjct: 428 QNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYL 487

Query: 125 NNPMDPPDILGLTTQGSQ 142
            NPMDPPD+L +    S+
Sbjct: 488 GNPMDPPDLLSVELSTSR 505

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q17R13|ACK1_BOVIN Activated CDC42 kinase 1 OS=Bos taurus GN=TNK2 PE=1 SV=1

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
            P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+G
Sbjct: 371 KPEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRG 427

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYL 124
           QN  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL
Sbjct: 428 QNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDKIDELYL 487

Query: 125 NNPMDPPDILGLTTQGSQ 142
            NPMDPPD+L +    S+
Sbjct: 488 GNPMDPPDLLSVELSTSR 505

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q07912|ACK1_HUMAN Activated CDC42 kinase 1 OS=Homo sapiens GN=TNK2 PE=1 SV=3

 Score =  122 bits (306), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/138 (45%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
            P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+G
Sbjct: 371 KPEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRG 427

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYL 124
           QN  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL
Sbjct: 428 QNTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYL 487

Query: 125 NNPMDPPDILGLTTQGSQ 142
            NPMDPPD+L +    S+
Sbjct: 488 GNPMDPPDLLSVELSTSR 505

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q10925|KIN25_CAEEL Probable tyrosine-protein kinase kin-25 OS=Caenorhabditis elegans GN=kin-25 PE=2 SV=2

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 72/171 (42%), Gaps = 52/171 (30%)

Query: 6   NPAERPKFSTLKDCLYR--LTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWW 63
           NPAER KF  +++ L       AV + T N     + G L +  GD++V++E   +   W
Sbjct: 349 NPAERCKFGAIREDLVAAMFLDAVARETYNS---IQPGALQLTKGDEVVVVENTGQD--W 403

Query: 64  KGQNLSTFNIGMFPRNI-------------------------------------MDPMRR 86
            GQN      G FPR++                                     + P+  
Sbjct: 404 FGQNKKNQKFGTFPRSVVFAQTNNAVAAATAVTPQKVPTAPTIRIPPSHPPPAPLKPLNN 463

Query: 87  K-------QPDDISRPLRNSVIHTGHGDPW-GKSWGSPSHIDPMYLNNPMD 129
                   +   IS P+  S IHTGHGDP  G+SWG+P+ I  MYL NP++
Sbjct: 464 NTKTSLNDRTSKISMPVAGSFIHTGHGDPLGGQSWGNPATIADMYLKNPVN 514

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q99ML2|TNK1_MOUSE Non-receptor tyrosine-protein kinase TNK1 OS=Mus musculus GN=Tnk1 PE=1 SV=2

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 3/72 (4%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
           +PA+RP FS L+  L     A +   +   E+ E G L ++ GD I IIEG  +   WKG
Sbjct: 364 HPADRPSFSNLEGLLQE---AWLSEGRCVREVTEPGALRMEPGDPITIIEGSLDTATWKG 420

Query: 66  QNLSTFNIGMFP 77
           QN  T  +G FP
Sbjct: 421 QNGRTLKVGNFP 432

May function in signaling pathways utilized broadly during fetal development and more selectively in adult tissues and in cells of the lymphohematopoietic system. Could specifically be involved in phospholipid signal transduction (By similarity). Involved in negative regulation of cell growth. Has tumor suppressor properties. Plays a negative regulatory role in the Ras-MAPK pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q13470|TNK1_HUMAN Non-receptor tyrosine-protein kinase TNK1 OS=Homo sapiens GN=TNK1 PE=1 SV=3

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 8/77 (10%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-----PEC 60
           +PA+RP FS L+  L    P+     +   ++ E G L ++ GD I +IEG      P+ 
Sbjct: 363 HPADRPSFSHLEGLLQEAGPSEACCVR---DVTEPGALRMETGDPITVIEGSSSFHSPDS 419

Query: 61  HWWKGQNLSTFNIGMFP 77
             WKGQN  TF +G FP
Sbjct: 420 TIWKGQNGRTFKVGSFP 436

Involved in negative regulation of cell growth. Has tumor suppressor properties. Plays a negative regulatory role in the Ras-MAPK pathway. May function in signaling pathways utilized broadly during fetal development and more selectively in adult tissues and in cells of the lymphohematopoietic system. Could specifically be involved in phospholipid signal transduction.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|P52735|VAV2_HUMAN Guanine nucleotide exchange factor VAV2 OS=Homo sapiens GN=VAV2 PE=1 SV=2

 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 5/85 (5%)

Query: 28  MKATQNCH-EIDEEGK--LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
           M A QN H      GK  L    GD + ++ GDPE  WW+G+ + T   G FP + + P 
Sbjct: 591 MVAMQNYHGNPAPPGKPVLTFQTGDVLELLRGDPESPWWEGRLVQTRKSGYFPSSSVKPC 650

Query: 85  RRKQPDDISRPLRNSVIHTGHGDPW 109
                  ISRP    + +T +  PW
Sbjct: 651 PVDGRPPISRPPSREIDYTAY--PW 673

Guanine nucleotide exchange factor for the Rho family of Ras-related GTPases. Plays an important role in angiogenesis. Its recruitment by phosphorylated EPHA2 is critical for EFNA1-induced RAC1 GTPase activation and vascular endothelial cell migration and assembly.

Homo sapiens (taxid: 9606)

>sp|Q08DN7|VAV_BOVIN Proto-oncogene vav OS=Bos taurus GN=VAV1 PE=2 SV=1

 Score = 43.9 bits (102), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 31/51 (60%)

Query: 43  LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDIS 93
           L ++ GD + + + + E +WW+G+N+ST  +G FP N + P     P D+S
Sbjct: 616 LRLNPGDIVELTKAEAEQNWWEGRNISTNEVGWFPCNRVKPYVHGPPQDLS 666

Couples tyrosine kinase signals with the activation of the Rho/Rac GTPases, thus leading to cell differentiation and/or proliferation.

Bos taurus (taxid: 9913)

>sp|Q9I7F7|PR2_DROME Tyrosine-protein kinase PR2 OS=Drosophila melanogaster GN=PR2 PE=1 SV=3

 Score = 43.9 bits (102), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 57/130 (43%), Gaps = 23/130 (17%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
           + A+RP+F  + D L  + P  +KA  NC E  ++  LY   GD I +++ +    +WKG
Sbjct: 382 DAAKRPRFGEIYDQLPDMKPEQLKAVVNCTEPKKDHLLY-RQGDIISVLDRNTGTPFWKG 440

Query: 66  QNLSTFNIGMF------------PRNIMDPMRRKQPDDIS-RPLRNSVI--------HTG 104
             LST   G F            P +  D   R     IS R LR  +I        HTG
Sbjct: 441 V-LSTGKTGYFNPSNTVAFLEGLPSSTRDSFSRVSDHRISKRKLRTEMISKPQNDFKHTG 499

Query: 105 HGDPWGKSWG 114
           H    G ++G
Sbjct: 500 HVGIDGATFG 509

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
383854452	1255	PREDICTED: uncharacterized protein LOC10	0.813	0.104	0.597	8e-44
345480556	1308	PREDICTED: activated CDC42 kinase 1-like	0.813	0.100	0.597	1e-43
380018959	1245	PREDICTED: uncharacterized protein LOC10	0.819	0.106	0.586	9e-43
307207705	1463	Activated CDC42 kinase 1 [Harpegnathos s	0.944	0.103	0.541	1e-42
328788715	1238	PREDICTED: hypothetical protein LOC41305	0.819	0.106	0.578	3e-42
322789077	622	hypothetical protein SINV_07793 [Solenop	0.795	0.205	0.610	1e-41
340726655	1251	PREDICTED: hypothetical protein LOC10064	0.813	0.104	0.574	4e-41
350418446	1251	PREDICTED: hypothetical protein LOC10074	0.813	0.104	0.574	4e-41
332030748	1498	Activated CDC42 kinase 1 [Acromyrmex ech	0.838	0.090	0.572	6e-41
91089789	1000	PREDICTED: similar to protein kinase pro	0.801	0.129	0.590	3e-39

>gi|383854452|ref|XP_003702735.1| PREDICTED: uncharacterized protein LOC100875070 [Megachile rotundata]

 Score =  181 bits (459), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 104/134 (77%), Gaps = 3/134 (2%)

Query: 5   KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
           + P+ERP F++L+  L  + PAVMKA  +  E D   K+ I+ GDQIVI++G PE +WWK
Sbjct: 354 REPSERPTFASLRTSLTGMVPAVMKAVNHFEETD---KMTIEQGDQIVILDGRPENYWWK 410

Query: 65  GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYL 124
           GQN  TF IG+FPR ++DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSP +ID +YL
Sbjct: 411 GQNQRTFQIGLFPRCLVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPIYIDDVYL 470

Query: 125 NNPMDPPDILGLTT 138
            NPM+PPD++G+ T
Sbjct: 471 RNPMEPPDVVGVAT 484

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480556|ref|XP_001604712.2| PREDICTED: activated CDC42 kinase 1-like [Nasonia vitripennis]

 Score =  180 bits (457), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 80/134 (59%), Positives = 105/134 (78%), Gaps = 3/134 (2%)

Query: 4   TKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWW 63
            ++PAERP F++LK+ L  + P+VMKA    +  DE  K+ I+ GDQIVII+G PE +WW
Sbjct: 353 ARDPAERPTFASLKESLTGMVPSVMKA---LNRFDEPDKMMIEHGDQIVIIDGRPENYWW 409

Query: 64  KGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMY 123
           KGQN  TF +G+FPR ++DPMR+KQP+DIS+PL NS IHTGHG P+GKSWGSP  ID +Y
Sbjct: 410 KGQNQRTFQVGVFPRCLVDPMRKKQPEDISKPLENSFIHTGHGAPFGKSWGSPIFIDDVY 469

Query: 124 LNNPMDPPDILGLT 137
           L NPM+PPD++G+T
Sbjct: 470 LRNPMEPPDVVGVT 483

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018959|ref|XP_003693386.1| PREDICTED: uncharacterized protein LOC100866491 [Apis florea]

 Score =  177 bits (450), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 78/133 (58%), Positives = 102/133 (76%), Gaps = 1/133 (0%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
           +P+ERP F++L+  L  + P VMKA  +   + + GK+ I  GDQI+I++G PE +WWKG
Sbjct: 353 DPSERPTFASLRVSLTSMVPTVMKAI-SSFAVSDPGKMTIKQGDQIIILDGQPENYWWKG 411

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLN 125
           QN  TF IG+FPR  +DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSP+ ID +YL 
Sbjct: 412 QNQRTFQIGLFPRCYVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPTFIDDVYLR 471

Query: 126 NPMDPPDILGLTT 138
           NPM+PPDI+G+T 
Sbjct: 472 NPMEPPDIVGVTV 484

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207705|gb|EFN85342.1| Activated CDC42 kinase 1 [Harpegnathos saltator]

 Score =  177 bits (449), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 84/155 (54%), Positives = 109/155 (70%), Gaps = 3/155 (1%)

Query: 4   TKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWW 63
           ++ P+ERP F +LK+ L  + PAVMKA    +  +E GK+ I++GDQIVII+G  E +WW
Sbjct: 394 SREPSERPTFGSLKESLTGMMPAVMKAV---NAFEEAGKMSIESGDQIVIIDGRSENYWW 450

Query: 64  KGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMY 123
           KGQN  TF +  FPR ++DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSPS ID +Y
Sbjct: 451 KGQNQRTFQVAHFPRCLVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPSFIDDVY 510

Query: 124 LNNPMDPPDILGLTTQGSQNGGATVAHRSTERRKR 158
           L NPMDPPDIL  T+          ++ +   RK+
Sbjct: 511 LRNPMDPPDILVATSTAENQLKKRFSYGTQRARKQ 545

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788715|ref|XP_396503.4| PREDICTED: hypothetical protein LOC413052 [Apis mellifera]

 Score =  176 bits (445), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 101/133 (75%), Gaps = 1/133 (0%)

Query: 6   NPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKG 65
           +P+ERP F++L+  L  + P VMKA  +   + + GK+ I  GDQI+I++G PE +WWKG
Sbjct: 353 DPSERPTFASLRVSLTSMVPTVMKAI-SSFAVSDPGKMTIKQGDQIIILDGQPENYWWKG 411

Query: 66  QNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLN 125
           QN  TF IG+FPR  +DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSP+ ID +YL 
Sbjct: 412 QNQRTFQIGLFPRCYVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPTFIDDVYLR 471

Query: 126 NPMDPPDILGLTT 138
           NPM+PPDI+G+  
Sbjct: 472 NPMEPPDIVGVAV 484

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789077|gb|EFZ14520.1| hypothetical protein SINV_07793 [Solenopsis invicta]

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 80/131 (61%), Positives = 100/131 (76%), Gaps = 3/131 (2%)

Query: 4   TKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWW 63
            + P+ERP F++LK+ L  + P+VMKA       +E GK+ I+ GDQIVII+G  E +WW
Sbjct: 353 AREPSERPTFASLKESLTGMVPSVMKALT---AFEETGKMSIEPGDQIVIIDGRSENYWW 409

Query: 64  KGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMY 123
           KGQN  TF IG FPR ++DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSP +ID +Y
Sbjct: 410 KGQNQRTFQIGHFPRCLVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPVYIDDVY 469

Query: 124 LNNPMDPPDIL 134
           L NPMDPPD+L
Sbjct: 470 LRNPMDPPDVL 480

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726655|ref|XP_003401670.1| PREDICTED: hypothetical protein LOC100647202 [Bombus terrestris]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/134 (57%), Positives = 100/134 (74%), Gaps = 3/134 (2%)

Query: 5   KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
           + P+ERP F++LK  L  + P VMKA  +       GK+ I+ GDQIVI++G PE +WWK
Sbjct: 354 REPSERPTFASLKSSLTGMVPTVMKAISH---FTMAGKMTIEQGDQIVILDGRPENYWWK 410

Query: 65  GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYL 124
           GQN  +F IG+FPR  +DPMRRKQ +DIS+PL NS IHTGHG P+GKSWGSP +ID +YL
Sbjct: 411 GQNQRSFQIGLFPRCFVDPMRRKQREDISKPLENSFIHTGHGAPFGKSWGSPIYIDDVYL 470

Query: 125 NNPMDPPDILGLTT 138
            NPM+PPD++G+T 
Sbjct: 471 RNPMEPPDVVGVTV 484

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418446|ref|XP_003491859.1| PREDICTED: hypothetical protein LOC100747574 [Bombus impatiens]

 Score =  172 bits (436), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 77/134 (57%), Positives = 100/134 (74%), Gaps = 3/134 (2%)

Query: 5   KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
           + P+ERP F++LK  L  + P VMKA  +       GK+ I+ GDQIVI++G PE +WWK
Sbjct: 354 REPSERPTFASLKSSLTGMVPTVMKAISH---FTMAGKMTIEQGDQIVILDGRPENYWWK 410

Query: 65  GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYL 124
           GQN  +F IG+FPR  +DPMRRKQ +DIS+PL NS IHTGHG P+GKSWGSP +ID +YL
Sbjct: 411 GQNQRSFQIGLFPRCFVDPMRRKQREDISKPLENSFIHTGHGAPFGKSWGSPIYIDDVYL 470

Query: 125 NNPMDPPDILGLTT 138
            NPM+PPD++G+T 
Sbjct: 471 RNPMEPPDVVGVTV 484

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030748|gb|EGI70424.1| Activated CDC42 kinase 1 [Acromyrmex echinatior]

 Score =  172 bits (435), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 79/138 (57%), Positives = 102/138 (73%), Gaps = 3/138 (2%)

Query: 5   KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
           + P+ERP F++LK+ L  + P+VMKA     E D   K+ I++GDQI II+G  E +WWK
Sbjct: 354 REPSERPTFASLKESLTGMVPSVMKALTTFEETD---KMSIESGDQIAIIDGRSENYWWK 410

Query: 65  GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYL 124
           GQN  TF I  FPR ++DPMRRKQP+DIS+PL NS IHTGHG P+GKSWGSP +ID +YL
Sbjct: 411 GQNQRTFQIAHFPRCLVDPMRRKQPEDISKPLENSFIHTGHGAPFGKSWGSPVYIDDVYL 470

Query: 125 NNPMDPPDILGLTTQGSQ 142
            NPMDPPD+L  ++  +Q
Sbjct: 471 RNPMDPPDVLVASSVDNQ 488

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91089789|ref|XP_968303.1| PREDICTED: similar to protein kinase protein [Tribolium castaneum] gi|270013600|gb|EFA10048.1| hypothetical protein TcasGA2_TC012222 [Tribolium castaneum]

 Score =  166 bits (420), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 78/132 (59%), Positives = 96/132 (72%), Gaps = 3/132 (2%)

Query: 5   KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
           KNP ERP F+ LK+   +    VMKA       DE  KL I+ GD+I II+G  E +WWK
Sbjct: 355 KNPTERPTFAALKEFFRKNKTPVMKAVGGQ---DEPNKLKIEEGDEIAIIDGSAELYWWK 411

Query: 65  GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYL 124
           GQN  TF IG+F R ++DPMR KQP+DIS+PL+NS IHTGHG  +G+SWGSPS+ID MYL
Sbjct: 412 GQNQRTFEIGLFARCLVDPMRPKQPEDISKPLQNSFIHTGHGSAFGESWGSPSYIDDMYL 471

Query: 125 NNPMDPPDILGL 136
            NPM+PPD+LGL
Sbjct: 472 RNPMEPPDVLGL 483

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
ZFIN|ZDB-GENE-091118-85	992	tnk2a "tyrosine kinase, non-re	0.782	0.127	0.507	1.1e-29
ZFIN|ZDB-GENE-110411-165	1066	tnk2b "tyrosine kinase, non-re	0.795	0.120	0.492	2.4e-28
UNIPROTKB|F6PN06	828	BT.64988 "Uncharacterized prot	0.826	0.160	0.459	2.9e-27
UNIPROTKB|D4A6C1	1008	Tnk2 "Activated CDC42 kinase 1	0.826	0.131	0.459	3.3e-27
UNIPROTKB|Q07912	1038	TNK2 "Activated CDC42 kinase 1	0.826	0.128	0.459	3.4e-27
UNIPROTKB|C9J1X3	1040	TNK2 "Activated CDC42 kinase 1	0.826	0.127	0.459	3.5e-27
RGD|1305957	1040	Tnk2 "tyrosine kinase, non-rec	0.826	0.127	0.459	3.5e-27
UNIPROTKB|Q5U2X5	1040	Tnk2 "Activated CDC42 kinase 1	0.826	0.127	0.459	3.5e-27
MGI|MGI:1858308	1055	Tnk2 "tyrosine kinase, non-rec	0.826	0.126	0.459	3.5e-27
UNIPROTKB|D4ADJ2	1055	Tnk2 "Activated CDC42 kinase 1	0.826	0.126	0.459	3.5e-27

ZFIN|ZDB-GENE-091118-85 tnk2a "tyrosine kinase, non-receptor, 2a" [Danio rerio (taxid:7955)]

 Score = 340 (124.7 bits), Expect = 1.1e-29, P = 1.1e-29
 Identities = 67/132 (50%), Positives = 84/132 (63%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F +L+D L    P  M+A Q   + DE  KL I   D I IIEG  E +WW+GQ
Sbjct:   367 PEDRPTFVSLRDFLVETMPTDMRALQ---DFDEPDKLKIHTNDIITIIEGRAENYWWRGQ 423

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGD--PWGKSWGSPSHIDPMYL 124
             N  T  +G FPRN++  +      DISRPL++S IHTGHGD  P  +SWG+P  ID +YL
Sbjct:   424 NRQTMKVGQFPRNVVTSVAGLSAQDISRPLKHSFIHTGHGDTDPH-RSWGAPDKIDDLYL 482

Query:   125 NNPMDPPDILGL 136
              NPMDPPD+LGL
Sbjct:   483 GNPMDPPDVLGL 494

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

ZFIN|ZDB-GENE-110411-165 tnk2b "tyrosine kinase, non-receptor, 2b" [Danio rerio (taxid:7955)]

 Score = 328 (120.5 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 66/134 (49%), Positives = 81/134 (60%)

Query:     5 KNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWK 64
             + P +RP F  L++ L    P  M+A Q   + DE  KL I   D I IIEG  E +WW+
Sbjct:   367 QKPDDRPTFVALREFLVETMPTDMRALQ---DFDEPDKLQIQMDDVITIIEGRAENYWWR 423

Query:    65 GQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGD--PWGKSWGSPSHIDPM 122
             GQN  T  +G FPRN +  +      DISRPL+NS IHTGHGD  P  + WG P  ID +
Sbjct:   424 GQNKRTLKVGQFPRNTVTSVAGLSAHDISRPLKNSFIHTGHGDTNPH-RCWGFPDRIDDL 482

Query:   123 YLNNPMDPPDILGL 136
             YL NPMDPPD+LGL
Sbjct:   483 YLGNPMDPPDVLGL 496

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F6PN06 BT.64988 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 316 (116.3 bits), Expect = 2.9e-27, P = 2.9e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDKIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|D4A6C1 Tnk2 "Activated CDC42 kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 317 (116.6 bits), Expect = 3.3e-27, P = 3.3e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q07912 TNK2 "Activated CDC42 kinase 1" [Homo sapiens (taxid:9606)]

 Score = 317 (116.6 bits), Expect = 3.4e-27, P = 3.4e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005768 "endosome" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IDA

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IDA

GO:0030136 "clathrin-coated vesicle" evidence=IDA

GO:0005905 "coated pit" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005095 "GTPase inhibitor activity" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0050699 "WW domain binding" evidence=ISS

GO:0005154 "epidermal growth factor receptor binding" evidence=IDA

GO:0070436 "Grb2-EGFR complex" evidence=IDA

UNIPROTKB|C9J1X3 TNK2 "Activated CDC42 kinase 1" [Homo sapiens (taxid:9606)]

 Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   404 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 460

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   461 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 520

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   521 NPMDPPDLLSVELSTSR 537

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|1305957 Tnk2 "tyrosine kinase, non-receptor, 2" [Rattus norvegicus (taxid:10116)]

 Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA;ISO

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;ISO

GO:0005154 "epidermal growth factor receptor binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005905 "coated pit" evidence=IEA;ISO

GO:0016310 "phosphorylation" evidence=ISO

GO:0030136 "clathrin-coated vesicle" evidence=IEA;ISO

GO:0030424 "axon" evidence=IEA;ISO

GO:0030425 "dendrite" evidence=IEA;ISO

GO:0030426 "growth cone" evidence=IEA;ISO

GO:0043025 "neuronal cell body" evidence=IEA;ISO

GO:0050699 "WW domain binding" evidence=ISO

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA;ISO

GO:0070436 "Grb2-EGFR complex" evidence=IEA;ISO

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IEA;ISO

UNIPROTKB|Q5U2X5 Tnk2 "Activated CDC42 kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0005768 "endosome" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005905 "coated pit" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0016310 "phosphorylation" evidence=ISS

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

MGI|MGI:1858308 Tnk2 "tyrosine kinase, non-receptor, 2" [Mus musculus (taxid:10090)]

 Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=ISO

GO:0004713 "protein tyrosine kinase activity" evidence=ISO

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=IDA

GO:0005886 "plasma membrane" evidence=ISO;IDA

GO:0005905 "coated pit" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=ISO

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=ISO

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=IDA

GO:0030426 "growth cone" evidence=IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0046872 "metal ion binding" evidence=IEA

GO:0050699 "WW domain binding" evidence=IPI

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=ISO

GO:0070436 "Grb2-EGFR complex" evidence=ISO

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=ISO

UNIPROTKB|D4ADJ2 Tnk2 "Activated CDC42 kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 317 (116.6 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 63/137 (45%), Positives = 82/137 (59%)

Query:     7 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
             P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct:   372 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 428

Query:    67 NLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLN 125
             N  T  +G FPRN++  +      DIS+PL+NS IHTGHGD   +  WG P  ID +YL 
Sbjct:   429 NTRTLCVGPFPRNVVTSVAGLSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLG 488

Query:   126 NPMDPPDILGLTTQGSQ 142
             NPMDPPD+L +    S+
Sbjct:   489 NPMDPPDLLSVELSTSR 505

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0070436 "Grb2-EGFR complex" evidence=IEA

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	161
pfam09027	66	pfam09027, GTPase_binding, GTPase binding	2e-09
cd11981	62	cd11981, SH3_VAV3_1, First Src homology 3 domain o	4e-06
cd11831	62	cd11831, SH3_VAV_1, First Src homology 3 domain of	2e-05
smart00326	56	smart00326, SH3, Src homology 3 domains	3e-05
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	2e-04
cd11979	63	cd11979, SH3_VAV1_1, First Src homology 3 domain o	4e-04
cd11886	55	cd11886, SH3_BOI, Src Homology 3 domain of fungal	6e-04
cd12005	54	cd12005, SH3_Lck, Src homology 3 domain of Lck Pro	6e-04
cd11980	60	cd11980, SH3_VAV2_1, First Src homology 3 domain o	0.001
pfam00018	47	pfam00018, SH3_1, SH3 domain	0.001
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	0.001
cd11949	53	cd11949, SH3_GRB2_C, C-terminal Src homology 3 dom	0.002
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	0.003

>gnl|CDD|117593 pfam09027, GTPase_binding, GTPase binding

 Score = 50.7 bits (121), Expect = 2e-09
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 3/46 (6%)

Query: 91  DISRPLRNSVIHTGHGDPWGKS-WGSPSHIDPMYLNNPMDPPDILG 135
           DIS PL+N  IHTG GD   +S WG P   + +YL   MDPPD+  
Sbjct: 7   DISVPLKNGFIHTGQGDSNPRSCWGFPDEFENLYLG--MDPPDMAY 50

The GTPase binding domain binds to the G protein Cdc42, inhibiting both its intrinsic and stimulated GTPase activity. The domain is largely unstructured in the absence of Cdc42. Length = 66

>gnl|CDD|212914 cd11981, SH3_VAV3_1, First Src homology 3 domain of VAV3 protein

 Score = 41.8 bits (98), Expect = 4e-06
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 43 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
          L    GD I ++  DP   +W+G+NL+T  +G FP + + P
Sbjct: 22 LNAQIGDTIEVLYADPHSLFWQGRNLTTGELGFFPSDAVKP 62

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|212765 cd11831, SH3_VAV_1, First Src homology 3 domain of VAV proteins

 Score = 39.9 bits (93), Expect = 2e-05
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 28 MKATQNCHEI-----DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD 82
          M   QN H            L +  GD + +++GD E  WW+G+N++T  +G FP + + 
Sbjct: 2  MVVMQNYHGNPPPPGAGGPVLTLQTGDVVELLKGDAESPWWEGRNVATREVGYFPSSSVK 61

Query: 83 P 83
          P
Sbjct: 62 P 62

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 39.4 bits (93), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +  +L    GD I ++E   +  WWKG+       G+FP N
Sbjct: 14 QDPDELSFKKGDIITVLE-KSDDGWWKGRLGRG-KEGLFPSN 53

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 37.4 bits (88), Expect = 2e-04
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           ++ +L    GD I ++E D +  WW+G+       G+FP N
Sbjct: 11 QDDDELSFKKGDIITVLEKDDD-GWWEGELNGG-REGLFPAN 50

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212912 cd11979, SH3_VAV1_1, First Src homology 3 domain of VAV1 protein

 Score = 36.5 bits (84), Expect = 4e-04
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 43 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
          L ++ GD + + + + E +WW+G+N ST  IG FP N + P
Sbjct: 22 LRLNPGDIVELTKAEAEQNWWEGRNTSTNEIGWFPCNRVKP 62

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The first SH3 domain of Vav1 has been shown to bind the adaptor protein Grb2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 63

>gnl|CDD|212819 cd11886, SH3_BOI, Src Homology 3 domain of fungal BOI-like proteins

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 40 EGKLYIDAGDQIVIIEGDPECH--WWKGQNLSTFNIGMFPRN 79
          E +L +  GD+I +IE D E    W+ G+NL T   G+FP  
Sbjct: 13 EDELTLKPGDKIELIEDDEEFGDGWYLGRNLRTGETGLFPVV 54

This subfamily includes the Saccharomyces cerevisiae proteins BOI1 and BOI2, and similar proteins. They contain an N-terminal SH3 domain, a Sterile alpha motif (SAM), and a Pleckstrin homology (PH) domain at the C-terminus. BOI1 and BOI2 interact with the SH3 domain of Bem1p, a protein involved in bud formation. They promote polarized cell growth and participates in the NoCut signaling pathway, which is involved in the control of cytokinesis. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212938 cd12005, SH3_Lck, Src homology 3 domain of Lck Protein Tyrosine Kinase

 Score = 36.0 bits (83), Expect = 6e-04
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 35 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +E   +G L  + G+++ I+E   E  WWK Q+L+T   G  P N
Sbjct: 8  YEPSHDGDLGFEKGEKLRILEQSGE--WWKAQSLTTGQEGFIPFN 50

Lck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212913 cd11980, SH3_VAV2_1, First Src homology 3 domain of VAV2 protein

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 28 MKATQNCH-EIDEEGK--LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
          M A QN H      GK  L    GD I ++ GDP+  WW+G+ L T   G FP + + P
Sbjct: 2  MVAVQNYHGNPAPPGKPVLTFQTGDVIELLRGDPDSPWWEGRLLQTKKSGYFPSSSVKP 60

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 35.2 bits (82), Expect = 0.001
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFP 77
          E  +L    GD I+++E   +  WWKG+       G+ P
Sbjct: 10 EPDELSFKKGDIIIVLE-KSDDGWWKGRLK-GGKEGLIP 46

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 35 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          ++  E+ ++    GD I  IE   E  WW G N +    G+FP N
Sbjct: 8  YQAAEDNEISFVEGDIITQIEQIDE-GWWLGVN-AKGQKGLFPAN 50

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212882 cd11949, SH3_GRB2_C, C-terminal Src homology 3 domain of Growth factor receptor-bound protein 2

 Score = 34.8 bits (80), Expect = 0.002
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 3/45 (6%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
          E+G+L    GD I +++ + + +WWKG        GMFPRN + P
Sbjct: 12 EDGELGFRRGDFIEVMD-NSDPNWWKGACHG--QTGMFPRNYVTP 53

GRB2 is a critical signaling molecule that regulates the Ras pathway by linking tyrosine kinases to the Ras guanine nucleotide releasing protein Sos (son of sevenless), which converts Ras to the active GTP-bound state. It is ubiquitously expressed in all tissues throughout development and is important in cell cycle progression, motility, morphogenesis, and angiogenesis. In lymphocytes, GRB2 is associated with antigen receptor signaling components. GRB2 contains an N-terminal SH3 domain, a central SH2 domain, and a C-terminal SH3 domain. The C-terminal SH3 domain of GRB2 binds to Gab2 (Grb2-associated binder 2) through epitopes containing RxxK motifs, as well as to the proline-rich C-terminus of FGRF2. SH3 domains are protein interaction domains that typically bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 34.1 bits (79), Expect = 0.003
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 40 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +  L    GD++ I++ D +  WW  ++LST   G  P N
Sbjct: 13 DDDLSFKKGDRLQILD-DSDGDWWLARHLSTGKEGYIPSN 51

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
KOG0199|consensus	1039		99.93
KOG2996|consensus	865		99.57
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.51
PF09027	66	GTPase_binding: GTPase binding; InterPro: IPR01511	99.5
KOG2199|consensus	462		99.44
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.38
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.32
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.24
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.17
KOG1029|consensus	1118		99.13
KOG4792|consensus	293		99.06
KOG4226|consensus	379		98.99
KOG4226|consensus	379		98.99
KOG1118|consensus	366		98.99
KOG2070|consensus	661		98.99
KOG4225|consensus	489		98.96
KOG2856|consensus	472		98.91
KOG4225|consensus	489		98.85
KOG2996|consensus	865		98.82
KOG0162|consensus	1106		98.75
KOG1843|consensus	473		98.73
KOG4348|consensus	627		98.69
KOG3601|consensus	222		98.65
KOG3655|consensus	484		98.6
KOG1029|consensus	1118		98.31
KOG1264|consensus	1267		98.3
KOG4278|consensus	1157		98.29
KOG2546|consensus	483		98.27
KOG4348|consensus	627		98.21
KOG3875|consensus	362		98.06
KOG3523|consensus	695		97.93
KOG0515|consensus	752		97.93
KOG1702|consensus	264		97.79
KOG2528|consensus	490		97.76
KOG3775|consensus	482		97.74
KOG0197|consensus	468		97.63
KOG4575|consensus	874		97.45
KOG4429|consensus	421		97.14
KOG3771|consensus	460		97.11
KOG2222|consensus	848		96.82
KOG1451|consensus	812		96.81
KOG3557|consensus	721		96.76
KOG0609|consensus	542		96.65
KOG3632|consensus	1335		96.56
KOG4792|consensus	293		96.26
KOG4773|consensus	386		96.06
KOG3632|consensus	1335		94.65
KOG3812|consensus	475		93.76
KOG3565|consensus	640		93.34
KOG3705|consensus	580		93.08
PF11302	75	DUF3104: Protein of unknown function (DUF3104); In	93.07
KOG3725|consensus	375		92.65
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	91.47
KOG3601|consensus	222		91.31
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	87.13

>KOG0199|consensus

Probab=99.93  E-value=1.1e-25  Score=209.00  Aligned_cols=133  Identities=29%  Similarity=0.446  Sum_probs=122.9

Q ss_pred             CCCCCCCCChhhhH--HHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCe
Q psy2788           4 TKNPAERPKFSTLK--DCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM   81 (161)
Q Consensus         4 ~~~P~~RP~F~~l~--~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V   81 (161)
                      +|+|+|||||++|+  .+|.++.|..++++||   +.+++.|.|++||.|+|||++..++||+|||.||+++|.||++.|
T Consensus       353 ah~paDRptFsair~~~~l~eaqp~~a~~~~d---~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvv  429 (1039)
T KOG0199|consen  353 AHNPADRPTFSAIREDLVLAEAQPAVARETYD---SIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVV  429 (1039)
T ss_pred             cCCccccccHHHHHHhHHHHhcCCceeeeecc---ccCCCceeeccCCeEEEEecCCccceeeccccccceecccCccee
Confidence            79999999999996  7889999999999999   889999999999999999999999999999999999999999999


Q ss_pred             eecCCCCCCCccccccccccccCCCCCC--CCCCCCC-CCCCccccCCCCCCccccCCcccc
Q psy2788          82 DPMRRKQPDDISRPLRNSVIHTGHGDPW--GKSWGSP-SHIDPMYLNNPMDPPDILGLTTQG  140 (161)
Q Consensus        82 ~p~~~~~~~~IS~P~~~S~ihtghg~~~--g~~wG~p-~~idd~y~~~Pm~pp~~~~~~l~~  140 (161)
                      . ...++...++.++..+++||||+...  .++|+.+ ++++..|+.+|++|+|.+-++|..
T Consensus       430 t-~a~lga~pa~~~~t~~~vhtg~~~rg~~~h~~~~~~dr~~~nll~sppdrgd~rsm~l~g  490 (1039)
T KOG0199|consen  430 T-AATLGAVPAATAVTPQKVHTGPTIRGPPSHPPPAPLDRLNNNLLTSPPDRGDKRSMPLAG  490 (1039)
T ss_pred             e-ecccCCCCccccCccccccCCCCCCCCCCCCCCCCcchhhhhcccCCCCccccccccccC
Confidence            8 66677888999999999999998773  5899999 899999999999999998888554

>KOG2996|consensus

Probab=99.57  E-value=1.2e-15  Score=139.64  Aligned_cols=108  Identities=25%  Similarity=0.444  Sum_probs=90.1

Q ss_pred             ceEEEecccCCCCCC-----CCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccc
Q psy2788          26 AVMKATQNCHEIDEE-----GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSV  100 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~-----~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~  100 (161)
                      +.|.+++.|+..+.|     -.|.++.||++..+.+.+++.||.|+|..++++|+||++.|.|++.-..+.-+.|+..|.
T Consensus       605 pkm~~vq~ysg~p~Pag~igP~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~  684 (865)
T KOG2996|consen  605 PKMDVVQNYSGIPPPAGSIGPRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSE  684 (865)
T ss_pred             cchhhhhccCCCCCCCccCCCceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhh
Confidence            567788887766544     269999999999999999999999999999999999999999987433222244666665


Q ss_pred             cccCCCCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCeeEeeehhHHh
Q psy2788         101 IHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGATVAHRSTERR  156 (161)
Q Consensus       101 ihtghg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r~~~~~  156 (161)
                                +.|          ++++||+   ++++  |.++.|||||||+|++|+.
T Consensus       685 ----------~~W----------yaG~MER---aqaes~Lk~~~ngT~LVR~r~kea~  719 (865)
T KOG2996|consen  685 ----------FPW----------YAGEMER---AQAESTLKNRPNGTYLVRYRTKEAK  719 (865)
T ss_pred             ----------hhh----------hcchHhh---hhhhhHhhcCCCceEEEEecccchh
Confidence                      677          9999999   8888  9999999999999999875

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.51  E-value=1.2e-14  Score=93.61  Aligned_cols=49  Identities=33%  Similarity=0.657  Sum_probs=41.6

Q ss_pred             EecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          30 ATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        30 Al~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      |+++ |.+.++++|+|++||+|.|++.. +.+||.|++  +++.|+||+|||+
T Consensus         1 Al~~-y~~~~~dELs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYD-YEAQDPDELSFKKGDVITVLEKS-DDGWWYGRN--TGRTGLFPANYVE   49 (49)
T ss_dssp             ESSC-BCSSSTTB-EB-TTEEEEEEEES-STSEEEEEE--TTEEEEEEGGGEE
T ss_pred             CCcc-CCCCCcCEeeEcCCCEEEEEEeC-CCCEEEEEE--CCEEEEECHHhCC
Confidence            6788 66788899999999999999865 468999997  8999999999996

...

>PF09027 GTPase_binding: GTPase binding; InterPro: IPR015116 The GTPase binding domain binds to the G protein Cdc42, inhibiting both its intrinsic and stimulated GTPase activity

Probab=99.50  E-value=4.4e-15  Score=101.44  Aligned_cols=50  Identities=50%  Similarity=0.764  Sum_probs=12.9

Q ss_pred             CCCCCccccccccccccCCCCCC-CCCCCCCCCCCccccCCCCCCccccCCcc
Q psy2788          87 KQPDDISRPLRNSVIHTGHGDPW-GKSWGSPSHIDPMYLNNPMDPPDILGLTT  138 (161)
Q Consensus        87 ~~~~~IS~P~~~S~ihtghg~~~-g~~wG~p~~idd~y~~~Pm~pp~~~~~~l  138 (161)
                      ...++||.|+++||+|+|||+.. .+|||.++.||++||.  |+||+++.+.+
T Consensus         3 ~aaqeIs~PLk~sFlH~Ghg~~~~k~~Wg~~~~idn~yl~--mdp~~~~~~~~   53 (66)
T PF09027_consen    3 VAAQEISVPLKNSFLHTGHGMGNPKTCWGSPSEIDNNYLN--MDPIDMAYNLN   53 (66)
T ss_dssp             SSSTT---S-SS------------SS---SS----TTT---------------
T ss_pred             cchhhhcccccccccccCCcCCCCccccCChhhhhhhhhc--ccccchhhccc
Confidence            45789999999999999999995 6899999999999999  99999998863

The domain is largely unstructured in the absence of Cdc42 []. ; PDB: 1CF4_B.

>KOG2199|consensus

Probab=99.44  E-value=2.2e-14  Score=126.48  Aligned_cols=57  Identities=32%  Similarity=0.642  Sum_probs=50.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..|||||| |++.|+++|+|++||||+|+|.. +.+||+|.+.  +.+|+||+|||++.-
T Consensus       215 ~rkVRALYD-FeAaE~nELsFkaGdIItVLd~s-~~~WWKG~~~--~~~GlFPsnfVT~~l  271 (462)
T KOG2199|consen  215 VRKVRALYD-FEAAEDNELSFKAGDIITVLDDS-DPNWWKGENH--RGIGLFPSNFVTADL  271 (462)
T ss_pred             chhhhhhhc-ccccCCCccceecCcEEEEcccC-CcchhccccC--Ccccccchhhhhhhh
Confidence            478999999 88899999999999999999965 4689999985  468999999999754

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.38  E-value=4e-13  Score=87.62  Aligned_cols=54  Identities=26%  Similarity=0.562  Sum_probs=44.7

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEE-ecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVII-EGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vi-d~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|++| |....+++|+|++||+|.|+ +...+ .||.|++  +++.|+||+++|+++
T Consensus         1 ~~~a~~d-~~~~~~~~Ls~~~Gd~i~v~~~~~~~-~ww~~~~--~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen    1 YYRAIFD-YVAEDPDELSFKKGDVIEVLGEKDDD-GWWLGEN--NGRRGWFPSSYVEEI   55 (55)
T ss_dssp             EEEESSS-BESSSTTB-EB-TTEEEEEEEEECST-SEEEEEE--TTEEEEEEGGGEEEH
T ss_pred             CEEEeEE-ECCCCCCceEEecCCEEEEEEeecCC-CEEEEEE--CCcEEEEcHHHEEEC
Confidence            3789999 66778899999999999999 65554 7999998  789999999999874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.32  E-value=1.4e-12  Score=82.77  Aligned_cols=48  Identities=29%  Similarity=0.542  Sum_probs=42.3

Q ss_pred             EEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecC
Q psy2788          29 KATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPR   78 (161)
Q Consensus        29 rAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~   78 (161)
                      +|+|+ |.+.++++|+|++||+|.|++...+ .||+|++..+++.|+||+
T Consensus         1 ~Alyd-f~~~~~~eLs~~~Gd~i~v~~~~~~-~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYD-FDAEDPDELSFKKGDIIEVLEKSDD-GWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSC-BETSSTTBSEB-TTEEEEEEEESSS-SEEEEEETTTTEEEEEEG
T ss_pred             CCCee-eCCCCCCEEeEECCCEEEEEEecCC-CEEEEEECCCCcEEEeeC
Confidence            58999 6678899999999999999997764 899999998899999995

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>smart00326 SH3 Src homology 3 domains

Probab=99.24  E-value=2e-11  Score=77.04  Aligned_cols=55  Identities=25%  Similarity=0.518  Sum_probs=47.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..++|+++ |....+++|+|++||+|.|++.. +.+||.+++.. ++.|+||.+||..
T Consensus         3 ~~~~a~~~-~~~~~~~~l~~~~Gd~v~v~~~~-~~~w~~~~~~~-~~~G~vP~~~v~~   57 (58)
T smart00326        3 PQVRALYD-YTAQDPDELSFKKGDIITVLEKS-DDGWWKGRLGR-GKEGLFPSNYVEE   57 (58)
T ss_pred             cEEEEeee-eCCCCCCCCCCCCCCEEEEEEcC-CCCeEEEEeCC-CCEEEEchHHEEE
Confidence            56789999 55677899999999999999976 46899999864 8999999999875

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.17  E-value=7.1e-11  Score=73.82  Aligned_cols=53  Identities=26%  Similarity=0.614  Sum_probs=44.6

Q ss_pred             EEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          28 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        28 vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ++|+++ |....+++|+|++||+|.|++.. +.+||.+++..+ +.|+||.+||++
T Consensus         2 ~~a~~~-~~~~~~~~l~~~~Gd~v~v~~~~-~~~w~~~~~~~~-~~G~vP~~~v~~   54 (54)
T cd00174           2 VRALYD-YDARDPDELSFKKGDIIEVLEKS-DDGWWEGRLLGG-KRGLFPSNYVEE   54 (54)
T ss_pred             EEEEEe-eCCCCCCCCCCCCCCEEEEEEcC-CCCeEEEEECCC-CEEEEccccCcC
Confidence            578999 55677789999999999999974 357999998655 899999999863

>KOG1029|consensus

Probab=99.13  E-value=3.5e-11  Score=113.25  Aligned_cols=56  Identities=27%  Similarity=0.545  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+|.|+|| |.++.+|+|+|.+||+|.|+++. |..||+|.  ++|+.|+||+|||.++.
T Consensus      1054 ~qviamYd-Y~AqndDELsF~kgdiI~Vlnkd-epeWW~Ge--~ng~sGLFPSNYV~k~t 1109 (1118)
T KOG1029|consen 1054 CQVIAMYD-YEAQNDDELSFKKGDIINVLNKD-EPEWWSGE--RNGKSGLFPSNYVQKQT 1109 (1118)
T ss_pred             ceeEEeec-cccCCcccccccCCCEEEecCCC-Chhhhccc--ccCccccCccccccccc
Confidence            57889999 77899999999999999999965 56799998  46999999999998764

>KOG4792|consensus

Probab=99.06  E-value=1.6e-10  Score=96.47  Aligned_cols=59  Identities=22%  Similarity=0.406  Sum_probs=50.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      .+|+|++| |...+..+|.|++|++++|+++. +.+||..+|. .|++|++|.+||+....-
T Consensus       125 ~~vr~~fd-F~G~deeDLPFkkGeiL~I~~K~-eeqWW~Arns-~Gk~GmIPvpYVe~~~~~  183 (293)
T KOG4792|consen  125 EYVRALFD-FNGNDEEDLPFKKGEILRIRDKP-EEQWWNARNS-EGKRGMIPVPYVEKYRPA  183 (293)
T ss_pred             hheeeeec-cCCCccccCCcccCcEEEEecCc-HHHhhhhhcc-CCcccceechHHHhhhhh
Confidence            57889999 65677889999999999999965 5689999995 799999999999976643

>KOG4226|consensus

Probab=98.99  E-value=6.7e-10  Score=94.91  Aligned_cols=59  Identities=22%  Similarity=0.501  Sum_probs=49.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..|+|||. |......+|+|++||++.|||+- .|.+||+.+|. .|++|+.|+|||..+..
T Consensus       192 ~vVvaLYs-FsssndeELsFeKGerleivd~Pe~DPdWwkarn~-~G~vGLVPrNYv~vl~d  251 (379)
T KOG4226|consen  192 HVVVALYS-FSSSNDEELSFEKGERLEIVDKPENDPDWWKARNA-RGQVGLVPRNYVVVLSD  251 (379)
T ss_pred             EEEEEEec-ccCCChhhcccccCceeEeccCCCCCchHHhhccc-CCccceeecceEEEecc
Confidence            56789998 65566679999999999999963 35679999996 68999999999997653

>KOG4226|consensus

Probab=98.99  E-value=4.2e-10  Score=96.15  Aligned_cols=54  Identities=30%  Similarity=0.667  Sum_probs=45.6

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      .|..|+-.|.   ++.+++|+|.+|+.|+|+|+..| +||+|+-  +|++||||+|||+.
T Consensus       108 t~AvVKf~Y~---a~~eDELsLtKGtrv~vmEKssD-GWWrG~~--ng~VGWFPSNYv~E  161 (379)
T KOG4226|consen  108 TPAVVKFNYV---AEREDELSLTKGTRVTVMEKSSD-GWWRGSY--NGQVGWFPSNYVTE  161 (379)
T ss_pred             CceEEEEeec---cccccccccccCcEEEEEEeccC-cceeccc--CCeeccccccceeh
Confidence            3555554444   78889999999999999999987 6999995  79999999999974

>KOG1118|consensus

Probab=98.99  E-value=3.4e-10  Score=97.60  Aligned_cols=57  Identities=26%  Similarity=0.490  Sum_probs=50.1

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      -+.+||+|| |+.+..++|.|++||+|+|+.... .+||.|..  .|+.|+||.|||+++.
T Consensus       306 ~p~cralYd-FepenEgEL~fkeGDlI~l~~QId-enWyeG~~--~g~sG~FPvnYv~vlv  362 (366)
T KOG1118|consen  306 QPCCRALYD-FEPENEGELDFKEGDLITLTNQID-ENWYEGEK--HGESGMFPVNYVEVLV  362 (366)
T ss_pred             chhheeeec-cCCCCCCccCcccCceeeehhhcC-cchhhhee--cCccCccccceeEEec
Confidence            478999999 777778999999999999999665 58999984  6789999999999875

>KOG2070|consensus

Probab=98.99  E-value=2.5e-10  Score=103.52  Aligned_cols=58  Identities=28%  Similarity=0.559  Sum_probs=49.3

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .|-.|||-+. |.....|+|+|.+||+|+|.... |++||.|..  +|++||||+|||.-+.
T Consensus        16 ~pLvvrAkf~-F~gsNnDELsf~KgDvItVTq~e-eGGWWEGTl--ng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   16 NPLVVRAKFN-FQGSNNDELSFSKGDVITVTQVE-EGGWWEGTL--NGRTGWFPSNYVREIK   73 (661)
T ss_pred             CceEEEEEee-cccCCCceeccccCCEEEEEEec-cCcceeccc--cCccCccchHHHHHHh
Confidence            4788999998 65667789999999999999854 678999985  6889999999998653

>KOG4225|consensus

Probab=98.96  E-value=4.1e-10  Score=100.60  Aligned_cols=58  Identities=26%  Similarity=0.441  Sum_probs=52.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      |-.+||||. |..+.+++|+|+.||||-|+++..| .|.-|...|||++|.||.|||+++
T Consensus       432 ~l~yrAly~-Y~pqnedeLEl~egDii~VmeKcdd-gWfvGts~rtg~fGtFPgnyV~~~  489 (489)
T KOG4225|consen  432 PLKYRALYS-YRPQNEDELELREGDIIDVMEKCDD-GWFVGTSRRTGKFGTFPGNYVKRL  489 (489)
T ss_pred             cccceeccc-cCCCCchhheeccCCEEeeeecccC-cceeccceecccccccCccccccC
Confidence            456899998 7788999999999999999999876 699998889999999999999864

>KOG2856|consensus

Probab=98.91  E-value=2.8e-10  Score=100.11  Aligned_cols=57  Identities=25%  Similarity=0.428  Sum_probs=51.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .-|+|||| |...|.++|+|++||.|++++...+.+|-+|+.. +|++|+||+|||+.+
T Consensus       415 v~vraLYD-Y~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~-~G~vGLyPAnYVe~~  471 (472)
T KOG2856|consen  415 VRVRALYD-YAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLD-SGRVGLYPANYVECI  471 (472)
T ss_pred             eeEEeeec-cCcccccchhhccccHhhhcCCcccccccccccc-CCcccccchhhhhcc
Confidence            56889999 7778899999999999999998888999999974 799999999999864

>KOG4225|consensus

Probab=98.85  E-value=3.5e-09  Score=94.67  Aligned_cols=56  Identities=20%  Similarity=0.444  Sum_probs=49.0

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      .++|+|+ |+.+.+.+|.|.+||||.|+.+.. .+|..|.  .+|++|+||+|||+++..
T Consensus       232 ~aralf~-F~~qt~kEL~~~kGDIVyI~rkvD-~nWyeGE--hhGr~GifP~sYvE~~~~  287 (489)
T KOG4225|consen  232 AARALFD-FEAQTPKELPFNKGDIVYILRKVD-QNWYEGE--HHGRVGIFPASYVEILTP  287 (489)
T ss_pred             hhhheec-cccCCccccccCCCCEEEEEeecc-Cceeeee--ecceecceechheeecCc
Confidence            3689999 778888999999999999999765 5899998  479999999999998764

>KOG2996|consensus

Probab=98.82  E-value=2.7e-09  Score=98.55  Aligned_cols=55  Identities=24%  Similarity=0.430  Sum_probs=44.6

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCC-CCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPE-CHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e-~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .+.|-|| |.+.+-.+|+|++||+|.|+++..+ .+||+|+.  +|++||||++||++-
T Consensus       807 ~AvarYd-f~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGev--ngrvGwFPstYVee~  862 (865)
T KOG2996|consen  807 TAVARYD-FCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEV--NGRVGWFPSTYVEED  862 (865)
T ss_pred             eeeeccc-cCCCchhhcccccCCEEEEehhccccCceeccee--cCccccccccccccc
Confidence            3456666 4455556899999999999997654 89999995  689999999999974

>KOG0162|consensus

Probab=98.75  E-value=6.1e-09  Score=98.11  Aligned_cols=55  Identities=29%  Similarity=0.516  Sum_probs=48.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +.+.|+|+ |..+++++|+|++||+|.|+...+ ++||.|+.  .++.||||.|||+++
T Consensus      1052 p~~~A~Y~-y~gq~~dEls~~~~diIei~~edp-SGWw~gk~--~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1052 PVCEALYD-YPGQDVDELSFKKGDIIEIMREDP-SGWWLGKL--NGKEGLFPGNYVTEY 1106 (1106)
T ss_pred             cceeeecc-CCCCCcccccccCCCEEEEeccCC-Ccchhhcc--CCccccccccccccC
Confidence            56889999 667888999999999999999887 57999994  689999999999863

>KOG1843|consensus

Probab=98.73  E-value=5.9e-09  Score=92.68  Aligned_cols=56  Identities=27%  Similarity=0.554  Sum_probs=49.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeee
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      |.++.|+|+ |..+++++|.|++||||+|+++.. ..+||.|+.  .++.|+||+|||++
T Consensus       416 ~n~a~a~ys-fage~~GDl~f~kgDii~il~ks~s~~dwwtgr~--~~~egifPanyv~~  472 (473)
T KOG1843|consen  416 PNIATALYS-FAGEQPGDLSFQKGDIITILKKSDSANDWWTGRG--NGYEGIFPANYVSL  472 (473)
T ss_pred             cceeeeeeh-hccCCCCCcccccCceEEEecCCcchhhHHHhhc--cccccccccceecc
Confidence            568999998 777899999999999999999753 478999984  68999999999976

>KOG4348|consensus

Probab=98.69  E-value=3.7e-09  Score=94.96  Aligned_cols=57  Identities=28%  Similarity=0.520  Sum_probs=47.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++++|. |..+..++|+|++||+|.|+..- |.+||+|..  +|++|+||+|+|+-...
T Consensus       101 r~c~v~f~-Y~pqndDELelkVGDiIeli~eV-EeGWw~G~L--ngk~GmFPsNFVkel~~  157 (627)
T KOG4348|consen  101 RICVVTFA-YSPQNDDELELKVGDIIELISEV-EEGWWKGKL--NGKVGMFPSNFVKELPT  157 (627)
T ss_pred             eeEEEEEe-ecCCCCceeeeeeccHHHhhhHh-hhhhhhcee--cCcccccchhhceecCC
Confidence            45678887 54677899999999999999854 568999996  58999999999986543

>KOG3601|consensus

Probab=98.65  E-value=1.3e-08  Score=83.77  Aligned_cols=56  Identities=23%  Similarity=0.494  Sum_probs=48.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |+..++++|.|+.||+|+|++... ..||+|+.  -|+.|+||++||.|+.
T Consensus       164 ~yqQa~~d-f~~~pp~ql~f~~gq~~~v~~~ss-~~ww~Gs~--lg~agiFpagyv~p~d  219 (222)
T KOG3601|consen  164 YYQQALYD-FQPQPPGQLAFRRGQQIQVLDSSS-PFWWFGSK--LGRAGIFPAGYVAPSD  219 (222)
T ss_pred             hhhhhcCC-CCCCCchhhccccCCcceeecCCC-cchhhccc--cCceeeecCccccccc
Confidence            46789999 777788999999999999999754 68999994  6889999999999874

>KOG3655|consensus

Probab=98.60  E-value=2e-08  Score=90.43  Aligned_cols=57  Identities=25%  Similarity=0.556  Sum_probs=49.8

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      -|..++|+|| |++.+..+++|..+|+|++||.-+ .+||.|+- ..|++|+||+|||+-
T Consensus       426 ~~q~A~A~~d-yqAAddtEisf~p~d~it~Id~vd-egww~g~~-pdG~~glfPaNyV~l  482 (484)
T KOG3655|consen  426 EPQTARALYD-YQAADDTEISFDPPDAITLIDQVD-EGWWTGQG-PDGEVGLFPANYVEL  482 (484)
T ss_pred             cCCCcccccc-ccccCCcccccCCccccccccccC-CccccccC-CCCCcCccccccccc
Confidence            4677889999 767788899999999999999766 58999997 578999999999974

>KOG1029|consensus

Probab=98.31  E-value=6.2e-07  Score=85.16  Aligned_cols=56  Identities=32%  Similarity=0.608  Sum_probs=47.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCC-CeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN-IMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n-~V~p~~   85 (161)
                      +++-|+|.|+++.|+++|.|..||.|.|+++..  .||.|.  ++++.|+||+| ||.|+.
T Consensus       906 eq~ya~~~~~e~vEq~dlt~~egd~iLvtekdg--eww~gt--~~~r~gifPan~y~r~~~  962 (1118)
T KOG1029|consen  906 EQLYAVYPYFEAVEQGDLTFHEGDEILVTEKDG--EWWTGT--CGDREGIFPANYYVRPKD  962 (1118)
T ss_pred             ceeEEEecccccccCCCccccccceEEEeeccC--ceeccc--cCCccccccccceeeehh
Confidence            567788888888899999999999999999875  499998  47889999999 666654

>KOG1264|consensus

Probab=98.30  E-value=5e-07  Score=86.31  Aligned_cols=57  Identities=19%  Similarity=0.359  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|||+ |.+..+++|+|-+|-+|+++++.. +.||+|.-+ +...++||+|||+.+.
T Consensus       775 vt~kAL~~-Yka~r~DELSFpk~aiItnv~kee-g~wWrGdYG-g~iq~wfPsnyVeei~  831 (1267)
T KOG1264|consen  775 VTVKALYD-YKAKRSDELSFPKGAIITNVSKEE-GGWWRGDYG-GRIQQWFPSNYVEEIS  831 (1267)
T ss_pred             hhhhhhhc-cccCCcccccccccceeEeeeccC-Cceeecccc-cceeeeccHHHhhhhc
Confidence            56789999 668889999999999999999775 679999864 4567999999999775

>KOG4278|consensus

Probab=98.29  E-value=1.1e-06  Score=82.87  Aligned_cols=96  Identities=18%  Similarity=0.354  Sum_probs=75.6

Q ss_pred             hcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCcccccccccc
Q psy2788          22 RLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVI  101 (161)
Q Consensus        22 ~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~i  101 (161)
                      ++.|....|||| |-+..++.|++.+||.+-|+-..-.+.|-..|. .+|+ ||.|+||++|+.             |+ 
T Consensus        87 endpNLFVALYD-FvasGdntLSitKGeklRvLGYN~NgEWcEart-KNGq-GWVPSNyItPvN-------------SL-  149 (1157)
T KOG4278|consen   87 ENDPNLFVALYD-FVASGDNTLSITKGEKLRVLGYNKNGEWCEART-KNGQ-GWVPSNYITPVN-------------SL-  149 (1157)
T ss_pred             cCCCceeEeeee-eeccccceeeeecCceEEEeeecCCCcceeecc-cCCC-cccccccccccc-------------ch-
Confidence            456888899999 435666789999999999998665556888886 5788 999999999984             22 


Q ss_pred             ccCCCCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCeeEeeehhH
Q psy2788         102 HTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGATVAHRSTE  154 (161)
Q Consensus       102 htghg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r~~~  154 (161)
                             ...+|          +.+|+.+   -.++  |++--||.||||+-++.
T Consensus       150 -------eKhsW----------YHGpvSR---saaEy~LsSgInGSFLVRESEsS  184 (1157)
T KOG4278|consen  150 -------EKHSW----------YHGPVSR---SAAEYILSSGINGSFLVRESESS  184 (1157)
T ss_pred             -------hhccc----------ccCcccc---chhhhhhhcCcccceEEeeccCC
Confidence                   23678          8899987   4444  99999999999876543

>KOG2546|consensus

Probab=98.27  E-value=3.5e-07  Score=81.85  Aligned_cols=65  Identities=20%  Similarity=0.488  Sum_probs=52.3

Q ss_pred             CChhhhHHHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          11 PKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        11 P~F~~l~~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      |.|+ =+.+|     +.|+|+|| |.....++|+|..|-+|.|+.+. +.+||.|..  .+-.|+||.|||+|+.
T Consensus       415 p~w~-p~syL-----EkVv~iyd-y~~~KddeLsf~E~ailyv~kkn-ddgw~EgV~--~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  415 PAWV-PTSYL-----EKVVAIYD-YTADKDDELSFAEGAILYVLKKN-DDGWYEGVQ--DGVTGLFPGNYVEPLK  479 (483)
T ss_pred             cccc-cHHHH-----HHHHhhcc-cccccccccccccccEEEEEEec-CCcchhhee--cCcceeccCccccccc
Confidence            5554 23455     67899999 44778899999999999999974 568999974  5668999999999975

>KOG4348|consensus

Probab=98.21  E-value=9.5e-07  Score=79.72  Aligned_cols=54  Identities=22%  Similarity=0.556  Sum_probs=46.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      +++|.++. |+.+..++|.|+.||+|+.|.+. .|.+||.|..  +|+.|+||-|+|+
T Consensus       262 eycrv~F~-Ye~qndDELt~KEgdil~lItK~cgdaGWweGEL--nGk~GvFPDNFv~  316 (627)
T KOG4348|consen  262 EYCRVKFV-YEPQNDDELTLKEGDILILITKNCGDAGWWEGEL--NGKKGVFPDNFVE  316 (627)
T ss_pred             hheeeeee-ecCCCccceeeccccEEEEecccccccceeeeee--cCccccCCchhhh
Confidence            45677776 77888899999999999999753 5688999995  6899999999996

>KOG3875|consensus

Probab=98.06  E-value=6.7e-07  Score=77.52  Aligned_cols=60  Identities=18%  Similarity=0.295  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC----CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~----~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..+||+|| |-+..|.||+|++||++.|.-+.    ....||..+....+.+|+||.|||+-+.+
T Consensus       269 ~~arA~Yd-F~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  269 EFARALYD-FVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHHhh-hhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            56789999 65677789999999999999643    23559999976589999999999997765

>KOG3523|consensus

Probab=97.93  E-value=2.1e-06  Score=79.68  Aligned_cols=76  Identities=14%  Similarity=0.358  Sum_probs=58.9

Q ss_pred             CCCCCCCChhh-hHHHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788           5 KNPAERPKFST-LKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus         5 ~~P~~RP~F~~-l~~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      .-|..++++.+ |.+..   -=++|+++.. |.+.++|+|+|+.+|++-|+.+.+| +|.+|...+.|..||||..||+-
T Consensus       590 l~p~~~~~~~~~i~e~~---dcpQv~~~~s-y~a~q~Del~Le~~Dvv~v~~k~~D-GWl~GeRl~Dge~GWFP~~~vee  664 (695)
T KOG3523|consen  590 LRPPSSTKPPEKIYEEW---DCPQVQCVHS-YKAKQPDELTLELADVVNVLQKTPD-GWLEGERLRDGERGWFPSSYVEE  664 (695)
T ss_pred             cCCCCCCCChhhhhhcc---CCChhheeec-cccCCCceeeeehhhhhhhhhcCCC-ccccccccccCccCcchHHHHHH
Confidence            34555555554 22211   1267778887 6588999999999999999999987 69999988999999999999986


Q ss_pred             cC
Q psy2788          84 MR   85 (161)
Q Consensus        84 ~~   85 (161)
                      +.
T Consensus       665 I~  666 (695)
T KOG3523|consen  665 IT  666 (695)
T ss_pred             hc
Confidence            53

>KOG0515|consensus

Probab=97.93  E-value=6.1e-06  Score=76.11  Aligned_cols=59  Identities=31%  Similarity=0.478  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      -.|-|++| |+++-.|+|+|+.||.+|||+..  .|..||-.++  +++.|+.|+||+.-++++
T Consensus       684 G~vYAlwd-Yeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~l--ng~eGyVPRnylgLyPri  744 (752)
T KOG0515|consen  684 GVVYALWD-YEAQFEDELSFDEGDELTVIRRDDEVETEWWWARL--NGEEGYVPRNYLGLYPRI  744 (752)
T ss_pred             ceeEEeec-ccccccccccccCCceeEEEecCCcchhhhhhHhh--cCcccccchhhhhcCccc
Confidence            56779999 77777899999999999999863  3578999995  689999999999877643

>KOG1702|consensus

Probab=97.79  E-value=1.5e-05  Score=65.97  Aligned_cols=55  Identities=24%  Similarity=0.370  Sum_probs=47.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      ...+|+|| |.+++.++++|+-||.|.-+....+ +|-.|...+||..|+.|+|||+
T Consensus       208 ktyra~yd-ysaqdedevsF~dgd~ivnvq~idd-GWmygtv~rtg~tGmlpaNyie  262 (264)
T KOG1702|consen  208 KTYRAFYD-YSAQDEDEVSFVDGDYIVNVQSIDD-GWMYGTVVRTGWTGMLPANYIE  262 (264)
T ss_pred             ccchhhcc-CcccCcceeEEecCCeEEEEEeccC-CceeeEEEeccccCCCchhhee
Confidence            56789999 6577889999999999988876655 5999988899999999999987

>KOG2528|consensus

Probab=97.76  E-value=1.6e-05  Score=71.67  Aligned_cols=58  Identities=22%  Similarity=0.345  Sum_probs=47.6

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      .+||+|| |..+-.++|++..||++.|.....-..||.|+|. .|..|+||++||+.++.
T Consensus         4 k~RamyD-f~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Ns-rge~GlfPa~yVeV~~~   61 (490)
T KOG2528|consen    4 KARAMYD-FQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNS-RGERGLFPASYVEVTRL   61 (490)
T ss_pred             chhhhcc-hhhcccccccccccceeeecCcccccccccCCCc-cCccCCCcccceeeecc
Confidence            5688898 4334457999999999999987766789999996 68999999999996653

>KOG3775|consensus

Probab=97.74  E-value=1.4e-05  Score=71.09  Aligned_cols=56  Identities=23%  Similarity=0.451  Sum_probs=46.3

Q ss_pred             EEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          28 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        28 vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      -||+.. |-...+++|.|+.||-|.| +...|..|..|.|.|||+.|+||+.|+.-+.
T Consensus       265 HR~~~r-FvPRHpDELeLEIgDav~V-e~eadD~W~~G~NlRTG~~GIFPA~ya~evd  320 (482)
T KOG3775|consen  265 HRAVFR-FVPRHPDELELEIGDAVLV-EAEADDFWFEGFNLRTGERGIFPAFYAHEVD  320 (482)
T ss_pred             hhhhhh-ccCCCcceeeeecCCeeEe-eecccchhhccccccccccccccceeEEecC
Confidence            357776 4357889999999999855 5567778999999999999999999987654

>KOG0197|consensus

Probab=97.63  E-value=5.2e-05  Score=69.02  Aligned_cols=58  Identities=21%  Similarity=0.445  Sum_probs=48.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCE-EEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQ-IVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDi-I~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..+.|+++ |....+.+|+|.+||+ -.|++ ..+..||+.+...++..|+.|.|||....
T Consensus        12 ~~~valyd-~~s~~~~dLsf~~Gd~~~~~~~-~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~   70 (468)
T KOG0197|consen   12 TIVVALYD-YASRTPEDLSFRKGDVVLILLE-TTNGDWWRARSLQLGQEGYIPSNYVARNR   70 (468)
T ss_pred             ceEEEecc-ccCCCccccccccCceEEEeec-cCChhHHHHHHhhcCCCCcCcCceeeccc
Confidence            57889999 6677789999999999 55555 44568999998778999999999999864

>KOG4575|consensus

Probab=97.45  E-value=0.00014  Score=68.33  Aligned_cols=58  Identities=24%  Similarity=0.411  Sum_probs=45.4

Q ss_pred             cCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          23 LTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        23 ~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      ..|..|+|+|. ...+..++|.|-.||+|+++. ..++-||-+....+...|+||.|+|.
T Consensus         6 q~p~~vrA~y~-w~ge~eGdl~f~egDlie~tr-I~dgkwwi~lhrNk~~~g~fpsNFvh   63 (874)
T KOG4575|consen    6 QLPCMVRALYA-WPGEREGDLKFTEGDLIEQTR-IEDGKWWILLHRNKDEDGLFPSNFVH   63 (874)
T ss_pred             CCCceEEeecc-CCCCcccccceecccceeEEe-eccceeeeeeeecccccccCccccee
Confidence            45788999997 656777999999999999998 44455666654336778999999994

>KOG4429|consensus

Probab=97.14  E-value=0.0004  Score=60.44  Aligned_cols=72  Identities=17%  Similarity=0.110  Sum_probs=54.5

Q ss_pred             CCCCCCCCC-C--CChhhhHHHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceec
Q psy2788           1 MKATKNPAE-R--PKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFP   77 (161)
Q Consensus         1 ~~~~~~P~~-R--P~F~~l~~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP   77 (161)
                      |.|+.+|-- |  |-.+++...|-+       |+|. |.+.+.++|....||++++-+... ..||.|+.  .++.|-||
T Consensus       343 m~aqsapgSpr~a~~aaelek~lcd-------afYS-fqarqddel~~e~gditif~Ekke-eg~~f~rl--~gd~~hf~  411 (421)
T KOG4429|consen  343 MEAQSAPGSPRGAGEAAELEKILCD-------AFYS-FQARQDDELGGEIGDITIFDEKKE-EGPTFCRL--LGDFEHFH  411 (421)
T ss_pred             ccccCCCCCCCCCccHHHHHHHHhh-------hhhc-cccccccccCCcccceeeecCccc-CCCceeee--ccccCCCc
Confidence            345555433 4  446667776655       7887 667788999999999988877664 57999996  58999999


Q ss_pred             CCCeee
Q psy2788          78 RNIMDP   83 (161)
Q Consensus        78 ~n~V~p   83 (161)
                      +.||+.
T Consensus       412 Aa~iEe  417 (421)
T KOG4429|consen  412 AAEIEE  417 (421)
T ss_pred             HHHHHH
Confidence            999874

>KOG3771|consensus

Probab=97.11  E-value=0.00027  Score=64.08  Aligned_cols=54  Identities=19%  Similarity=0.098  Sum_probs=44.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      ..|.|++| |.+.+.++|+|+.||+|.||.......||.|..  .|..+-||.+||.
T Consensus       401 ~~v~a~~d-y~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~--mg~ke~~~~~~~~  454 (460)
T KOG3771|consen  401 YKVKALHD-YAAQDTDELSFEAGDVILVIPSDNPEEQDEGWL--MGVKESDWNGLFP  454 (460)
T ss_pred             cceecccc-ccccccccccccCCCEEEEecCCCccchhhHHH--hhhccccccccee
Confidence            56889999 778888999999999999999666678999984  5666777766654

>KOG2222|consensus

Probab=96.82  E-value=0.00029  Score=64.88  Aligned_cols=66  Identities=21%  Similarity=0.336  Sum_probs=50.9

Q ss_pred             hhHHHhhhcCC--ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          15 TLKDCLYRLTP--AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        15 ~l~~~L~~~~P--~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ++..++..++.  ..++|+-| |.-.+.++|.|+++|+|+||....| .-|-|..  +|--||||+-+|+-+
T Consensus       536 d~~nfik~~r~~~krakal~d-f~r~dddelgfrkndiitiisekde-hcwvgel--nglrgwfpakfvell  603 (848)
T KOG2222|consen  536 DHANFIKGARTGAKRAKALHD-FAREDDDELGFRKNDIITIISEKDE-HCWVGEL--NGLRGWFPAKFVELL  603 (848)
T ss_pred             hHHHHhhhhhhhhHHHHHHhh-hhhccccccccccccEEEEeecCCc-ceeeecc--ccccccchHHHHHHH
Confidence            45667766654  45678888 5456778999999999999986654 5789985  567799999999853

>KOG1451|consensus

Probab=96.81  E-value=0.0012  Score=61.82  Aligned_cols=57  Identities=19%  Similarity=0.343  Sum_probs=48.7

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ++.++++|+ +.+.++.+|.|..|.+++-+-.+.+.+|-.|..  +|+.|++|.|||+|+
T Consensus       756 ~rk~k~lyA-c~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtL--nGktglip~nyve~l  812 (812)
T KOG1451|consen  756 SRRVKTLYA-CTADHHSELSFEPGTIFTNVYESNEDGWLVGTL--NGKTGLIPSNYVEPL  812 (812)
T ss_pred             cccccceec-cCCCCcccccccCcceeeeecccCCCCceeeec--CCCcccCcccccCcC
Confidence            477889998 447788899999999998777677788999995  689999999999974

>KOG3557|consensus

Probab=96.76  E-value=0.00068  Score=63.72  Aligned_cols=61  Identities=18%  Similarity=0.422  Sum_probs=51.6

Q ss_pred             cCCc-eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          23 LTPA-VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        23 ~~P~-~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      +++. +++.+|| |.+....+|+..+||+++|++..  -.||+.+|. .|+.|+.|.|.+++++..
T Consensus       497 a~~~k~~~~~Yd-f~arNs~ELsV~k~E~LEvl~d~--R~WW~~kn~-~G~~GyvP~nIL~~~~~~  558 (721)
T KOG3557|consen  497 AQGKKWVLVLYD-FQARNSSELSVKKGEVLEVLDDG--RKWWKVKNG-HGRAGYVPSNILAPLQPE  558 (721)
T ss_pred             cccceeeeeehh-hhcccchhhhhhhhhhhhhhhcc--ccceeccCc-cCCCCCcchhhhccCCCc
Confidence            4455 7889999 76777889999999999999965  469999995 799999999999988643

>KOG0609|consensus

Probab=96.65  E-value=0.0011  Score=61.18  Aligned_cols=55  Identities=20%  Similarity=0.473  Sum_probs=41.2

Q ss_pred             ceEEEecccCCCCCC-------CCccccCCCEEEEEecCCCCCceeeecCC---CCccceecCCCee
Q psy2788          26 AVMKATQNCHEIDEE-------GKLYIDAGDQIVIIEGDPECHWWKGQNLS---TFNIGMFPRNIMD   82 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~-------~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r---tg~~G~FP~n~V~   82 (161)
                      ..|||++| |+..++       ..|.|++|||+.|+.+. |.+||+++...   .+.-|++|++...
T Consensus       215 ~~vra~Fd-YdP~~D~~IPCkEagl~F~~GDILqIv~qd-D~nWWQA~~~~~~~~~~AGLiPS~~~q  279 (542)
T KOG0609|consen  215 VFVRALFD-YDPKEDDLIPCKEAGLPFQRGDILQIVSQD-DPNWWQARRVGDPFGGLAGLIPSKELQ  279 (542)
T ss_pred             eeehhhcC-cCcccCCcccchhcCCcccccceeeeccCC-CcchhhhhcccCccccccccccCHHHH
Confidence            35789999 545433       25999999999999965 57899998543   3567999987653

>KOG3632|consensus

Probab=96.56  E-value=0.0023  Score=62.79  Aligned_cols=56  Identities=16%  Similarity=0.236  Sum_probs=44.3

Q ss_pred             ceEEEecccCCCC--------CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEID--------EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~--------e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..+.|++|| +.-        ...+|.|++||||.|+-.....+++.|..  +++.|++|+|.|.++
T Consensus      1139 rifVAlfDY-Dpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~--ngr~GlIPcNmvae~ 1202 (1335)
T KOG3632|consen 1139 RIFVALFDY-DPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGEL--NGRRGLIPCNMVAEQ 1202 (1335)
T ss_pred             eeeEeeecc-CccccCCCCChhhhccccccCcEEEEeccccccceeeccc--ccccccccccccccc
Confidence            567899994 331        12479999999999996665568999984  689999999999864

>KOG4792|consensus

Probab=96.26  E-value=0.0051  Score=51.98  Aligned_cols=62  Identities=21%  Similarity=0.308  Sum_probs=46.8

Q ss_pred             hhhcCCceEEEeccc-CCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          20 LYRLTPAVMKATQNC-HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        20 L~~~~P~~vrAl~d~-~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      |....|.+++++++- -++=+.-.|.+++||+|-|..... +.-|+|..  +|++|.||-.+|.=.
T Consensus       222 l~~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ni-nGqwegEl--nGk~G~fPfThvrf~  284 (293)
T KOG4792|consen  222 LQQNLPAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNI-NGQWEGEL--NGKIGHFPFTHVRFT  284 (293)
T ss_pred             cccCCChheeeehhcCCCccChhhhhhhcCcEEEEEeecc-Cceeeeee--cCccccccceeEEee
Confidence            445568888888871 111134579999999999998655 46899984  799999999998754

>KOG4773|consensus

Probab=96.06  E-value=0.00061  Score=60.11  Aligned_cols=54  Identities=20%  Similarity=0.318  Sum_probs=42.5

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..+|+.| |......+|.|.+||+|.++... +.+||.|+.  -+..|+||.+||.++
T Consensus       177 ~~~a~~d-f~gns~~EL~l~agdV~~~~~r~-ek~W~~gk~--R~~~g~yp~sF~~~l  230 (386)
T KOG4773|consen  177 RAEASFD-FPGNSKLELNLVAGDVEFLLSRD-EKYWLLGKV--RGLTGYYPDSFVKQL  230 (386)
T ss_pred             HHHhhcc-CCCCccceeeeehhhHHHHHhhc-ccceeeeee--ccccccccHHhhhhh
Confidence            3456777 43445579999999999999855 579999985  367799999999865

>KOG3632|consensus

Probab=94.65  E-value=0.019  Score=56.71  Aligned_cols=58  Identities=22%  Similarity=0.362  Sum_probs=47.3

Q ss_pred             CCceEEEecccCCCCCC-------CCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          24 TPAVMKATQNCHEIDEE-------GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~-------~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .|..|.|.+| |...+.       .+|.|..||||+|..+..+..+..|..  +|+.|+.|+|+++-.
T Consensus      1243 ~p~~mvaa~d-ydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGel--ngqkglvpsnfle~p 1307 (1335)
T KOG3632|consen 1243 PPRQMVAASD-YDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGEL--NGQKGLVPSNFLEAP 1307 (1335)
T ss_pred             chhhhhhhhc-CCcccCCCCcccceeeccccCCeEEeeccccCCccccccc--CCccCccccccccCC
Confidence            3568889999 545432       379999999999999998889999984  688899999987643

>KOG3812|consensus

Probab=93.76  E-value=0.033  Score=49.61  Aligned_cols=52  Identities=21%  Similarity=0.404  Sum_probs=39.0

Q ss_pred             eEEEecccCCCCCC------CCccccCCCEEEEEecCCCCCceeeecCC-CCccceecCC
Q psy2788          27 VMKATQNCHEIDEE------GKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRN   79 (161)
Q Consensus        27 ~vrAl~d~~~~~e~------~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n   79 (161)
                      .|++..+|.+.-+.      ..++|+..|.|-|-++-+ ++||-|+..+ ..++|++|..
T Consensus        60 AV~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKyn-nDWWIGRlVkeg~e~gFiPsp  118 (475)
T KOG3812|consen   60 AVRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYN-NDWWIGRLVKEGCEIGFIPSP  118 (475)
T ss_pred             EEEeccccCCccCCCCCCCCceeeeccccceeehhhcc-cchhHHHHhhcCCccccccch
Confidence            45677775443222      259999999999999765 6899999765 4789999965

>KOG3565|consensus

Probab=93.34  E-value=0.03  Score=53.10  Aligned_cols=58  Identities=28%  Similarity=0.388  Sum_probs=48.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..+.|++. |....++.+++..|+++.||+.....+|-+|+..+.+..|.||.+|++-.
T Consensus       579 ~~~~a~~~-~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~  636 (640)
T KOG3565|consen  579 RTSKALYA-FEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVT  636 (640)
T ss_pred             cceecccC-cCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccc
Confidence            34556777 66677799999999999999998888899999556789999999998753

>KOG3705|consensus

Probab=93.08  E-value=0.1  Score=47.56  Aligned_cols=54  Identities=19%  Similarity=0.333  Sum_probs=38.4

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      .++++++ ..+...+++.+++||+|-|--.-=+ +.-+|.|.+|++.|+||+--|.
T Consensus       511 n~ivi~a-H~prt~~ei~l~vGD~vgvAGNHWd-GySKG~Nr~t~~~GlfPSyKvr  564 (580)
T KOG3705|consen  511 NVIVIEA-HIPRTNKEIDLKVGDKVGVAGNHWD-GYSKGTNRQTYKEGLFPSYKVR  564 (580)
T ss_pred             ceEEEEe-cCCCcccccCcccCCeeeecccccc-cccccccccccccCCCccceee
Confidence            4556666 4344457999999999977642211 2367889899999999976554

>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria

Probab=93.07  E-value=0.12  Score=36.44  Aligned_cols=28  Identities=25%  Similarity=0.650  Sum_probs=21.3

Q ss_pred             CCCccccCCCEEEEEecC-----CCCCceeeec
Q psy2788          40 EGKLYIDAGDQIVIIEGD-----PECHWWKGQN   67 (161)
Q Consensus        40 ~~~L~f~~GDiI~Vid~~-----~e~~WW~Gqn   67 (161)
                      |-+|.++.||.|.|-+..     .+.+||.|+.
T Consensus         1 P~FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V   33 (75)
T PF11302_consen    1 PVFLSVKPGDTVIVQDEQEVGQKQDKDWWMGQV   33 (75)
T ss_pred             CcccccCCCCEEEEecCccccccCCCCcEEEEE
Confidence            357999999999776532     2468999985

>KOG3725|consensus

Probab=92.65  E-value=0.059  Score=46.50  Aligned_cols=62  Identities=13%  Similarity=0.167  Sum_probs=48.7

Q ss_pred             HhhhcC-CceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeee
Q psy2788          19 CLYRLT-PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        19 ~L~~~~-P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      .|.|+. ..++|++|| |++..+.+|++-..|+|+|..-- -|.+|-.|.  +.++.|-.|..|++-
T Consensus       310 ~l~e~sgtrkArVlyD-YdAa~s~ElslladeiitVyslpGMD~dwlmgE--rGnkkGKvPvtYlEL  373 (375)
T KOG3725|consen  310 DLKECSGTRKARVLYD-YDAALSQELSLLADEIITVYSLPGMDADWLMGE--RGNKKGKVPVTYLEL  373 (375)
T ss_pred             hHHhhccccceeeeec-ccccchhhhhhhhcceEEEEecCCCChHHhhhh--hcCCCCCcchhHHHh
Confidence            444543 578999999 77778889999999999999732 246799997  567889999988753

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=91.47  E-value=0.16  Score=36.80  Aligned_cols=43  Identities=19%  Similarity=0.146  Sum_probs=28.9

Q ss_pred             CCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          41 GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        41 ~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+|.+++|.++.||+.+. ..-|-++|. .|+-|+.+++++-+..
T Consensus        31 kDLpi~~GE~LeVI~~t~-~~kvlCRN~-~GKYGYV~~~~L~~~d   73 (89)
T PF14603_consen   31 KDLPIKPGEILEVIQFTD-DNKVLCRNS-EGKYGYVLRSHLLPLD   73 (89)
T ss_dssp             TB----TT-B-EEEEESS-SSEEEEEET-TTEEEEEEGGGS----
T ss_pred             ccCCcCCCCEEEEEEeCC-CCeEEEeCC-CCceeEEEHHHccCCC
Confidence            589999999999999776 468999996 7999999998876643

>KOG3601|consensus

Probab=91.31  E-value=0.045  Score=45.55  Aligned_cols=49  Identities=20%  Similarity=0.399  Sum_probs=37.6

Q ss_pred             EecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCe
Q psy2788          30 ATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM   81 (161)
Q Consensus        30 Al~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V   81 (161)
                      |+.+ |.....+||+|.+||.+.|++...+.+|.+...  .|.-|+.|.||.
T Consensus         5 a~n~-f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ael--~g~~g~~P~Nai   53 (222)
T KOG3601|consen    5 AKND-FLAGIRDELSFLKGDNLKILNMEDDINWYKAEL--DGPEGFIPKNAI   53 (222)
T ss_pred             hhhh-hhhcCcccceeecCCceEecchHHhhhhhhHhh--cCccccCccccc
Confidence            5555 445567999999999999998665556766653  577899999997

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=87.13  E-value=0.57  Score=29.40  Aligned_cols=39  Identities=10%  Similarity=0.320  Sum_probs=29.1

Q ss_pred             ccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          43 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        43 L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      -.+..|+.|+|++...+.+|.+=+. ..++.|+..++||+
T Consensus        17 ~~l~~g~~v~v~~~~~~~~W~~V~~-~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   17 GQLPKGEKVTVLGESGDGNWYKVRT-YDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEEETTSEEEEEEEETT--EEEEEE-ETTEEEEEEGGCEE
T ss_pred             EEEeCCCEEEEEEEcCCcEEEEEEC-cCCcEEEEEccccC
Confidence            4578999999999776544777644 36778999998874

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	161
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-12
1cf4_B	44	Cdc42ACK GTPASE-Binding Domain Complex Length = 44		4e-05

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 7   PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 66
           P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQ
Sbjct: 260 PEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQ 316
Query: 67  NLSTFNIGMFPRNIM 81
           N  T  +G FPRN++
Sbjct: 317 NTRTLCVGPFPRNVV 331

>pdb|1CF4|B Chain B, Cdc42ACK GTPASE-Binding Domain Complex Length = 44

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 91  DISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYLNN 126
           DIS+PL+NS IHTGHGD   +  WG P  ID +YL N
Sbjct: 8   DISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLGN 44

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
1cf4_B	44	Protein (activated P21CDC42HS kinase); CDC42/ACK G	9e-14
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	2e-10
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	3e-10
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	7e-09
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	1e-07
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	1e-07
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	2e-07
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	2e-07
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	3e-07
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	3e-07
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	3e-07
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	4e-07
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	4e-07
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	5e-07
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	8e-07
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	8e-07
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	9e-07
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	9e-07
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	1e-06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-06
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	2e-06
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	2e-06
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	2e-06
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	4e-06
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	4e-06
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	4e-06
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	6e-06
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	7e-06
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	8e-06
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	8e-06
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	2e-05
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	2e-05
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	2e-05
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	2e-05
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	2e-05
1awj_A	77	ITK; transferase, regulatory intramolecular comple	2e-05
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	2e-05
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	3e-05
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	4e-05
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	4e-05
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	4e-05
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	4e-05
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	4e-05
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	4e-05
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	5e-05
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	6e-05
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	6e-05
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	7e-05
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	1e-04
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	1e-04
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	1e-04
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	1e-04
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	1e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	1e-04
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	1e-04
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	2e-04
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	2e-04
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	2e-04
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	2e-04
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	2e-04
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	2e-04
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	2e-04
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	2e-04
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	3e-04
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	3e-04
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	3e-04
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	3e-04
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	3e-04
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	4e-04
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	4e-04
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	4e-04
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	4e-04
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	5e-04
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	5e-04
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	5e-04
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	5e-04
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	5e-04
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	6e-04
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	7e-04
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	7e-04
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	7e-04
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	8e-04
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	8e-04
3u23_A	65	CD2-associated protein; structural genomics, struc	8e-04
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	9e-04
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	9e-04

>1cf4_B Protein (activated P21CDC42HS kinase); CDC42/ACK GTPase complex, G protein, transferase; HET: GNP; NMR {Homo sapiens} Length = 44

 Score = 61.2 bits (148), Expect = 9e-14
 Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)

Query: 87  KQPDDISRPLRNSVIHTGHGDPWGK-SWGSPSHIDPMYLNN 126
               DIS+PL+NS IHTGHGD   +  WG P  ID +YL N
Sbjct: 4   LSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLGN 44

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1 Length = 78

 Score = 53.5 bits (128), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 27/45 (60%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
            G L ++ GD + + + + E +WW+G+N +T  +G FP N + P
Sbjct: 31 FGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHP 75

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A Length = 70

 Score = 52.7 bits (126), Expect = 3e-10
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 28 MKATQNCH-----EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD 82
          M+  Q  +            L ++ GD + + + + E +WW+G+N +T  +G FP N + 
Sbjct: 7  MEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH 66

Query: 83 P 83
          P
Sbjct: 67 P 67

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 48.8 bits (117), Expect = 7e-09
 Identities = 13/53 (24%), Positives = 28/53 (52%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 91
           + +L I +GD++ I++      WW  Q + +   G+ P   ++P+R K+  +
Sbjct: 19 SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDKKHTE 71

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +G L  + G+Q+ I+E   E  WWK Q+L+T   G  P N
Sbjct: 19 HDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFN 57

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 45.8 bits (109), Expect = 1e-07
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              L    G++  I+E      WW+ ++L+T   G  P N
Sbjct: 19 RWTDLSFHKGEKFQILE-FGPGDWWEARSLTTGETGYIPSN 58

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 44.6 bits (106), Expect = 2e-07
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 28 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +KA  +    D    L    GD I ++  +    W  G++  T   G FP +
Sbjct: 10 VKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFS 61

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 44.5 bits (106), Expect = 3e-07
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
           + +L I +GD++ I++      WW  Q + +   G+ P   ++P+
Sbjct: 15 SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 60

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 44.6 bits (106), Expect = 3e-07
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 91
           E  L    G++  I+    E  WW+ ++L+T   G  P   + P+ R    D
Sbjct: 18 TEDDLSFHKGEKFQILN-SSEGDWWEARSLTTGETGYIPSIYLAPVDRLDYKD 69

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 44.7 bits (106), Expect = 3e-07
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           + G+L    GD + I+E      W++ ++ ++   G+    
Sbjct: 29 PKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAG 70

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 38 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 89
            E +L  + G+ + +IE  + +  WWK +N     +G+ P+N +  +     
Sbjct: 18 VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVLSDGPA 69

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 91
          E   L ++ G + +I+E   + HWW+ ++    + G  P N +   +    D 
Sbjct: 15 EAHDLRLERGQEYIILE-KNDLHWWRARDKYG-SEGYIPSNYVTGKKSNNLDQ 65

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 44.2 bits (105), Expect = 5e-07
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E  L    G++  I+    E  WW+ ++L+T   G  P N
Sbjct: 28 TEDDLSFHKGEKFQILN-SSEGDWWEARSLTTGETGYIPSN 67

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 43.5 bits (103), Expect = 8e-07
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 28 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +K        + +  L    GD + ++  + +  W  G++ +T   G FP +
Sbjct: 10 VKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSS 61

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 42.9 bits (102), Expect = 8e-07
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          ++E  L    GD + I +  PE  WW  ++      GM P  
Sbjct: 13 NDEEDLPFKKGDILRIRD-KPEEQWWNAEDSEG-KRGMIPVP 52

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 43.6 bits (103), Expect = 9e-07
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 38 HHEDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 76

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 43.4 bits (103), Expect = 9e-07
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 35 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
               E  L    GD + I+    + +W+K +N      G+ P N
Sbjct: 20 FHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPAN 63

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 43.1 bits (102), Expect = 1e-06
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 22 RLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +    +K          +  L    GD I ++  + +  W  G++  +   G FP +
Sbjct: 3  HMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSS 60

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 43.5 bits (103), Expect = 1e-06
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 16 SPDDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 54

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           ++ ++ I  GD+I ++  D    W K  N +T   G+ P  
Sbjct: 13 KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTT 54

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E+ +L     D+I+ IE   +  WW G+     + G+FP N
Sbjct: 12 AEDNELTFVENDKIINIEFVDD-DWWLGELEKDGSKGLFPSN 52

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          ++E  L    GD + I +   E  WW  ++      GM P  
Sbjct: 15 NDEEDLPFKKGDILRIRDKPEE-QWWNAEDSEG-KRGMIPVP 54

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              L +  GD+  I+E +    WW+ ++      G  P N
Sbjct: 21 NANDLQLRKGDEYFILE-ESNLPWWRARD-KNGQEGYIPSN 59

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 41.5 bits (98), Expect = 4e-06
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          + G L    G+ +++IE  P+  WW  ++    N G+ PR 
Sbjct: 23 QVGDLTFKKGEILLVIEKKPD-GWWIAKDAKG-NEGLVPRT 61

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 42.1 bits (99), Expect = 4e-06
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 38 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 89
            E +L  + G+ + +IE  + +  WWK +N     +G+ P+N +  +     
Sbjct: 29 VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVLSDGPA 80

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 41.3 bits (97), Expect = 6e-06
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 88
          +        G+++ +I  +    WWK  +LST      P   +  +    
Sbjct: 30 DISPPIFRRGEKLRVISDEGG--WWKAISLSTGRESYIPGICVARVSGPS 77

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 41.2 bits (97), Expect = 7e-06
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 38 DEEGKLYIDAGDQIVIIE----GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 88
          + E ++ +  GD + I+        +  WWK +  +  NIG  P N ++ ++R++
Sbjct: 27 NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG-NIGYIPYNYIEIIKRRK 80

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIMDPMRR 86
           EE +L   +G+ + +++      WW G      +  +G+FP N + PM R
Sbjct: 13 LEEDELGFRSGEVVEVLDSSNP-SWWTG----RLHNKLGLFPANYVAPMMR 58

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 40.7 bits (96), Expect = 8e-06
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDIS 93
          DE   L ++  D +++     + +W++  N+ T   G+FP      + + +P+ ++
Sbjct: 21 DE---LELEVDDPLLVELQAED-YWYEAYNMRTGARGVFPAYYAIEVTK-EPEHMA 71

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +E ++    GD IV ++   +  W  G    T   GM P N
Sbjct: 18 QDEDEVSFRDGDYIVNVQPIDDG-WMYGTVQRTGRTGMLPAN 58

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 89
          +  +L I+  + + +IE      W K +N     +G  P   +       P
Sbjct: 26 QPDELTIEEHEVLEVIEDGDMEDWVKARNKVG-QVGYVPEKYLQFPTSSGP 75

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 40.1 bits (94), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          D E +L    G+ I +I    E +W++G+   T   G+FP +
Sbjct: 29 DLEVELSFRKGEHICLIRKVNE-NWYEGRITGTGRQGIFPAS 69

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 39.6 bits (93), Expect = 2e-05
 Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           EG + +  G+ + ++E D    W + +       G  P +
Sbjct: 20 SEGTISMAEGEDLSLMEEDKGDGWTRVRR-KEGGEGYVPTS 59

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          D + ++    G++I ++    E +W++G+   T   G+FP  
Sbjct: 19 DTQVEMSFRKGERITLLRQVDE-NWYEGRIPGTSRQGIFPIT 59

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 8/41 (19%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +  +L +   ++  +++   E HWW+ Q+    + G  P +
Sbjct: 33 DPQELALRCDEEYYLLD-SSEIHWWRVQD-KNGHEGYAPSS 71

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD-----IS 93
              L    G++  II  + E  WW+ ++++T   G  P N + P    Q ++     + 
Sbjct: 40 TTEDLSFKKGERFQIIN-NTEGDWWEARSIATGKSGYIPSNYVVPADSIQAEEWYFGKMG 98

Query: 94 R 94
          R
Sbjct: 99 R 99

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          DE   L ++  D +++     + +W++  N+ T   G+FP  
Sbjct: 18 DE---LELEVDDPLLVELQAED-YWYEAYNMRTGARGVFPAY 55

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              +L +  GD I I   +P   W  G+ L     G  P  
Sbjct: 13 GSPSELPLKKGDVIYITREEPS-GWSLGKLLDGSKEGWVPTA 53

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 39.2 bits (92), Expect = 4e-05
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              +L +  G+ I +   +    W +G+N +    G+ P +
Sbjct: 22 PGNNELTVTEGEIITVTNPNVGGGWLEGKN-NKGEQGLVPTD 62

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 39.3 bits (92), Expect = 4e-05
 Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +  +L +   ++  +++   E HWW+ Q+ +  + G  P +
Sbjct: 32 DPQELALRRNEEYCLLD-SSEIHWWRVQDRNG-HEGYVPSS 70

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          + + +L +  GD + I     +  W   +N S    G+ P  
Sbjct: 13 ENDNELRLAEGDIVFISYKHGQ-GWLVAENESGSKTGLVPEE 53

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 38.8 bits (91), Expect = 4e-05
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          D + ++    G++I ++    E +W++G+   T   G+FP  
Sbjct: 18 DTQVEMSFRKGERITLLRQVDE-NWYEGRIPGTSRQGIFPIT 58

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E+ +L   AGD++  +  + E  W +G+ L +  +G++P N
Sbjct: 15 QEQDELSFKAGDELTKLGEEDEQGWCRGR-LDSGQLGLYPAN 55

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 4/94 (4%)

Query: 38  DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLR 97
           + E  L  + G+++ I+       WW+ +N      G+ P N +        D  S+   
Sbjct: 159 ERETDLPFEQGERLEILS-KTNQDWWEARNALG-TTGLVPANYVQIQMEFHNDRTSKGAS 216

Query: 98  NSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPP 131
            S    G      + + S S         P  P 
Sbjct: 217 QS--SIGSSGGGAERFSSASTSSDNIELQPRLPA 248

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.6 bits (90), Expect = 6e-05
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 8/48 (16%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNI-------GMFPRN 79
              L   AGD++ +++      WW  ++L            G  P N
Sbjct: 20 TAEDLSFRAGDKLQVLD-TSHEGWWLARHLEKKGTGLGQQLQGYIPSN 66

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 38.4 bits (90), Expect = 6e-05
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          + + +L +  GD + I     +  W   +N S    G+ P  
Sbjct: 17 ENDNELRLAEGDIVFISYKHGQ-GWLVAENESGSKTGLVPEE 57

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
            + ++ ID GD I +I GD    W  G      +   G+FP +
Sbjct: 12 QGDDEISIDPGDIITVIRGDDGSGWTYG----ECDGLKGLFPTS 51

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 38.3 bits (89), Expect = 1e-04
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 38 DEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 89
          + E ++ +  GD + I+        +  WWK +  +  NIG  P N ++ ++R++ 
Sbjct: 27 NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG-NIGYIPYNYIEIIKRRKK 81

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E G L    G++I++ + D E  WW G        G+FP N
Sbjct: 20 VEPGDLTFTEGEEILVTQKDGE--WWTGS--IGDRSGIFPSN 57

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E+ +L    G+ I +++ D + +WW+G+N      G+FP N
Sbjct: 17 VEDNELTFKHGELITVLD-DSDANWWQGENHR--GTGLFPSN 55

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 37.7 bits (88), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              +L +  GD + I   +P   W   + L     G  P  
Sbjct: 15 GSSSELPLKKGDIVFISRDEPS-GWSLAKLLDGSKEGWVPTA 55

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 88
              +L +  G+ I ++    +  W KG +L T   G+FP + + P+    
Sbjct: 19 HRPEELDLQKGEGIRVLGKYQD-GWLKGLSLLTGRTGIFPSDYVIPVSGPS 68

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 36 EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR 86
          + DE   +    GD  ++   + E  W    NL T   G+   ++++ + R
Sbjct: 19 DTDE---ISFLKGDMFIVHN-ELEDGWMWVTNLRTDEQGLIVEDLVEEVGR 65

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 37.3 bits (87), Expect = 1e-04
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR 86
             +L +   D + +++   +  WWK ++ +    G  P NI+ P   
Sbjct: 21 NSSELSVKQRDVLEVLDDSRK--WWKVRDPAG-QEGYVPYNILTPYPA 65

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +  L I  G+++ ++  +    W + Q  +    G  P  
Sbjct: 18 GDNTLSITKGEKLRVLGYNHNGEWCEAQTKN--GQGWVPSA 56

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           ++G L +  GD++ ++E      W+KG    + N   G+FP N
Sbjct: 14 QQDGDLGLKPGDKVQLLEKLSP-EWYKG----SCNGRTGIFPAN 52

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           E+G+L    GD I +++     +WWKG      +   GMFPRN
Sbjct: 14 QEDGELGFRRGDFIHVMDNSDP-NWWKG----ACHGQTGMFPRN 52

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 37.2 bits (87), Expect = 2e-04
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            E +L +  GD++ +++   +  W+ G +  T   G FP N
Sbjct: 19 QNEDELELREGDRVDVMQQCDD-GWFVGVSRRTQKFGTFPGN 59

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 37.3 bits (87), Expect = 2e-04
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQ-NLSTFNIGMFPRN 79
          D + +L    G+ I++   + +  WW G         G+FP +
Sbjct: 22 DNDDELTFIEGEVIIVTGEEDQ-EWWIGHIEGQPERKGVFPVS 63

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 36.9 bits (86), Expect = 2e-04
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           E+ +L   AG+ I +++     +WWKG      +  IG+FP N
Sbjct: 29 AEDNELTFKAGEIITVLDDSDP-NWWKG----ETHQGIGLFPSN 67

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 7/47 (14%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN------IGMFPRN 79
             ++ +  GD + ++       WWK +   T N       G  P  
Sbjct: 14 SPREVTMKKGDILTLLN-STNKDWWKVEVKITVNGKTYERQGFVPAA 59

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 25 PAVMKATQN-CHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIM 81
          P   KA Q       ++  L ++ GD + +   +     W+G+     N   G+FP   +
Sbjct: 1  PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNIN-GQWEGE----VNGRKGLFPFTHV 55

Query: 82 DPMRRKQPDD 91
               + PD+
Sbjct: 56 KIFDPQNPDE 65

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 37.1 bits (86), Expect = 3e-04
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKG----QNLSTFNIGMFPRNIMDPMRRK 87
           +   L + AGD I ++E  P+   WKG        T  IG FP  I++ + ++
Sbjct: 31 HDPTALNVRAGDVITVLEQHPD-GRWKGHIHESQRGTDRIGYFPPGIVEVVSKR 83

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%)

Query: 38 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFN--IGMFPRN 79
          +E G L    GD I I++  D +  WW G      N   G+FP N
Sbjct: 15 EESGDLPFRKGDVITILKKSDSQNDWWTG----RVNGREGIFPAN 55

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
            + +L I  G+ I  ++   E  W +G      N   GMFP N
Sbjct: 13 VHDDELTIRVGEIIRNVKKLQEEGWLEG----ELNGRRGMFPDN 52

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           E G+L    GD I +I  D   +WW+G      N   G+FP N
Sbjct: 14 QESGELAFKRGDVITLINKDDP-NWWEG----QLNNRRGIFPSN 52

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 36.6 bits (85), Expect = 3e-04
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          DE   + +   D +++++ +    W  G+ L     G FP +
Sbjct: 32 DE---VTLQQADVVLVLQQED--GWLYGERLRDGETGWFPED 68

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 36.7 bits (85), Expect = 4e-04
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 6/45 (13%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECH---WWKGQNLSTFNIGMFPRN 79
          DE   L +  GD I +   +       W  G +L+T   G+ P N
Sbjct: 31 DE---LELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPEN 72

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           E   L +  GD I ++E   E  WWKG         IG FP N
Sbjct: 19 QENEDLEMRPGDIITLLEDSNE-DWWKG----KIQDRIGFFPAN 57

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 36.1 bits (84), Expect = 4e-04
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 35 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
           + DE   +    GD  ++   + E  W    NL T   G+   ++++ +
Sbjct: 20 PDTDE---ISFLKGDMFIVHN-ELEDGWMWVTNLRTDEQGLIVEDLVEEV 65

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 36.2 bits (84), Expect = 4e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          +   +L I  GD I +   D E  WW G  +     G FP N
Sbjct: 18 NRSDELTIHRGDIIRVFFKDNE-DWWYGS-IGKGQEGYFPAN 57

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} Length = 68

 Score = 36.1 bits (84), Expect = 5e-04
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
            + +L +  GD I ++    E  WW+G      N   GMFP N
Sbjct: 19 QNDDELELKVGDIIEVVGEVEE-GWWEG----VLNGKTGMFPSN 57

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 36.2 bits (84), Expect = 5e-04
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 7/45 (15%)

Query: 38 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFN--IGMFPRN 79
           + G L   AGD+I +I   D    WW+G          G+FP N
Sbjct: 29 QQPGDLNFQAGDRITVISKTDSHFDWWEG----KLRGQTGIFPAN 69

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens} Length = 58

 Score = 35.6 bits (83), Expect = 5e-04
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 7/43 (16%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           + +L I  G+ I  I  +    WW+G      N   G+FP N
Sbjct: 14 HDDELTISVGEIITNIRKEDG-GWWEG----QINGRRGLFPDN 51

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens} Length = 486

 Score = 38.6 bits (88), Expect = 5e-04
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 38  DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            E  +L   AGD++  +E + E  W KG+ L    +G++P N
Sbjct: 440 QEHDELSFKAGDELTKMEDEDEQGWCKGR-LDNGQVGLYPAN 480

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 37.8 bits (87), Expect = 5e-04
 Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 39  EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            E  L  + G+++ I+       WW+ +N      G+ P N
Sbjct: 131 RETDLPFEQGERLEILS-KTNQDWWEARNALG-TTGLVPAN 169

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 72

 Score = 35.7 bits (83), Expect = 6e-04
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 6/44 (13%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
          + + +L   AG     +    E  W +G    T N   G+ P N
Sbjct: 22 EHDSELSFTAGTVFDNVHPSQEPGWLEG----TLNGKTGLIPEN 61

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 37.0 bits (85), Expect = 7e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIMDPMR 85
          +  +L +  GD I I+    +  WW+G         IG FP N ++   
Sbjct: 18 DRSELSLKEGDIIKILNKKGQQGWWRG----EIYGRIGWFPSNYVEEDY 62

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
           ++  L ++ G+ + + + +     W+G      N   G FP  
Sbjct: 20 YDKTALALEVGELVKVTKINVS-GQWEG----ECNGKRGHFPFT 58

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 35.4 bits (82), Expect = 7e-04
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 5/46 (10%)

Query: 38 DEEGKLYIDAGDQIVIIE----GDPECHWWKGQNLSTFNIGMFPRN 79
          + E ++ +  GD + I+        +  WWK +  +  NIG  P N
Sbjct: 20 NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG-NIGYIPYN 64

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              +L    G  I  +  +P   WWKG    T     FP N
Sbjct: 19 KRSDELTFCRGALIHNVSKEPG-GWWKGD-YGTRIQQYFPSN 58

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens} Length = 58

 Score = 35.2 bits (82), Expect = 8e-04
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
              +LY + GD I I +     +WWKG    T     G+ P N
Sbjct: 15 RTPDELYFEEGDIIYITDMSDT-NWWKG----TSKGRTGLIPSN 53

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A Length = 65

 Score = 35.3 bits (82), Expect = 8e-04
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
            E +L +  GD I I E   E  WW G    T N  +G+FP N
Sbjct: 19 QNEDELELKVGDIIDINEEVEE-GWWSG----TLNNKLGLFPSN 57

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens} Length = 65

 Score = 35.3 bits (82), Expect = 9e-04
 Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 79
            E +L +  GD I I E   E  WW G    T N  +G+FP N
Sbjct: 13 QNEDELELKVGDIIDINEEVEE-GWWSG----TLNNKLGLFPSN 51

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 35.6 bits (82), Expect = 9e-04
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 39 EEGKLYIDAGDQIVIIEGDPECH----WWKGQNLSTFNIGMFPRN 79
           + +L +  GD++ ++  D        WW GQ L +  +G+FP N
Sbjct: 42 GDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQ-LPSGRVGVFPSN 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
1cf4_B	44	Protein (activated P21CDC42HS kinase); CDC42/ACK G	99.73
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.7
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.64
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.64
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.64
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.64
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.64
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.61
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.61
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.61
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.61
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.6
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.6
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.6
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.59
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.59
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.59
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.58
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.58
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.58
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.57
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.57
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.57
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.57
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.57
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.57
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.57
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.57
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.57
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.57
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.57
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.56
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.56
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.56
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.56
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.56
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.56
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.56
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.56
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.56
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.56
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.56
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.55
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.55
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.55
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.55
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.55
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.55
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.55
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.55
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.55
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.55
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.55
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.55
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.55
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.55
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.55
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.54
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.54
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.54
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.54
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.54
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.54
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.54
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.54
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.54
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.54
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.54
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.53
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.53
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.53
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.53
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.53
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.53
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.53
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.53
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.53
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.53
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.53
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.52
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.52
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.52
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.52
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.52
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.52
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.52
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.52
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.52
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.52
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.52
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.52
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.52
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.51
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.51
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.51
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.51
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.51
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.51
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.51
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.51
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.51
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.51
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.5
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.5
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.5
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.5
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.5
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.5
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.5
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.5
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.49
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.49
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.49
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.49
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.49
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.49
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.49
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.49
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.49
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.49
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.49
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.48
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.48
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.48
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.48
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.48
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.48
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.48
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.48
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.48
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.48
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.48
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.48
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.48
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.48
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.47
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.47
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.47
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.47
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.47
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.46
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.46
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.46
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.46
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.46
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.46
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.46
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.46
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.46
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.46
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.46
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.46
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.45
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.45
3u23_A	65	CD2-associated protein; structural genomics, struc	99.45
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.45
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.45
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.45
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.45
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.44
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.43
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.42
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.42
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.42
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.42
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.41
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.41
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.4
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.4
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.39
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.39
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.39
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.39
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.38
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.36
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.36
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.34
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.34
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	99.3
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.24
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.2
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	99.19
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.16
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.16
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.16
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.15
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.15
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.14
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.14
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.1
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.1
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.09
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	99.08
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.07
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.58
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	99.0
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	98.51
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	98.9
1u3o_A	82	Huntingtin-associated protein-interacting protein;	98.89
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	98.85
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	98.8
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	98.61
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	98.58
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.49
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.42
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	98.38
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	98.3
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	98.25
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	98.21
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	98.17
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	97.91
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	97.9
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.71
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	97.43
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	96.74
2y3a_B	302	Phosphatidylinositol 3-kinase regulatory subunit;	96.65
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	96.17
2eo3_A	111	CRK-like protein; phosphorylation, repeat, SH2 dom	95.57
2crh_A	138	VAV proto-oncogene; oncoprotein, structural genomi	90.68
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	88.61
2dly_A	121	FYN-related kinase; BRK family kinase, structural	86.61
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	84.87
2io0_B	91	Small ubiquitin-related modifier 2 precursor; SUMO	84.21
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	82.41
2ecd_A	119	Tyrosine-protein kinase ABL2; SH2 domain, phosphot	80.56

>1cf4_B Protein (activated P21CDC42HS kinase); CDC42/ACK GTPase complex, G protein, transferase; HET: GNP; NMR {Homo sapiens}

Probab=99.73  E-value=1.7e-18  Score=108.02  Aligned_cols=40  Identities=55%  Similarity=0.965  Sum_probs=37.3

Q ss_pred             CCCCCccccccccccccCCCCCC-CCCCCCCCCCCccccCC
Q psy2788          87 KQPDDISRPLRNSVIHTGHGDPW-GKSWGSPSHIDPMYLNN  126 (161)
Q Consensus        87 ~~~~~IS~P~~~S~ihtghg~~~-g~~wG~p~~idd~y~~~  126 (161)
                      +++++||+|+++||||||||+++ ++|||.|++|||+||.|
T Consensus         4 ~~~~dIS~pl~~SFiHtgHGd~~~~~sWG~P~~idd~yl~n   44 (44)
T 1cf4_B            4 LSAQDISQPLQNSFIHTGHGDSDPRHCWGFPDRIDELYLGN   44 (44)
T ss_dssp             SSSTTCCCSCSSCCCCCCCCCCCCSSCCCSSCCCCTTTCCC
T ss_pred             cCHHHccccccccceecCCCCCCcccccCChhHHhHHhhcC
Confidence            45779999999999999999996 89999999999999987

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.70  E-value=3e-17  Score=110.41  Aligned_cols=57  Identities=23%  Similarity=0.391  Sum_probs=51.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|| |.+.++++|+|++||+|+|++... .+||.|++.++++.|+||+|||+++
T Consensus         7 ~~~~Alyd-y~a~~~~ELs~~~Gd~i~v~~~~~-~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A            7 FSYQALYS-YIPQNDDELELRDGDIVDVMEKCD-DGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             EEEEEcee-ECCCCcCCcCCCCCCEEEEeEeCC-CCEEEEEECCCCCEEEEehhHeEEE
Confidence            57899999 678888999999999999999765 5799999988999999999999986

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.64  E-value=4.5e-16  Score=106.50  Aligned_cols=60  Identities=30%  Similarity=0.597  Sum_probs=51.1

Q ss_pred             ceEEEecccCCCCC-----CCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDE-----EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e-----~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +.++++++||.+..     +++|+|++||+|+|++...+.+||+|++.+++++|+||+|||++++
T Consensus        13 p~~~~~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           13 PKMEVFQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             CCEEECSCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             ccEEEEEECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            46778888776654     4899999999999999754568999998779999999999999875

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.64  E-value=2.9e-16  Score=101.69  Aligned_cols=57  Identities=25%  Similarity=0.352  Sum_probs=50.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +.++|+|+ |.+.++++|+|++||+|.|++... ..||.|++.++++.|+||+|||+++
T Consensus         1 p~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            1 PWATAEYD-YDAAEDNELTFVENDKIINIEFVD-DDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CCEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEECce-ECCCCCCCcccCCCCEEEEEEecC-CCcEEEEECCCCCEEEechHHeEEC
Confidence            36899999 667788999999999999999654 5799999988899999999999875

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.64  E-value=3e-16  Score=102.86  Aligned_cols=58  Identities=17%  Similarity=0.251  Sum_probs=51.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +.++|+|+ |.+.++++|+|++||+|.|++... ..||.|+|..+++.|+||+|||+++.
T Consensus         4 ~~~~al~~-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A            4 QTHRAIFR-FVPRHEDELELEVDDPLLVELQAE-DYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CCEEECSC-BCCSSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECcc-CCccCcCcCcCCCCCEEEEEEecC-CCEEEEEECCCCCEEEechHHEEECc
Confidence            56899999 667888999999999999998654 57999998789999999999999874

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.64  E-value=2.5e-16  Score=104.73  Aligned_cols=59  Identities=22%  Similarity=0.333  Sum_probs=50.1

Q ss_pred             CceEEEecccCCCCCCCC-ccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGK-LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~-L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+|+ |.+.++++ |+|++||+|+|++...+..||+|++.++++.|+||+|||+++
T Consensus         7 ~~~~~al~d-y~~~~~~e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            7 RMRVKAIFS-HAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CCEEEESSC-BCCCSCTTBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CeEEEEccc-cCCCCCCCCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            468999999 55555555 999999999999755556899999988999999999999975

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.64  E-value=2.1e-16  Score=104.94  Aligned_cols=55  Identities=22%  Similarity=0.429  Sum_probs=47.4

Q ss_pred             ceEEEecccCCCCCCCC-ccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGK-LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~-L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..+||+|| |.++.+++ |+|++||+|+|++... .+||+|++ .+|+.|+||+|||+.
T Consensus         4 ~~~rAlyd-y~~~~~~e~Ls~~~Gd~i~v~~~~~-~~Ww~g~~-~~G~~G~fP~nyVe~   59 (60)
T 2lx7_A            4 ARCRTLYP-FSGERHGQGLRFAAGELITLLQVPD-GGWWEGEK-EDGLRGWFPASYVQL   59 (60)
T ss_dssp             CEEEESCC-CCSCCCSSCCCCCTTCEEEBSCCCT-TSCEEEEC-TTSCEEEECGGGEEE
T ss_pred             CEEEECcc-cCCCCCCCCccCCCCCEEEEeEecC-CCeEEEEe-CCCCEEEEcHHHEEE
Confidence            57899999 66666776 9999999999999654 57999997 478999999999985

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.61  E-value=9.5e-16  Score=101.48  Aligned_cols=59  Identities=14%  Similarity=0.183  Sum_probs=52.2

Q ss_pred             CceEEEecccCCC-CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEI-DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~-~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|+ |.+ .++++|+|++||+|.|++... ..||.|++.++++.|+||+|||+++.
T Consensus         5 ~~~~~alyd-y~~~~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            5 RRRVRAILP-YTKVPDTDEISFLKGDMFIVHNELE-DGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             TCEEEESSC-BCCCTTSSBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CcEEEEccc-cCCCCCCCcCcCCCCCEEEEeEecC-CCEEEEEECCCCCEEEEEhHHeEECc
Confidence            567999999 667 788999999999999999754 57999998889999999999999863

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.61  E-value=5.4e-16  Score=103.09  Aligned_cols=60  Identities=18%  Similarity=0.292  Sum_probs=52.0

Q ss_pred             CceEEEecccCCC-CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEI-DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~-~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |.+ .++++|+|++||+|.|++...+..||+|++.++++.|+||+|||+++.
T Consensus         6 ~~~~~al~d-y~a~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            6 KQKVKTIFP-HTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCEEEESSC-BCCSSCSSBCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CEEEEEeec-CCCCCCCCCCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            578999999 664 678899999999999998634568999999878999999999999863

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.61  E-value=5.5e-16  Score=104.40  Aligned_cols=61  Identities=18%  Similarity=0.308  Sum_probs=52.8

Q ss_pred             CCceEEEecccCCC-CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEI-DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~-~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ....++|+|+ |.+ .++++|+|++||+|+|++...+..||+|++.++++.|+||+|||+++.
T Consensus         6 ~~~~~~al~d-y~a~~~~~eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   67 (72)
T 1spk_A            6 SGQKVKTIFP-HTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             CSCEEECSSC-BCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             CceEEEEeee-eCCCCCCCCCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            3578999999 654 678899999999999998634568999999878999999999999875

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.61  E-value=1e-15  Score=99.26  Aligned_cols=58  Identities=19%  Similarity=0.465  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++...+..||+|++.++++.|+||++||+++
T Consensus         3 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A            3 ERGIVQYD-FMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CEEEECSC-BCCCSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             cEEEEeee-ECCCCCCCccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEEC
Confidence            46899999 66788899999999999999974456899999877899999999999864

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.60  E-value=9.8e-16  Score=98.73  Aligned_cols=57  Identities=25%  Similarity=0.417  Sum_probs=49.9

Q ss_pred             ceEEEecccC-CCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCH-EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~-~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +.++|+++ | ....+++|+|++||+|.|++... .+||+|++.++++.|+||+|||++.
T Consensus         1 p~~~al~d-~~~~~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~   58 (58)
T 1zuy_A            1 PMFEAAYD-FPGSGSPSELPLKKGDVIYITREEP-SGWSLGKLLDGSKEGWVPTAYMKPH   58 (58)
T ss_dssp             CEEEESSC-BCCCSCTTBCCBCTTCEEEEEEECT-TSEEEEEESSCSCEEEEEGGGEECC
T ss_pred             CEEEEecc-cCCCCCCCcCCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEecHHHEEEC
Confidence            36899999 5 57788999999999999999764 5799999988899999999999863

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.60  E-value=1.4e-15  Score=99.73  Aligned_cols=57  Identities=30%  Similarity=0.541  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+|+ |...++++|+|++||+|.|++..  .+||+|++..+++.|+||+|||+++
T Consensus         6 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~   62 (62)
T 2iim_A            6 DNLVIALHS-YEPSHDGDLGFEKGEQLRILEQS--GEWWKAQSLTTGQEGFIPFNFVAKA   62 (62)
T ss_dssp             TCEEEESSC-BCCCSTTBCCBCTTCEEEEEECC--SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CcEEEEccc-CCCCCCCCcCCCCCCEEEEEEcC--CCEEEEEECCCCCEEEEEHHHEEEC
Confidence            468999999 66788899999999999999974  3799999877899999999999874

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.60  E-value=1.3e-15  Score=102.44  Aligned_cols=61  Identities=16%  Similarity=0.249  Sum_probs=52.9

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      .-..++|+|+ |....+++|+|++||+|.|++... ..||+|++.++++.|+||+|||+++..
T Consensus         5 ~~~~~~al~~-y~~~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~fP~~yv~~~~~   65 (71)
T 2fpf_A            5 HEQTHRAIFR-FVPRHEDELELEVDDPLLVELQAE-DYWYEAYNMRTGARGVFPAYYAIEVTK   65 (71)
T ss_dssp             CCCCEEECSC-BCCSSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTTEEEEEEGGGEEECC-
T ss_pred             cCeEEEECee-ECccCCCcccCcCCcEEEEeEecC-CCEEEEEECCCCCEEEeehHHEEECCC
Confidence            3467899999 667888999999999999998664 579999987899999999999998763

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.59  E-value=1.1e-15  Score=101.94  Aligned_cols=58  Identities=19%  Similarity=0.371  Sum_probs=50.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCC---ccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTF---NIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg---~~G~FP~n~V~p~   84 (161)
                      +..++|+|+ |...++++|+|++||+|.|++... .+||+|++..++   +.|+||+|||+++
T Consensus         7 ~~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFP-YKSDYEDDLNFEKDQEIIVTSVED-AEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSC-BCCSCTTBCCBCTTCEEEEEEECS-SSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECee-ECcCCcCCCCCCCCCEEEEEEecC-CCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            468999999 667888999999999999999754 579999987777   9999999999874

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.59  E-value=2.1e-15  Score=100.98  Aligned_cols=60  Identities=20%  Similarity=0.472  Sum_probs=52.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |....+++|+|++||+|.|++...+.+||+|++.++++.|+||+|||+++..
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            7 KRGIVQYD-FMAESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CEEEEccc-CCCCCCCcccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCC
Confidence            67899999 6677889999999999999997645689999987789999999999998763

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.59  E-value=1.7e-15  Score=117.50  Aligned_cols=91  Identities=22%  Similarity=0.412  Sum_probs=71.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGH  105 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtgh  105 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++.  +.+||+|++..+|+.|+||+|||++...+                  
T Consensus        13 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~vP~~yv~~~~~l------------------   71 (175)
T 4d8k_A           13 NLVIALHS-YEPSHDGDLGFEKGEQLRILEQ--SGEWWKAQSLTTGQEGFIPFNFVAKANSL------------------   71 (175)
T ss_dssp             CEEEESSC-BCCCSSSBCCBCTTCEEEEEEC--CSSEEEEEETTTCCEEEEEGGGEEETTCS------------------
T ss_pred             cEEEEccC-cCCcCCcccccccCCEEEEEcc--CCCEEEEEECCCCceeeeccccccccccc------------------
Confidence            57999999 6678889999999999999997  45799999877899999999999987421                  


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCccccCCc--cc--cCCCCCeeEeeehh
Q psy2788         106 GDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQ--GSQNGGATVAHRST  153 (161)
Q Consensus       106 g~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~--~~~ng~~~~~~r~~  153 (161)
                         ....|          +.+.|.+   ..++  |.  ...+|+||||..++
T Consensus        72 ---~~~~w----------~~g~isr---~~ae~lL~~~~~~~G~FLVR~S~~  107 (175)
T 4d8k_A           72 ---EPEPW----------FFKNLSR---KDAERQLLAPGNTHGSFLIRESES  107 (175)
T ss_dssp             ---TTCTT----------BCSSCCH---HHHHHHHHSTTCCTTCEEEEECSS
T ss_pred             ---cccce----------ecCcccH---HHHHHHHhcCCCCCCEEEEEECCC
Confidence               11445          6677776   3344  43  35799999997654

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.58  E-value=2.6e-15  Score=100.42  Aligned_cols=59  Identities=27%  Similarity=0.478  Sum_probs=47.2

Q ss_pred             ceEEEecccCCCC------CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEID------EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~------e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +.++|++.| .+.      ++++|+|++||+|+|++...+..||+|++.++++.|+||+|||++++
T Consensus         5 p~~~~~~~y-~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C            5 PKMEVFQEY-YGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             CEEEECSCB-SSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             CcceEEEEE-EecCCCCCCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            455666663 232      23499999999999999755678999998889999999999999874

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.58  E-value=2.1e-15  Score=98.67  Aligned_cols=58  Identities=22%  Similarity=0.305  Sum_probs=50.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +..++|+|| |...++++|+|++||+|.|++... ..||+|++.++++.|+||+|||+++
T Consensus         6 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            6 LRTYRAMYD-YSAQDEDEVSFRDGDYIVNVQPID-DGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             --CEEESSC-BCCCSTTBCCBCTTCEEEEEEECS-SSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CEEEEECee-eCCcCCCcCCCCCCCEEEEEEeCC-CCeEEEEECCCCCEEEEeHHHeEEC
Confidence            578999999 667788999999999999999764 5799999987899999999999875

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.58  E-value=1.6e-15  Score=102.20  Aligned_cols=59  Identities=14%  Similarity=0.184  Sum_probs=52.2

Q ss_pred             CceEEEecccCCC-CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEI-DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~-~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |.. .++++|+|++||+|.|++... ..||+|++.++++.|+||+|||+++.
T Consensus         7 ~~~~~Alyd-y~~~~~~~eLsf~~Gd~i~v~~~~~-~~W~~g~~~~~g~~G~~P~~yv~~~~   66 (71)
T 2gqi_A            7 GRRVRAILP-YTKVPDTDEISFLKGDMFIVHNELE-DGWMWVTNLRTDEQGLIVEDLVEEVS   66 (71)
T ss_dssp             CCCEEESSC-CCCCTTSSCCCCCTTCBCCCCEECS-SSCEEEECTTTCCEEEECTTSEEECC
T ss_pred             CCEEEECcc-cCCCCCCCCCCCCCCCEEEEEEecC-CCEEEEEECCCCCEEEeeHHHEEECC
Confidence            467999999 667 788999999999999999764 57999998889999999999999874

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=3.5e-15  Score=99.66  Aligned_cols=58  Identities=22%  Similarity=0.423  Sum_probs=52.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|.|++... ..||+|++.++++.|+||++||+++.
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ct3_A            8 TPYRAMYQ-YRPQNEDELELREGDRVDVMQQCD-DGWFVGVSRRTQKFGTFPGNYVAPVS   65 (70)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTEEEEEEEECS-SSCEEEEESSSCCEEEECTTTEEETT
T ss_pred             cEEEECcc-CCcCCcCCccCCCCCEEEEEEECC-CCEEEEEECCCCCEEEechHHeEECC
Confidence            57899999 667888999999999999999764 57999999888999999999999875

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.57  E-value=1.8e-15  Score=97.75  Aligned_cols=57  Identities=19%  Similarity=0.299  Sum_probs=50.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+++ |...++++|+|++||+|.|++... .+||.|++..+++.|+||++||+++
T Consensus         2 ~~~~al~d-~~~~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            2 QRAVALYD-FEPENDNELRLAEGDIVFISYKHG-QGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEEECSC-BCCCSTTBCCBCTTCEEEEEEEEE-TTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CEEEECcc-CCCCCCCCcCCCCCCEEEEEEcCC-CCeEEEEECCCCCEEEEehHHeEEC
Confidence            36899999 667788999999999999999754 5799999987799999999999875

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.57  E-value=3.7e-15  Score=101.48  Aligned_cols=59  Identities=19%  Similarity=0.293  Sum_probs=52.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++... .+||.|++.++++.|+||+|||+.+..
T Consensus         6 ~~~~Alyd-y~a~~~~eLs~~~Gd~i~v~~~~~-~gWw~g~~~~~g~~G~~P~~yv~~~~~   64 (73)
T 2lcs_A            6 QRAVALYD-FEPENDNELRLAEGDIVFISYKHG-QGWLVAENESGSKTGLVPEEFVSYIQP   64 (73)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEEEET-TTEEEEECTTSSCEEEEESTTEEECCS
T ss_pred             CEEEECcc-CCCCCCCccCCcCCCEEEEEEEcC-CCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            57899999 667888999999999999999754 579999998789999999999998753

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.57  E-value=6.5e-15  Score=100.27  Aligned_cols=61  Identities=13%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             CceEEEecccCCCC-CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          25 PAVMKATQNCHEID-EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        25 P~~vrAl~d~~~~~-e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      +..++|+|+ |... .+++|+|++||+|.|++...+.+||+|++. +++.|+||++||+++...
T Consensus         9 ~~~~~al~d-y~~~~~~~eLs~~~Gd~i~v~~~~~~~gW~~g~~~-~g~~G~~P~~yv~~~~~~   70 (77)
T 2enm_A            9 ATKARVMYD-FAAEPGNNELTVTEGEIITVTNPNVGGGWLEGKNN-KGEQGLVPTDYVEILPND   70 (77)
T ss_dssp             CEEEEESSC-CCCCTTSSBCCCCTTCEEEEEESCCSSSEEEEECT-TCCEEEEETTTEEEECCC
T ss_pred             CcEEEECcc-CCCCCCCCeecCCCCCEEEEeEccCCCCeEEEEEC-CCCEEEeehHHeEECCCC
Confidence            578999999 6676 788999999999999997545689999975 699999999999988643

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.57  E-value=3.3e-15  Score=100.28  Aligned_cols=58  Identities=22%  Similarity=0.303  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++...+.+||+|++. +++.|+||+|||++..
T Consensus        12 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           12 TECIAKYN-FHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNK-VGREGIIPANYVQKRE   69 (71)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEEECSSTTEEEEECT-TSCEEEEETTSEEC--
T ss_pred             CEEEEcee-ECcCCCCcCCCCCCCEEEEeECCCCCCCEEEEeC-CCCEEEEehHHeEEcc
Confidence            56899999 6678889999999999999994445689999974 8999999999999864

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.57  E-value=2e-15  Score=98.01  Aligned_cols=57  Identities=21%  Similarity=0.461  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |...++++|+|++||+|.|++...+..||.|++. +++.|+||+|||+++
T Consensus         4 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~-~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            4 VRVRALYD-YDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLD-SGQLGLYPANYVEAI   60 (60)
T ss_dssp             CEEEECSC-BCCSSSSBCCBCTTCEEEECSCCCSSSEEEEECS-SCCEEEEEGGGEEC-
T ss_pred             CEEEECcc-cCccCCCcccCCCCCEEEEEEccCCCCceEEEeC-CCCEEEecHHHEEEC
Confidence            46899999 6677889999999999999997655589999974 799999999999863

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.57  E-value=8.2e-15  Score=100.45  Aligned_cols=61  Identities=18%  Similarity=0.402  Sum_probs=53.0

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCC---ccceecCCCeeecCC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTF---NIGMFPRNIMDPMRR   86 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg---~~G~FP~n~V~p~~~   86 (161)
                      .+..++|+|+ |...++++|+|++||+|.|++... ..||+|++..++   +.|+||+|||+++..
T Consensus         6 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~   69 (80)
T 1ue9_A            6 SGEIAQVTSA-YVASGSEQLSLAPGQLILILKKNT-SGWWQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CCEEEEECSC-CCCCSTTBCCCCTTCEEEEEEECS-SSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCeEEEECcc-cCCCCCCCCCCCCCCEEEEEEecC-CCcEEEEECCCCCCCcEEEEchHHeEECCC
Confidence            4678999999 667888999999999999999765 579999987664   999999999998753

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.57  E-value=3.3e-15  Score=96.39  Aligned_cols=56  Identities=32%  Similarity=0.660  Sum_probs=49.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      |..++|+++ |.+.++++|+|++||+|.|++... ..||.|++  +++.|+||++||+++
T Consensus         2 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            2 PTYVQALFD-FDPQEDGELGFRRGDFIHVMDNSD-PNWWKGAC--HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             -CEEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CeEEEECce-ECCCCcCCcCCCCCCEEEEEEcCC-CCEEEEEE--CCcEEEEchHHeEEC
Confidence            568899999 667888999999999999999654 57999998  789999999999875

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.57  E-value=3.5e-15  Score=96.55  Aligned_cols=56  Identities=23%  Similarity=0.477  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++... ..||.|++  +++.|+||++||+++.
T Consensus         2 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            2 VEAIVEFD-YQAQHDDELTISVGEIITNIRKED-GGWWEGQI--NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CCEEESSC-BCCCSTTBCCBCTTCEEEEEECCT-TTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             EEEEECcc-cCCCCcCEeeECCCCEEEEEEeCC-CCEEEEEE--CCeEEEEehHHeEEcC
Confidence            46889999 667888999999999999999754 57999997  7899999999999864

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.57  E-value=3.9e-15  Score=96.18  Aligned_cols=56  Identities=27%  Similarity=0.580  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+++ |.+.++++|+|++||+|.|++.. +..||.|++  +++.|+||+|||+++.
T Consensus         2 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            2 RWARALYD-FEALEEDELGFRSGEVVEVLDSS-NPSWWTGRL--HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             eEEEECcc-CCCCCcCCCCCCCCCEEEEEEEC-CCCEEEEEE--CCeEEEeeHHHeEEcc
Confidence            46889999 66788899999999999999965 457999997  6899999999999864

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=5.7e-15  Score=102.14  Aligned_cols=59  Identities=15%  Similarity=0.294  Sum_probs=52.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++...+..||+|++.++++.|+||+|||++..
T Consensus        18 ~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           18 TQCITKCE-HTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             CEEEESSC-BSSCCTTCCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECCC-CCcCCCCCCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            47899999 667888999999999999999765557999998778999999999999864

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.56  E-value=3e-15  Score=99.43  Aligned_cols=58  Identities=21%  Similarity=0.389  Sum_probs=51.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... .+||+|++..+++.|+||+|||+++.
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (67)
T 2o9s_A            7 GEAIAKFN-FNGDTQVEMSFRKGERITLLRQVD-ENWYEGRIPGTSRQGIFPITYVDVIK   64 (67)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEEECS-SSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred             EEEEECcc-CCcCCcCccCCCCCCEEEEEEecC-CCEEEEEECCCCCEEEEChHHeEECC
Confidence            56899999 667788999999999999999654 57999999877899999999999864

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.56  E-value=4.2e-15  Score=99.93  Aligned_cols=58  Identities=21%  Similarity=0.396  Sum_probs=51.0

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ....++|+|| |...++++|+|++||+|.|++... .+||+|++  +++.|+||+|||+.+.
T Consensus         2 ~~~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   59 (68)
T 2ew3_A            2 DQPCCRGLYD-FEPENQGELGFKEGDIITLTNQID-ENWYEGMI--HGESGFFPINYVEVIV   59 (68)
T ss_dssp             CCCEEEESSC-BCCCSTTBCCBCTTCEEEEEEESS-SSEEEEEE--TTEEEEEEGGGEEESC
T ss_pred             CCCEEEEeee-ECCCCCCccCCCCCCEEEEEEecC-CCEEEEEE--CCcEEEeeHHHEEEcC
Confidence            3568999999 667888999999999999999754 57999996  7899999999999876

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.56  E-value=4.3e-15  Score=99.94  Aligned_cols=58  Identities=24%  Similarity=0.500  Sum_probs=51.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +..++|+|| |...++++|+|++||+|.|++... ..||+|++..+++.|+||+|||+++
T Consensus        15 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           15 VTLFVALYD-YEAITEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             TCEEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEEECcc-CCCCCCCcceEeCCCEEEEEEecC-CCeEEEEECCCCCEEEEEHHHeEEC
Confidence            468999999 667888999999999999999764 5799999877899999999999985

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.56  E-value=7.3e-15  Score=98.09  Aligned_cols=58  Identities=19%  Similarity=0.331  Sum_probs=51.2

Q ss_pred             ceEEEecccC-CCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCH-EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~-~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +.++|+|| | ...++++|+|++||+|.|++.. +.+||.|++..+++.|+||+|||+++.
T Consensus         3 ~~~~alyd-y~~~~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~~~~g~~G~~P~~yv~~~~   61 (69)
T 1ruw_A            3 PKFEAAYD-FPGSGSSSELPLKKGDIVFISRDE-PSGWSLAKLLDGSKEGWVPTAYMTPYK   61 (69)
T ss_dssp             SEEEESSC-BCCCSCTTBCCBCTTCEEEEEEEC-TTSEEEEEETTSSCEEEEEGGGEEECC
T ss_pred             cEEEEccc-cCCCCCCCcccCCCCCEEEEEEec-CCCeEEEEECCCCCEEEEehHHeEEcC
Confidence            56899999 5 3678899999999999999976 457999999878999999999999875

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.56  E-value=6.3e-15  Score=100.43  Aligned_cols=59  Identities=20%  Similarity=0.399  Sum_probs=50.5

Q ss_pred             CCceEEEecccCCCCC-------CCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDE-------EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e-------~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+..++|+|| |...+       +++|+|++||+|.|++...+..||+|++  +++.|+||+|||+++.
T Consensus         6 ~~~~~~Alyd-y~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~--~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A            6 SGKIMIAALD-YDPGDGQMGGQGKGRLALRAGDVVMVYGPMDDQGFYYGEL--GGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             CSEEEEESSC-BCTTTTCCCSSSCCBCCBCTTCEEEEESCCCTTCEEEEES--SSCEEEEETTTEEECC
T ss_pred             CCcEEEECCC-CCCCccccCCCCCCcceECCCCEEEEeEccCCCCEEEEEE--CCcEEEEChHHeEEcc
Confidence            3568999999 66777       7899999999999997544568999996  7899999999999874

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.56  E-value=5.3e-15  Score=96.14  Aligned_cols=57  Identities=26%  Similarity=0.498  Sum_probs=49.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+++ |...++++|+|++||+|.|++... +..||+|++  +++.|+||++||+.+
T Consensus         3 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~l   60 (60)
T 1oot_A            3 SPKAVALYS-FAGEESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPANYVELV   60 (60)
T ss_dssp             CCEEEESSC-BCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             ccEEEECcc-CCcCCcCEeeEcCCCEEEEEEeCCCCCCeEEEEE--CCEEEEEeHHHEEEC
Confidence            367899999 667788999999999999999752 468999997  789999999999863

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.56  E-value=3.4e-15  Score=104.27  Aligned_cols=61  Identities=28%  Similarity=0.504  Sum_probs=50.8

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCC----CCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS----TFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r----tg~~G~FP~n~V~p~~   85 (161)
                      ....++|+|||-...++++|+|++||+|.|++... .+||+|++..    ++++|+||+|||+++.
T Consensus        17 ~~~~~~Alydy~~a~~~~eLsf~~GDiI~V~~~~~-~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           17 GSLKVRALKDFWNLHDPTALNVRAGDVITVLEQHP-DGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             CCEEEEESSCBCCCSCTTBCCBCTTCEEEESCSSC-SSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CCeEEEEccccCCCCCCCcccccCCCEEEEEEecC-CCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            34679999993156778999999999999999765 4699999753    5899999999999874

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.56  E-value=4.1e-15  Score=99.45  Aligned_cols=58  Identities=21%  Similarity=0.372  Sum_probs=51.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++..+++.|+||+|||+++.
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2ecz_A            8 GEAIAKFN-FNGDTQVEMSFRKGERITLLRQVD-ENWYEGRIPGTSRQGIFPITYVDVIS   65 (70)
T ss_dssp             BCEEESSC-CCCCSTTBCCCCTTCBCEEEEEEE-TTEEEEEETTTTEEEEECTTTEEESS
T ss_pred             CEEEECcc-CCCCCcCCcCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEEchHHEEECC
Confidence            57899999 667788999999999999999654 57999999877899999999999875

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=4.7e-15  Score=104.20  Aligned_cols=59  Identities=24%  Similarity=0.362  Sum_probs=51.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. +.+||+|++.++++.|+||+|||+.+..
T Consensus        18 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~fP~~yv~~~~~   76 (90)
T 2yup_A           18 GEAVAQYT-FKGDLEVELSFRKGEHICLIRKV-NENWYEGRITGTGRQGIFPASYVQVSRE   76 (90)
T ss_dssp             EEEEECSC-CCCCSSSBCCCCTTCEEEESSCC-CSSEEEEECTTTCCEEEEEGGGEEEEEC
T ss_pred             eEEEEeec-CCcCCcCcCCCCCCCEEEEEEEc-CCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence            57899999 66778899999999999999965 4679999987789999999999998753

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.56  E-value=4.4e-15  Score=101.19  Aligned_cols=60  Identities=18%  Similarity=0.425  Sum_probs=51.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.. +..||+|++.. +++.|+||+|||+++..
T Consensus        10 ~~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~   70 (76)
T 2ed1_A           10 VRRVKTIYD-CQADNDDELTFIEGEVIIVTGEE-DQEWWIGHIEGQPERKGVFPVSFVHILSD   70 (76)
T ss_dssp             CEEEEESSC-CCCSSSSBCCCCSSCEEEESSCC-SSSEEEEEETTCTTCEEEEEGGGEEECCC
T ss_pred             CeEEEECcc-CCCCCcCCcCcCCCCEEEEEEec-CCCEEEEEECCCCCCEEEEehHHeEECCC
Confidence            467899999 66788899999999999999854 45799999753 57999999999999864

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.55  E-value=5.7e-15  Score=96.12  Aligned_cols=56  Identities=30%  Similarity=0.563  Sum_probs=49.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+++ |.+.++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++
T Consensus         5 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            5 SPQCKALYA-YDAQDTDELSFNANDIIDIIKEDP-SGWWTGRL--RGKQGLFPNNYVTKI   60 (60)
T ss_dssp             SCEEEESSC-BCCSSTTBCCBCTTCEEEEEEECT-TSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CcEEEECcc-CCcCCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCEEEEEcHHHEEEC
Confidence            468999999 667888999999999999999764 57999997  789999999999864

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.55  E-value=3.6e-15  Score=95.19  Aligned_cols=53  Identities=30%  Similarity=0.490  Sum_probs=46.8

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      .++|+++ |.+.++++|+|++||+|.|++...+..||+|++  +++.|+||++||+
T Consensus         2 ~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~--~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYA-YEAQGDDEISIDPGDIITVIRGDDGSGWTYGEC--DGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSC-BCCCSTTBCCBCTTCEEEEEECCCSSSEEEEEE--TTEEEEEEGGGBC
T ss_pred             EEEECcc-CCcCCCCCccCCCCCEEEEEEecCCCCEEEEEE--CCeEEEeeHHHcC
Confidence            5789999 667888999999999999999775457999998  7899999999985

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.55  E-value=5.2e-15  Score=98.58  Aligned_cols=58  Identities=21%  Similarity=0.324  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCC--CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEID--EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~--e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      |..++|+|+ |...  ++++|+|++||+|.|++... ..||+|..  +++.|+||+|||+++..
T Consensus         1 p~~~~al~d-y~~~~~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~fP~~yv~~~~~   60 (67)
T 2bzy_A            1 PVFAKAIQK-RVPCAYDKTALALEVGDIVKVTRMNI-NGQWEGEV--NGRKGLFPFTHVKIFDP   60 (67)
T ss_dssp             CEEEEECSC-BCSEEECTTBCCBCTTCEEEEEEECS-SSEEEEEE--TTEEEEEEGGGEEECCS
T ss_pred             CcEEEEeee-ECCCCCCCCccccCCCCEEEEEEecC-CCeEEEEe--CCcEEEEehHHeEECCC
Confidence            567899999 6566  78899999999999999764 57999974  68999999999999863

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.55  E-value=2.8e-15  Score=103.00  Aligned_cols=58  Identities=16%  Similarity=0.339  Sum_probs=52.1

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.  +..||+|++.++++.|+||++||+++.
T Consensus        17 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~--~~gW~~g~~~~~g~~G~fP~~yv~~~~   74 (79)
T 1x6b_A           17 LPQVEITKA-FFAKQADEVTLQQADVVLVLQQ--EDGWLYGERLRDGETGWFPEDFARFIS   74 (79)
T ss_dssp             CCEEEESSC-CCCCSSSBCCCCTTEEEEEEEE--ETTEEEEEETTTCCEEEECGGGCEEEE
T ss_pred             CCEEEECee-ECCCCcCCcCCCCCCEEEEEEe--CCCEEEEEECCCCCEEEEchHHEEECC
Confidence            367999999 6678889999999999999998  568999999878999999999999875

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.55  E-value=3.5e-15  Score=96.22  Aligned_cols=55  Identities=22%  Similarity=0.326  Sum_probs=48.4

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      .++|+|+ |....+++|+|++||+|.|++...+..||+|++.++++.|+||+|||+
T Consensus         3 ~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            3 ENKVLYA-YVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CCEECSC-BCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             EEEEeee-ECCcCCCcccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            4789999 667888999999999999999765357999998768999999999986

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=7.4e-15  Score=100.66  Aligned_cols=60  Identities=18%  Similarity=0.287  Sum_probs=52.3

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .|..++|+|+ |...++++|+|++||+|.|++...+..||+|++. +++.|+||+|||+.+.
T Consensus        12 ~~~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~   71 (78)
T 2dl5_A           12 YPLTCKVVYS-YKASQPDELTIEEHEVLEVIEDGDMEDWVKARNK-VGQVGYVPEKYLQFPT   71 (78)
T ss_dssp             SSEEEEECSC-BCCCSTTBCCBCSSEEEEEEECCSSSSEEEEECT-TCCEEEEETTTSCCSC
T ss_pred             CCcEEEEcee-ECCCCCCCCCCCCCCEEEEEeccCCCCcEEEEeC-CCCEEEEEhHHEEECC
Confidence            4678999999 6678889999999999999997643579999985 5899999999999875

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.55  E-value=6.9e-15  Score=95.87  Aligned_cols=57  Identities=19%  Similarity=0.303  Sum_probs=49.9

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ++..++|+|+ |.+.++++|+|++||+|.|++.. +..||.|++  +++.|+||+|||+++
T Consensus         3 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            3 KHMRAEALFD-FTGNSKLELNFKAGDVIFLLSRI-NKDWLEGTV--RGATGIFPLSFVKIL   59 (60)
T ss_dssp             CSCEEEESSC-BCCSSTTBCCBCTTCEEEEEEEC-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             cCcEEEECcc-CCcCCCCCccCCCCCEEEEEEeC-CCCeEEEEE--CCCEEEechHHEEEC
Confidence            3578999999 66778899999999999999976 457999996  689999999999875

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.55  E-value=5.6e-15  Score=96.89  Aligned_cols=56  Identities=21%  Similarity=0.342  Sum_probs=49.4

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .++|+|+ |...++++|+|++||+|.|++...+.+||+|+.  +++.|+||+|||+++.
T Consensus         3 ~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   58 (62)
T 2j6f_A            3 DYIVEYD-YDAVHDDELTIRVGEIIRNVKKLQEEGWLEGEL--NGRRGMFPDNFVKEIK   58 (62)
T ss_dssp             CEEECSC-BCCSSTTBCCBCTTCEEEEEEECSSTTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             EEEECcc-CCcCCcCCcCCcCCCEEEEEEecCCCCEEEEEE--CCcEEEechHHEEECC
Confidence            5889999 667788999999999999999744568999995  7899999999999875

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.55  E-value=7.5e-15  Score=98.82  Aligned_cols=56  Identities=16%  Similarity=0.411  Sum_probs=49.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++..  .+||+|++. +++.|+||+|||+...
T Consensus         5 ~~~~Alyd-y~a~~~~ELsf~~Gd~i~vl~~~--~~Ww~~~~~-~g~~G~~Psnyv~~~~   60 (67)
T 2b86_A            5 VIVIAKWD-YTAQQDQELDIKKNERLWLLDDS--KTWWRVRNA-ANRTGYVPSNYVERKL   60 (67)
T ss_dssp             EEEEESSC-BCCSSTTSCCBCTTCEEEEEECS--SSSCEEECT-TSCEEECCCCSEEEC-
T ss_pred             eEEEEeee-ECCCCCCccccCCCCEEEEEecC--CCeEEEEeC-CCCEEEeChHHEeEcC
Confidence            56899999 66788899999999999999974  479999975 7899999999999875

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.55  E-value=8.7e-15  Score=98.73  Aligned_cols=58  Identities=26%  Similarity=0.510  Sum_probs=50.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++.. .+.+||+|+.  +++.|+||+|||+++..
T Consensus         3 ~~~~Alyd-y~a~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~--~g~~G~~P~~yV~~~~~   61 (69)
T 2ydl_A            3 DYCKVIFP-YEAQNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLPP   61 (69)
T ss_dssp             EEEEESSC-BCCCSTTBCCBCTTCEEEEEESCCSSTTEEEEEE--TTEEEEEEGGGEEECCS
T ss_pred             cEEEEccc-CCCCCCCccccCCCCEEEEEEcCCCCCCEEEEEE--CCcEEEecHHHEEECCC
Confidence            46899999 66788899999999999999975 3567999996  78999999999998763

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.55  E-value=6.3e-15  Score=95.32  Aligned_cols=55  Identities=25%  Similarity=0.550  Sum_probs=48.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+++ |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++
T Consensus         3 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQ-FDPQQDGDLGLKPGDKVQLLEKLS-PEWYKGSC--NGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSC-BCCCSTTBCCBCTTCEEEEEEECS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             eEEEECce-ECCCCCCCccCCCCCEEEEEEecC-CCEEEEEE--CCcEEEeeHHHEEEc
Confidence            57899999 667888999999999999999764 57999996  789999999999875

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.55  E-value=1.3e-14  Score=97.29  Aligned_cols=59  Identities=22%  Similarity=0.451  Sum_probs=51.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. .+.+||+|++. +++.|+||+|||+++..
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~~   66 (71)
T 1u5s_A            7 HVVQTLYP-FSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SEEEESSC-CCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEET-TTEEEEEETTSEEECCC
T ss_pred             EEEEEccc-CCCCCCCcccCCCCCEEEEEECCCCCCCCEEEEeC-CCCEEEEeHHHEEECCC
Confidence            67899999 66778899999999999999973 35689999974 68999999999999863

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.55  E-value=3.8e-15  Score=99.47  Aligned_cols=59  Identities=22%  Similarity=0.367  Sum_probs=52.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |....+++|+|++||+|.|++... ..||+|++..+++.|+||++||+++.
T Consensus         7 ~~~~~al~~-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~   65 (70)
T 2cuc_A            7 GNMFVALHT-YSAHRPEELDLQKGEGIRVLGKYQ-DGWLKGLSLLTGRTGIFPSDYVIPVS   65 (70)
T ss_dssp             SCCEECCSC-BCCCSTTBCCBCTTCEEEEEEEEE-TTEEEEEETTTCCEEEEEGGGCEECC
T ss_pred             CcEEEECee-ECcCCCCcCCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEEchHHeEECc
Confidence            467899999 667888999999999999999764 57999998789999999999999975

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.55  E-value=3.4e-15  Score=104.36  Aligned_cols=79  Identities=20%  Similarity=0.445  Sum_probs=59.3

Q ss_pred             CCCCCCCCCCCChhhhH-----HHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccce
Q psy2788           1 MKATKNPAERPKFSTLK-----DCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGM   75 (161)
Q Consensus         1 ~~~~~~P~~RP~F~~l~-----~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~   75 (161)
                      |+.+.-|..-|.|..+.     +.|....-..++|+|| |...++++|+|++||+|.|++.  +.+||+|++. +++.|+
T Consensus         2 ~~~~pP~~~~p~~~~~~~~~~~~~~~~~~~~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~   77 (86)
T 2jxb_A            2 MKERPPPVPNPDYNSLKKGSLVKNLHMTEEVIVIAKWD-YTAQQDQELDIKKNERLWLLDD--SKTWWRVRNA-ANRTGY   77 (86)
T ss_dssp             CCCCCCCCSCCCSCCSSSCCCCCCCCCCCCEEEEESSC-CCCCSSSBCCCCTTEEEEEEEC--CSSEEEEECT-TSCEEE
T ss_pred             ccCCCCCCCCccccCcCCCcccccccCCCceEEEECcc-CCCCCCCEeccCCCCEEEEEec--CCCeEEEEEC-CCCEEE
Confidence            45555566666666543     1222212256899999 6678889999999999999996  3579999975 789999


Q ss_pred             ecCCCeee
Q psy2788          76 FPRNIMDP   83 (161)
Q Consensus        76 FP~n~V~p   83 (161)
                      ||+|||++
T Consensus        78 ~P~~yv~~   85 (86)
T 2jxb_A           78 VPSNYVER   85 (86)
T ss_dssp             EEGGGBCC
T ss_pred             eehHHEEe
Confidence            99999975

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.55  E-value=6.3e-15  Score=127.49  Aligned_cols=98  Identities=16%  Similarity=0.197  Sum_probs=74.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGH  105 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtgh  105 (161)
                      ..++|+|| |.+.++++|+|++||+|+|++...+.+||+|++. +|+.|+||+|||++...     ++.+..-       
T Consensus        12 ~~~~aly~-~~~~~~~el~~~~gd~i~v~~~~~~~~ww~~~~~-~g~~G~~P~~yv~~~~~-----~~~~~~~-------   77 (450)
T 1k9a_A           12 TECIAKYN-FHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKNK-VGREGIIPANYVQKREG-----VKAGTKL-------   77 (450)
T ss_dssp             CEEEESSC-BCCSSSSBCCBCTTCEEEEEEECSSTTEEEEECT-TCCEEEEEGGGEEECCC-----CCCCTTE-------
T ss_pred             CEEEECCC-cCccCCCcCCCCCCCEEEEeeccCCCCceEEEEC-CCceeeechhccccccc-----ccccccc-------
Confidence            57899999 7788889999999999999998556689999975 79999999999998642     1111100       


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCeeEeeehh
Q psy2788         106 GDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGATVAHRST  153 (161)
Q Consensus       106 g~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r~~  153 (161)
                         ....|          +.++|.+   ..++  |.+..||.||||..++
T Consensus        78 ---~~~~w----------yhg~i~r---~~ae~~L~~~~~G~FlvR~S~~  111 (450)
T 1k9a_A           78 ---SLMPW----------FHGKITR---EQAERLLYPPETGLFLVRESTN  111 (450)
T ss_dssp             ---ESCTT----------BCTTCCH---HHHHHHTCSCCTTEEEEEECSS
T ss_pred             ---ccccc----------cccCcCH---HHhhhhhccCCCceEEEEecCC
Confidence               11344          8888887   3344  6666789999998654

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.54  E-value=1.2e-14  Score=96.63  Aligned_cols=56  Identities=21%  Similarity=0.519  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+..+++|+|++||+|.|++.. +.+||+|++. +++.|+||+|||+++
T Consensus         3 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~-~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYD-FQATEAHDLRLERGQEYIILEKN-DLHWWRARDK-YGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSC-BCCSSSSBCCBCTTCEEEEEECS-SSSEEEEECS-SSCEEEEETTSEESS
T ss_pred             eEEEECcc-CCCCCCCeecCCcCCEEEEEEcc-CCCcEEEEEC-CCCEEEEEhHhEEEc
Confidence            46899999 66788899999999999999975 4579999975 689999999999997

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.54  E-value=6.7e-15  Score=94.76  Aligned_cols=56  Identities=20%  Similarity=0.387  Sum_probs=48.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+++ |...++++|+|++||+|.|++... .+||+|++. .++.|+||+|||+++
T Consensus         2 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~   57 (57)
T 1cka_A            2 EYVRALFD-FNGNDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEKY   57 (57)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-SSEEEEECT-TSCEEEEEGGGEEC-
T ss_pred             cEEEECCc-CCCCCCCCCCCCCCCEEEEEEecC-CCcEEEEeC-CCCEEEEeHHHEEEC
Confidence            46889999 667788999999999999999654 579999975 589999999999864

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.54  E-value=7.8e-15  Score=95.75  Aligned_cols=59  Identities=17%  Similarity=0.381  Sum_probs=51.4

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+..++|+|| |....+++|+|++||+|.|++...+..||.|++  +++.|+||+|||+++.
T Consensus         4 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            4 DPNLFVALYD-FVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSAYITPVN   62 (63)
T ss_dssp             CTTEEEESSC-BCCCSSSBCCBCTTCEEEEEEECTTSSEEEEEE--TTEEEEEEGGGEEESC
T ss_pred             CCEEEEEcce-ECCCCCCccCCCCCCEEEEEEeCCCCCeEEEEE--CCCeEEEehHHeEECC
Confidence            4678999999 667888999999999999999665567999997  6889999999999863

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.54  E-value=8.1e-15  Score=94.53  Aligned_cols=56  Identities=32%  Similarity=0.634  Sum_probs=49.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +..++|+++ |.+.++++|+|++||+|.|++.. +..||.|++  +++.|+||++||+++
T Consensus         2 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            2 TKFVQALFD-FNPQESGELAFKRGDVITLINKD-DPNWWEGQL--NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CCEEEESSC-BCCSSTTBCCBCTTCEEEEEECS-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CeEEEECcC-CCCCCCCCcCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEechHHeEEC
Confidence            467899999 66778899999999999999975 457999997  689999999999875

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.54  E-value=7.7e-15  Score=97.69  Aligned_cols=57  Identities=19%  Similarity=0.384  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++... .+||+|++. +++.|+||+|||++..
T Consensus         4 ~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   60 (65)
T 1b07_A            4 EYVRALFD-FNGNDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEKYH   60 (65)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-SSEEEEECT-TSCEEEEEGGGEEECC
T ss_pred             eEEEECCc-CCCCCCCccCCcCCCEEEEEEecC-CCeEEEEEC-CCCEEEEChHHEeecC
Confidence            57899999 667888999999999999999654 579999964 6899999999999875

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=1.7e-14  Score=96.35  Aligned_cols=59  Identities=27%  Similarity=0.513  Sum_probs=50.9

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ....++|+|+ |...++++|+|++||+|.|++.. +..||+|+.  +++.|+||+|||+++..
T Consensus         6 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~   64 (68)
T 2dl4_A            6 SGNTYVALYK-FVPQENEDLEMRPGDIITLLEDS-NEDWWKGKI--QDRIGFFPANFVQRLSG   64 (68)
T ss_dssp             CCCEEEESSC-CCCSSTTBCCCCTTCEEEEEECC-CSSEEEEEC--SSCEEEEETTTEEECCC
T ss_pred             CCCEEEEeee-ECCCCcCCcCCCCCCEEEEEEeC-CCCEEEEEE--CCcEEEEehHHeEECCC
Confidence            3478899999 66778899999999999999965 457999994  78999999999998853

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.54  E-value=8.5e-15  Score=97.61  Aligned_cols=58  Identities=17%  Similarity=0.405  Sum_probs=50.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. +.+||+|+.  +++.|+||+|||+++...
T Consensus         2 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~fP~~yv~~~~~~   59 (65)
T 2nwm_A            2 KAARLKFD-FQAQSPKELTLQKGDIVYIHKEV-DKNWLEGEH--HGRLGIFPANYVEVLPLE   59 (65)
T ss_dssp             CEEEECSC-BCCCSTTBCCBCTTCEEEEEECC-TTTCEEEEE--TTEEEEECGGGEEECCCC
T ss_pred             cEEEEeee-ECCCCcCccCCcCCCEEEEEEec-CCCEEEEEE--CCcEEEEehhhEEEcCCC
Confidence            46899999 66788899999999999999975 457999994  789999999999987643

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.54  E-value=1.4e-14  Score=96.52  Aligned_cols=57  Identities=28%  Similarity=0.559  Sum_probs=50.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |...++++|+|++||+|.|++.. +..||+|++  +++.|+||++||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~   63 (68)
T 1x2k_A            7 GKVFRALYT-FEPRTPDELYFEEGDIIYITDMS-DTNWWKGTS--KGRTGLIPSNYVAEQS   63 (68)
T ss_dssp             SEEEEESSC-CCCCSTTBCCCCSSCEEEEEECS-CSSEEEEES--SSCEEEEETTTEEECC
T ss_pred             cEEEEECce-ECCCCCCcccCCCCCEEEEEEcC-CCCEEEEEE--CCcEEEEehHHeEEcC
Confidence            467899999 66778899999999999999974 468999996  7899999999999874

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.54  E-value=7.6e-15  Score=101.32  Aligned_cols=61  Identities=23%  Similarity=0.508  Sum_probs=51.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ   88 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~   88 (161)
                      ..++|+|+ |....+++|+|++||+|.|++... .+||+|++.++++.|+||+|||+++...+
T Consensus         6 ~~~~Alyd-y~~~~~~eLs~~~Gd~i~vl~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   66 (79)
T 3cqt_A            6 TLFEALYD-YEARTEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSIYLAPVDRLD   66 (79)
T ss_dssp             CCEEESSC-BCCCSTTBCCBCTTCEEEEEECTT-SSEEEEEETTTCCEEEEEGGGEEEC----
T ss_pred             cEEEECcc-CCCCCcCcCCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEeehHHeEECCccc
Confidence            57899999 667788999999999999999654 58999998778999999999999986443

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.54  E-value=8.1e-15  Score=94.81  Aligned_cols=55  Identities=29%  Similarity=0.585  Sum_probs=48.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ...++|+++ |.+.++++|+|++||+|.|++.. +..||.|++  +++.|+||+|||++
T Consensus         3 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            3 VKVFRALYT-FEPRTPDELYFEEGDIIYITDMS-DTNWWKGTS--KGRTGLIPSNYVAE   57 (58)
T ss_dssp             CEEEEESSC-BCCSSTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             cEEEEECcc-CCCCCCCCccCCCCCEEEEEEeC-CCCEEEEEE--CCCEEEEehHHEEe
Confidence            357899999 66778899999999999999974 467999996  78999999999986

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.54  E-value=1.1e-14  Score=101.63  Aligned_cols=63  Identities=24%  Similarity=0.441  Sum_probs=54.0

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ   88 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~   88 (161)
                      .+..++|+|| |...++++|+|++||+|.|++... .+||+|++..+++.|+||+|||+++....
T Consensus         5 ~~~~~~Alyd-y~a~~~~eLsf~~Gd~i~vl~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   67 (84)
T 4ag1_C            5 GVTLFVALYD-YNATRWTDLSFHKGEKFQILEFGP-GDWWEARSLTTGETGYIPSNYVAPVDSIQ   67 (84)
T ss_dssp             -CCEEEESSC-BCCSBTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEETTTCC
T ss_pred             CCEEEEEccc-CCCCCCCcccccCCCEEEEEEecC-CCeEEEEECCCCCEEEEehHHeEECCCcc
Confidence            4578999999 667788999999999999999764 57999998778999999999999986443

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.53  E-value=1.6e-14  Score=97.53  Aligned_cols=58  Identities=22%  Similarity=0.438  Sum_probs=50.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++..  .+..||+|+  .+++.|+||+|||+++.
T Consensus         8 ~~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~   67 (73)
T 2dl7_A            8 VCFVKALYD-YEGQTDDELSFPEGAIIRILNKENQDDDGFWEGE--FNGRIGVFPSVLVEELS   67 (73)
T ss_dssp             CEEEEESSC-BCCSSTTBCCBCTTCEEEEEECCCSSSSSCEEEE--ETTEEEEECSSSEEECC
T ss_pred             CEEEEECcc-CCcCCCCcCCCCCCCEEEEEECCCCCCCCcEEEE--ECCCEEEEChHHEEECC
Confidence            357899999 66778899999999999999974  356899999  47999999999999875

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.53  E-value=9.6e-15  Score=94.75  Aligned_cols=55  Identities=27%  Similarity=0.547  Sum_probs=48.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||.|++  +++.|+||+|||+++
T Consensus         5 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            5 SVVRAKFN-FQQTNEDELSFSKGDVIHVTRVEE-GGWWEGTH--NGRTGWFPSNYVREI   59 (59)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEEECT-TSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             cEEEECce-eCCCCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCcEEEEeHHHEEEC
Confidence            57899999 667788999999999999999764 57999996  789999999999864

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=7.7e-15  Score=101.04  Aligned_cols=57  Identities=18%  Similarity=0.307  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++.  +..||+|++.++++.|+||+|||+++.
T Consensus        18 ~~~~Alyd-y~a~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~~P~~yv~~~~   74 (79)
T 2cud_A           18 DFLAVLSD-YPSPDISPPIFRRGEKLRVISD--EGGWWKAISLSTGRESYIPGICVARVS   74 (79)
T ss_dssp             CEEEESSC-SSCTTTSCCSSCTTCEEEEEEE--ETTEEEEEETTTCCEEEEEGGGEEEEC
T ss_pred             eEEEEccC-CCCCCCCcCCCCCCCEEEEEec--CCCeEEEEECCCCCEEEeeHHHeEEcc
Confidence            57999999 6678889999999999999994  357999998778999999999999875

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.53  E-value=1.1e-14  Score=93.98  Aligned_cols=56  Identities=23%  Similarity=0.471  Sum_probs=49.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +..++|+++ |...++++|+|++||+|.|++.. +..||.|++  +++.|+||+|||+++
T Consensus         3 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~l   58 (58)
T 2drm_A            3 GIQVKALYD-YDAQTGDELTFKEGDTIIVHQKD-PAGWWEGEL--NGKRGWVPANYVQDI   58 (58)
T ss_dssp             CEEEEESSC-BCCCSTTBCCBCTTCEEEEEECC-TTSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CcEEEECcc-CCCCCcCCcCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEEeHHHEEEC
Confidence            357899999 66788899999999999999975 457999997  789999999999864

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=98.15  Aligned_cols=58  Identities=16%  Similarity=0.303  Sum_probs=50.8

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+..++|+|+ |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++.
T Consensus         8 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   65 (72)
T 2dl8_A            8 EPIEAIAKFD-YVGRTARELSFKKGASLLLYQRAS-DDWWEGRH--NGIDGLIPHQYIVVQD   65 (72)
T ss_dssp             SCEEEEESSC-BCCSSSSBCCBCTTCEEEEEEEEE-TTEEEEEE--TTEEEEECSSSEEECC
T ss_pred             CCEEEEECcc-CCcCCCCEeccCCCCEEEEEeecC-CCEEEEEE--CCEEEEEchHHeEEcC
Confidence            4578999999 667788999999999999999754 57999997  6899999999999875

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.53  E-value=1e-14  Score=100.57  Aligned_cols=58  Identities=22%  Similarity=0.339  Sum_probs=50.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |...++++|+|++||+|+|++...+..||+|+.  +++.|+||+|||+.+..
T Consensus        11 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~--~g~~G~fP~~yv~~~~~   68 (80)
T 2i0n_A           11 KYARALKD-YNVSDTSLLPFKRNDIITITFKDQENKWFMGQL--NGKEGSFPVDHVEILLS   68 (80)
T ss_dssp             CEEEESSC-BCCCSSSSCCBCSSEEEEEEEESSSSSEEEEEE--TTEEEEEEGGGEEEESS
T ss_pred             eEEEECCC-CCcCCCCCcCCCCCCEEEEEEecCCCCEEEEEE--CCcEEEechHHEEECCC
Confidence            67899999 667888999999999999999876544999994  78999999999998764

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.53  E-value=1.1e-14  Score=95.71  Aligned_cols=56  Identities=25%  Similarity=0.440  Sum_probs=48.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++.. .+..||+|+.  +++.|+||+|||+++
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            7 EYCRTLFP-YTGTNEDELTFREGEIIHLISKETGEAGWWKGEL--NGKEGVFPDNFAVQI   63 (64)
T ss_dssp             EEEEESSC-BCCSSSSBCCBCTTCEEEEEESCSSSTTEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             EEEEECcc-CCccCCCccCCCCCCEEEEEECCCCCCCEEEEEE--CCeEEEEeHHHEEEC
Confidence            46899999 66788899999999999999875 2467999995  789999999999876

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.53  E-value=1.4e-14  Score=96.68  Aligned_cols=57  Identities=21%  Similarity=0.482  Sum_probs=50.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|+ |...++++|+|++||+|.|++..  ..||+|++ .+++.|+||++||+++.
T Consensus         7 ~~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~   63 (68)
T 1wxt_A            7 GLKMQVLYE-FEARNPRELTVVQGEKLEVLDHS--KRWWLVKN-EAGRSGYIPSNILEPLS   63 (68)
T ss_dssp             CEEEEESSC-BCCCSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCEEEEEGGGEECCC
T ss_pred             CeEEEECce-ECCCCcCcCCCCCCCEEEEEEcC--CCEEEEEE-CCCCEEEEEhHHcEECC
Confidence            567899999 66788899999999999999974  57999998 58999999999999875

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=1.9e-14  Score=100.61  Aligned_cols=63  Identities=25%  Similarity=0.611  Sum_probs=52.9

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD   91 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~   91 (161)
                      ...++|+|| |...++++|+|++||+|.|++.. +..||+|++  .++.|+||+|||+++....++.
T Consensus        17 ~~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~~~~   79 (88)
T 1x2q_A           17 ARKVRALYD-FEAVEDNELTFKHGEIIIVLDDS-DANWWKGEN--HRGIGLFPSNFVTTNLNIETEA   79 (88)
T ss_dssp             CEEEEESSC-CCCCSSSCCCCCSSCEEEEEECS-CSSSEEEEE--TTEEEEECGGGEESCSSCCSCC
T ss_pred             CeEEEEccc-CCCCCcCccCCCCCCEEEEEEeC-CCCEEEEEE--CCcEEEEehHHEEEcCCcCccc
Confidence            467899999 66788899999999999999965 457999997  4789999999999887554433

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.53  E-value=1.6e-14  Score=94.93  Aligned_cols=58  Identities=26%  Similarity=0.529  Sum_probs=50.6

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+..++|+++ |...++++|+|++||+|.|++... ..||.|++  +++.|+||++||+++.
T Consensus         5 ~~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A            5 SQLVVRAKFN-FQQTNEDELSFSKGDVIHVTRVEE-GGWWEGTH--NGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CCCEEEESSC-BCCCSTTBCCBCTTCEEEEEECCT-TSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CCEEEEEccc-cCCcCcCcccCCCCCEEEEeEecC-CCEEEEEE--CCCEEEEehHHeEEcC
Confidence            3568999999 667788999999999999999654 57999996  7899999999999874

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=103.15  Aligned_cols=57  Identities=28%  Similarity=0.571  Sum_probs=49.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecC----CCCCceeeecCCCCccceecCCCeee
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~----~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ...++|+|| |...++++|+|++||+|.|++..    .+.+||+|++. +++.|+||+|||+|
T Consensus        29 ~~~~~Alyd-y~a~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~-~g~~G~fP~nyV~p   89 (89)
T 2rf0_A           29 GPVWTAVFD-YEAAGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP-SGRVGVFPSNYVAP   89 (89)
T ss_dssp             CCEEEECSC-BCCSSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECT-TCCEEEEEGGGEEC
T ss_pred             CcEEEECCc-cCCCCCCccccCCCCEEEEEeccCCcccCCCEEEEEEC-CCCEEEEcHHHCcC
Confidence            368999999 66788899999999999999975    25689999974 68999999999986

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=3.6e-14  Score=99.39  Aligned_cols=59  Identities=20%  Similarity=0.312  Sum_probs=49.8

Q ss_pred             CCceEEEecccCCCC--CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          24 TPAVMKATQNCHEID--EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~--e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      .+..++|+|+ |...  ++++|+|++||+|.|++.. +.+||+|+.  ++++|+||+|||+.+..
T Consensus        15 ~~~~~~alyd-y~~~a~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~fP~~yv~~~~~   75 (88)
T 2dbk_A           15 GPVFAKAIQK-RVPCAYDKTALALEVGDIVKVTRMN-INGQWEGEV--NGRKGLFPFTHVKIFDP   75 (88)
T ss_dssp             CCEEEEECSC-BCCCTTCSSBCCBCTTCEEEEEEEC-TTSCEEEEC--SSCEEEECTTTEEECCS
T ss_pred             CCEEEEEccc-ccCCCCCCCcccCCCCCEEEEEEec-CCCEEEEEe--CCCEEEEehHHeEECCC
Confidence            3567899999 6533  7889999999999999976 457999974  68999999999998753

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.52  E-value=5.3e-15  Score=97.14  Aligned_cols=57  Identities=16%  Similarity=0.340  Sum_probs=49.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCC------CccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST------FNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt------g~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+..+++|+|++||+|.|++... ..||+|++.+|      ++.|+||+|||+++
T Consensus         2 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYD-YQEKSPREVTMKKGDILTLLNSTN-KDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEECCS-SSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEccc-CCccCCCCCCCCCCCEEEEEEcCC-CCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            36889999 667788999999999999999654 57999997644      89999999999875

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.8e-14  Score=99.25  Aligned_cols=59  Identities=24%  Similarity=0.320  Sum_probs=50.7

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEec-CCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEG-DPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~-~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...++++|+|++||+|+|++. ..+..||+|++  +++.|+||+|||+++..
T Consensus         8 ~~~~~al~d-y~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~fP~~yv~~~~~   67 (85)
T 2dlp_A            8 SGYVIALRS-YITDNCSLLSFHRGDLIKLLPVATLEPGWQFGSA--GGRSGLFPADIVQPAAA   67 (85)
T ss_dssp             CCEEEESSC-BCCSSSSBCCBCTTCEEEECCCSCCCTTEEEEES--SSCEEEEETTSEEECCC
T ss_pred             CEEEEECCC-CCccCcCCccCcCCCEEEEEEccCCCCCeEEEEE--CCEEEEechHHeEECCC
Confidence            467999999 6678889999999999999985 23468999996  68999999999999863

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=7e-15  Score=103.92  Aligned_cols=59  Identities=19%  Similarity=0.296  Sum_probs=52.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CC--CCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PE--CHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e--~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. .+  ..||+|+|.++++.|+||+|||+++.
T Consensus        17 ~~~~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~   78 (94)
T 2e5k_A           17 ETLQVIYP-YTPQNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKAD   78 (94)
T ss_dssp             EEEEECSC-BCCSSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECC
T ss_pred             eEEEECCc-CCCCCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcc
Confidence            57899999 66788899999999999999874 23  67999998779999999999999975

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.52  E-value=2.6e-15  Score=106.01  Aligned_cols=60  Identities=20%  Similarity=0.252  Sum_probs=50.6

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEec-------------C-CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEG-------------D-PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~-------------~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.             . .+..||.|++.++++.|+||+|||+++.
T Consensus        11 ~~~~~Alyd-y~a~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~   84 (90)
T 3o5z_A           11 GFQYRALYP-FRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLG   84 (90)
T ss_dssp             EEEEEECSC-BCCCSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEE
T ss_pred             CcEEEEeee-ECCCCCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEec
Confidence            467899999 6678889999999999999942             1 1236999999889999999999999875

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.52  E-value=1.9e-14  Score=97.18  Aligned_cols=57  Identities=19%  Similarity=0.417  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |....+++|+|++||+|.|++.  +.+||.|++. +++.|+||+|||+++..
T Consensus         8 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~~P~~yv~~~~~   64 (72)
T 2jw4_A            8 VVVVAKFD-YVAQQEQELDIKKNERLWLLDD--SKSWWRVRNS-MNKTGFVPSNYVERKNS   64 (72)
T ss_dssp             EEEECSSC-CCCSSTTSCCCCTTCEEEEEEC--SSSSEEEECT-TSCEEEECTTSCEECCC
T ss_pred             eEEEECcC-CCcCCCCcccCCCCCEEEEEEC--CCCEEEEEEC-CCCEEEEEhhHEEEcCC
Confidence            57899999 6678889999999999999996  3479999975 78999999999998763

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.9e-14  Score=94.89  Aligned_cols=57  Identities=21%  Similarity=0.398  Sum_probs=50.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|+ |...++++|+|++||+|.|++... ..||+|++  +++.|+||++||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   63 (68)
T 1x2p_A            7 GEEFVAIAD-YAATDETQLSFLRGEKILILRQTT-ADWWWGER--AGCCGYIPANHVGKHS   63 (68)
T ss_dssp             CCEEEESSC-CCCSSTTBCCCCTTCEEEEEECCS-SSEEEEEC--TTCCEEEESSSEECCC
T ss_pred             CCEEEECce-ECCCCcCCcCCCCCCEEEEEEcCC-CCEEEEEE--CCeEEEEehHHeEECC
Confidence            578999999 667788999999999999999764 57999995  6899999999999875

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.52  E-value=3.1e-14  Score=96.73  Aligned_cols=56  Identities=20%  Similarity=0.283  Sum_probs=48.2

Q ss_pred             ceEEEecccCCCC--CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEID--EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~--e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...  ++++|+|++||+|.|++.. +..||+|+.  +++.|+||+|||+.+.
T Consensus        10 ~~~~alyd-y~~~~~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~   67 (73)
T 2ebp_A           10 GRARVHTD-FTPSPYDTDSLKLKKGDIIDIISKP-PMGTWMGLL--NNKVGTFKFIYVDVLS   67 (73)
T ss_dssp             EEEEECSC-BCCCTTCCSBCCBCSSCEEEEEECC-SSSCEEEEC--SSCEEEECSTTEEECC
T ss_pred             eEEEEeec-cCCCCCCCCccCCCCCCEEEEEEeC-CCCeEEEEE--CCCEEEEeHHHEEECC
Confidence            57899999 5544  7799999999999999975 467999985  6899999999999875

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.52  E-value=2.4e-14  Score=97.14  Aligned_cols=58  Identities=19%  Similarity=0.350  Sum_probs=51.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCC-Ccc------ceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNI------GMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt-g~~------G~FP~n~V~p~~   85 (161)
                      ..++|+|| |....+++|+|++||+|.|++.. +..||+|++..+ ++.      |+||+|||+++.
T Consensus         8 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~   72 (77)
T 2d8j_A            8 QYFVALFD-YQARTAEDLSFRAGDKLQVLDTS-HEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDS   72 (77)
T ss_dssp             EEEEESSC-BCCSSSSBCCBCTTCCEEEEECC-SSSEEEEEECSSCCSSCCCCSEEEEETTTEEECC
T ss_pred             CEEEEccC-CCCCCCCccCCCCCCEEEEEECC-CCCeEEEEECCCCCcCcccCCceEECHHHeeEcC
Confidence            57899999 66778899999999999999975 457999999877 898      999999999875

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.52  E-value=9.2e-15  Score=95.72  Aligned_cols=56  Identities=21%  Similarity=0.424  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+++ |...++++|+|++||+|.|++... ..||.|+  .+++.|+||+|||++++
T Consensus         6 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            6 SQVEALFS-YEATQPEDLEFQEGDIILVLSKVN-EEWLEGE--SKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             EEEECCSC-BCCCSSSBCCBCSSCEEEEEEESS-SSCEEEE--CSSCEEEECGGGCCCSC
T ss_pred             eEEEECCC-CCcCCCCCccCCCCCEEEEEEeCC-CCEEEEE--ECCcEEEEeHHHEEECC
Confidence            57899999 667888999999999999999754 5799999  47899999999998864

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=2.8e-14  Score=95.45  Aligned_cols=58  Identities=22%  Similarity=0.343  Sum_probs=50.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++..  .+..||+|+  .+++.|+||++||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~   66 (71)
T 2cre_A            7 GLLARALYD-NCPDCSDELAFSRGDILTILEQHVPESEGWWKCL--LHGRQGLAPANRLQILS   66 (71)
T ss_dssp             CEEEEESSC-CCCSSSSBCCCCSSCCEEEEESCCTTSTTEEEEE--SSSCCEEEETTTEEECC
T ss_pred             cEEEEECcc-cCcCCCCCCCCCCCCEEEEeEcCCCCCCCcEEEE--ECCCEEEEehHHEEECC
Confidence            467899999 66778899999999999999974  146799999  47899999999999875

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.52  E-value=1.1e-14  Score=98.84  Aligned_cols=57  Identities=21%  Similarity=0.458  Sum_probs=47.9

Q ss_pred             ceEEEecccCCCCCCC-CccccCCCEEEEEecCC----CCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEG-KLYIDAGDQIVIIEGDP----ECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-~L~f~~GDiI~Vid~~~----e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+++++ +|+|++||+|+|++...    +.+||+|++. ++++|+||+|||+.+
T Consensus         8 ~~~~aly~-y~a~~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~-~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A            8 HFARALYD-FVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTK-NGNIGYIPYNYIEII   69 (69)
T ss_dssp             -CEEECSC-CCCSSTTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEET-TTEEEEECGGGEEEC
T ss_pred             eEEEEEec-ccCCCCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeC-CCCEEEecHHHEEEC
Confidence            36789999 6577777 99999999999999764    3589999984 689999999999863

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.52  E-value=1.3e-14  Score=96.68  Aligned_cols=58  Identities=16%  Similarity=0.314  Sum_probs=50.0

Q ss_pred             CCceEEEecccCCCC--CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEID--EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~--e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .|..++|+|+ |...  ++++|+|++||+|.|++.. +..||+|..  +++.|+||+|||+++.
T Consensus         5 ~~~~~~alyd-y~~~~~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~   64 (67)
T 2eyx_A            5 GPIYARVIQK-RVPNAYDKTALALEVGELVKVTKIN-VSGQWEGEC--NGKRGHFPFTHVRLLD   64 (67)
T ss_dssp             CSCBEEECCC-BCCCTTCSSBCCBCSSEEEEEEEEC-TTSEEEEEE--TTEEEEEEGGGBCCBC
T ss_pred             CCEEEEEeEE-ECCCCCCCCccccCCCCEEEEEEec-CCCEEEEEE--CCCEEEEehHhEEEcC
Confidence            4678999999 5566  7789999999999999976 457999975  6899999999999864

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=2.2e-14  Score=96.96  Aligned_cols=57  Identities=25%  Similarity=0.435  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... +..||+|+.  +++.|+||++||+++.
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   65 (73)
T 2dm1_A            8 GTAVARYN-FAARDMRELSLREGDVVRIYSRIGGDQGWWKGET--NGRIGWFPSTYVEEEG   65 (73)
T ss_dssp             SEEEESSC-BCCCSTTBCCBCTTCEEECCBSSSSSSSCEEEEE--TTEEEEECSSSEEECC
T ss_pred             CEEEECcc-CCcCCCCcCCCCCCCEEEEEEecCCCCCeEEEEE--CCeEEEeehHHEEEcC
Confidence            57899999 667888999999999999999754 357999995  7899999999999975

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.51  E-value=1e-14  Score=97.31  Aligned_cols=56  Identities=29%  Similarity=0.468  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. +.+||+|+.  +++.|+||+|||+.+.
T Consensus         2 ~~~~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~   57 (65)
T 2fei_A            2 RQCKVLFE-YIPQNEDELELKVGDIIDINEEV-EEGWWSGTL--NNKLGLFPSNFVKELE   57 (65)
T ss_dssp             CEEECSSC-CCCCSTTBCCCCTTCEEECCCCS-SSSEEEEES--SSCEEEEETTTSCBCC
T ss_pred             eEEEECcc-CCcCCcCccCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEecHHHEEEcC
Confidence            46899999 66788899999999999999965 467999984  7999999999999875

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.51  E-value=9.6e-15  Score=95.18  Aligned_cols=54  Identities=17%  Similarity=0.351  Sum_probs=47.9

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      +..++|+|| |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+
T Consensus         6 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~   59 (60)
T 2gnc_A            6 PEFAIAKFD-YVGRSARELSFKKGASLLLYHRAS-EDWWEGRH--NGIDGLVPHQYIV   59 (60)
T ss_dssp             CEEEEESSC-BCCSSTTBCCBCTTCEEEEEEEEE-TTEEEEEE--TTEEEEEEGGGEE
T ss_pred             CEEEEECCC-CCcCCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCeEEEEeHhhEE
Confidence            578899999 667788999999999999999754 47999997  6899999999996

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=2.7e-14  Score=95.56  Aligned_cols=58  Identities=17%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|.|++...+..||+|++. +++.|+||+|||+.+.
T Consensus         8 ~~~~alyd-y~~~~~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~-~g~~G~~P~~yv~~~~   65 (70)
T 2ct4_A            8 GHCVAIYH-FEGSSEGTISMAEGEDLSLMEEDKGDGWTRVRRK-EGGEGYVPTSYLRVTS   65 (70)
T ss_dssp             CEEEESSC-BCCCSTTCCCBCTTCEEEEEECCSSSCEEEEECS-SSCEEEEEGGGEEECC
T ss_pred             CEEEEccc-CCCCCCCcCCCCCCCEEEEEeccCCCCeEEEEeC-CCCEEEEEhHHeEEcC
Confidence            56899999 6678889999999999999997654569999986 7999999999999875

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.51  E-value=9.2e-15  Score=100.33  Aligned_cols=58  Identities=29%  Similarity=0.556  Sum_probs=50.9

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|| |...++++|+|++||+|.|++... +..||+|++  +++.|+||+|||+++.
T Consensus        17 ~~~~~al~d-y~~~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   75 (80)
T 2d8h_A           17 PIEVTALYS-FEGQQPGDLNFQAGDRITVISKTDSHFDWWEGKL--RGQTGIFPANYVTMNS   75 (80)
T ss_dssp             CEEEECSSC-EECSSTTBCEECTTCEEEEEECCSCSSSEEEEEE--TTEEEEEEGGGCCBCC
T ss_pred             CEEEEECcc-CCcCCCCeeeEcCCCEEEEeECcCCCCCeEEEEE--CCEEEEEchhHeEEcC
Confidence            467899999 667888999999999999999764 468999997  6899999999999875

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.51  E-value=3.2e-14  Score=94.66  Aligned_cols=57  Identities=23%  Similarity=0.356  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||+|+.  +++.|+||++||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   63 (68)
T 2djq_A            7 GPRAKALCN-YRGKNPGDLKFNKGDVILLRRQLD-ENWYQGEI--NGVSGIFPASSVEVIS   63 (68)
T ss_dssp             CCEEEECSC-CCSCCTTCCCCCTTCEEEEEECCC-SSEEEEEE--TTEEEEEESSSEETTC
T ss_pred             ceEEEECCC-CCCCCcCCccCCCCCEEEEEEecC-CCEEEEEE--CCcEEEeehHHEEEcC
Confidence            467899999 667888999999999999999754 57999994  7899999999999875

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.51  E-value=9.3e-15  Score=98.73  Aligned_cols=57  Identities=19%  Similarity=0.302  Sum_probs=50.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++...+..||+|+.  +++.|+||+|||+++.
T Consensus        11 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   67 (72)
T 1ugv_A           11 RKAKALYA-CKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTL--NGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSC-BCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEES--SSCEEEEEGGGEEECC
T ss_pred             cEEEEccc-cCCcCCCEeCCcCCCEEEEEEecCCCCeEEEEE--CCcEEEecHHHEEECC
Confidence            57899999 667888999999999999998655678999994  7899999999999875

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.51  E-value=1.4e-14  Score=94.31  Aligned_cols=56  Identities=27%  Similarity=0.503  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |.+..+++|+|++||+|.|++.  +.+||.|++. +++.|+||+|||+++.
T Consensus         2 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~-~g~~G~~P~~yv~~~~   57 (60)
T 1i07_A            2 KYAKSKYD-FVARNSSELSVMKDDVLEILDD--RRQWWKVRNA-SGDSGFVPNNILDIMR   57 (60)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEECGG--GCCEEEEECT-TSCEEEEEGGGEEEEC
T ss_pred             eEEEECcc-CCCCCCCcccCCCCCEEEEEEc--CCCeEEEEEC-CCCEEEEEHHHeEEcc
Confidence            36889999 6678889999999999999997  5679999975 5899999999999875

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.51  E-value=2.1e-14  Score=96.06  Aligned_cols=58  Identities=26%  Similarity=0.510  Sum_probs=50.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.. .+..||+|++  +++.|+||++||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~~~   65 (70)
T 2da9_A            7 GDYCKVIFP-YEAQNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLS   65 (70)
T ss_dssp             SEEEEECSC-CCCSSTTBCCCCTTEEEEEEECCCSSTTEEEEEC--SSCEEEEEGGGEEECC
T ss_pred             CcEEEECcC-CCCCCcCEeeEcCCCEEEEEECCCCCCCeEEEEE--CCcEEEechHHeEECC
Confidence            357899999 66788899999999999999974 3568999995  7899999999999875

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.51  E-value=3e-14  Score=96.21  Aligned_cols=58  Identities=24%  Similarity=0.421  Sum_probs=50.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. +..||+|++  +++.|+||++||+.+...
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~   65 (73)
T 2dbm_A            8 PCCRALYD-FEPENEGELGFKEGDIITLTNQI-DENWYEGML--HGHSGFFPINYVEILVAL   65 (73)
T ss_dssp             CEEEESSC-BCCCSTTCCCBCTTCEEECCBCS-SSSEEEEEE--TTEEEEEESSSEEESSCC
T ss_pred             CEEEEccc-cCCCCCCCccCCCCCEEEEEEec-CCCEEEEEE--CCCEEEechHHEEEccCC
Confidence            67899999 66788899999999999999965 457999996  789999999999987643

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.50  E-value=3e-14  Score=95.21  Aligned_cols=56  Identities=18%  Similarity=0.433  Sum_probs=49.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++..  .+||+|++ .+++.|+||+|||+++.
T Consensus         9 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~   64 (68)
T 2k2m_A            9 KWVLCNYD-FQARNSSELSVKQRDVLEVLDDS--RKWWKVRD-PAGQEGYVPYNILTPYP   64 (68)
T ss_dssp             CEEEESSC-BCCCSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCCEEEEGGGEEECC
T ss_pred             EEEEECcc-CCCCCCCcccCCCCCEEEEEEcC--CCeEEEEe-CCCCEEEEEhhhEEEcC
Confidence            67899999 66788899999999999999975  57999997 47899999999999875

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=2.8e-14  Score=95.23  Aligned_cols=56  Identities=13%  Similarity=0.262  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|.  .+++.|+||+|||+++.
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~   63 (68)
T 2dmo_A            8 EAHRVLFG-FVPETKEELQVMPGNIVFVLKKGN-DNWATVM--FNGQKGLVPCNYLEPVS   63 (68)
T ss_dssp             EEEEECSS-CCCCSSSSCCCCTTCEEEECEECS-SSCEEEE--ETTEEEEECSTTEEECC
T ss_pred             CEEEECcC-CCcCCcCCCCCCCCCEEEEEEeCC-CCEEEEE--eCCCEEEeehHHeEECC
Confidence            57899999 667888999999999999999765 5799997  47899999999999875

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.50  E-value=4.1e-14  Score=96.64  Aligned_cols=58  Identities=24%  Similarity=0.342  Sum_probs=50.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||.|+.  +++.|+||+|||+++..
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~~   64 (78)
T 2yuo_A            7 GRRAKALLD-FERHDDDELGFRKNDIITIISQKD-EHCWVGEL--NGLRGWFPAKFVEVLDE   64 (78)
T ss_dssp             CEEEEESSC-BCCSSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEECC
T ss_pred             ceEEEECcc-CCCCCCCCccCCCCCEEEEEEecC-CCEEEEEE--CCCEEEEehHHEEECCC
Confidence            467899999 667788999999999999999654 57999995  68999999999998763

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.50  E-value=4.8e-15  Score=102.58  Aligned_cols=59  Identities=22%  Similarity=0.360  Sum_probs=50.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEec-------------C-CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEG-------------D-PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~-------------~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|+++             . .+..||+|++.++++.|+||+|||+.+.
T Consensus         6 ~~~~Alyd-y~~~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A            6 YQYRALYD-YKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             EEEEECSC-BCCCSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             cEEEEccc-cCCCCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECC
Confidence            47889999 6678889999999999999953             1 1236999999888999999999999865

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.50  E-value=2.5e-14  Score=98.49  Aligned_cols=58  Identities=12%  Similarity=0.225  Sum_probs=50.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... +..||+|+  .+++.|+||+|||+.+..
T Consensus        18 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~   76 (81)
T 1x43_A           18 RKARVLYD-YDAANSTELSLLADEVITVFSVVGMDSDWLMGE--RGNQKGKVPITYLELLNS   76 (81)
T ss_dssp             EEEEESSC-CCCSSTTBCCCCTTCEEEEECCTTCCTTEEEEE--ETTEEEEEEGGGEEECCC
T ss_pred             eEEEEccc-CCCCCCCcCCCCCCCEEEEEEcCCCCCCcEEEE--ECCCEEEEehHHEEECCC
Confidence            67899999 667888999999999999999753 56899998  479999999999998863

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.50  E-value=5e-14  Score=93.59  Aligned_cols=56  Identities=20%  Similarity=0.454  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. +..||+|+  .+++.|+||++||+++.
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~--~~g~~G~~P~~yv~~~~   63 (68)
T 2dl3_A            8 RPARAKFD-FKAQTLKELPLQKGDIVYIYKQI-DQNWYEGE--HHGRVGIFPRTYIELLS   63 (68)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEECC-STTEEEEE--CSSCEEEEETTTEEECC
T ss_pred             cEEEECcc-CCCCCcCCccCCCCCEEEEeEec-CCCEEEEE--ECCCEEEEchHHEEECC
Confidence            57899999 66778899999999999999965 45799999  47899999999999875

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.50  E-value=2.9e-14  Score=96.36  Aligned_cols=57  Identities=23%  Similarity=0.387  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |...++++|+|++||+|.|++... ..||.|++  +++.|+||+|||+.+.
T Consensus        13 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~~~   69 (73)
T 3c0c_A           13 QPSCKALYD-FEPENDGELGFREGDLITLTNQID-ENWYEGML--HGQSGFFPLSYVQVLV   69 (73)
T ss_dssp             SCEEEESSC-BCCSSTTBCCBCTTCEEEEEEECS-SSEEEEEE--TTEEEEEEGGGEEEEE
T ss_pred             CeEEEECcc-CCCCCCCCccCcCCCEEEEEEecC-CCEEEEEE--CCCEEEeChHHEEECC
Confidence            478999999 667888999999999999999764 57999996  7899999999999875

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=7.4e-14  Score=96.17  Aligned_cols=57  Identities=12%  Similarity=0.200  Sum_probs=50.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  .++.|+||+|||+++..
T Consensus         9 ~~~~al~d-y~~~~~~eLs~~~Gd~i~vl~~~~-~gWw~g~~--~g~~G~~P~~yv~~~~~   65 (80)
T 2ekh_A            9 TSYMTCSA-YQKVQDSEISFPAGVEVQVLEKQE-SGWWYVRF--GELEGWAPSHYLVLDEN   65 (80)
T ss_dssp             EEEEECSC-BCCSSTTSCCBCTTCEEEEEEECT-TSEEEEEE--TTEEEEEETTTEECCCC
T ss_pred             CEEEECCC-CCCCCCCccCcCCCCEEEEEEeCC-CCeEEEEE--CCCEEEEEhHHeEECCC
Confidence            57899999 667888999999999999999765 57999996  48999999999998764

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.49  E-value=2.1e-14  Score=96.28  Aligned_cols=58  Identities=17%  Similarity=0.342  Sum_probs=48.7

Q ss_pred             CCceEEEecccCCCCCC--CCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHEIDEE--GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~--~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .|..++|+|+ |....+  ++|+|++||+|.|++.  +.+||.|++. +++.|+||+|||+++.
T Consensus         4 ~~~~~~alyd-y~~~~~~~~eLsf~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~~P~~yv~~~~   63 (70)
T 2vkn_A            4 FIYKAKALYP-YDADDDDAYEISFEQNEILQVSDI--EGRWWKARRA-NGETGIIPSNYVQLID   63 (70)
T ss_dssp             CEEEEEESSC-BCCCSSSTTBCCBCTTCEEEEECT--TSSEEEEECT-TSCEEEEEGGGEEEEE
T ss_pred             cCEEEEECcc-CCCCCCCCCcccCCCCCEEEEEEc--CCCeEEEEEC-CCCEEEEehHHEEECC
Confidence            4678999999 555543  4999999999999985  4579999975 8999999999999864

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.49  E-value=1.8e-14  Score=96.57  Aligned_cols=56  Identities=25%  Similarity=0.479  Sum_probs=49.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.  +..||+|+.  +++.|+||+|||+++.
T Consensus         8 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~--~g~~G~~P~~yv~~~~   63 (69)
T 1uhf_A            8 GEEYIALYP-YSSVEPGDLTFTEGEEILVTQK--DGEWWTGSI--GDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             SEEEECSSC-BCCSSSSBCCBCTTCEEEECEE--ETTEEEECS--TTCCEEECGGGCEECC
T ss_pred             CCEEEEeee-ECCCCcCccCCCCCCEEEEEEe--CCCEEEEEe--CCcEEEEchHHeEECC
Confidence            467899999 6677889999999999999997  457999984  6899999999999875

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.49  E-value=2.5e-14  Score=95.31  Aligned_cols=57  Identities=25%  Similarity=0.384  Sum_probs=49.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++... .+||+|++ .+++.|+||+|||++..
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~-~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            7 PTVVALYD-YTANRSDELTIHRGDIIRVFFKDN-EDWWYGSI-GKGQEGYFPANHVASET   63 (69)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEEECS-SSEEEEEE-ETTEEEEEEGGGEEEHH
T ss_pred             CEEEECcc-CCCCCcCcCCCCCCCEEEEEEecC-CCeEEEEe-CCCCEEEEchHHeEECc
Confidence            57899999 667788999999999999999764 57999997 47899999999999853

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=2.5e-14  Score=97.58  Aligned_cols=58  Identities=22%  Similarity=0.291  Sum_probs=49.7

Q ss_pred             CceEEEecccCCCCC-------CCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDE-------EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e-------~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...+       +++|+|++||+|+|++...+..||.|++  +++.|+||+|||+++.
T Consensus         7 ~~~~~Al~d-y~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~--~g~~G~~P~~yv~~~~   71 (76)
T 2csi_A            7 GRRMVALYD-YDPRESSPNVDVEAELTFCTGDIITVFGEIDEDGFYYGEL--NGQKGLVPSNFLEEVS   71 (76)
T ss_dssp             SEEEECSSC-CCTTTTSCSSSTTTSCCCCTTCEEEEESSCCSSSEEEEEE--TTEEEEEEGGGCCBCC
T ss_pred             ccEEEEccc-CCCCCcccCCCCCCcccCCCCCEEEEeEecCCCCeEEEEE--CCcEEEEehHHEEECC
Confidence            467899999 65666       7899999999999999765446999996  6899999999999875

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.49  E-value=1.2e-13  Score=99.51  Aligned_cols=58  Identities=24%  Similarity=0.493  Sum_probs=51.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. +.+||+|++..+++.|+||+|||+++.
T Consensus        28 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~   85 (109)
T 2yt6_A           28 TIFVALYD-YEARTTEDLSFKKGERFQIINNT-EGDWWEARSIATGKSGYIPSNYVVPAD   85 (109)
T ss_dssp             CEEEESSC-CCCSSTTSCCCCTTCEEEEEECS-CTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred             EEEEECcc-CCCCCCCccCCCCCCEEEEEEcc-CCCcEEEEECCCCCEEEechHHcEECC
Confidence            67899999 66778899999999999999976 467999998678999999999999975

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.49  E-value=1.4e-14  Score=96.12  Aligned_cols=58  Identities=19%  Similarity=0.333  Sum_probs=50.1

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |....+++|+|++||+|.|++... ..||+|++. +++.|+||++||+++.
T Consensus         8 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A            8 LKKVVALYD-YMPMNANDLQLRKGDEYFILEESN-LPWWRARDK-NGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCEEEBSSC-CCCSSSSSCCCCSSCEEECCCCCS-SSEECCBCT-TSCBCCEETTTBCCSC
T ss_pred             CeEEEECcc-CCCCCCCCccCCCCCEEEEEEccC-CCcEEEEEC-CCCEEEEchHhEEEcC
Confidence            367899999 667788999999999999999754 579999974 7999999999999764

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.49  E-value=3.2e-14  Score=93.21  Aligned_cols=56  Identities=25%  Similarity=0.616  Sum_probs=48.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.. +..||+|++.  ++.|+||++||++.
T Consensus         5 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~--g~~G~~P~~yv~~~   60 (62)
T 1uj0_A            5 ARRVRALYD-FEAVEDNELTFKHGELITVLDDS-DANWWQGENH--RGTGLFPSNFVTTD   60 (62)
T ss_dssp             CEEEEESSC-BCCCSTTBCCBCTTCEEEEEECC-SSSEEEEEET--TEEEEEEGGGEESC
T ss_pred             CeEEEECcc-CCCCCcCCcCCCCCCEEEEEEeC-CCCEEEEEEC--CCEEEechhHEEEe
Confidence            467899999 66778899999999999999965 4689999974  78999999999873

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=4.8e-14  Score=96.58  Aligned_cols=57  Identities=23%  Similarity=0.404  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||+|+  .+++.|+||+|||+.+.
T Consensus        17 ~~~~~al~d-y~~~~~~eLsf~~Gd~i~v~~~~~-~gWw~g~--~~g~~G~~P~~yv~~~~   73 (78)
T 2ed0_A           17 LEKVVAIYD-YTKDKEDELSFQEGAIIYVIKKND-DGWYEGV--MNGVTGLFPGNYVESIS   73 (78)
T ss_dssp             SEEEEECSC-BCCSSTTBCCBCSSCEEEEEEECS-SSEEEEE--ETTEEEEEETTSEEECS
T ss_pred             CEEEEECcc-CCccCcCcccccCCCEEEEEEeCC-CCEEEEE--ECCcEEEeChHHEEEcC
Confidence            357899999 667888999999999999999764 5799999  47999999999999875

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.49  E-value=2.5e-14  Score=95.46  Aligned_cols=57  Identities=21%  Similarity=0.361  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC--CCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP--ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~--e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |....+++|+|++||+|.|++...  +.+||+|+.  +++.|+||+|||+.+.
T Consensus         4 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   62 (69)
T 1wyx_A            4 VLAKALYD-NVAESPDELSFRKGDIMTVLEQDTQGLDGWWLCSL--HGRQGIVPGNRLKILV   62 (69)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEETTGGGCTTEEEEEE--TTEEEEEEGGGEEEEE
T ss_pred             EEEEECcc-CCcCCCCccCCcCCCEEEEeECCCCCCCCcEEEEE--CCcEEEechhhEEECC
Confidence            36889999 667888999999999999999762  467999994  7899999999999764

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=9.5e-14  Score=95.01  Aligned_cols=57  Identities=23%  Similarity=0.468  Sum_probs=49.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|+.  +++.|+||++||+.+..
T Consensus         8 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~~   64 (79)
T 2yun_A            8 RLCKALYS-FQARQDDELNLEKGDIVIIHEKKE-EGWWFGSL--NGKKGHFPAAYVEELPS   64 (79)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEECCS-SSCEEEES--SSCEEEECSTTEEEESS
T ss_pred             CEEEECcc-CCcCCCCCcCCCCCCEEEEEEcCC-CCEEEEEE--CCCEEEEEhHHeEECCC
Confidence            57899999 667888999999999999999654 57999994  78999999999998764

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.49  E-value=3.9e-14  Score=95.48  Aligned_cols=57  Identities=26%  Similarity=0.524  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |.+..+++|+|++||+|.|++.. .+..||.|++  +++.|+||+|||+.+.
T Consensus        10 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~~~   67 (73)
T 2k9g_A           10 DYCKVIFP-YEAQNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLP   67 (73)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEECCSSSTTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             cEEEECcc-CCCCCCCeeeECCCCEEEEEECCCCCCCEEEEEE--CCeEEEEchHHEEECC
Confidence            57899999 66788899999999999999975 3568999995  7899999999999875

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=4.1e-14  Score=96.38  Aligned_cols=58  Identities=22%  Similarity=0.314  Sum_probs=49.9

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCC--CccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST--FNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt--g~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |... +++|+|++||+|.|++.. +..||+|++..+  ++.|+||+|||+++.
T Consensus        10 ~~~~~alyd-y~~~-~~eLs~~~Gd~i~vl~~~-~~gWw~g~~~~~~~g~~G~~P~~yv~~~~   69 (75)
T 2egc_A           10 KDVYVSIAD-YEGD-EETAGFQEGVSMEVLERN-PNGWWYCQILDGVKPFKGWVPSNYLEKKN   69 (75)
T ss_dssp             CEEEEECSC-BCCC-SSSCCBCTTCEEEECEEC-TTSEEEEEECCSSSCEEEEEEGGGEEECC
T ss_pred             CeEEEECCC-cCCC-CCcCCCCCCCEEEEEEcC-CCCeEEEEeCCCCCCcEEEEehHHCEECC
Confidence            467899999 6666 889999999999999976 457999998754  589999999999875

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.48  E-value=4.3e-14  Score=94.33  Aligned_cols=56  Identities=18%  Similarity=0.367  Sum_probs=49.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|.|++..  ..||+|++ .+++.|+||+|||+++.
T Consensus         8 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~   63 (68)
T 1wxb_A            8 KYVKILYD-FTARNANELSVLKDEVLEVLEDG--RQWWKLRS-RSGQAGYVPCNILGEAS   63 (68)
T ss_dssp             CCEECSSC-BCCSSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCEEEEETTTCCBCC
T ss_pred             EEEEECcc-CCCCCCCccCCCCCCEEEEEEcC--CCEEEEEE-CCCCEEEEEHHHeEECC
Confidence            56899999 66788899999999999999974  57999997 47899999999999875

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.48  E-value=5.5e-14  Score=96.36  Aligned_cols=57  Identities=19%  Similarity=0.356  Sum_probs=49.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC---CCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP---ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~---e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|.|++...   +..||+|+  .+++.|+||+|||+++.
T Consensus        14 ~~~~Alyd-y~~~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~   73 (79)
T 1uhc_A           14 QVYFAVYT-FKARNPNELSVSANQKLKILEFKDVTGNTEWWLAE--VNGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             CCEEESSC-BCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEE--SSSCEEEEEGGGEEECC
T ss_pred             eEEEECcc-CCCCCCCccCCCCCCEEEEEECCCCCCCCCeEEEE--eCCCEEEEchHHeEECC
Confidence            57899999 667888999999999999999764   35799998  47899999999999875

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.48  E-value=3.3e-14  Score=94.51  Aligned_cols=57  Identities=25%  Similarity=0.551  Sum_probs=49.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|.|++... ..||.|++. +++.|+||++||+++.
T Consensus        11 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           11 EEYIAVGD-FTAQQVGDLTFKKGEILLVIEKKP-DGWWIAKDA-KGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             EEEEECSC-BCCSSSSCCCBCSSEEEEECSCCS-SSEEEEECS-SSCEEEEESTTEEECC
T ss_pred             CEEEEccc-CCCCCCCcCCCCCCCEEEEEEcCC-CCeEEEEEC-CCCEEEEehHHeEECc
Confidence            57889999 667788999999999999999754 579999974 7899999999999863

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.48  E-value=1.5e-14  Score=100.46  Aligned_cols=58  Identities=19%  Similarity=0.294  Sum_probs=50.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++... .+||.|++  +++.|+||+|||+++...
T Consensus        19 ~~~~Alyd-y~a~~~~eLsf~~Gd~I~Vl~~~~-~gWw~g~~--~g~~G~fP~nyV~~~~~~   76 (79)
T 1z9q_A           19 PRAEALFD-FTGNSKLELNFKAGDVIFLLSRIN-KDWLEGTV--RGATGIFPLSFVKILKDF   76 (79)
T ss_dssp             CCEEESSC-CCCSSTTBCCCCTTCCBCCCEESS-SSEEEEEE--TTEEEEEEGGGEEESSCC
T ss_pred             eEEEEcCc-cCCCCCCcccccCCCEEEEeEecC-CCEEEEEE--CCeEEEecHHHEEECCCC
Confidence            67899999 667888999999999999999754 57999996  689999999999998643

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.48  E-value=3.8e-14  Score=96.65  Aligned_cols=56  Identities=18%  Similarity=0.309  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++.
T Consensus        11 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   66 (76)
T 2epd_A           11 VEAVACFA-YTGRTAQELSFRRGDVLRLHERAS-SDWWRGEH--NGMRGLIPHKYITLPA   66 (76)
T ss_dssp             EEEEESSC-EECSSTTBCEECTTCEEEEEEEEE-TTEEEEEE--TTEEEEEESSSEECCS
T ss_pred             EEEEECcC-CCCCCCCccCCCCCCEEEEEEeCC-CCEEEEEE--CCcEEEEehHHEEEcC
Confidence            57899999 667788999999999999999754 57999997  7899999999999875

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=3.1e-14  Score=97.16  Aligned_cols=55  Identities=29%  Similarity=0.695  Sum_probs=47.7

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ...++|+|| |...++++|+|++||+|.|++.. +.+||+|++  .++.|+||+|||++
T Consensus        17 ~~~~~Alyd-y~a~~~~eLsf~~Gd~i~Vl~~~-~~gWw~g~~--~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           17 ARKVRAIYD-FEAAEDNELTFKAGEIITVLDDS-DPNWWKGET--HQGIGLFPSNFVTA   71 (72)
T ss_dssp             CEEEEESSC-BCCSSTTBCCBCTTCEEEEEEEE-ETTEEEEEC--SSCEEECTTCCEEE
T ss_pred             CeEEEECCc-cCCCCCCccCCCCCCEEEEEEec-CCCEEEEEE--CCCEEEechhhCcc
Confidence            367899999 66788899999999999999965 357999996  47899999999986

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.48  E-value=5.2e-14  Score=91.53  Aligned_cols=56  Identities=14%  Similarity=0.349  Sum_probs=49.1

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+++ |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++
T Consensus         6 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~--~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            6 KELVLVLYD-YQEKSPRELTVKKGDILTLLNSTN-KDWWKIEV--NGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CCEEEECSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CEEEEECcC-CCCCCCCCccCCCCCEEEEeEecC-CCeEEEEE--CCEEEEEEHHHEEEC
Confidence            467899999 667788999999999999999764 57999996  689999999999875

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.48  E-value=1.6e-14  Score=105.97  Aligned_cols=60  Identities=18%  Similarity=0.274  Sum_probs=50.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCC------CccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLST------FNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rt------g~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |.+.++++|+|++||+|.|+++.  .+.+||+|+...+      |++|+||+|||+++..
T Consensus        23 ~~~~Alyd-y~a~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~~   90 (108)
T 1i1j_A           23 SMAVALQD-YMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQT   90 (108)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEE
T ss_pred             eEEEECCc-cCCCCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEccc
Confidence            56899999 66888899999999999999973  2235999997644      8999999999998653

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.48  E-value=4.4e-14  Score=97.88  Aligned_cols=58  Identities=28%  Similarity=0.514  Sum_probs=51.6

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      -..++|+|| |....+++|+|++||+|.|++.. + +||+|++.++++.|+||++||+++.
T Consensus        25 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~-~Ww~g~~~~~g~~G~~P~~yv~~~~   82 (86)
T 2oi3_A           25 DIIVVALYD-YEAIHHEDLSFQKGDQMVVLEES-G-EWWKARSLATRKEGYIPSNYVARVD   82 (86)
T ss_dssp             SEEEEESSC-CCCSSSSCCCCCTTCEEEEEEES-S-SEEEEEETTTCCEEEEEGGGEEEGG
T ss_pred             CcEEEECcc-CCCCCCCcCcCCCCCEEEEEEcC-C-CeEEEEECCCCCEEEEehHHcEEcc
Confidence            367899999 66778899999999999999977 4 7999998778999999999999874

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.48  E-value=3.8e-14  Score=94.57  Aligned_cols=57  Identities=19%  Similarity=0.381  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++.. +..||+|++  .++.|+||++||+++.
T Consensus         8 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~   64 (69)
T 2dil_A            8 AQEYRALYD-YTAQNPDELDLSAGDILEVILEG-EDGWWTVER--NGQRGFVPGSYLEKLS   64 (69)
T ss_dssp             CCEEECCSC-BCCSSSSSCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGCCBCC
T ss_pred             CcEEEECcc-CCccCcCccCCCCCCEEEEEECC-CCCEEEEEE--CCCEEEEehHHeEEcC
Confidence            467899999 66788899999999999999974 457999997  4899999999999875

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.48  E-value=6e-14  Score=98.41  Aligned_cols=59  Identities=22%  Similarity=0.451  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. .+.+||+|++. +++.|+||++||+++..
T Consensus        18 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~~   77 (91)
T 1wx6_A           18 HVVQTLYP-FSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLSD   77 (91)
T ss_dssp             EEEEESSC-CCCSSSSBCCCCTTCEEEEEECCSSCTTEEEEECT-TCCEEEEEGGGEEEEEE
T ss_pred             EEEEEeec-CCcCCCCcccCCCCCEEEEEECCCCCCCcEEEEeC-CCCEEEEchHHEEECCC
Confidence            57899999 66788899999999999999973 35689999974 68999999999998753

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.48  E-value=7.7e-14  Score=99.36  Aligned_cols=60  Identities=18%  Similarity=0.224  Sum_probs=49.5

Q ss_pred             CceEEEecccCCCCC------CCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDE------EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e------~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|| |...+      +++|+|++||+|.|+....+.+||+|++ .+++.|+||+|||+++..
T Consensus        17 ~~~~~Alyd-y~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~-~~g~~G~~Psnyv~~~~~   82 (96)
T 1wie_A           17 VHLCVARYS-YNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGEL-LDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             EEEEEESSC-CCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEE-TTCCBCBCCTTSEECCCS
T ss_pred             CcEEEECCc-cCCCcccCCCCCCeeeECCCCEEEEeEecCCCCEEEEEE-CCCCEEEEchHHEEEcCC
Confidence            367899999 55656      7899999999999993334568999996 368999999999998753

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=4.2e-14  Score=100.76  Aligned_cols=59  Identities=15%  Similarity=0.313  Sum_probs=49.8

Q ss_pred             CceEEEecccCCCC--------CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEID--------EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~--------e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...        .+++|+|++||+|.|++...+..||+|++  ++++|+||+|||+++..
T Consensus        17 ~~~~~Alyd-y~~~~~~~~~~~~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~--~g~~G~~P~~yv~~~~~   83 (97)
T 2csq_A           17 ARIFVALFD-YDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGET--CARLGLIPCNMVSEIQA   83 (97)
T ss_dssp             CEEEECSSC-BCTTTTSSCHHHHTTBCCBCTTCEEEEEEEECTTCEEEEEE--TTEEEEEETTTSEECCC
T ss_pred             ceEEEEccc-cCCCcccccCCCCCCccCCCCCCEEEEEEecCCCCeEEEEE--CCcEEEEehHHeEECCC
Confidence            356899999 5565        57899999999999997655556999997  68999999999999863

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.47  E-value=1e-13  Score=93.86  Aligned_cols=56  Identities=20%  Similarity=0.388  Sum_probs=49.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++..  .+||+|++  .++.|+||++||+.+.
T Consensus        10 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~--~g~~G~~P~~yv~~~~   65 (74)
T 1j3t_A           10 NLKAQALCS-WTAKKDNHLNFSKHDIITVLEQQ--ENWWFGEV--HGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             CCEEEESSC-BCCCSTTBCCBCTTCEEEEEEEC--SSEEEEES--TTCCCEEEGGGEEECC
T ss_pred             CeEEEECCC-CCCCCCCccCCCCCCEEEEEecC--CCEEEEEE--CCcEEEEchHHeEECC
Confidence            467899999 66778899999999999999974  47999996  5899999999999875

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.47  E-value=4.1e-14  Score=90.87  Aligned_cols=54  Identities=22%  Similarity=0.367  Sum_probs=47.3

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|+|+ |...++++|+|++||+|.|++... ..||+|.  .+++.|+||+|||++.
T Consensus         3 ~a~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~--~~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            3 PAFVXFA-YVAEREDELSLVXGSRVTVMEXCS-DGWWRGS--YNGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEECSC-BCCCSTTBCCBCTTCEEEEEEECT-TSEEEEE--ETTEEEEEEGGGEEEC
T ss_pred             EEEECcc-CCCCCCCEeeEeCCCEEEEeEcCC-CCEEEEE--ECCcEEEEehHHEEEC
Confidence            5789999 667888999999999999999764 5799995  4789999999999975

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.47  E-value=7.6e-14  Score=93.76  Aligned_cols=57  Identities=14%  Similarity=0.342  Sum_probs=50.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++.
T Consensus         5 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   61 (73)
T 3thk_A            5 KELVLALYD-YQEKSPREVTMKKGDILTLLNSTN-KDWWKVEV--NDRQGFVPAAYVKKLD   61 (73)
T ss_dssp             CCEEEECSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CEEEEECcC-CCcCCCCccCCCCCCEEEEEECCC-CCeEEEEE--CCcEEEEehHHeEECC
Confidence            578999999 667888999999999999999764 57999995  6899999999999875

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.47  E-value=6.8e-14  Score=91.26  Aligned_cols=56  Identities=23%  Similarity=0.388  Sum_probs=47.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccc-eecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIG-MFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G-~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  +++.| +||+|||++++
T Consensus         4 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            4 SAVKALFD-YKAQREDELTFTKSAIIQNVEKQD-GGWWRGDY--GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEEGGGEEECC
T ss_pred             CEEEECcC-CCcCCCCCcCCcCCCEEEEEEecC-CCEEEEEE--CCeEEEEEChHHcEECC
Confidence            56899999 667888999999999999999754 57999997  45665 99999999874

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.46  E-value=4.5e-14  Score=100.49  Aligned_cols=59  Identities=20%  Similarity=0.396  Sum_probs=51.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ...++|+|+ |.+.++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++...
T Consensus        18 ~~~~~Alyd-y~a~~~~eLsf~~Gd~i~V~~~~~-~gWw~g~~--~g~~G~fPsnyV~~~~~~   76 (92)
T 2o2o_A           18 RRRCQVAFS-YLPQNDDELELKVGDIIEVVGEVE-EGWWEGVL--NGKTGMFPSNFIKELSGE   76 (92)
T ss_dssp             SCEEEECSC-BCCCSSSCCCBCSSCEEECCCGGG-SSCBCCEE--TTEECCBCSSSEECCSSC
T ss_pred             CeEEEEccc-cCCCCCccccccCCCEEEEeEecC-CCEEEEEE--CCeEEEeehHHEEECCCC
Confidence            468999999 667888999999999999998654 57999996  799999999999998643

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=9.9e-14  Score=97.23  Aligned_cols=56  Identities=21%  Similarity=0.427  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  +++.|+||+|||+++.
T Consensus        18 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~gWw~g~~--~g~~G~~P~~yv~~~~   73 (88)
T 2cub_A           18 MPAYVKFN-YMAEREDELSLIKGTKVIVMEKCS-DGWWRGSY--NGQVGWFPSNYVTEEG   73 (88)
T ss_dssp             EEEEESSC-CCCCSTTBCCCCTTEEEEEEEECT-TSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CEEEEccc-cCCCCCCCcCCCCCCEEEEEEccC-CCeEEEEE--CCcEEEEehHHEEECC
Confidence            57899999 667888999999999999999764 57999997  7899999999999875

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.46  E-value=7.2e-14  Score=91.77  Aligned_cols=55  Identities=24%  Similarity=0.373  Sum_probs=48.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|+.  +++.|+||+|||+.+
T Consensus        10 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B           10 ITAIALYD-YQAAGDDEISFDPDDIITNIEMID-DGWWRGVC--KGRYGLFPANYVELR   64 (65)
T ss_dssp             SCEEECSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             eEEEEEee-ECCCCcCEeeEecCCEEEEEEecC-CCEEEEEE--CCcEEEEehHHeEEC
Confidence            57899999 667788999999999999999764 57999994  789999999999864

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.46  E-value=7e-14  Score=97.86  Aligned_cols=57  Identities=26%  Similarity=0.473  Sum_probs=50.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++..  .+||.|++..+++.|+||+|||+++.
T Consensus         4 ~~~~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~   60 (90)
T 3reb_B            4 IIVVALYD-YVSWSPDDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVD   60 (90)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEECS--SSEEEEEETTTCCEEEEEGGGEEEEC
T ss_pred             EEEEECCc-cCcCCcCcCCCCCCCEEEEEEeC--CCEEEEEECCCCCEEEEehhheEECC
Confidence            46899999 66788899999999999999974  46999998778999999999999875

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.46  E-value=3.8e-14  Score=94.60  Aligned_cols=58  Identities=24%  Similarity=0.387  Sum_probs=49.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||+|++. +++.|+||+|||+++.
T Consensus         7 ~~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~~~~G~~P~~yv~~~~   64 (69)
T 2eqi_A            7 GRTVKALYD-YKAKRSDELTFCRGALIHNVSKEP-GGWWKGDYG-TRIQQYFPSNYVEDIS   64 (69)
T ss_dssp             CCEEEESSC-BCCCSSSCCCBCTTCEEESCCCCS-SSCEEEEET-TEEEEEECGGGEEECC
T ss_pred             CcEEEECee-ECCCCcCccCCCCCCEEEEEEcCC-CCeEEEEEC-CCCEEEEchHHcEECc
Confidence            467899999 667888999999999999999654 589999975 5566999999999875

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=5.2e-14  Score=94.15  Aligned_cols=57  Identities=19%  Similarity=0.395  Sum_probs=49.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  .++.|+||++||+++..
T Consensus         9 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~~   65 (70)
T 2ega_A            9 EQYVVVSN-YKKQENSELSLQAGEVVDVIEKNE-SGWWFVST--SEEQGWVPATYLEAQNS   65 (70)
T ss_dssp             BCEECCSC-CCCCSSSSCCCCTTCBCEEEEECT-TSEEEEEC--SSCEEEEEGGGCEESCC
T ss_pred             cEEEECce-ECCCCCCcccCCCCCEEEEEEccC-CCeEEEEE--CCCEEEEehHHcEECCC
Confidence            56899999 667888999999999999999754 57999996  47999999999998753

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=1.5e-13  Score=94.63  Aligned_cols=58  Identities=24%  Similarity=0.389  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||+|++  .++.|+||+|||+.+..
T Consensus        10 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~~   67 (81)
T 2ysq_A           10 IVSAEAVWD-HVTMANRELAFKAGDVIKVLDASN-KDWWWGQI--DDEEGWFPASFVRLWVN   67 (81)
T ss_dssp             CEEEEESSC-CCCSSSSSCCCCTTCEEEEEECCS-SSEEEEEC--SSCEEEEEGGGEEESSC
T ss_pred             ceEEEEeee-ECCCCCCcCCCCCCCEEEEEEEcC-cCEEEEEE--CCCEEEechHHEEEcCC
Confidence            467899999 667788999999999999999754 68999996  48999999999998764

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.46  E-value=9.8e-14  Score=96.43  Aligned_cols=58  Identities=16%  Similarity=0.390  Sum_probs=50.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... .+||+|++ .+++.|+||+|||+++.
T Consensus        19 ~~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           19 ETVVIALYD-YQTNDPQELALRRNEEYCLLDSSE-IHWWRVQD-RNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             SCEEEESSC-CCCSCSSBCCCCBTEEEEEEECCS-SSEEEEEC-SSSCEEEEETTTCEECC
T ss_pred             CeEEEECcC-CCCCCCCcCCCCCCCEEEEEEecC-CCeEEEEE-CCCCEEEEehHHeEEcc
Confidence            367999999 667888999999999999999764 57999987 57899999999999974

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.46  E-value=4e-14  Score=96.85  Aligned_cols=58  Identities=21%  Similarity=0.465  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCC-CccccCCCEEEEEecCCC----CCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEG-KLYIDAGDQIVIIEGDPE----CHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-~L~f~~GDiI~Vid~~~e----~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...+++ +|+|++||+|.|++...+    .+||+|++ ++++.|+||+|||+.+.
T Consensus        15 ~~~~alyd-y~~~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~-~~g~~G~~P~~yv~~~~   77 (80)
T 2v1r_A           15 EFARALYD-FVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEIIK   77 (80)
T ss_dssp             EEEEESSC-BCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEC-TTSCEEEEEGGGEEEC-
T ss_pred             EEEEECcc-CCCCCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEe-CCCCeEEEEHHHeEEcC
Confidence            57899999 6677888 999999999999997642    27999997 47899999999999875

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.9e-14  Score=94.39  Aligned_cols=57  Identities=14%  Similarity=0.241  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |....+++|+|++||+|.|++... ..||.|++.  ++.|+||++||+++..
T Consensus         9 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~--g~~G~~P~~yv~~~~~   65 (71)
T 2dnu_A            9 EKYVTVQP-YTSQSKDEIGFEKGVTVEVIRKNL-EGWWYIRYL--GKEGWAPASYLKKAKD   65 (71)
T ss_dssp             EEEECSSC-BCCSSTTBCCBCTTCEEEECCCCS-SSEEEEEET--TEEEEEEGGGCEECCC
T ss_pred             CEEEECCc-cCCCCCCCCcCCCCCEEEEeECCC-CCeEEEEEC--CcEEEEEHHHeEEccC
Confidence            57899999 667888999999999999999654 579999985  8999999999998863

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.46  E-value=4.6e-14  Score=95.76  Aligned_cols=57  Identities=16%  Similarity=0.344  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++...+..||+|+.  +++.|+||+|||+.+.
T Consensus        10 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A           10 MEAIAKYD-FKATADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEECCBCSSCSSEEEEEE--TTEEEEEEGGGEEEEC
T ss_pred             eEEEECcc-CCCCCCCeeeEcCCCEEEEeEecCCCCEEEEEE--CCCEEEEehHhEEEcC
Confidence            57899999 667888999999999999999765567999995  7899999999999764

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.46  E-value=4.5e-14  Score=93.97  Aligned_cols=57  Identities=21%  Similarity=0.405  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... ..||+|+.  +++.|+||+|||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   63 (68)
T 1wi7_A            7 GRRCQVAFS-YLPQNDDELELKVGDIIEVVGEVE-EGWWEGVL--NGKTGMFPSNFIKELS   63 (68)
T ss_dssp             CCCEEESSC-BCCSSTTBCCBCTTCEECCCEEEE-TTEEEECS--TTCCEEEETTSEEECC
T ss_pred             CCEEEECcc-CCcCCCCCccCcCCCEEEEEEcCC-CCeEEEEE--CCcEEEEchHHEEECC
Confidence            467899999 667888999999999999998643 57999994  7999999999999875

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.45  E-value=1.2e-13  Score=97.54  Aligned_cols=58  Identities=26%  Similarity=0.363  Sum_probs=50.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC-CCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~-~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. .+.+||+|+.  +++.|+||+|||+.+..
T Consensus         6 ~~~~Alyd-y~a~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~~--~g~~G~~P~~yv~~~~~   64 (93)
T 1uff_A            6 SGYRALYP-FEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSF--QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CCEEESSC-BCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEE--TTEEEEEETTTEEECCS
T ss_pred             EEEEECcc-CCCCCCCCcCCCCCCEEEEeEccCCCCCEEEEEE--CCCEEEechHHeEEcCC
Confidence            57899999 66778899999999999999864 2467999995  58999999999998753

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.45  E-value=4.8e-14  Score=94.64  Aligned_cols=56  Identities=20%  Similarity=0.329  Sum_probs=48.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCC-Ccc---ceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNI---GMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt-g~~---G~FP~n~V~p~   84 (161)
                      ..++|+|| |....+++|+|++||+|.| +.. +.+||.|++..+ ++.   |+||+|||+++
T Consensus        11 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v-~~~-~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~   70 (72)
T 2kgt_A           11 PKYVGLWD-FKSRTDEELSFRAGDVFHV-ARK-EEQWWWATLLDEAGGAVAQGYVPHNYLAER   70 (72)
T ss_dssp             CEEECCTT-CBCSSTTSCBCCTTCCEEE-EEE-CSSCEEEEEECTTSCEEEEEEECTTTSEEE
T ss_pred             cEEEEccc-CCCCCcCCcCCCCCCEEEE-eeC-CCCEEEEEEcCCCCCEeCCcEEcHhHEEEc
Confidence            57899999 6678889999999999999 764 457999998766 899   99999999976

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.45  E-value=5.4e-14  Score=92.10  Aligned_cols=57  Identities=26%  Similarity=0.433  Sum_probs=49.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |...++++|+|++||+|.|++... ..||+|+.  +++.|+||+|||+++.
T Consensus         7 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            7 KRQCKVLFE-YIPQNEDELELKVGDIIDINEEVE-EGWWSGTL--NNKLGLFPSNFVKELE   63 (65)
T ss_dssp             -CEEEECSC-BCCSSTTBCCBCTTCEEEEEEEEE-TTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CeEEEEeee-eCCCCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCCEEEeehHHEEECc
Confidence            467899999 667788999999999999999654 57999994  7899999999999864

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.45  E-value=1.6e-13  Score=94.03  Aligned_cols=57  Identities=23%  Similarity=0.362  Sum_probs=50.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |....+++|+|++||+|.|++... ..||+|+.  +++.|+||+|||+++.
T Consensus        17 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   73 (79)
T 1x69_A           17 GITAVALYD-YQAAGDDEISFDPDDIITNIEMID-DGWWRGVC--KGRYGLFPANYVELRQ   73 (79)
T ss_dssp             CCCEEESSC-CCCSSSSBCCCCTTCEEEEEEECS-SSEEEEEE--TTEEEEEETTSEEECC
T ss_pred             CeEEEECcc-CCCCCCCCcCcCCCCEEEEeEecC-CCeEEEEE--CCcEEEechHHEEECC
Confidence            467999999 667788999999999999999764 57999994  7899999999999875

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.45  E-value=7.8e-14  Score=93.18  Aligned_cols=56  Identities=21%  Similarity=0.277  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++... ..||+|+.  +++.|+||+|||+.+.
T Consensus        14 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~~~   69 (72)
T 4glm_A           14 TYGVALYR-FQALEPNELDFEVGDKIRILATLE-DGWLEGSL--KGRTGIFPYRFVKLCP   69 (72)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEEECS-TTEEEEEE--TTEEEEEEGGGEEEEC
T ss_pred             eEEEECcc-CCCCCCCcCCCCCCCEEEEEEccC-CCEEEEEE--CCcEEEEChHHeEECC
Confidence            57899999 667788999999999999999764 57999994  6899999999999874

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.45  E-value=5.7e-14  Score=98.71  Aligned_cols=59  Identities=22%  Similarity=0.483  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCC-CccccCCCEEEEEecCCC----CCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEG-KLYIDAGDQIVIIEGDPE----CHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-~L~f~~GDiI~Vid~~~e----~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |...+++ +|+|++||+|.|++...+    .+||+|++ ++++.|+||+|||+.+..
T Consensus        15 ~~~~alyd-y~~~~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~-~~g~~G~~P~~yv~~~~~   78 (92)
T 1jqq_A           15 EFARALYD-FVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEIIKR   78 (92)
T ss_dssp             EEEEESSB-BCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEE-TTSCEEEEEGGGEEECCC
T ss_pred             EEEEECcc-CCCCCCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEe-CCCCEEEEehHHeEECCC
Confidence            57899999 6677888 999999999999997642    37999998 579999999999998863

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.45  E-value=7.8e-14  Score=93.94  Aligned_cols=58  Identities=22%  Similarity=0.367  Sum_probs=50.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCC-CccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt-g~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |...++++|+|++||+|.|++..  .+||+|++.++ ++.|+||+|||+...
T Consensus        11 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~--~~W~~g~~~~~~g~~G~~P~~yv~~~~   69 (74)
T 2m0y_A           11 EKYGVAFYN-YDARGADELSLQIGDTVHILETY--EGWYRGYTLRKKSKKGIFPASYIHLKE   69 (74)
T ss_dssp             CSCEEECSE-ECCCSSSBCCEETTEEEEEEEBS--SSCEEEEESSCSSCCEEECGGGEEECC
T ss_pred             CeEEEEcee-eCCCCcCcccCCCCCEEEEEEcC--CCeEEEEECCCCCCEEEEehHHEEEec
Confidence            367899999 66788899999999999999975  46999998655 899999999999764

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.44  E-value=2.8e-14  Score=105.48  Aligned_cols=58  Identities=22%  Similarity=0.411  Sum_probs=49.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEec----CCCCCceeeecCCC--------CccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEG----DPECHWWKGQNLST--------FNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~----~~e~~WW~Gqn~rt--------g~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.    ..+.+||+|++.++        ++.|+||+|||+++
T Consensus        45 ~~~~Alyd-y~a~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           45 FKVQAQHD-YTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             eEEEECCc-cCCCCCCccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            56899999 6678889999999999999992    33467999987544        88999999999975

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.43  E-value=1.1e-13  Score=119.73  Aligned_cols=93  Identities=23%  Similarity=0.382  Sum_probs=70.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGH  105 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtgh  105 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++..  .+||+|++..+|+.|+||+|||.+....                  
T Consensus         9 ~~~~al~~-~~~~~~~el~~~~gd~~~v~~~~--~~W~~~~~~~~g~~G~~P~~yv~~~~~l------------------   67 (454)
T 1qcf_A            9 IIVVALYD-YEAIHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVDSL------------------   67 (454)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECC--TTEEEEEETTTCCEEEEEGGGEEETTCG------------------
T ss_pred             eEEEECcc-cCCcCCCcCcccCCCEEEEEecC--CCCeEEEECCCCceEEecchhccccccc------------------
Confidence            56899999 77888899999999999999974  4699999877899999999999986411                  


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCccccCCcc--ccCCCCCeeEeeehh
Q psy2788         106 GDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTT--QGSQNGGATVAHRST  153 (161)
Q Consensus       106 g~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~l--~~~~ng~~~~~~r~~  153 (161)
                         ....|          +-+.|.+.++-.. |  ....+|.||||..++
T Consensus        68 ---e~~~W----------~~g~i~r~~ae~~-L~~~~~~~G~FLvR~s~~  103 (454)
T 1qcf_A           68 ---ETEEW----------FFKGISRKDAERQ-LLAPGNMLGSFMIRDSET  103 (454)
T ss_dssp             ---GGSTT----------EETTCCHHHHHHH-HHSTTCCTTCEEEEECSS
T ss_pred             ---ccccc----------cccccchhhhhhh-hhcCCCCCceEEEEECcC
Confidence               11445          6677776432211 3  456789999997644

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.42  E-value=1.2e-13  Score=93.87  Aligned_cols=56  Identities=27%  Similarity=0.505  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |...++++|+|++||+|.|++... ..||+|++  +++.|+||++||+.+.
T Consensus        11 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   66 (76)
T 1ujy_A           11 LIVKARFN-FKQTNEDELSVCKGDIIYVTRVEE-GGWWEGTL--NGRTGWFPSNYVREIK   66 (76)
T ss_dssp             EEEECCSC-BCCSSTTSCCBCSSCCEEESSCCS-SSCEEEEE--TTEEEEECTTTSEECC
T ss_pred             EEEEECcc-CCcCCCCcccCCCCCEEEEEEecC-CCEEEEEE--CCCEEEechHHEEECC
Confidence            57899999 667788999999999999998654 57999995  7899999999999874

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.42  E-value=2.1e-13  Score=101.08  Aligned_cols=59  Identities=12%  Similarity=0.280  Sum_probs=51.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeec-CCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQN-LSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn-~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|| |.+.++++|+|++||+|.|++.. +.+||.|++ .++|+.|+||+|||+.+.
T Consensus         3 ~~~~~Alyd-y~a~~~~ELsf~~Gd~i~vl~~~-~~~Ww~g~~~~~~g~~G~~P~nyv~~~~   62 (120)
T 2kym_A            3 PLFAVTLYE-FKAERDDELDVSPGENLSICAHY-DYEWFIAKPINRLGGPGLVPVSYVRIID   62 (120)
T ss_dssp             CCEEEECSC-BCCCSTTCCCBCTTCEEEEEEEE-TTTEEEEEESSSCSCCCCEEGGGEEEEC
T ss_pred             CEEEEEccc-CCCCCCCccCCCCCCEEEEEEec-CCCEEEEEECCCCCCEEEEchHHEEEcc
Confidence            567899999 66788899999999999999975 457999997 467899999999999874

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.42  E-value=2.2e-13  Score=95.23  Aligned_cols=57  Identities=14%  Similarity=0.348  Sum_probs=49.9

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |.+.++++|+|++||+|.|++... .+||.|.  .+++.|+||+|||+++.
T Consensus        17 ~~~~~Alyd-y~a~~~~eLsf~~Gd~i~Vl~~~~-~gWw~g~--~~g~~G~~P~~yv~~~~   73 (83)
T 1neg_A           17 KELVLALYD-YQEKSPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLA   73 (83)
T ss_dssp             CCEEEESSC-BCCSSTTBCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECC
T ss_pred             ceEEEEccc-cCCCCCCccccCCCCEEEEEEecC-CCEEEEE--ECCeEEEEEHHHEEECC
Confidence            467899999 667888999999999999999754 5799996  47899999999999874

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.42  E-value=2.1e-14  Score=98.02  Aligned_cols=56  Identities=14%  Similarity=0.385  Sum_probs=49.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|| |...++++|+|++||+|.|++... .+||.|++ .+++.|+||+|||++.
T Consensus        21 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yv~~~   76 (77)
T 1awj_A           21 TLVIALYD-YQTNDPQELALRCDEEYYLLDSSE-IHWWRVQD-KNGHEGYAPSSYLVEK   76 (77)
T ss_dssp             SCCCCCCC-BCCCCTTSCCBCSSSCCSCCCTTS-SSBCCCCC-SSSCCCCCBSTTCCCC
T ss_pred             eEEEECcc-CCCCCcCCcCCCCCCEEEEEEecC-CCCEEEEE-CCCCEEEEehHHEEEc
Confidence            56899999 667888999999999999999754 57999997 5789999999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.41  E-value=9.7e-14  Score=121.74  Aligned_cols=92  Identities=18%  Similarity=0.360  Sum_probs=71.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTG  104 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtg  104 (161)
                      +..++|+|| |.+.++++|+|++||+|+|++...+.+||.|++  +++.|+||+|||+++...                 
T Consensus        43 ~~~~~alyd-~~~~~~~els~~~gd~~~v~~~~~~~~w~~~~~--~~~~G~~P~~yv~~~~~l-----------------  102 (495)
T 1opk_A           43 PNLFVALYD-FVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSNYITPVNSL-----------------  102 (495)
T ss_dssp             -CEEEESSC-BCCCSTTBCCBCTTCEEEEEEECTTSSEEEEEC--SSCEEEEEGGGEEESSSG-----------------
T ss_pred             CcEEEEeCC-cCCCCCCCCCccCCCEEEEeecCCCCCceeeee--cCCcceeccccccccccc-----------------
Confidence            467999999 778888999999999999999775678999996  477899999999996411                 


Q ss_pred             CCCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCeeEeeehh
Q psy2788         105 HGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGATVAHRST  153 (161)
Q Consensus       105 hg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r~~  153 (161)
                          ....|          +-++|.+-   .++  |....+|.||||..++
T Consensus       103 ----e~~~w----------yhg~i~r~---~ae~ll~~~~~G~fLvR~s~~  136 (495)
T 1opk_A          103 ----EKHSW----------YHGPVSRN---AAEYLLSSGINGSFLVRESES  136 (495)
T ss_dssp             ----GGSTT----------EEEECCHH---HHHHHGGGCCTTEEEEEECSS
T ss_pred             ----cchhh----------hccCCCHH---HHHHHhhCCCCceEEEEeCCC
Confidence                11345          67777763   333  6666799999997654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.41  E-value=1.7e-13  Score=121.40  Aligned_cols=94  Identities=22%  Similarity=0.363  Sum_probs=70.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGH  105 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtgh  105 (161)
                      ..++|+|| |++.++++|+|++||+|+|++.. +.+||+|++..+|+.|+||+|||++....                  
T Consensus        86 ~~~~alyd-~~~~~~~el~~~~gd~i~v~~~~-~~~ww~~~~~~~g~~G~~P~~yv~~~~~l------------------  145 (535)
T 2h8h_A           86 TTFVALYD-YESRTETDLSFKKGERLQIVNNT-EGDWWLAHSLSTGQTGYIPSNYVAPSDSI------------------  145 (535)
T ss_dssp             -CEEESSC-BCCCSSSBCCBCTTCEEEEEECS-SSSEEEEEETTTCCEEEEEGGGEEETTSG------------------
T ss_pred             cEEEEccc-cCCcCCCcCCcCCCCEEEEEEec-CCCceEEEECCCCcceEecchhhcccccc------------------
Confidence            46899999 77888899999999999999976 46899999877899999999999985311                  


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCccccCCccc--cCCCCCeeEeeehh
Q psy2788         106 GDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTTQ--GSQNGGATVAHRST  153 (161)
Q Consensus       106 g~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~l~--~~~ng~~~~~~r~~  153 (161)
                         ....|          +-+.|.+-++-.. |.  .+.+|.||||..++
T Consensus       146 ---~~~~w----------y~g~i~r~~ae~~-L~~~~~~~G~FLvR~S~~  181 (535)
T 2h8h_A          146 ---QAEEW----------YFGKITRRESERL-LLNAENPRGTFLVRESET  181 (535)
T ss_dssp             ---GGSTT----------BCCSCCHHHHHHH-HTCTTCCTTEEEEEECSS
T ss_pred             ---cccce----------eccccCHHHHHHH-hccCCCCCCeEEEEecCC
Confidence               01334          6677776332221 32  34679999997554

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.40  E-value=1.6e-13  Score=92.76  Aligned_cols=55  Identities=13%  Similarity=0.298  Sum_probs=47.2

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      .++|+++ |.. ++++|+|++||+|.|++... .+||.|+  .+++.|+||+|||+++..
T Consensus         2 ~a~alyd-y~~-~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~   56 (73)
T 2kxd_A            2 GAPPLPP-YSA-GGREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLDS   56 (73)
T ss_dssp             CCCCCCS-SCC-CSCCCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECCS
T ss_pred             eEEEeee-eCC-CCCEeeEcCCCEEEEEEecC-CCEEEEE--ECCCEEEEehHHeEEcCC
Confidence            4679999 555 78999999999999999764 5799998  478999999999998753

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.40  E-value=4.1e-13  Score=94.68  Aligned_cols=60  Identities=15%  Similarity=0.247  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCC---CCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPE---CHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e---~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |....+++|+|++||+|.|++...+   ..||.|++. .++.|+||+|||+++..
T Consensus        17 ~~~~~alyd-y~a~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~-~~~~G~~P~~yv~~~~~   79 (93)
T 1wxu_A           17 HVVARAEYD-FVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLD-GQTTGLIPANYVKILGK   79 (93)
T ss_dssp             BBCEEESSC-BCCSSSSBCCBCSSCBCEECCTTTSCSCSSCEEEESS-SSSCEEECSTTEEECCC
T ss_pred             CEEEEECcc-CCCCCCCccCcCCCCEEEEEECCCCCCCCCcEEEEeC-CcCEEEEehHHEEEcCC
Confidence            467899999 6678889999999999999997653   579999853 44599999999998763

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.39  E-value=1.3e-13  Score=119.27  Aligned_cols=94  Identities=23%  Similarity=0.387  Sum_probs=70.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGH  105 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtgh  105 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++.. +.+||+|++.++|+.|+||+|||++.....                 
T Consensus         3 ~~~~al~~-~~~~~~~el~~~~gd~~~v~~~~-~~~ww~~~~~~~g~~G~~P~~yv~~~~~le-----------------   63 (452)
T 1fmk_A            3 TTFVALYD-YESRTETDLSFKKGERLQIVNNT-EGDWWLAHSLSTGQTGYIPSNYVAPSDSIQ-----------------   63 (452)
T ss_dssp             EEEEESSC-BCCCSSSBCCBCTTCEEEESCCC-SSSEEEEEETTTCCEEEEEGGGEEETTSGG-----------------
T ss_pred             eEEEECCc-cCCCCCCCCCccCCCEEEEeccC-CCCceEEEEcCCCcccccCccccccccccc-----------------
Confidence            46899999 77888999999999999999976 467999998778999999999999863110                 


Q ss_pred             CCCCCCCCCCCCCCCccccCCCCCCccccCCcc--ccCCCCCeeEeeehh
Q psy2788         106 GDPWGKSWGSPSHIDPMYLNNPMDPPDILGLTT--QGSQNGGATVAHRST  153 (161)
Q Consensus       106 g~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~l--~~~~ng~~~~~~r~~  153 (161)
                          ...|          +-++|.+-++-.. |  ..+.+|.||||..++
T Consensus        64 ----~~~w----------~~g~~~r~~ae~~-L~~~~~~~G~FLvR~s~~   98 (452)
T 1fmk_A           64 ----AEEW----------YFGKITRRESERL-LLNAENPRGTFLVRESET   98 (452)
T ss_dssp             ----GSTT----------EEETCCHHHHHHH-HTCTTSCTTEEEEEECSS
T ss_pred             ----cccc----------ccCCccHHHHHHH-hccCCCCCceEEEEeCCC
Confidence                1334          5667776332211 3  334679999997654

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.39  E-value=1.7e-13  Score=100.45  Aligned_cols=60  Identities=12%  Similarity=0.292  Sum_probs=49.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecC-CCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNL-STFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~-rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|| |.+.++++|+|++||+|+|++.. +.+||.|+.. ++++.|+||+|||+.+...
T Consensus         6 ~~~~Alyd-y~a~~~~ELsf~~Gd~i~vl~~~-~~~Ww~g~~~g~~g~~G~fPsnYV~~~~~~   66 (108)
T 2rqv_A            6 LYAIVLYD-FKAEKADELTTYVGENLFICAHH-NCEWFIAKPIGRLGGPGLVPVGFVSIIDIA   66 (108)
T ss_dssp             CCEEESSC-CCCCSSSBCCCCSSEEECCCCEE-TTTEEEECCSSSSCCCEEEESTTCBCCCSS
T ss_pred             eEEEECCC-cCCCCCCcCCcCCCCEEEEeEec-CCCEEEEEECCccCCeeEeecceEEEecCC
Confidence            56899999 67788899999999999999865 4579999852 3455699999999987543

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.39  E-value=1.9e-13  Score=101.34  Aligned_cols=56  Identities=21%  Similarity=0.348  Sum_probs=49.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |...++++|+|++||+|.|++..  .+||+|++.+ +++.|+||+|||+.+
T Consensus        60 ~~~~Alyd-y~a~~~~eLsf~~Gd~i~vl~~~--~gWw~g~~~~~~g~~G~fP~nyV~~~  116 (119)
T 2rqr_A           60 RHGVAIYN-FQGSGAPQLSLQIGDVVRIQETC--GDWYRGYLIKHKMLQGIFPKSFIHIK  116 (119)
T ss_dssp             EEEEBCSC-BCCCSTTBCCBCTTCEEEEEEEE--TTEEEEEESSCTTCEEEEEGGGBCCC
T ss_pred             eEEEEccc-cCCCCCCcccCcCCCEEEEEEcC--CCEEEEEECCCCCCEEEeChhHEEEe
Confidence            57899999 66788899999999999999975  3799999866 689999999999875

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.39  E-value=5.4e-13  Score=101.72  Aligned_cols=57  Identities=26%  Similarity=0.484  Sum_probs=50.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.+.++++|+|++||+|.|++...+.+||.|++  +++.|+||+|||+++.
T Consensus         6 ~~~~Alyd-y~a~~~~ELsf~~Gd~i~Vl~~~~~~gWw~g~~--~g~~G~fP~~yv~~~~   62 (142)
T 2kbt_A            6 GTAKARYD-FCARDRSELSLKEGDIIKILNKKGQQGWWRGEI--YGRIGWFPSNYVEEDY   62 (142)
T ss_dssp             CEEEESSC-CCCSSSSBCCCCTTCEEEEEECCCSSSEEEEEE--TTEEEEEETTSEEESS
T ss_pred             eEEEECCc-cCCCCCCcCCCCCCCEEEEEEecCCCCeEEEEE--CCeeEEechHHEEEcc
Confidence            57899999 667788999999999999999754568999996  7899999999999875

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.38  E-value=6.2e-13  Score=94.61  Aligned_cols=57  Identities=23%  Similarity=0.476  Sum_probs=49.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. +.+||+|+  .+++.|+||+|||+.+..
T Consensus        35 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~~~   91 (98)
T 1udl_A           35 CQVIAMYD-YAANNEDELSFSKGQLINVMNKD-DPDWWQGE--INGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             EEEEESSC-CCCSSTTSCCCCTTCEEEECBCC-SSSEEBCB--SSSCBCCEETTSEEECCC
T ss_pred             eEEEECCC-CCCCCCCccCCcCCCEEEEEEec-CCCEEEEE--ECCcEEEEehHHeEEcCC
Confidence            56889999 66788899999999999999965 45799999  378999999999998763

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.36  E-value=4.5e-13  Score=106.13  Aligned_cols=55  Identities=16%  Similarity=0.366  Sum_probs=44.1

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|+|+ |.+..+++|+|++||+|.|++...+..||+|+.  +++.|+||+|||+..
T Consensus         2 ~~~al~~-~~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~~P~~yv~~~   56 (217)
T 1gri_A            2 EAIAKYD-FKATADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKNYIEMK   56 (217)
T ss_dssp             EEEECSC-BCCCSSSCCCBCTTCEEEC------CCEEEEES--SSCEEEEEGGGEECC
T ss_pred             EEEEeec-cCCcCCCcCCCCCCCEEEEEeccCCCCeEeecc--CCccceECCcccccc
Confidence            5789999 667888999999999999999765567999984  789999999999865

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.36  E-value=6.9e-13  Score=102.69  Aligned_cols=55  Identities=22%  Similarity=0.463  Sum_probs=48.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..++|+|| |...++++|+|++||+|.|+++. +.+||+|++ .+|+.|+||+|||+.
T Consensus       119 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~-~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          119 EVVVGTFK-FTGERETDLPFEQGERLEILSKT-NQDWWEARN-ALGTTGLVPANYVQI  173 (174)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEECC-SSSEEEEEC-TTCCEEEEEGGGEEE
T ss_pred             cEEEEecC-cccCCCCccccccCCEEEEEEcc-CCCeEEEEE-CCCCEEEEChHHEEe
Confidence            46899999 66788899999999999999976 458999997 478999999999974

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.34  E-value=1.6e-13  Score=92.06  Aligned_cols=56  Identities=23%  Similarity=0.365  Sum_probs=47.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccc-eecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIG-MFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G-~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|.|++... ..||+|++  .++.| +||+|||+++.
T Consensus         7 ~~~~al~d-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~gG~~P~~yv~~~~   63 (71)
T 1hsq_A            7 CAVKALFD-YKAQREDELTFIKSAIIQNVEKQE-GGWWRGDY--GGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             SCCCCSSC-CCCSSSSSCCCCTTCCCBSCCCBT-TTEECCBC--SSSCSCCEETTTCCSCS
T ss_pred             eEEEECCC-CCcCCCCccCCCCCCEEEEEEecC-CCEEEEEE--CCeEEeEEChHHcEECC
Confidence            56789999 667888999999999999999754 57999997  45666 99999999875

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.34  E-value=3.7e-13  Score=109.48  Aligned_cols=58  Identities=22%  Similarity=0.410  Sum_probs=48.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEec----CCCCCceeeecCC--------CCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEG----DPECHWWKGQNLS--------TFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~----~~e~~WW~Gqn~r--------tg~~G~FP~n~V~p~   84 (161)
                      ..++|||+ |....+++|+|++||+|.|++.    ..+.+||+|++.+        .++.|+||+|||+++
T Consensus       143 ~~~rALYd-Y~a~~~dELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          143 FKVQAQHD-YTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             EEEEESSC-BCCCSTTCCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             eEEEECCC-cCCCCCCcCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            47899999 6678889999999999999992    2346899999643        388999999999875

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=99.30  E-value=1.9e-12  Score=116.92  Aligned_cols=59  Identities=17%  Similarity=0.157  Sum_probs=53.1

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|+ |.++++++|+|++||+|.|++... .+||+|++.++|++|+||+|||++..
T Consensus       442 ~~~~~aly~-y~a~~~dELs~~~GD~i~v~~~~~-~gW~~G~~~~~g~~G~fPsnyV~~~~  500 (526)
T 2de0_X          442 AHNQIAIYA-HQPRTADEIPMEPGDIIGVAGNHW-DGYSKGVNRKLGRTGLYPSYKVREKI  500 (526)
T ss_dssp             CCEEEECSC-BCCSSTTBCCBCTTCEEEEEEECS-SSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             ccceEEeec-CCCCCCCcCCcCCCCEEEEccccC-CCeeEEEeCCCCCEEEECchheeEcc
Confidence            467899999 778889999999999999998764 57999999889999999999999875

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.24  E-value=7.7e-12  Score=98.99  Aligned_cols=57  Identities=33%  Similarity=0.713  Sum_probs=50.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...++|+|| |.+.++++|+|++||+|.|++.. +.+||.|++  +|+.|+||+|||+++.
T Consensus       158 ~~~~~al~~-y~~~~~~eL~~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~~~  214 (217)
T 1gri_A          158 PTYVQALFD-FDPQEDGELGFRRGDFIHVMDNS-DPNWWKGAC--HGQTGMFPRNYVTPVN  214 (217)
T ss_dssp             CCEEEESSC-CCCSSTTBCCCCTTCEEEEEECC-SSSEEEEEC--SSCEEEEEGGGEEEEC
T ss_pred             ceEEEecCC-ccCCCCCcCCCCCCCEEEEEEeC-CCCeEEEEE--CCeEEEEeHHHeEECC
Confidence            367999999 66788899999999999999975 457999996  6899999999999874

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.20  E-value=3.5e-12  Score=103.20  Aligned_cols=59  Identities=20%  Similarity=0.387  Sum_probs=51.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|| |...++++|+|++||+|.|++... .+||+|++. ++++|+||+|||+++...
T Consensus       137 ~~~~al~d-y~~~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~~~  195 (230)
T 2dvj_A          137 EYVRALFD-FNGNDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEKYRPA  195 (230)
T ss_dssp             CCCBCCSC-CCCSSSSSCCCCSSCBCCCCBCSC-SSEEEEECT-TSCEEEEEGGGSCCCCSS
T ss_pred             eeEEEeee-ecCCCCCCccCcCCCEEEEEEccC-CCcEEEEeC-CCCEEEEehHHeEEcCCC
Confidence            45889999 667888999999999999999754 689999964 789999999999988644

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=99.19  E-value=8.5e-12  Score=115.10  Aligned_cols=62  Identities=26%  Similarity=0.312  Sum_probs=51.6

Q ss_pred             CCceEEEecccCC--CCCCCCccccCCCEEEEEecC----CCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCHE--IDEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~~--~~e~~~L~f~~GDiI~Vid~~----~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +...++|++||..  ..++++|+|++||+|+|++..    .+.+||+|+|.+||+.|+||++||..++
T Consensus       572 rs~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lp  639 (655)
T 3pvl_A          572 RSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMP  639 (655)
T ss_dssp             HCCEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cchhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECC
Confidence            4689999999432  356789999999999999873    3468999999999999999999999987

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.16  E-value=1.6e-11  Score=96.83  Aligned_cols=57  Identities=21%  Similarity=0.347  Sum_probs=49.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++...  +||+|++.+ .++.|+||+|||++..
T Consensus        18 ~~~~Alyd-f~~~~~~eLs~~~Gd~i~v~~~~~--~W~~g~~~~~~g~~G~fP~nyV~~~~   75 (184)
T 3a98_A           18 RHGVAIYN-FQGSGAPQLSLQIGDVVRIQETCG--DWYRGYLIKHKMLQGIFPKSFIHIKE   75 (184)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEEEET--TEEEEEETTEEEEEEEEEGGGEEEEC
T ss_pred             eEEEEeee-eCCCCCCCCCcCCCCEEEEEecCC--CEEEEEEecCCCceEEECcceEEEec
Confidence            57899999 667888999999999999999754  499999754 4789999999999864

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.16  E-value=2.9e-11  Score=95.42  Aligned_cols=56  Identities=16%  Similarity=0.223  Sum_probs=49.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |....+++|+|++||+|+|++.. +.+||+|+.  ++++|+||+|||+++.
T Consensus        82 ~~~~al~d-y~a~~~~eLs~~~Gd~i~vl~~~-~~gWw~g~~--~g~~G~~P~~yv~~~~  137 (193)
T 1ng2_A           82 EPYVAIKA-YTAVEGDEVSLLEGEAVEVIHKL-LDGWWVIRK--DDVTGYFPSMYLQKSG  137 (193)
T ss_dssp             EEEEESSC-BCCCSTTBCCBCTTCEEEEEECC-TTSEEEEEE--TTEEEEEEGGGEEETT
T ss_pred             eeeeeccc-cCCCCCCcccccCCCEEEEEEec-CCCeEEEEE--CCCEEEEehHHeEECC
Confidence            56899999 66788899999999999999975 457999995  7899999999999875

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.16  E-value=1.9e-11  Score=96.45  Aligned_cols=58  Identities=19%  Similarity=0.452  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|+ |...++++|+|++||+|.|++... .+||+|+  .+++.|+||++||+++..
T Consensus        11 ~~~~~al~d-y~~~~~~eLs~~~Gd~i~vl~~~~-~gWw~g~--~~g~~G~~P~~yv~~~~~   68 (193)
T 1ng2_A           11 LQTYRAIAD-YEKTSGSEMALSTGDVVEVVEKSE-SGWWFCQ--MKAKRGWIPASFLEPLDS   68 (193)
T ss_dssp             CEEEECSSC-BCCSSTTCCCBCTTCEEEEEECCT-TSCCEEE--ECCCCCCCCGGGCCCSSC
T ss_pred             CcEEEEcCC-cCCCCCCcCCCCCCCEEEEEEecC-CCeEEEE--ECCeeeEechheEEeecc
Confidence            467899999 667888999999999999999754 5799999  478999999999998654

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.15  E-value=3.2e-11  Score=98.27  Aligned_cols=56  Identities=20%  Similarity=0.481  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.+..+++|+|++||+|.|++... .+||.|+.  +|+.|+||+|||+++.
T Consensus         3 ~~~~a~~~-~~~~~~~el~~~~gd~i~v~~~~~-~~w~~~~~--~g~~G~~P~~~v~~~~   58 (283)
T 3jv3_A            3 CQVIGMYD-YTAQNDDELAFSKGQIINVLNKED-PDWWKGEV--SGQVGLFPSNYVKLTT   58 (283)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEECCS-TTEEEEEE--TTEEEEEEGGGEEEGG
T ss_pred             eEEEEccc-cCCCCCCcCCCCCCCEEEEEecCC-CCEEEEEE--CCCCCcCCCccccccC
Confidence            46899999 667888999999999999999764 57999984  7899999999999865

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.15  E-value=3.5e-11  Score=79.12  Aligned_cols=44  Identities=16%  Similarity=0.447  Sum_probs=38.8

Q ss_pred             CCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          39 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        39 e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ++++|+|++||+|.|++... .+||+|+  .+++.|+||+|||+++.
T Consensus         2 ~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~   45 (63)
T 1tuc_A            2 GPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLD   45 (63)
T ss_dssp             CCCCCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECS
T ss_pred             CccccCCCCCCEEEEEEecC-CCEEEEE--ECCcEEEEeHHHEEEcC
Confidence            46899999999999999764 5799998  47899999999999875

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.14  E-value=7.6e-11  Score=98.92  Aligned_cols=59  Identities=24%  Similarity=0.434  Sum_probs=51.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|+ |...++++|+|++||+|.|++.. +.+||+|++ .+++.|+||+|||+.+...
T Consensus       135 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~-~~g~~G~~P~~yv~~~~~~  193 (304)
T 2eyz_A          135 EYVRALFD-FNGNDEEDLPFKKGDILRIRDKP-EEQWWNAED-SEGKRGMIPVPYVEKYRPA  193 (304)
T ss_dssp             CEEEECSC-CCCSCSSSCCCCTTCEEEEEECC-SSSEEEEEC-TTSCEEEEESTTEEECCCS
T ss_pred             eeEEEEee-ecCCCCCcCcccCCCEEEEEEec-CCCcEEEEe-CCCceeccchhccccccCC
Confidence            46899999 66788899999999999999975 458999997 4789999999999987644

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.14  E-value=2.1e-11  Score=102.30  Aligned_cols=58  Identities=16%  Similarity=0.311  Sum_probs=49.3

Q ss_pred             CceEEEecccCC--CCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHE--IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~--~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      +..++|+|| |.  +.++++|+|++||+|+|++... .+||.|+.  .|++|+||+|||+.+..
T Consensus       237 ~~~~~al~d-~~~~a~~~~eL~~~~Gd~i~v~~~~~-~gWw~g~~--~g~~G~fP~~yv~~~~~  296 (304)
T 2eyz_A          237 PIYARVIQK-RVPNAYDKTALALEVGELVKVTKINV-SGQWEGEC--NGKRGHFPFTHVRLLDQ  296 (304)
T ss_dssp             CCCSCCSSC-BCCCTTCSSCCCBCTTSCCEEEEECT-TSCEEEEE--TTEEEECCCTTSCCCSS
T ss_pred             CEEEEEeee-ecCCCCCCCeecccCCCEEEEEEecC-CCeEEEEE--CCceEEechHHEEECCC
Confidence            457899999 54  4577899999999999999764 57999996  58999999999998764

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.10  E-value=6.3e-11  Score=100.85  Aligned_cols=59  Identities=19%  Similarity=0.301  Sum_probs=51.0

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ...++|+|| |.+.++++|+|++||+|.|++.. +.+||+|+.  +|+.|+||+|||+++...
T Consensus       174 ~~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~  232 (341)
T 2dyb_A          174 APRAEALFD-FTGNSKLELNFKAGDVIFLLSRI-NKDWLEGTV--RGATGIFPLSFVKILKDF  232 (341)
T ss_dssp             CCEEEESSC-BCCSSSSBCCBCTTCEEEEEEEC-SSSEEEEEE--TTEEEEEEGGGEEEEECC
T ss_pred             CcEEEEEEe-eCCCCCCcCCccCCCEEEEEEec-CCCEEEEEE--CCcEEEechHHeEEcCCC
Confidence            367999999 66788899999999999999975 468999994  689999999999987543

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.09  E-value=9e-11  Score=98.39  Aligned_cols=55  Identities=22%  Similarity=0.463  Sum_probs=48.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. +.+||+|++ .+++.|+||+|||+.
T Consensus       148 ~~~~al~d-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~-~~g~~G~~P~~yv~~  202 (308)
T 3qwy_A          148 EVVVGTFK-FTGERETDLPFEQGERLEILSKT-NQDWWEARN-ALGTTGLVPANYVQI  202 (308)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEECC-SSSEEEEEC-TTSCEEEEEGGGEEE
T ss_pred             eeEEEece-EcCCCCCcCcCCCCCEEEEEEcC-CCCeEEEEe-CCCCeeEeccccccc
Confidence            47899999 66788899999999999999976 457999997 378999999999993

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=99.08  E-value=1.3e-10  Score=101.60  Aligned_cols=64  Identities=20%  Similarity=0.363  Sum_probs=53.8

Q ss_pred             HHhhhcCCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          18 DCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        18 ~~L~~~~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +.........++|+|| |.+.++++|+|++||+|+|++.. +.+||.|+.  .|+.|+||+|||+.+.
T Consensus        23 ~~~~~~~~~~~~al~~-~~~~~~~eL~~~~gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~   86 (466)
T 2pz1_A           23 ELISDGSVVCAEALWD-HVTMDDQELGFKAGDVIEVMDAT-NREWWWGRV--ADGEGWFPASFVRLRV   86 (466)
T ss_dssp             HHHTTTCCEEEEESSC-BCCCCTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEECS
T ss_pred             cccCCCCccEEEEccc-cCCCCCCcCCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEEehhHeeecc
Confidence            3444445678999999 66788899999999999999976 467999996  5899999999999865

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.07  E-value=5.1e-11  Score=81.25  Aligned_cols=45  Identities=16%  Similarity=0.406  Sum_probs=39.7

Q ss_pred             CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        38 ~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .++++|+|++||+|.|++... .+||+|+.  +++.|+||+|||+.+.
T Consensus         3 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   47 (77)
T 2jmc_A            3 MGPREVTMKKGDILTLLNSTN-KDWWKVEV--NDRQGFVPAAYVKKLD   47 (77)
T ss_dssp             SSSCCCCCCTTCEEECCCCCC-SSCCCEEE--TTEEECCCGGGEEECC
T ss_pred             cCCCccCCCCCCEEEEEEecC-CCEEEEEE--CCcEEEEEeeEEEEcC
Confidence            467899999999999999764 57999984  7899999999999875

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.58  E-value=3e-11  Score=101.35  Aligned_cols=58  Identities=24%  Similarity=0.491  Sum_probs=50.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ..++|+|| |...++++|+|++||+|.|++.. +.+||+|++. +++.|+||+|||+++..
T Consensus       126 ~~~~alyd-y~~~~~~eLsf~~Gd~i~v~~~~-~~~Ww~~~~~-~g~~G~~P~~yv~~~~~  183 (303)
T 2lqn_A          126 EYVRTLYD-FPGNDAEDLPFKKGEILVIIEKP-EEQWWSARNK-DGRVGMIPVPYVEKLVR  183 (303)
Confidence            56899999 66788899999999999999976 4579999975 78999999999998754

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=99.00  E-value=3.9e-11  Score=106.51  Aligned_cols=57  Identities=26%  Similarity=0.487  Sum_probs=0.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|| |...++++|+|++||+|.||+...+.+||.|+.. +|+.|+||+|||+++
T Consensus       429 ~~~~alyd-y~~~~~~eLsf~~Gd~i~vl~~~~~~~Ww~g~~~-~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          429 VRVRALYD-YEGQEHDELSFKAGDELTKMEDEDEQGWCKGRLD-NGQVGLYPANYVEAI  485 (486)
T ss_dssp             -----------------------------------------------------------
T ss_pred             eEEEEccc-cCCCCCCcCccCCCCEEEEEEecCCCCeeEEEeC-CCCEEEEeHHHceeC
Confidence            45899999 6678889999999999999997655689999974 689999999999875

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=98.51  E-value=6.1e-11  Score=99.43  Aligned_cols=59  Identities=20%  Similarity=0.296  Sum_probs=48.2

Q ss_pred             CCceEEEecccC-CCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          24 TPAVMKATQNCH-EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        24 ~P~~vrAl~d~~-~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+..++|+|||- +..++++|+|++||+|+|++.. +.+||.|+.  +|++|+||+|||+.+.
T Consensus       236 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~  295 (303)
T 2lqn_A          236 GPVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMN-INGQWEGEV--NGRKGLFPFTHVKIFD  295 (303)
Confidence            357899999932 2334679999999999999875 457999985  6899999999999875

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=98.90  E-value=1.5e-10  Score=97.00  Aligned_cols=58  Identities=17%  Similarity=0.229  Sum_probs=0.0

Q ss_pred             CceEEEecccC-CCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCH-EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~-~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..++|+|+|. +..++++|+|++||+|+|++... ..||.|..  +|++|+||+|||+.+.
T Consensus       247 ~~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~-~~ww~g~~--~g~~G~fP~~yv~~~~  305 (308)
T 3qwy_A          247 PAKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMS-NGMYKAEL--DGQIGSVPHTYLRFTA  305 (308)
T ss_dssp             --------------------------------------------------------------
T ss_pred             ccccccccccccccCCcccceeCCCCEEEEEEEcC-CCcEEEEE--CCeeEEechHHeEEec
Confidence            56789999942 23445899999999999999744 47999985  6899999999998763

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=98.89  E-value=9e-10  Score=77.51  Aligned_cols=55  Identities=15%  Similarity=0.286  Sum_probs=45.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCC--CCccceecCCCe
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLS--TFNIGMFPRNIM   81 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~r--tg~~G~FP~n~V   81 (161)
                      +.+.|+|| |.+..+++|+|++||+++||+... +..||..++.-  .++.|++|+|||
T Consensus        18 e~~valyd-F~Ar~~~ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl   75 (82)
T 1u3o_A           18 ELTVVLQD-FSAAHSSELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTL   75 (82)
T ss_dssp             EEEECSSC-BCCCSTTCCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGS
T ss_pred             eEEEEEee-ecCCCCCeeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEE
Confidence            56899999 667788999999999999999642 35799999743  247799999999

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=98.85  E-value=4.7e-10  Score=94.19  Aligned_cols=56  Identities=18%  Similarity=0.427  Sum_probs=45.5

Q ss_pred             eEEEecccCCCCCCC-----CccccCCCEEEEEecCCCCCceeeecCCCC----ccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEG-----KLYIDAGDQIVIIEGDPECHWWKGQNLSTF----NIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~-----~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg----~~G~FP~n~V~p~   84 (161)
                      .++|+|| |++.+++     +|+|++||+|.|++.. +.+||+|++..++    +.|+||+|||...
T Consensus         3 ~vrAlyd-y~~~~~~~~p~~eLsf~~GDil~V~~~~-d~~WW~a~~~~~~~~~~~~G~iPsny~~e~   67 (295)
T 1kjw_A            3 YIRALFD-YDKTKDCGFLSQALSFRFGDVLHVIDAG-DEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (295)
T ss_dssp             EEEESSC-BCHHHHHCCCSSBCCBCTTCEEEEEECC-SSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEEeec-cCCCCCCCCCCcCCcCCCCCEEEEEEeC-CCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence            5899999 5454444     9999999999999975 4689999976543    8899999999753

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=98.80  E-value=6.5e-09  Score=67.71  Aligned_cols=40  Identities=15%  Similarity=0.401  Sum_probs=35.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQN   67 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn   67 (161)
                      ..++|+|| |.+.++++|+|++||+|+|++.. +..||+|+.
T Consensus        22 ~~~~alyd-y~a~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~   61 (62)
T 1g2b_A           22 ELVLALYD-YQEKSPREVTMKKGDILTLLNST-NKDWWKVEV   61 (62)
T ss_dssp             CEEEECSC-BCCSSTTBCCBCTTCEEEEEECC-SSSEEEEEE
T ss_pred             eEEEEeee-ECCCCCCccCCCCCCEEEEEEec-CCCEEEEEe
Confidence            67899999 66788899999999999999975 467999985

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=98.61  E-value=1.9e-08  Score=86.71  Aligned_cols=53  Identities=19%  Similarity=0.420  Sum_probs=42.8

Q ss_pred             ceEEEecccCCCCCCC-------CccccCCCEEEEEecCCCCCceeeecCCC-CccceecCCC
Q psy2788          26 AVMKATQNCHEIDEEG-------KLYIDAGDQIVIIEGDPECHWWKGQNLST-FNIGMFPRNI   80 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-------~L~f~~GDiI~Vid~~~e~~WW~Gqn~rt-g~~G~FP~n~   80 (161)
                      ..|+|+|| |+..+++       .|+|++||++.|++.. +.+||+|++..+ +++|+||+++
T Consensus        39 ~~vrAlfd-Y~~~~d~d~P~~e~~LsF~~GDiL~V~~~~-d~~WWqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           39 FAVRTNVS-YSAAHEDDVPVPGMAISFEAKDFLHVKEKF-NNDWWIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             EEEEESSC-BCCCGGGCCSSTTCBCCBCTTCEEEEEEEC-SSSEEEEEESSTTCCCEEEECHH
T ss_pred             EEEEEccc-cCCCCCCCCCcccccccccCCCEEEEEecC-CCCeEEEEECCCCCCccEecCHH
Confidence            47899999 5454433       4999999999999976 457999998543 7899999987

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.58  E-value=1.8e-08  Score=73.36  Aligned_cols=57  Identities=14%  Similarity=0.054  Sum_probs=44.3

Q ss_pred             ceEEEecccC--CCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCH--EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~--~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..|+|+++ |  ......+|.|++|+++.||+... ..||.++|. .|+.|+.|.+||.++.
T Consensus        40 ~~~~a~~~-f~~~k~g~~DLpfkkGE~LeVI~~~e-~~wwLcRNs-~GkyGyVP~~yl~~~d   98 (102)
T 1ri9_A           40 YSTKVTTS-ITSKKWGTRDLQVKPGESLEVIQTTD-DTKVLCRNE-EGKYGYVLRSYLADND   98 (102)
T ss_dssp             SCCBCCTT-SCSSCCCTTBCCCCTTCBCEEEEESS-SSEEEEEET-TTEEEEEEGGGSCC--
T ss_pred             EEEEEeec-cccccCCcccCCcCCCCEEEEEEeCC-CCEEEEECC-CCCCCceeHHHhcccc
Confidence            34566666 3  12234699999999999999775 589999996 7999999999998753

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.49  E-value=1.1e-07  Score=74.50  Aligned_cols=59  Identities=27%  Similarity=0.456  Sum_probs=47.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCC--CceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPEC--HWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~--~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..+.++++ |....+.+|.|+.||+|+|+++..+.  .||.|+.  .++.|+||.+||+.+++.
T Consensus       171 ~~~~al~d-~~~~~~~eLa~~~G~~i~vl~~~~~~~~~Ww~~~~--~~~~G~~P~~yv~~~~~~  231 (239)
T 1ycs_B          171 GVIYALWD-YEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARL--NDKEGYVPRNLLGLYPRI  231 (239)
T ss_dssp             GEEEESSC-BCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEE--TTEEEEEEGGGEECCC--
T ss_pred             ceEEEEec-cCCCCCCcccccCCCEEEEEEecCCCCCCEEEEEE--CCcEEEeehHHeeECCcC
Confidence            46789998 55677889999999999999876532  4999995  689999999999987643

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.42  E-value=7.6e-07  Score=63.66  Aligned_cols=66  Identities=18%  Similarity=0.373  Sum_probs=47.4

Q ss_pred             HHhhhcCCc-eEEEecccCCCCCCCCccccCCCEEEEEecC----CCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          18 DCLYRLTPA-VMKATQNCHEIDEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        18 ~~L~~~~P~-~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~----~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      .+|.+-.|+ ..++..+ +...+.-+|.|++||+|.||.+.    +..-|| -.+  .++.|++|++|++|+.+.
T Consensus         9 ~L~~~y~~~~LY~~t~~-~~~tq~~dl~l~~GdlVAVl~k~Dp~Gn~srW~-Vdt--gg~~GyvPs~yLe~~~~~   79 (92)
T 1ug1_A            9 SLLARYPPEKLFQAERN-FNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWL-IDN--GVTKGFVYSSFLKPYNPR   79 (92)
T ss_dssp             HHHHHSCGGGEEEESSC-CCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEE-EEC--SSSEEEEEGGGEEECCCC
T ss_pred             HHHhhCCchheEEeccC-cCCCCceeeeecCCCEEEEEecCCCCCCCcceE-EEC--CCcEEeeEhhhceEcccC
Confidence            345554544 4566676 44556679999999999999875    334456 433  689999999999998643

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=98.38  E-value=2.9e-07  Score=66.38  Aligned_cols=55  Identities=20%  Similarity=0.239  Sum_probs=45.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCC-CCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPE-CHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e-~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..++|+++ . .....+|.|++|+++.||+.... ..||.++|. .|+.|+.|.+||+-
T Consensus        29 ~~a~a~~~-~-k~g~~dLp~~~GE~LeII~~~e~p~g~Wl~RN~-~G~~GyVp~~~v~v   84 (96)
T 2gtj_A           29 HLAKACCD-V-KGGKNELSFKQGEQIEIIRITDNPEGKWLGRTA-RGSYGYIKTTAVEI   84 (96)
T ss_dssp             EEEEESSC-E-ECTTSCCEECTTCCEEEEECTTCSSSCCEEECT-TCCBCCCCGGGEEE
T ss_pred             EEEEEeec-C-CCCcccCCcCCCCEEEEEEccCCCCCeEEEECC-CCCCCccchhhEEE
Confidence            36778887 2 23557999999999999997642 569999995 79999999999986

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=98.30  E-value=2.8e-07  Score=80.06  Aligned_cols=57  Identities=11%  Similarity=0.172  Sum_probs=45.9

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCCC----ccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTF----NIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rtg----~~G~FP~n~V~p   83 (161)
                      -.++|++| |+..++.+|+|++||++.|++..  .+.+||+++...+.    +.|+||++|+..
T Consensus       107 ~~vral~d-y~~~~~~~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e  169 (391)
T 3tsz_A          107 FYIRTHFE-YEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  169 (391)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHH
T ss_pred             cccccccc-cCCCCCCcceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHH
Confidence            46889999 56677789999999999999973  34579999864332    589999999874

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=98.25  E-value=6.5e-07  Score=82.86  Aligned_cols=57  Identities=18%  Similarity=0.382  Sum_probs=45.7

Q ss_pred             ceEEEecccCCCCCCCC-----ccccCCCEEEEEecCCCCCceeeecCCC----CccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGK-----LYIDAGDQIVIIEGDPECHWWKGQNLST----FNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~-----L~f~~GDiI~Vid~~~e~~WW~Gqn~rt----g~~G~FP~n~V~p~   84 (161)
                      ..++|+|| |+...+++     |+|++||++.|++... .+||++++..+    ++.|+||++|+...
T Consensus       428 ~~vrAl~d-y~~~~d~~~p~~~LsF~~GDil~v~~~~~-~~WW~a~~~~~~~~~~~~G~iPs~~~~e~  493 (721)
T 2xkx_A          428 FYIRALFD-YDKTKDCGFLSQALSFRFGDVLHVIDAGD-EEWWQARRVHSDSETDDIGFIPSKRRVER  493 (721)
T ss_pred             eeEEEeec-cCcCCCCCCccccccccCCCEEEEeecCC-CCeEEEEECCCCCccCccceeecHHHHHH
Confidence            46899999 65666666     9999999999999764 57999986532    46799999999653

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=98.21  E-value=5.2e-07  Score=76.72  Aligned_cols=57  Identities=12%  Similarity=0.174  Sum_probs=44.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCC--------CceeeecC----CCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPEC--------HWWKGQNL----STFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~--------~WW~Gqn~----rtg~~G~FP~n~V~p   83 (161)
                      -+|||+|| |+...+++|+|++||++.|++...++        +||.+++.    ++.+.|++|.+|+..
T Consensus         5 fyVRalfd-y~~~~~~eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            5 FYIRTHFE-LEPSPPSGLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             EEEEECSC-BCCCSSSBCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             EEEEEecC-cCCCCcccCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence            47899999 67778899999999999999965432        49999864    234789999998863

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=98.17  E-value=1e-06  Score=78.66  Aligned_cols=57  Identities=11%  Similarity=0.190  Sum_probs=46.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeecCCC-C---ccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLST-F---NIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn~rt-g---~~G~FP~n~V~p   83 (161)
                      ..++|+++ |+..++.+|+|++||++.|++..  .+.+||+++...+ +   +.|+||++|+..
T Consensus        99 ~yVralfd-y~~~~~~~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e  161 (468)
T 3shw_A           99 FYIRTHFE-YEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAE  161 (468)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHH
T ss_pred             cccccccC-cCCCCCCCceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHH
Confidence            46889999 66777889999999999999963  3457999986432 3   689999999864

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=97.91  E-value=6.2e-06  Score=63.19  Aligned_cols=54  Identities=31%  Similarity=0.625  Sum_probs=46.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      +.++|+|+ |....+.+|.|+.||++.|++.. +..||.+..  .++.|+||.+||..
T Consensus        15 ~~~~al~d-~~~~~~~el~~~~Gd~~~v~~~~-~~~w~~~~~--~g~~gl~p~~~v~~   68 (222)
T 3ehr_A           15 KVFRALYT-FEPRTPDELYIEEGDIIYITDMS-DTNWWKGTS--KGRTGLIPSNYVAE   68 (222)
T ss_dssp             EEEEESSC-CCCSSTTBCCCCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEHHHHHH
T ss_pred             eEEEEeCC-cCCCCCCcccccCCCEEEEeccc-cchhHhccc--CCcceeechhhccc
Confidence            57899998 66778899999999999999965 568999985  57899999999864

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=97.90  E-value=1.1e-05  Score=67.74  Aligned_cols=52  Identities=17%  Similarity=0.471  Sum_probs=35.1

Q ss_pred             ceEEEecccCCCCCCC-----CccccCCCEEEEEecCCCCCceeeecC----CCCccceecCC
Q psy2788          26 AVMKATQNCHEIDEEG-----KLYIDAGDQIVIIEGDPECHWWKGQNL----STFNIGMFPRN   79 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-----~L~f~~GDiI~Vid~~~e~~WW~Gqn~----rtg~~G~FP~n   79 (161)
                      -.|||++| |+..+++     .|+|++||++-|++.. +.+||+++..    ...+.|++|+.
T Consensus         6 ~yvRa~fd-Y~~~~D~~~P~~gL~F~~gDiL~V~~~~-d~~wWqA~~v~~~~~~~~~GlIPS~   66 (292)
T 3tvt_A            6 LYVRALFD-YDPNRDDGLPSRGLPFKHGDILHVTNAS-DDEWWQARRVLGDNEDEQIGIVPSK   66 (292)
T ss_dssp             CEEEECSC-BCC---------CCCBCTTCEEEEEECC-SSSEEEECCCCC--------EEECH
T ss_pred             EEEEEecc-CCCCCCCCCCCCcCCcCCCCEEEEeecC-CCCeEEEEEeCCCCCccceeEEeCh
Confidence            58999999 4444332     5999999999999965 4689999852    24458999985

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.71  E-value=2.3e-06  Score=72.64  Aligned_cols=43  Identities=14%  Similarity=0.155  Sum_probs=34.1

Q ss_pred             CCccc--cCCCEEEEEecCCCCCceeeec-CCCCccceecCC-Ceeec
Q psy2788          41 GKLYI--DAGDQIVIIEGDPECHWWKGQN-LSTFNIGMFPRN-IMDPM   84 (161)
Q Consensus        41 ~~L~f--~~GDiI~Vid~~~e~~WW~Gqn-~rtg~~G~FP~n-~V~p~   84 (161)
                      .+|.|  .+||+|+|++.. +.+||.|.. .+.|++|+||.+ +|+-.
T Consensus       285 ~eL~~~~~~GD~I~v~~~~-d~gWw~Ge~~g~~G~~glfP~~~~v~~~  331 (341)
T 2dyb_A          285 IALNYRDAEGDLVRLLSDE-DVALMVRQARGLPSQKRLFPWKLHITQK  331 (341)
T ss_dssp             EEEEEECSSSCEEECCSHH-HHHHHHHHHTTSCCBTTBCSSCEEEEEC
T ss_pred             ccccCCCCCCCEEEEeeec-CCCEeEEEECCCCCCCceecceeEEEec
Confidence            45555  899999999975 457999974 457999999998 77654

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=97.43  E-value=0.00012  Score=60.85  Aligned_cols=55  Identities=11%  Similarity=0.085  Sum_probs=42.7

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .|..|+|+|||    .+.++.|.+||++++++.+. ..||+-++. +|+.|++|++|+...
T Consensus       197 ~~~~v~al~dy----~~~e~~~~kge~~~l~~~s~-~~wW~v~~~-~G~~g~vPs~~~~ip  251 (283)
T 3pe0_A          197 GRLPLLAVCDY----KQVEVTVHKGDECQLVGPAQ-PSHWKVLSS-SGSEAAVPSVCFLVP  251 (283)
T ss_dssp             SCEEEEECSCE----ECSSCEECTTCEEEEEEECS-TTEEEEECC----EEEEEGGGEECC
T ss_pred             CCceEEeecCc----cCCcccccCCCEEEEeeCCC-CCceEEEcC-CCCEeeccceEEeeC
Confidence            35789999993    23579999999999999764 469999984 789999999998753

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=96.74  E-value=9.2e-05  Score=65.11  Aligned_cols=65  Identities=9%  Similarity=-0.067  Sum_probs=42.0

Q ss_pred             CCCCceeeecCCCCccceecCCCeeecCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCccccCCCCCCccccCCc
Q psy2788          58 PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT  137 (161)
Q Consensus        58 ~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtghg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~  137 (161)
                      .+.+||++++.++++.|++|+|||.+..     .                 ....|    + .+.++-+.|.+   -.++
T Consensus        15 ~~~~ww~~~~~~~~~~g~~P~~~v~~~~-----~-----------------~~~~w----y-~~~w~hg~i~r---~~ae   64 (463)
T 3cxl_A           15 YFQGVWKSYLYQLQQEAPHPRRITCTCE-----V-----------------ENRPK----Y-YGREFHGMISR---EAAD   64 (463)
T ss_dssp             ---CCSCCHHHHHHHHSCCCEECCCCCC-----C-----------------TTCCT----T-CCTTBCCSCCH---HHHH
T ss_pred             CCCCEEEEEecCcCccCCCCcCccCCcc-----c-----------------cCCCC----c-cccccccCCCH---HHHH
Confidence            3567999998878899999999998642     1                 01233    0 01125777877   3444


Q ss_pred             --cccCCCCCeeEeeehh
Q psy2788         138 --TQGSQNGGATVAHRST  153 (161)
Q Consensus       138 --l~~~~ng~~~~~~r~~  153 (161)
                        |.+ ++|+||||..++
T Consensus        65 ~lL~~-~~G~FLvR~S~~   81 (463)
T 3cxl_A           65 QLLIV-AEGSYLIRESQR   81 (463)
T ss_dssp             HHHTT-STTEEEEEECSS
T ss_pred             HHHcC-CCCeEEEeccCC
Confidence              433 689999998765

>2y3a_B Phosphatidylinositol 3-kinase regulatory subunit; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}

Probab=96.65  E-value=3.5e-06  Score=71.48  Aligned_cols=100  Identities=13%  Similarity=0.148  Sum_probs=47.8

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEE---Ee------------cCCCCCceeeecCCCCccceecC--CCeeecCCCCC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVI---IE------------GDPECHWWKGQNLSTFNIGMFPR--NIMDPMRRKQP   89 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~V---id------------~~~e~~WW~Gqn~rtg~~G~FP~--n~V~p~~~~~~   89 (161)
                      .++||++ |.....++|+|++||+..|   +.            ......||++++.++++++.|+.  |++.+......
T Consensus       105 rl~aL~~-~~~~~~~eLsf~kgd~~~ier~ln~~~pdw~~l~k~rd~~~~wl~~~gl~~~~~~~~~~~~~~~~~~~~l~~  183 (302)
T 2y3a_B          105 RIAEIHE-SRTKLEQDLRAQASDNREIDKRMNSLKPDLMQLRKIRDQYLVWLTQKGARQRKINEWLGIKNETEDQYSLME  183 (302)
T ss_dssp             HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCSCC----------------------------
T ss_pred             HHHHHHh-hhhcchhhhhhhhhHHHhHHhhhccCChHHHHHhhcccchhHHHHhcCCCcccccccccccCCCCCcccccc
Confidence            5678998 4445557999999999988   31            12346799999888999888884  55543211000


Q ss_pred             CCccccccccccccCCCCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCeeEeee
Q psy2788          90 DDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGATVAHR  151 (161)
Q Consensus        90 ~~IS~P~~~S~ihtghg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r  151 (161)
                       ....+.          ......|          +.++|.+   -.|+  |.+..+|+||||..
T Consensus       184 -~~~~~~----------~l~~~~W----------yhG~IsR---~eAE~lL~~~~~GtFLVR~S  223 (302)
T 2y3a_B          184 -DEDALP----------HHEERTW----------YVGKINR---TQAEEMLSGKRDGTFLIRES  223 (302)
T ss_dssp             -----CG----------GGSSTTT----------BCCSCCH---HHHHHHHTTSCTTBEEBCCC
T ss_pred             -cccccc----------cccCCCc----------cCCCCCH---HHHHHHhcCCCCCcEEEEec
Confidence             000000          0012455          7888887   3344  77789999999976

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=96.17  E-value=0.0033  Score=55.64  Aligned_cols=54  Identities=11%  Similarity=0.171  Sum_probs=45.2

Q ss_pred             CCceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          24 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      +|..|+|++| |.   .+++++.+||+.++++.+. ..||+=++ .+|..|++|+.|+..
T Consensus       282 ~~~~V~alcd-y~---~~e~~i~kge~~~L~~ns~-~~~W~V~~-~~G~~~~vPavcf~i  335 (450)
T 3r6n_A          282 KPIILRALCD-YK---QDQKIVHKGDECILKDNNE-RSKWYVTG-PGGVDMLVPSVGLII  335 (450)
T ss_dssp             SCCEEEESSC-EE---ETTEEECTTCEEEEEECSS-SSEEEEEC-SSSCCEEEEGGGEEC
T ss_pred             CCceEEEecc-cc---CCeeeEecCCEEEEecCCC-CCceEEec-CCCCeeccceeEEec
Confidence            4678999999 32   4789999999999999764 57999886 478999999998764

>2eo3_A CRK-like protein; phosphorylation, repeat, SH2 domain, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.57  E-value=0.0011  Score=47.44  Aligned_cols=46  Identities=24%  Similarity=0.299  Sum_probs=33.8

Q ss_pred             CCccceecCCCeeecCCCCCCCccccccccccccCCCCCCCCCCCCCCCCCccccCCCCCCccccCCc--cccCCCCCee
Q psy2788          70 TFNIGMFPRNIMDPMRRKQPDDISRPLRNSVIHTGHGDPWGKSWGSPSHIDPMYLNNPMDPPDILGLT--TQGSQNGGAT  147 (161)
Q Consensus        70 tg~~G~FP~n~V~p~~~~~~~~IS~P~~~S~ihtghg~~~g~~wG~p~~idd~y~~~Pm~pp~~~~~~--l~~~~ng~~~  147 (161)
                      +++.|++|+|||....                         ..|          +-++|.+   ..|+  |.+..+|+||
T Consensus         3 ~g~~G~ip~n~v~~~~-------------------------~~W----------yhg~isR---~~Ae~lL~~~~~G~FL   44 (111)
T 2eo3_A            3 SGSSGMSSARFDSSDR-------------------------SAW----------YMGPVSR---QEAQTRLQGQRHGMFL   44 (111)
T ss_dssp             CCCCCSCSCCCCTTCH-------------------------HHH----------EEESCCH---HHHHHHHSSCCTTCEE
T ss_pred             CCccccccccccccCC-------------------------CCc----------ccCCCCH---HHHHHHhcCCCCceEE
Confidence            6788999999975421                         345          6777876   3333  6677999999


Q ss_pred             Eeeehh
Q psy2788         148 VAHRST  153 (161)
Q Consensus       148 ~~~r~~  153 (161)
                      ||..++
T Consensus        45 VR~S~~   50 (111)
T 2eo3_A           45 VRDSST   50 (111)
T ss_dssp             EEECSS
T ss_pred             EEeecC
Confidence            998765

>2crh_A VAV proto-oncogene; oncoprotein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2ror_A* 2lct_A*

Probab=90.68  E-value=0.098  Score=38.70  Aligned_cols=28  Identities=21%  Similarity=0.375  Sum_probs=20.8

Q ss_pred             cCCCCCCccccCCc--cccCCCCCeeEeeehhH
Q psy2788         124 LNNPMDPPDILGLT--TQGSQNGGATVAHRSTE  154 (161)
Q Consensus       124 ~~~Pm~pp~~~~~~--l~~~~ng~~~~~~r~~~  154 (161)
                      +.+.|.+   ..++  |....+|+||||..++.
T Consensus        29 yhG~isR---~eAe~lL~~~~~G~FLVR~S~~~   58 (138)
T 2crh_A           29 YAGPMER---AGAESILANRSDGTFLVRQRVKD   58 (138)
T ss_dssp             BCCSCCH---HHHHHHTTTSCTTEEEEECCSST
T ss_pred             ccCCCCH---HHHHHHhcCCCCCEEEEEECCCC
Confidence            6778887   3444  77778999999987653

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=88.61  E-value=0.26  Score=33.90  Aligned_cols=18  Identities=22%  Similarity=0.300  Sum_probs=15.1

Q ss_pred             CCCccceecCCCeeecCC
Q psy2788          69 STFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        69 rtg~~G~FP~n~V~p~~~   86 (161)
                      .+++.|+||++||+.+..
T Consensus         5 ~~g~~G~fP~~~v~~~~~   22 (98)
T 1udl_A            5 SSGQKGWFPASHVKLLGP   22 (98)
T ss_dssp             CSSCCSSCCCCCCCCCSC
T ss_pred             CCCCEeEEEhhhEEEcCC
Confidence            468999999999997653

>2dly_A FYN-related kinase; BRK family kinase, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=86.61  E-value=0.17  Score=36.26  Aligned_cols=27  Identities=7%  Similarity=0.096  Sum_probs=19.2

Q ss_pred             cCCCCCCccccCCc--cc--cCCCCCeeEeeehh
Q psy2788         124 LNNPMDPPDILGLT--TQ--GSQNGGATVAHRST  153 (161)
Q Consensus       124 ~~~Pm~pp~~~~~~--l~--~~~ng~~~~~~r~~  153 (161)
                      +-+.|.+   -.++  |.  ...+|+||||..++
T Consensus        19 yhG~isR---~eAe~lL~~~~~~~G~FLVR~S~~   49 (121)
T 2dly_A           19 FFGAIKR---ADAEKQLLYSENQTGAFLIRESES   49 (121)
T ss_dssp             BCSSCCH---HHHHHHHTSSSCCTTCEEEEECSS
T ss_pred             cccCCCH---HHHHHHHhcCCCCCCEEEEEcCCC
Confidence            7788887   3444  43  35789999998754

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=84.87  E-value=0.25  Score=31.04  Aligned_cols=15  Identities=13%  Similarity=0.273  Sum_probs=13.0

Q ss_pred             CccceecCCCeeecC
Q psy2788          71 FNIGMFPRNIMDPMR   85 (161)
Q Consensus        71 g~~G~FP~n~V~p~~   85 (161)
                      |+.|+||++||++..
T Consensus         2 g~~G~~P~~yv~~~~   16 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLD   16 (62)
T ss_dssp             CEEEEEEGGGEEECC
T ss_pred             CCccccccceEeecC
Confidence            567999999999875

>2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1

Probab=84.21  E-value=2.5  Score=29.07  Aligned_cols=54  Identities=11%  Similarity=0.140  Sum_probs=37.8

Q ss_pred             ChhhhHHHhhhcC---CceEEEecccCC---CCCCCCccccCCCEEEEEecCCCCCceee
Q psy2788          12 KFSTLKDCLYRLT---PAVMKATQNCHE---IDEEGKLYIDAGDQIVIIEGDPECHWWKG   65 (161)
Q Consensus        12 ~F~~l~~~L~~~~---P~~vrAl~d~~~---~~e~~~L~f~~GDiI~Vid~~~e~~WW~G   65 (161)
                      +|..|++...+..   +..+|-++|--.   ..-|.+|.++-||+|.|+-....+.||.-
T Consensus        27 ~l~kl~~~y~~~~gi~~~~~rf~FdG~~l~~~~Tp~dl~medgD~Idv~~~q~gg~~~~~   86 (91)
T 2io0_B           27 PLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVYLEH   86 (91)
T ss_dssp             CTHHHHHHHHHHTTCCSTTEEEEETTEECCTTCCTTTTTCCTTEEEEEEECCCCCCCCCC
T ss_pred             hHHHHHHHHHHHhCCCcccEEEEECCEEcCCCCCHHHcCCCCCCEEEEEEeccCCccccc
Confidence            4566666665543   577888887211   13457899999999999987766778864

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=82.41  E-value=2.2  Score=27.90  Aligned_cols=39  Identities=13%  Similarity=0.198  Sum_probs=31.9

Q ss_pred             ccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          43 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        43 L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      -.+..|+.|+|++..  ..|++=+..  +..|+..+.|+....
T Consensus        25 ~~l~~G~~v~v~~~~--~~W~kV~~~--g~~GwV~~~yl~~~~   63 (74)
T 2krs_A           25 GTLRNNDKVEIIKEV--DGWYEIRFN--GKVGYASKSYITIVN   63 (74)
T ss_dssp             EEEETTCEEEEEEEE--TTEEEEEET--TEEEEECSSSEEESS
T ss_pred             EEECCCCEEEEEEEe--CCEEEEEEC--CeEEEEEhHHcCCCC
Confidence            467899999999965  358887753  889999999998765

>2ecd_A Tyrosine-protein kinase ABL2; SH2 domain, phosphotyrosine binding domain, protein tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=80.56  E-value=0.37  Score=34.44  Aligned_cols=30  Identities=17%  Similarity=0.161  Sum_probs=21.2

Q ss_pred             cCCCCCCccccCCccccCCCCCeeEeeehhH
Q psy2788         124 LNNPMDPPDILGLTTQGSQNGGATVAHRSTE  154 (161)
Q Consensus       124 ~~~Pm~pp~~~~~~l~~~~ng~~~~~~r~~~  154 (161)
                      +-+.|.+-++-.+ |.+..+|+||||..++.
T Consensus        19 yhG~isR~~Ae~l-L~~~~~G~FLVR~S~~~   48 (119)
T 2ecd_A           19 YHGPVSRSAAEYL-LSSLINGSFLVRESESS   48 (119)
T ss_dssp             EEEECCHHHHHHH-HHTSCTTBEEEEEESSS
T ss_pred             ccCCCCHHHHHHH-hcCCCCCeEEEEeCCCC
Confidence            7778887333222 77778999999987653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	161
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	2e-09
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	1e-06
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	1e-06
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	3e-06
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	4e-06
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	2e-05
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	2e-05
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	3e-05
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	3e-05
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	3e-05
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	6e-05
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	6e-05
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	6e-05
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	9e-05
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	9e-05
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	1e-04
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	1e-04
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	2e-04
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	4e-04
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	5e-04
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	5e-04
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	6e-04
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	7e-04
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	8e-04
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	0.002
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	0.002
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	0.003
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	0.003
d1phta_	83	b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-a	0.003

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.1 bits (117), Expect = 2e-09
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)

Query: 8  AERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQN 67
          +  PK    ++  Y   P                 L ++ GD + + + + E +WW+G+N
Sbjct: 2  SHMPKMEVFQE--YYGIPP--------PPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRN 51

Query: 68 LSTFNIGMFPRNIMDPM 84
           +T  +G FP N + P 
Sbjct: 52 TATNEVGWFPCNRVHPY 68

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 1e-06
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
            E  L    G+++ I+       WW   +LST   G  P N + P 
Sbjct: 14 RTETDLSFKKGERLQIVNNTEG-DWWLAHSLSTGQTGYIPSNYVAPS 59

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
            E  L    G++  I+       WW+ ++L+T   G  P N + P+
Sbjct: 12 ITEDDLSFHKGEKFQILNSSEG-DWWEARSLTTGETGYIPSNYVAPV 57

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           +  ++    GD I+ ++   E  W  G    T   GM P N
Sbjct: 15 ADADEVSFKDGDAIINVQAIDEG-WMYGTVQRTGRTGMLPAN 55

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.1 bits (94), Expect = 4e-06
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E+ +L     D+I+ IE   +  WW G+     + G+FP N
Sbjct: 12 AEDNELTFVENDKIINIEFVDD-DWWLGELEKDGSKGLFPSN 52

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 2e-05
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD 90
           E   L ++ G + +I+E   + HWW+ ++    + G  P N +   +    D
Sbjct: 14 TEAHDLRLERGQEYIILE-KNDLHWWRARDKYG-SEGYIPSNYVTGKKSNNLD 64

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            + +L    GD + ++  + + +W+K +       G  P+N
Sbjct: 12 TADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKN 51

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 3e-05
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
               L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 16 IHHEDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 55

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 3e-05
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            +G L  + G+Q+ I+E   E  WWK Q+L+T   G  P N
Sbjct: 18 SHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFN 57

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.4 bits (87), Expect = 3e-05
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
            +  L I  G+++ ++  +    W + Q       G  P N + P+
Sbjct: 12 SGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSNYITPV 56

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.8 bits (85), Expect = 6e-05
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           ++ ++ I  GD+I ++  D    W K  N +T   G+ P  
Sbjct: 11 KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTT 52

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 6e-05
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
               L +  GD+  I+E +    WW+ ++ +    G  P N
Sbjct: 20 MNANDLQLRKGDEYFILE-ESNLPWWRARDKNG-QEGYIPSN 59

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.1 bits (86), Expect = 6e-05
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          + +  L    GD + ++  + +  W  G++ +T   G FP +
Sbjct: 20 NNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSS 61

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (85), Expect = 9e-05
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
            E  L    GD + I+    + +W+K +N      G+ P N
Sbjct: 18 TAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPAN 58

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 9e-05
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          ++E  L    GD + I +   E  WW  ++      GM P  
Sbjct: 13 NDEEDLPFKKGDILRIRDKPEE-QWWNAEDSEG-KRGMIPVP 52

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 84
           EE +L   +G+ + +++      WW G+      +G+FP N + PM
Sbjct: 13 LEEDELGFRSGEVVEVLD-SSNPSWWTGRL--HNKLGLFPANYVAPM 56

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 35.8 bits (83), Expect = 1e-04
 Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 3/42 (7%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
              ++ +  GD + ++       WWK +       G  P  
Sbjct: 12 KSPREVTMKKGDILTLLN-STNKDWWKVEV--NDRQGFVPAA 50

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 2e-04
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPEC-HWWKGQNLSTFNIGMFPRNIMDPM 84
            E +L  + G+ + +IE       WWK +N     +G+ P+N +  +
Sbjct: 18 VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVL 64

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 4e-04
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISR 94
            E +L       I  +E   E  WW+G          FP N ++ M    P+ I R
Sbjct: 18 QREDELTFIKSAIIQNVE-KQEGGWWRGD-YGGKKQLWFPSNYVEEM--VNPEGIHR 70

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 5e-04
 Identities = 9/62 (14%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPLR 97
           E  ++ +  G+ + +I    +  WW  +       G FP   +    +       +  R
Sbjct: 26 VEGDEVSLLEGEAVEVIHKLLD-GWWVIRK--DDVTGYFPSMYLQKSGQDVSQAQRQIKR 82

Query: 98 NS 99
           +
Sbjct: 83 GA 84

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 83
           +   L    GD I+++       W +G++     +G+FP+  ++ 
Sbjct: 17 TQPEDLEFQEGDIILVLS-KVNEEWLEGES--KGKVGIFPKVFVED 59

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.4 bits (79), Expect = 6e-04
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 38 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRN 79
          +E G L    GD I I++  D +  WW G+       G+FP N
Sbjct: 13 EESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPAN 53

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 7e-04
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 4/44 (9%)

Query: 38 DEEGKLYIDAGDQIVIIE--GDPECHWWKGQNLSTFNIGMFPRN 79
            + +L +  GD + II    + E  WW  +       G  PRN
Sbjct: 16 QNDDELPMKEGDCMTIIHREDEDEIEWWWARL--NDKEGYVPRN 57

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.4 bits (79), Expect = 8e-04
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRP 95
            E +L +  GD I +     E  WW+G        G FP N +  +   +  + S P
Sbjct: 22 TNEDELSVCKGDIIYVTR-VEEGGWWEGTL--NGRTGWFPSNYVREI---KSSERSGP 73

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           E+ +L    G+ I +++     +WW+G+N      G+FP N
Sbjct: 14 VEDNELTFKHGELITVLDDSDA-NWWQGEN--HRGTGLFPSN 52

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.9 bits (75), Expect = 0.002
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
           ++  L     D I ++E     +WW G+       G FP++
Sbjct: 22 KKDNHLNFSKHDIITVLEQQE--NWWFGEV--HGGRGWFPKS 59

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 8/42 (19%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 79
          ++  +L +   ++  +++   E HWW+ Q+    + G  P +
Sbjct: 10 NDPQELALRCDEEYYLLD-SSEIHWWRVQD-KNGHEGYAPSS 49

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.003
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 3/59 (5%)

Query: 38 DEEGKLYIDAGDQIVIIEGDPECH-WWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRP 95
              ++  ++GD I + E       W  G      N G FP N ++ M   + +    P
Sbjct: 17 RNHDEMSFNSGDIIQVDEKTVGEPGWLYGSF--QGNFGWFPCNYVEKMPSSENEKAVSP 73

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 14/66 (21%)

Query: 38 DEEGKLYIDAGDQIVIIEG--------------DPECHWWKGQNLSTFNIGMFPRNIMDP 83
          + E  + +  GD + + +G                E  W  G N +T   G FP   ++ 
Sbjct: 15 EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEY 74

Query: 84 MRRKQP 89
          + RK+ 
Sbjct: 75 IGRKKI 80

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.74
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.65
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.64
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.62
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.62
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.62
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.62
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.61
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.61
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.59
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.59
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.59
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.59
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.58
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.58
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.58
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.57
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.57
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.57
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.57
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.57
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.56
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.56
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.56
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.55
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.54
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.54
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.54
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.54
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.53
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.53
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.53
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.53
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.51
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.51
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.5
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.5
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.49
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.49
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.48
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.48
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.48
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.47
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.42
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.4
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.4
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.23
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	98.99
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	95.38
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	87.35

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=1e-18  Score=117.74  Aligned_cols=59  Identities=29%  Similarity=0.555  Sum_probs=51.6

Q ss_pred             ceEEEecccCCC-----CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEI-----DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~-----~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ++++|+++|+..     .++++|+|++||+|+|++...+..||+|++.+++++|+||+|||+|.
T Consensus         5 Pk~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             CEEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CcEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            478999997543     45689999999999999977667899999989999999999999996

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.65  E-value=8.3e-17  Score=104.28  Aligned_cols=57  Identities=25%  Similarity=0.352  Sum_probs=51.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +.++|+|+ |.++++++|+|++||+|.|++... .+||.|++.++++.|+||+|||+.+
T Consensus         1 P~~~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           1 PWATAEYD-YDAAEDNELTFVENDKIINIEFVD-DDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CCEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CEEEEccC-CCCCCcCCcCCCCCCEEEEEEEcC-CCEEEEEECCCCCEEEEchHHEEEc
Confidence            46899999 668888999999999999999765 5799999988999999999999875

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.64  E-value=8.2e-17  Score=108.64  Aligned_cols=59  Identities=19%  Similarity=0.319  Sum_probs=50.9

Q ss_pred             ceEEEecccCCC-CCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEI-DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~-~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..|+|+|+ |.+ .++++|+|++||+|+|++...+..||.|++.+++++|+||+|||+.+.
T Consensus         8 ~~~~Alyd-y~~~~~~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~   67 (72)
T d1spka_           8 QKVKTIFP-HTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLS   67 (72)
T ss_dssp             CEEECSSC-BCCSSCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECS
T ss_pred             CEEEEeec-cCCCCCCCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECC
Confidence            57899999 545 356789999999999997665567999998889999999999999875

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2e-16  Score=101.97  Aligned_cols=54  Identities=33%  Similarity=0.679  Sum_probs=48.4

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|+++ |.+.++++|+|++||+|.|++... .+||+|++  +++.|+||+|||+|+
T Consensus         3 yv~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           3 YVQALFD-FDPQEDGELGFRRGDFIHVMDNSD-PNWWKGAC--HGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             EEEECcC-CCcCCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCeEEEEEHhHEEEC
Confidence            6899999 668888999999999999999764 57999997  589999999999985

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=2.2e-16  Score=102.19  Aligned_cols=55  Identities=27%  Similarity=0.590  Sum_probs=49.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      +.++|+|| |.++++++|+|++||+|.|++... .+||.|++  +++.|+||+|||+|+
T Consensus         2 ~yarAlyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yve~i   56 (57)
T d1utia_           2 RWARALYD-FEALEEDELGFRSGEVVEVLDSSN-PSWWTGRL--HNKLGLFPANYVAPM   56 (57)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             EEEEECcC-CCCCCcCCcCCCCCCEEEEeEEcC-CCEEEEEE--CCcEEEEEHHHEEEc
Confidence            47899999 668888999999999999999665 57999996  689999999999986

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=2.5e-16  Score=101.90  Aligned_cols=55  Identities=20%  Similarity=0.395  Sum_probs=48.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      +.|+|++| |.++++++|+|++||+|.|++... .+||.|++. +|+.|+||+|||++
T Consensus         2 ~~v~Alyd-y~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~-~g~~G~vP~~yve~   56 (57)
T d1ckaa_           2 EYVRALFD-FNGNDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEK   56 (57)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-SSEEEEECT-TSCEEEEEGGGEEC
T ss_pred             CEEEECCC-CCcCCcCCcCCCCCCEEEEEEEcC-CCeEEEEEC-CCCEEEEcHHHeEE
Confidence            46899999 678888999999999999999664 589999985 68999999999987

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=2.9e-16  Score=101.06  Aligned_cols=56  Identities=25%  Similarity=0.525  Sum_probs=50.3

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|++| |.++++++|+|++||+|.|++... ..||.+++.++++.|+||+|||+|+
T Consensus         2 l~vAl~d-y~a~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_           2 LFVALYD-YEAITEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             EEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-CSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEECCC-CCCCCcCCcCCCCCCEEEEEEecC-CCCEEEEECCCCCEEEEeHHHeEEC
Confidence            4689999 768889999999999999999765 4799999988999999999999985

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=1.2e-16  Score=104.19  Aligned_cols=57  Identities=19%  Similarity=0.362  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..+||+|| |.+.++++|+|++||+|.|++... ..||.|++.++++.|+||+|||+++
T Consensus         4 ~~~rAl~d-f~~~~~~eLs~~~Gd~i~v~~~~~-~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           4 KIFRAMYD-YMAADADEVSFKDGDAIINVQAID-EGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCEECCSC-CCCSSSSBCCCCTTCEECCSEECS-SSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             cEEEECcc-CCCCCCCCcCCCCCCEEEEEEEcC-CCEEEEEECCCCCEEEEcHHHEEEC
Confidence            46899999 667888999999999999999764 5799999988999999999999874

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.61  E-value=4e-16  Score=101.31  Aligned_cols=56  Identities=32%  Similarity=0.614  Sum_probs=49.7

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ...++|+|+ |.++++++|+|++||+|+|++... .+||.|++  +++.|+||+|||+|+
T Consensus         2 ~~~~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yvep~   57 (58)
T d1sema_           2 TKFVQALFD-FNPQESGELAFKRGDVITLINKDD-PNWWEGQL--NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CCEEEESSC-BCCSSTTBCCBCTTCEEEEEECSS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CEEEEECCC-CCcCCcCCcCCCCCCEEEEeEEcC-CCEEEEEE--CCeEEEEEhhhEEEC
Confidence            367899999 667888999999999999999765 57999996  689999999999986

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=5.2e-16  Score=100.77  Aligned_cols=54  Identities=26%  Similarity=0.644  Sum_probs=47.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      +.++|+|+ |.++++++|+|++||+|+|++... .+||.|++  +++.|+||+|||+.
T Consensus         3 rr~~Alyd-y~~~~~~eLsf~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           3 RRVRALYD-FEAVEDNELTFKHGELITVLDDSD-ANWWQGEN--HRGTGLFPSNFVTT   56 (58)
T ss_dssp             EEEEESSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEES
T ss_pred             CEEEECCC-CCCCCcCCcCCCCCCEEEEeEEeC-CCEEEEEE--CCeEEEEehHhEee
Confidence            57899999 667888999999999999999764 58999997  58999999999973

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=4e-16  Score=102.47  Aligned_cols=57  Identities=19%  Similarity=0.400  Sum_probs=50.4

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ...|+|+|+ |.+.++++|+|++||+|+|++... .+||.|++  +++.|+||+|||+++.
T Consensus         5 g~~v~Aly~-y~a~~~~eLsf~~Gd~i~vl~~~~-~~Ww~g~~--~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           5 GSQVEALFS-YEATQPEDLEFQEGDIILVLSKVN-EEWLEGES--KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CEEEECCSC-BCCCSSSBCCBCSSCEEEEEEESS-SSCEEEEC--SSCEEEECGGGCCCSC
T ss_pred             CCEEEECCC-CCCCCcCCcCCCCCCEEEEeEEcC-CCEEEEEE--CCcEEEEchHHeEECC
Confidence            468999999 668889999999999999999775 57999995  6899999999999863

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=9.9e-16  Score=102.79  Aligned_cols=58  Identities=22%  Similarity=0.316  Sum_probs=51.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.+.++++|+|++||+|+|++...+..||.|++ ++++.|+||+|||+.+.
T Consensus         7 ~~~~Alyd-y~a~~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~-~~g~~G~~P~~yve~~~   64 (71)
T d1k9aa1           7 TECIAKYN-FHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKRE   64 (71)
T ss_dssp             CEEEESSC-BCCSSSSBCCBCTTCEEEEEEECSSTTEEEEEC-TTCCEEEEEGGGEEECC
T ss_pred             CEEEEccC-CCCCCCCCccCCCCCEEEEeEeccCCCEEEEEe-CCCCEEEEchHHeEEcc
Confidence            57899999 667888999999999999999776667999987 58999999999999875

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=2.1e-15  Score=102.83  Aligned_cols=60  Identities=18%  Similarity=0.392  Sum_probs=51.7

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeec---CCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQN---LSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn---~rtg~~G~FP~n~V~p~~~   86 (161)
                      .+.++|+|+ |.+.++++|+|++||+|+|++... ..||+|++   .++++.|+||++||+++..
T Consensus         7 g~~~~al~~-y~~~~~~eLs~~~Gd~i~Vl~~~~-~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~   69 (80)
T d1ue9a_           7 GEIAQVTSA-YVASGSEQLSLAPGQLILILKKNT-SGWWQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CEEEEECSC-CCCCSTTBCCCCTTCEEEEEEECS-SSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCEEEECcC-CCCCCCCEeeEcCCCEEEEEEEeC-CCeEEEEEccCCCCCCEeEEEheeEEECCC
Confidence            367999999 778888999999999999999765 57999985   3578899999999998764

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.58  E-value=6.2e-16  Score=99.22  Aligned_cols=55  Identities=22%  Similarity=0.326  Sum_probs=48.0

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      ++||+|| |.++.+++|+|++||+|.|++...+..||.+...++++.|+||+|||+
T Consensus         1 ~aralyd-f~a~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1           1 ENKVLYA-YVQKDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             CCEECSC-BCCCSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CCEEeee-eCCCCCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            4689999 778888999999999999999766555777777789999999999996

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.3e-15  Score=99.57  Aligned_cols=55  Identities=31%  Similarity=0.571  Sum_probs=49.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      ..++|+|| |..+++++|+|++||+|+|++...  +||.+++.++++.|+||+|||++
T Consensus         7 ~~~~al~d-y~a~~~~eLs~~~Gd~i~v~~~~~--~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           7 NLVIALHS-YEPSHDGDLGFEKGEQLRILEQSG--EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECCS--SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             cEEEECCC-CCcCCcCCcCCCCCCEEEEeEEcC--CCEEEEeccCCeEeEEcHHHEEe
Confidence            57899999 668888999999999999999654  59999988899999999999986

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=1.3e-15  Score=100.48  Aligned_cols=57  Identities=28%  Similarity=0.520  Sum_probs=50.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..|+|+|| |.++++++|+|++||+|+|++..  ..||.+++.++++.|+||+|||+++.
T Consensus         5 ~~vvAlyd-y~~~~~~eLs~~~Gd~i~v~~~~--~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1           5 IIVVALYD-YEAIHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECC--TTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEEEECCc-CCCCCcCccCCCCCCEEEEEEEC--CCCEEEEEccCCCEEEEchHHeEECc
Confidence            56889999 76888899999999999999954  35999998889999999999999874

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.4e-16  Score=101.28  Aligned_cols=56  Identities=27%  Similarity=0.483  Sum_probs=48.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC--CCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP--ECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~--e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..|+|+|| |.++++++|+|++||+|+|++...  +..||+|++  +++.|+||+|||+.+
T Consensus         5 g~v~Alyd-y~a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~--~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2           5 GVIYALWD-YEPQNDDELPMKEGDCMTIIHREDEDEIEWWWARL--NDKEGYVPRNLLGLY   62 (63)
T ss_dssp             GEEEESSC-BCCSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEE--TTEEEEEEGGGEECC
T ss_pred             CEEEEeeC-CCCCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEE--CCeEEEEchHHhEeC
Confidence            47899999 668889999999999999998653  246999997  689999999999875

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.57  E-value=8.9e-16  Score=97.88  Aligned_cols=52  Identities=17%  Similarity=0.437  Sum_probs=46.3

Q ss_pred             EEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          28 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        28 vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      |+|+|| |.+.++++|+|++||+|.|++.. +.+||.|++ .+++.|+||+|||+
T Consensus         1 V~Alyd-y~a~~~~eLs~~~Gd~~~vl~~~-~~~Ww~~~~-~~g~~G~vP~~yv~   52 (53)
T d2rn8a1           1 VIALYD-YQTNDPQELALRCDEEYYLLDSS-EIHWWRVQD-KNGHEGYAPSSYLV   52 (53)
T ss_dssp             EEESSC-CCCSSTTBCCCCTTCEEEECCCS-CSSCEEEEC-TTSCEEEECGGGEE
T ss_pred             CEEeee-ECCCCCCeeeECCCCEEEEeEEc-CCCeEEEEe-CCCCEEEEeHHHEe
Confidence            689999 77888999999999999999865 457999997 58899999999996

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.57  E-value=1.3e-15  Score=97.86  Aligned_cols=54  Identities=15%  Similarity=0.367  Sum_probs=47.8

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|+++ |.++++++|+|++||+|.|++... .+||.|+.  +++.|+||+|||+++
T Consensus         2 ~~vAl~d-y~~~~~~eLs~~~Gd~v~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYD-YQEKSPREVTMKKGDILTLLNSTN-KDWWKVEV--NDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSC-BCCCSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             EEEECCC-CCCCCcCCccCCCCCEEEEeEEcC-CCEEEEEE--CCeEEEEeHHHEEEC
Confidence            5789999 667888999999999999999765 57999994  789999999999864

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=8.7e-16  Score=99.45  Aligned_cols=55  Identities=20%  Similarity=0.489  Sum_probs=48.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|++| |.++++++|+|++||+|+|++... ..||.|++  +++.|+||+|||+++
T Consensus         3 ~~~~al~d-y~~~~~~eLs~~~Gd~i~vl~~~~-~~Ww~~~~--~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           3 QTYRAIAD-YEKTSGSEMALSTGDVVEVVEKSE-SGWWFCQM--KAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEEECSSC-BCCSSTTCCCBCTTCEEEEEECCT-TSCCEEEE--CCCCCCCCGGGCCCS
T ss_pred             eEEEECcc-CcCCCCCCcCCCCCCEEEEEEecC-CCeEEEEE--CCCCcEEcHhHEEEC
Confidence            46899999 678888999999999999999664 67999995  689999999999885

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=2.6e-15  Score=99.75  Aligned_cols=57  Identities=21%  Similarity=0.518  Sum_probs=50.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..|+|+|| |.+..+++|+|++||+|.|++... ..||.|++ .+++.|+||+|||++..
T Consensus         3 ~~v~Alyd-f~a~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yV~~~~   59 (67)
T d1gl5a_           3 EIVVAMYD-FQATEAHDLRLERGQEYIILEKND-LHWWRARD-KYGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             SCEEECSC-BCCSSSSBCCBCTTCEEEEEECSS-SSEEEEEC-SSSCEEEEETTSEESST
T ss_pred             EEEEECCC-CCCCCcCCcCCCCCCEEEEEEecC-CCcEEEEE-CCCCEEEEEhHHeEEec
Confidence            57899999 767888999999999999999754 57999997 47899999999999875

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.1e-15  Score=100.60  Aligned_cols=57  Identities=26%  Similarity=0.486  Sum_probs=50.9

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..+|++| |.+..+++|+|++||+|.|++... .+||.|++.++++.|+||+|||++..
T Consensus         4 ~~vAlyd-f~~~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1           4 TFVALYD-YESRTETDLSFKKGERLQIVNNTE-GDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             EEEESSC-BCCCSSSBCCBCTTCEEEESCCCS-SSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             EEEECcc-CCCcCcCCcCCCCCCEEEEEEEcC-CCcEEEEECCCCCEEEEehHHeEECc
Confidence            5689999 778888999999999999998665 47999999889999999999999874

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.1e-15  Score=100.39  Aligned_cols=58  Identities=22%  Similarity=0.453  Sum_probs=51.0

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCC-CCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPE-CHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e-~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.++.+++|+|++||+|.|++...+ .+||.|++. +|++|+||+|||+++.
T Consensus         7 ~~~~Alyd-f~~~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~-~G~~G~vP~~yv~~~~   65 (71)
T d1u5sa1           7 HVVQTLYP-FSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLS   65 (71)
T ss_dssp             SEEEESSC-CCCCSSSBCCCCSSCCEEEEECCCTTTCEEEEEET-TTEEEEEETTSEEECC
T ss_pred             EEEEECcc-CCCCCCCEeeECCCCEEEEEEcccCCCCeEEEEEC-CCCEEEEChHHEEECC
Confidence            67899999 7788889999999999999986543 479999984 7899999999999986

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.56  E-value=2e-15  Score=97.51  Aligned_cols=55  Identities=18%  Similarity=0.387  Sum_probs=48.3

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeec
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      .++|+|+ |.++++++|+|++||+|+|++...+..||.|+.  +++.|+||+|||+|+
T Consensus         2 ~~vAlyd-y~a~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~--~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYD-FVASGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSC-BCCCSTTBCCBCTTCEEEEEEECTTSSEEEEEC--SSCEEEEEGGGEEES
T ss_pred             EEEECcc-CCCCCcCCcCCCCCCEEEEeEecCCCCEEEEEE--CCCEeEEchhheEEC
Confidence            4789999 778889999999999999999776666888985  678899999999986

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.8e-16  Score=108.44  Aligned_cols=59  Identities=22%  Similarity=0.354  Sum_probs=50.8

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC--------------CCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP--------------ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~--------------e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..+||+|+ |...++++|+|++||+|+|+.+..              +..||+|+|.++++.|+||+|||+.+.
T Consensus         4 ~~~raly~-y~~~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~   76 (83)
T d1phta_           4 YQYRALYD-YKKEREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG   76 (83)
T ss_dssp             EEEEECSC-BCCSSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CEEEEcCc-cCCCCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcC
Confidence            46899999 768889999999999999996421              245999999999999999999999765

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.4e-15  Score=103.41  Aligned_cols=57  Identities=26%  Similarity=0.495  Sum_probs=50.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..|||+|| |.+..+++|+|++||+|+|++... ..||+|++  ++++|+||+|||+++.
T Consensus        10 ~~~~rAlyd-y~a~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~i~   66 (76)
T d1ujya_          10 QLIVKARFN-FKQTNEDELSVCKGDIIYVTRVEE-GGWWEGTL--NGRTGWFPSNYVREIK   66 (76)
T ss_dssp             CEEEECCSC-BCCSSTTSCCBCSSCCEEESSCCS-SSCEEEEE--TTEEEEECTTTSEECC
T ss_pred             CEEEEECcc-CCCCCCCCccCCCCCEEEEeEEcC-CCEEEEEE--CCcEEEEchHHEEECC
Confidence            567899999 678889999999999999999664 57999996  5899999999999875

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.6e-15  Score=102.20  Aligned_cols=57  Identities=19%  Similarity=0.302  Sum_probs=50.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+++|||+ |..+++++|+|++||+|+|++...+..||+|+.  .+++|+||+|||+++.
T Consensus        11 ~~~~alyd-y~~~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~--~g~~G~~P~~yve~i~   67 (72)
T d1ugva_          11 RKAKALYA-CKAEHDSELSFTAGTVFDNVHPSQEPGWLEGTL--NGKTGLIPENYVEFLS   67 (72)
T ss_dssp             CCEEESSC-BCCCSSSBCCBCTTCEEBSCCBCSSTTEEEEES--SSCEEEEEGGGEEECC
T ss_pred             EEEEEccc-CCCCCCCEecCCCCCEEEEeeccCCCCEEEEEe--CCCEEEEchHHEEECC
Confidence            68999999 667888999999999999999876667999985  6899999999999875

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.54  E-value=1.5e-15  Score=101.06  Aligned_cols=57  Identities=21%  Similarity=0.476  Sum_probs=47.0

Q ss_pred             ceEEEecccCCCCCCC-CccccCCCEEEEEecCC----CCCceeeecCCCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEG-KLYIDAGDQIVIIEGDP----ECHWWKGQNLSTFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~-~L~f~~GDiI~Vid~~~----e~~WW~Gqn~rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+.+++ +|+|++||+|.|+++..    +.+||+|++ .+|++|+||+|||+.+
T Consensus         6 ~~~~Alyd-y~~~~~~~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~-~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           6 EFARALYD-FVPENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEII   67 (67)
T ss_dssp             EEEEESSC-BCCSSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEC-TTSCEEEEEGGGEEEC
T ss_pred             EEEEECcc-CCCCCCCCEeCCCCCCEEEEEEeecCCCcCCCeEEEEe-CCCCEEEEEHHHEEEC
Confidence            46899999 6566664 89999999999998642    247999997 4889999999999853

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.5e-15  Score=104.66  Aligned_cols=56  Identities=23%  Similarity=0.460  Sum_probs=49.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      .+++|||| |...++++|+|++||+|+|++... .+||+|+.  ++++|+||+|||+.+.
T Consensus        35 ~~~~Alyd-y~a~~~~ELsf~~Gd~i~Vl~~~~-~gWw~g~~--~g~~G~~P~nyVe~~~   90 (98)
T d1udla_          35 CQVIAMYD-YAANNEDELSFSKGQLINVMNKDD-PDWWQGEI--NGVTGLFPSNYVKMTT   90 (98)
T ss_dssp             EEEEESSC-CCCSSTTSCCCCTTCEEEECBCCS-SSEEBCBS--SSCBCCEETTSEEECC
T ss_pred             cEEEEccC-CCCCCCCEeeEcCCCEEEEeEecC-CCeEEEEE--CCeEEEEchHHEEECC
Confidence            57899999 778888999999999999999764 57999984  7899999999999875

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.8e-15  Score=100.86  Aligned_cols=56  Identities=20%  Similarity=0.388  Sum_probs=49.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..+++|+|+ |.+.++++|+|++||+|+|++..  .+||.|++  .++.|+||+|||+++.
T Consensus        10 ~~~~~alyd-y~a~~~~ELs~~~Gd~i~vl~~~--~~ww~g~~--~g~~G~fP~~yve~i~   65 (74)
T d1j3ta_          10 NLKAQALCS-WTAKKDNHLNFSKHDIITVLEQQ--ENWWFGEV--HGGRGWFPKSYVKIIP   65 (74)
T ss_dssp             CCEEEESSC-BCCCSTTBCCBCTTCEEEEEEEC--SSEEEEES--TTCCCEEEGGGEEECC
T ss_pred             CeEEEEccC-CCCCCCCEecCCCCCEEEEEEcc--CCeEEEEE--CCcEEEEchhhEEECC
Confidence            368999999 67888999999999999999974  36999996  6899999999999875

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=7.1e-15  Score=93.75  Aligned_cols=52  Identities=17%  Similarity=0.258  Sum_probs=45.9

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      .++|+++ |.+..+++|+|++||+|+|+++.. .+||.|+  ++++.|+||+|||+
T Consensus         2 ~yval~~-y~a~~~~eLs~~~Gd~v~vl~~~~-~gWw~g~--~~g~~G~~P~~yve   53 (53)
T d1wlpb1           2 PYVAIKA-YTAVEGDEVSLLEGEAVEVIHKLL-DGWWVIR--KDDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEEECSC-BCCCSSSBCCBCTTCEEEEEECCT-TSSEEEE--SSSCEEEECSTTEE
T ss_pred             eEEEeee-ECCCCCCEecCCCCCEEEEEeecC-CceEEEE--ECCcEeEecHHhCC
Confidence            4679999 778889999999999999999765 5799999  47899999999985

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.7e-15  Score=96.60  Aligned_cols=53  Identities=17%  Similarity=0.404  Sum_probs=42.2

Q ss_pred             eEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~   82 (161)
                      +++|+|| |.+.++++|+|++||+|+|++...+..||.|..  +|+.|+||+|||+
T Consensus         2 ~a~Alyd-y~a~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~~--~g~~G~vP~nyve   54 (56)
T d1gria1           2 EAIAKYD-FKATADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKNYIE   54 (56)
T ss_dssp             EEEECSC-BCCCSSSCCCBCTTCEEEC------CCEEEEES--SSCEEEEEGGGEE
T ss_pred             EEEEeeC-CCCCCCCCcCCCCCCEEEEEeccCCCCeEEEEE--CCcEEEEehhhEE
Confidence            5789999 778889999999999999998776667999984  7899999999996

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=2.9e-15  Score=97.29  Aligned_cols=56  Identities=27%  Similarity=0.499  Sum_probs=49.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.++++++|+|++||+|+|++..  .+||.+++. +++.|+||+|||+++.
T Consensus         2 ~~a~alyd-f~a~~~~ELs~~~Gd~i~v~~~~--~~ww~~~~~-~g~~G~~P~nyve~i~   57 (59)
T d1i07a_           2 KYAKSKYD-FVARNSSELSVMKDDVLEILDDR--RQWWKVRNA-SGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CEEEESSC-BCCSSTTBCCBCTTCEEEECGGG--CCEEEEECT-TSCEEEEEGGGEEEEC
T ss_pred             eEEEEccC-CCCCCCCeeeEcCCCEEEEEEEc--CCcEEEEEc-CCCEEEECHHHeEECC
Confidence            46899999 66888999999999999999864  369999984 6899999999999875

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=2.3e-15  Score=100.05  Aligned_cols=58  Identities=19%  Similarity=0.346  Sum_probs=50.8

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      -..|+|+|+ |.++.+++|+|++||+|.|++... ..||.|++ ++|+.|+||+|||+++.
T Consensus         8 ~~~v~Alyd-y~a~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_           8 LKKVVALYD-YMPMNANDLQLRKGDEYFILEESN-LPWWRARD-KNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCEEEBSSC-CCCSSSSSCCCCSSCEEECCCCCS-SSEECCBC-TTSCBCCEETTTBCCSC
T ss_pred             CEEEEECcC-CCCCCcCCcCCCCCCEEEEEEEcC-CCeEEEEE-CCCCEEEEcHHHeEECc
Confidence            467899999 778889999999999999998664 57999997 58899999999999864

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=1.1e-14  Score=99.51  Aligned_cols=57  Identities=19%  Similarity=0.349  Sum_probs=49.7

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC---CCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP---ECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~---e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|||+ |.+.++++|+|++||+|+||+...   +..||+|+.  +++.|+||+|||+++.
T Consensus        14 ~~~~Alyd-y~a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~--~g~~G~vP~~yv~~~~   73 (79)
T d1uhca_          14 QVYFAVYT-FKARNPNELSVSANQKLKILEFKDVTGNTEWWLAEV--NGKKGYVPSNYIRKTE   73 (79)
T ss_dssp             CCEEESSC-BCCCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEES--SSCEEEEEGGGEEECC
T ss_pred             EEEEECcc-CCCCCCCCccCCCCCEEEEEEeecCCCCCCEEEEEE--CCCEEEEehhhEEECC
Confidence            57899999 678889999999999999998642   357999984  7899999999999986

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.51  E-value=9.2e-15  Score=98.59  Aligned_cols=60  Identities=12%  Similarity=0.197  Sum_probs=51.3

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCC----CCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS----TFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~r----tg~~G~FP~n~V~p~~~   86 (161)
                      ...++|+|| |....+++|+|++||+|+|++... .+||.+++..    +++.|+||+|||+|+..
T Consensus         7 g~~~~al~d-y~~~~~~eLs~~~Gd~i~vl~~~~-~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~   70 (74)
T d1wfwa_           7 GSTMTVIKD-YYALKENEICVSQGEVVQVLAVNQ-QNMCLVYQPASDHSPAAEGWVPGSILAPFSG   70 (74)
T ss_dssp             SCEEECCSC-BCCCSSSCCCBCTTCEEEEEEECT-TSEEEEEECSCSSSSSEEEEEEGGGCCBCCS
T ss_pred             CCEEEEeEE-ECCCCCCCccCccCCEEEEEEEcC-CCCEEEEeCccCCcCCeeeEEchHHeEECCC
Confidence            468999999 667888999999999999999664 5799998754    36899999999999864

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=4.3e-14  Score=98.18  Aligned_cols=59  Identities=25%  Similarity=0.358  Sum_probs=50.5

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeeecCC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...+||||+ |....+++|+|++||+|.|++... +..||+|+.  ++++|+||+|||+.+..
T Consensus         5 ~~~~rAlyd-y~~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~~--~g~~G~~P~~Yve~~~~   64 (93)
T d1uffa_           5 SSGYRALYP-FEARNHDEMSFNSGDIIQVDEKTVGEPGWLYGSF--QGNFGWFPCNYVEKMPS   64 (93)
T ss_dssp             CCCEEESSC-BCCCSSSCCCBCTTCEEEECSSCCCSSSEEEEEE--TTEEEEEETTTEEECCS
T ss_pred             CeEEEECcc-CCCCCCCCccCcCCCEEEEEEeccCCCCEEEEEe--CCcEEEEchHHEEECCC
Confidence            457899999 668888999999999999998653 456999984  79999999999998753

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.7e-14  Score=101.31  Aligned_cols=59  Identities=15%  Similarity=0.308  Sum_probs=50.5

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC---CCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP---ECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~---e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ..++|+|+ |...++++|+|++||+|+||++..   ...||++++  ++++|+||+|||+++...
T Consensus        18 ~~~~a~~~-f~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~--~g~~G~~P~~yv~~~~~~   79 (92)
T d1ug1a_          18 KLFQAERN-FNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN--GVTKGFVYSSFLKPYNPR   79 (92)
T ss_dssp             GEEEESSC-CCCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC--SSSEEEEEGGGEEECCCC
T ss_pred             eEEEEcCC-cCCCCCCeEEEecccEEEEEEcccccccCCceEEEe--cccEEEEEhhhceecCCc
Confidence            56899999 668889999999999999999752   257999995  689999999999998643

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.1e-15  Score=99.43  Aligned_cols=58  Identities=22%  Similarity=0.344  Sum_probs=50.2

Q ss_pred             CceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          25 PAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        25 P~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      +..|+|+|+ |.+..+++|+|++||+|.|++... .+||.|++ ++++.|+||+|||+++.
T Consensus         6 ~~~v~Aly~-f~a~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~-~~~~~G~fP~~yv~~~~   63 (71)
T d2hspa_           6 KCAVKALFD-YKAQREDELTFIKSAIIQNVEKQE-GGWWRGDY-GGKKQLWFPSNYVEEMV   63 (71)
T ss_dssp             SSCEECCSC-CCCSSSSSCCCCTTCEEBSCCCBT-TTEECCBC-SSCCSCCEETTTCCSCS
T ss_pred             cEEEEEccc-CCcCCcCCccCCCCCEEEEEEecC-CCEEEEEE-CCeEEEEEchHHeEEcC
Confidence            467999999 667888999999999999999654 58999996 47777899999999875

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=1.4e-14  Score=104.95  Aligned_cols=56  Identities=16%  Similarity=0.226  Sum_probs=49.3

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|| |.+.++++|+|++||+|+||+... .+||.|++  +++.|+||+|||+++.
T Consensus        15 ~~~~alyd-y~a~~~dELs~~~Gd~i~Vl~~~~-~gWw~g~~--~g~~G~~P~~yv~~~~   70 (118)
T d1ng2a2          15 EPYVAIKA-YTAVEGDEVSLLEGEAVEVIHKLL-DGWWVIRK--DDVTGYFPSMYLQKSG   70 (118)
T ss_dssp             EEEEESSC-BCCCSTTBCCBCTTCEEEEEECCT-TSEEEEEE--TTEEEEEEGGGEEETT
T ss_pred             cEEEECcC-CCCCCCCEecCCCCCEEEEeEecC-CCeEEEEE--CCeEEEEehhhEEECC
Confidence            57789999 668889999999999999999654 57999995  6899999999999864

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.48  E-value=2.3e-14  Score=92.77  Aligned_cols=55  Identities=27%  Similarity=0.504  Sum_probs=47.6

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC-CCCceeeecCCCCccceecCCCeee
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDP   83 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~-e~~WW~Gqn~rtg~~G~FP~n~V~p   83 (161)
                      +.++|+|+ |.++++++|+|++||+|+|++... +..||.|+.  +++.|+||+|||+.
T Consensus         2 P~~~Alyd-y~a~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~--~g~~G~vP~~yve~   57 (58)
T d1oota_           2 PKAVALYS-FAGEESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPANYVEL   57 (58)
T ss_dssp             CEEEESSC-BCCCSTTBCCBCTTCEEEEEECCSCTTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CeEEEccC-CCCCCCCCccCCCCCEEEEEEeecCCCCEEEEEE--CCcEEEEcHHHEEE
Confidence            46899999 678889999999999999998763 356999985  68999999999985

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=2.1e-14  Score=101.81  Aligned_cols=62  Identities=18%  Similarity=0.222  Sum_probs=49.6

Q ss_pred             CCceEEEecccCCCCC------CCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecCCC
Q psy2788          24 TPAVMKATQNCHEIDE------EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK   87 (161)
Q Consensus        24 ~P~~vrAl~d~~~~~e------~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~~~   87 (161)
                      ....++|+|| |++.+      +++|+|++||+|.|++...+..||.|.. .++++|+||+|||+++...
T Consensus        16 ~~~~~~Alyd-y~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~-~~G~~G~~P~nyve~~~~~   83 (96)
T d1wiea_          16 KVHLCVARYS-YNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGEL-LDGQRGLVPSNFVDFVQDN   83 (96)
T ss_dssp             CEEEEEESSC-CCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEE-TTCCBCBCCTTSEECCCSC
T ss_pred             CceEEEEeee-ecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEe-CCCCEEEEehHHeEECCCc
Confidence            3578899999 44432      3689999999999998766556888876 4789999999999988643

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=9.8e-15  Score=97.79  Aligned_cols=55  Identities=27%  Similarity=0.509  Sum_probs=48.4

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCeeecC
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR   85 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V~p~~   85 (161)
                      ..++|+|+ |...++++|+|++||+|+|++..  .+||+|++  +++.|+||+|||+++.
T Consensus         9 ~~~vAl~~-y~~~~~~eLs~~~Gd~v~vl~~~--~~Ww~~~~--~g~~G~vP~~yv~~~~   63 (69)
T d1uhfa_           9 EEYIALYP-YSSVEPGDLTFTEGEEILVTQKD--GEWWTGSI--GDRSGIFPSNYVKPKD   63 (69)
T ss_dssp             EEEECSSC-BCCSSSSBCCBCTTCEEEECEEE--TTEEEECS--TTCCEEECGGGCEECC
T ss_pred             cEEEECcc-CCCCCcCCcCCCCCCEEEEEEec--CCEEEEEE--CCcEEEEchhhEEECC
Confidence            57889999 66888899999999999999864  36999995  6899999999999975

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=5.5e-15  Score=101.92  Aligned_cols=58  Identities=21%  Similarity=0.371  Sum_probs=48.2

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecCC----CCCceeeecC--------CCCccceecCCCeeec
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDP----ECHWWKGQNL--------STFNIGMFPRNIMDPM   84 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~~----e~~WW~Gqn~--------rtg~~G~FP~n~V~p~   84 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|++...    +..||.|.+.        .+++.|+||+|||+.+
T Consensus        13 ~~~~Alyd-y~a~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          13 FKVQAQHD-YTATDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             EEEEEcee-ECCCCCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            57899999 678888999999999999997642    3469999742        3578999999999865

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.6e-14  Score=101.16  Aligned_cols=66  Identities=18%  Similarity=0.281  Sum_probs=52.1

Q ss_pred             ceEEEecccCCCCCCCCccccCCCEEEEEecC--CCCCceeeec------CCCCccceecCCCeeecCCCCCCCc
Q psy2788          26 AVMKATQNCHEIDEEGKLYIDAGDQIVIIEGD--PECHWWKGQN------LSTFNIGMFPRNIMDPMRRKQPDDI   92 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~L~f~~GDiI~Vid~~--~e~~WW~Gqn------~rtg~~G~FP~n~V~p~~~~~~~~I   92 (161)
                      ..++|+|+ |.+.++++|+|++||+|.|+++.  .+.+||.|+.      ..++++|+||+|||+.+....++..
T Consensus        22 ~~~~Alyd-y~~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~~~~~~~   95 (106)
T d1i1ja_          22 SMAVALQD-YMAPDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKV   95 (106)
T ss_dssp             EEEEESSC-BCCSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEECSCCCE
T ss_pred             eEEEEccc-cCCCCCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEccccCcccc
Confidence            46899999 66888999999999999999863  2357999973      3357899999999998765444333

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.40  E-value=2.1e-14  Score=100.70  Aligned_cols=55  Identities=20%  Similarity=0.400  Sum_probs=44.8

Q ss_pred             eEEEecccCCCCC-----CCCccccCCCEEEEEecCCCCCceeeec----CCCCccceecCCCeee
Q psy2788          27 VMKATQNCHEIDE-----EGKLYIDAGDQIVIIEGDPECHWWKGQN----LSTFNIGMFPRNIMDP   83 (161)
Q Consensus        27 ~vrAl~d~~~~~e-----~~~L~f~~GDiI~Vid~~~e~~WW~Gqn----~rtg~~G~FP~n~V~p   83 (161)
                      .|||+|| |+..+     ..+|+|++||+|+||+... .+||+|+.    .+++++|+||+|||..
T Consensus         3 ~vrAlyd-y~~~~d~~~~~~eLsf~kGdil~V~~~~d-~~WW~~~~~~~~~~~g~~G~~Psnyv~e   66 (96)
T d1kjwa1           3 YIRALFD-YDKTKDCGFLSQALSFRFGDVLHVIDAGD-EEWWQARRVHSDSETDDIGFIPSKRRVE   66 (96)
T ss_dssp             EEEESSC-BCHHHHHCCCSSBCCBCTTCEEEEEECCS-SSEEEEEECCSSCCCSCCEEEECHHHHH
T ss_pred             EEEEccc-CcCCcCCCCCCccceEcCCCEEEEeeecc-CceEEEEEccCCCCCCCEeEEeccceee
Confidence            5799999 54433     2489999999999999764 58999984    3578999999999974

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.40  E-value=6.3e-14  Score=99.66  Aligned_cols=54  Identities=19%  Similarity=0.396  Sum_probs=45.3

Q ss_pred             ceEEEecccCCCCCCCC-------ccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCe
Q psy2788          26 AVMKATQNCHEIDEEGK-------LYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIM   81 (161)
Q Consensus        26 ~~vrAl~d~~~~~e~~~-------L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V   81 (161)
                      ..|+|+|| |++.++++       |+|++||+|.|+++.. .+||+|++.. ++++|+||++++
T Consensus        22 ~~vrAlyd-Y~~~~dd~~P~~~~~LsF~~GDii~v~~~~d-~~WW~gr~~~~~g~~G~~PS~~~   83 (96)
T d1t0ha_          22 FAVRTNVR-YSAAQEDDVPVPGMAISFEAKDFLHVKEKFN-NDWWIGRLVKEGCEIGFIPSPVK   83 (96)
T ss_dssp             EEEEESSC-BCCCGGGCCSSTTCBCCBCTTCEEEEEEECS-SSEEEEEESSTTCCCEEEECHHH
T ss_pred             EEEEEeec-cCCCCCCCCccccccccCCCCCEEEEeeeeC-CCceEEEEcCCCCCEEEecCcHH
Confidence            46899999 66766666       9999999999999775 5799999854 479999999874

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.23  E-value=1.9e-12  Score=97.15  Aligned_cols=54  Identities=22%  Similarity=0.330  Sum_probs=44.4

Q ss_pred             eEEEecccCCCCCCCC-------ccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCee
Q psy2788          27 VMKATQNCHEIDEEGK-------LYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMD   82 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~-------L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V~   82 (161)
                      .|||++| |+..++++       |+|++||+|.|+++.. .+||+|++.. .++.|+||++|+.
T Consensus        25 ~vra~~d-y~~~~d~~~p~~~~~LsF~kGDii~V~~~~d-~~WW~gr~~~~~g~~G~iPS~~~~   86 (145)
T d1vyva1          25 AVKTNVS-YCGALDEDVPVPSSAVSFDAKDFLHIKEKYN-NDWWIGRLVKEGCEIGFIPSPLRL   86 (145)
T ss_dssp             EEEESSC-BCTTSCCSCSSTTCBCCBCTTCEEEEEEEEE-TTEEEEEESSTTCCCEEEECHHHH
T ss_pred             EEEEeee-eCCccCCcCCcccccccCcCCCEEEEeeccC-CCcEEEEEcCCCCceeEeCCchhh
Confidence            6999999 55655555       9999999999999764 5899999743 5899999998743

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.99  E-value=6.8e-11  Score=88.26  Aligned_cols=53  Identities=17%  Similarity=0.258  Sum_probs=42.8

Q ss_pred             eEEEecccCCCCCCCC-------ccccCCCEEEEEecCCCCCceeeecCC-CCccceecCCCe
Q psy2788          27 VMKATQNCHEIDEEGK-------LYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIM   81 (161)
Q Consensus        27 ~vrAl~d~~~~~e~~~-------L~f~~GDiI~Vid~~~e~~WW~Gqn~r-tg~~G~FP~n~V   81 (161)
                      .|||+++ |+..++++       |+|++||+|.|+++.. .+||.|++.+ .+++|+||++|+
T Consensus        25 ~vra~~~-Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d-~~WW~~r~~~~~~~~G~iPs~~~   85 (136)
T d1vyua1          25 AVRTNVS-YCGVLDEECPVQGSGVNFEAKDFLHIKEKYS-NDWWIGRLVKEGGDIAFIPSPQR   85 (136)
T ss_dssp             EEEESSC-EEGGGCTTCSSTTCBCEECTTCEEEEEEECS-SSEEEEEESSTTCCCEEEECHHH
T ss_pred             EEEEeec-cCCCCCCCCcccCcccCCCCCCEEEEEeccC-CCcEEEEeccCCCceeccCchHH
Confidence            6899999 55544444       9999999999999764 5799999754 478999999874

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.38  E-value=0.004  Score=41.35  Aligned_cols=39  Identities=15%  Similarity=0.161  Sum_probs=33.5

Q ss_pred             CCccccCCCEEEEEecCCCCCceeeecCCCCccceecCCCe
Q psy2788          41 GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM   81 (161)
Q Consensus        41 ~~L~f~~GDiI~Vid~~~e~~WW~Gqn~rtg~~G~FP~n~V   81 (161)
                      .+|.++.|+.|.||+.++ ..-|-++|. .|+.|+.+...|
T Consensus        37 ~dL~vk~GE~ldVIr~t~-~~k~LcRN~-~GkYGYV~~~~l   75 (77)
T d1ri9a_          37 RDLQVKPGESLEVIQTTD-DTKVLCRNE-EGKYGYVLRSYL   75 (77)
T ss_dssp             TBCCCCTTCBCEEEEESS-SSEEEEEET-TTEEEEEEGGGS
T ss_pred             ccCCcCCCCEEEEEEeCC-CCeEEEEcC-CCcEEEEEeeee
Confidence            489999999999999876 568999996 799999986643

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.35  E-value=0.15  Score=33.66  Aligned_cols=20  Identities=20%  Similarity=0.212  Sum_probs=16.2

Q ss_pred             cCCCCccceecCCCeeecCC
Q psy2788          67 NLSTFNIGMFPRNIMDPMRR   86 (161)
Q Consensus        67 n~rtg~~G~FP~n~V~p~~~   86 (161)
                      ...+|+.|+||++||+++..
T Consensus         3 ~~~~G~~G~~P~~yv~~~~~   22 (98)
T d1udla_           3 SGSSGQKGWFPASHVKLLGP   22 (98)
T ss_dssp             CCCSSCCSSCCCCCCCCCSC
T ss_pred             cCCCCceeeEcccceeECCC
Confidence            34578999999999997654