Psyllid ID: psy3132
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 507 | 2.2.26 [Sep-21-2011] | |||||||
| P51650 | 523 | Succinate-semialdehyde de | yes | N/A | 0.934 | 0.906 | 0.525 | 1e-148 | |
| Q8BWF0 | 523 | Succinate-semialdehyde de | yes | N/A | 0.934 | 0.906 | 0.521 | 1e-147 | |
| P51649 | 535 | Succinate-semialdehyde de | yes | N/A | 0.936 | 0.887 | 0.522 | 1e-139 | |
| Q6A2H1 | 535 | Succinate-semialdehyde de | N/A | N/A | 0.936 | 0.887 | 0.522 | 1e-139 | |
| Q3MSM3 | 535 | Succinate-semialdehyde de | N/A | N/A | 0.936 | 0.887 | 0.519 | 1e-139 | |
| Q6A2H2 | 535 | Succinate-semialdehyde de | N/A | N/A | 0.936 | 0.887 | 0.519 | 1e-139 | |
| Q6A2H0 | 535 | Succinate-semialdehyde de | yes | N/A | 0.936 | 0.887 | 0.522 | 1e-139 | |
| Q3MSM4 | 535 | Succinate-semialdehyde de | N/A | N/A | 0.936 | 0.887 | 0.522 | 1e-139 | |
| Q9SAK4 | 528 | Succinate-semialdehyde de | yes | N/A | 0.919 | 0.882 | 0.506 | 1e-135 | |
| P25526 | 482 | Succinate-semialdehyde de | N/A | N/A | 0.923 | 0.970 | 0.489 | 1e-133 |
| >sp|P51650|SSDH_RAT Succinate-semialdehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh5a1 PE=1 SV=2 | Back alignment and function desciption |
|---|
Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust.
Identities = 250/476 (52%), Positives = 342/476 (71%), Gaps = 2/476 (0%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+++ G W+ + FPVY+PA+ L V D GV + + A+ +A +AF W + + KER
Sbjct: 50 DSFVGGRWLPTPATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERS 109
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
+L++W + NK LA+I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++ +
Sbjct: 110 SLLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYT 169
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
K K L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALALA
Sbjct: 170 SAKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALA 229
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
LA++A IP GV NV+ SRT A VG++LCT P V+ ISFTGST GKIL H + +K
Sbjct: 230 QLANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVK 289
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
R+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +NRFL+Q + D FV
Sbjct: 290 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFA 349
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
+ KS G+ + + GPLIN VEKV+ V DA++KGA V+ GGK + G F
Sbjct: 350 EAMKKSLRVGNGFE-EGTTQGPLINEKAVEKVEKHVNDAVAKGATVVT-GGKRHQSGGNF 407
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
F PT+L+N+T DMLC TEE FGPVA IKF EEE++ +AN ++ GLAGYF++ D +Q W
Sbjct: 408 FEPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIW 467
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
RV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 468 RVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Rattus norvegicus (taxid: 10116) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 4 |
| >sp|Q8BWF0|SSDH_MOUSE Succinate-semialdehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh5a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 248/476 (52%), Positives = 340/476 (71%), Gaps = 2/476 (0%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+++ G W+ + FPVY+PA+ L V D GV + + A+ +A +AF W + KER
Sbjct: 50 DSFVGGRWLPAPATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFNSWKGVSVKERS 109
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
++L++W + NK LA+I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++ +
Sbjct: 110 LLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSALFLEWFSEEARRIYGDIIYT 169
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
K K L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALALA
Sbjct: 170 SAKDKRGLVLKQPVGVAAIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALA 229
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
LA++A IP GV NV+ SR A VG++LCT P V+ ISFTGST GKIL H + +K
Sbjct: 230 QLANQAGIPAGVYNVIPCSRNKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVK 289
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
R+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +NRFL+Q + D FV
Sbjct: 290 RVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFA 349
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
+ KS G+ + + GPLIN VEKV+ V DA++KGA V+ GGK + G F
Sbjct: 350 EAMKKSLRVGNGFE-EGTTQGPLINEKAVEKVEKQVNDAVAKGATVVT-GGKRHQSGGNF 407
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
F PT+L+N+T DMLC TEE FGP+A IKF EEE++ +AN + GLAGYF++ D +Q W
Sbjct: 408 FEPTLLSNVTRDMLCITEETFGPLAPVIKFDKEEEAVAIANAAEVGLAGYFYSQDPAQIW 467
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
RV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 468 RVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P51649|SSDH_HUMAN Succinate-semialdehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH5A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 496 bits (1277), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/477 (52%), Positives = 342/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H1|SSDH_GORGO Succinate-semialdehyde dehydrogenase, mitochondrial OS=Gorilla gorilla gorilla GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/477 (52%), Positives = 342/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Gorilla gorilla gorilla (taxid: 9595) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM3|SSDH_HYLLA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Hylobates lar GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 495 bits (1275), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/477 (51%), Positives = 341/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GA+A+KFRN GQ CV +NRFL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA ++ GGK +LG
Sbjct: 361 AEAMKKNLHVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATIVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Hylobates lar (taxid: 9580) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H2|SSDH_PONPY Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pongo pygmaeus GN=ALDH5A1 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 248/477 (51%), Positives = 341/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA ++ GGK +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATIVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pongo pygmaeus (taxid: 9600) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q6A2H0|SSDH_PANTR Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan troglodytes GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 495 bits (1274), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/477 (52%), Positives = 341/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPXGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan troglodytes (taxid: 9598) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q3MSM4|SSDH_PANPA Succinate-semialdehyde dehydrogenase, mitochondrial OS=Pan paniscus GN=ALDH5A1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1271), Expect = e-139, Method: Compositional matrix adjust.
Identities = 249/477 (52%), Positives = 341/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCCWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
Catalyzes one step in the degradation of the inhibitory neurotransmitter gamma-aminobutyric acid (GABA). Pan paniscus (taxid: 9597) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|Q9SAK4|SSDH_ARATH Succinate-semialdehyde dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=ALDH5F1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 481 bits (1239), Expect = e-135, Method: Compositional matrix adjust.
Identities = 245/484 (50%), Positives = 340/484 (70%), Gaps = 18/484 (3%)
Query: 30 TQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
TQ I G+W+ S +K V NPA E +ADV MG ++ AI S+ EAF WS+ T
Sbjct: 53 TQGLIGGKWLDSYDNKTIKVNNPATGEIIADVACMGTKETNDAIASSYEAFTSWSRLTAG 112
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER VL+RW L +K+ L +++T E GKP E++GEV Y SF+++++EEA+R YG++
Sbjct: 113 ERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAYGASFIEYYAEEAKRVYGDI 172
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P + + LL++++P+GVVG ITPWNFP+AMITRKV PALA+GCT V+KP+E TPLTAL
Sbjct: 173 IPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCTVVVKPSELTPLTAL 232
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
A A LA +A +P G LNVV NA +G L TSP V I+FTGST VGK L + +
Sbjct: 233 AAAELALQAGVPPGALNVVMG---NAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAAAP 289
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+K++SLELGGNAP IV+ +A+L AV G +AAKFRN GQ CV ANR L+Q+ ++D+F E
Sbjct: 290 TVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKFAE 349
Query: 328 ML-----KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
K+E+ F G T GPLIN A V+KV++ VQDA+SKGAK+I+ GGK
Sbjct: 350 AFSEAVQKLEVGDGFRDGTTQ-------GPLINDAAVQKVETFVQDAVSKGAKIII-GGK 401
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
LG F+ PT++ +++ +M+ EE+FGPVA I+FKTEE+++ +AN++ GLA Y F
Sbjct: 402 RHSLGMTFYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIF 461
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
TN + ++WRV + L+ G+VG+NEG+IS A FGGVK+SGLGREGS++GM+E+ +IKY+C
Sbjct: 462 TNSVQRSWRVFEALEYGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVC 521
Query: 503 FGNL 506
G++
Sbjct: 522 LGDM 525
|
Oxidizes specifically succinate semialdehyde. Involved in plant response to environmental stress by preventing the accumulation of reactive oxygen species. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 2 EC: 4 |
| >sp|P25526|GABD_ECOLI Succinate-semialdehyde dehydrogenase [NADP(+)] GabD OS=Escherichia coli (strain K12) GN=gabD PE=1 SV=1 | Back alignment and function description |
|---|
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/476 (48%), Positives = 320/476 (67%), Gaps = 8/476 (1%)
Query: 31 QAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
QA INGEW+ ++ + V NPAN + L VP MG ++ + AI +A A W T KE
Sbjct: 12 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 71
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+ W + ++ LA +MT E GKP E+ GE+ YA SF++WF+EE +R YG+ +
Sbjct: 72 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 131
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
P K L+++++P+GV ITPWNFP AMITRK PALAAGCT V+KPA TP +ALA
Sbjct: 132 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 191
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
LA LA A +P GV NVVT S A +VG L ++P V +SFTGST++G+ L C++
Sbjct: 192 LAELAIRAGVPAGVFNVVTGS---AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
IK++SLELGGNAPFIV+ +A+L KAV GA+A+KFRN GQ CV ANR +Q+ V+D+F E
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L+ ++K I GD N +GPLI+ V KV+ + DA+ KGA+V+ GGK + G
Sbjct: 309 LQQAVSKLHI-GDGLDN-GVTIGPLIDEKAVAKVEEHIADALEKGARVVC-GGKAHERGG 365
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
FF PTIL ++ + EE FGP+A +FK E + + AN++ GLA YF+ D+S+
Sbjct: 366 NFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSR 425
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+RVG+ L+ G+VGIN GIIS+ A FGG+K SGLGREGS++G+E++ +IKYMC G
Sbjct: 426 VFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. It appears to be important for nitrogen metabolism under N limitation conditions. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: 7 EC: 9 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 507 | ||||||
| 193652450 | 504 | PREDICTED: succinate-semialdehyde dehydr | 0.950 | 0.956 | 0.637 | 0.0 | |
| 170034346 | 511 | succinate semialdehyde dehydrogenase, mi | 0.972 | 0.964 | 0.576 | 1e-168 | |
| 166998042 | 509 | succinic semialdehyde dehydrogenase [Cte | 0.934 | 0.931 | 0.615 | 1e-167 | |
| 166998040 | 509 | succinic semialdehyde dehydrogenase [Cte | 0.934 | 0.931 | 0.615 | 1e-167 | |
| 242007010 | 516 | Succinate semialdehyde dehydrogenase, pu | 0.934 | 0.918 | 0.621 | 1e-166 | |
| 91091444 | 496 | PREDICTED: similar to succinate semialde | 0.934 | 0.955 | 0.592 | 1e-165 | |
| 157107083 | 514 | succinate semialdehyde dehydrogenase [Ae | 0.956 | 0.943 | 0.576 | 1e-165 | |
| 347969394 | 488 | AGAP003165-PA [Anopheles gambiae str. PE | 0.938 | 0.975 | 0.599 | 1e-163 | |
| 195453876 | 504 | GK14395 [Drosophila willistoni] gi|19417 | 0.964 | 0.970 | 0.563 | 1e-163 | |
| 312385184 | 601 | hypothetical protein AND_01074 [Anophele | 0.940 | 0.793 | 0.604 | 1e-162 |
| >gi|193652450|ref|XP_001949031.1| PREDICTED: succinate-semialdehyde dehydrogenase, mitochondrial-like isoform 1 [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/491 (63%), Positives = 384/491 (78%), Gaps = 9/491 (1%)
Query: 24 LCLSTY-----TQAYINGEW--VHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
+C Y T+AY+NGEW S K F V NPA + +A VPD+ DVQ AI +A +
Sbjct: 15 MCAQRYSTMWPTKAYVNGEWCDAKSGKTFDVVNPATGKTIATVPDLDASDVQVAINAAND 74
Query: 77 AFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWF 136
AF W +TT KER +L+ W L NK LA+I+T E+GKP ESLGEV Y NSFV+WF
Sbjct: 75 AFNTWKKTTAKERSDLLRNWYNILVKNKDYLADIVTSEAGKPLVESLGEVAYGNSFVEWF 134
Query: 137 SEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI 196
SEEARRTYGE VPSP K+KE+LM+R+PLG VGLITPWNFP+AMITRK ALAAGCTCVI
Sbjct: 135 SEEARRTYGEHVPSPNKTKEILMIRQPLGPVGLITPWNFPIAMITRKAGAALAAGCTCVI 194
Query: 197 KPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQ 256
KPAE+TP+TAL LA A +A IPKGV+N+VT+SR N +GKLLC SP + GISFTGST+
Sbjct: 195 KPAENTPITALVLAKFAEDAGIPKGVINIVTTSRENTPEIGKLLCESPDIYGISFTGSTE 254
Query: 257 VGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL 316
VGK+LY CS +KR+ LELGGNAPF+V++ A++ KAV+GAMA+KFRNCGQ CV+ANRF+
Sbjct: 255 VGKLLYKQCSSTVKRVGLELGGNAPFVVFNEADIDKAVAGAMASKFRNCGQTCVSANRFI 314
Query: 317 IQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376
IQ+ VF +FV+ LKVE+ K + GD K NLGPLIN AQ +KVD IV DA +KGAK+
Sbjct: 315 IQKNVFTEFVDKLKVEMDK-LVMGD-GKTSGVNLGPLINFAQADKVDRIVNDAKNKGAKI 372
Query: 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
I GG + +G +F+ PT++TN+T DM CY EE+FGPVAVCI+F TE+E L +AN++N G
Sbjct: 373 ITGGKRALSVGERFYEPTLITNVTKDMACYVEEIFGPVAVCIEFDTEQEGLEIANSTNRG 432
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
LAGYF++ND+SQ WRV K L+VGMVG+NEGIIS TEAAFGGVKESGLGREGSRHGM+E+T
Sbjct: 433 LAGYFYSNDLSQVWRVAKALEVGMVGVNEGIISATEAAFGGVKESGLGREGSRHGMDEYT 492
Query: 497 QIKYMCFGNLE 507
+IKY+CFGNLE
Sbjct: 493 EIKYICFGNLE 503
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|170034346|ref|XP_001845035.1| succinate semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] gi|167875668|gb|EDS39051.1| succinate semialdehyde dehydrogenase, mitochondrial [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/500 (57%), Positives = 379/500 (75%), Gaps = 7/500 (1%)
Query: 12 TVKQMHMKYLQKLCLSTYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQY 69
TV+ + + L+ + L +QA++NG WV + F V NPAN+ + VPDM V D
Sbjct: 15 TVRSIQGQILRTMHLQQ-SQAFVNGRWVGARGGQTFDVTNPANERVIGTVPDMDVSDANE 73
Query: 70 AIMSAKEAF--EQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127
AI +A AF +QW +T KER +LK+W + +E N+ +A+IMT ESGKP ES+GE+
Sbjct: 74 AIDAAYSAFYDKQWHNSTAKERAALLKKWFQLMEANRSEIAQIMTAESGKPIPESMGEIT 133
Query: 128 YANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187
Y NSFV+WF+EEARR YGE+VP+P ++++++ ++P+GV LITPWNFP AMITRK A A
Sbjct: 134 YGNSFVEWFAEEARRIYGEIVPAPQANRQIMLTKQPVGVAALITPWNFPHAMITRKAAAA 193
Query: 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVA 247
+AAGCT VIKPAEDTPLTALAL LA EA PKGV+NVVTSSR NA S+G+LLCTS VA
Sbjct: 194 IAAGCTVVIKPAEDTPLTALALTKLAEEAGFPKGVVNVVTSSRKNAASIGELLCTSDKVA 253
Query: 248 GISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQ 307
ISFTGST+VGK+LY C+ GIKR+ LELGGNAPFIV+ +A+L KAV+GAM +KFRNCGQ
Sbjct: 254 AISFTGSTEVGKLLYRQCANGIKRIGLELGGNAPFIVFKSADLDKAVTGAMNSKFRNCGQ 313
Query: 308 ACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367
C++ANRFLIQ+++ D+F+ L E K+ GD S+ D +GPLIN AQ++KV V+
Sbjct: 314 TCISANRFLIQDEIHDEFIAKL-TEKLKALKIGDGSQ-DGVQIGPLINHAQIKKVSHFVE 371
Query: 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427
DA KGAK+I GG +T GS FF PTI+T++ DML Y EEVFGPV I+FKTEEE+L
Sbjct: 372 DAQQKGAKIIYGGKPLTNHGSLFFEPTIVTHLRDDMLLYNEEVFGPVVSVIRFKTEEEAL 431
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREG 487
+AN + GLAGYF++ND++Q +RV + L+ GM+G+NEG+IS TEAAFGG+KESG+GREG
Sbjct: 432 KIANGTQRGLAGYFYSNDLNQVFRVSRLLETGMIGVNEGLISTTEAAFGGIKESGIGREG 491
Query: 488 SRHGMEEFTQIKYMCFGNLE 507
S++G++E+ IKY+C+GNL+
Sbjct: 492 SKYGIDEYVYIKYLCYGNLD 511
|
Source: Culex quinquefasciatus Species: Culex quinquefasciatus Genus: Culex Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|166998042|emb|CAP78908.1| succinic semialdehyde dehydrogenase [Ctenocephalides felis] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/478 (61%), Positives = 371/478 (77%), Gaps = 4/478 (0%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+A++N +WV S F V NPAN + + VP+M ED Q AI +A AF+ W TT KE
Sbjct: 33 KAFVNNDWVQGVSGNTFDVINPANSQVVGSVPNMNTEDTQQAIEAASLAFQTWQDTTAKE 92
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+RW + NKQ LAEIMT ESGKP E+LGEVVY NSFV+WFSE+ARR GE++
Sbjct: 93 RSQLLRRWFDLMVENKQQLAEIMTAESGKPINEALGEVVYGNSFVEWFSEQARRIDGEII 152
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
SP SK++L+ ++P+GVV LITPWNFP AMITRK A ALAAGCTCVIKPAEDTPLTALA
Sbjct: 153 QSPTPSKQILLTKQPIGVVALITPWNFPHAMITRKAAAALAAGCTCVIKPAEDTPLTALA 212
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
LA LA +A IPKGV+N+VT R+ A VGK+LC P VAG+SFTGST+VGKILY C++
Sbjct: 213 LAQLAQDAGIPKGVINIVTCDRSLAPEVGKILCEHPKVAGLSFTGSTEVGKILYQQCAKH 272
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+KR+ LELGGNAPFIV+S ++L KAV GAMA+KFRNCGQ CV+ANRF++Q+ +FDQFV
Sbjct: 273 VKRVGLELGGNAPFIVFSKSDLDKAVQGAMASKFRNCGQTCVSANRFIVQKDIFDQFVSK 332
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
LK + + GD K+ K +GPLIN AQ KV +VQDA+SKGA+ ++ GGK G+
Sbjct: 333 LKFAMHNQLVIGD-GKDTKTTIGPLINKAQATKVHDLVQDALSKGAEAVV-GGKPASHGA 390
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F+ PT+LTNI DM Y+EE+FGPVAVCI F+TEEE+L +AN++ GLAGYF+++DI+Q
Sbjct: 391 LFYEPTLLTNINKDMRVYSEEIFGPVAVCISFETEEEALKIANDTRRGLAGYFYSSDIAQ 450
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
A+RV +K++VGMVGINEG+IS TEAAFGG+KESG+GREGS+HG+EE+ +KY CFG L
Sbjct: 451 AFRVARKMEVGMVGINEGMISATEAAFGGIKESGVGREGSKHGIEEYVYVKYTCFGGL 508
|
Source: Ctenocephalides felis Species: Ctenocephalides felis Genus: Ctenocephalides Family: Pulicidae Order: Siphonaptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|166998040|emb|CAP78907.1| succinic semialdehyde dehydrogenase [Ctenocephalides felis] | Back alignment and taxonomy information |
|---|
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 294/478 (61%), Positives = 371/478 (77%), Gaps = 4/478 (0%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+A++N +WV S F V NPAN + + VP+M ED Q AI +A AF+ W TT KE
Sbjct: 33 KAFVNNDWVQGVSGNTFDVINPANSQVVGSVPNMNTEDTQQAIEAASLAFQTWQDTTAKE 92
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+RW + NKQ LAEIMT ESGKP E+LGEVVY NSFV+WFSE+ARR GE++
Sbjct: 93 RSQLLRRWFDLMVENKQQLAEIMTAESGKPINEALGEVVYGNSFVEWFSEQARRIDGEII 152
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
SP SK++L+ ++P+GVV LITPWNFP AMITRK A ALAAGCTCVIKPAEDTPLTALA
Sbjct: 153 QSPTPSKQILLTKQPIGVVALITPWNFPHAMITRKAAAALAAGCTCVIKPAEDTPLTALA 212
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
LA LA +A IPKGV+N+VT R+ A VGK+LC P VAG+SFTGST+VGKILY C++
Sbjct: 213 LAQLAQDAGIPKGVINIVTCDRSLAPEVGKILCEHPKVAGLSFTGSTEVGKILYQQCAKH 272
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+KR+ LELGGNAPFIV+S ++L KAV GAMA+KFRNCGQ CV+ANRF++Q+ +FDQFV
Sbjct: 273 VKRVGLELGGNAPFIVFSKSDLDKAVQGAMASKFRNCGQTCVSANRFIVQKDIFDQFVSK 332
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
LK + + GD K+ K +GPLIN AQ KV +VQDA+SKGA+ ++ GGK G+
Sbjct: 333 LKFAMHNQLVIGD-GKDTKTTIGPLINKAQATKVHDLVQDALSKGAEAVV-GGKPASHGA 390
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F+ PT+LTNI DM Y+EE+FGPVAVCI F+TEEE+L +AN++ GLAGYF+++DI+Q
Sbjct: 391 LFYEPTLLTNINKDMRVYSEEIFGPVAVCISFETEEEALKIANDTRRGLAGYFYSSDIAQ 450
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
A+RV +K++VGMVGINEG+IS TEAAFGG+KESG+GREGS+HG+EE+ +KY CFG L
Sbjct: 451 AFRVARKMEVGMVGINEGMISATEAAFGGIKESGVGREGSKHGIEEYVYVKYTCFGGL 508
|
Source: Ctenocephalides felis Species: Ctenocephalides felis Genus: Ctenocephalides Family: Pulicidae Order: Siphonaptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242007010|ref|XP_002424335.1| Succinate semialdehyde dehydrogenase, putative [Pediculus humanus corporis] gi|212507735|gb|EEB11597.1| Succinate semialdehyde dehydrogenase, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/478 (62%), Positives = 376/478 (78%), Gaps = 4/478 (0%)
Query: 31 QAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
++++NG+WV+ +KKF V NPA + + P++ VEDV AI A EAF+ W TTPKE
Sbjct: 36 KSFVNGKWVNGVLNKKFDVVNPATGKIIGSAPNLNVEDVSEAINYASEAFKLWKTTTPKE 95
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L++W L N LA+I+T ESGK TE+LGEV Y+NSFV+WFSEEARR +GE++
Sbjct: 96 RSDLLRQWYNLLVKNADELADIVTAESGKCKTEALGEVKYSNSFVEWFSEEARRIHGEVI 155
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
KSK+++ +++P+GVVGLITPWNFP+AMITRK A ALAAGCTC+IKPAEDTPL+ALA
Sbjct: 156 DGQAKSKQMIFIKQPIGVVGLITPWNFPVAMITRKAAAALAAGCTCIIKPAEDTPLSALA 215
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
LA LA +A P GV+NVVT R NA +GKL+CT VAGISFTGST VGKILYS CS G
Sbjct: 216 LADLADQAGFPPGVINVVTCDRNNAPDIGKLICTHDSVAGISFTGSTAVGKILYSQCSTG 275
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+KR++LELGGNAPFIV+++A L +AV GAMA+KFRNCGQ CV+ANRFLIQE+V D+F+
Sbjct: 276 VKRIALELGGNAPFIVFNSAKLDEAVEGAMASKFRNCGQTCVSANRFLIQEEVVDEFISK 335
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L ++ S GD SK ++GPLIN Q+ KV S+V DAISKGAKVI GG K+T+LG+
Sbjct: 336 LSSKL-DSLTCGDGSK-PGISMGPLINEMQINKVSSLVDDAISKGAKVIKGGKKLTELGN 393
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F+APTILTNI P+M CY EE+FGPV IKFKTEEE++ +ANN+ +GLAGYF+++D++Q
Sbjct: 394 LFYAPTILTNIKPEMNCYNEEIFGPVVQIIKFKTEEEAIEIANNTKSGLAGYFYSSDLNQ 453
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV KKL+ GM+GINEGIIS EAAFGGVKESG+GREGS +G++EF IKY+CF N+
Sbjct: 454 IWRVSKKLETGMIGINEGIISCPEAAFGGVKESGIGREGSHYGIDEFVYIKYLCFENI 511
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91091444|ref|XP_972566.1| PREDICTED: similar to succinate semialdehyde dehydrogenase, mitochondrial [Tribolium castaneum] gi|270000977|gb|EEZ97424.1| hypothetical protein TcasGA2_TC011254 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 283/478 (59%), Positives = 357/478 (74%), Gaps = 4/478 (0%)
Query: 31 QAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+AYING+W+ S K F V NPA E + PDM D Q AI A AF+ W TT K+
Sbjct: 21 KAYINGQWLGAQSGKVFQVTNPATGEVIGTAPDMDTSDTQRAIEGAHAAFQTWQDTTAKD 80
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R L++W + N + LA+I+T E+GKP E+ GEV Y NSF+++FSEEARR +GE++
Sbjct: 81 RSHYLRKWYDLMAQNHEDLAKIITLEAGKPLVEARGEVAYGNSFIEFFSEEARRIHGEII 140
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
PSP+ +K++L+ R+P+GV GLI PWNFP AMITRK ALA+GCTCVIKPAEDTP TALA
Sbjct: 141 PSPIPTKKILVERQPIGVAGLIAPWNFPHAMITRKAGAALASGCTCVIKPAEDTPFTALA 200
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
L LAH+A IP GV+NVVTSSR NA ++G LLC SP VAGISFTGSTQVGK+LY CS G
Sbjct: 201 LMELAHQAGIPSGVVNVVTSSRENAPAIGNLLCESPLVAGISFTGSTQVGKLLYRQCSSG 260
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+KRL LELGGNAPFIV+++AN+ AV GAMA+KFRNCGQ CV++NRFL+Q +V+D FV
Sbjct: 261 VKRLGLELGGNAPFIVFNSANVGHAVKGAMASKFRNCGQTCVSSNRFLVQGKVYDSFVGS 320
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L EI KS G+ + N+GPLIN AQ KV +V+DA+SKGAKV+ GG + G
Sbjct: 321 LVKEI-KSLKIGN-GQECGVNVGPLINQAQFGKVSDLVEDAVSKGAKVLTGGKAARQFGE 378
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F+ PT+LT+I +M YTEEVFGP+ +F+TEEE L +AN++ GLAGYF++ D+SQ
Sbjct: 379 LFYEPTVLTDIKENMRVYTEEVFGPIVTIFRFETEEEGLQIANSTERGLAGYFYSEDVSQ 438
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
+RV +KL+VGM G+NEGIIS EA FGG+KESGLGREGS HG+++FT IKY+C GNL
Sbjct: 439 IFRVARKLEVGMCGVNEGIISTAEAPFGGIKESGLGREGSHHGIDDFTYIKYICVGNL 496
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157107083|ref|XP_001649617.1| succinate semialdehyde dehydrogenase [Aedes aegypti] gi|108879680|gb|EAT43905.1| AAEL004685-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 284/493 (57%), Positives = 373/493 (75%), Gaps = 8/493 (1%)
Query: 21 LQKLCLSTYTQ--AYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
L + C+ + Q A++NG WV + + F V NP N++ + VPDM V D AI +A
Sbjct: 24 LLQRCMHSLRQDKAFVNGHWVGARQGATFEVTNPVNEKVIGTVPDMDVNDANEAIDAAYN 83
Query: 77 AF--EQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVD 134
AF +QW +T KER +LK+W +E N+Q +A IMT ESGKP ESLGE+ Y NSFV+
Sbjct: 84 AFYDKQWHNSTAKERAALLKKWFHLMEENRQEIANIMTAESGKPIPESLGEITYGNSFVE 143
Query: 135 WFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTC 194
WF+EEARR YGE+VP+P+ ++++++ ++P+GV GLITPWNFP AMITRK A A+AAGCT
Sbjct: 144 WFAEEARRIYGEIVPAPMANRQIMLTKQPVGVAGLITPWNFPHAMITRKAAAAIAAGCTV 203
Query: 195 VIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGS 254
VIKPAEDTPLTALAL LA EA PKGV+N+VTSSR NA S+G+LLC S VA ISFTGS
Sbjct: 204 VIKPAEDTPLTALALTKLAEEAGFPKGVINIVTSSRKNAASIGELLCKSEKVAAISFTGS 263
Query: 255 TQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314
T+VG++LY C+ GIKR+ LELGGNAPFIV+ +A+L KAV+GAM +KFRNCGQ C++ANR
Sbjct: 264 TEVGRLLYKQCAHGIKRIGLELGGNAPFIVFDSADLDKAVAGAMNSKFRNCGQTCISANR 323
Query: 315 FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGA 374
FLIQE + D+F+ L +E K+ GD S+ + +GPLIN AQV+KV + V DA KGA
Sbjct: 324 FLIQEGIHDKFIAQL-MERVKALKIGDGSQ-EGIQIGPLINHAQVDKVSNFVDDAKQKGA 381
Query: 375 KVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN 434
+VI GG K++ G+ F+ PTI+T++ DM Y EEVFGPV IKFKTEEE+L +AN +
Sbjct: 382 QVICGGRKLSDKGALFYEPTIVTHLRDDMKLYNEEVFGPVISVIKFKTEEEALKIANGTQ 441
Query: 435 TGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEE 494
GLAGYF++ D++Q +RV + L+ GM+G+NEG+IS EAAFGG+KESG+GREGS+HG++E
Sbjct: 442 RGLAGYFYSTDLNQVFRVSRLLETGMIGVNEGLISCAEAAFGGIKESGIGREGSKHGIDE 501
Query: 495 FTQIKYMCFGNLE 507
+ IKY+C+GNLE
Sbjct: 502 YVYIKYLCYGNLE 514
|
Source: Aedes aegypti Species: Aedes aegypti Genus: Aedes Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|347969394|ref|XP_312856.4| AGAP003165-PA [Anopheles gambiae str. PEST] gi|333468505|gb|EAA08422.4| AGAP003165-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/482 (59%), Positives = 371/482 (76%), Gaps = 6/482 (1%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTT 85
+QAY+NG W+ S F V NPAN L VPDM +DVQ AI +A +AF +W +T
Sbjct: 9 SQAYVNGSWIGARSGATFDVQNPANGAVLGAVPDMARDDVQLAIDAAYDAFYEPRWHNST 68
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145
KER +LK W +E N+Q +A IMT ESGKP ESLGEV Y NSFV+WF+EEARR YG
Sbjct: 69 AKERAALLKNWHALMEKNRQEIASIMTAESGKPLVESLGEVAYGNSFVEWFAEEARRIYG 128
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205
E+VPSPV +++++M R P+GV GLITPWNFP AMITRK A A+AAGCT VIKPAEDTPLT
Sbjct: 129 EIVPSPVANRQIMMTRNPVGVAGLITPWNFPHAMITRKAAAAIAAGCTVVIKPAEDTPLT 188
Query: 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
ALALA LA EA PKGV+NV+TSSRT+A +G+LLC S VA ISFTGST+VGK+LY C
Sbjct: 189 ALALARLAEEAGFPKGVINVITSSRTHAAEIGQLLCGSDKVAAISFTGSTEVGKLLYRQC 248
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
+ G+KR+ LELGGNAPFIV+ +A+++KA++GAM +KFRNCGQ C++ANRFLIQ++V D+F
Sbjct: 249 ADGVKRIGLELGGNAPFIVFKSADMEKALTGAMNSKFRNCGQTCISANRFLIQDEVHDEF 308
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
V L +E + GD S+ D +GPLIN AQ++KVD VQDA KGAKV GG + +
Sbjct: 309 VAKL-IERIRKLAIGDGSR-DGVQIGPLINQAQLKKVDQFVQDAKDKGAKVHTGGKTLPE 366
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
LG ++ PT++T++ +ML Y EEVFGPV ++FKTE E+L +AN + GLAGYFF+ND
Sbjct: 367 LGPLYYEPTVVTDLRDNMLLYNEEVFGPVVSVVRFKTEAEALAIANGTRRGLAGYFFSND 426
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505
++Q +RV ++L+ GM+GINEG+IS TEAAFGG+KESG+GREGSRHG++E+ IKY+C+GN
Sbjct: 427 LNQVFRVARQLETGMIGINEGLISATEAAFGGIKESGIGREGSRHGIDEYVYIKYLCYGN 486
Query: 506 LE 507
L+
Sbjct: 487 LQ 488
|
Source: Anopheles gambiae str. PEST Species: Anopheles gambiae Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|195453876|ref|XP_002073982.1| GK14395 [Drosophila willistoni] gi|194170067|gb|EDW84968.1| GK14395 [Drosophila willistoni] | Back alignment and taxonomy information |
|---|
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 280/497 (56%), Positives = 369/497 (74%), Gaps = 8/497 (1%)
Query: 15 QMHMKYLQKLCLSTYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIM 72
Q+ M ++ +A ING WV SS F V NPA+ E + VPDM VED Q AI
Sbjct: 10 QITMSSIRNFSALVQNKALINGSWVDSSTCATFDVKNPASGEVITSVPDMTVEDAQKAIK 69
Query: 73 SAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYAN 130
+AK+AFE +W T K+R +LK+W K +E + + +AEIMT ESGKP ES GE++Y N
Sbjct: 70 AAKDAFESKEWRSLTGKDRSNLLKKWHKLIEQHTEEIAEIMTAESGKPIAESKGEIIYGN 129
Query: 131 SFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190
SFV+WF+EEARR YGE++PS V ++E++++++P+GV LITPWNFP+AM+TRK A ALAA
Sbjct: 130 SFVEWFAEEARRIYGEVIPSAVNNREIIVMKQPIGVAALITPWNFPLAMVTRKAASALAA 189
Query: 191 GCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250
GCT V+KP+EDTPLTALA+A LA +A IPKGV+NVVT+++ A +G LLC SP V GIS
Sbjct: 190 GCTVVVKPSEDTPLTALAVAKLAEDAGIPKGVINVVTTAK--AAPIGDLLCKSPDVRGIS 247
Query: 251 FTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACV 310
FTGST+VGK+L+ + + GIKR+ LELGGNAPFIV+ +AN++KA+ GAMA+KFRNCGQ CV
Sbjct: 248 FTGSTEVGKLLFRNSADGIKRVGLELGGNAPFIVFDSANIEKAIDGAMASKFRNCGQTCV 307
Query: 311 AANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAI 370
+ANRF +QE V+D+FV LK + +S G+ D +GPLIN Q KV V+DA
Sbjct: 308 SANRFFVQEGVYDKFVSQLKQRV-ESLKIGNGKSCD-VQIGPLINEMQFNKVSGFVEDAR 365
Query: 371 SKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVA 430
SK A ++ GG ++ LGS F+APTI+T++ P YTEEVFGPVA IKFK E E++ A
Sbjct: 366 SKNANIVTGGKGLSSLGSLFYAPTIVTDVPPTAKIYTEEVFGPVASIIKFKDEAEAVQKA 425
Query: 431 NNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRH 490
N++ GLAGYF++ ++ Q +RV K+L+VGMVG+NEGIIS EA FGGVKESG+GREGS H
Sbjct: 426 NDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKESGVGREGSHH 485
Query: 491 GMEEFTQIKYMCFGNLE 507
G++E+ IKY+C GNL+
Sbjct: 486 GIDEYVDIKYICMGNLK 502
|
Source: Drosophila willistoni Species: Drosophila willistoni Genus: Drosophila Family: Drosophilidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|312385184|gb|EFR29742.1| hypothetical protein AND_01074 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 292/483 (60%), Positives = 370/483 (76%), Gaps = 6/483 (1%)
Query: 28 TYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQ 83
T +QA++NG WV +S F V NPAN + L VPDM EDVQ AI SA AF + W
Sbjct: 8 TQSQAFVNGRWVGANSGATFEVQNPANGQVLGVVPDMNREDVQLAIDSAYNAFYEKGWHN 67
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRT 143
+T K+R +LK+W +E N+Q +A IMT ESGKP ESLGE+ Y NSFV+WF+EEARR
Sbjct: 68 STAKDRAALLKKWFALMEKNRQEIASIMTAESGKPLVESLGELTYGNSFVEWFAEEARRI 127
Query: 144 YGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
YGE+VPSPV +++++ R P+GV GLITPWNFP AMITRK A ALAAGCT VIKPAEDTP
Sbjct: 128 YGEIVPSPVAGRQIMLTRNPVGVAGLITPWNFPHAMITRKAAAALAAGCTVVIKPAEDTP 187
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
LTALALA LA EA PKGV+NV+TSSRT+A +G+LLC S VA ISFTGST+VGK+LY
Sbjct: 188 LTALALARLAEEAGFPKGVINVITSSRTHAAEIGQLLCGSDKVAAISFTGSTEVGKLLYR 247
Query: 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
C+ G+KR+ LELGGNAPFIV+ +A+++KAV+GAM +KFRNCGQ C++ANRFLIQ+++ D
Sbjct: 248 QCADGVKRIGLELGGNAPFIVFKSADMEKAVTGAMNSKFRNCGQTCISANRFLIQDEIHD 307
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+FVE L I K I GD S+ + +GPLIN AQ+ KVD V DA KGA V GG +
Sbjct: 308 EFVEKLIERIGKLAI-GDGSR-EGIQIGPLINRAQLTKVDRFVTDAKEKGATVRHGGRTL 365
Query: 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
+ G ++ PT++TN+ DML Y EEVFGPV ++FKTEEE+L +AN + GLAGYFF+
Sbjct: 366 PQHGELYYEPTVVTNLRDDMLLYNEEVFGPVVSVVRFKTEEEALAIANGTRRGLAGYFFS 425
Query: 444 NDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
ND++Q +RV ++L+ GM+GINEG+IS TEAAFGG+KESG+GREGSRHG++E+ IKY+C+
Sbjct: 426 NDLNQVFRVARELETGMIGINEGLISATEAAFGGIKESGVGREGSRHGIDEYVYIKYLCY 485
Query: 504 GNL 506
GNL
Sbjct: 486 GNL 488
|
Source: Anopheles darlingi Species: Anopheles darlingi Genus: Anopheles Family: Culicidae Order: Diptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 507 | ||||||
| FB|FBgn0039349 | 509 | Ssadh "Succinic semialdehyde d | 0.932 | 0.929 | 0.533 | 8.8e-134 | |
| UNIPROTKB|E1BDP3 | 526 | ALDH5A1 "Uncharacterized prote | 0.936 | 0.903 | 0.498 | 8.4e-129 | |
| ZFIN|ZDB-GENE-070228-2 | 514 | aldh5a1 "aldehyde dehydrogenas | 0.932 | 0.920 | 0.496 | 2e-127 | |
| RGD|621422 | 523 | Aldh5a1 "aldehyde dehydrogenas | 0.932 | 0.904 | 0.496 | 4.2e-127 | |
| UNIPROTKB|P51650 | 523 | Aldh5a1 "Succinate-semialdehyd | 0.932 | 0.904 | 0.496 | 4.2e-127 | |
| UNIPROTKB|P51649 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.936 | 0.887 | 0.492 | 5.3e-127 | |
| UNIPROTKB|Q6A2H1 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.936 | 0.887 | 0.492 | 6.8e-127 | |
| UNIPROTKB|Q3MSM3 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.936 | 0.887 | 0.490 | 8.7e-127 | |
| UNIPROTKB|Q6A2H2 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.936 | 0.887 | 0.490 | 8.7e-127 | |
| UNIPROTKB|Q6A2H0 | 535 | ALDH5A1 "Succinate-semialdehyd | 0.936 | 0.887 | 0.492 | 1.4e-126 |
| FB|FBgn0039349 Ssadh "Succinic semialdehyde dehydrogenase" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 257/482 (53%), Positives = 340/482 (70%)
Query: 31 QAYINGEWVHSSKK---FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTT 85
+A ++G WV SS F V NPAN + VP+M V D Q AI +AK+A+E +W T
Sbjct: 30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLT 89
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145
K+R +LK+W K +E + Q +AEIMT ESGKP ES GEV Y N+FV+WF+EEARR YG
Sbjct: 90 AKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAFVEWFAEEARRIYG 149
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXX 205
E+VPS ++E++++++P+GV LITPWNFPMAMITRK ALAAGCT V+K
Sbjct: 150 EIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLT 209
Query: 206 XXXXXXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
IPKGV+NVVT+++ A +G L C SP V GISFTGST+VGK+L+ +
Sbjct: 210 ALAVAKLAVDAGIPKGVINVVTTNK--AAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNS 267
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
+ GIKR+ LELGGNAPFIV+ +A+++KAV GAMA+KFRNCGQ CV+ANRF +Q+ V+D+F
Sbjct: 268 ADGIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKF 327
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
V LK + I GD D +GPLIN Q KV V+DA SK A +ILGG +
Sbjct: 328 VGQLKKRVEALKI-GDGQGCD-VQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPD 385
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
GS F+APTI+T++ P Y+EEVFGPV I+F+ EEE++ AN++ GLAGYF++ +
Sbjct: 386 KGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSEN 445
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505
+ Q +RV K+L+VGMVG+NEGIIS EA FGGVKESG+GREGS+HG++++ IKY+C GN
Sbjct: 446 LQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYICMGN 505
Query: 506 LE 507
L+
Sbjct: 506 LK 507
|
|
| UNIPROTKB|E1BDP3 ALDH5A1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 238/477 (49%), Positives = 327/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T ++ G WV ++ FPV++PA+ L V D GV + + A+ +A EAF W + KER
Sbjct: 52 TDGFVGGLWVSAAATFPVHDPASGAELGLVADCGVPEARAAVRAAYEAFCSWRGVSAKER 111
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA+I+T ESGKP E+ GE++Y+ +F++WFSEEARR YG+++
Sbjct: 112 SSLLRKWYDLMIQNKDDLAKIITAESGKPLKEAQGEILYSANFLEWFSEEARRVYGDIIS 171
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 172 TPAKERRALVLKQPVGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 231
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ S+ A VG+ LCT P V+ ISFTGST GK+L H + +
Sbjct: 232 AELANQAGIPPGVYNVIPCSQKKAKEVGEALCTDPLVSKISFTGSTATGKVLLHHAANSV 291
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG+APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +NRFL+Q + D FV+
Sbjct: 292 KRVSMELGGHAPFIVFDSANVDQAVAGAMASKFRNSGQTCVCSNRFLVQSGIHDSFVKKF 351
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
E K+ + +++ GPLIN VEKV+ V DAISKGA V+ GG K +G
Sbjct: 352 -AEAIKTNLHVGNGFDERTTQGPLINAKAVEKVEKHVSDAISKGATVVTGG-KRHHVGKN 409
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L+N+T DMLC EE FGPVA IKF TEEE++ +AN +N GLAGYF++ D +Q
Sbjct: 410 FFEPTLLSNVTRDMLCSQEETFGPVAPVIKFNTEEEAVAIANAANVGLAGYFYSQDPAQI 469
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+CFG L
Sbjct: 470 WRVAERLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCFGGL 526
|
|
| ZFIN|ZDB-GENE-070228-2 aldh5a1 "aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1251 (445.4 bits), Expect = 2.0e-127, P = 2.0e-127
Identities = 237/477 (49%), Positives = 326/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T+ +I+G WV ++ FPV++PA E +A V D G ++ Q A+ +A +AF W T KER
Sbjct: 41 TEGFIDGRWVSAASSFPVFDPATGEEIAKVSDCGTKEAQDAVNAAHKAFNLWKNHTAKER 100
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
I+L++W + +++ LA+++T E GKP ESLGE+ Y+ SF++WFSEEARR YG++V
Sbjct: 101 SILLRKWFDLIIQHREDLAKLITAECGKPMKESLGEMTYSASFLEWFSEEARRVYGDIVA 160
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K +++L++++P+GV +ITPWNFP AMITRKV ALA GCT V+K
Sbjct: 161 APAKDRKILILKQPVGVASIITPWNFPSAMITRKVGAALAVGCTVVVKPAEDTPLSALAL 220
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NVV SR +VG+LLCT P VA ISFTGST GK+L H + +
Sbjct: 221 AELSVQAGIPAGVFNVVPCSREKTPAVGELLCTDPLVAKISFTGSTATGKVLLRHAAGTV 280
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG+APFIV+ +A++ KAV+GAM +KFRN GQ CV +NRFL+Q + D FVE L
Sbjct: 281 KRVSMELGGHAPFIVFDSADVDKAVAGAMGSKFRNSGQTCVCSNRFLVQTGIHDAFVEKL 340
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ G S+ GPLIN EKV+ V DA+ GA V++ GGK +L
Sbjct: 341 AKTMDAELKLGHGSEPSTTQ-GPLINSRAAEKVEKQVADAVDHGA-VVVRGGK--RLQGS 396
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
F PT+L+N+T DMLC EE FGP+ +KF TE+E+L +AN S GLAGYF++ D++Q
Sbjct: 397 FMEPTLLSNVTSDMLCMREETFGPLIPVVKFNTEQEALAIANASPVGLAGYFYSRDMAQI 456
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++++VGMVG+NEG+IS TEA FGG+K+SGLGREGS +G++E+ +IKYMC G L
Sbjct: 457 WRVAEQMEVGMVGVNEGMISTTEAPFGGIKQSGLGREGSIYGVDEYLEIKYMCLGGL 513
|
|
| RGD|621422 Aldh5a1 "aldehyde dehydrogenase 5 family, member A1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 236/475 (49%), Positives = 324/475 (68%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
+++ G W+ + FPVY+PA+ L V D GV + + A+ +A +AF W + + KER
Sbjct: 51 SFVGGRWLPTPATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERSS 110
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L++W + NK LA+I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++ +
Sbjct: 111 LLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYTS 170
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXX 211
K K L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 171 AKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQ 230
Query: 212 XXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR 271
IP GV NV+ SRT A VG++LCT P V+ ISFTGST GKIL H + +KR
Sbjct: 231 LANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVKR 290
Query: 272 LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331
+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +NRFL+Q + D FV
Sbjct: 291 VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAE 350
Query: 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF 391
+ KS G+ + GPLIN VEKV+ V DA++KGA V+ GG K + G FF
Sbjct: 351 AMKKSLRVGNGFEEGTTQ-GPLINEKAVEKVEKHVNDAVAKGATVVTGG-KRHQSGGNFF 408
Query: 392 APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWR 451
PT+L+N+T DMLC TEE FGPVA IKF EEE++ +AN ++ GLAGYF++ D +Q WR
Sbjct: 409 EPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWR 468
Query: 452 VGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
V ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 469 VAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
|
| UNIPROTKB|P51650 Aldh5a1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1248 (444.4 bits), Expect = 4.2e-127, P = 4.2e-127
Identities = 236/475 (49%), Positives = 324/475 (68%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
+++ G W+ + FPVY+PA+ L V D GV + + A+ +A +AF W + + KER
Sbjct: 51 SFVGGRWLPTPATFPVYDPASGAKLGTVADCGVPEARAAVRAAYDAFSSWKEISVKERSS 110
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L++W + NK LA+I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++ +
Sbjct: 111 LLRKWYDLMIQNKDELAKIITAESGKPLKEAQGEILYSAFFLEWFSEEARRVYGDIIYTS 170
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXXXX 211
K K L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 171 AKDKRGLVLKQPVGVASIITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPYSALALAQ 230
Query: 212 XXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR 271
IP GV NV+ SRT A VG++LCT P V+ ISFTGST GKIL H + +KR
Sbjct: 231 LANQAGIPPGVYNVIPCSRTKAKEVGEVLCTDPLVSKISFTGSTATGKILLHHAANSVKR 290
Query: 272 LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331
+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +NRFL+Q + D FV
Sbjct: 291 VSMELGGLAPFIVFDSANVDQAVAGAMASKFRNAGQTCVCSNRFLVQRGIHDSFVTKFAE 350
Query: 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF 391
+ KS G+ + GPLIN VEKV+ V DA++KGA V+ GG K + G FF
Sbjct: 351 AMKKSLRVGNGFEEGTTQ-GPLINEKAVEKVEKHVNDAVAKGATVVTGG-KRHQSGGNFF 408
Query: 392 APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWR 451
PT+L+N+T DMLC TEE FGPVA IKF EEE++ +AN ++ GLAGYF++ D +Q WR
Sbjct: 409 EPTLLSNVTRDMLCITEETFGPVAPVIKFDKEEEAVAIANAADVGLAGYFYSQDPAQIWR 468
Query: 452 VGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
V ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 469 VAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLEVKYVCYGGL 523
|
|
| UNIPROTKB|P51649 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 235/477 (49%), Positives = 326/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GG K +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVTGG-KRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|Q6A2H1 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Gorilla gorilla gorilla (taxid:9595)] | Back alignment and assigned GO terms |
|---|
Score = 1246 (443.7 bits), Expect = 6.8e-127, P = 6.8e-127
Identities = 235/477 (49%), Positives = 326/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GG K +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVTGG-KRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|Q3MSM3 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Hylobates lar (taxid:9580)] | Back alignment and assigned GO terms |
|---|
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 234/477 (49%), Positives = 325/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GA+A+KFRN GQ CV +NRFL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGALASKFRNTGQTCVCSNRFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA ++ GG K +LG
Sbjct: 361 AEAMKKNLHVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATIVTGG-KRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|Q6A2H2 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Pongo pygmaeus (taxid:9600)] | Back alignment and assigned GO terms |
|---|
Score = 1245 (443.3 bits), Expect = 8.7e-127, P = 8.7e-127
Identities = 234/477 (49%), Positives = 325/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCSWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYXLMIXNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 181 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA ++ GG K +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATIVTGG-KRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFNTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
| UNIPROTKB|Q6A2H0 ALDH5A1 "Succinate-semialdehyde dehydrogenase, mitochondrial" [Pan troglodytes (taxid:9598)] | Back alignment and assigned GO terms |
|---|
Score = 1243 (442.6 bits), Expect = 1.4e-126, P = 1.4e-126
Identities = 235/477 (49%), Positives = 325/477 (68%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 61 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 120
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 121 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIY 180
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKXXXXXXXXXXXX 209
+P K + L++++P GV +ITPWNFP AMITRKV ALAAGCT V+K
Sbjct: 181 TPAKDRRALVLKQPXGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 240
Query: 210 XXXXXXXQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 241 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 300
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 301 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 360
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + GPLIN VEKV+ V DA+SKGA V+ GG K +LG
Sbjct: 361 AEAMKKNLRVGNGFEEGTTQ-GPLINEKAVEKVEKQVNDAVSKGATVVTGG-KRHQLGKN 418
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 419 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 478
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 479 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 535
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q8BWF0 | SSDH_MOUSE | 1, ., 2, ., 1, ., 2, 4 | 0.5210 | 0.9349 | 0.9063 | yes | N/A |
| O24174 | BADH_ORYSJ | 1, ., 2, ., 1, ., 8 | 0.3820 | 0.9092 | 0.9128 | yes | N/A |
| P51649 | SSDH_HUMAN | 1, ., 2, ., 1, ., 2, 4 | 0.5220 | 0.9368 | 0.8878 | yes | N/A |
| Q9US47 | SSDH1_SCHPO | 1, ., 2, ., 1, ., 1, 6 | 0.4689 | 0.9644 | 0.8939 | yes | N/A |
| Q9SAK4 | SSDH_ARATH | 1, ., 2, ., 1, ., 2, 4 | 0.5061 | 0.9191 | 0.8825 | yes | N/A |
| Q6A2H2 | SSDH_PONPY | 1, ., 2, ., 1, ., 2, 4 | 0.5199 | 0.9368 | 0.8878 | N/A | N/A |
| P94428 | GABD_BACSU | 1, ., 2, ., 1, ., 7, 9 | 0.4434 | 0.8934 | 0.9805 | yes | N/A |
| Q6A2H0 | SSDH_PANTR | 1, ., 2, ., 1, ., 2, 4 | 0.5220 | 0.9368 | 0.8878 | yes | N/A |
| Q6A2H1 | SSDH_GORGO | 1, ., 2, ., 1, ., 2, 4 | 0.5220 | 0.9368 | 0.8878 | N/A | N/A |
| Q3MSM4 | SSDH_PANPA | 1, ., 2, ., 1, ., 2, 4 | 0.5220 | 0.9368 | 0.8878 | N/A | N/A |
| P51650 | SSDH_RAT | 1, ., 2, ., 1, ., 2, 4 | 0.5252 | 0.9349 | 0.9063 | yes | N/A |
| Q3MSM3 | SSDH_HYLLA | 1, ., 2, ., 1, ., 2, 4 | 0.5199 | 0.9368 | 0.8878 | N/A | N/A |
| P38067 | UGA2_YEAST | 1, ., 2, ., 1, ., 1, 6 | 0.4568 | 0.9289 | 0.9476 | yes | N/A |
| B9F3B6 | SSDH_ORYSJ | 1, ., 2, ., 1, ., 2, 4 | 0.4968 | 0.9289 | 0.8937 | yes | N/A |
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 507 | |||
| cd07103 | 451 | cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina | 0.0 | |
| PLN02278 | 498 | PLN02278, PLN02278, succinic semialdehyde dehydrog | 0.0 | |
| TIGR01780 | 448 | TIGR01780, SSADH, succinate-semialdehyde dehydroge | 0.0 | |
| pfam00171 | 459 | pfam00171, Aldedh, Aldehyde dehydrogenase family | 0.0 | |
| COG1012 | 472 | COG1012, PutA, NAD-dependent aldehyde dehydrogenas | 0.0 | |
| PRK11241 | 482 | PRK11241, gabD, succinate-semialdehyde dehydrogena | 1e-180 | |
| cd07078 | 432 | cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog | 1e-176 | |
| cd07114 | 457 | cd07114, ALDH_DhaS, Uncharacterized Candidatus pel | 1e-157 | |
| cd07088 | 468 | cd07088, ALDH_LactADH-AldA, Escherichia coli lacta | 1e-156 | |
| cd07091 | 476 | cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH | 1e-151 | |
| cd07138 | 466 | cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox | 1e-148 | |
| cd07104 | 431 | cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P) | 1e-146 | |
| cd07093 | 455 | cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen | 1e-144 | |
| cd07089 | 459 | cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6- | 1e-143 | |
| cd07119 | 482 | cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de | 1e-141 | |
| cd07112 | 462 | cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+ | 1e-140 | |
| cd07150 | 451 | cd07150, ALDH_VaniDH_like, Pseudomonas putida vani | 1e-139 | |
| cd07145 | 456 | cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu | 1e-138 | |
| cd07100 | 429 | cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul | 1e-137 | |
| cd07131 | 478 | cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi | 1e-137 | |
| cd07149 | 453 | cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi | 1e-136 | |
| cd07097 | 473 | cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+ | 1e-136 | |
| cd07110 | 456 | cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy | 1e-135 | |
| cd07106 | 446 | cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac | 1e-131 | |
| cd07144 | 484 | cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi | 1e-131 | |
| cd07109 | 454 | cd07109, ALDH_AAS00426, Uncharacterized Saccharopo | 1e-130 | |
| cd07139 | 471 | cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo | 1e-130 | |
| cd07118 | 454 | cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos | 1e-129 | |
| PRK13473 | 475 | PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd | 1e-129 | |
| cd07090 | 457 | cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy | 1e-127 | |
| cd07120 | 455 | cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al | 1e-126 | |
| cd07115 | 453 | cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens | 1e-126 | |
| cd07099 | 453 | cd07099, ALDH_DDALDH, Methylomonas sp | 1e-125 | |
| cd07086 | 478 | cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha | 1e-124 | |
| PLN02467 | 503 | PLN02467, PLN02467, betaine aldehyde dehydrogenase | 1e-124 | |
| cd07094 | 453 | cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA | 1e-123 | |
| cd07151 | 465 | cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb | 1e-123 | |
| cd07105 | 432 | cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena | 1e-123 | |
| cd07092 | 450 | cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d | 1e-123 | |
| cd07141 | 481 | cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin | 1e-122 | |
| cd07559 | 480 | cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu | 1e-121 | |
| TIGR01804 | 467 | TIGR01804, BADH, glycine betaine aldehyde dehydrog | 1e-120 | |
| cd07117 | 475 | cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo | 1e-119 | |
| cd07147 | 452 | cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f | 1e-118 | |
| cd07142 | 476 | cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen | 1e-117 | |
| cd07082 | 473 | cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph | 1e-115 | |
| cd07111 | 480 | cd07111, ALDH_F16, Aldehyde dehydrogenase family 1 | 1e-114 | |
| PRK13252 | 488 | PRK13252, PRK13252, betaine aldehyde dehydrogenase | 1e-114 | |
| cd07146 | 451 | cd07146, ALDH_PhpJ, Streptomyces putative phosphon | 1e-113 | |
| cd07152 | 443 | cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde | 1e-112 | |
| cd07143 | 481 | cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al | 1e-111 | |
| cd07108 | 457 | cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d | 1e-111 | |
| TIGR02299 | 488 | TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate | 1e-110 | |
| PRK09847 | 494 | PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty | 1e-108 | |
| TIGR03216 | 481 | TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia | 1e-106 | |
| cd07113 | 477 | cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep | 1e-106 | |
| PLN02766 | 501 | PLN02766, PLN02766, coniferyl-aldehyde dehydrogena | 1e-105 | |
| PRK09407 | 524 | PRK09407, gabD2, succinic semialdehyde dehydrogena | 1e-105 | |
| cd07140 | 486 | cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate | 1e-104 | |
| PLN02466 | 538 | PLN02466, PLN02466, aldehyde dehydrogenase family | 1e-104 | |
| cd07101 | 454 | cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul | 1e-103 | |
| cd07107 | 456 | cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben | 1e-103 | |
| cd07085 | 478 | cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd | 1e-103 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 1e-100 | |
| cd07102 | 452 | cd07102, ALDH_EDX86601, Uncharacterized aldehyde d | 3e-98 | |
| cd07124 | 512 | cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline- | 4e-98 | |
| TIGR03374 | 472 | TIGR03374, ABALDH, 1-pyrroline dehydrogenase | 3e-96 | |
| PRK10090 | 409 | PRK10090, PRK10090, aldehyde dehydrogenase A; Prov | 9e-96 | |
| TIGR04284 | 480 | TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, | 6e-93 | |
| cd07116 | 479 | cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD | 4e-92 | |
| PRK09406 | 457 | PRK09406, gabD1, succinic semialdehyde dehydrogena | 1e-91 | |
| cd07098 | 465 | cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil | 7e-90 | |
| PRK13968 | 462 | PRK13968, PRK13968, putative succinate semialdehyd | 1e-89 | |
| TIGR03250 | 472 | TIGR03250, PhnAcAld_DH, putative phosphonoacetalde | 7e-87 | |
| PRK03137 | 514 | PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy | 4e-84 | |
| cd07130 | 474 | cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin | 1e-81 | |
| TIGR01722 | 477 | TIGR01722, MMSDH, methylmalonic acid semialdehyde | 1e-74 | |
| cd07148 | 455 | cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031 | 4e-74 | |
| TIGR01237 | 511 | TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb | 2e-73 | |
| cd07087 | 426 | cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: | 2e-70 | |
| cd07134 | 433 | cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy | 1e-68 | |
| cd07095 | 431 | cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem | 5e-67 | |
| PLN00412 | 496 | PLN00412, PLN00412, NADP-dependent glyceraldehyde- | 2e-65 | |
| cd07125 | 518 | cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car | 6e-65 | |
| cd07135 | 436 | cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia | 7e-65 | |
| cd07083 | 500 | cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent | 8e-65 | |
| PLN02419 | 604 | PLN02419, PLN02419, methylmalonate-semialdehyde de | 5e-61 | |
| TIGR03240 | 484 | TIGR03240, arg_catab_astD, succinylglutamic semial | 2e-59 | |
| PTZ00381 | 493 | PTZ00381, PTZ00381, aldehyde dehydrogenase family | 3e-58 | |
| PLN02315 | 508 | PLN02315, PLN02315, aldehyde dehydrogenase family | 5e-58 | |
| cd07133 | 434 | cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd | 6e-58 | |
| PRK09457 | 487 | PRK09457, astD, succinylglutamic semialdehyde dehy | 4e-57 | |
| cd07136 | 449 | cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh | 7e-57 | |
| TIGR01238 | 500 | TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb | 6e-54 | |
| PRK11905 | 1208 | PRK11905, PRK11905, bifunctional proline dehydroge | 3e-53 | |
| COG4230 | 769 | COG4230, COG4230, Delta 1-pyrroline-5-carboxylate | 1e-51 | |
| PRK11904 | 1038 | PRK11904, PRK11904, bifunctional proline dehydroge | 3e-49 | |
| cd07132 | 443 | cd07132, ALDH_F3AB, Aldehyde dehydrogenase family | 6e-48 | |
| cd07137 | 432 | cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase | 2e-47 | |
| PRK11809 | 1318 | PRK11809, putA, trifunctional transcriptional regu | 1e-45 | |
| PLN02203 | 484 | PLN02203, PLN02203, aldehyde dehydrogenase | 4e-43 | |
| TIGR01236 | 532 | TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb | 3e-35 | |
| cd06534 | 367 | cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd | 2e-34 | |
| PLN02174 | 484 | PLN02174, PLN02174, aldehyde dehydrogenase family | 2e-34 | |
| cd07128 | 513 | cd07128, ALDH_MaoC-N, N-terminal domain of the mon | 5e-28 | |
| cd07123 | 522 | cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca | 6e-28 | |
| cd07084 | 442 | cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+ | 2e-25 | |
| TIGR02278 | 663 | TIGR02278, PaaN-DH, phenylacetic acid degradation | 6e-24 | |
| cd07129 | 454 | cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh | 1e-23 | |
| PRK11903 | 521 | PRK11903, PRK11903, aldehyde dehydrogenase; Provis | 2e-22 | |
| PRK11563 | 675 | PRK11563, PRK11563, bifunctional aldehyde dehydrog | 3e-20 | |
| cd07126 | 489 | cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb | 4e-11 | |
| cd07077 | 397 | cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh | 4e-10 | |
| TIGR02288 | 551 | TIGR02288, PaaN_2, phenylacetic acid degradation p | 3e-08 | |
| cd07127 | 549 | cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat | 3e-07 | |
| TIGR02518 | 488 | TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase ( | 8e-07 | |
| PRK15398 | 465 | PRK15398, PRK15398, aldehyde dehydrogenase EutE; P | 3e-05 | |
| cd07121 | 429 | cd07121, ALDH_EutE, Ethanolamine utilization prote | 6e-04 | |
| cd07122 | 436 | cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh | 0.001 | |
| cd07081 | 439 | cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla | 0.002 |
| >gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Score = 723 bits (1869), Expect = 0.0
Identities = 249/457 (54%), Positives = 326/457 (71%), Gaps = 6/457 (1%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NPA E + +VPD G D AI +A AF+ W +TT +ER +L+RW + +
Sbjct: 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAED 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGV 166
LA ++T E GKP E+ GEV YA SF++WF+EEARR YG +PSP K +L++++P+GV
Sbjct: 61 LARLLTLEQGKPLAEARGEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV 120
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226
V ITPWNFP AMITRK+APALAAGCT V+KPAE+TPL+ALALA LA EA +P GVLNVV
Sbjct: 121 VAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVV 180
Query: 227 TSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286
T S +G+ LC SP V ISFTGST VGK+L + + +KR+SLELGGNAPFIV+
Sbjct: 181 TGS---PAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFD 237
Query: 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346
+A+L KAV GA+A+KFRN GQ CV ANR + E ++D+FVE L VE K G+ ++
Sbjct: 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKL-VERVKKLKVGN-GLDE 295
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCY 406
++GPLIN VEKV+++V+DA++KGAKV+ GG ++ LG F+ PT+LT++T DML
Sbjct: 296 GTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLG-LGGYFYEPTVLTDVTDDMLIM 354
Query: 407 TEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG 466
EE FGPVA I F TE+E + AN++ GLA Y FT D+++AWRV + L+ GMVGIN G
Sbjct: 355 NEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTG 414
Query: 467 IISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+IS EA FGGVKESGLGREG + G+EE+ + KY+
Sbjct: 415 LISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVSL 451
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451 |
| >gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 645 bits (1667), Expect = 0.0
Identities = 259/479 (54%), Positives = 346/479 (72%), Gaps = 8/479 (1%)
Query: 30 TQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
TQ I G+W + K FPVYNPA E +A+VP MG + AI SA +AF WS+ T
Sbjct: 25 TQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTAS 84
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER +L+RW + NK+ LA++MT E GKP E++GEV Y SF+++F+EEA+R YG++
Sbjct: 85 ERSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDI 144
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+PSP + LL++++P+GVVG ITPWNFP+AMITRKV PALAAGCT V+KP+E TPLTAL
Sbjct: 145 IPSPFPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTAL 204
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
A A LA +A IP GVLNVV +A +G L SP V I+FTGST VGK L + +
Sbjct: 205 AAAELALQAGIPPGVLNVVMG---DAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAA 261
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+KR+SLELGGNAPFIV+ +A+L AV GA+A+KFRN GQ CV ANR L+QE ++D+F E
Sbjct: 262 TVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAE 321
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
+ + + GD + + GPLIN A V+KV+S VQDA+SKGAKV+LGG + + LG
Sbjct: 322 AFSKAV-QKLVVGDGFE-EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHS-LG 378
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
F+ PT+L ++T DML + EEVFGPVA +FKTEEE++ +AN++ GLA Y FT D+
Sbjct: 379 GTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQ 438
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
+AWRV + L+ G+VG+NEG+IS A FGGVK+SGLGREGS++G++E+ +IKY+C GN+
Sbjct: 439 RAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEYLEIKYVCLGNM 497
|
Length = 498 |
| >gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 593 bits (1530), Expect = 0.0
Identities = 243/453 (53%), Positives = 319/453 (70%), Gaps = 5/453 (1%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
VYNPA E + VPD GV++ + AI +A EAF+ W TT KER +L++W + NK
Sbjct: 1 VYNPATGEIIGSVPDQGVDETEAAIRAAYEAFKTWRATTAKERSSLLRKWYNLMMENKDD 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGV 166
LA ++T E+GKP E+ GE++YA SF++WF+EEA+R YG+ +PSP K L+++++P+GV
Sbjct: 61 LARLITLENGKPLKEAKGEILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGV 120
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226
ITPWNFP AMITRK ALAAGCT V+KPAE TPL+ALALA LA +A IPKGVLNV+
Sbjct: 121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVI 180
Query: 227 TSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286
T SR VG +L TSP V ISFTGST VGKIL + +K++S+ELGGNAPFIV+
Sbjct: 181 TGSRAKE--VGNVLTTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238
Query: 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346
+A+L +AV GAMA+KFRN GQ CV ANR + + ++D+F + L E K G+
Sbjct: 239 DADLDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKL-AEAVKKLKVGNGLDE- 296
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCY 406
GPLIN VEKV+ + DA+ KGAKV+ GGK +LG FF PT+L+N+T DML
Sbjct: 297 GVTQGPLINEKAVEKVEKHIADAVEKGAKVVT-GGKRHELGGNFFEPTVLSNVTADMLVS 355
Query: 407 TEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG 466
EE FGP+A KF EEE + +AN++ GLA YFF+ D+S+ WRV + L+ GMVGIN G
Sbjct: 356 KEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYGMVGINTG 415
Query: 467 IISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+IS+ A FGGVK+SGLGREGS++G+EE+ + K
Sbjct: 416 LISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448
|
Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448 |
| >gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 562 bits (1450), Expect = 0.0
Identities = 213/464 (45%), Positives = 290/464 (62%), Gaps = 9/464 (1%)
Query: 38 WVHS-SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRW 96
WV S S+ V NPA E +A VP EDV A+ +A+ AF+ W++T P ER +L +
Sbjct: 1 WVDSSSETIEVINPATGEVIATVPAATAEDVDAAVAAARAAFKAWAKTPPSERAAILLKA 60
Query: 97 LKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKE 156
LE + LAE+ T E+GKP E+ GEV A + +++ AR+ GE +PS
Sbjct: 61 ADLLEERRDELAELETLETGKPLAEARGEVPRAIDTLRYYAGLARKLEGETLPSD-PGVL 119
Query: 157 LLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216
REPLGVVG ITPWNFP+ + K+APALAAG T V+KP+E TPLTAL LA L EA
Sbjct: 120 AYTRREPLGVVGAITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEA 179
Query: 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL 276
+P GVLNVVT S + VG L P V +SFTGST+VG+ + ++ +KR++LEL
Sbjct: 180 GLPPGVLNVVTGS---GSEVGDALVEHPDVDKVSFTGSTEVGRRIAKAAAKNLKRVTLEL 236
Query: 277 GGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336
GG P IV+ +A+L AV GA+ F N GQ C A +R L+ E ++D+FVE L VE KS
Sbjct: 237 GGKNPLIVFDDADLDAAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERL-VEAAKS 295
Query: 337 FIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTIL 396
GD + ++GPLI+ Q E+V S ++DA +GAK++ GG + G F PT+L
Sbjct: 296 LKVGD-PLDPDTDIGPLISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGY-FVEPTVL 353
Query: 397 TNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456
++TPDM EE+FGPV I FK E+E++ +AN++ GLA FTND+ +A RV ++L
Sbjct: 354 ADVTPDMRIAQEEIFGPVLSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRL 413
Query: 457 QVGMVGINEGIISHTEAA-FGGVKESGLGREGSRHGMEEFTQIK 499
+ GMV IN+ EA FGG K+SG GREG + G+EE+T+ K
Sbjct: 414 EAGMVWINDYTTGDPEALPFGGFKQSGFGREGGKEGLEEYTETK 457
|
This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459 |
| >gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 542 bits (1399), Expect = 0.0
Identities = 218/475 (45%), Positives = 307/475 (64%), Gaps = 11/475 (2%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
+ I+GEWV + V NPA E +A VP EDV A+ +A+ AFE WS+ + +ER
Sbjct: 1 YKLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEER 60
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L+R LE + LA ++T E+GKP +E+ GE+ A F+ +++EEARR GE +P
Sbjct: 61 AAILRRIADLLEARAEELAALITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIP 120
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+ K + L+ REPLGVVG ITPWNFP+A+ K+APALAAG T V+KP+E TPL+ALAL
Sbjct: 121 TD-KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALAL 179
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA EA +P GVLNVVT VG L P V ISFTGST VG+ + + + +
Sbjct: 180 AELAAEAGLPAGVLNVVTGGGA---EVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANL 236
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
K ++LELGG +P IV +A+L AV A+ F N GQ C AA+R ++ E V+D+FVE L
Sbjct: 237 KPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERL 296
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
V S GD + +LGPLI+ Q+++V+ ++DA+++GA+++ GG + G
Sbjct: 297 -VARAASLKVGD-PLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGK---RPGGY 351
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
F PTIL +TPDM EE+FGPV I+FK EEE++ +AN++ GLA FT D+++A
Sbjct: 352 FVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARA 411
Query: 450 WRVGKKLQVGMVGINEGIISHTE--AAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+RV ++L+ GMVGIN+ FGGVK+SGLGREG ++G+EEFT++K +
Sbjct: 412 FRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVT 466
|
Length = 472 |
| >gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Score = 513 bits (1323), Expect = e-180
Identities = 235/476 (49%), Positives = 321/476 (67%), Gaps = 8/476 (1%)
Query: 31 QAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
QA INGEW+ ++ + V NPAN + L VP MG ++ + AI +A A W T KE
Sbjct: 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKE 71
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+RW + ++ LA +MT E GKP E+ GE+ YA SF++WF+EE +R YG+ +
Sbjct: 72 RANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTI 131
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
P K L+++++P+GV ITPWNFP AMITRK PALAAGCT V+KPA TP +ALA
Sbjct: 132 PGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALA 191
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
LA LA A IP GV NVVT S A +VG L ++P V +SFTGST++G+ L C++
Sbjct: 192 LAELAIRAGIPAGVFNVVTGS---AGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
IK++SLELGGNAPFIV+ +A+L KAV GA+A+KFRN GQ CV ANR +Q+ V+D+F E
Sbjct: 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK 308
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L+ ++K I GD +GPLI+ V KV+ + DA+ KGA+V+ GGK +LG
Sbjct: 309 LQQAVSKLHI-GD-GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVC-GGKAHELGG 365
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
FF PTIL ++ + EE FGP+A +FK E + + AN++ GLA YF+ D+S+
Sbjct: 366 NFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSR 425
Query: 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+RVG+ L+ G+VGIN GIIS+ A FGG+K SGLGREGS++G+E++ +IKYMC G
Sbjct: 426 VFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481
|
Length = 482 |
| >gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Score = 503 bits (1297), Expect = e-176
Identities = 196/433 (45%), Positives = 281/433 (64%), Gaps = 6/433 (1%)
Query: 68 QYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127
A+ +A+ AF+ W+ P ER +L++ LE ++ LA + T E+GKP E+LGEV
Sbjct: 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVA 60
Query: 128 YANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187
A +++ ARR +GE++PSP + ++ REPLGVVG ITPWNFP+ + K+APA
Sbjct: 61 RAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPA 120
Query: 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVA 247
LAAG T V+KP+E TPLTAL LA L EA +P GVLNVVT + VG L + P V
Sbjct: 121 LAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGD---GDEVGAALASHPRVD 177
Query: 248 GISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQ 307
ISFTGST VGK + ++ +KR++LELGG +P IV+ +A+L AV GA+ F N GQ
Sbjct: 178 KISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQ 237
Query: 308 ACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367
C AA+R L+ E ++D+FVE L VE K+ G+ ++GPLI+ AQ+++V + ++
Sbjct: 238 VCTAASRLLVHESIYDEFVERL-VERVKALKVGNPLD-PDTDMGPLISAAQLDRVLAYIE 295
Query: 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427
DA ++GAK++ GG ++ F PT+LT++ PDM EE+FGPV I FK EEE++
Sbjct: 296 DAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAI 355
Query: 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGRE 486
+AN++ GLA FT D+ +A RV ++L+ G V IN+ + A FGGVK+SG+GRE
Sbjct: 356 ELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVGAEPSAPFGGVKQSGIGRE 415
Query: 487 GSRHGMEEFTQIK 499
G +G+EE+T+ K
Sbjct: 416 GGPYGLEEYTEPK 428
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432 |
| >gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Score = 454 bits (1171), Expect = e-157
Identities = 182/458 (39%), Positives = 265/458 (57%), Gaps = 10/458 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNK 104
NPA E A VP+ DV A+ +A+ AFE W + TP ERG +L+R +E N
Sbjct: 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANA 60
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL 164
+ LAE+ T+++GK E+ +V Y + +++ A + G ++P REPL
Sbjct: 61 EELAELETRDNGKLIRETRAQVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPL 120
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224
GVV ITPWN P+ ++ +K+APALAAG T V+KP+E TP + L LA LA EA P GV+N
Sbjct: 121 GVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVN 180
Query: 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284
VVT G+ L P VA I+FTG T+ G+ + ++ + ++LELGG +P IV
Sbjct: 181 VVTG---FGPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIV 237
Query: 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
+ +A+L AV+G +A F GQ CVA +R L+Q ++D+FVE L V ++ GD
Sbjct: 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERL-VARARAIRVGD-PL 295
Query: 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK---FFAPTILTNITP 401
+ + +GPL Q+EKV+ V A +GA+V+ GG + + FF PTIL ++T
Sbjct: 296 DPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTN 355
Query: 402 DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMV 461
DM EEVFGPV I F EEE++ +AN+S GLA +T D+++A RV + ++ G V
Sbjct: 356 DMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTV 415
Query: 462 GINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+N + FGG K+SG+GRE + E+TQ K
Sbjct: 416 WVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTK 453
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457 |
| >gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 452 bits (1166), Expect = e-156
Identities = 184/472 (38%), Positives = 274/472 (58%), Gaps = 13/472 (2%)
Query: 33 YINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YINGE+V SS + V NPA E +A VP ED A+ +A+ A + W + ER
Sbjct: 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERA 60
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
L++ + N LA+++ +E GK + + EV + ++D+ +E ARR GE++PS
Sbjct: 61 AYLRKLADLIRENADELAKLIVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPS 120
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
++ + + + P+GVV I PWNFP +I RK+APAL G T VIKP+E+TPL AL A
Sbjct: 121 DRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFA 180
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
L EA +P GVLN+VT + VG L P V IS TGST+ G+ + ++ I
Sbjct: 181 ELVDEAGLPAGVLNIVTGR---GSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENIT 237
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
++SLELGG AP IV +A+L AV + ++ NCGQ C A R + E ++D+F+E L
Sbjct: 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKL- 296
Query: 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF 390
VE K+ GD + ++GPL+N A ++KV+ +V+ A+ GA ++ GG + F
Sbjct: 297 VEKMKAVKVGD-PFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYF 355
Query: 391 FAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450
+ PT+LTN+ DM EE+FGPV +KF + +E++ +AN+S GL Y +T +++ A
Sbjct: 356 YEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAM 415
Query: 451 RVGKKLQVGMVGINEGIISHTEAAFG---GVKESGLGREGSRHGMEEFTQIK 499
R +L+ G IN + EA G G K+SGLG +HG+EE+ Q K
Sbjct: 416 RATNELEFGETYINRE---NFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTK 464
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468 |
| >gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Score = 440 bits (1134), Expect = e-151
Identities = 186/479 (38%), Positives = 275/479 (57%), Gaps = 19/479 (3%)
Query: 30 TQAYINGEWVHS--SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS--QTT 85
T +IN E+V S K FP NPA +E + V + EDV A+ +A+ AFE +
Sbjct: 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMD 63
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTY 144
P+ERG +L + +E ++ LA + + ++GKP ES G+V + + +++ A +
Sbjct: 64 PRERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQ 123
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
G+ +P + REP+GV G I PWNFP+ M+ K+APALAAG T V+KPAE TPL
Sbjct: 124 GKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPL 182
Query: 205 TALALAALAHEAQIPKGVLNVVTSS-RTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
+AL LA L EA P GV+N+V T G + + V I+FTGST VG+ +
Sbjct: 183 SALYLAELIKEAGFPPGVVNIVPGFGPT----AGAAISSHMDVDKIAFTGSTAVGRTIME 238
Query: 264 HCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
++ +K+++LELGG +P IV+ +A+L KAV A F N GQ C A +R +QE ++
Sbjct: 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY 298
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE K + + GD + GP ++ AQ +K+ S ++ +GA ++ GG +
Sbjct: 299 DEFVEKFK-ARAEKRVVGD-PFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGER 356
Query: 383 VTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
GSK F PT+ T++ DM EE+FGPV +KFKTE+E + AN++ GLA
Sbjct: 357 H---GSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAG 413
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT DI++A RV + L+ G V +N + FGG K+SG GRE G+EE+TQ+K
Sbjct: 414 VFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVK 472
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476 |
| >gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Score = 431 bits (1111), Expect = e-148
Identities = 185/479 (38%), Positives = 270/479 (56%), Gaps = 30/479 (6%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YI+G WV ++ V NPA +E + VP DV A+ +A+ AF WS T+ +ER
Sbjct: 2 YIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERA 61
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTES--------LGEVVYANSFVDWFSEEARR 142
+L+R + E LA+ +T E G P T + +G + A + F E RR
Sbjct: 62 ALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERR 121
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
LV VREP+GV GLITPWN+P+ I KVAPALAAGCT V+KP+E
Sbjct: 122 G-NSLV-----------VREPIGVCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVA 169
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PL+A+ LA + EA +P GV N+V VG+ L P V +SFTGST+ GK +
Sbjct: 170 PLSAIILAEILDEAGLPAGVFNLVNGD---GPVVGEALSAHPDVDMVSFTGSTRAGKRVA 226
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ +KR++LELGG + I+ +A+L+KAV +AA F N GQ+C A R L+ +
Sbjct: 227 EAAADTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY 286
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG-G 381
+ E+ ++++ GD LGPL + AQ ++V +Q I +GA+++ GG G
Sbjct: 287 AEAEEIAA-AAAEAYVVGDPRD-PATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPG 344
Query: 382 KVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
+ L +F PT+ ++TPDM EE+FGPV I + E+E++ +AN++ GLAGY
Sbjct: 345 RPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGY 404
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
++ D +A V ++L+ G V IN G + A FGG K+SG GRE R+G+EEF ++K
Sbjct: 405 VWSADPERARAVARRLRAGQVHIN-GAAFNPGAPFGGYKQSGNGREWGRYGLEEFLEVK 462
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466 |
| >gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 426 bits (1097), Expect = e-146
Identities = 181/438 (41%), Positives = 266/438 (60%), Gaps = 11/438 (2%)
Query: 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE 125
DV A +A A + W+ T P+ER +L++ + LE + +A+ + +ESG ++ E
Sbjct: 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFE 60
Query: 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185
V A + + + RR GE++PS V KE ++ R PLGVVG+I+P+NFP+ + R VA
Sbjct: 61 VGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVA 120
Query: 186 PALAAGCTCVIKPAEDTPLT-ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSP 244
PALA G V+KP TP+T L +A + EA +PKGVLNVV + +G L P
Sbjct: 121 PALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVP---GGGSEIGDALVEHP 177
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304
V ISFTGST VG+ + + +K+++LELGGN P IV +A+L AVS A F +
Sbjct: 178 RVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLH 237
Query: 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364
GQ C+AA R L+ E V+D+FVE L V K+ GD D +GPLIN QV++V +
Sbjct: 238 QGQICMAAGRILVHESVYDEFVEKL-VAKAKALPVGDPRDPD-TVIGPLINERQVDRVHA 295
Query: 365 IVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424
IV+DA++ GA++ L GG L F+ PT+L+++TPDM + EE+FGPVA I F +E
Sbjct: 296 IVEDAVAAGARL-LTGGTYEGL---FYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDE 351
Query: 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH-TEAAFGGVKESGL 483
E++ +AN++ GL+ FT D+ +A ++L+ GMV IN+ ++ FGGVK SG
Sbjct: 352 EAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVNDEPHVPFGGVKASGG 411
Query: 484 GREGSRHGMEEFTQIKYM 501
GR G +EEFT+ +++
Sbjct: 412 GRFGGPASLEEFTEWQWI 429
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431 |
| >gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Score = 422 bits (1088), Expect = e-144
Identities = 181/461 (39%), Positives = 272/461 (59%), Gaps = 12/461 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
+NPA E LA VP+ G +V A+ +AKEAF WS+ +P ER +L + +E
Sbjct: 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADE 60
Query: 107 LAEIMTQESGKPPTESLGEVV--YANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL 164
LA + + ++GKP T + + A +F +F++ + GE P + ++R+P+
Sbjct: 61 LALLESLDTGKPITLARTRDIPRAAANF-RFFADYILQLDGESYPQDGGALNY-VLRQPV 118
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224
GV GLITPWN P+ ++T K+APALA G T V+KP+E TPLTA LA LA+EA +P GV+N
Sbjct: 119 GVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVN 178
Query: 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284
VV A G L P V ISFTG T G+ + + +K +SLELGG P IV
Sbjct: 179 VVHGFGPEA---GAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIV 235
Query: 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
+++A+L +AV A+ + F N G+ C+A +R L+Q ++D+F+E VE K+ GD
Sbjct: 236 FADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERF-VERAKALKVGDPLD 294
Query: 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK---FFAPTILTNITP 401
D +GPLI+ +EKV V+ A ++GA ++ GGG+ + F PT++T +
Sbjct: 295 PDT-EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDN 353
Query: 402 DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMV 461
D EE+FGPV I F EEE++ +AN++ GLA Y +T D+ +A RV ++L+ G V
Sbjct: 354 DSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTV 413
Query: 462 GINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+N ++ FGGVK SG+GREG + +E +T++K +C
Sbjct: 414 WVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVC 454
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455 |
| >gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Score = 418 bits (1076), Expect = e-143
Identities = 174/467 (37%), Positives = 258/467 (55%), Gaps = 26/467 (5%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS-QTTPKERGIVLKRWLKELEGNKQ 105
V NPA +E + PD G DV AI +A+ AF+ T +ER L++ + LE K+
Sbjct: 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKE 60
Query: 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS-------PVKSKEL- 157
L ++ E G P V+ A + R + +L S PV +
Sbjct: 61 ELRALLVAEVGAP-------VMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGG 113
Query: 158 ----LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALA 213
++ REP+GVV ITPWNFP + K+APALAAG T V+KPA DTPL+AL L +
Sbjct: 114 PGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEII 173
Query: 214 HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLS 273
E +P GV+NVVT S N+VG+ L T P V +SFTGST VG+ + + + +KR+
Sbjct: 174 AETDLPAGVVNVVTGS---DNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVL 230
Query: 274 LELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI 333
LELGG + IV +A+L A A+ N GQ C R L+ +D+ VE L
Sbjct: 231 LELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALA-AA 289
Query: 334 TKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF-A 392
++ GD + +GPLI+ AQ ++V+ + +GA+++ GGG+ L F+
Sbjct: 290 FEALPVGDPADPGT-VMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVE 348
Query: 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRV 452
PT+ ++ DM EE+FGPV V I + ++E++ +AN+S+ GL+G ++ D+ +A+RV
Sbjct: 349 PTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRV 408
Query: 453 GKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
++++ G VGIN G +A FGG K+SGLGRE G+EEF + K
Sbjct: 409 ARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETK 455
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459 |
| >gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 415 bits (1069), Expect = e-141
Identities = 187/476 (39%), Positives = 273/476 (57%), Gaps = 17/476 (3%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKE 88
YI+GEWV S K + NPAN E +A VP+ ED + AI +A+ AF+ W +E
Sbjct: 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQE 60
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L R ++ + + LA + T +GK ES ++ + +++ A + GE+
Sbjct: 61 RAALLFRIADKIREDAEELARLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVY 120
Query: 149 PSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
P V S+ VREP+GV GLITPWN+P+ K+APALAAG T VIKP+E TPLT
Sbjct: 121 DVPPHVISR---TVREPVGVCGLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTT 177
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
+AL L EA +P GV+N+VT S +VG L SP V +SFTG T G+ + +
Sbjct: 178 IALFELIEEAGLPAGVVNLVTGS---GATVGAELAESPDVDLVSFTGGTATGRSIMRAAA 234
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
+K+++LELGG P IV+++A+ + AV A+ F N GQ C A +R L++E + D+FV
Sbjct: 235 GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFV 294
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
L E K G+ D +GPL++ EKV S +Q +GA+++ GG + T
Sbjct: 295 AAL-AERAKKIKLGNGLDADT-EMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGD 352
Query: 387 GSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
F PTI ++ M EE+FGPV +F TEEE++ +AN++ GLAG +T
Sbjct: 353 ELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWT 412
Query: 444 NDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
DI++A RV ++L+ G V IN+ EA +GG K+SG+GRE G+EE+ + K
Sbjct: 413 KDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETK 468
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482 |
| >gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Score = 412 bits (1061), Expect = e-140
Identities = 184/467 (39%), Positives = 276/467 (59%), Gaps = 20/467 (4%)
Query: 43 KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKEL 100
+ F NPA LA+V DV A+ +A+ AFE WS+ +P ER VL R +
Sbjct: 2 ETFATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLI 61
Query: 101 EGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKEL-L 158
E ++ LA + T + GKP +++L +V A + W++E + YGE+ P+ L L
Sbjct: 62 EAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTG--PDALAL 119
Query: 159 MVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI 218
+ REPLGVVG + PWNFP+ M K+APALAAG + V+KPAE +PLTAL LA LA EA +
Sbjct: 120 ITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGL 179
Query: 219 PKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG-IKRLSLELG 277
P GVLNVV ++ G+ L V ++FTGST+VG+ + Q +KR+ LE G
Sbjct: 180 PAGVLNVVPGF---GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECG 236
Query: 278 GNAPFIVYSNA-NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336
G +P IV+++A +L A A A F N G+ C A +R L+ E + D+F+E + V +
Sbjct: 237 GKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKV-VAAARE 295
Query: 337 FIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA-PTI 395
+ GD + +G L++ A +KV ++ ++GA+++ GG +V FF PT+
Sbjct: 296 WKPGD-PLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTV 354
Query: 396 LTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKK 455
+TPDM EE+FGPV I F +EEE++ +AN+S GLA +T+D+S+A RV ++
Sbjct: 355 FDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARR 414
Query: 456 LQVGMVGIN---EGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
L+ G V +N EG I+ FGG K+SG GR+ S H ++++T++K
Sbjct: 415 LRAGTVWVNCFDEGDIT---TPFGGFKQSGNGRDKSLHALDKYTELK 458
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462 |
| >gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Score = 409 bits (1053), Expect = e-139
Identities = 181/458 (39%), Positives = 267/458 (58%), Gaps = 12/458 (2%)
Query: 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
F NPA+ A V +D + AI +A +AF W+ TTP ER +L + + +E
Sbjct: 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRA 60
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL 164
L +++ E G ++ E + + + E RR GE +PS + VR PL
Sbjct: 61 DDLIDLLIDEGGSTYGKAWFETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPL 120
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224
GVV ITP+N+P+ + T+KVA ALAAG T V+KP+E+TP+ L +A + EA +PKGV N
Sbjct: 121 GVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFN 180
Query: 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284
VVT VG L P V ++FTGST VG+ + + +K+++LELGG P IV
Sbjct: 181 VVTGGGA---EVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIV 237
Query: 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
++A+L AV A F + GQ C++A+R +++E V+D+FV+ V GD
Sbjct: 238 LADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKF-VARASKLKVGDPR- 295
Query: 345 NDKCN-LGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM 403
D +GPLI+ QVE++ V+DA++KGAK++ GG K F+ PT+LT++TPDM
Sbjct: 296 -DPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGG----KYDGNFYQPTVLTDVTPDM 350
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
+ EE FGPV I K EE+L +AN++ GL+ TND+ +A+++ ++L+ GMV I
Sbjct: 351 RIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHI 410
Query: 464 NEG-IISHTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500
N+ I+ FGGVK SG GREG MEEFT++K+
Sbjct: 411 NDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKW 448
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451 |
| >gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 405 bits (1043), Expect = e-138
Identities = 189/461 (40%), Positives = 280/461 (60%), Gaps = 13/461 (2%)
Query: 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
V NPAN E + VP + E+V+ AI A++A + S +R +L + + +E K
Sbjct: 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRK 60
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS---PVKSKELLM-V 160
+ LA+++T E GKP +S EV +EEA+ GE +P + + V
Sbjct: 61 EELAKLLTIEVGKPIKQSRVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTV 120
Query: 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK 220
REP+GVVG ITP+NFP + K+APA+A G + V+KP+ +TPLTA+ LA + EA +P
Sbjct: 121 REPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPP 180
Query: 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280
GV+NVVT + VG + T+P V ISFTGST VG ++ S K+++LELGG+
Sbjct: 181 GVINVVTG---YGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSD 237
Query: 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340
P IV +A+L++AVS A+ +F N GQ C A R L++E+V+D+F+++L VE K G
Sbjct: 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLL-VEKVKKLKVG 296
Query: 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
D ++ +LGPLI+ VE+++++V DA+ KG K++ GG + FF PT+L N T
Sbjct: 297 D-PLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD---EGSFFPPTVLENDT 352
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
PDM+ EEVFGPV K K +EE++ +AN++ GL FTNDI++A +V ++L+ G
Sbjct: 353 PDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGG 412
Query: 461 VGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKY 500
V IN+ + FGG K+SG+GREG R+ M E T+ K
Sbjct: 413 VVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKT 453
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456 |
| >gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Score = 402 bits (1037), Expect = e-137
Identities = 166/436 (38%), Positives = 249/436 (57%), Gaps = 14/436 (3%)
Query: 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126
++ A+ A AF W +T+ ER +L++ L K LA ++T E GKP E+ EV
Sbjct: 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEV 60
Query: 127 VYANSFVDWFSEEARRTYGELVPSPVKS--KELLMVREPLGVVGLITPWNFPMAMITRKV 184
+++E A L P+++ + + EPLGVV I PWNFP + R
Sbjct: 61 EKCAWICRYYAENAEA---FLADEPIETDAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFA 117
Query: 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL-NVVTSSRTNANSVGKLLCTS 243
AP L AG T ++K A + P ALA+ L EA P+GV N++ S V ++
Sbjct: 118 APNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQ----VEAII-AD 172
Query: 244 PHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFR 303
P V G++ TGS + G+ + + + +K+ LELGG+ PFIV +A+L KAV A+ + +
Sbjct: 173 PRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQ 232
Query: 304 NCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363
N GQ+C+AA RF++ E V+D+F+E + + GD ++ +LGPL +++
Sbjct: 233 NAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKV-GDPM-DEDTDLGPLARKDLRDELH 290
Query: 364 SIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423
V++A++ GA ++LGG + G+ F+ PT+LT++TP M Y EE+FGPVA IK K E
Sbjct: 291 EQVEEAVAAGATLLLGGKRPDGPGA-FYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDE 349
Query: 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGL 483
EE++ +AN+S GL G FT D+ +A RV ++L+ GMV IN + S FGGVK SG
Sbjct: 350 EEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMVKSDPRLPFGGVKRSGY 409
Query: 484 GREGSRHGMEEFTQIK 499
GRE R G+ EF IK
Sbjct: 410 GRELGRFGIREFVNIK 425
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429 |
| >gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Score = 404 bits (1041), Expect = e-137
Identities = 189/478 (39%), Positives = 279/478 (58%), Gaps = 15/478 (3%)
Query: 33 YINGEWV--HSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
YI GEWV S + F NPA+ +E + P DV A+ +A+EAF +W + R
Sbjct: 2 YIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRR 61
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
L R + L+ K+ LA ++T+E GKP E G+V A + + E RR +GE VP
Sbjct: 62 AEYLFRAAELLKKRKEELARLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVP 121
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
S + +K+ + R+P+GVV LITPWNFP+A+ + K+ PAL G T V KPAEDTP AL L
Sbjct: 122 SELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKL 181
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
L EA +P GV+NVV VG+ L P V +SFTGST+VG+ + C++
Sbjct: 182 VELFAEAGLPPGVVNVVHGR---GEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN 238
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR++LE+GG P IV +A+L A+ GA+ + F GQ C A +R ++ E V+D+F++
Sbjct: 239 KRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRF 298
Query: 330 KVEITKSFIQGDTSKNDKCNL-GPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
VE K GD D+ GPLIN AQ+EKV + + +GA ++LGG ++T G
Sbjct: 299 -VERAKRLRVGD--GLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGY 355
Query: 389 K---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ F PT+ T++TPDM EE+FGPV I+ + EE++ +AN++ GL+ +T D
Sbjct: 356 EKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTED 415
Query: 446 ISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLG-REGSRHGMEEFTQIKYM 501
+++A+R + L+ G+ +N I + FGGVK+SG G RE ++ FT+ K +
Sbjct: 416 VNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAV 473
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478 |
| >gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 401 bits (1034), Expect = e-136
Identities = 185/464 (39%), Positives = 277/464 (59%), Gaps = 16/464 (3%)
Query: 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
V +P + E + VP EDV+ AI +AKE ++ ER +L+R + LE +
Sbjct: 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERR 60
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP---SP-VKSKELLMV 160
+ A + E+GKP ++ EV A + +EEA+R GE +P SP + + +
Sbjct: 61 EEFARTIALEAGKPIKDARKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTI 120
Query: 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK 220
REP+GVV ITP+NFP+ ++ KV PA+AAG V+KPA TPL+AL LA L EA +PK
Sbjct: 121 REPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPK 180
Query: 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280
G LNVVT S +VG L T P V ISFTGS VG+ + G+K+++LELG NA
Sbjct: 181 GALNVVTGS---GETVGDALVTDPRVRMISFTGSPAVGEAIAR--KAGLKKVTLELGSNA 235
Query: 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340
IV ++A+L+KAV ++ F N GQ C++ R + E ++D+F+E V TK + G
Sbjct: 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERF-VAATKKLVVG 294
Query: 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
D ++ ++GP+I+ A+ E+++ V++A+ GA+++ GG + G+ PT+LT++
Sbjct: 295 DPL-DEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGG---KRDGA-ILEPTVLTDVP 349
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
PDM EEVF PV F T +E++ +AN+S GL FTND+ +A + ++L+VG
Sbjct: 350 PDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGG 409
Query: 461 VGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
V IN+ + +GGVKESG GREG R+ +EE T+IK +CF
Sbjct: 410 VMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVCF 453
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453 |
| >gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Score = 400 bits (1031), Expect = e-136
Identities = 180/474 (37%), Positives = 268/474 (56%), Gaps = 15/474 (3%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI+GEWV NP++ + + ED AI +A AF W +T+P+ R
Sbjct: 4 YIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARAD 63
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L + ELE K+ LA ++T+E GK E+ GEV A +++ EA R GE +PS
Sbjct: 64 ILDKAGDELEARKEELARLLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPST 123
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211
E+ REPLGVVGLITPWNFP+A+ K+APALA G T V KPAE TP +A AL
Sbjct: 124 RPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVE 183
Query: 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR 271
+ EA +P GV N+V S + VG+ L P V +SFTGST VG+ + + + R
Sbjct: 184 ILEEAGLPAGVFNLVMGS---GSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARGAR 240
Query: 272 LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331
+ LE+GG P +V +A+L AV A+ F + GQ C A++R ++ E + D+FVE L V
Sbjct: 241 VQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEAL-V 299
Query: 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK-- 389
E TK+ GD + ++ ++GP+++ Q+EK ++ A S+GAK++ GG ++ K +
Sbjct: 300 ERTKALKVGD-ALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERL-KRPDEGY 357
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
+ AP + +T DM EE+FGPVA I+ + +E+L +AN++ GL+ T + A
Sbjct: 358 YLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHA 417
Query: 450 WRVGKKLQVGMVGINE---GIISHTEAAFGGVKESGLG-REGSRHGMEEFTQIK 499
++++ G+V +N G+ H FGG K S G RE +E +T IK
Sbjct: 418 THFKRRVEAGVVMVNLPTAGVDYH--VPFGGRKGSSYGPREQGEAALEFYTTIK 469
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473 |
| >gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Score = 397 bits (1022), Expect = e-135
Identities = 177/458 (38%), Positives = 263/458 (57%), Gaps = 11/458 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NPA + + ++P EDV A+ +A+ AF +W +TT ER L+ + + ++
Sbjct: 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREE 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA---RRTYGELVPSPVKSKELLMVREP 163
LAE+ +++GKP E+ +V +++++ A VP P + + + REP
Sbjct: 61 LAELEARDNGKPLDEAAWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREP 120
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
+GVVGLITPWNFP+ M KVAPALAAGCT V+KP+E T LT L LA +A EA +P GVL
Sbjct: 121 VGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVL 180
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283
NVVT + + G L P + ISFTGST G + +Q IK +SLELGG +P I
Sbjct: 181 NVVTGT---GDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPII 237
Query: 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343
V+ +A+L+KAV AM F N GQ C A +R L+ E + D F+E L +
Sbjct: 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLE 297
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFF-APTILTNITPD 402
+ LGPL++ AQ EKV S + +GA+++ GG + L +F APT+ ++ D
Sbjct: 298 EG--VRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTD 355
Query: 403 MLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMV 461
+ EE+FGPV +C++ F TE+E++ +AN+S GLA + D + RV + L+ G+V
Sbjct: 356 SRIWREEIFGPV-LCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIV 414
Query: 462 GINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
IN +A +GG K SG+GRE G++ + ++K
Sbjct: 415 WINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVK 452
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456 |
| >gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Score = 388 bits (1000), Expect = e-131
Identities = 167/453 (36%), Positives = 240/453 (52%), Gaps = 11/453 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NPA E A P + A+ +AK AF WS T +ER L +E N +
Sbjct: 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEE 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGV 166
LA ++T E GKP E+ EV A V W A + V ++ + + R+PLGV
Sbjct: 61 LARLLTLEQGKPLAEAQFEVGGA---VAWLRYTASLDLPDEVIEDDDTRRVELRRKPLGV 117
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226
V I PWNFP+ + K+APAL AG T V+KP+ TPL L L LA E +P GVLNVV
Sbjct: 118 VAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVV 176
Query: 227 TSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286
+ + +G L + P + ISFTGST GK + + ++ +KR++LELGGN IV
Sbjct: 177 SGG----DELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232
Query: 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346
+ ++ F N GQ C A R + E ++D+F E L V + K+ + GD +
Sbjct: 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEAL-VALAKAAVVGDGL-DP 290
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCY 406
LGP+ N Q +KV +V+DA +KGAKV+ GG+ F PTI+ +
Sbjct: 291 GTTLGPVQNKMQYDKVKELVEDAKAKGAKVLA-GGEPLDGPGYFIPPTIVDDPPEGSRIV 349
Query: 407 TEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG 466
EE FGPV +K+ E+E + AN+S GL +++D+ +A V ++L+ G V IN
Sbjct: 350 DEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTH 409
Query: 467 IISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+A FGG K+SG+G E G++E+TQ +
Sbjct: 410 GALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQ 442
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446 |
| >gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Score = 389 bits (1001), Expect = e-131
Identities = 188/487 (38%), Positives = 276/487 (56%), Gaps = 17/487 (3%)
Query: 19 KYLQKLCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE 76
Y Q L +IN E+V SS + NP+ E +A V G EDV A+ +A++
Sbjct: 3 SYDQPTGL------FINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARK 56
Query: 77 AFEQ-WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVD 134
AFE WS+ T +ERG +L + +E N+ LA I +SGKP + +LG++ + +
Sbjct: 57 AFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIR 116
Query: 135 WFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTC 194
+++ A + G+ +P+ K + EP GV G I PWN+P+AM K+APALAAG T
Sbjct: 117 YYAGWADKIQGKTIPTSPN-KLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAPALAAGNTV 175
Query: 195 VIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGS 254
VIKPAE+TPL+ L A L EA P GV+N++ G L P V I+FTGS
Sbjct: 176 VIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGA---VAGSALAEHPDVDKIAFTGS 232
Query: 255 TQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314
T G+++ +Q +K ++LE GG +P +V+ +A+L +AV A A N GQ C A +R
Sbjct: 233 TATGRLVMKAAAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSR 292
Query: 315 FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGA 374
+QE ++D+FVE + +++ G +D +GP ++ Q ++V S ++ +GA
Sbjct: 293 IYVQESIYDKFVEKFVEHVKQNYKVGSPF-DDDTVVGPQVSKTQYDRVLSYIEKGKKEGA 351
Query: 375 KVILGGGKVTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432
K++ GG K + K F PTI T++ DM EE+FGPV V KFKT EE++ AN+
Sbjct: 352 KLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKAND 411
Query: 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGM 492
+ GLA FT DI +A RV ++L+ GMV IN S FGG K SG+GRE +G+
Sbjct: 412 TTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGL 471
Query: 493 EEFTQIK 499
E +TQ K
Sbjct: 472 ETYTQTK 478
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484 |
| >gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Score = 386 bits (995), Expect = e-130
Identities = 171/461 (37%), Positives = 261/461 (56%), Gaps = 19/461 (4%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKERGIVLKRWLKELEGNKQ 105
V++P+ E A + G DV A+ +A+ AFE W + +P ERG +L R + + +
Sbjct: 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHAD 60
Query: 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLG 165
LA + + ++GKP T++ +V A + +++ A + +GE +P + VREP G
Sbjct: 61 ELARLESLDTGKPLTQARADVEAAARYFEYYGGAADKLHGETIP-LGPGYFVYTVREPHG 119
Query: 166 VVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225
V G I PWN+P+ + R VAPALAAG V+KPAED PLTAL LA LA EA +P G LNV
Sbjct: 120 VTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNV 179
Query: 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285
VT A G L P V ISFTGS + G + ++ + ++LELGG +P IV+
Sbjct: 180 VTGLGAEA---GAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVF 236
Query: 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345
++A+L+ A+ + A +N GQ C A +R L+ ++D+ +E L VE ++ G ++
Sbjct: 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERL-VERFRALRVGPGLED 295
Query: 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK--FFAPTILTNITPDM 403
+LGPLI+ Q+++V+ V A ++GA+++ GG + F APT+L ++ PD
Sbjct: 296 P--DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDS 353
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
EE+FGPV + F E E++ +AN ++ GL +T D +A RV ++L+ G V +
Sbjct: 354 RLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFV 413
Query: 464 NE-----GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
N GI E FGGVK+SG GRE + +TQ K
Sbjct: 414 NNYGAGGGI----ELPFGGVKKSGHGREKGLEALYNYTQTK 450
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454 |
| >gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Score = 387 bits (997), Expect = e-130
Identities = 171/474 (36%), Positives = 262/474 (55%), Gaps = 15/474 (3%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKE 88
+I G WV S+ V +PA +E + VP+ DV A+ +A+ AF+ W + +P E
Sbjct: 2 FIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAE 61
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARR-TYGE 146
R VL+R LE LA + T E+G P + S + + + +++ AR + E
Sbjct: 62 RAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEE 121
Query: 147 LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
P L+ REP+GVV I PWN P+ + K+APALAAGCT V+KP+ +TPL A
Sbjct: 122 RRPGSGGGHVLV-RREPVGVVAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDA 180
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
LA A EA +P GV+NVV + R VG+ L P V +SFTGST G+ + + C
Sbjct: 181 YLLAEAAEEAGLPPGVVNVVPADR----EVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG 236
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
+ + R++LELGG + IV +A+L AV G + A N GQ CVA R L+ +D+ V
Sbjct: 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVV 296
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
E L + GD + +GPL + Q E+V+ + ++GA+++ GGG+ L
Sbjct: 297 EAL-AAAVAALKVGDPL-DPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGL 354
Query: 387 GSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+F PT+ ++ DM EE+FGPV I + E++++ +AN+S+ GL+G +T D
Sbjct: 355 DRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTAD 414
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+ + V ++++ G VG+N G A FGG K+SG+GREG G++ + + K
Sbjct: 415 VERGLAVARRIRTGTVGVN-GFRLDFGAPFGGFKQSGIGREGGPEGLDAYLETK 467
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471 |
| >gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Score = 383 bits (985), Expect = e-129
Identities = 167/452 (36%), Positives = 270/452 (59%), Gaps = 7/452 (1%)
Query: 50 PANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNKQAL 107
PA+ +A + VEDV A+ +A++AF++ W + + ER VL + + ++ L
Sbjct: 4 PAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERL 63
Query: 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVV 167
A I T ESGKP +++ GE+ A + + AR +G+ + L++REP+GVV
Sbjct: 64 ALIETLESGKPISQARGEIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVV 123
Query: 168 GLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVT 227
G+ITPWNFP ++++K+ ALAAGCT V+KP+E T T L LA L EA +P GV+N+VT
Sbjct: 124 GIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVT 183
Query: 228 SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSN 287
+VG+ + P V +SFTGST+VGK + + ++ +K++SLELGG P IV+++
Sbjct: 184 GYGA---TVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVFAD 240
Query: 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347
A+L A + + N G+ C + +R L+ E + D FV + V ++ GD + +
Sbjct: 241 ADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAV-VARSRKVRVGD-PLDPE 298
Query: 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYT 407
+G +IN AQ+ K+ V ++GA ++LGG ++ F+ PTI T++TPDM
Sbjct: 299 TKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAR 358
Query: 408 EEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGI 467
EE+FGPV + F T +E++ +AN++ GL+ ++ DI A V ++++ G V +N +
Sbjct: 359 EEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFL 418
Query: 468 ISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
E FGG K+SG+GRE R+G+EE+T++K
Sbjct: 419 DGSPELPFGGFKQSGIGRELGRYGVEEYTELK 450
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454 |
| >gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 383 bits (986), Expect = e-129
Identities = 179/479 (37%), Positives = 254/479 (53%), Gaps = 22/479 (4%)
Query: 30 TQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
T+ INGE V +K PVYNPA E LA++ + V A+ +A AF +WSQTTPKE
Sbjct: 3 TKLLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKE 62
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFV-DWFSEEAR----RT 143
R L + +E N A + + GKP +L + + A V +F+ AR +
Sbjct: 63 RAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKA 122
Query: 144 YGELVP---SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
GE + S ++ R+P+GVV I PWN+P+ M K+APALAAG T V+KP+E
Sbjct: 123 AGEYLEGHTSMIR-------RDPVGVVASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSE 175
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
TPLTAL LA LA + +P GVLNVVT +VG L P V +S TGS GK
Sbjct: 176 ITPLTALKLAELAADI-LPPGVLNVVTGR---GATVGDALVGHPKVRMVSLTGSIATGKH 231
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ S + +KR LELGG AP IV+ +A+L V G + N GQ C AA R Q
Sbjct: 232 VLSAAADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRG 291
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
++D V L + GD D LGPLI+ A ++V V+ A + G ++ G
Sbjct: 292 IYDDLVAKL-AAAVATLKVGDPDDEDT-ELGPLISAAHRDRVAGFVERAKALGHIRVVTG 349
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
G+ ++ PT+L D EVFGPV F E++++ AN+S+ GLA
Sbjct: 350 GEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASS 409
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+T D+ +A RV +LQ G +N + +E GG K+SG G++ S +G+E++T ++
Sbjct: 410 VWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVR 468
|
Length = 475 |
| >gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Score = 378 bits (974), Expect = e-127
Identities = 186/460 (40%), Positives = 256/460 (55%), Gaps = 11/460 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V PA E LA V G EDV A+ SAK A ++WS T+ ERG +L++ L
Sbjct: 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDE 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGV 166
+A + T ++GKP E+ ++ + +++++ A GE VP P S REPLGV
Sbjct: 61 IARLETIDNGKPIEEARVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTR-REPLGV 119
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226
I WN+P+ + + K APALA G V KP+ TPLTAL LA + EA +P GV NVV
Sbjct: 120 CAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVV 179
Query: 227 TSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286
G+LLC P VA +SFTGS GK + S ++GIK ++LELGG +P I++
Sbjct: 180 QG----GGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235
Query: 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346
+A+L+ AV+GAM A F + GQ C R +Q + D+F E L VE TK GD D
Sbjct: 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERL-VERTKKIRIGDPLDED 294
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL----GSKFFAPTILTNITPD 402
+G LI+ +EKV ++ A +GAKV+ GG +V + +P +LT+ T D
Sbjct: 295 T-QMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDD 353
Query: 403 MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462
M EE+FGPV + F TEEE + AN++ GLA FT D+ +A RV +LQ G
Sbjct: 354 MTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCW 413
Query: 463 INEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
IN IS E FGG K+SG GRE +E +TQ+K +
Sbjct: 414 INTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVY 453
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457 |
| >gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Score = 376 bits (968), Expect = e-126
Identities = 165/461 (35%), Positives = 252/461 (54%), Gaps = 14/461 (3%)
Query: 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105
+PA E + D GV + + AI +A+ AF+ W+ P+ R VL E N +
Sbjct: 2 IDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAHD-PRLRARVLLELADAFEANAE 60
Query: 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-PSPVKSKELLMVREPL 164
LA ++ E+GK E+ E+ A S + +++ AR G ++ P P L++REP+
Sbjct: 61 RLARLLALENGKILGEARFEISGAISELRYYAGLARTEAGRMIEPEPGSFS--LVLREPM 118
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA-QIPKGVL 223
GV G+I PWN P+ ++ R +APALAAGCT V+KPA T A+ + E +P GV+
Sbjct: 119 GVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVV 178
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283
N+ T S + L SP V ISFTGST G+ + + + +KRL LELGG P I
Sbjct: 179 NLFTESGS---EGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCI 235
Query: 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343
V+ +A+L A+ A GQ C+A +R L+Q + D+ + L + G
Sbjct: 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLA-ARLAAVKVGPGL 294
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK--FFAPTILTNITP 401
++GPLI+ A V++VD +V+ AI+ GA+V+L GG VT+ +K F PT+L P
Sbjct: 295 DPAS-DMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDP 353
Query: 402 DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMV 461
D EE+FGPV F E E++ +AN+++ GLA +T D+++A RV + ++ G V
Sbjct: 354 DADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTV 413
Query: 462 GINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
IN+ EA GG ++SGLGR +E+F + K++
Sbjct: 414 WINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIY 454
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455 |
| >gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 376 bits (966), Expect = e-126
Identities = 182/456 (39%), Positives = 258/456 (56%), Gaps = 10/456 (2%)
Query: 49 NPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108
NPA E +A V EDV A+ +A+ AFE WS P ERG +L R + + N LA
Sbjct: 3 NPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELA 62
Query: 109 EIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKEL-LMVREPLGV 166
+ + ++GKP + +V A +++ A + GE++P V+ L VREP+GV
Sbjct: 63 RLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIP--VRGPFLNYTVREPVGV 120
Query: 167 VGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226
VG I PWNFP+ KVAPALAAG T V+KPAE TPL+AL +A L EA P GVLNVV
Sbjct: 121 VGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVV 180
Query: 227 TSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286
T G L P V I+FTGST VG+ + + +KR+SLELGG + IV++
Sbjct: 181 TGF---GEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFA 237
Query: 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346
+A+L AV A F N GQ C A +R L+ E ++D+F+E + +S GD +
Sbjct: 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERF-TSLARSLRPGDPL-DP 295
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCY 406
K +GPL++ AQ ++V V +GA+++ GG + G F PTI + P+M
Sbjct: 296 KTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGF-FVEPTIFAAVPPEMRIA 354
Query: 407 TEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG 466
EE+FGPV ++F+ EEE+L +AN + GLA +T D+ +A RV L+ G V IN
Sbjct: 355 QEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTY 414
Query: 467 IISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+ FGG K+SG GRE R ++E+T++K +
Sbjct: 415 NRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVW 450
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453 |
| >gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp | Back alignment and domain information |
|---|
Score = 373 bits (959), Expect = e-125
Identities = 155/458 (33%), Positives = 243/458 (53%), Gaps = 13/458 (2%)
Query: 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107
NPA E L +VP +V A+ A+ A W+ + R L RW + L + L
Sbjct: 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADEL 60
Query: 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRT--YGELVPSPV-KSKELLMVREPL 164
AE++ E+GKP ++ EV+ A +DW + A R ++ + +K+ + P
Sbjct: 61 AELLHAETGKPRADAGLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPY 120
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224
GVVG+I+PWN+P+ + PALAAG V+KP+E TPL LA A P+GVL
Sbjct: 121 GVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQ 180
Query: 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284
VVT G L + V ++FTGS G+ + + ++ + + LELGG P IV
Sbjct: 181 VVTGDGA----TGAALIDAG-VDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235
Query: 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
++A+L++A + A+ N GQ C++ R + E V+D+FV L V ++ G
Sbjct: 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARL-VAKARALRPGADDI 294
Query: 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDML 404
D ++GP+ Q++ V V DA++KGAK L GG + G F+ PT+LT++ DM
Sbjct: 295 GD-ADIGPMTTARQLDIVRRHVDDAVAKGAKA-LTGGARSNGGGPFYEPTVLTDVPHDMD 352
Query: 405 CYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN 464
EE FGPV + E+E++ +AN+S GL+ F+ D+++A + ++L+ G V IN
Sbjct: 353 VMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSIN 412
Query: 465 EGIISH--TEAAFGGVKESGLGREGSRHGMEEFTQIKY 500
+ +++ FGGVK+SG GR G+ EF + K
Sbjct: 413 DVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKA 450
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453 |
| >gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Score = 372 bits (957), Expect = e-124
Identities = 173/464 (37%), Positives = 247/464 (53%), Gaps = 17/464 (3%)
Query: 33 YINGEWVHS-SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I GEWV S + F NPAN E +A V EDV+ A+ +A+EAF++W + RG
Sbjct: 2 VIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGE 61
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
++++ + L K+AL +++ E GK E LGEV D+ +R YG +PS
Sbjct: 62 IVRQIGEALRKKKEALGRLVSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSE 121
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211
L+ PLGVVG+IT +NFP+A+ A AL G T V KP+E TPLTA+A+
Sbjct: 122 RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTK 181
Query: 212 LAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
+ E +P GV+N+VT G+LL P V +SFTGST+VG+ + ++
Sbjct: 182 ILAEVLEKNGLPPGVVNLVTGGGD----GGELLVHDPRVPLVSFTGSTEVGRRVGETVAR 237
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
R+ LELGGN IV +A+L AV + A GQ C R ++ E V+D+F+E
Sbjct: 238 RFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLE 297
Query: 328 MLKVEITKSFIQGDTSKNDKCNL-GPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
L V+ K GD D+ L GPLIN A VEK + ++ A S+G V+ GG ++
Sbjct: 298 RL-VKAYKQVRIGD--PLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGG 354
Query: 387 GSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ PTI+T +T D EE F P+ IKF + EE++ + N+ GL+ FT D
Sbjct: 355 EPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTED 414
Query: 446 ISQA--WRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGRE 486
+ +A W K G+V +N + AFGG KE+G GRE
Sbjct: 415 LREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRE 458
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478 |
| >gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 372 bits (956), Expect = e-124
Identities = 189/481 (39%), Positives = 282/481 (58%), Gaps = 18/481 (3%)
Query: 31 QAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-----WSQ 83
Q +I GEW PV NPA +E + D+P EDV A+ +A++AF++ W++
Sbjct: 9 QLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWAR 68
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSE--EAR 141
TT R L+ ++ K LA++ T + GKP E+ ++ +++++ EA
Sbjct: 69 TTGAVRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEAL 128
Query: 142 RTYGEL-VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
+ V P+++ + +++EPLGVVGLITPWN+P+ M T KVAPALAAGCT V+KP+E
Sbjct: 129 DAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSE 188
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+T L LA + E +P GVLNVVT T A G L + P V I+FTGST G+
Sbjct: 189 LASVTCLELADICREVGLPPGVLNVVTGLGTEA---GAPLASHPGVDKIAFTGSTATGRK 245
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ + +Q +K +SLELGG +P IV+ + +L KAV AM F GQ C A +R L+ E+
Sbjct: 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHER 305
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ +F+E L V+ K+ D + C LGP+++ Q EKV + A S+GA ++ GG
Sbjct: 306 IASEFLEKL-VKWAKNIKISDPLEEG-CRLGPVVSEGQYEKVLKFISTAKSEGATILCGG 363
Query: 381 GKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIK-FKTEEESLCVANNSNTGLA 438
+ L FF PTI+T++T M + EEVFGPV +C+K F TE+E++ +AN+S+ GLA
Sbjct: 364 KRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPV-LCVKTFSTEDEAIELANDSHYGLA 422
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498
G +ND+ + RV + Q G+V IN +A +GG+K SG GRE G+E + +
Sbjct: 423 GAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYLSV 482
Query: 499 K 499
K
Sbjct: 483 K 483
|
Length = 503 |
| >gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Score = 369 bits (948), Expect = e-123
Identities = 171/462 (37%), Positives = 261/462 (56%), Gaps = 16/462 (3%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V+NP + E + VP D + A+ +A+ E P ER +L+R L+ +
Sbjct: 3 VHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEE 62
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV----KSKELLMVRE 162
A+I+ E GKP ++ EV A + +EEA R GE +P ++ +RE
Sbjct: 63 FAKIIACEGGKPIKDARVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE 122
Query: 163 PLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGV 222
P+GVV ITP+NFP+ ++ K+APA+A GC V+KPA TPL+AL LA + EA +P+GV
Sbjct: 123 PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGV 182
Query: 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282
L VVT R +G VA +SFTGS VG+ L + + G KR++LELGGNAP
Sbjct: 183 LQVVTGER---EVLGDAFAADERVAMLSFTGSAAVGEALRA--NAGGKRIALELGGNAPV 237
Query: 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342
IV +A+L A+ F + GQ C++ R + E+++D+F+E V K GD
Sbjct: 238 IVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAF-VAAVKKLKVGD- 295
Query: 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPD 402
++ ++GPLI+ E+V+ V++A+ GA+++ GG + F PT+L ++ D
Sbjct: 296 PLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGG----ERDGALFKPTVLEDVPRD 351
Query: 403 MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462
TEE FGPV I++ EE++ +AN+++ GL FT D++ A++ +KL+VG V
Sbjct: 352 TKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVM 411
Query: 463 INEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+N+ T+ FGGVKESG+GREG + MEE T+ K +
Sbjct: 412 VNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453 |
| >gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 368 bits (948), Expect = e-123
Identities = 185/470 (39%), Positives = 272/470 (57%), Gaps = 15/470 (3%)
Query: 36 GEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVL 93
GEW S + V NP E LA++P EDV A +A A ++W+ T P+ER +L
Sbjct: 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEIL 60
Query: 94 KRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVK 153
++ + LE + + E + +ESG ++ E A + + R G ++PS V
Sbjct: 61 EKAAQILEERRDEIVEWLIRESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVP 120
Query: 154 SKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA-LALAAL 212
KE + REPLGVVG+I+PWNFP+ + R VAPALA G V+KPA DTP+T L LA +
Sbjct: 121 GKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKI 180
Query: 213 AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRL 272
EA +PKGVLNVV + +G P ISFTGST VG+ + + +K++
Sbjct: 181 FEEAGLPKGVLNVVV---GAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237
Query: 273 SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE 332
+LELGGN PF+V +A++ AV+ A+ KF + GQ C+A NR ++ E V+D+FVE VE
Sbjct: 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKF-VE 296
Query: 333 ITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392
K+ GD S D +GPLIN +QV+ + ++ A+ +GA +++GG +
Sbjct: 297 RVKALPYGDPSDPDTV-VGPLINESQVDGLLDKIEQAVEEGATLLVGG----EAEGNVLE 351
Query: 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRV 452
PT+L+++T DM EE+FGPVA IK EEE+L +AN++ GL+G FT+D+ + +
Sbjct: 352 PTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQF 411
Query: 453 GKKLQVGMVGINEGIISHTE--AAFGGVKESGLGREGSRHGMEEFTQIKY 500
+++ GM IN+ + + E FGG K SGLGR +EEFT K+
Sbjct: 412 ARRIDAGMTHINDQPV-NDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKW 460
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465 |
| >gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Score = 366 bits (941), Expect = e-123
Identities = 169/439 (38%), Positives = 245/439 (55%), Gaps = 16/439 (3%)
Query: 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE 125
D A+ +A AF WS+T P ER +L + LE + E M +E+G T +
Sbjct: 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETG--ATAAWAG 58
Query: 126 V---VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182
+ A + + + G +PS ++V+EP+GVV I PWN P+ + TR
Sbjct: 59 FNVDLAAGMLRE-AASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTR 117
Query: 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCT 242
+A LAAG T V+K +E +P T + + HEA +PKGVLNVVT S +A V + L
Sbjct: 118 AIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIA 177
Query: 243 SPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF 302
P V ++FTGST+VG+I+ ++ +K + LELGG AP IV +A+L A + A+ F
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAF 237
Query: 303 RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362
N GQ C++ R ++ E + D+FVE LK K F LG L++ A ++V
Sbjct: 238 LNSGQICMSTERIIVHESIADEFVEKLKAAAEKLF-------AGPVVLGSLVSAAAADRV 290
Query: 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422
+V DA+SKGAK+++GG PTIL N+TPDM Y+EE FGPV I+ K
Sbjct: 291 KELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKD 350
Query: 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKE 480
EEE++ +AN+S GL+ FT D+++A V K+++ G V IN G+ H E GGVK
Sbjct: 351 EEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHIN-GMTVHDEPTLPHGGVKS 409
Query: 481 SGLGREGSRHGMEEFTQIK 499
SG GR + G++EFT+ K
Sbjct: 410 SGYGRFNGKWGIDEFTETK 428
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432 |
| >gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-123
Identities = 173/457 (37%), Positives = 249/457 (54%), Gaps = 13/457 (2%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V +PA E +A VPD DV A+ +A AF W +TTP ER L + +E N +
Sbjct: 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEE 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVD---WFSEEARRTYGELVPSPVKSKELLMVREP 163
LA + ++ +GKP + + VD +F+ AR G + ++ REP
Sbjct: 61 LAALESRNTGKPLHLVRDDELPGA--VDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREP 118
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
+GVV I PWN+P+ M K+APALAAG T V+KP+E TPLT L LA LA E +P GV+
Sbjct: 119 IGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAEV-LPPGVV 177
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283
NVV S G L P V +S TGS + GK + + +KR+ LELGG AP I
Sbjct: 178 NVVCGGG---ASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVI 234
Query: 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343
V+ +A+L AV+G A + N GQ C AA R + E V+D+FV L VE + GD
Sbjct: 235 VFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAAL-VEAVSAIRVGD-P 292
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM 403
++ +GPL + AQ E+V V+ A A+V+ GG + G F+ PT++ + D
Sbjct: 293 DDEDTEMGPLNSAAQRERVAGFVERA-PAHARVLTGGRRAEGPGY-FYEPTVVAGVAQDD 350
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
EE+FGPV F E+E++ +AN+ GLA +T D+ +A R+ +L G V +
Sbjct: 351 EIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWV 410
Query: 464 NEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500
N I E GG K+SG G++ S + +E++T+IK+
Sbjct: 411 NTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKH 447
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450 |
| >gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Score = 366 bits (942), Expect = e-122
Identities = 183/479 (38%), Positives = 269/479 (56%), Gaps = 16/479 (3%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ---WSQ 83
YT+ +IN EW S K FP NPA E + +V + DV A+ +A+ AF+ W
Sbjct: 6 YTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRT 65
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARR 142
ERG +L + +E ++ LA + T ++GKP L ++ A + +++ A +
Sbjct: 66 MDASERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADK 125
Query: 143 TYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201
+G+ +P + R EP+GV G I PWNFP+ M K+APALA G T V+KPAE
Sbjct: 126 IHGKTIP--MDGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQ 183
Query: 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-I 260
TPLTAL LA+L EA P GV+NVV A G + + P + ++FTGST+VGK I
Sbjct: 184 TPLTALYLASLIKEAGFPPGVVNVVPGYGPTA---GAAISSHPDIDKVAFTGSTEVGKLI 240
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ +KR++LELGG +P IV+++A+L AV A A F N GQ C A +R +QE
Sbjct: 241 QQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQES 300
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
++D+FV+ VE K + G+ + K GP I+ Q +K+ +++ +GAK+ GG
Sbjct: 301 IYDEFVKRS-VERAKKRVVGNPF-DPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGG 358
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
+ G F PT+ +++T DM EE+FGPV KFKT +E + ANN+ GLA
Sbjct: 359 KRHGDKGY-FIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAA 417
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT DI +A L+ G V +N + +A FGG K SG GRE +G++E+T++K
Sbjct: 418 VFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVK 476
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481 |
| >gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Score = 364 bits (936), Expect = e-121
Identities = 176/479 (36%), Positives = 266/479 (55%), Gaps = 20/479 (4%)
Query: 33 YINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+INGEWV SK F YNP N + L ++P EDV A+ +A EAF+ W +T+ ER
Sbjct: 4 FINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERA 63
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L + +E N + LA T ++GKP E+L ++ A +F+ R G L
Sbjct: 64 NILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSL-- 121
Query: 150 SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
S + L EPLGVVG I PWNFP+ M K+APALAAG T V+KPA TPL+ L
Sbjct: 122 SEIDEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILV 181
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
L L + +PKGV+NVVT + A GK L + P +A ++FTGST VG+++ + ++
Sbjct: 182 LMELIGDL-LPKGVVNVVTGFGSEA---GKPLASHPRIAKLAFTGSTTVGRLIMQYAAEN 237
Query: 269 IKRLSLELGGNAPFIVYSNA-----NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
+ ++LELGG +P I + +A + N G+ C +R L+QE ++D
Sbjct: 238 LIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYD 297
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+F+E VE ++ G+ + + +G ++ Q+EK+ S V +GA+V+ GG ++
Sbjct: 298 EFIERA-VERFEAIKVGN-PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERL 355
Query: 384 TK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
T F+ PT++ DM + EE+FGPV I FK EEE++ +AN++ GL G
Sbjct: 356 TLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGG 415
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+T DI++A RV + +Q G V +N A FGG K+SG+GRE + ++ + Q K
Sbjct: 416 VWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480 |
| >gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 360 bits (926), Expect = e-120
Identities = 177/474 (37%), Positives = 269/474 (56%), Gaps = 14/474 (2%)
Query: 33 YINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I+GE+V S + NPAN E +A V EDV+ AI +A+ A +W+ +P ERG
Sbjct: 1 FIDGEYVEDSAGTTREIINPANGEVIATVHAATPEDVERAIAAARRAQGEWAAMSPMERG 60
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESL--GEVVYANSFVDWFSEEARRTYGELV 148
+L+R + + LA++ T ++GK E++ A+ F ++F+ A GE++
Sbjct: 61 RILRRAADLIRERNEELAKLETLDTGKTLQETIVADMDSGADVF-EFFAGLAPALNGEII 119
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
P S +REPLGV I WN+P+ + + K+APALAAG V KP+E+TPLTAL
Sbjct: 120 PLGGPS-FAYTIREPLGVCVGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALK 178
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+A + EA +PKGV NVV + VG LL P VA +SFTG GK + + +
Sbjct: 179 VAEIMEEAGLPKGVFNVVQG---DGAEVGPLLVNHPDVAKVSFTGGVPTGKKIMAAAAGH 235
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
+K +++ELGG +P IV+ +A+L+ AV GAM F + GQ C R + +++ ++F+
Sbjct: 236 LKHVTMELGGKSPLIVFDDADLESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLAR 295
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L VE T+ GD +GPLI+ A +KV S ++ ++GA + GGG+ +G
Sbjct: 296 L-VERTERIKLGDPFDEAT-EMGPLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGL 353
Query: 389 K---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ F PT+ + T DM EE+FGPV + F E+E + AN++ GLAG FT D
Sbjct: 354 QNGFFVEPTVFADCTDDMTIVREEIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTAD 413
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+ +A RV +L+ G V IN + EA FGG K+SG+GRE + + +T++K
Sbjct: 414 LGRAHRVADQLEAGTVWINTYNLYPAEAPFGGYKQSGIGRENGKAALAHYTEVK 467
|
Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467 |
| >gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 359 bits (923), Expect = e-119
Identities = 180/475 (37%), Positives = 276/475 (58%), Gaps = 17/475 (3%)
Query: 33 YINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+INGEWV S + YNPAN E L+++ D DV A+ +A+EAF+ W +TT ER
Sbjct: 4 FINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERA 63
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L + ++ NK+ LA + T ++GKP E+ ++ A +F+ R G
Sbjct: 64 NILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSAN- 122
Query: 150 SPVKSKELL--MVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+ ++ L ++REP+GVVG I PWNFP M K+APALAAG T VIKP+ T L+ L
Sbjct: 123 --MIDEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLL 180
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
LA + + +PKGV+N+VT + + G+ L P + ++FTGST+VG+ + ++
Sbjct: 181 ELAKIIQDV-LPKGVVNIVTGKGSKS---GEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+ +LELGG + I++ +AN KA+ GA N GQ C A +R +QE ++D+FV
Sbjct: 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVA 296
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
LK + ++ + +G +N Q++K+ S V A +GAK++ GG ++T+ G
Sbjct: 297 KLKEKFEN--VKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENG 354
Query: 388 ---SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
F PT++ N+T DM EE+FGPVA IKFKTE+E + +AN+S GL G FT
Sbjct: 355 LDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTK 414
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
DI++A RV + ++ G V +N A FGG K+SG+GRE + ++ +TQ+K
Sbjct: 415 DINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMK 469
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475 |
| >gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Score = 355 bits (914), Expect = e-118
Identities = 175/465 (37%), Positives = 255/465 (54%), Gaps = 19/465 (4%)
Query: 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
V NP E +A V G +D++ AI +A +AF R +L + LE
Sbjct: 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERF 60
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP---SPVKSKELLMVR 161
+ LAE + E+GKP ++ GEV A +EEA R YGE++P S +VR
Sbjct: 61 EELAETIVLEAGKPIKDARGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVR 120
Query: 162 E-PLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK 220
P+G V ITP+NFP+ ++ KVAPA+AAGC V+KPA TPL+AL L + E +PK
Sbjct: 121 RFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPK 180
Query: 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280
G +V+ SR +A+ LL T + +SFTGS VG L + G K++ LELGGNA
Sbjct: 181 GAFSVLPCSRDDAD----LLVTDERIKLLSFTGSPAVGWDLKARA--GKKKVVLELGGNA 234
Query: 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340
IV S+A+L A + F GQ+C++ R L+ V+D+F L V K+ G
Sbjct: 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRL-VARVKALKTG 293
Query: 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
D K+D ++GP+I+ ++ E+V+ V +A+ GAK++ GG K PTIL ++
Sbjct: 294 D-PKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGG----KRDGALLEPTILEDVP 348
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
PDM EEVFGPV + +E+L N+S GL FT D+ +A R +L+VG
Sbjct: 349 PDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGG 408
Query: 461 VGINEGIISH--TEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
V IN+ + + +GGVK+SG+GREG R+ +EE T+ + +
Sbjct: 409 VVIND-VPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452 |
| >gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Score = 354 bits (909), Expect = e-117
Identities = 183/481 (38%), Positives = 272/481 (56%), Gaps = 21/481 (4%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQT 84
+T+ +ING++V S K FP +P N E +A V + EDV A+ +A++AF++ W +
Sbjct: 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRM 62
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRT 143
T ER +L R+ LE + LA + T ++GKP ++ EV A +++ A +
Sbjct: 63 TGYERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKI 122
Query: 144 YGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201
+G +P+ P L EP+GVVG I PWNFP+ M KV PALA G T V+KPAE
Sbjct: 123 HGMTLPADGPHHVYTL---HEPIGVVGQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQ 179
Query: 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
TPL+AL A LA EA +P GVLN+VT + G + + V ++FTGST+VGKI+
Sbjct: 180 TPLSALLAAKLAAEAGLPDGVLNIVTGF---GPTAGAAIASHMDVDKVAFTGSTEVGKII 236
Query: 262 YSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
++ +K ++LELGG +PFIV +A++ KAV A A F N GQ C A +R + E
Sbjct: 237 MQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHES 296
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
++D+FVE K K + GD + GP ++ Q EK+ S ++ +GA +I GG
Sbjct: 297 IYDEFVEKAKARALKRVV-GDPFRK-GVEQGPQVDKEQFEKILSYIEHGKEEGATLITGG 354
Query: 381 GKVTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA 438
++ GSK + PTI +++ DM +E+FGPV +KFKT +E + ANNS GLA
Sbjct: 355 DRI---GSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLA 411
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498
F+ +I A + + L+ G V +N + FGG K SG+GRE + + + Q+
Sbjct: 412 AGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQV 471
Query: 499 K 499
K
Sbjct: 472 K 472
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476 |
| >gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Score = 348 bits (895), Expect = e-115
Identities = 173/479 (36%), Positives = 248/479 (51%), Gaps = 23/479 (4%)
Query: 31 QAYINGEWVHSSKKF-PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP-KE 88
+ INGEW SS K VY+P + E + VP + ++ A +A +A W T P +E
Sbjct: 3 KYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEE 62
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R L ++ L+ NK+ +A ++ E GK ++L EV ++ EE +R G+ +
Sbjct: 63 RIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSL 122
Query: 149 PSP----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
P K K + REPLGVV I P+N+P+ + K+ PAL G T V KPA L
Sbjct: 123 PGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVL 182
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
+ LA H+A PKGV+NVVT +G L T + ISFTGST+VG L
Sbjct: 183 LGIPLAEAFHDAGFPKGVVNVVT---GRGREIGDPLVTHGRIDVISFTGSTEVGNRLKK- 238
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
+KRL LELGG P IV +A+L+ A + GQ C A R L+ E V D+
Sbjct: 239 -QHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADE 297
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
VE+LK E+ K + G ++ ++ PLI+ + V+ ++ DA++KGA V+ GGG+
Sbjct: 298 LVELLKEEVAKLKV-GM-PWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREG 355
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
PT+L +TPDM EE FGPV I+ EE++ +AN SN GL FT
Sbjct: 356 G---NLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTK 412
Query: 445 DISQAWRVGKKLQVGMVGINE----GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
DI++A ++ L+VG V IN G F G K+SG+G +G + T+ K
Sbjct: 413 DINKARKLADALEVGTVNINSKCQRGPDHF---PFLGRKDSGIGTQGIGDALRSMTRRK 468
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473 |
| >gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Score = 345 bits (887), Expect = e-114
Identities = 172/466 (36%), Positives = 258/466 (55%), Gaps = 21/466 (4%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+ING+WV + K FP NPA E LA V EDV A+ +A+ AFE WS R
Sbjct: 25 FINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRA 84
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVP 149
L R + ++ +++ A + + ++GKP ES ++ + A+
Sbjct: 85 RHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQ-------- 136
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
L +P+GVVG I PWNFP+ M+ K+ PALA G T V+KPAE TPLTAL
Sbjct: 137 ---LLDTELAGWKPVGVVGQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLF 193
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A + EA +P GVLN+VT S G L P V ++FTGST+VG+ L +
Sbjct: 194 AEICAEAGLPPGVLNIVTG----NGSFGSALANHPGVDKVAFTGSTEVGRALRRATAGTG 249
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
K+LSLELGG +PFIV+ +A+L AV G + A + N GQ C A +R L+QE V ++ + L
Sbjct: 250 KKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKL 309
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
K ++ + K ++G +++ AQ++++ +V++ ++GA V G + G
Sbjct: 310 KERMSHLRVGDPLDKA--IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGP- 366
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
F+ PT+ TN+ P EE+FGPV V + F+T +E++ +ANN+ GLA ++ ++S A
Sbjct: 367 FYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLA 426
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
V L+ G+V IN + A FGG +ESG GREG + G+ E+
Sbjct: 427 LEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEY 472
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480 |
| >gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 345 bits (887), Expect = e-114
Identities = 175/482 (36%), Positives = 253/482 (52%), Gaps = 27/482 (5%)
Query: 31 QAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
YI+G +V S + F V NPA E LA V DV+ A+ SAK+ + W+ T E
Sbjct: 8 SLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAME 67
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFS-EEARRTYGEL 147
R +L+R + L LA + T ++GKP E+ S VD + + Y L
Sbjct: 68 RSRILRRAVDILRERNDELAALETLDTGKPIQET--------SVVDIVTGADVLEYYAGL 119
Query: 148 VPS------PVKSKELL-MVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
P+ P++ + REPLGV I WN+P+ + K APALAAG + KP+E
Sbjct: 120 APALEGEQIPLRGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAPALAAGNAMIFKPSE 179
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
TPLTAL LA + EA +P GV NVV VG L P +A +SFTG GK
Sbjct: 180 VTPLTALKLAEIYTEAGLPDGVFNVVQGDG----RVGAWLTEHPDIAKVSFTGGVPTGKK 235
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ + + +K +++ELGG +P IV+ +A+L +A AM A F + GQ C R +Q+
Sbjct: 236 VMAAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKS 295
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ F L E + GD + N GPL++ A +KV ++ ++GA+++ GG
Sbjct: 296 IKAAFEARLL-ERVERIRIGDPM-DPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGG 353
Query: 381 GKVTKLGSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL 437
++T+ G F APT+ T+ T DM EE+FGPV + F E+E + AN++ GL
Sbjct: 354 ERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGL 413
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497
A FT D+S+A RV +L+ G+ IN S E GG K+SG+GRE +E +TQ
Sbjct: 414 AAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQ 473
Query: 498 IK 499
IK
Sbjct: 474 IK 475
|
Length = 488 |
| >gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Score = 342 bits (879), Expect = e-113
Identities = 167/459 (36%), Positives = 260/459 (56%), Gaps = 20/459 (4%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NP E + VP E ++ A+ A S T +R +L + LE ++
Sbjct: 3 VRNPYTGEVVGTVPAGTEEALREALALA---ASYRSTLTRYQRSAILNKAAALLEARREE 59
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV----KSKELLMVRE 162
A ++T ESG ++ EV A + + + EA R GE + K++++ +RE
Sbjct: 60 FARLITLESGLCLKDTRYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLRE 119
Query: 163 PLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGV 222
PLGVV ITP+N P+ + K+APA+AA V+KP+E TPL+A+ LA L +EA +P +
Sbjct: 120 PLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDM 179
Query: 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282
L+VVT +G L T P V ++FTG VGK + + G KR LELGGN P
Sbjct: 180 LSVVTG---EPGEIGDELITHPDVDLVTFTGGVAVGKAI--AATAGYKRQLLELGGNDPL 234
Query: 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342
IV +A+L++A + A+A + N GQ C A R L+ E V D+FV++L VE + + + GD
Sbjct: 235 IVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLL-VEKSAALVVGDP 293
Query: 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPD 402
++G +I+ ++++ V++AI++GA+V+LG + +APT+L ++ PD
Sbjct: 294 MDPAT-DMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQ----GALYAPTVLDHVPPD 348
Query: 403 MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462
TEE FGPVA I+ K +E++ ++N++ GL+ TND+ R+ ++L VG V
Sbjct: 349 AELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVN 408
Query: 463 INEGIISHTE-AAFGGVKESGLG-REGSRHGMEEFTQIK 499
+NE +E + FGGVK+SGLG +EG R M+E T +K
Sbjct: 409 VNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVK 447
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451 |
| >gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 338 bits (868), Expect = e-112
Identities = 160/436 (36%), Positives = 239/436 (54%), Gaps = 14/436 (3%)
Query: 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124
DV A A A W+ T P+ER VL+R LE + +A+ + +ESG ++
Sbjct: 13 ADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF 72
Query: 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184
EV A + + + GE++PS + L R PLGVVG+I+P+NFP+ + R V
Sbjct: 73 EVGAAIGELHEAAGLPTQPQGEILPSA-PGRLSLARRVPLGVVGVISPFNFPLILAMRSV 131
Query: 185 APALAAGCTCVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTS 243
APALA G V+KP TP++ + +A L EA +P GVL+V+ G+ L
Sbjct: 132 APALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPG----GADAGEALVED 187
Query: 244 PHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFR 303
P+VA ISFTGST VG+ + + +K++SLELGG IV +A+L A S F
Sbjct: 188 PNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFL 247
Query: 304 NCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363
+ GQ C+AA R L+ E V D + L K GD + + LGPLIN Q+++V
Sbjct: 248 HQGQICMAAGRHLVHESVADAYTAKL-AAKAKHLPVGDPAT-GQVALGPLINARQLDRVH 305
Query: 364 SIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423
+IV D+++ GA++ GG T G F+ PT+L+ + P M + EE+FGPVA F ++
Sbjct: 306 AIVDDSVAAGARLEAGG---TYDG-LFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSD 361
Query: 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH-TEAAFGGVKESG 482
EE++ +AN++ GL+ + D+ +A + +L+ GM+ IN+ ++ FGG+ SG
Sbjct: 362 EEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASG 421
Query: 483 LG-REGSRHGMEEFTQ 497
G R G EEFTQ
Sbjct: 422 NGSRFGGPANWEEFTQ 437
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443 |
| >gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Score = 339 bits (870), Expect = e-111
Identities = 179/474 (37%), Positives = 264/474 (55%), Gaps = 15/474 (3%)
Query: 33 YINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWS-QTTPKE 88
+INGE+V S VYNP+ + + + + DV A+ A AFE W + + +
Sbjct: 10 FINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSK 69
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARRTYGEL 147
RG L + +E N LA I ++GK T +V + ++ A + +G++
Sbjct: 70 RGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQV 129
Query: 148 VPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
+ + K+L R EP+GV G I PWNFP+ M K+APALAAG T V+KP+E TPL+A
Sbjct: 130 IET--DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSA 187
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG-KILYSHC 265
L + L EA P GV+NVV+ + G + + + ++FTGST VG K++ +
Sbjct: 188 LYMTKLIPEAGFPPGVINVVSG---YGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAA 244
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
+K+++LELGG +P IV+ +A+L+ AV F N GQ C A +R +QE ++D+F
Sbjct: 245 KSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKF 304
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
V+ K E K GD D GP ++ Q E++ S ++ ++GA V GG +
Sbjct: 305 VKRFK-EKAKKLKVGDPFAEDTFQ-GPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN 362
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
G F PTI T++T DM EE+FGPV IKFKTEEE++ AN+S GLA FTN+
Sbjct: 363 EGY-FIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNN 421
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
I+ A RV L+ G V +N + H + FGG K+SG+GRE + +E +TQIK
Sbjct: 422 INNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIK 475
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481 |
| >gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Score = 337 bits (865), Expect = e-111
Identities = 177/460 (38%), Positives = 252/460 (54%), Gaps = 14/460 (3%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NPA + + +VP DV A+ +AK AF +W+ T +ERG +L R LE +
Sbjct: 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEE 60
Query: 107 LAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLG 165
LA ++ E+G T++ E +F A GE +P VREPLG
Sbjct: 61 LARLLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLP-FGPDVLTYTVREPLG 119
Query: 166 VVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225
VVG I PWN P+ + K+APAL AG T V+K AED PL L LA + + +P GVLNV
Sbjct: 120 VVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNV 178
Query: 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285
+T G L P V ++FTGST+VGKI+Y + + +SLELGG +P IV+
Sbjct: 179 ITGY---GEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF 235
Query: 286 SNANLQKAVSGAMAA-KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
+A+L AV GA+A +F GQ+C A +R + E ++D F+E L +++K I GD
Sbjct: 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKI-GD-PL 293
Query: 345 NDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGG--KVTKLGSKFF-APTILTNIT 400
++ ++G +I+ Q KV + +S GA V+ GG L FF PTI + +
Sbjct: 294 DEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVD 353
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
+ EE+FGPV I +K E+E + +AN+S+ GLA Y +T D+ +A R L+ G
Sbjct: 354 NEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGW 413
Query: 461 VGINEGIISHTEAAFGGVKESGLGREGSRHGM-EEFTQIK 499
V +N+G ++GG K+SGLGRE S GM E FTQ K
Sbjct: 414 VQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKK 453
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457 |
| >gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 335 bits (861), Expect = e-110
Identities = 173/479 (36%), Positives = 259/479 (54%), Gaps = 16/479 (3%)
Query: 33 YINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I+GE+V S F +PA +E L V G DV A +AKEAF++W++ ER
Sbjct: 4 FIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERK 63
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA-RRTYGELVP 149
L + +E + +A + + G+P ++ +V+ A +F+++ G P
Sbjct: 64 RYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYP 123
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
VR P+G VGLITPWN P + T K+APALA G T V+KPAE +PLTA L
Sbjct: 124 VDTHLN--YTVRVPVGPVGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARL 181
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A +A EA +P GV N+V A GK L P V +SFTG T G I+ + + +
Sbjct: 182 AEIAKEAGLPDGVFNLVHGFGEEA---GKALVAHPDVKAVSFTGETATGSIIMRNGADTL 238
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR S+ELGG +P IV+ +A+L++A+ + F G+ C A++R L+QE + + FVE L
Sbjct: 239 KRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKL 298
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
E ++ G + +GPLI+ + KV V+ A +GA +++GG + +
Sbjct: 299 V-ERVRAIRVGHPLDPET-EVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGE 356
Query: 390 ------FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
+ PT+ T M EE+FGPV I FK EEE++ AN++ GLAGY +T
Sbjct: 357 DLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWT 416
Query: 444 NDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
ND+ +A RV L+ GM+ +N + H FGGVK SG+GREG + + +T+ K +
Sbjct: 417 NDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNVA 475
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488 |
| >gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 329 bits (846), Expect = e-108
Identities = 175/493 (35%), Positives = 279/493 (56%), Gaps = 20/493 (4%)
Query: 17 HMKYLQK--LCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIM 72
H+ Y Q L L+ + +INGE+ ++ + F +P LA + D+ A+
Sbjct: 5 HLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVS 64
Query: 73 SAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYA 129
+A+ FE+ WS ++P +R VL + +E + + LA + T ++GKP SL ++ A
Sbjct: 65 AARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGA 124
Query: 130 NSFVDWFSEEARRTYGELVPSPVKSKELLM-VREPLGVVGLITPWNFPMAMITRKVAPAL 188
+ W++E + YGE+ + S EL M VREP+GV+ I PWNFP+ + K+ PAL
Sbjct: 125 ARAIRWYAEAIDKVYGEVATT--SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKLGPAL 182
Query: 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAG 248
AAG + ++KP+E +PL+A+ LA LA EA +P GVLNVVT A G+ L +
Sbjct: 183 AAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEA---GQALSRHNDIDA 239
Query: 249 ISFTGSTQVGKILYSHCSQG-IKRLSLELGGNAPFIVYSNA-NLQKAVSGAMAAKFRNCG 306
I+FTGST+ GK L +KR+ LE GG + IV+++ +LQ+A S A F N G
Sbjct: 240 IAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQG 299
Query: 307 QACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366
Q C+A R L++E + D+F+ +LK + +++ G + +G LI+ A + V S +
Sbjct: 300 QVCIAGTRLLLEESIADEFLALLKQQA-QNWQPGH-PLDPATTMGTLIDCAHADSVHSFI 357
Query: 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426
++ SKG +++L G + PTI ++ P+ EE+FGPV V +F +EE++
Sbjct: 358 REGESKG-QLLLDGRNAGLAAA--IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQA 414
Query: 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGRE 486
L +AN+S GL +T D+S+A R+ ++L+ G V +N FGG K+SG GR+
Sbjct: 415 LQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRD 474
Query: 487 GSRHGMEEFTQIK 499
S H +E+FT++K
Sbjct: 475 KSLHALEKFTELK 487
|
Length = 494 |
| >gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 325 bits (834), Expect = e-106
Identities = 170/486 (34%), Positives = 256/486 (52%), Gaps = 23/486 (4%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWSQTTPKER 89
+ +ING +V S K F NP + +A V + G +V A+ +A+ A + W + T ER
Sbjct: 2 RNFINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAER 61
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV-----YANSFVDWFSEEARRTY 144
+L E+E ++GKP SL + AN V F++ +
Sbjct: 62 ADLLYAVADEIERRFDDFLAAEVADTGKP--RSLASHLDIPRGAANFRV--FADVVKNAP 117
Query: 145 GEL--VPSPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201
E + +P L VR+PLGVVG+I+PWN P+ ++T KV PALA G T V+KP+E+
Sbjct: 118 TECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEE 177
Query: 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261
TP TA L + + +PKGV NVV +S G+ L P V I+FTG T+ G +
Sbjct: 178 TPGTATLLGEVMNAVGVPKGVYNVVHG--FGPDSAGEFLTRHPGVDAITFTGETRTGSAI 235
Query: 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
+ G+K +S ELGG IV+++ + AV+G + + F N GQ C+ R ++ +
Sbjct: 236 MKAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPI 295
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
FD+FV LK +S G + N+GPLI+ +KV S A+ +GA V+ GGG
Sbjct: 296 FDRFVAALK-ARAESLKIGVPD-DPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGG 353
Query: 382 KVTKLGSK-----FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
V G + PTI T + TEE+FGP F +EEE + +AN++ G
Sbjct: 354 -VPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYG 412
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
LA +T D+S+A RV ++++VG+V +N + FGG K SG+GREG H +E +T
Sbjct: 413 LAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYT 472
Query: 497 QIKYMC 502
++ +C
Sbjct: 473 ELTNVC 478
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481 |
| >gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = e-106
Identities = 173/479 (36%), Positives = 255/479 (53%), Gaps = 16/479 (3%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWSQTTPKER 89
+I+G V S K+ + NPA ++ +A V DV A+ SA AF W++TTP ER
Sbjct: 3 FIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAER 62
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGE-L 147
G +L R +E + + LA++ T SGK S EV + +F+ +F+ A + GE L
Sbjct: 63 GRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETL 122
Query: 148 VPS-PVKSKE---LLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
PS P E REP+GVV I PWNF + + K+ ALA GCT VIKP+E TP
Sbjct: 123 APSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTP 182
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
LT L +A LA EA IP GVLNVV +VG L + P VA +SFTGS GK +
Sbjct: 183 LTLLRVAELAKEAGIPDGVLNVVNGK----GAVGAQLISHPDVAKVSFTGSVATGKKIGR 238
Query: 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
+ + R++LELGG +A++ V G + A F + GQ C A RF + FD
Sbjct: 239 QAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD 298
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+ V LK + SF G ++ GPL N +KV S + DA ++G +++ GG +
Sbjct: 299 ELVTKLKQAL-SSFQVGS-PMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEAL 356
Query: 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
G F PT++ + D EE FGPV + ++ EEE + + N++ GL +T
Sbjct: 357 AGEGY-FVQPTLVLARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWT 415
Query: 444 NDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
N++S+A R +++ G V +N FGG+K+SG+GRE ++++T++K +
Sbjct: 416 NNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVM 474
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477 |
| >gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 324 bits (832), Expect = e-105
Identities = 178/481 (37%), Positives = 279/481 (58%), Gaps = 21/481 (4%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQT 84
+T+ +INGE+V S K F +P E +A + + EDV A+ +A+EAF+ W +
Sbjct: 20 FTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRM 79
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV---YANSFVDWFSEEAR 141
+ ERG ++ ++ +E + + LA + T ++GK LG+ V A + +++ A
Sbjct: 80 SGFERGRIMMKFADLIEEHIEELAALDTIDAGKLFA--LGKAVDIPAAAGLLRYYAGAAD 137
Query: 142 RTYGELVPSPVKSKEL--LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPA 199
+ +GE + S++L ++EP+GVVG I PWNFP M KVAPALAAGCT V+KPA
Sbjct: 138 KIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKVAPALAAGCTMVVKPA 194
Query: 200 EDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG- 258
E TPL+AL A LA A +P GV+NVVT A G + + V +SFTGST+VG
Sbjct: 195 EQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTA---GAAIASHMDVDKVSFTGSTEVGR 251
Query: 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
KI+ + + +K++SLELGG +P +++ +A++ AV A+ F N G+ CVA++R +Q
Sbjct: 252 KIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQ 311
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
E ++D+FV+ L VE K ++ GD + + GP ++ Q EK+ S ++ +GA ++
Sbjct: 312 EGIYDEFVKKL-VEKAKDWVVGDPF-DPRARQGPQVDKQQFEKILSYIEHGKREGATLLT 369
Query: 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA 438
GG G + PTI T++T DM +E+FGPV +KFKT EE++ ANN+ GLA
Sbjct: 370 GGKPCGDKGY-YIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLA 428
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498
T D+ A V + ++ G + +N + FGG K SG GR+ ++++ Q+
Sbjct: 429 AGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQV 488
Query: 499 K 499
K
Sbjct: 489 K 489
|
Length = 501 |
| >gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 324 bits (833), Expect = e-105
Identities = 164/468 (35%), Positives = 239/468 (51%), Gaps = 33/468 (7%)
Query: 40 HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKE 99
+ V P E LA VP DV+ A A+ A W+ T +ER VL R+
Sbjct: 29 AAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDL 88
Query: 100 LEGNKQALAEIMTQESGKPPTESLGEVV--------YANSFVDWFSEEARRTYGELVPSP 151
+ N++ L +++ E+GK + EV+ YA + R +P
Sbjct: 89 VLENREELLDLVQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAG---ALPVL 145
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211
K+ EL R+P GVVG+I+PWN+P+ + PAL AG V+KP TPLTALA
Sbjct: 146 TKTTEL---RQPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVE 202
Query: 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR 271
L +EA +P+ + VVT VG L + + FTGST G++L +R
Sbjct: 203 LLYEAGLPRDLWQVVTGPGP---VVGTAL--VDNADYLMFTGSTATGRVLAEQAG---RR 254
Query: 272 L---SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
L SLELGG P IV +A+L KA +GA+ A F N GQ C++ R + E ++D+FV
Sbjct: 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRA 314
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
V ++ G + ++G LI+ AQ+E V + V DA++KGA V+ GG LG
Sbjct: 315 F-VAAVRAMRLG-AGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGP 372
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F+ PT+LT +TPDM EE FGPV +E++ AN++ GL +T D ++
Sbjct: 373 LFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTAR 432
Query: 449 AWRVGKKLQVGMVGINEGIIS---HTEAAFGGVKESGLGREGSRHGME 493
+ +++ G V +NEG + +A GG+K+SGLGR RHG E
Sbjct: 433 GRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR---RHGAE 477
|
Length = 524 |
| >gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Score = 321 bits (824), Expect = e-104
Identities = 168/481 (34%), Positives = 266/481 (55%), Gaps = 17/481 (3%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTT 85
Q +INGE+V K + NP + + V VEDV A+ +AKEAFE +W +
Sbjct: 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMN 65
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTY 144
++RG ++ R +E +++ LA I + +SG T +L V + +F+ +
Sbjct: 66 ARDRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQ 125
Query: 145 GELVP-SPVKSKELLMV--REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201
G+ +P + + L + REP+GV G++ PWN+P+ M+ K+A LAAG T V+KPA+
Sbjct: 126 GKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQV 185
Query: 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK-I 260
TPLTAL A L +A PKGV+N++ S + VG+ L P V + FTGST +GK I
Sbjct: 186 TPLTALKFAELTVKAGFPKGVINILPGSGSL---VGQRLSDHPDVRKLGFTGSTPIGKHI 242
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ S +K++SLELGG +P I++++ ++ KAV M++ F N G+ C+AA R ++E
Sbjct: 243 MKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEES 302
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ D+FV + E+ K I GD + GP + A ++K+ + + +GA ++ GG
Sbjct: 303 IHDEFVRRVVEEVKKMKI-GDPLDRST-DHGPQNHKAHLDKLVEYCERGVKEGATLVYGG 360
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSNTGLA 438
+V + G FF PT+ T++ M EE FGP+ + KF + L AN++ GLA
Sbjct: 361 KQVDRPGF-FFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLA 419
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498
FT DI++A V KL+ G V +N + A FGG K+SG G++ + E+ +
Sbjct: 420 SGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKT 479
Query: 499 K 499
K
Sbjct: 480 K 480
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486 |
| >gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Score = 322 bits (826), Expect = e-104
Identities = 182/479 (37%), Positives = 264/479 (55%), Gaps = 17/479 (3%)
Query: 29 YTQAYINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQT 84
YTQ ING++V S K FP +P E +A V + EDV A+ +A++AF++ W +
Sbjct: 57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKM 116
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRT 143
T ER +L R+ LE + LA + T ++GKP +S E+ +++ A +
Sbjct: 117 TAYERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKI 176
Query: 144 YGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
+G VP+ + + EP+GV G I PWNFP+ M KV PALA G T V+K AE TP
Sbjct: 177 HGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTP 235
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
L+AL A L HEA +P GVLNVV+ A G L + V ++FTGST GKI+
Sbjct: 236 LSALYAAKLLHEAGLPPGVLNVVSGFGPTA---GAALASHMDVDKLAFTGSTDTGKIVLE 292
Query: 264 HCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
++ +K ++LELGG +PFIV +A++ KAV A A F N GQ C A +R + E+V+
Sbjct: 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY 352
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE K K + GD K GP I+ Q EK+ ++ + GA + GG
Sbjct: 353 DEFVEKAKARALKRVV-GDPFKKG-VEQGPQIDSEQFEKILRYIKSGVESGATLECGGD- 409
Query: 383 VTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
+ GSK + PT+ +N+ DML +E+FGPV +KFK +E + ANN+ GLA
Sbjct: 410 --RFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAG 467
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT ++ A + + L+VG V +N + FGG K SG+GRE + + + Q+K
Sbjct: 468 VFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVK 526
|
Length = 538 |
| >gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Score = 317 bits (814), Expect = e-103
Identities = 155/458 (33%), Positives = 235/458 (51%), Gaps = 33/458 (7%)
Query: 50 PANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109
P E L ++P DV+ A A+ A W+ ER V R+ + + L +
Sbjct: 3 PFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLD 62
Query: 110 IMTQESGKPPTESLGEVV--------YANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161
++ E+GK + EV+ YA RR +P ++ R
Sbjct: 63 LIQLETGKARRHAFEEVLDVAIVARYYARRAERLLKPRRRRG---AIPVLTRTTVN---R 116
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKG 221
P GVVG+I+PWN+P+ + PAL AG V+KP T LTAL L EA +P+
Sbjct: 117 RPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRD 176
Query: 222 VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRL---SLELGG 278
+ VVT + VG + + + FTGST G+++ +RL SLELGG
Sbjct: 177 LWQVVTGP---GSEVGGAIVD--NADYVMFTGSTATGRVVAERAG---RRLIGCSLELGG 228
Query: 279 NAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFI 338
P IV +A+L KA +GA+ A F N GQ CV+ R + E V+D+FV V T++
Sbjct: 229 KNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRF-VARTRALR 287
Query: 339 QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTN 398
G + + ++G LI+ AQ+++V + V DA++KGA V+ GG LG F+ PT+LT
Sbjct: 288 LG-AALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTG 346
Query: 399 ITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQV 458
+T DM + EE FGPV + ++E++ +AN+++ GL +T D ++ R+ +L+
Sbjct: 347 VTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRA 406
Query: 459 GMVGINEGIIS---HTEAAFGGVKESGLGREGSRHGME 493
G V +NEG + +A GG+K+SGLGR RHG E
Sbjct: 407 GTVNVNEGYAAAWASIDAPMGGMKDSGLGR---RHGAE 441
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454 |
| >gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Score = 317 bits (813), Expect = e-103
Identities = 161/461 (34%), Positives = 243/461 (52%), Gaps = 19/461 (4%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106
V NPA + LA VP DV A+ +A+ AF +W TTP ER +L+ L + +
Sbjct: 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEE 60
Query: 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLM-VREPLG 165
LA I + G P + LG+V+ A + +D+F+ GE +P ++ L +REP G
Sbjct: 61 LALIDALDCGNPVSAMLGDVMVAAALLDYFAGLVTELKGETIPVGGRN--LHYTLREPYG 118
Query: 166 VVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225
VV I +N P+ K+A LAAG T V+KP E PL+AL LA LA E +P GV N+
Sbjct: 119 VVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNI 177
Query: 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285
+ A G L P V I+ GS G+ + ++GIK ++LELGG IV+
Sbjct: 178 LPGDGATA---GAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVF 234
Query: 286 SNANLQKAVSGAMAA-KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344
+A+ + A A+A F CGQ+C + +R + E ++D+ + + VE + GD +
Sbjct: 235 PDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARV-VERVAAIKVGDPT- 292
Query: 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV-TKLGSK--FFAPTILTNITP 401
+ +GPL++ Q ++V + A +GA+++ GGG+ + PT+ ++TP
Sbjct: 293 DPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTP 352
Query: 402 DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMV 461
M EE+FGPV ++++ E E + AN GL +TNDISQA R ++++ G V
Sbjct: 353 GMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYV 412
Query: 462 GINEGIISHTEAAFGGVKESGLGREGSRHGMEE---FTQIK 499
IN A FGGVK SG+GRE +EE +TQ K
Sbjct: 413 WINGSSRHFLGAPFGGVKNSGIGRE---ECLEELLSYTQEK 450
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456 |
| >gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Score = 316 bits (812), Expect = e-103
Identities = 161/481 (33%), Positives = 247/481 (51%), Gaps = 20/481 (4%)
Query: 30 TQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+ +INGEWV S + VYNPA E +A VP E+V A+ +AK AF WS T
Sbjct: 1 LKLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVL 60
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
+R V+ ++ + LE N LA ++T E GK ++ G+V+ V++ GE
Sbjct: 61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEY 120
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR-KVAPALAAGCTCVIKPAEDTPLTA 206
+ + + + R+PLGVV ITP+NFP AMI A+A G T V+KP+E P A
Sbjct: 121 LENVARGIDTYSYRQPLGVVAGITPFNFP-AMIPLWMFPMAIACGNTFVLKPSERVPGAA 179
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
+ LA L EA +P GVLNVV + N+ L P + +SF GST VG+ +Y +
Sbjct: 180 MRLAELLQEAGLPDGVLNVVHGGKEAVNA----LLDHPDIKAVSFVGSTPVGEYIYERAA 235
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
KR+ G +V +A+L++ + + A F GQ C+A + + D+++
Sbjct: 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWI 295
Query: 327 EMLKVEITKSFI-QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
L K + GD D +GP+I+ A E+++ +++ + +GAK++L G V
Sbjct: 296 PKLVERAKKLKVGAGDDPGAD---MGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKV 352
Query: 386 LGSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G + F PTIL N+TPDM Y EE+FGPV ++ T +E++ + N + G F
Sbjct: 353 PGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIF 412
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEE---FTQI 498
T + A + +++ GMVGIN I +FGG K S G + +G + +TQ
Sbjct: 413 TRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFG-DLHFYGKDGVRFYTQT 471
Query: 499 K 499
K
Sbjct: 472 K 472
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 305 bits (784), Expect = e-100
Identities = 120/258 (46%), Positives = 162/258 (62%), Gaps = 3/258 (1%)
Query: 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSF 132
+A+ AF+ W+ P ER +L++ LE ++ LA + T E+GKP E+LGEV A
Sbjct: 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDT 61
Query: 133 VDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGC 192
+ + A + G +PSP E + REPLGVVG+ITPWNFP+ + K+APALAAG
Sbjct: 62 FRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGN 121
Query: 193 TCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFT 252
T V+KP+E TPLTALALA L EA +P GV+NVV + VG L + P V ISFT
Sbjct: 122 TVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG---GDEVGAALLSHPRVDKISFT 178
Query: 253 GSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312
GST VGK + ++ +K ++LELGG +P IV +A+L AV GA+ F N GQ C AA
Sbjct: 179 GSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAA 238
Query: 313 NRFLIQEQVFDQFVEMLK 330
+R L+ E ++D+FVE L
Sbjct: 239 SRLLVHESIYDEFVEKLV 256
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Score = 303 bits (779), Expect = 3e-98
Identities = 141/454 (31%), Positives = 225/454 (49%), Gaps = 8/454 (1%)
Query: 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107
+P + +A+ P +E V+ A+ A+ A + W +ER ++ R ++ L N +
Sbjct: 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEI 60
Query: 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVV 167
AE +T + G+P ++ GE+ + A ++ E + REPLGVV
Sbjct: 61 AEELTWQMGRPIAQAGGEIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVV 120
Query: 168 GLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVT 227
+I PWN+P V PAL AG ++K + TPL AA EA +P+GV V+
Sbjct: 121 LIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLH 180
Query: 228 SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSN 287
S + L P + +SFTGS G+ + + ++ LELGG P V +
Sbjct: 181 LS----HETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236
Query: 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347
A+L A + F N GQ+C + R + E ++D FVE V + K + GD
Sbjct: 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAF-VAVVKGYKLGDPLDPST 295
Query: 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK--VTKLGSKFFAPTILTNITPDMLC 405
LGP+++ + V + + DAI+KGA+ ++ G K G + APT+LTN+ M
Sbjct: 296 -TLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRV 354
Query: 406 YTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINE 465
EE FGPV +K K++ E++ + N+S GL +T DI++A +G++L+ G V +N
Sbjct: 355 MREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNR 414
Query: 466 GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
A+ GVK+SG G SR G ++ T+ K
Sbjct: 415 CDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPK 448
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452 |
| >gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Score = 305 bits (783), Expect = 4e-98
Identities = 157/466 (33%), Positives = 239/466 (51%), Gaps = 25/466 (5%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I G+ V + +K NPA+ E L V E+ + A+ +A+ AF W +T P+ER
Sbjct: 36 VIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTWRRTPPEERAR 95
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L R L + LA M E GK E+ +V A F+++++ E R
Sbjct: 96 LLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLR-LRGFPVEM 154
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211
V ++ V PLGV +I+PWNFP+A++ AL G T V+KPAEDTP+ A L
Sbjct: 155 VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVE 214
Query: 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG--- 268
+ EA +P GV+N + VG L P V I+FTGS +VG +Y ++
Sbjct: 215 ILEEAGLPPGVVNFLPGP---GEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPG 271
Query: 269 ---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
+KR+ E+GG IV +A+L +A G + + F GQ C A +R ++ E V+D+F
Sbjct: 272 QKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEF 331
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
+E L VE TK+ GD + +GP+I+ +++ ++ S+G +++LGG V +
Sbjct: 332 LERL-VERTKALKVGDPEDPE-VYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGE-VLE 387
Query: 386 LGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
L ++ F PTI ++ PD EE+FGPV IK K +E+L +AN++ GL G F+
Sbjct: 388 LAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFS 447
Query: 444 NDISQAWRVGKKLQVGMVGINEGIISHTEA-----AFGGVKESGLG 484
R ++ +VG + N I T A FGG K SG G
Sbjct: 448 RSPEHLERARREFEVGNLYANRKI---TGALVGRQPFGGFKMSGTG 490
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512 |
| >gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Score = 299 bits (766), Expect = 3e-96
Identities = 172/475 (36%), Positives = 255/475 (53%), Gaps = 12/475 (2%)
Query: 31 QAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
+ INGE V +K PVYNPA E + ++ + E V A+ +A AF +W QTTPK R
Sbjct: 3 KLLINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKAR 62
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVD---WFSEEARRTYGE 146
L + +E N Q AE+ ++ GKP + + A VD +F+ AR G
Sbjct: 63 AECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPA--IVDVFRFFAGAARCLSGL 120
Query: 147 LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
++ ++ R+PLGVV I PWN+P+ M K+APALAAG V+KP+E TPLTA
Sbjct: 121 AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 180
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
L LA LA + P GV+N++ +VG L V +S TGS G+ + SH +
Sbjct: 181 LKLAELAKDI-FPAGVVNILFG---RGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
IKR +ELGG AP IV+ +A++ V G F N GQ C AA R Q ++D V
Sbjct: 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLV 296
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
E L + + ++ ++ LGPL +LA +E+V V++A + G ++ GG+ K
Sbjct: 297 EKLGAAV--ATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG 354
Query: 387 GSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446
+FAPT+L D +EVFGPV F EE+ + AN+S GLA +T D+
Sbjct: 355 NGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDV 414
Query: 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
+A R+ +LQ G +N + +E GG K SG G++ S +G+E++T ++++
Sbjct: 415 GRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHI 469
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472 |
| >gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Score = 295 bits (758), Expect = 9e-96
Identities = 143/411 (34%), Positives = 230/411 (55%), Gaps = 7/411 (1%)
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L++ + ++ ++ +E GK + EV + ++D+ +E ARR GE++ S
Sbjct: 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDR 60
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212
+ +L+ + LGV I PWNFP +I RK+APAL G T VIKP+E TP A+A A +
Sbjct: 61 PGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKI 120
Query: 213 AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRL 272
E +PKGV N+V +VG+ L +P VA +S TGS G+ + + ++ I ++
Sbjct: 121 VDEIGLPKGVFNLVLGR---GETVGQELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKV 177
Query: 273 SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE 332
LELGG AP IV +A+L AV + ++ N GQ C A R +Q+ ++DQFV L E
Sbjct: 178 CLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRL-GE 236
Query: 333 ITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392
++ G+ ++ + +GPLIN A +E+V+ V A+ +GA+V LGG V G ++
Sbjct: 237 AMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGY-YYP 295
Query: 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRV 452
PT+L ++ +M EE FGPV + F T EE++ +AN+S+ GL +T +++ A +
Sbjct: 296 PTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKA 355
Query: 453 GKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF--TQIKYM 501
K L+ G IN + G ++SG+G +HG+ E+ TQ+ Y+
Sbjct: 356 IKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYL 406
|
Length = 409 |
| >gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family | Back alignment and domain information |
|---|
Score = 290 bits (745), Expect = 6e-93
Identities = 162/487 (33%), Positives = 241/487 (49%), Gaps = 30/487 (6%)
Query: 30 TQAYINGEWVH-SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTP 86
++ I+G+ V S+ FP NPA +E L D D+ AI +A+ AF++ WS+ T
Sbjct: 1 SRLLIDGKLVAGSAGTFPTVNPATEEVLGVAADATAADMDAAIAAARRAFDETDWSRDT- 59
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKP-----------PTESLGEVVYANSFVDW 135
R L++ L + + L E+ E G P P + LG W
Sbjct: 60 ALRVRCLRQLRDALRAHVEELRELTIAEVGAPRMLTAGAQLEGPVDDLGFAADLAESYAW 119
Query: 136 FSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCV 195
G P + ++ L RE +GVVG ITPWNFP + K+ PALAAG T V
Sbjct: 120 -----TTDLGVASPMGIPTRRTL-RREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVV 173
Query: 196 IKPAEDTPLTALALAAL-AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGS 254
+KPA DTP A L L A P GV+N+VTSS + +G LL P V +SFTGS
Sbjct: 174 LKPAPDTPWCAAVLGELIAEHTDFPPGVVNIVTSSD---HRLGALLAKDPRVDMVSFTGS 230
Query: 255 TQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314
T G+ + + + +K++ LELGG + FIV +A+L A S A + GQ C R
Sbjct: 231 TATGRAVMADAAATLKKVFLELGGKSAFIVLDDADLAAACSMAAFTVCMHAGQGCAITTR 290
Query: 315 FLIQEQVFDQFVEMLKVEITKSFIQGD-TSKNDKCNLGPLINLAQVEKVDSIVQDAISKG 373
++ +D+ V S GD C GP+I+ Q ++V S + A+++G
Sbjct: 291 LVVPRARYDEAVAAA-AATMGSIKPGDPADPGTVC--GPVISARQRDRVQSYLDLAVAEG 347
Query: 374 AKVILGGGKVTKLGSKFFA-PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432
+ GGG+ FF PT++ + + EE+FGPV I +++++ +AN+
Sbjct: 348 GRFACGGGRPADRDRGFFVEPTVIAGLDNNARVAREEIFGPVLTVIAHDGDDDAVRIAND 407
Query: 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGM 492
S GL+G F D +A V +++ G V +N G+ +A FGG K+SG+GRE G
Sbjct: 408 SPYGLSGTVFGADPERAAAVAARVRTGTVNVNGGVWYSADAPFGGYKQSGIGREMGVAGF 467
Query: 493 EEFTQIK 499
EE+ + K
Sbjct: 468 EEYLETK 474
|
This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480 |
| >gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Score = 288 bits (739), Expect = 4e-92
Identities = 170/485 (35%), Positives = 256/485 (52%), Gaps = 29/485 (5%)
Query: 33 YINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I GEWV K F P + +VP ED++ A+ +A A E W +T+ ER
Sbjct: 4 FIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERA 63
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVP 149
+L + +E N + LA T ++GKP E+L ++ A +F+ R G +
Sbjct: 64 NILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSI-- 121
Query: 150 SPVKSKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
S + + EPLGVVG I PWNFP+ M T K+APALAAG V+KPAE TP + L
Sbjct: 122 SEIDENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILV 181
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
L L + +P GV+NVV A GK L +S +A ++FTG T G+++ + S+
Sbjct: 182 LMELIGDL-LPPGVVNVVNGFGLEA---GKPLASSKRIAKVAFTGETTTGRLIMQYASEN 237
Query: 269 IKRLSLELGGNAPFIVYS------NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
I ++LELGG +P I ++ +A KA+ G + N G+ C +R LIQE ++
Sbjct: 238 IIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY 296
Query: 323 DQFVEMLKVEITKSFIQG---DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379
D+F+E +E K+ QG DT +G +L Q+EK+ S + +GA+V+ G
Sbjct: 297 DRFME-RALERVKAIKQGNPLDTE----TMIGAQASLEQLEKILSYIDIGKEEGAEVLTG 351
Query: 380 GGKVT---KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
G + LG ++ PT M + EE+FGPV FK EEE+L +AN++ G
Sbjct: 352 GERNELGGLLGGGYYVPTTFKG-GNKMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYG 410
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496
L +T D + A+R+G+ +Q G V N + AAFGG K+SG+GRE + ++ +
Sbjct: 411 LGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQ 470
Query: 497 QIKYM 501
Q K +
Sbjct: 471 QTKNL 475
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479 |
| >gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 286 bits (734), Expect = 1e-91
Identities = 158/456 (34%), Positives = 231/456 (50%), Gaps = 15/456 (3%)
Query: 49 NPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108
NPA E + + ++V AI A F + TT +R LE +A
Sbjct: 7 NPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVA 66
Query: 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP-----VKSKELLMVREP 163
+MT E GK + E + +++E A L P V + + +P
Sbjct: 67 ALMTLEMGKTLASAKAEALKCAKGFRYYAEHAEAL---LADEPADAAAVGASRAYVRYQP 123
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
LGVV + PWNFP+ + R APAL AG ++K A + P TAL LA L A P G
Sbjct: 124 LGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCF 183
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283
+ + +V +L P VA + TGS G+ + + IK+ LELGG+ PFI
Sbjct: 184 QTLLVG---SGAVEAIL-RDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPFI 239
Query: 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343
V +A+L +A A+ A+ +N GQ+C+AA RF++ V+D F E V + GD +
Sbjct: 240 VMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKF-VARMAALRVGDPT 298
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM 403
+ ++GPL ++V+ V DA++ GA ++ GG + G F+ PT++T+ITPDM
Sbjct: 299 -DPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGW-FYPPTVITDITPDM 356
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
YTEEVFGPVA + +E++ +AN + GL +T D ++ R L+ G V I
Sbjct: 357 RLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFI 416
Query: 464 NEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
N +S+ E FGGVK SG GRE S HG+ EF IK
Sbjct: 417 NGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIK 452
|
Length = 457 |
| >gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Score = 282 bits (724), Expect = 7e-90
Identities = 148/474 (31%), Positives = 241/474 (50%), Gaps = 29/474 (6%)
Query: 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107
Y+PA +HL VP EDV AI +A+ A +W++T+ ER VL+ LK + N++ +
Sbjct: 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEI 60
Query: 108 AEIMTQESGKPPTE-SLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR----- 161
+ +++GK + SLGE++ + W + + L P L+ +
Sbjct: 61 CRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKA---LRPESRPGGLLMFYKRARVE 117
Query: 162 -EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT-----PLTALALAALAHE 215
EPLGVVG I WN+P + + AL AG V+K +E ++ LA
Sbjct: 118 YEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAAC 177
Query: 216 AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE 275
P V V T + L + P + I+F GS VGK + + ++ + + LE
Sbjct: 178 GHDPDLVQLVTCLPET-----AEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLE 232
Query: 276 LGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITK 335
LGG P IV +A+L + S M F++ GQ C+ R ++ E+++D+ +E+L + +
Sbjct: 233 LGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILT-DRVQ 291
Query: 336 SFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK----FF 391
+ QG D ++G +I+ A+ ++++ +V DA+ KGA+ +L GGK +F
Sbjct: 292 ALRQGPPLDGD-VDVGAMISPARFDRLEELVADAVEKGAR-LLAGGKRYPHPEYPQGHYF 349
Query: 392 APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWR 451
PT+L ++TPDM EEVFGPV V +K +EE++ +AN++ GL F DI +A R
Sbjct: 350 PPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARR 409
Query: 452 VGKKLQVGMVGINEGIISHTEAA--FGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+ +L+ GMV IN+ +++ FGGVK SG GR G+ K +
Sbjct: 410 IASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTE 463
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465 |
| >gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 281 bits (721), Expect = 1e-89
Identities = 153/452 (33%), Positives = 252/452 (55%), Gaps = 10/452 (2%)
Query: 49 NPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108
NPA E L+ +P G +D++ A+ A F W +T R L+ K L + +A
Sbjct: 13 NPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMA 72
Query: 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVG 168
+++T+E GKP ++ EV + + DW++E + P+ V++++ ++ PLG +
Sbjct: 73 QMITREMGKPINQARAEVAKSANLCDWYAEHGPAML-KAEPTLVENQQAVIEYRPLGTIL 131
Query: 169 LITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTS 228
I PWNFP+ + R P L AG ++K A + A +A + +A IP+GV +
Sbjct: 132 AIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWL-- 189
Query: 229 SRTNANSVG-KLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSN 287
NA++ G + +A ++ TGS + G + + +K+ LELGG+ PFIV ++
Sbjct: 190 ---NADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPFIVLND 246
Query: 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347
A+L+ AV A+A +++N GQ C AA RF+I+E + F E V + GD ++++
Sbjct: 247 ADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERF-VAAAAALKMGD-PRDEE 304
Query: 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYT 407
LGP+ +++ V+ +++GA+++LGG K+ G+ ++APT+L N+TP+M +
Sbjct: 305 NALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGN-YYAPTVLANVTPEMTAFR 363
Query: 408 EEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGI 467
EE+FGPVA K E +L +AN+S GL+ FT D +QA ++ +L+ G V IN
Sbjct: 364 EELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYC 423
Query: 468 ISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
S AFGGVK+SG GRE S G+ EF I+
Sbjct: 424 ASDARVAFGGVKKSGFGRELSHFGLHEFCNIQ 455
|
Length = 462 |
| >gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 274 bits (703), Expect = 7e-87
Identities = 168/474 (35%), Positives = 259/474 (54%), Gaps = 23/474 (4%)
Query: 34 INGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVL 93
I GE V + V P N + VP V+DV+ A A A+ T ER +L
Sbjct: 8 IAGEKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAA-AYR--PTLTRYERSAIL 64
Query: 94 KRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE-----LV 148
R L K+ +++++T ESG +SL EV + + + EA R G+ L
Sbjct: 65 DRAAALLAARKEEISDLITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLT 124
Query: 149 PSPVKSKELLMVREPL-GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
P K++++ REPL GV+ ITP+N PM + K+APA+A V+KP+E TPL+AL
Sbjct: 125 PHG-KARKVFTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSAL 183
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
LA + +EA +P +L VVT + + L T+PHV ++FTG +GK + +
Sbjct: 184 YLADILYEAGLPPQMLQVVTG---DPREIADELITNPHVDLVTFTGGVAIGKYIAARA-- 238
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
G +R LELGGN P IV +A+L +A A+ ++N GQ C A R L+QE V D+F E
Sbjct: 239 GYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTE 298
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
+L VE T+++ GD + ++G +I+ A ++ V +AI++GA+++LG + L
Sbjct: 299 LL-VEKTRAWRYGDPM-DPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGAL- 355
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
+APT+L + P M EE FGPV+ I+F ++++ ++N++ GL+ TN +
Sbjct: 356 ---YAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLD 412
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLG-REGSRHGMEEFTQIK 499
R +LQVG V + E E FGG+K+SGLG +EG + M+ FT +K
Sbjct: 413 YITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLK 466
|
This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472 |
| >gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 269 bits (689), Expect = 4e-84
Identities = 149/469 (31%), Positives = 232/469 (49%), Gaps = 37/469 (7%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I GE + + K NPAN E + V E + A+ +A EAFE W + +P++R
Sbjct: 40 IIGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFETWKKWSPEDRAR 99
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L R + K + + +E+GKP E+ + A F+++++ + + + P
Sbjct: 100 ILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLK-LAD--GKP 156
Query: 152 VKSKE---LLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
V+S+ PLGV +I+PWNFP A++ A+ AG T ++KPA DTP+ A
Sbjct: 157 VESRPGEHNRYFYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAK 216
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS-- 266
+ EA +P GV+N V S + VG L P I+FTGS +VG +Y +
Sbjct: 217 FVEVLEEAGLPAGVVNFVPGS---GSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKV 273
Query: 267 ----QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+KR+ E+GG +V +A+L A +A+ F GQ C A +R ++ E V+
Sbjct: 274 QPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY 333
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGG 381
D+ +E + VE+TK G+ N +GP+IN A +K+ S ++ I K +++LGG
Sbjct: 334 DEVLEKV-VELTKELTVGNPEDNA--YMGPVINQASFDKIMSYIE--IGKEEGRLVLGGE 388
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PTI ++ P EE+FGPV IK K + +L +ANN+ GL G
Sbjct: 389 GDDSKGY-FIQPTIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAV 447
Query: 442 FTND---ISQAWRVGKKLQVGMVGINEGIISHTEA-----AFGGVKESG 482
+N+ + +A R + VG + N G T A FGG SG
Sbjct: 448 ISNNREHLEKARR---EFHVGNLYFNRGC---TGAIVGYHPFGGFNMSG 490
|
Length = 514 |
| >gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Score = 261 bits (669), Expect = 1e-81
Identities = 159/470 (33%), Positives = 230/470 (48%), Gaps = 28/470 (5%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
+GEW +PAN E +A V ED + I +A+EAF++W +RG +
Sbjct: 2 VYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEI 61
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA----RRTYGELV 148
+++ L K+AL ++++ E GK E LGEV +D + A R+ YG +
Sbjct: 62 VRQIGDALRKKKEALGKLVSLEMGKILPEGLGEV---QEMID-ICDFAVGLSRQLYGLTI 117
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
PS ++ PLGVVG+IT +NFP+A+ A AL G V KP+ TPLTA+A
Sbjct: 118 PSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIA 177
Query: 209 ----LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
+A + + +P + ++V VG+ L P V +SFTGST VG+ +
Sbjct: 178 VTKIVARVLEKNGLPGAIASLVCGGAD----VGEALVKDPRVPLVSFTGSTAVGRQVGQA 233
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
+ R LELGGN IV +A+L AV + A GQ C R ++ E ++D+
Sbjct: 234 VAARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDE 293
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNL-GPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+E LK + K GD + L GPL A V+ + +++A S+G +L GGKV
Sbjct: 294 VLERLK-KAYKQVRIGDPLDDG--TLVGPLHTKAAVDNYLAAIEEAKSQGGT-VLFGGKV 349
Query: 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
+ PTI+ D EE F P+ +KF T EE++ N GL+ FT
Sbjct: 350 IDGPGNYVEPTIVE-GLSDAPIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFT 408
Query: 444 NDISQA--WRVGKKLQVGMVGINEGIISHTE--AAFGGVKESGLGRE-GS 488
D+ A W K G+V +N G S E AFGG KE+G GRE GS
Sbjct: 409 TDLRNAFRWLGPKGSDCGIVNVNIG-TSGAEIGGAFGGEKETGGGRESGS 457
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474 |
| >gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 243 bits (621), Expect = 1e-74
Identities = 150/477 (31%), Positives = 234/477 (49%), Gaps = 19/477 (3%)
Query: 33 YINGEWVH--SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I G++ S PV NPA +E V V++V A+ SA+E F W QT+ +R
Sbjct: 4 WIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRT 63
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
VL R+ L+ ++ +AE++T E GK +++LG+V V+ GE
Sbjct: 64 SVLLRYQALLKEHRDEIAELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQ 123
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP-ALAAGCTCVIKPAEDTPLTALAL 209
++ +R+PLGV ITP+NFP AMI + P A+A G T V+KP+E P A+ L
Sbjct: 124 VATRVDVYSIRQPLGVCAGITPFNFP-AMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKL 182
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A L EA P GVLNVV + + L P V +SF GST +G+ +++ S
Sbjct: 183 AELFSEAGAPDGVLNVVHGDKEAVDR----LLEHPDVKAVSFVGSTPIGRYIHTTGSAHG 238
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+ G +V +A+ A + A + GQ C+A + ++ D++V +
Sbjct: 239 KRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEI 297
Query: 330 KVEITKSFIQ-GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG- 387
+ K I GD + +GPLI ++V S++ ++GA+V+L G G
Sbjct: 298 RERAEKIRIGPGDDPGAE---MGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGY 354
Query: 388 --SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ PT+L + P M Y EE+FGPV ++ T EE++ + N S G FT D
Sbjct: 355 EEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRD 414
Query: 446 ISQAWRVGKKLQVGMVGINEGI-ISHTEAAFGGVKESGLGREG--SRHGMEEFTQIK 499
+ A R +++VG VG+N I + +F G K+S G + G +T+ K
Sbjct: 415 GAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGK 471
|
Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477 |
| >gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Score = 241 bits (616), Expect = 4e-74
Identities = 146/468 (31%), Positives = 234/468 (50%), Gaps = 26/468 (5%)
Query: 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK-ERGIVLKRWLKELEGNKQ 105
V NP + + + +VP + + A+ +A F + P ER +L+R +E
Sbjct: 3 VVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERAD 62
Query: 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP---SPVKSKEL-LMVR 161
LA ++ +E GKP ++ EV A V+ ++E + G +P +P + + R
Sbjct: 63 ELALLIAREGGKPLVDAKVEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTR 122
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKG 221
EP+GVV I+ +N P+ +I +VAPA+AAGC ++KPA TPL+ LA L HEA +P+G
Sbjct: 123 EPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEG 182
Query: 222 VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP 281
V N+V + L T P VA SF GS +VG +L S + G R +LE GG AP
Sbjct: 183 WCQAVPC----ENAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAPG-TRCALEHGGAAP 237
Query: 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341
IV +A+L + + F + GQ CV+ R + ++ D F + L + + GD
Sbjct: 238 VIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRL-AAAAEKLVVGD 296
Query: 342 -TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
T + + GPLI +V++V+ V +A++ GA+++ GG +L +APT+L +
Sbjct: 297 PTDPDTEV--GPLIRPREVDRVEEWVNEAVAAGARLLCGG---KRLSDTTYAPTVLLDPP 351
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
D T+E+FGPV + +E++ AN+ FT D+ A + ++L
Sbjct: 352 RDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATA 411
Query: 461 VGINEGIISHTE-----AAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
V +N+ HT F G ++SG G G + M + TQ K
Sbjct: 412 VMVND----HTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455 |
| >gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Score = 240 bits (615), Expect = 2e-73
Identities = 136/461 (29%), Positives = 221/461 (47%), Gaps = 16/461 (3%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
INGE V + K NP + E + V E ++A+ +A +AFE W +T P+ER
Sbjct: 36 VINGERVETENKIVSINPCDKSEVVGTVSKASQEHAEHALQAAAKAFEAWKKTDPEERAA 95
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L + + + + ++ +E GKP E+ EV A F+++++ + +
Sbjct: 96 ILFKAAAIVRRRRHEFSALLVKEVGKPWNEADAEVAEAIDFMEYYARQMIELAKGKPVNS 155
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211
+ + V P GV +I+PWNFP A++ + G V+KPAE P+ A
Sbjct: 156 REGETNQYVYTPTGVTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVE 215
Query: 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS----- 266
+ EA +PKGV+ V S + VG L P + I+FTGS +VG ++ +
Sbjct: 216 ILEEAGLPKGVVQFVPGS---GSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPG 272
Query: 267 -QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
+ +KR+ E+GG IV +A+++ A A + F GQ C A +R ++ E+V+D+
Sbjct: 273 QKHLKRVIAEMGGKDTVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEV 332
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
VE VEIT+S G D +GP+I+ K+ ++ ++G +++ GG
Sbjct: 333 VERF-VEITESLKVGPPDSAD-VYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDS 389
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
G F PTI ++ EE+FGPV I+ +E+L +ANN+ GL G +N+
Sbjct: 390 KGY-FIGPTIFADVDRKARLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNN 448
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEA--AFGGVKESGLG 484
R + +VG + N I FGG K SG
Sbjct: 449 RDHINRAKAEFEVGNLYFNRNITGAIVGYQPFGGFKMSGTD 489
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511 |
| >gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Score = 230 bits (590), Expect = 2e-70
Identities = 132/420 (31%), Positives = 209/420 (49%), Gaps = 36/420 (8%)
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTES--------LGEVVYA-NSFVDWFSEEARRT 143
LK + L N++ +A + + GKPP E+ LGE+ +A W + RR
Sbjct: 26 LKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWM--KPRRV 83
Query: 144 YGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
L+ P K+ ++ EPLGVV +I PWN+P+ + + A+AAG T V+KP+E P
Sbjct: 84 SVPLLLQPAKAY---VIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAP 140
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSP--HVAGISFTGSTQVGKIL 261
T+ LA L + + VV V L P H I FTGS VGKI+
Sbjct: 141 ATSALLAKLIPKY-FDPEAVAVVEG----GVEVATALLAEPFDH---IFFTGSPAVGKIV 192
Query: 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
++ + ++LELGG +P IV +ANL+ A KF N GQ C+A + L+ E +
Sbjct: 193 MEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESI 252
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
D+ +E LK I K F D ++ + G +IN +++ S++ D KV++GG
Sbjct: 253 KDELIEELKKAI-KEFYGEDPKESP--DYGRIINERHFDRLASLLDD-----GKVVIGGQ 304
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
++ APTIL +++PD EE+FGP+ + + +E++ N+ LA Y
Sbjct: 305 --VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYL 362
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
F+ D + RV + G V +N+ ++ + FGGV SG+G + G + F+ +K
Sbjct: 363 FSEDKAVQERVLAETSSGGVCVNDVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLK 422
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426 |
| >gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Score = 226 bits (578), Expect = 1e-68
Identities = 136/442 (30%), Positives = 210/442 (47%), Gaps = 43/442 (9%)
Query: 75 KEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTE-SLGEV--VYANS 131
+ +T ER LKR K + ++ + + + KP E L E+ V +
Sbjct: 8 QAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLS-- 65
Query: 132 FVDWFSEEARRTYGEL--------VPSPV-----KSKELLMVREPLGVVGLITPWNFPMA 178
E L V +P+ KSK + EP GV +I+PWN+P
Sbjct: 66 -------EINHAIKHLKKWMKPKRVRTPLLLFGTKSK---IRYEPKGVCLIISPWNYPFN 115
Query: 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGK 238
+ + A+AAG T ++KP+E TP T+ +A + EA V + V +
Sbjct: 116 LAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREAFDEDEV-----AVFEGDAEVAQ 170
Query: 239 LLCTSP--HVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296
L P H I FTGS VGKI+ + ++ + ++LELGG +P IV A+L+KA
Sbjct: 171 ALLELPFDH---IFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227
Query: 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINL 356
KF N GQ C+A + + E V D FVE LK EI K + + K +L ++N
Sbjct: 228 IAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGKDAARK-ASPDLARIVND 286
Query: 357 AQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAV 416
+++ ++ DA++KGAKV GG ++ APT+LTN+TPDM EE+FGPV
Sbjct: 287 RHFDRLKGLLDDAVAKGAKVEFGG--QFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLP 344
Query: 417 CIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAA 474
I ++ +E + N LA Y F+ D + +V + G V +N+ ++ +
Sbjct: 345 IITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVLHFLNPNLP 404
Query: 475 FGGVKESGLGREGSRHGMEEFT 496
FGGV SG+G +G + F+
Sbjct: 405 FGGVNNSGIGSYHGVYGFKAFS 426
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433 |
| >gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Score = 221 bits (566), Expect = 5e-67
Identities = 131/433 (30%), Positives = 212/433 (48%), Gaps = 24/433 (5%)
Query: 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE 125
V A+ +A+ AF W+ + +ER +L+R+ + L+ NK+ LA ++++E+GKP E+ E
Sbjct: 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTE 60
Query: 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185
V +D S +A +P+ ++ P GV+ + P+NFP + +
Sbjct: 61 VAAMAGKID-ISIKAYHERTGERATPMAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIV 119
Query: 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPH 245
PAL AG T V KP+E TP A + L EA +P GVLN+V R G+ L
Sbjct: 120 PALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRE----TGEALAAHEG 175
Query: 246 VAGISFTGSTQVGKILYSH-CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304
+ G+ FTGS G +L+ + K L+LE+GGN P +V+ A++ A + + F
Sbjct: 176 IDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235
Query: 305 CGQACVAANR-FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363
GQ C A R + V D F+E L VE K G +GPLI A +
Sbjct: 236 AGQRCTCARRLIVPDGAVGDAFLERL-VEAAKRLRIGAPDAEPP-FMGPLIIAAAAARYL 293
Query: 364 SIVQDAISKGAKVILGGGKVTKL--GSKFFAPTIL--TNIT--PDMLCYTEEVFGPVAVC 417
QD ++ G + +L + +L G+ F +P I+ T+ PD EE+FGP+
Sbjct: 294 LAQQDLLALGGEPLL---AMERLVAGTAFLSPGIIDVTDAADVPD-----EEIFGPLLQV 345
Query: 418 IKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFG 476
++ +E++ +AN + GL+ ++D + R +++ G+V N + + A FG
Sbjct: 346 YRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTTGASSTAPFG 405
Query: 477 GVKESGLGREGSR 489
GV SG R +
Sbjct: 406 GVGLSGNHRPSAY 418
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431 |
| >gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 219 bits (560), Expect = 2e-65
Identities = 151/478 (31%), Positives = 233/478 (48%), Gaps = 25/478 (5%)
Query: 33 YINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
Y +GEW SS K + NP+ + V E+V A+ SAK A + W++T +R
Sbjct: 19 YADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRA 78
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE---L 147
+L + L+ +K +AE + +E KP +++ EVV + + + +EE R GE L
Sbjct: 79 ELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFL 138
Query: 148 V----PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
V P ++K L + PLGVV I P+N+P+ + K+APAL AG V+KP
Sbjct: 139 VSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGA 198
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
+ AL + H A PKG+++ VT + +G L P V ISFTG G +
Sbjct: 199 VAALHMVHCFHLAGFPKGLISCVTG---KGSEIGDFLTMHPGVNCISFTG----GDTGIA 251
Query: 264 HCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ G+ L +ELGG IV +A+L A + + F GQ C A L+ E V
Sbjct: 252 ISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA 311
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D VE + ++ K + D C++ P+++ + ++ +V DA KGA +
Sbjct: 312 DALVEKVNAKVAKLTV---GPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFC----Q 364
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
K P +L N+ PDM EE FGPV I+ + EE + N SN GL G F
Sbjct: 365 EWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVF 424
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEA-AFGGVKESGLGREGSRHGMEEFTQIK 499
T DI++A + ++ G V IN + F G+K+SG+G +G + + T++K
Sbjct: 425 TRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVK 482
|
Length = 496 |
| >gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 6e-65
Identities = 147/470 (31%), Positives = 226/470 (48%), Gaps = 39/470 (8%)
Query: 34 INGEWVHSSKKFPVYNPANDE-HLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
INGE + + PV +PA+ E + +V EDV A+ A AF WS T +ER +
Sbjct: 37 INGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAGWSATPVEERAEI 96
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE-LVPSP 151
L++ LE N+ L + E+GK ++ EV A F +++ +AR + + +P P
Sbjct: 97 LEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGP 156
Query: 152 V-KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
+ L + GV I+PWNFP+A+ T ++A ALAAG T + KPAE TPL A
Sbjct: 157 TGELNGLEL--HGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAV 214
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ--- 267
L HEA +P+ VL +V +G+ L P + G+ FTGST+ K++ ++
Sbjct: 215 ELLHEAGVPRDVLQLVPGDG---EEIGEALVAHPRIDGVIFTGSTETAKLINRALAERDG 271
Query: 268 GIKRLSLELGG-NAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
I L E GG NA IV S A ++AV + + F + GQ C A +QE++ ++F+
Sbjct: 272 PILPLIAETGGKNA-MIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFI 330
Query: 327 EMLKVEITKSFIQGDTS--KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
EMLK S GD D +GPLI+ + + + + + +G ++ +
Sbjct: 331 EMLK-GAMASLKVGDPWDLSTD---VGPLIDKPAGKLLRAHTE--LMRGEAWLIAPAPLD 384
Query: 385 KLGSKFFAPTI--LTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSNTGLAGY 440
F AP I + I T EVFGP+ I+FK E +E++ N + GL
Sbjct: 385 DGNGYFVAPGIIEIVGIF----DLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLG 440
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA------FGGVKESGLG 484
+ D + ++++ G + IN I A FGG SG G
Sbjct: 441 IHSRDEREIEYWRERVEAGNLYINRNIT----GAIVGRQPFGGWGLSGTG 486
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518 |
| >gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Score = 216 bits (552), Expect = 7e-65
Identities = 132/419 (31%), Positives = 219/419 (52%), Gaps = 35/419 (8%)
Query: 94 KRWLKEL----EGNKQALAEIMTQESGKPPTESL--------GEVVYANSFVDWFSEEAR 141
LK+L + N++A+ E + ++ G+PP E+L ++++ + ++++ +
Sbjct: 30 LWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEK 89
Query: 142 RTYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
G L K + +R EPLGVV +I PWN+P+ + + A+AAGCT V+KP+E
Sbjct: 90 VKDGPLAFMFGKPR----IRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSE 145
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL-CTSPHVAGISFTGSTQVGK 259
TP TA LA L + + VV LL I +TGS +VG+
Sbjct: 146 LTPHTAALLAELVPKY-LDPDAFQVVQGG---VPETTALLEQKFDK---IFYTGSGRVGR 198
Query: 260 ILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQE 319
I+ ++ + ++LELGG +P IV NA+L+ A + KF N GQ CVA + L+
Sbjct: 199 IIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDP 258
Query: 320 QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379
V+D+FVE LK + + + G + D ++N ++ S++ +KG KV++G
Sbjct: 259 SVYDEFVEELKKVLDEFYPGGANASPD---YTRIVNPRHFNRLKSLLDT--TKG-KVVIG 312
Query: 380 GGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439
G ++F PTI+++++ D +EE+FGPV IK +E++ V N+ +T LA
Sbjct: 313 G--EMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLAL 370
Query: 440 YFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFT 496
Y FT+D S+ + + + G V IN+ +I A FGGV +SG G ++G + FT
Sbjct: 371 YIFTDDKSEIDHILTRTRSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFT 429
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436 |
| >gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Score = 217 bits (555), Expect = 8e-65
Identities = 137/482 (28%), Positives = 226/482 (46%), Gaps = 24/482 (4%)
Query: 33 YINGEWVHSSKKFPVYNPANDEH-LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I GEWV + ++ +P + + + A+ +A AF+ W ++R
Sbjct: 22 VIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRAR 81
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG---ELV 148
+L + L ++ L +T E GK E++ +V A F+ +++ A R E+V
Sbjct: 82 LLLKAADLLRRRRRELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVV 141
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
P P + E V LG +I+PWNFP+A+ T + +A G T + KPAED +
Sbjct: 142 PYPGEDNESFYV--GLGAGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYK 199
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
+ + HEA P GV+ + VG L + GI+FTGS + GK +Y ++
Sbjct: 200 VFEIFHEAGFPPGVVQFLPGV---GEEVGAYLTEHERIRGINFTGSLETGKKIYEAAARL 256
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
KRL +E GG IV A+ + V G + + F GQ C AA+R ++ + +
Sbjct: 257 APGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY 316
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
+ +E L + + G +N +LGP+I+ Q KV S ++ ++G ++ GGK
Sbjct: 317 EPVLERLLKRAERLSV-GPPEEN-GTDLGPVIDAEQEAKVLSYIEHGKNEGQ--LVLGGK 372
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE--ESLCVANNSNTGLAGY 440
+ F APT++ + P EE+FGPV I++K ++ E+L VAN++ GL G
Sbjct: 373 RLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGG 432
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHT--EAAFGGVKESGLG-REGSRHGMEEFTQ 497
++ ++ VG + IN I FGG K SG + G H + F +
Sbjct: 433 VYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLRRFLE 492
Query: 498 IK 499
+K
Sbjct: 493 MK 494
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500 |
| >gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Score = 210 bits (535), Expect = 5e-61
Identities = 148/478 (30%), Positives = 236/478 (49%), Gaps = 23/478 (4%)
Query: 34 INGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I G +V SS V NPA E ++ VP E+ + A+ +AK+AF W T R
Sbjct: 118 IGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQR 177
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
V+ ++ + + N LA +T E GK +S G++ V+ A GE +P+
Sbjct: 178 VMLKFQELIRKNMDKLAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNV 237
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP-ALAAGCTCVIKPAEDTPLTALALA 210
+ +REPLGV I P+NFP AMI + P A+ G T ++KP+E P ++ LA
Sbjct: 238 SNGVDTYSIREPLGVCAGICPFNFP-AMIPLWMFPVAVTCGNTFILKPSEKDPGASVILA 296
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270
LA EA +P GVLN+V + N++ C + +SF GS G +Y+ + K
Sbjct: 297 ELAMEAGLPDGVLNIVHGTNDTVNAI----CDDEDIRAVSFVGSNTAGMHIYARAAAKGK 352
Query: 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI---QEQVFDQFVE 327
R+ +G +V +AN+ ++ +AA F GQ C+A + + + D+ VE
Sbjct: 353 RIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVE 412
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
K ++ +LGP+I+ E++ ++Q + GAK++L G + G
Sbjct: 413 RAKA------LKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPG 466
Query: 388 ---SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
F PTIL+ +TPDM CY EE+FGPV VC++ + +E++ + N + G FT+
Sbjct: 467 YEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTS 526
Query: 445 DISQAWRVGKKLQVGMVGINEGI-ISHTEAAFGGVKESGLGREG--SRHGMEEFTQIK 499
+ A + ++ G +GIN I + +F G K S G + G++ FTQIK
Sbjct: 527 SGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIK 584
|
Length = 604 |
| >gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 203 bits (517), Expect = 2e-59
Identities = 138/462 (29%), Positives = 225/462 (48%), Gaps = 26/462 (5%)
Query: 32 AYINGEWV----HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+I+G+W S NPA E L V+ A+ +A+ AF W++ + +
Sbjct: 1 LFIDGKWRAGQGESFSST---NPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLE 57
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER V++R+ LE K+ALA ++ +E+GKP E+ EV V S +A
Sbjct: 58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETRTEVASMIGKVA-ISIKAYHERTGE 116
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P+ ++ P GVV + P+NFP + + PAL AG T V KP+E TP A
Sbjct: 117 SENPMPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAE 176
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS- 266
L +A +P GVLN+V +R G L P + G+ FTGS+ G +L+ +
Sbjct: 177 ETVKLWEKAGLPAGVLNLVQGAR----ETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAG 232
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF-DQF 325
+ K L+LE+GGN P IV A++ AV + + F + GQ C A R L+ + D F
Sbjct: 233 RPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAF 292
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
+ L VE+ + G + +G +I+L +++ + ++ G K +L +
Sbjct: 293 LARL-VEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLL-AMRQLD 350
Query: 386 LGSKFFAPTIL--TNI--TPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G+ P I+ T + PD EE FGP+ I++ +E++ +ANN+ GL+
Sbjct: 351 PGAALLTPGIIDVTGVAELPD-----EEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGL 405
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESG 482
++D R +++ G+V N+ + + AA FGG+ SG
Sbjct: 406 LSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASG 447
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484 |
| >gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Score = 200 bits (511), Expect = 3e-58
Identities = 123/423 (29%), Positives = 203/423 (47%), Gaps = 28/423 (6%)
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES--------LGEVVYANSFVDWFSE 138
+ R L+ L+ LE NKQ +E + ++ G+ P E+ + E+ + +D + +
Sbjct: 29 EFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLK 88
Query: 139 EARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKP 198
+ V P KS ++ EPLGVV +I WN+P+ + +A A+AAG T V+KP
Sbjct: 89 P-EKVDTVGVFGPGKSY---IIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKP 144
Query: 199 AEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258
+E +P T+ +A L + + + V+ I FTGS +VG
Sbjct: 145 SELSPHTSKLMAKLLTK-YLDPSYVRVIEGGVEVTTE-----LLKEPFDHIFFTGSPRVG 198
Query: 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
K++ ++ + +LELGG +P IV + NL+ A KF N GQ CVA + L+
Sbjct: 199 KLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVH 258
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
+ D+F+E LK I + F G+ K + ++N +++ +++D G KV+
Sbjct: 259 RSIKDKFIEALKEAIKEFF--GEDPKKSED-YSRIVNEFHTKRLAELIKD---HGGKVVY 312
Query: 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA 438
GG+V +K+ APTI+ N D EE+FGP+ + ++ +E L N+ LA
Sbjct: 313 -GGEVDI-ENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLA 370
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLGREGSRHGMEEFT 496
Y+F D V + G V IN+ + FGGV SG+G ++G + F+
Sbjct: 371 LYYFGEDKRHKELVLENTSSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFS 430
Query: 497 QIK 499
K
Sbjct: 431 HPK 433
|
Length = 493 |
| >gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Score = 200 bits (509), Expect = 5e-58
Identities = 142/475 (29%), Positives = 228/475 (48%), Gaps = 14/475 (2%)
Query: 19 KYLQKLCLSTYTQ-AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA 77
++L ++ LS+ Y+ GEW + NPAN++ +A+V + +ED + + + +EA
Sbjct: 9 EFLSEIGLSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEA 68
Query: 78 FEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFS 137
+ W Q +RG ++++ L L +++ E GK E +GEV D+
Sbjct: 69 AKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAV 128
Query: 138 EEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIK 197
+R+ G ++PS + ++ V PLG+VG+IT +NFP A++ AL G V K
Sbjct: 129 GLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWK 188
Query: 198 PAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257
A TPL +A+ L E + + +S +G+ + + +SFTGS++V
Sbjct: 189 GAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKV 248
Query: 258 GKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI 317
G ++ + + LEL GN IV +A++Q AV + A GQ C R L+
Sbjct: 249 GLMVQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLL 308
Query: 318 QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVI 377
E ++D +E L + + K GD + LGPL + + ++ S+G K I
Sbjct: 309 HESIYDDVLEQL-LTVYKQVKIGDPLEKGTL-LGPLHTPESKKNFEKGIEIIKSQGGK-I 365
Query: 378 LGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL 437
L GG + F PTI+ I+PD EE+FGPV +KFKT EE++ + N+ GL
Sbjct: 366 LTGGSAIESEGNFVQPTIV-EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGL 424
Query: 438 AGYFFTN--DISQAWRVGKKLQVGMVGINEGIISHTEA----AFGGVKESGLGRE 486
+ FT + W G+V +N I A AFGG K +G GRE
Sbjct: 425 SSSIFTRNPETIFKWIGPLGSDCGIVNVN---IPTNGAEIGGAFGGEKATGGGRE 476
|
Length = 508 |
| >gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 6e-58
Identities = 127/430 (29%), Positives = 209/430 (48%), Gaps = 32/430 (7%)
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQE-SGKPPTES-LGEVV-------YANSFVD- 134
+ +ER L R L N+ ALAE ++ + + E+ L E++ +A +
Sbjct: 18 SLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKK 77
Query: 135 WFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTC 194
W R L+ P K++ + +PLGVVG+I PWN+P+ + + ALAAG
Sbjct: 78 WMKPSRRHV--GLLFLPAKAE---VEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRV 132
Query: 195 VIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSP--HVAGISFT 252
+IKP+E TP T+ LA L E + + VVT V + P H + FT
Sbjct: 133 MIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTGGAD----VAAAFSSLPFDH---LLFT 184
Query: 253 GSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312
GST VG+ + ++ + ++LELGG +P I+ +A+L KA K N GQ CVA
Sbjct: 185 GSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAP 244
Query: 313 NRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372
+ L+ E ++FV K + K + + + +IN ++ +++DA +K
Sbjct: 245 DYVLVPEDKLEEFVAAAKAAVAKMYPTLADNP----DYTSIINERHYARLQGLLEDARAK 300
Query: 373 GAKVI-LGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVAN 431
GA+VI L ++ PT++ N+T DM EE+FGP+ + + + +E++ N
Sbjct: 301 GARVIELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYIN 360
Query: 432 NSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGI--ISHTEAAFGGVKESGLGREGSR 489
LA Y+F D ++ RV ++ G V IN+ + ++ + FGGV SG+G +
Sbjct: 361 ARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLLHVAQDDLPFGGVGASGMGAYHGK 420
Query: 490 HGMEEFTQIK 499
G F+ K
Sbjct: 421 EGFLTFSHAK 430
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434 |
| >gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 197 bits (502), Expect = 4e-57
Identities = 144/467 (30%), Positives = 233/467 (49%), Gaps = 38/467 (8%)
Query: 33 YINGEWVH-SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
+ING+W+ + F NP + E L D V A+ +A+ AF W++ + +ER
Sbjct: 4 WINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQA 63
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA--RRTYGELVP 149
+++R+ LE NK+ LAE++ +E+GKP E+ EV + + S +A RT GE
Sbjct: 64 IVERFAALLEENKEELAEVIARETGKPLWEAATEVTAMINKIA-ISIQAYHERT-GE--- 118
Query: 150 SPVKSKELL----MVR-EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
K E+ ++R P GVV + P+NFP + + PAL AG T V KP+E TP
Sbjct: 119 ---KRSEMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPW 175
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
A L +A +P GVLN+V R GK L P + G+ FTGS G +L+
Sbjct: 176 VAELTVKLWQQAGLPAGVLNLVQGGRET----GKALAAHPDIDGLLFTGSANTGYLLHRQ 231
Query: 265 -CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF- 322
Q K L+LE+GGN P ++ A++ AV + + F + GQ C A R L+ +
Sbjct: 232 FAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQG 291
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D F+ L V + K G + +G +I+ + + + ++ G K +L +
Sbjct: 292 DAFLARL-VAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLL---E 347
Query: 383 VTKL--GSKFFAPTIL--TNIT--PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436
+T+L G+ P I+ T + PD EE FGP+ +++ +E++ +ANN+ G
Sbjct: 348 MTQLQAGTGLLTPGIIDVTGVAELPD-----EEYFGPLLQVVRYDDFDEAIRLANNTRFG 402
Query: 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESG 482
L+ ++D + +++ G+V N+ + + AA FGGV SG
Sbjct: 403 LSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASG 449
|
Length = 487 |
| >gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Score = 195 bits (498), Expect = 7e-57
Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 45/419 (10%)
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTES--------LGEVVYANSFVD-WFSEEARRT 143
LK+ + ++ + + E + ++ GK E+ L E+ YA + W + +T
Sbjct: 26 LKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKT 85
Query: 144 YGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP---ALAAGCTCVIKPAE 200
PS KS + EP GVV +I PWN+P + +AP A+AAG T V+KP+E
Sbjct: 86 PLLNFPS--KSY---IYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLKPSE 137
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
TP T+ +A + E + + VV +LL I FTGS +VGKI
Sbjct: 138 LTPNTSKVIAKIIEET-FDEEYVAVVEGGVEENQ---ELL--DQKFDYIFFTGSVRVGKI 191
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ ++ + ++LELGG +P IV +ANL+ A + KF N GQ CVA + L+ E
Sbjct: 192 VMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHES 251
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
V ++F++ LK EI K + G+ + G +IN +++ ++ + K++ GG
Sbjct: 252 VKEKFIKELKEEIKKFY--GEDPLESP-DYGRIINEKHFDRLAGLLDN-----GKIVFGG 303
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
T + + PTIL N+T D EE+FGP+ + + T +E++ + + LA Y
Sbjct: 304 N--TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALY 361
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGII----SHTEAAFGGVKESGLGREGSRHGMEEF 495
F+ D +V + L G IN+ I+ + FGGV SG+ GS HG F
Sbjct: 362 LFSEDKKVEKKVLENLSFGGGCINDTIMHLANPYL--PFGGVGNSGM---GSYHGKYSF 415
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449 |
| >gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Score = 188 bits (480), Expect = 6e-54
Identities = 134/479 (27%), Positives = 214/479 (44%), Gaps = 32/479 (6%)
Query: 34 INGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
I + + PV NPA+ + + V + VQ AI SA++AF W+ T KER
Sbjct: 42 IGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTWNATPAKERAAK 101
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L R LE + L + +E+GK ++ EV A F +++++ R GE
Sbjct: 102 LDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------ 155
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212
E GV I+PWNFP+A+ T +++ ALAAG T + KPAE T L A L
Sbjct: 156 ------FSVESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVEL 209
Query: 213 AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK-- 270
EA P G + ++ VG L + P +AG++FTGST+V +++ +Q
Sbjct: 210 MQEAGFPAGTIQLLPGR---GADVGAALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAP 266
Query: 271 -RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
L E GG IV S A ++ V + + F + GQ C A +QE V D+ + M+
Sbjct: 267 VPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMI 326
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV--ILGGGKVTKLG 387
+ + + ++ ++GP+I+ + + + ++ K+ +
Sbjct: 327 QGAMQE--LKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQH 384
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA---GYFFTN 444
F APT+ L +EEVFGPV +++K E V + TG G
Sbjct: 385 GTFVAPTLFELDDIAEL--SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRI 442
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLG-REGSRHGMEEFTQIKY 500
+ + W + K +VG +N + FGG SG G + G H + TQ++Y
Sbjct: 443 ETTYRW-IEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500 |
| >gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 193 bits (493), Expect = 3e-53
Identities = 148/464 (31%), Positives = 229/464 (49%), Gaps = 61/464 (13%)
Query: 46 PVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
PV NPA+ D+ + V + EDV+ A+ +A+ AF +WS T ER +L+R +E +
Sbjct: 570 PVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHM 629
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL 164
L + +E+GK ++ EV A F+ +++ +ARR L +PL
Sbjct: 630 PELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRL---LNGPG---------HKPL 677
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224
G V I+PWNFP+A+ T ++A AL AG T + KPAE TPL A L HEA +PK L
Sbjct: 678 GPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQ 737
Query: 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI----LYSHCSQGIKRLSLELGG-N 279
++ +VG L P +AG+ FTGST+V ++ L + L E GG N
Sbjct: 738 LLPGD---GRTVGAALVADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVP-LIAETGGQN 793
Query: 280 APFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL-IQEQVFDQFVEMLK---VEITK 335
A IV S+A ++ V+ +A+ F + GQ C +A R L +QE V D+ + MLK E+
Sbjct: 794 A-MIVDSSALPEQVVADVIASAFDSAGQRC-SALRVLCLQEDVADRVLTMLKGAMDELR- 850
Query: 336 SFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVI-LGGGKVTKLGSKFFAPT 394
GD + ++GP+I+ +++ ++ + G V L T+ G+ F APT
Sbjct: 851 ---IGDPWRLS-TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGT-FVAPT 905
Query: 395 I--LTNITPDMLCYTEEVFGPVAVCIKFKTEE-ESLCVANNSNTGLAGYFFTNDI----- 446
+ + +I D+ EVFGPV ++FK +E + + N+ GY T +
Sbjct: 906 LIEIDSI-SDL---EREVFGPVLHVVRFKADELDRVIDDINA----TGYGLTFGLHSRID 957
Query: 447 SQAWRVGKKLQVGMVGINEGIISHTEAA------FGGVKESGLG 484
V +++ G + +N II A FGG SG G
Sbjct: 958 ETIAHVTSRIRAGNIYVNRNII----GAVVGVQPFGGEGLSGTG 997
|
Length = 1208 |
| >gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 186 bits (475), Expect = 1e-51
Identities = 143/470 (30%), Positives = 224/470 (47%), Gaps = 49/470 (10%)
Query: 34 INGEWVHSSKKFPVYNPANDEHL-ADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
+NG V + PV NPA+ + + V + DV+ A+ +A A WS T P ER +
Sbjct: 118 VNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPIWSATPPAERAAI 177
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L+R +E L ++ +E+GK + ++ EV A F+ +++ +AR T+G L
Sbjct: 178 LERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGNLT---- 233
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212
PLG V I+PWNFP+A+ T ++A ALAAG + + KPAE TPL A L
Sbjct: 234 --------HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRL 285
Query: 213 AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS--QG-I 269
HEA +P GVL ++ +VG L VAG+ FTGST+V +++ + QG
Sbjct: 286 LHEAGVPPGVLQLLPG---RGETVGAALTADARVAGVMFTGSTEVARLIQRQLAKRQGRP 342
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
L E GG IV S+A ++ V+ +A+ F + GQ C A +QE V D+ + ML
Sbjct: 343 IPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVADRILTML 402
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG-- 387
K + + + G+ + ++GP+I+ E +I + + +K G V +
Sbjct: 403 KGAMAELRV-GNPDRL-TTDVGPVID---AEAKANIEKHIQTMRSK----GRLVHQAAAP 453
Query: 388 -----SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE-ESLCVANNSNTGLAGYF 441
F APT++ D L EVFGPV +++K +E + + N+ GY
Sbjct: 454 NSLQKGTFVAPTLIELENLDEL--QREVFGPVLHVVRYKRDELDEVIDQINAT----GYG 507
Query: 442 FTNDI-----SQAWRVGKKLQVGMVGINEGIISHTEA--AFGGVKESGLG 484
T + V ++ G + +N I+ FGG SG G
Sbjct: 508 LTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGTG 557
|
Length = 769 |
| >gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 181 bits (463), Expect = 3e-49
Identities = 149/457 (32%), Positives = 226/457 (49%), Gaps = 68/457 (14%)
Query: 46 PVYNPANDEH-LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104
PV +PA+ + +V E V+ A+ +A+ AF WS+T +ER +L+R LE N+
Sbjct: 565 PVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPAWSRTPVEERAAILERAADLLEANR 624
Query: 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG--ELVPSPV-KSKELLMVR 161
L + +E+GK +++ EV A F +++ +ARR +G E +P P +S EL
Sbjct: 625 AELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNEL--RL 682
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKG 221
GV I+PWNFP+A+ +VA ALAAG T + KPAE TPL A L HEA IPK
Sbjct: 683 HGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKD 742
Query: 222 VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKR---------- 271
VL ++ +VG L P +AG++FTGST+ +I I R
Sbjct: 743 VLQLLPGD---GATVGAALTADPRIAGVAFTGSTETARI--------INRTLAARDGPIV 791
Query: 272 -LSLELGG-NAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
L E GG NA IV S A ++ V + + FR+ GQ C A +QE + D+ +EML
Sbjct: 792 PLIAETGGQNA-MIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRVIEML 850
Query: 330 K---VEITKSFIQGDTS--KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVI----LGG 380
K E+ GD D +GP+I+ +D+ + + + + A+++ L
Sbjct: 851 KGAMAELK----VGDPRLLSTD---VGPVIDAEAKANLDAHI-ERMKREARLLAQLPLPA 902
Query: 381 GKVTKLGSKFFAPTI--LTNITPDMLCYTEEVFGPVAVCIKFKTEE-ESLCVANNSNTGL 437
G T+ G F APT + +I L EVFGP+ I++K + + + A N+
Sbjct: 903 G--TENGH-FVAPTAFEIDSI--SQL--EREVFGPILHVIRYKASDLDKVIDAINA---- 951
Query: 438 AGYFFT------NDISQAWRVGKKLQVGMVGINEGII 468
GY T + A R+ +++VG V +N I
Sbjct: 952 TGYGLTLGIHSRIE-ETADRIADRVRVGNVYVNRNQI 987
|
Length = 1038 |
| >gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Score = 171 bits (436), Expect = 6e-48
Identities = 133/449 (29%), Positives = 216/449 (48%), Gaps = 48/449 (10%)
Query: 70 AIMSAKEAFEQWSQTTPKE-RGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGEVV 127
A+ A+EAF +T P E R L+ L+ LE N+ + E + ++ KP E+ L E++
Sbjct: 3 AVRRAREAFSS-GKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEIL 61
Query: 128 YANSFVDWFSEEARRTYGEL----VPSPVK------SKELLMVREPLGVVGLITPWNFPM 177
E + L P PVK ++ + +EPLGVV +I WN+P+
Sbjct: 62 LVK-------NEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPL 114
Query: 178 AMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN----VVTSSRTNA 233
+ + A+AAG VIKP+E +P TA LA L IPK + VV
Sbjct: 115 QLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAEL-----IPKYLDKECYPVVLGG---V 166
Query: 234 NSVGKLL-CTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292
+LL + I +TGST VGKI+ ++ + ++LELGG +P V + ++
Sbjct: 167 EETTELLKQRFDY---IFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDV 223
Query: 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352
A KF N GQ C+A + L +V ++FVE LK + K F D ++ + G
Sbjct: 224 AARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVEALK-KTLKEFYGEDPKESP--DYGR 280
Query: 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFG 412
+IN ++ ++ +S G KV +GG T ++ APT+LT++ P EE+FG
Sbjct: 281 IINDRHFQR----LKKLLSGG-KVAIGGQ--TDEKERYIAPTVLTDVKPSDPVMQEEIFG 333
Query: 413 PVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTE 472
P+ + +E++ N+ LA Y F+N+ ++ G V +N+ I+ +T
Sbjct: 334 PILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIMHYTL 393
Query: 473 AA--FGGVKESGLGREGSRHGMEEFTQIK 499
+ FGGV SG+G ++ + F+ +
Sbjct: 394 DSLPFGGVGNSGMGAYHGKYSFDTFSHKR 422
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443 |
| >gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Score = 169 bits (430), Expect = 2e-47
Identities = 131/448 (29%), Positives = 209/448 (46%), Gaps = 36/448 (8%)
Query: 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES- 122
V +++ S + +W ++ LK L+ ++ N+ + + Q+ GKP ES
Sbjct: 5 VRELRETFRSGRTRSAEWRKSQ-------LKGLLRLVDENEDDIFAALRQDLGKPSAESF 57
Query: 123 LGEV--------VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWN 174
EV + W + E +T L P K++ +V EPLGVV +I+ WN
Sbjct: 58 RDEVSVLVSSCKLAIKELKKWMAPEKVKT--PLTTFPAKAE---IVSEPLGVVLVISAWN 112
Query: 175 FPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNAN 234
FP + V A+AAG V+KP+E P T+ LA L E K + V+
Sbjct: 113 FPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEYLDTKAI-KVIEGGVPETT 171
Query: 235 SVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAV 294
+ LL I FTGS +VG+I+ + ++ + ++LELGG P IV S +L+ AV
Sbjct: 172 A---LL--EQKWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAV 226
Query: 295 SGAMAAKFRNC-GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPL 353
K+ GQAC+A + L++E ++ LK + K F G+ K K L +
Sbjct: 227 RRIAGGKWGCNNGQACIAPDYVLVEESFAPTLIDALKNTLEKFF--GENPKESKD-LSRI 283
Query: 354 INLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGP 413
+N +++ ++ D S K++ GG + K + + PTIL + D TEE+FGP
Sbjct: 284 VNSHHFQRLSRLLDDP-SVADKIVHGGERDEK--NLYIEPTILLDPPLDSSIMTEEIFGP 340
Query: 414 VAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHT-- 471
+ I K EES+ + N+ LA Y FT + R+ + G V N+ ++ +
Sbjct: 341 LLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVVQYAID 400
Query: 472 EAAFGGVKESGLGREGSRHGMEEFTQIK 499
FGGV ESG G + + F+ K
Sbjct: 401 TLPFGGVGESGFGAYHGKFSFDAFSHKK 428
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432 |
| >gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Score = 171 bits (435), Expect = 1e-45
Identities = 116/407 (28%), Positives = 187/407 (45%), Gaps = 66/407 (16%)
Query: 46 PVYNPANDEHLAD----VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELE 101
PV NPA+ D V + +V+ A+ SA A W T P ER +L+R +E
Sbjct: 662 PVINPAD---PRDIVGYVREATPAEVEQALESAVNAAPIWFATPPAERAAILERAADLME 718
Query: 102 GNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161
Q L ++ +E+GK + ++ EV A F+ +++ + R + +
Sbjct: 719 AQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDF---------DND---TH 766
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKG 221
PLG V I+PWNFP+A+ T +VA ALAAG + + KPAE TPL A + EA +P G
Sbjct: 767 RPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAG 826
Query: 222 VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLS-------- 273
V+ ++ +VG L V G+ FTGST+V ++L + + RL
Sbjct: 827 VVQLLPGR---GETVGAALVADARVRGVMFTGSTEVARLLQRNLA---GRLDPQGRPIPL 880
Query: 274 -LELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE 332
E GG IV S+A ++ V+ +A+ F + GQ C A +Q+ V D+ ++ML+
Sbjct: 881 IAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRTLKMLRGA 940
Query: 333 ITKSFIQGDTSKNDKCNL----------GPLINLAQVEKVDSIVQDAISKGAKV---ILG 379
+ +C + GP+I+ ++ +Q +KG V
Sbjct: 941 M------------AECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARE 988
Query: 380 GGKVTKLGSKFFAPTI--LTNITPDMLCYTEEVFGPVAVCIKFKTEE 424
+ + G+ F PT+ L + D L EVFGPV +++ +
Sbjct: 989 NSEDWQSGT-FVPPTLIELDSF--DEL--KREVFGPVLHVVRYNRNQ 1030
|
Length = 1318 |
| >gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 4e-43
Identities = 134/449 (29%), Positives = 222/449 (49%), Gaps = 50/449 (11%)
Query: 75 KEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES----LG----EV 126
+E +E + + R LK L+ L+ N++A+ + + Q+ GK E+ +G
Sbjct: 16 RETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSA 75
Query: 127 VYANSFVD-WFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185
A S + W + + + LV P ++ +V EPLGVV + + WNFP+ + +
Sbjct: 76 NLALSNLKKWMAPK--KAKLPLVAFPATAE---VVPEPLGVVLIFSSWNFPIGLSLEPLI 130
Query: 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPH 245
A+AAG V+KP+E P T+ LA A IPK + ++ +V K++ P
Sbjct: 131 GAIAAGNAVVLKPSELAPATSAFLA-----ANIPKYL---------DSKAV-KVIEGGPA 175
Query: 246 VA---------GISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV---YSNANLQKA 293
V I FTGS +VG+I+ + ++ + ++LELGG P IV S+ + + A
Sbjct: 176 VGEQLLQHKWDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVA 235
Query: 294 VSGAMAAKFRNC-GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352
V+ + K+ +C GQAC+A + L++E+ +E+LK I K F G+ + K +
Sbjct: 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKKFF--GENPRESKS-MAR 292
Query: 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFG 412
++N +++ ++++D A ++ GG K F PTIL N D TEE+FG
Sbjct: 293 ILNKKHFQRLSNLLKDP-RVAASIVHGGSIDEK--KLFIEPTILLNPPLDSDIMTEEIFG 349
Query: 413 PVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTE 472
P+ I K E+S+ N+ LA Y FTN+ R+ + G V N+ II +
Sbjct: 350 PLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAIIQYAC 409
Query: 473 AA--FGGVKESGLGREGSRHGMEEFTQIK 499
+ FGGV ESG GR ++ + F+ K
Sbjct: 410 DSLPFGGVGESGFGRYHGKYSFDTFSHEK 438
|
Length = 484 |
| >gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 3e-35
Identities = 124/488 (25%), Positives = 205/488 (42%), Gaps = 31/488 (6%)
Query: 34 INGEWVHSS-KKFPVYNPANDEH-LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
I GE V +S ++ +P N + LA + E A+ +A +A ++WS +R
Sbjct: 36 IGGEEVWTSGERIYQVSPHNHQAVLAKATNATEELANKAVEAALDAKKEWSLLPFYDRAA 95
Query: 92 VLKRWLKELEG--NKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+ + L G + LA M +S + V F + ++ AR Y + P
Sbjct: 96 IFLKAADLLSGPYRAEILAATMLGQSKTVYQAEIDAVAELIDFFRFNAKYARELYEQQ-P 154
Query: 150 SPVKSKELLMVREPL-GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
+ PL G V I+P+NF APAL G T + KP++ L+
Sbjct: 155 ISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPALM-GNTVIWKPSDTAMLSNYL 213
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
+ + EA +P GV+N V + V + P +AGI FTGST K L+ +Q
Sbjct: 214 VMRILEEAGLPPGVINFVPG---DGPLVSDTVLADPDLAGIHFTGSTPTFKHLWKQVAQN 270
Query: 269 IK------RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ R+ E GG +V+ +A+++ VSG + F GQ C A +R + ++
Sbjct: 271 LDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKCSACSRLYVPHSLW 330
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV-ILGGG 381
+F L GD + +G +I+ K+ ++ A S + + IL GG
Sbjct: 331 PRFKGRLL-AELSRVKVGDPD-DFGTFMGAVIDEKSFAKIVKYIEHAKSDPSALTILAGG 388
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPV-AVCIKFKTEEESLC--VANNSNTGLA 438
K F PT++ + P EE+FGPV V + + + + V + ++ GL
Sbjct: 389 KYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILDLVDSTTSYGLT 448
Query: 439 GYFFTNDISQAWRVGKKLQ--VGMVGINE----GIISHTEAAFGGVKESGLG-REGSRHG 491
G F D K L+ G IN+ ++ + FGG + SG + G H
Sbjct: 449 GAVFAKDRDAILEADKVLRFAAGNFYINDKPTGAVVG--QQPFGGARASGTNDKAGGPHN 506
Query: 492 MEEFTQIK 499
+ +T +
Sbjct: 507 LLRWTSPR 514
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532 |
| >gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 51/107 (47%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Query: 394 TILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVG 453
T+L ++ PDM EE+FGPV I+FK EEE++ +AN++ GL FT D+++A RV
Sbjct: 257 TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVA 316
Query: 454 KKLQVGMVGINEG-IISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
++L+ G V IN+ I EA FGGVK SG+GREG +G+EE+T+ K
Sbjct: 317 ERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGREGGPYGLEEYTRTK 363
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367 |
| >gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Score = 135 bits (340), Expect = 2e-34
Identities = 100/377 (26%), Positives = 185/377 (49%), Gaps = 22/377 (5%)
Query: 134 DWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCT 193
+W + E +T P+ + +V EPLGVV +I+ WN+P + V A++AG
Sbjct: 88 NWMAPEKAKTSLTTFPASAE-----IVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNA 142
Query: 194 CVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTG 253
V+KP+E P ++ LA L E + + VV + T ++ I +TG
Sbjct: 143 VVLKPSELAPASSALLAKLL-EQYLDSSAVRVVEGAVTETTAL-----LEQKWDKIFYTG 196
Query: 254 STQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFR-NCGQACVAA 312
S+++G+++ + ++ + + LELGG +P +V S+ +L+ V +A K+ N GQAC++
Sbjct: 197 SSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISP 256
Query: 313 NRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372
+ L ++ + ++ +K E+ + + D + ++N +++ ++ D
Sbjct: 257 DYILTTKEYAPKVIDAMKKELETFYGKNPMESKD---MSRIVNSTHFDRLSKLL-DEKEV 312
Query: 373 GAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432
K++ GG K + + APTIL ++ D L +EE+FGP+ + EES V +
Sbjct: 313 SDKIVYGGEKDRE--NLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRS 370
Query: 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS---HTEAAFGGVKESGLGREGSR 489
LA Y FT++ R + G + +N+ + HT FGGV ESG+G +
Sbjct: 371 RPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAVHLALHT-LPFGGVGESGMGAYHGK 429
Query: 490 HGMEEFTQIKYMCFGNL 506
+ F+ K + + +L
Sbjct: 430 FSFDAFSHKKAVLYRSL 446
|
Length = 484 |
| >gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-28
Identities = 119/474 (25%), Positives = 180/474 (37%), Gaps = 101/474 (21%)
Query: 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGV---EDVQYAIMSAKEAFEQWSQTTP 86
Q+Y+ G+W + +++ E +A V G+ V YA A T
Sbjct: 2 QSYVAGQWHAGTGDGRTLHDAVTGEVVARVSSEGLDFAAAVAYAREKGGPALRAL---TF 58
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVD---------WFS 137
ER +LK K L K+ L + +S++D ++
Sbjct: 59 HERAAMLKALAKYLMERKEDLYALSAATGA----------TRRDSWIDIDGGIGTLFAYA 108
Query: 138 EEARRTYGELVPSPVK--------SKE-------LLMVREPLGVVGLITPWNFPMAMITR 182
RR EL + SK+ +L R GV I +NFP+ +
Sbjct: 109 SLGRR---ELPNAHFLVEGDVEPLSKDGTFVGQHILTPRR--GVAVHINAFNFPVWGMLE 163
Query: 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTNANSVGKLLC 241
K APAL AG ++KPA T A+ E+ + P+G L ++ SVG LL
Sbjct: 164 KFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLI------CGSVGDLL- 216
Query: 242 TSPHVAG---ISFTGSTQVGKILYSH---CSQGIKRLSLE--------LGGNAP------ 281
H+ ++FTGS L +H ++ I R + E LG +A
Sbjct: 217 --DHLGEQDVVAFTGSAATAAKLRAHPNIVARSI-RFNAEADSLNAAILGPDATPGTPEF 273
Query: 282 --FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ 339
F+ K V+ M K GQ C A R + E D +E LK + K +
Sbjct: 274 DLFV--------KEVAREMTVK---AGQKCTAIRRAFVPEARVDAVIEALKARLAKVVV- 321
Query: 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK------VTKLGSKFFAP 393
GD + +GPL++ Q E V + V + A+V+ GG FF P
Sbjct: 322 GDPR-LEGVRMGPLVSREQREDVRAAV-ATLLAEAEVVFGGPDRFEVVGADAEKGAFFPP 379
Query: 394 TILTNITPDM--LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
T+L PD + E FGPVA + + + E++ +A L TND
Sbjct: 380 TLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTND 433
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513 |
| >gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 6e-28
Identities = 125/478 (26%), Positives = 200/478 (41%), Gaps = 43/478 (8%)
Query: 32 AYINGEWVHSSKKFPVYNPANDEH-LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
I G+ V + P + H LA V+ AI +A EA ++W++ ++R
Sbjct: 35 LVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRA 94
Query: 91 IVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVVYANSFVDWF---SEEARRTYG 145
+ + L G + A M + GK ++ E+ A +D+ + A Y
Sbjct: 95 AIFLKAADLLSGKYRYELNAATMLGQ-GKNVWQA--EIDAACELIDFLRFNVKYAEELYA 151
Query: 146 ELVPSPVKSKELLMVREPL-GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
+ S + PL G V ++P+NF APAL G + KP++ L
Sbjct: 152 QQPLSSPAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAVL 210
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
+ + + EA +P GV+N V VG + SPH+AG+ FTGST K L+
Sbjct: 211 SNYLVYKILEEAGLPPGVINFVPGD---GPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQ 267
Query: 265 CSQGIK------RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
+ + R+ E GG +V+ +A++ V+ + F GQ C AA+R +
Sbjct: 268 IGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVP 327
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCN-LGPLINLAQVEKVDSIVQDAISKGAKVI 377
E ++ + E L +E K GD D N +G +I+ +++ + A S I
Sbjct: 328 ESLWPEVKERL-LEELKEIKMGDPD--DFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEI 384
Query: 378 LGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSNT 435
+ GGK F PT++ P TEE+FGPV + EE+L + + ++
Sbjct: 385 IAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSP 444
Query: 436 -GLAGYFFTND---ISQAWRVGKKLQ--VGMVGINEGIISHTEAA-----FGGVKESG 482
L G F D I +A L+ G IN+ T A FGG + SG
Sbjct: 445 YALTGAIFAQDRKAIREA---TDALRNAAGNFYIND---KPTGAVVGQQPFGGARASG 496
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522 |
| >gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Score = 108 bits (270), Expect = 2e-25
Identities = 76/389 (19%), Positives = 140/389 (35%), Gaps = 52/389 (13%)
Query: 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE- 125
+ A+++A + + + +R L R ++ L +A +GK
Sbjct: 1 PERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKG-WMFAENI 59
Query: 126 ------------VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPW 173
V+Y+ ++ R P G V +I +
Sbjct: 60 CGDQVQLRARAFVIYSYRIPHEPGNH---------LGQGLKQQSHGYRWPYGPVLVIGAF 110
Query: 174 NFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTN 232
NFP+ + ++A ALA G ++KP + + L H A + P + ++
Sbjct: 111 NFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKT 170
Query: 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292
+ L P+ + FTGS++V + L Q R+ LEL G ++ +A
Sbjct: 171 MQA----LLLHPNPKMVLFTGSSRVAEKLALDAKQA--RIYLELAGFNWKVLGPDAQAVD 224
Query: 293 AVSGAMAAK-FRNCGQACVAANRFLIQEQVFDQ-FVEMLKVEITKSFIQGDTSKNDKCNL 350
V+ GQ C A + + E VE LK + + ++ L
Sbjct: 225 YVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLEDLL-------L 277
Query: 351 GPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKF------FAPTILTNITPDM- 403
GP+ Q +++ + V+L GK K S A + I +
Sbjct: 278 GPV----QTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVPIDEILK 333
Query: 404 --LCYTEEVFGPVAVCIKFKTEEESLCVA 430
TEE+FGP A+ +++K ++ +L +
Sbjct: 334 TYELVTEEIFGPFAIVVEYKKDQLALVLE 362
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442 |
| >gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 6e-24
Identities = 114/445 (25%), Positives = 180/445 (40%), Gaps = 51/445 (11%)
Query: 31 QAYINGEWVH-SSKKFPVYNPANDEHLADVPDMGV---EDVQYAIMSAKEAFEQWSQTTP 86
Q+Y++GEW + PV + + E LA V G+ V +A A T
Sbjct: 2 QSYLSGEWRTGQGEGVPVRDASTGEVLARVTSEGLDVAAAVAWAREVGGPALRA---LTF 58
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR---- 142
ER +LK + L K+AL + +G ++ ++ + +S RR
Sbjct: 59 HERARMLKALAQYLSERKEALYALAAT-TGATRRDNWVDIDGGIGTLFTYSSLGRRELPD 117
Query: 143 ----TYGELVPSPVKSKELLMVREPL-----GVVGLITPWNFPMAMITRKVAPALAAGCT 193
E P SK+ + GV I +NFP+ + K APA AG
Sbjct: 118 ANLIPEDEFEPL---SKDGSFQGRHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVP 174
Query: 194 CVIKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFT 252
+ KPA T A AL E+ + P+G L ++ S G LL H ++FT
Sbjct: 175 TLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICG------SAGDLLDHLDHRDVVAFT 228
Query: 253 GSTQVGKILYSH---CSQGIKRLSLE--------LGGNAPFIVYSNANLQKAVSGAMAAK 301
GS L +H +GI R + E LG +A + + + K
Sbjct: 229 GSAATADRLRAHPNVLERGI-RFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIK 287
Query: 302 FRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361
GQ C A R ++ + + + ++ L+ + K + GD + + ++GPL++L Q
Sbjct: 288 ---AGQKCTAIRRVIVPKALLEAVLKALQARLAK-VVLGD-PREEGVDMGPLVSLEQRAD 342
Query: 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM-LCYTEEVFGPVAVCIKF 420
V++ V ++ GA+V LGG L FF PT+L P + E FGPVA +
Sbjct: 343 VEAAVAALLAAGAEVRLGGPGR--LDGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPY 400
Query: 421 KTEEESLCVANNSNTGLAGYFFTND 445
E+ +A L T+D
Sbjct: 401 GDRAEAARLAARGGGSLVATLATSD 425
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663 |
| >gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 1e-23
Identities = 95/397 (23%), Positives = 143/397 (36%), Gaps = 71/397 (17%)
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE-------- 125
A AFE + +P R L+ E+E L E+G P GE
Sbjct: 8 AAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQL 67
Query: 126 -----VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180
+V S++D + A + +P P +L + PLG V + NFP+A
Sbjct: 68 RLFADLVREGSWLDARIDPADPD-RQPLPRP----DLRRMLVPLGPVAVFGASNFPLAFS 122
Query: 181 TR--KVAPALAAGCTCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNAN 234
A ALAAGC V+K P T+ +A A +P GV +++
Sbjct: 123 VAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGG---R 179
Query: 235 SVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLS-----LELGGNAPFIVYSNAN 289
VG L P + + FTGS + G+ L+ + R ELG P + A
Sbjct: 180 EVGVALVKHPAIKAVGFTGSRRGGRALFDAAA---ARPEPIPFYAELGSVNPVFILPGA- 235
Query: 290 LQKAVSGAMAAKF-----RNCGQAC-----VAANRFLIQEQVFDQFVEMLKVEITKSFIQ 339
A+A F GQ C V + D F+ L + +
Sbjct: 236 -LAERGEAIAQGFVGSLTLGAGQFCTNPGLV----LVPAGPAGDAFIAALAEALAAA--- 287
Query: 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTIL--- 396
+ L P I A + V+++ G +V+ GG APT+
Sbjct: 288 -----PAQTMLTPGIAEAYRQGVEALAAAP---GVRVLAGGAAAEGGNQ--AAPTLFKVD 337
Query: 397 --TNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVAN 431
+ L EEVFGP ++ +++ E L VA
Sbjct: 338 AAAFLADPAL--QEEVFGPASLVVRYDDAAELLAVAE 372
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454 |
| >gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 2e-22
Identities = 120/457 (26%), Positives = 185/457 (40%), Gaps = 68/457 (14%)
Query: 31 QAYINGEWVH-SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKE----AFEQWSQTT 85
Y+ G W S P+++P E L V G+ D+ A A+E A T
Sbjct: 6 ANYVAGRWQAGSGAGTPLFDPVTGEELVRVSATGL-DLAAAFAFAREQGGAALRA---LT 61
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-------LGEVVYANSFVDWFSE 138
+R +L +K L+ N+ A +I T SG +S + + Y +
Sbjct: 62 YAQRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGD 121
Query: 139 EARRTYGE---LVPSPV-KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTC 194
GE L P + + +L+ GV I +NFP + K APAL AG
Sbjct: 122 ARLLRDGEAVQLGKDPAFQGQHVLVPTR--GVALFINAFNFPAWGLWEKAAPALLAGVPV 179
Query: 195 VIKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTNANSVGKLLCTSPHVAG---IS 250
++KPA T + A I P G L+VV S LL H+ +S
Sbjct: 180 IVKPATATAWLTQRMVKDVVAAGILPAGALSVV------CGSSAGLL---DHLQPFDVVS 230
Query: 251 FTGSTQVGKILYSHCS--QGIKRLSLE--------LG-----GNAPFIVYSNANLQKAVS 295
FTGS + +L SH + Q R+++E LG G+ F K V
Sbjct: 231 FTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAF-----DLFVKEVV 285
Query: 296 GAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLIN 355
M K GQ C A R + E ++D E L + K+ + G+ +ND +GPL++
Sbjct: 286 REMTVK---SGQKCTAIRRIFVPEALYDAVAEALAARLAKTTV-GN-PRNDGVRMGPLVS 340
Query: 356 LAQVEKVDSIVQDAISKGAKVILGGGKVTKLG-----SKFFAPTILTNITPD--MLCYTE 408
AQ+ V + + A+ A+V+ GG + + PT+L PD +
Sbjct: 341 RAQLAAVRAGLA-ALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVHDV 399
Query: 409 EVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
EVFGPVA + ++ +L +A L +++D
Sbjct: 400 EVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436
|
Length = 521 |
| >gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Score = 93.8 bits (234), Expect = 3e-20
Identities = 118/475 (24%), Positives = 185/475 (38%), Gaps = 103/475 (21%)
Query: 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGV---EDVQYAIMSAKEAFEQWSQTTP 86
Q+Y+ G W + P+++ E +A V G+ + YA A T
Sbjct: 6 QSYVAGRWQTGQGEGRPLHDAVTGEPVARVSSEGLDFAAALAYAREVGGPALRAL---TF 62
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVD---------WFS 137
ER +LK K L K+ L + Q +G T +S++D ++
Sbjct: 63 HERAAMLKALAKYLLERKEELYALSAQ-TGA--TR-------RDSWIDIEGGIGTLFTYA 112
Query: 138 EEARRTYGELVPSPVK--------SKE-------LLMVREPLGVVGLITPWNFPMAMITR 182
+ RR EL V SK +L E GV I +NFP+ +
Sbjct: 113 SKGRR---ELPNDTVLVEGEVEPLSKGGTFAGRHILTPLE--GVAVHINAFNFPVWGMLE 167
Query: 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTNANSVGKLLC 241
K+APA AG ++KPA T A+ L E+ + P+G L ++ S G LL
Sbjct: 168 KLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGS------AGDLL- 220
Query: 242 TSPHVAG---ISFTGSTQVGKILYSH---CSQGIKRLSLE--------LG-----GNAPF 282
H+ G ++FTGS + L +H + + + E LG G F
Sbjct: 221 --DHLDGQDVVTFTGSAATAQKLRAHPNVVANSV-PFTAEADSLNAAILGPDATPGTPEF 277
Query: 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342
++ K V M K GQ C A R ++ + D +E L+ + K + GD
Sbjct: 278 DLFV-----KEVVREMTVK---AGQKCTAIRRAIVPRALVDAVIEALRARLAKVVV-GD- 327
Query: 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG-------GKVTKLGSKFFAPTI 395
+ + +G L +L Q E V V A+ A+++ GG G + G+ FF PT+
Sbjct: 328 PRLEGVRMGALASLEQREDVREKV-AALLAAAEIVFGGPDSFEVVGADAEKGA-FFPPTL 385
Query: 396 LTNITPDMLCYTEEV-----FGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
L P V FGPV+ + + +E++ +A L T D
Sbjct: 386 LYCDDPL---EAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTAD 437
|
Length = 675 |
| >gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 4e-11
Identities = 98/435 (22%), Positives = 169/435 (38%), Gaps = 72/435 (16%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK--ER- 89
+ G+W +S + +P N + VPD +++ + S ++ + K ER
Sbjct: 2 LVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERY 61
Query: 90 ---GIVLKRWLKELEGNKQA--LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR-- 142
G V R EL + A ++ + + K ++LGEVV F++ F+ + R
Sbjct: 62 LLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFL 121
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
VP + ++ R P G V +ITP+NFP+ + ++ AL G ++K
Sbjct: 122 ARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKV 181
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
+ L H +P ++++ S N + LL +P + FTGS++V
Sbjct: 182 SVVMEQFLRLLHLCGMPATDVDLIHSDGPTMNKI--LLEANPRM--TLFTGSSKVA---- 233
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG----------------AMAAKFRNCG 306
+RL+LEL G + +A + G A A G
Sbjct: 234 -------ERLALELHGK---VKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACS----G 279
Query: 307 QACVAANRFLIQEQVFDQ-FVEMLKVEITKSFIQGDTSKNDKCNLGPLI---NLAQVEKV 362
Q C A + E ++ LK + ++ T +GP++ ++ V
Sbjct: 280 QKCSAQSILFAHENWVQAGILDKLKALAEQRKLEDLT-------IGPVLTWTTERILDHV 332
Query: 363 DSIVQDAISKGAKVILGGGKVTK----------LGSKFFAPTILTNITPDMLCYTEEVFG 412
D ++ GAKV+ GG +T + F P I + T EVFG
Sbjct: 333 DKLLA---IPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFG 389
Query: 413 PVAVCIKFKTEEESL 427
P V ++K E+ L
Sbjct: 390 PFQVVTEYKDEQLPL 404
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489 |
| >gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 4e-10
Identities = 72/339 (21%), Positives = 122/339 (35%), Gaps = 51/339 (15%)
Query: 64 VEDVQYAIMSAKEAFE----QWSQTTPKERGIVLKR----WLKELEGNKQALAEIMTQES 115
E I + A + + ERG ++ W+ + ++ L + + E
Sbjct: 15 DEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTER 74
Query: 116 GKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNF 175
G + L+P + E + P+GV I P
Sbjct: 75 GITASVG-------------------HIQDVLLPD---NGETYVRAFPIGVTMHILPSTN 112
Query: 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANS 235
P++ IT +A C+ +P P T ALA L A G +V ++
Sbjct: 113 PLSGIT-SALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDE 171
Query: 236 VGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVS 295
+ + L + P + I TG H S I + GN+P +V A+ ++A
Sbjct: 172 LAEELLSHPKIDLIVATGGRDAVDAAVKH-SPHIPVIGFG-AGNSPVVVDETADEERASG 229
Query: 296 GAMAAKFRNCGQACVAANRFLIQEQV----FDQF-----VEMLKV-EITKSFIQGDTSKN 345
+KF + AC + + + V +++F VE LKV + TK + T
Sbjct: 230 SVHDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVVEGLKVPQETKPLSKETTPSF 288
Query: 346 DKC---NLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
D ++ PL +V V S V++A +I GG
Sbjct: 289 DDEALESMTPLECQFRVLDVISAVENAW----MIIESGG 323
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397 |
| >gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 3e-08
Identities = 102/473 (21%), Positives = 172/473 (36%), Gaps = 76/473 (16%)
Query: 61 DMGVE----DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE------- 109
++GV D + +A A W + R V L+ L +A
Sbjct: 76 ELGVTYPQCDGDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTG 135
Query: 110 ---IMTQESGKPPTESLG--EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL 164
+M ++G P + G V YA + E A + P+K K+ + P
Sbjct: 136 QAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTI-VPR 194
Query: 165 GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL- 223
G+ +I FP + +LA G ++KP A+ LA Q+ + VL
Sbjct: 195 GIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPG------AILPLALTVQVAREVLG 248
Query: 224 ------NVVT-SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL 276
N+VT ++ + + L T P V I FTGS G+ L + Q ++ E
Sbjct: 249 EAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNARQA--QVYTEK 306
Query: 277 GGNAPFIVYSNANLQKAVSGAMAAKFRNC---GQACVAANRFLI--------QEQV-FDQ 324
G I+ S + KA+ +A F GQ C L+ Q + +D+
Sbjct: 307 AGVNTVIIESTDDY-KAMLRNLA--FSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE 363
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCN--LGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
L I + GD + LG + + + + + +A + G +V+L K
Sbjct: 364 VAADLATAIDG--LLGD---PARATAVLGAIQSPDTLAR----IAEARALG-EVLLASTK 413
Query: 383 VTKL---GSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS---NTG 436
+ G++ P +L D Y +E FGP+A + ++ +A S
Sbjct: 414 IEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGA 473
Query: 437 LAGYFFTND-------ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESG 482
+ +T D AW L + + G G+ + AAF +G
Sbjct: 474 MTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTG---GVFVNQSAAFSDFHGTG 523
|
This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551 |
| >gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 3e-07
Identities = 102/470 (21%), Positives = 168/470 (35%), Gaps = 84/470 (17%)
Query: 61 DMGVE----DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE------- 109
++GV D + +A+ A W + R V L+ L +A
Sbjct: 76 ELGVTYPQCDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTG 135
Query: 110 ---IMTQESGKPPTESLG--EVVYANSFVDWFSEEARRTYGELVPSPVK-SKELLMVREP 163
+M ++G P + G V YA + A + P+ K +V P
Sbjct: 136 QAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVV--P 193
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
GV +I FP + +LA G ++KP P L LA Q+ + VL
Sbjct: 194 RGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPH---PAAILPLAI---TVQVAREVL 247
Query: 224 -------NVVT-SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE 275
N+VT ++ T + + L T P V I FTGS G L ++ Q ++ E
Sbjct: 248 AEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQ--AQVYTE 305
Query: 276 LGGNAPFIVYSNANLQKAVSGAMAAKFRNC---GQACVAANRFLI--------QEQV-FD 323
G +V S +L KA+ +A F GQ C + + FD
Sbjct: 306 KAGVNTVVVDSTDDL-KAMLRNLA--FSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFD 362
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCN--LGPLIN---LAQVEKVDSIVQDAISKGAKVIL 378
+ L I + D + LG + + LA++ + + +V+L
Sbjct: 363 EVAADLAAAIDG--LLAD---PARAAALLGAIQSPDTLARIAEA--------RQLGEVLL 409
Query: 379 GGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS-- 433
V ++ P +L D Y EE FGP+A + + + S+ +A S
Sbjct: 410 ASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVR 469
Query: 434 -NTGLAGYFFTND-------ISQAWRVGKKLQVGMVGINEGIISHTEAAF 475
+ + ++ D A G L + + G G+ + AAF
Sbjct: 470 EHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTG---GVFVNQSAAF 516
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549 |
| >gnl|CDD|131570 TIGR02518, EutH_ACDH, acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Score = 51.4 bits (123), Expect = 8e-07
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 21/275 (7%)
Query: 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL 123
++ V+ I SAK A ++ + T ++ ++K + N LA++ +E+G E
Sbjct: 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWE-- 64
Query: 124 GEVVYANSFVDWFSEEA---RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180
+ V N F ++ +T G L S K K+++ + P+GVV + P P +
Sbjct: 65 -DKVIKNVFAATIVYDSIKDMKTIGIL--SEDKEKKVIEIAVPVGVVAGLIPSTNPTSTA 121
Query: 181 TRKVAPALAAGCTCVIKP----AEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSV 236
K ++ A V P + T + A EA P+G + +T +
Sbjct: 122 IYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNE 181
Query: 237 GKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELG-GNAPFIVYSNANLQKAVS 295
L + + I TG + K YS + I +G GN P + AN++KAV
Sbjct: 182 ---LMKNKDTSLILATGGEAMVKAAYSSGTPAIG-----VGPGNGPAYIERTANVKKAVR 233
Query: 296 GAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
+ +K + G C + +++E D VE LK
Sbjct: 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELK 268
|
Length = 488 |
| >gnl|CDD|237956 PRK15398, PRK15398, aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 3e-05
Identities = 85/352 (24%), Positives = 136/352 (38%), Gaps = 60/352 (17%)
Query: 49 NPANDEHLADVPDMGV-EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107
+ A V +MGV V A+ +AK A +++ Q + R ++ + L + + L
Sbjct: 19 SSQTVSPPAAVGEMGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEEL 78
Query: 108 AEIMTQESGKPPTESLGEV---VYANSFVDWFSEEARRTYG--ELVPSPVKSKELLMVRE 162
AE+ +E+G +G V + N A +T G +L + L + E
Sbjct: 79 AELAVEETG------MGRVEDKIAKNVAA------AEKTPGVEDLTTEALTGDNGLTLIE 126
Query: 163 --PLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK 220
P GV+G +TP P I LAAG + V P +L L +EA I
Sbjct: 127 YAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEA-IVA 185
Query: 221 --GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGG 278
G N+V + + L P +A + TG V K G K+ G
Sbjct: 186 AGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAM---KSG-KKAIGAGAG 241
Query: 279 NAPFIVYSNANLQKA----VSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEIT 334
N P +V A+++KA V G A F N C+A ++ + V D+ + +++
Sbjct: 242 NPPVVVDETADIEKAARDIVKG---ASFDN-NLPCIAEKEVIVVDSVADELMRLME---- 293
Query: 335 KSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV--------QDAISKGAKVIL 378
KN L+ Q EK+ +V + + K A IL
Sbjct: 294 ---------KNGAV----LLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKIL 332
|
Length = 465 |
| >gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 71/283 (25%), Positives = 111/283 (39%), Gaps = 37/283 (13%)
Query: 63 GV-EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTE 121
GV V A+ +AK A +Q+ + T +R +++ + L N + LAE+ +E+G
Sbjct: 1 GVFATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETG----- 55
Query: 122 SLGEV---VYANSFVDWFSEEARRTYGE--LVPSPVKSKE---LLMVREPLGVVGLITPW 173
+G V + N A +T G L + S + L+ P GV+G ITP
Sbjct: 56 -MGRVEDKIAKNHLA------AEKTPGTEDLTTT-AWSGDNGLTLVEYAPFGVIGAITPS 107
Query: 174 NFPMAMITRKVAPALAAGCTCVIKP---AEDTPLTALAL--AALAHEAQIPKGVLNVVTS 228
P I LAAG V P A+ A+ L A+A V+ V
Sbjct: 108 TNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEP 167
Query: 229 SRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNA 288
+ N L P + + TG V K S K+ GN P +V A
Sbjct: 168 TIETTNE----LMAHPDINLLVVTGGPAVVKAALSSG----KKAIGAGAGNPPVVVDETA 219
Query: 289 NLQKAVSGAMA-AKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
+++KA + A F N C+A + + V D + ++
Sbjct: 220 DIEKAARDIVQGASFDN-NLPCIAEKEVIAVDSVADYLIAAMQ 261
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429 |
| >gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 0.001
Identities = 39/177 (22%), Positives = 71/177 (40%), Gaps = 19/177 (10%)
Query: 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKP----AEDTPLTALALAALAHEAQ 217
EP+GV+ + P P + K AL + P + + A + A A
Sbjct: 94 EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAG 153
Query: 218 IPKG---VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSL 274
P+G + + T L P V I TG + K YS G + ++
Sbjct: 154 APEGLIQWIEEPSIELTQE------LMKHPDVDLILATGGPGMVKAAYS---SG--KPAI 202
Query: 275 ELG-GNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
+G GN P + A++++AV + +K + G C + ++ ++++D+ LK
Sbjct: 203 GVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRAELK 259
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436 |
| >gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 59/274 (21%), Positives = 111/274 (40%), Gaps = 31/274 (11%)
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYA 129
A+ +AK A + S + + ++ + + E + LA++ E+G E + V
Sbjct: 4 AVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVE---DKVIK 60
Query: 130 NSFVDWFSEEARRTYG----ELVPSPVKSKE---LLMVREPLGVVGLITPWNFPMAMITR 182
N F A Y E + E L++ EP+GVV ITP P + +
Sbjct: 61 NHF------AAEYIYNVYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIF 114
Query: 183 KVAPALAAGCTCVIKP---AEDTPLTALAL---AALAHEAQIPKGVLNVVTSSRTNANSV 236
K +L + + P A+ A L AA+A A P+ ++ + + +
Sbjct: 115 KSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVA--AGAPENLIGWIDNPSI---EL 169
Query: 237 GKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296
+ L P + + TG V K YS K GN P ++ A++++AV
Sbjct: 170 AQRLMKFPGIGLLLATGGPAVVKAAYSSG----KPAIGVGAGNTPVVIDETADIKRAVQS 225
Query: 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330
+ +K + G C + ++ + V+D+ + + +
Sbjct: 226 IVKSKTFDNGVICASEQSVIVVDSVYDEVMRLFE 259
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 507 | |||
| KOG2451|consensus | 503 | 100.0 | ||
| KOG2450|consensus | 501 | 100.0 | ||
| PRK11241 | 482 | gabD succinate-semialdehyde dehydrogenase I; Provi | 100.0 | |
| COG1012 | 472 | PutA NAD-dependent aldehyde dehydrogenases [Energy | 100.0 | |
| PLN02419 | 604 | methylmalonate-semialdehyde dehydrogenase [acylati | 100.0 | |
| PLN02278 | 498 | succinic semialdehyde dehydrogenase | 100.0 | |
| PLN02766 | 501 | coniferyl-aldehyde dehydrogenase | 100.0 | |
| TIGR03374 | 472 | ABALDH 1-pyrroline dehydrogenase. Members of this | 100.0 | |
| PLN02315 | 508 | aldehyde dehydrogenase family 7 member | 100.0 | |
| cd07140 | 486 | ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge | 100.0 | |
| PLN02466 | 538 | aldehyde dehydrogenase family 2 member | 100.0 | |
| cd07113 | 477 | ALDH_PADH_NahF Escherichia coli NAD+-dependent phe | 100.0 | |
| PRK13252 | 488 | betaine aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07142 | 476 | ALDH_F2BC Arabidosis aldehyde dehydrogenase family | 100.0 | |
| TIGR03216 | 481 | OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy | 100.0 | |
| cd07117 | 475 | ALDH_StaphAldA1 Uncharacterized Staphylococcus aur | 100.0 | |
| PLN02467 | 503 | betaine aldehyde dehydrogenase | 100.0 | |
| cd07097 | 473 | ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent | 100.0 | |
| cd07559 | 480 | ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep | 100.0 | |
| PRK13473 | 475 | gamma-aminobutyraldehyde dehydrogenase; Provisiona | 100.0 | |
| cd07085 | 478 | ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog | 100.0 | |
| TIGR02299 | 488 | HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd | 100.0 | |
| cd07130 | 474 | ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se | 100.0 | |
| cd07141 | 481 | ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro | 100.0 | |
| PRK13968 | 462 | putative succinate semialdehyde dehydrogenase; Pro | 100.0 | |
| cd07086 | 478 | ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip | 100.0 | |
| cd07123 | 522 | ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate | 100.0 | |
| TIGR01237 | 511 | D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07124 | 512 | ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl | 100.0 | |
| cd07143 | 481 | ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh | 100.0 | |
| TIGR01236 | 533 | D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| PRK09406 | 457 | gabD1 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| cd07116 | 479 | ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen | 100.0 | |
| cd07144 | 484 | ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd | 100.0 | |
| cd07119 | 482 | ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be | 100.0 | |
| cd07091 | 476 | ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families | 100.0 | |
| PRK09847 | 494 | gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen | 100.0 | |
| TIGR01780 | 448 | SSADH succinate-semialdehyde dehydrogenase. SSADH | 100.0 | |
| cd07088 | 468 | ALDH_LactADH-AldA Escherichia coli lactaldehyde de | 100.0 | |
| PRK03137 | 514 | 1-pyrroline-5-carboxylate dehydrogenase; Provision | 100.0 | |
| TIGR01804 | 467 | BADH glycine betaine aldehyde dehydrogenase. Betai | 100.0 | |
| cd07151 | 465 | ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd | 100.0 | |
| cd07131 | 478 | ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen | 100.0 | |
| TIGR01722 | 477 | MMSDH methylmalonic acid semialdehyde dehydrogenas | 100.0 | |
| cd07083 | 500 | ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)- | 100.0 | |
| PLN00412 | 496 | NADP-dependent glyceraldehyde-3-phosphate dehydrog | 100.0 | |
| cd07138 | 466 | ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac | 100.0 | |
| TIGR03250 | 472 | PhnAcAld_DH putative phosphonoacetaldehyde dehydro | 100.0 | |
| cd07139 | 471 | ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy | 100.0 | |
| PRK09457 | 487 | astD succinylglutamic semialdehyde dehydrogenase; | 100.0 | |
| cd07107 | 456 | ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde | 100.0 | |
| cd07111 | 480 | ALDH_F16 Aldehyde dehydrogenase family 16A1-like. | 100.0 | |
| cd07120 | 455 | ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh | 100.0 | |
| cd07145 | 456 | ALDH_LactADH_F420-Bios Methanocaldococcus jannasch | 100.0 | |
| cd07128 | 513 | ALDH_MaoC-N N-terminal domain of the monoamine oxi | 100.0 | |
| cd07118 | 454 | ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr | 100.0 | |
| cd07110 | 456 | ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro | 100.0 | |
| cd07090 | 457 | ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty | 100.0 | |
| cd07148 | 455 | ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si | 100.0 | |
| cd07150 | 451 | ALDH_VaniDH_like Pseudomonas putida vanillin dehyd | 100.0 | |
| PRK09407 | 524 | gabD2 succinic semialdehyde dehydrogenase; Reviewe | 100.0 | |
| PLN02174 | 484 | aldehyde dehydrogenase family 3 member H1 | 100.0 | |
| cd07115 | 453 | ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy | 100.0 | |
| TIGR03240 | 484 | arg_catab_astD succinylglutamic semialdehyde dehyd | 100.0 | |
| cd07109 | 454 | ALDH_AAS00426 Uncharacterized Saccharopolyspora sp | 100.0 | |
| cd07101 | 454 | ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi | 100.0 | |
| cd07089 | 459 | ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric | 100.0 | |
| TIGR01238 | 500 | D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy | 100.0 | |
| cd07125 | 518 | ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d | 100.0 | |
| cd07106 | 446 | ALDH_AldA-AAD23400 Streptomyces aureofaciens putat | 100.0 | |
| TIGR02278 | 663 | PaaN-DH phenylacetic acid degradation protein paaN | 100.0 | |
| cd07102 | 452 | ALDH_EDX86601 Uncharacterized aldehyde dehydrogena | 100.0 | |
| cd07094 | 453 | ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende | 100.0 | |
| cd07112 | 462 | ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent | 100.0 | |
| cd07082 | 473 | ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat | 100.0 | |
| PF00171 | 462 | Aldedh: Aldehyde dehydrogenase family; InterPro: I | 100.0 | |
| cd07114 | 457 | ALDH_DhaS Uncharacterized Candidatus pelagibacter | 100.0 | |
| cd07147 | 452 | ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1 | 100.0 | |
| PRK11903 | 521 | aldehyde dehydrogenase; Provisional | 100.0 | |
| cd07092 | 450 | ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g | 100.0 | |
| cd07108 | 457 | ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a | 100.0 | |
| cd07099 | 453 | ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di | 100.0 | |
| cd07103 | 451 | ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald | 100.0 | |
| cd07152 | 443 | ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen | 100.0 | |
| PRK11563 | 675 | bifunctional aldehyde dehydrogenase/enoyl-CoA hydr | 100.0 | |
| cd07146 | 451 | ALDH_PhpJ Streptomyces putative phosphonoformaldeh | 100.0 | |
| cd07100 | 429 | ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi | 100.0 | |
| cd07098 | 465 | ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and | 100.0 | |
| cd07093 | 455 | ALDH_F8_HMSADH Human aldehyde dehydrogenase family | 100.0 | |
| cd07149 | 453 | ALDH_y4uC Uncharacterized ALDH (y4uC) with similar | 100.0 | |
| PRK11904 | 1038 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| PLN02203 | 484 | aldehyde dehydrogenase | 100.0 | |
| cd07105 | 432 | ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l | 100.0 | |
| PRK10090 | 409 | aldehyde dehydrogenase A; Provisional | 100.0 | |
| cd07126 | 489 | ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de | 100.0 | |
| cd07095 | 431 | ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde | 100.0 | |
| cd07104 | 431 | ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen | 100.0 | |
| cd07135 | 436 | ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde | 100.0 | |
| PTZ00381 | 493 | aldehyde dehydrogenase family protein; Provisional | 100.0 | |
| cd07137 | 432 | ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m | 100.0 | |
| cd07136 | 449 | ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr | 100.0 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 100.0 | |
| cd07133 | 434 | ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l | 100.0 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 100.0 | |
| cd07134 | 433 | ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro | 100.0 | |
| cd07132 | 443 | ALDH_F3AB Aldehyde dehydrogenase family 3 members | 100.0 | |
| cd07087 | 426 | ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl | 100.0 | |
| cd07129 | 454 | ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr | 100.0 | |
| cd07078 | 432 | ALDH NAD(P)+ dependent aldehyde dehydrogenase fami | 100.0 | |
| TIGR02288 | 551 | PaaN_2 phenylacetic acid degradation protein paaN. | 100.0 | |
| KOG2456|consensus | 477 | 100.0 | ||
| cd07084 | 442 | ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent | 100.0 | |
| KOG2454|consensus | 583 | 100.0 | ||
| cd07127 | 549 | ALDH_PAD-PaaZ Phenylacetic acid degradation protei | 100.0 | |
| cd07121 | 429 | ALDH_EutE Ethanolamine utilization protein EutE-li | 100.0 | |
| cd07081 | 439 | ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh | 100.0 | |
| PRK15398 | 465 | aldehyde dehydrogenase EutE; Provisional | 100.0 | |
| PRK00197 | 417 | proA gamma-glutamyl phosphate reductase; Provision | 100.0 | |
| cd07079 | 406 | ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu | 100.0 | |
| COG4230 | 769 | Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene | 100.0 | |
| KOG2452|consensus | 881 | 100.0 | ||
| cd07122 | 436 | ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr | 100.0 | |
| TIGR02518 | 488 | EutH_ACDH acetaldehyde dehydrogenase (acetylating) | 100.0 | |
| PLN02418 | 718 | delta-1-pyrroline-5-carboxylate synthase | 100.0 | |
| KOG2455|consensus | 561 | 100.0 | ||
| PRK13805 | 862 | bifunctional acetaldehyde-CoA/alcohol dehydrogenas | 100.0 | |
| KOG2453|consensus | 507 | 100.0 | ||
| cd07077 | 397 | ALDH-like NAD(P)+-dependent aldehyde dehydrogenase | 100.0 | |
| TIGR00407 | 398 | proA gamma-glutamyl phosphate reductase. The prosi | 100.0 | |
| cd06534 | 367 | ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s | 100.0 | |
| TIGR01092 | 715 | P5CS delta l-pyrroline-5-carboxylate synthetase. T | 100.0 | |
| cd07080 | 422 | ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac | 100.0 | |
| COG0014 | 417 | ProA Gamma-glutamyl phosphate reductase [Amino aci | 100.0 | |
| KOG4165|consensus | 433 | 99.97 | ||
| PF05893 | 399 | LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086 | 99.82 | |
| KOG2449|consensus | 157 | 99.6 | ||
| PF07368 | 215 | DUF1487: Protein of unknown function (DUF1487); In | 99.21 | |
| PRK11905 | 1208 | bifunctional proline dehydrogenase/pyrroline-5-car | 98.37 | |
| PF00815 | 412 | Histidinol_dh: Histidinol dehydrogenase; InterPro: | 97.69 | |
| cd06572 | 390 | Histidinol_dh Histidinol dehydrogenase, HisD, E.C | 97.5 | |
| PRK12447 | 426 | histidinol dehydrogenase; Reviewed | 97.44 | |
| PRK13770 | 416 | histidinol dehydrogenase; Provisional | 97.32 | |
| PRK00877 | 425 | hisD bifunctional histidinal dehydrogenase/ histid | 97.31 | |
| COG0141 | 425 | HisD Histidinol dehydrogenase [Amino acid transpor | 97.27 | |
| TIGR00069 | 393 | hisD histidinol dehydrogenase. This model describe | 97.17 | |
| PLN02926 | 431 | histidinol dehydrogenase | 97.09 | |
| PRK13769 | 368 | histidinol dehydrogenase; Provisional | 96.93 | |
| PRK11809 | 1318 | putA trifunctional transcriptional regulator/proli | 96.2 | |
| KOG2450|consensus | 501 | 84.72 |
| >KOG2451|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-113 Score=811.26 Aligned_cols=476 Identities=54% Similarity=0.927 Sum_probs=460.7
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..+.||+|+|+++... |++.||++|++|+.++..+.++.+.|+++|.+||++|+.++..+|.++|+++.++|.+|.++
T Consensus 23 ~~~~~igGkWv~s~~~~tF~V~nPa~geii~~V~~~~V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~dd 102 (503)
T KOG2451|consen 23 RAQSYIGGKWVDSPDNKTFEVDNPANGEIIGKVADMTVEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDD 102 (503)
T ss_pred chhccccceeeccCCCCeeeccCCCccchhhcccCCcHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHH
Confidence 5688999999987553 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|+++++.|.|||..||++||.++..+++||++.+++..++..++..+.+...+.+||+||+++|+|||||.....++..+
T Consensus 103 La~iiTlE~GKpL~eA~gEv~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 103 LATIITLENGKPLGEAKGEVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred HHHHHhhhcCCchhhccceeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 99999999999999999999999999999999999999998887778889999999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+||++++|+++..++++..+||+|+|++|+|+++..+..+.++.|+.+|.|+.|+||||+.+|+.++++++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~~qsa 262 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILMAQSA 262 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999643234589999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
...|++.+||||+.|+||++|||+|.|++..+..+|.++||.|.+++|+|||++|||+|+.+|.+++++ +++||.++++
T Consensus 263 stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv~~l~e~vkk-l~vGdG~~~~ 341 (503)
T KOG2451|consen 263 STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFVSKLAEAVKK-LKVGDGLDPG 341 (503)
T ss_pred hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHHHHHHHHHHh-eeccCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+..||||+..+.++++.++++|+.+|+++++||+.....+++|++|||+.+++.+|-+..||+|||+.+|++|+|+||+
T Consensus 342 -tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdteeEv 420 (503)
T KOG2451|consen 342 -TTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTEEEV 420 (503)
T ss_pred -CccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCHHHH
Confidence 9999999999999999999999999999999999655446799999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEeccC
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 506 (507)
|+++|+++.||++|+||+|..+..+++++|++|+|.+|....+....||||+|+||+||+++++|+++|+..|+|++++|
T Consensus 421 i~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgskyGidey~~ik~icig~L 500 (503)
T KOG2451|consen 421 IEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGSKYGIDEYLVIKYICIGTL 500 (503)
T ss_pred HHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCccccccchhhhhhhheeeecCc
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999986
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-110 Score=832.20 Aligned_cols=469 Identities=40% Similarity=0.637 Sum_probs=448.6
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+++.+ .++++||+||+++++|+.++.+||+.|+++||+||+ .|++++..+|.++|++++++++++++
T Consensus 21 ~~lfin~e~~~~~s~kt~~~~nP~tg~~i~~v~~~~~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~ 100 (501)
T KOG2450|consen 21 LGLFINGEFVDSVSGKTFPVVNPATGEVIAKVAEATEEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDAD 100 (501)
T ss_pred hheeecCeeecccCCceeeeecCCCCCeEEEeccccHHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhH
Confidence 37899999998554 399999999999999999999999999999999999 79999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|+.+.+.+.|||..+++ .++..+++.++||+.+++...+...+. ......|+.++|+|||+.|.|||||+....|++
T Consensus 101 ~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~-~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKl 179 (501)
T KOG2450|consen 101 VLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPT-DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKL 179 (501)
T ss_pred HHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCC-CCceEEEecCCcceeeeEeccCchHHHHHHHhh
Confidence 999999999999999999 999999999999999998876654442 345688999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
+|||++||+||+||++++|+++..+++++.++|+|+||+|+|+|. |...+.+|.+|++|++|.||||+.+|+.|+++
T Consensus 180 aPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~---G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~a 256 (501)
T KOG2450|consen 180 APALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGS---GTTAGAALASHPDVDKVAFTGSTPVGKEIMEA 256 (501)
T ss_pred hhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCC---CchHHHHHhhCCCCceEEecCCCcchhHHhhh
Confidence 999999999999999999999999999999999999999999996 78999999999999999999999999999998
Q ss_pred hc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++ .++||++||||||+|.||++|||++.|++.+..+.|+|+||.|++.+|+|||+++||+|+++++++..+.+++|||.
T Consensus 257 aa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 257 AAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHHHHHHHhcccccCCCC
Confidence 88 45899999999999999999999999999999999999999999999999999999999999999995449999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +..||.+++.|++|+.+||+.++++||++++||.+.. +.|+|+.|||+.++.++|.|++||+||||++|++|++.
T Consensus 337 ~~~-~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g-~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~ 414 (501)
T KOG2450|consen 337 DEG-TEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLG-DKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTE 414 (501)
T ss_pred Ccc-cccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccC-CCceEECCeeccCCChhhhhhHhhccCceEEEEecCcH
Confidence 999 9999999999999999999999999999999997743 47999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||+|+++|+++|||++.|||+|.+++.++++++++|+||||+.....+..||||+|+||+||+.|.+++++||+.|+|++
T Consensus 415 eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GRE~g~~~l~~ytevKtv~v 494 (501)
T KOG2450|consen 415 EEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGRELGEYGLEAYTEVKTVTV 494 (501)
T ss_pred HHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCccccHHHHhhcceeeEEEE
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 495 ~ 495 (501)
T KOG2450|consen 495 K 495 (501)
T ss_pred e
Confidence 5
|
|
| >PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-107 Score=855.38 Aligned_cols=468 Identities=50% Similarity=0.891 Sum_probs=442.7
Q ss_pred ceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+. ..++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++|+
T Consensus 12 ~~~i~G~~~~~~~~~~~~v~nP~tg~~v~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (482)
T PRK11241 12 QALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLA 91 (482)
T ss_pred cceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 579999998753 238999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++|++..+++..+...+...++...+++++|+|||++|+|||||+.+.++++++||
T Consensus 92 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (482)
T PRK11241 92 RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPAL 171 (482)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceEEEEECCCcChHHHHHHHHHHHH
Confidence 99999999999999999999999999999988876554433222345568899999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|+ +.++++.|++||+++.|+||||+.+|+.|++.++++
T Consensus 172 aaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~---~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~aa~~ 248 (482)
T PRK11241 172 AAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGS---AGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQCAKD 248 (482)
T ss_pred HhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecC---CchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999985 567899999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +
T Consensus 249 l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~-l~~G~p~~~~-~ 326 (482)
T PRK11241 249 IKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSK-LHIGDGLEKG-V 326 (482)
T ss_pred CCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHHHHHHHhh-CCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
++||++++.+++++.+++++|+++|+++++||..++. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 327 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~-~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~ 405 (482)
T PRK11241 327 TIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHEL-GGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVIA 405 (482)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCC-CCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999976432 589999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|+++|||++||||+|.+.++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 406 ~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~ft~~k~v~~~ 481 (482)
T PRK11241 406 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 481 (482)
T ss_pred HhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCcccHHHHHHHhhcceEEEEe
Confidence 9999999999999999999999999999999999998776666789999999999999999999999999998753
|
|
| >COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-106 Score=842.71 Aligned_cols=466 Identities=46% Similarity=0.778 Sum_probs=443.7
Q ss_pred ceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
++||||+|+.....++++||+||+++++++.++.+|+++|+++|++||+.|+++++.+|.++|++++++|++++++|+.+
T Consensus 2 ~~~i~g~~~~~~~~~~~~nP~tg~~i~~~~~a~~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~ 81 (472)
T COG1012 2 KLLIDGEWVDGASTIEVINPATGEVIATVPAATAEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAAL 81 (472)
T ss_pred CccCCCeecCCCCceeeeCCCCCCEEeeecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 57999999987667999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhc
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 190 (507)
+++|+|||+.+++.|+..+++.++|+++.++++.+...+... +...+++++|+|||++|+|||||+++.+++++|||++
T Consensus 82 ~~~e~Gk~i~ea~~ei~~~~~~~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apALaa 160 (472)
T COG1012 82 ITLETGKPISEARGEIARAADFIRYYAEEARRLEGETIPTDK-GSKALVRREPLGVVGAITPWNFPLALAAWKLAPALAA 160 (472)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCC-CcceEEEeecceEEEEECCCCCHHHHHHhhHHHHHHc
Confidence 999999999999999999999999999999887776533222 6788999999999999999999999999999999999
Q ss_pred CCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccc
Q psy3132 191 GCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270 (507)
Q Consensus 191 GN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 270 (507)
||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.++++.|+.||+|++|+||||+.+|+.|++.+++++|
T Consensus 161 GntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~---~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa~~~k 237 (472)
T COG1012 161 GNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGG---GAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAAANLK 237 (472)
T ss_pred CCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCC---CchHHHHHhcCCCCCEEEEECChHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999986 45699999999999999999999999999999999999
Q ss_pred ccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCcc
Q psy3132 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNL 350 (507)
Q Consensus 271 ~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~ 350 (507)
|+++|||||||+||++|||++.|++.+++++|+|+||.|++++|+|||+++||+|+++|.++ ++.+++|||.|+. +++
T Consensus 238 ~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~-t~~ 315 (472)
T COG1012 238 PVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPS-TDL 315 (472)
T ss_pred cEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCC-Ccc
Confidence 99999999999999999999999999999999999999999999999999999999999999 6669999988888 999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHH
Q psy3132 351 GPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVA 430 (507)
Q Consensus 351 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 430 (507)
||++++.+++++.++|++++++|+.++.||+.. .|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 316 Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~---~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lA 392 (472)
T COG1012 316 GPLISEEQLDRVEGYIEDAVAEGARLLAGGKRP---GGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIELA 392 (472)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCC---CCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999832 28999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 431 NNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 431 n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|+++|||+++|||+|..++.++++++++|+|+||+... ..+.+||||+|.||+|+++|.+++++|++.|+|.++.
T Consensus 393 N~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~~~g~~~~~~~~~~k~v~~~~ 469 (472)
T COG1012 393 NDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGREGGKYGLEEFTEVKTVTIKL 469 (472)
T ss_pred hCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCccchHHHHHHHhcceEEEEec
Confidence 99999999999999999999999999999999998753 3567999999999999999999999999999998764
|
|
| >PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-106 Score=850.46 Aligned_cols=470 Identities=30% Similarity=0.487 Sum_probs=441.2
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|+++|+++++.|++++++
T Consensus 113 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~e 192 (604)
T PLN02419 113 RVPNLIGGSFVESQSSSFIDVINPATQEVVSKVPLTTNEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDK 192 (604)
T ss_pred ccceeECCEEecCCCCceEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4568999999976433 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.||..+++.++|+++.+....+...+....+...+++++|+|||++|+|||||+.+.++++++
T Consensus 193 la~~~~~E~GKp~~ea~~EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~iap 272 (604)
T PLN02419 193 LAMNITTEQGKTLKDSHGDIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFPV 272 (604)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccEEEEECCCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999888776644332223455788999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ .+.++.|+.|++|++|+||||+.+|+.|++.++
T Consensus 273 ALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~----~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~Aa 348 (604)
T PLN02419 273 AVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGT----NDTVNAICDDEDIRAVSFVGSNTAGMHIYARAA 348 (604)
T ss_pred HHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCC----hHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999973 367889999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|++++++ +++|+|.+++
T Consensus 349 ~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l~~~~~~-l~vG~p~d~~ 426 (604)
T PLN02419 349 AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKLVERAKA-LKVTCGSEPD 426 (604)
T ss_pred ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHHHHHHHH-hccCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999 89999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc---cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT---KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++||++++.+++++.+++++|+++|+++++||.... ..+|+|++|||+.+++++|.+++||+||||++|++|+|+
T Consensus 427 -t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 427 -ADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred -CCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 9999999999999999999999999999999997531 125899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC--CCchHHHHHhchhceE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG--REGSRHGMEEFTQIKY 500 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g--~~~g~~~l~~~t~~k~ 500 (507)
||||+++|+++|||++||||+|.+.++++++++++|.|+||+.... .+.+||||+|.||+| +++|++|+++||+.|+
T Consensus 506 dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~~~~G~~gl~~ft~~K~ 585 (604)
T PLN02419 506 DEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVDFFTQIKL 585 (604)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCCcccHHHHHHHhhCeEE
Confidence 9999999999999999999999999999999999999999986433 467899999999999 7999999999999999
Q ss_pred EEecc
Q psy3132 501 MCFGN 505 (507)
Q Consensus 501 v~~~~ 505 (507)
|++++
T Consensus 586 v~~~~ 590 (604)
T PLN02419 586 VTQKQ 590 (604)
T ss_pred EEEcc
Confidence 98763
|
|
| >PLN02278 succinic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-104 Score=837.03 Aligned_cols=482 Identities=54% Similarity=0.932 Sum_probs=450.9
Q ss_pred HHHhhhcc--CCcceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHH
Q psy3132 20 YLQKLCLS--TYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKR 95 (507)
Q Consensus 20 ~~~~~~~~--~~~~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~ 95 (507)
.+.+|... ...++||||+|+.+. ..++++||.||+++++++.++.+|+++|+++|++|++.|+.++.++|.++|++
T Consensus 13 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~ 92 (498)
T PLN02278 13 ALVKLRNAGLLRTQGLIGGKWTDAYDGKTFPVYNPATGEVIANVPCMGRAETNDAIASAHDAFPSWSKLTASERSKILRR 92 (498)
T ss_pred HHHHhhcCCCCcccceECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 34444442 346799999998753 23899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcc
Q psy3132 96 WLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNF 175 (507)
Q Consensus 96 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 175 (507)
+++.|++++++|++++++|+|||..+++.|+..+++.+++++..++...+...+....+...+++++|+|||++|+||||
T Consensus 93 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~ 172 (498)
T PLN02278 93 WYDLIIANKEDLAQLMTLEQGKPLKEAIGEVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVVGAITPWNF 172 (498)
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEEEEECCCcc
Confidence 99999999999999999999999999999999999999999999887766544333334566788999999999999999
Q ss_pred cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCH
Q psy3132 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGST 255 (507)
Q Consensus 176 P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~ 255 (507)
|+.+.++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|+|+|+ +.++++.|+.||+|+.|+||||+
T Consensus 173 P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~fTGS~ 249 (498)
T PLN02278 173 PLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGD---APEIGDALLASPKVRKITFTGST 249 (498)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecC---ChhhHHHHhcCCCcCEEEEECcH
Confidence 999999999999999999999999999999999999999999999999999974 55788999999999999999999
Q ss_pred HHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHh
Q psy3132 256 QVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITK 335 (507)
Q Consensus 256 ~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~ 335 (507)
.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|++|+++|++++++
T Consensus 250 ~~G~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~ 329 (498)
T PLN02278 250 AVGKKLMAGAAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQK 329 (498)
T ss_pred HHHHHHHHHHhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccE
Q psy3132 336 SFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVA 415 (507)
Q Consensus 336 ~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl 415 (507)
+++|+|.+++ +++||++++.+++++.+++++++++|+++++||..... +|+|+.|||+.+++++|++++||+||||+
T Consensus 330 -l~~G~p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~-~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl 406 (498)
T PLN02278 330 -LVVGDGFEEG-VTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSL-GGTFYEPTVLGDVTEDMLIFREEVFGPVA 406 (498)
T ss_pred -cCCCCCCCCC-CcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCceEeeEEEecCCCCChhhhCCCcCCEE
Confidence 9999999999 99999999999999999999999999999999976432 58999999999999999999999999999
Q ss_pred EeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhc
Q psy3132 416 VCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495 (507)
Q Consensus 416 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~ 495 (507)
+|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|
T Consensus 407 ~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f 486 (498)
T PLN02278 407 PLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGREGSKYGIDEY 486 (498)
T ss_pred EEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998766667789999999999999999999999
Q ss_pred hhceEEEeccCC
Q psy3132 496 TQIKYMCFGNLE 507 (507)
Q Consensus 496 t~~k~v~~~~~~ 507 (507)
|+.|+|++++|.
T Consensus 487 t~~k~i~~~~~~ 498 (498)
T PLN02278 487 LEIKYVCLGNMN 498 (498)
T ss_pred heeEEEEEecCC
Confidence 999999998873
|
|
| >PLN02766 coniferyl-aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-104 Score=838.83 Aligned_cols=476 Identities=34% Similarity=0.584 Sum_probs=446.7
Q ss_pred hhccCCcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHH
Q psy3132 24 LCLSTYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKE 99 (507)
Q Consensus 24 ~~~~~~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~ 99 (507)
+.++...++||||+|+.+.. .++++||+||+++++++.++.+|++.|+++|++||+ .|+.++.++|+++|+++++.
T Consensus 15 ~~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~ 94 (501)
T PLN02766 15 VPEIKFTKLFINGEFVDAASGKTFETRDPRTGEVIARIAEGDKEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADL 94 (501)
T ss_pred CCCcccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHH
Confidence 45566678899999997533 399999999999999999999999999999999997 59999999999999999999
Q ss_pred HHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHH
Q psy3132 100 LEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMA 178 (507)
Q Consensus 100 l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 178 (507)
|++++++|++++++|+|||..+++ .|+..+++.+++++..+.+..+...+. ..+...++.++|+|||++|+|||||+.
T Consensus 95 l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~ 173 (501)
T PLN02766 95 IEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKM-SRQLQGYTLKEPIGVVGHIIPWNFPST 173 (501)
T ss_pred HHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecc-CCCceEEEEeccceEEEEECCCCChHH
Confidence 999999999999999999999997 599999999999999887766643322 123456788999999999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g 258 (507)
+.++++++||++||+||+|||+.+|+++.++.+++.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|
T Consensus 174 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~L~~~p~v~~V~FTGS~~~G 250 (501)
T PLN02766 174 MFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGF---GPTAGAAIASHMDVDKVSFTGSTEVG 250 (501)
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHH
Confidence 999999999999999999999999999999999999999999999999985 56789999999999999999999999
Q ss_pred HHHHHhhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcc
Q psy3132 259 KILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSF 337 (507)
Q Consensus 259 ~~i~~~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 337 (507)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +
T Consensus 251 ~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~-l 329 (501)
T PLN02766 251 RKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKD-W 329 (501)
T ss_pred HHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-c
Confidence 99999998 589999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEe
Q psy3132 338 IQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVC 417 (507)
Q Consensus 338 ~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 417 (507)
++|+|.+++ +++||++++.+++++.++|++++.+|+++++||..... +|+|++|||+.+++++|++++||+||||++|
T Consensus 330 ~~G~p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v 407 (501)
T PLN02766 330 VVGDPFDPR-ARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGD-KGYYIEPTIFTDVTEDMKIAQDEIFGPVMSL 407 (501)
T ss_pred cCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhhhCCccCceEEE
Confidence 999999999 99999999999999999999999999999999976432 5899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchh
Q psy3132 418 IKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497 (507)
Q Consensus 418 ~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~ 497 (507)
++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+
T Consensus 408 ~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (501)
T PLN02766 408 MKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGRDQGMDALDKYLQ 487 (501)
T ss_pred EEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999877667789999999999999999999999999
Q ss_pred ceEEEeccC
Q psy3132 498 IKYMCFGNL 506 (507)
Q Consensus 498 ~k~v~~~~~ 506 (507)
.|+|++.+.
T Consensus 488 ~k~v~~~~~ 496 (501)
T PLN02766 488 VKSVVTPLY 496 (501)
T ss_pred eEEEEEecc
Confidence 999988654
|
|
| >TIGR03374 ABALDH 1-pyrroline dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-104 Score=829.72 Aligned_cols=468 Identities=37% Similarity=0.594 Sum_probs=440.2
Q ss_pred cceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 30 TQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++||||+|+.++.. ++++||.||+++++++.++.+|+++|+++|++||+.|++++.++|+++|++++++|++++++|+
T Consensus 2 ~~~~i~g~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (472)
T TIGR03374 2 HKLLINGELVSGEGEKQPVYNPATGEVILEIAEASAEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFA 81 (472)
T ss_pred CCceECCEEecCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 468999999975333 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
+++++|+|||..+++ .|+..+++.+++++..++.+.+...+....+...++.++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~A 161 (472)
T TIGR03374 82 ELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPA 161 (472)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceEEEEECCCCchHHHHHHHHHHH
Confidence 999999999999996 5999999999999988876655422222234567899999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+ +.++++.|+.||++|.|+||||+.+|+.|++.+++
T Consensus 162 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~---~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 237 (472)
T TIGR03374 162 LAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTAP 237 (472)
T ss_pred HhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecC---chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhh
Confidence 99999999999999999999999999985 999999999984 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++
T Consensus 238 ~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-l~~G~p~~~~- 315 (472)
T TIGR03374 238 SIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEKLGAAVAT-LKSGAPDDES- 315 (472)
T ss_pred cccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHHHHHHHhc-CCCCCCCCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCC-CeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.++|++++++| +++++||..... .|+|+.|||+.+++++|++++||+||||++|++|+|.|||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~ea 394 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKG-NGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQV 394 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCC-CCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHH
Confidence 99999999999999999999999999 799999976432 5899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|..++.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 395 i~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~~~ 472 (472)
T TIGR03374 395 VNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHIMVK 472 (472)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCccchHHHHHHhhceEEEEEC
Confidence 999999999999999999999999999999999999998777677899999999999999999999999999998763
|
Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. |
| >PLN02315 aldehyde dehydrogenase family 7 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-103 Score=825.74 Aligned_cols=472 Identities=28% Similarity=0.476 Sum_probs=441.0
Q ss_pred hccCCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 25 CLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 25 ~~~~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.+....++||||+|+.+...++++||.||+++++++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++
T Consensus 16 ~~~~~~~~~I~G~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~ 95 (508)
T PLN02315 16 LSSRNLGCYVGGEWRANGPLVSSVNPANNQPIAEVVEASLEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKL 95 (508)
T ss_pred cCccccCceECCEEecCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHH
Confidence 33456689999999976555999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.++|+++.++.+.+...+....+...+..++|+|||++|+|||||+.++++++
T Consensus 96 ~~la~~~~~e~GK~~~~a~~ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 175 (508)
T PLN02315 96 DYLGRLVSLEMGKILAEGIGEVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNA 175 (508)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999998887766544432234455778999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALA----LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
++||++||+||+|||+.+|+++.. +.++|.++|+|+|++|++++ +.++++.|+.||++++|.||||+.+|+.
T Consensus 176 ~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g----~~~~~~~l~~~~~v~~v~fTGS~~~G~~ 251 (508)
T PLN02315 176 CIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCG----GAEIGEAIAKDTRIPLVSFTGSSKVGLM 251 (508)
T ss_pred hHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecC----ChHHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 999999999999999999999887 67888999999999999986 4678999999999999999999999999
Q ss_pred HHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 261 i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 252 v~~~aa~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~vG 330 (508)
T PLN02315 252 VQQTVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQ-VKIG 330 (508)
T ss_pred HHHHHHhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHHHHHHHHHHHh-cCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++|||+++.+++++.+++++++++|+++++||...+. +|+|++|||+ +++++|++++||+||||++|++|
T Consensus 331 ~p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~-~g~~~~Ptvl-~v~~~~~i~~eE~FGPVl~V~~~ 407 (508)
T PLN02315 331 DPLEKG-TLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIES-EGNFVQPTIV-EISPDADVVKEELFGPVLYVMKF 407 (508)
T ss_pred CCCCCC-CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCeEEecEEE-ecCCCChHHhCCCcCCEEEEEEe
Confidence 999999 99999999999999999999999999999999976432 5899999999 59999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHh--hcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchh
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGK--KLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQ 497 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~--~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~ 497 (507)
+|.||||+++|+++|||++||||+|.+.++++++ ++++|+|+||+.... .+.+||||+|.||+|+++|.+++++||+
T Consensus 408 ~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~ 487 (508)
T PLN02315 408 KTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMR 487 (508)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCccchHHHHHHHhh
Confidence 9999999999999999999999999999999985 799999999986543 4678999999999999999999999999
Q ss_pred ceEEEec
Q psy3132 498 IKYMCFG 504 (507)
Q Consensus 498 ~k~v~~~ 504 (507)
.|+|++.
T Consensus 488 ~k~v~~~ 494 (508)
T PLN02315 488 RSTCTIN 494 (508)
T ss_pred EEEEEEe
Confidence 9998875
|
|
| >cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-103 Score=825.13 Aligned_cols=469 Identities=35% Similarity=0.613 Sum_probs=440.4
Q ss_pred cceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+. ..++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|+++|++++++|+++++
T Consensus 6 ~~~~I~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 85 (486)
T cd07140 6 HQLFINGEFVDAEGGKTYNTINPTDGSVICKVSLATVEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQE 85 (486)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 4689999998753 2389999999999999999999999999999999998 59999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCC--C-CceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPV--K-SKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+|++++++|+|||..+++ .|+..+++.+++++.++++..+...+... + +...+.+++|+|||++|+|||||+.+.+
T Consensus 86 ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~ 165 (486)
T cd07140 86 ELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLA 165 (486)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHH
Confidence 999999999999999996 69999999999999988877654433211 1 2246789999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +.++++.|+.||+|+.|+||||+.+|+.|
T Consensus 166 ~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 242 (486)
T cd07140 166 WKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGS---GSLVGQRLSDHPDVRKLGFTGSTPIGKHI 242 (486)
T ss_pred HHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 56789999999999999999999999999
Q ss_pred HHhhcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 262 YSHCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 262 ~~~~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 243 ~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f~~~l~~~~~~-l~~g 321 (486)
T cd07140 243 MKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKK-MKIG 321 (486)
T ss_pred HHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh-CCcc
Confidence 999996 89999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++||++++.+++++.++|++|+++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|
T Consensus 322 ~p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~ 399 (486)
T cd07140 322 DPLDRS-TDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDR-PGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKF 399 (486)
T ss_pred CCCCCC-CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEc
Confidence 999999 99999999999999999999999999999999976432 5899999999999999999999999999999999
Q ss_pred C--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 421 K--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 421 ~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+ |++|||+++|+++|||++||||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.
T Consensus 400 ~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~ 479 (486)
T cd07140 400 DDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKT 479 (486)
T ss_pred CCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhhcE
Confidence 8 69999999999999999999999999999999999999999999776677799999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|++.
T Consensus 480 k~v~~~ 485 (486)
T cd07140 480 KTVTIE 485 (486)
T ss_pred EEEEEe
Confidence 999764
|
10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. |
| >PLN02466 aldehyde dehydrogenase family 2 member | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-103 Score=828.95 Aligned_cols=470 Identities=38% Similarity=0.603 Sum_probs=441.9
Q ss_pred CcceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 29 YTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 29 ~~~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
..++||||+|+.+. ..++++||.||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 57 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 136 (538)
T PLN02466 57 YTQLLINGQFVDAASGKTFPTLDPRTGEVIAHVAEGDAEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHN 136 (538)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhH
Confidence 45789999998743 2399999999999999999999999999999999997 4999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++ .|+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+.+++++
T Consensus 137 ~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~ 215 (538)
T PLN02466 137 DELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPAD-GPHHVQTLHEPIGVAGQIIPWNFPLLMFAWK 215 (538)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEecceEEEEECCCchHHHHHHHH
Confidence 9999999999999999996 5999999999999998887766544321 2345688999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|++
T Consensus 216 i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~---~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~ 292 (538)
T PLN02466 216 VGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGF---GPTAGAALASHMDVDKLAFTGSTDTGKIVLE 292 (538)
T ss_pred HhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecC---chhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5678899999999999999999999999999
Q ss_pred hhcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 264 HCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 264 ~~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+ +++|+|
T Consensus 293 ~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~vG~p 371 (538)
T PLN02466 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALK-RVVGDP 371 (538)
T ss_pred HHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHHHHHHHh-ccCCCC
Confidence 9984 89999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||...+. .|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 372 ~~~~-~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~-~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d 449 (538)
T PLN02466 372 FKKG-VEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGS-KGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKD 449 (538)
T ss_pred ccCC-CCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCC-CceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCC
Confidence 9999 99999999999999999999999999999999986532 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 450 ~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v~ 529 (538)
T PLN02466 450 LDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVV 529 (538)
T ss_pred HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCcccHHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999999987666778999999999999999999999999999997
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
+.+
T Consensus 530 ~~~ 532 (538)
T PLN02466 530 TPL 532 (538)
T ss_pred EeC
Confidence 754
|
|
| >cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-102 Score=822.08 Aligned_cols=466 Identities=35% Similarity=0.564 Sum_probs=438.3
Q ss_pred eeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH-hhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 32 AYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 32 ~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
+||||+|..+.. .++++||.||+++++++.++.+|+++++++|++|++. |++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 81 (477)
T cd07113 2 HFIDGRPVAGQSEKRLDITNPATEQVIASVASATEADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELA 81 (477)
T ss_pred CeECCEEecCCCCCeEeeeCCCCCCEEEEEcCCCHHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 599999987533 2899999999999999999999999999999999985 9999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCC-----CCCceeEEEeecccEEEEEcCCcccHHhHHh
Q psy3132 109 EIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSP-----VKSKELLMVREPLGVVGLITPWNFPMAMITR 182 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 182 (507)
+++++|+|||..+++. |+..+++.++++++++....+...+.. ..+...+++++|+|||++|+|||||+.+.++
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 82 QLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 9999999999999985 999999999999998877655432211 1123567899999999999999999999999
Q ss_pred hHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 183 ~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +. +++.|++||++|+|+||||+.+|+.|.
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~---~~-~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGK---GA-VGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecC---ch-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999974 44 889999999999999999999999999
Q ss_pred HhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 263 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
+.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p 316 (477)
T cd07113 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSS-FQVGSP 316 (477)
T ss_pred HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHHHHHHHHHHHHHh-CCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.++|++|+++|+++++||..... +|+|+.|||+.+++++|++++||+||||++|++|+|
T Consensus 317 ~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 394 (477)
T cd07113 317 MDES-VMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAG-EGYFVQPTLVLARSADSRLMREETFGPVVSFVPYED 394 (477)
T ss_pred CCCC-CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCC
Confidence 9999 99999999999999999999999999999999976432 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||.+....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 395 ~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 474 (477)
T cd07113 395 EEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGREFGSAFIDDYTELKSVM 474 (477)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999987666678999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 475 ~~ 476 (477)
T cd07113 475 IR 476 (477)
T ss_pred Ee
Confidence 65
|
NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. |
| >PRK13252 betaine aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-102 Score=823.80 Aligned_cols=472 Identities=36% Similarity=0.584 Sum_probs=443.1
Q ss_pred ccCCcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhc
Q psy3132 26 LSTYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGN 103 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 103 (507)
++...++||||+|+.+.. .++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|+++
T Consensus 3 ~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~ 82 (488)
T PRK13252 3 RQPLQSLYIDGAYVEATSGETFEVINPATGEVLATVQAATPADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRER 82 (488)
T ss_pred cCccccccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 345668899999986532 389999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHh
Q psy3132 104 KQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182 (507)
Q Consensus 104 ~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 182 (507)
+++|++++++|+|||..+++ .|+..+++.++++++.++...+...+.. .+...+.+++|+|||++|+|||||+.+.++
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~ 161 (488)
T PRK13252 83 NDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLR-GGSFVYTRREPLGVCAGIGAWNYPIQIACW 161 (488)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccC-CCceEEEEEeeeeEEEEECCCchHHHHHHH
Confidence 99999999999999999997 5999999999999998877665433321 245678899999999999999999999999
Q ss_pred hHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 183 ~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
++++||++||+||+|||+.+|.++..++++|.++|+|+|+||+|+|+ +. +++.|+.||++|.|+||||+.+|+.|.
T Consensus 162 ~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~---~~-~~~~L~~~~~vd~V~fTGS~~~g~~i~ 237 (488)
T PRK13252 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGD---GR-VGAWLTEHPDIAKVSFTGGVPTGKKVM 237 (488)
T ss_pred HHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecC---cH-HHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999974 44 889999999999999999999999999
Q ss_pred HhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 263 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
+.++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 238 ~~aa~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p 316 (488)
T PRK13252 238 AAAAASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVER-IRIGDP 316 (488)
T ss_pred HHHhhcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
.+++ +++||++++.+++++++++++++.+|+++++||...+. .+|+|++|||+.++++++++++||+||||++|++
T Consensus 317 ~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~ 395 (488)
T PRK13252 317 MDPA-TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLT 395 (488)
T ss_pred CCCC-CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEe
Confidence 9999 99999999999999999999999999999999964321 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|
T Consensus 396 ~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 475 (488)
T PRK13252 396 FDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGRENGIATLEHYTQIK 475 (488)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCcCChHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999986666677899999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|++.
T Consensus 476 ~i~~~ 480 (488)
T PRK13252 476 SVQVE 480 (488)
T ss_pred EEEEe
Confidence 99875
|
|
| >cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-102 Score=820.07 Aligned_cols=468 Identities=38% Similarity=0.621 Sum_probs=440.7
Q ss_pred CcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH--hhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 29 YTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
..++||||+|+.+.. .++++||+||+++++++.++.+|+++++++|++||+. |++++.++|.++|++++++|++++
T Consensus 3 ~~~~~i~g~~~~~~~~~~~~v~~P~t~~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (476)
T cd07142 3 HTKLFINGQFVDAASGKTFPTIDPRNGEVIAHVAEGDAEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHA 82 (476)
T ss_pred cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhH
Confidence 456899999986532 3999999999999999999999999999999999975 999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++ .|+..+++.+++++.++++..+...+.. .....++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~ 161 (476)
T cd07142 83 DELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPAD-GPHHVYTLHEPIGVVGQIIPWNFPLLMFAWK 161 (476)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceEEEEEeceeeEEEECCCccHHHHHHHH
Confidence 9999999999999999987 5999999999999998887766543322 2345678999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|+ +.++++.|++||+++.|+||||+.+|+.|++
T Consensus 162 i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 162 VGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGF---GPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCC---chhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5678999999999999999999999999999
Q ss_pred hhcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 264 HCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 264 ~~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
.++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+ +++|+|
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~G~p 317 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALK-RVVGDP 317 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHHHHHHHh-cCCCCC
Confidence 9996 89999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||..... +|+|+.|||+.++++++++++||+||||++|++|+|
T Consensus 318 ~~~~-~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 395 (476)
T cd07142 318 FRKG-VEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGS-KGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKT 395 (476)
T ss_pred CCCC-CcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCC-CCeeEccEEeecCCCCChhhhCCccCceEEEEeeCC
Confidence 9999 99999999999999999999999999999999986532 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 396 ~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 475 (476)
T cd07142 396 VDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGREKGIYALNNYLQVKAVV 475 (476)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHhhheeEEe
Confidence 99999999999999999999999999999999999999999987766778999999999999999999999999999986
Q ss_pred e
Q psy3132 503 F 503 (507)
Q Consensus 503 ~ 503 (507)
+
T Consensus 476 ~ 476 (476)
T cd07142 476 M 476 (476)
T ss_pred C
Confidence 4
|
Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. |
| >TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-102 Score=819.54 Aligned_cols=470 Identities=34% Similarity=0.591 Sum_probs=439.7
Q ss_pred ceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH-hhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
++||||+|+.++..++++||+||+++++++.++.+|++.++++|++||+. |+++|.++|.++|++++++|++++++|++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (481)
T TIGR03216 2 RNFINGAFVESGKTFANINPVDGRVIARVHEAGAAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLA 81 (481)
T ss_pred CceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 57999999975555999999999999999999999999999999999997 99999999999999999999999999999
Q ss_pred HHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEeecccEEEEEcCCcccHHhHHhhHH
Q psy3132 110 IMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSP---VKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
++++|+|||..+++ .|+..+++.++++++.++...+...+.. ..+...+.+++|+|||++|+|||||+.+.+++++
T Consensus 82 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~~ 161 (481)
T TIGR03216 82 AEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKVG 161 (481)
T ss_pred HHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHHH
Confidence 99999999999997 4999999999999998876554432211 1134567889999999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|.++.++.++|.++|+|+|++|+++|++ ..++++.|..||++|.|+||||+.+|+.|++.+
T Consensus 162 ~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~--~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~~~a 239 (481)
T TIGR03216 162 PALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFG--PDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA 239 (481)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCC--hhHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999741 235788999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++
T Consensus 240 a~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~ 318 (481)
T TIGR03216 240 ADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAES-LKIGVPDDP 318 (481)
T ss_pred hcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc----cCCCceeeceEeecCCCCCCCcccceeeccEEeEecC
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT----KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFK 421 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 421 (507)
+ +++||++++.+++++.+++++|+++|+++++||..+. ..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 319 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~~~ 397 (481)
T TIGR03216 319 A-TNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAPFD 397 (481)
T ss_pred C-CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEEeC
Confidence 9 9999999999999999999999999999999997532 1258999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 422 TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 422 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 398 ~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v 477 (481)
T TIGR03216 398 SEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGREGGVHSLEFYTELTNV 477 (481)
T ss_pred CHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCcCchHHHHHHhhceEEE
Confidence 99999999999999999999999999999999999999999998777677899999999999999999999999999999
Q ss_pred Eec
Q psy3132 502 CFG 504 (507)
Q Consensus 502 ~~~ 504 (507)
+++
T Consensus 478 ~~~ 480 (481)
T TIGR03216 478 CIK 480 (481)
T ss_pred EEe
Confidence 763
|
Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation. |
| >cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-102 Score=814.14 Aligned_cols=466 Identities=39% Similarity=0.628 Sum_probs=438.8
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|+++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (475)
T cd07117 2 GLFINGEWVKGSSGETIDSYNPANGETLSEITDATDADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLA 81 (475)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHH
Confidence 4699999987532 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
+++++|+|||..+++ .|+..+++.+++++..++...+...+.. .+...+++++|+|||++|+|||||+.++++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~A 160 (475)
T cd07117 82 MVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMID-EDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAPA 160 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999998 4999999999999988776655433221 23456889999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|.++..+++++.++ +|+|++|+|+|+ +.++++.|+.|+++|.|+||||+.+|+.|.+.+++
T Consensus 161 L~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~ 236 (475)
T cd07117 161 LAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGK---GSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAAK 236 (475)
T ss_pred HHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecC---cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999985 999999999974 56788999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.+ +++|+|.+++
T Consensus 237 ~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~g~p~~~~- 314 (475)
T cd07117 237 KLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFEN-VKVGNPLDPD- 314 (475)
T ss_pred cCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHHHHHHHh-ccCCCCCCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 424 (507)
+++||++++.+++++.+++++++++|+++++||..... .+|+|++|||+.++++++++++||+||||++|++|+|.|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 99999999999999999999999999999999976431 258999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 425 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~~ 473 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGRETHKSMLDAYTQMKNIYI 473 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCCCchHHHHHHHhCeEEEEE
Confidence 9999999999999999999999999999999999999999876667789999999999999999999999999999875
|
Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. |
| >PLN02467 betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-101 Score=815.32 Aligned_cols=472 Identities=38% Similarity=0.634 Sum_probs=443.8
Q ss_pred CCcceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHh-----HHhhcCCHHHHHHHHHHHHHHH
Q psy3132 28 TYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF-----EQWSQTTPKERGIVLKRWLKEL 100 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-----~~w~~~~~~~R~~~L~~~a~~l 100 (507)
...++||||+|+.+. ..++++||+||+++++++.++.+|+++|+++|++|| +.|++++.++|.++|+++++.|
T Consensus 6 ~~~~~~I~g~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l 85 (503)
T PLN02467 6 PRRQLFIGGEWREPVLGKRIPVVNPATEETIGDIPAATAEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKI 85 (503)
T ss_pred CccCceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHH
Confidence 456889999998753 238999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc-cC--CCCCceeEEEeecccEEEEEcCCcccH
Q psy3132 101 EGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-PS--PVKSKELLMVREPLGVVGLITPWNFPM 177 (507)
Q Consensus 101 ~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 177 (507)
++++++|++++++|+|||..+++.|+..+++.++++++.++++.+... +. ...+...+++++|+|||++|+|||||+
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 165 (503)
T PLN02467 86 TERKSELAKLETLDCGKPLDEAAWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPL 165 (503)
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHH
Confidence 999999999999999999999999999999999999999888765431 11 112345788999999999999999999
Q ss_pred HhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHH
Q psy3132 178 AMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257 (507)
Q Consensus 178 ~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~ 257 (507)
.+.++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ +.++++.|+.||.++.|+||||+.+
T Consensus 166 ~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~---~~~~~~~L~~~~~v~~v~fTGs~~~ 242 (503)
T PLN02467 166 LMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGL---GTEAGAPLASHPGVDKIAFTGSTAT 242 (503)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCC---chhHHHHHhcCCCCCEEEEECCHHH
Confidence 9999999999999999999999999999999999999999999999999985 5678999999999999999999999
Q ss_pred HHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcc
Q psy3132 258 GKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSF 337 (507)
Q Consensus 258 g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 337 (507)
|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +
T Consensus 243 g~~v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l 321 (503)
T PLN02467 243 GRKIMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKN-I 321 (503)
T ss_pred HHHHHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred ccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEE
Q psy3132 338 IQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAV 416 (507)
Q Consensus 338 ~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~ 416 (507)
++|+|.+++ +++||++++.+++++.+++++++.+|+++++||..... .+|+|+.|||+.++++++++++||+||||++
T Consensus 322 ~~g~p~~~~-~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~ 400 (503)
T PLN02467 322 KISDPLEEG-CRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLC 400 (503)
T ss_pred CCCCCCCCC-CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEE
Confidence 999999999 99999999999999999999999999999999975421 2589999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhch
Q psy3132 417 CIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496 (507)
Q Consensus 417 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t 496 (507)
|++|+|.||||+++|+++|||+++|||+|.+.++++++++++|+|+||++......+||||+|.||+|+++|++++++||
T Consensus 401 v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft 480 (503)
T PLN02467 401 VKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGRELGEWGLENYL 480 (503)
T ss_pred EEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCCcchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999987665677999999999999999999999999
Q ss_pred hceEEEec
Q psy3132 497 QIKYMCFG 504 (507)
Q Consensus 497 ~~k~v~~~ 504 (507)
+.|+|.+.
T Consensus 481 ~~k~i~~~ 488 (503)
T PLN02467 481 SVKQVTKY 488 (503)
T ss_pred CeEEEEEe
Confidence 99999874
|
|
| >cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-101 Score=814.54 Aligned_cols=468 Identities=37% Similarity=0.607 Sum_probs=442.0
Q ss_pred ceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 31 QAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
++||||+|+.+...++++||. ||+++++++.++.+|+++|+++|++|++.|++++.++|.++|+++++.|++++++|++
T Consensus 2 ~~~i~g~~~~~~~~~~v~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (473)
T cd07097 2 RNYIDGEWVAGGDGEENRNPSDTSDVVGKYARASAEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELAR 81 (473)
T ss_pred CceECCEEecCCCCceeECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 579999999776568999999 5999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhh
Q psy3132 110 IMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALA 189 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALa 189 (507)
++++|+|||..+++.|+..+++.++++++.+++..+...+...++...+.+++|+|||++|+|||||+.+.++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i~~ALa 161 (473)
T cd07097 82 LLTREEGKTLPEARGEVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLITPWNFPIAIPAWKIAPALA 161 (473)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeeeEEEEcccChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776644332223566789999999999999999999999999999999
Q ss_pred cCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 190 AGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 190 aGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
+||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +.++++.|+.|++++.|.||||+.+|+.|++.+++++
T Consensus 162 aGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~ 238 (473)
T cd07097 162 YGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGS---GSEVGQALVEHPDVDAVSFTGSTAVGRRIAAAAAARG 238 (473)
T ss_pred cCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999974 5678999999999999999999999999999999999
Q ss_pred cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCc
Q psy3132 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCN 349 (507)
Q Consensus 270 ~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~ 349 (507)
||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ ++
T Consensus 239 ~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~ 316 (473)
T cd07097 239 ARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKA-LKVGDALDEG-VD 316 (473)
T ss_pred CcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHHHHHHHHh-CCCCCCCCCC-Cc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999 99
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 350 LGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 350 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
+|||+++.+++++.+++++|+++|+++++||...+. ..|+|++|||+.++++++++++||+||||++|++|+|.||||+
T Consensus 317 ~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 396 (473)
T cd07097 317 IGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDYDEALA 396 (473)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCHHHHHH
Confidence 999999999999999999999999999999976432 2488999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC-CCchHHHHHhchhceEEEe
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~ 503 (507)
++|+++|||+++|||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|.+
T Consensus 397 ~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~~~~g~~~l~~f~~~k~v~~ 473 (473)
T cd07097 397 IANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGPREQGEAALEFYTTIKTVYV 473 (473)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcccCCcHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999986653 467999999999999 8999999999999999863
|
Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. |
| >cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-101 Score=813.97 Aligned_cols=467 Identities=37% Similarity=0.609 Sum_probs=440.5
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.. .++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~v~~P~t~~~~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (480)
T cd07559 2 DNFINGEWVAPSKGEYFDNYNPVNGKVLCEIPRSTAEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLA 81 (480)
T ss_pred CccCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999987543 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
+++++|+|||..+++ .|+..+++.++++++.++...+...+. ..+...+..++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 160 (480)
T cd07559 82 VAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEI-DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAPA 160 (480)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 599999999999999887765543322 234567889999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|+ +.++++.|++||+++.|+||||+.+|+.|++.+++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~ 236 (480)
T cd07559 161 LAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGF---GSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAAE 236 (480)
T ss_pred HHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhc
Confidence 99999999999999999999999999996 999999999985 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNA-----NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
++||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|
T Consensus 237 ~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~G~p 315 (480)
T cd07559 237 NLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEA-IKVGNP 315 (480)
T ss_pred cCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-CCCCCC
Confidence 999999999999999999999 99999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
.+++ +++||++++.+++++.+++++|+++|+++++||...+. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 316 ~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 316 LDPE-TMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCC-CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 9999 99999999999999999999999999999999976431 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|.||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k 474 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGRETHKMMLDHYQQTK 474 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999987666678999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|++.
T Consensus 475 ~v~~~ 479 (480)
T cd07559 475 NILVS 479 (480)
T ss_pred EEEEe
Confidence 99764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. |
| >PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-101 Score=813.64 Aligned_cols=469 Identities=38% Similarity=0.607 Sum_probs=442.6
Q ss_pred cceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 30 TQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++||||+|+.++.. ++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 3 ~~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 82 (475)
T PRK13473 3 TKLLINGELVAGEGEKQPVYNPATGEVLAEIAEASAAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFA 82 (475)
T ss_pred ccceECCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467999999875333 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
+++++|+|||..+++ .|+..+++.+++++..++.+.+...+....+...+.+++|+|||++|+|||||+...++++++|
T Consensus 83 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~~A 162 (475)
T PRK13473 83 RLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLAPA 162 (475)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceeEEEEccCChHHHHHHHHHHHH
Confidence 999999999999986 4999999999999988887765433222234456889999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|+++..+.+++.++ +|+|++|+|+|+ +.++++.|+.|+++|.|+||||+.+|+.|++.++.
T Consensus 163 LaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~---~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~aa~ 238 (475)
T PRK13473 163 LAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGR---GATVGDALVGHPKVRMVSLTGSIATGKHVLSAAAD 238 (475)
T ss_pred HhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 99999999999999999999999999999 999999999974 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
+++|+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++
T Consensus 239 ~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~G~p~~~~- 316 (475)
T PRK13473 239 SVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVAT-LKVGDPDDED- 316 (475)
T ss_pred cCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCC-CeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++| +++++||...+. .|+|++|||+.++++++++++||+||||++|++|+|.|||
T Consensus 317 ~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 317 TELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDG-KGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCC-CceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 99999999999999999999999999 999999986532 5899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|+++|+++|||++||||+|.+.+.++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++|
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~t~~k~i~~~~ 474 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGKDMSLYGLEDYTVVRHVMVKH 474 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceEEEEEec
Confidence 9999999999999999999999999999999999999998776778999999999999999999999999999998877
|
|
| >cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-101 Score=813.17 Aligned_cols=469 Identities=33% Similarity=0.512 Sum_probs=439.4
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.. .++++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 81 (478)
T cd07085 2 KLFINGEWVESKTTEWLDVYNPATGEVIARVPLATAEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELA 81 (478)
T ss_pred CceECCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999997643 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.+++++..++...+...+....+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~AL 161 (478)
T cd07085 82 RLITLEHGKTLADARGDVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAI 161 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999877766554433222345678999999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++..+.++|.++|+|+|++|+++| +.+.++.|++||+++.|+||||+.+|+.|++.++++
T Consensus 162 aaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g----~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~ 237 (478)
T cd07085 162 ACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHG----GKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAAAN 237 (478)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEec----CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999997 346789999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +
T Consensus 238 ~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~-l~~G~p~~~~-~ 315 (478)
T cd07085 238 GKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKLVERAKK-LKVGAGDDPG-A 315 (478)
T ss_pred CCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHHHHHHHh-CCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
++||++++.+++++.+++++++++|+++++||..... .+|+|+.|||+.++++++++++||+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~de 395 (478)
T cd07085 316 DMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDE 395 (478)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999999975321 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC--CCchHHHHHhchhceEEE
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG--REGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g--~~~g~~~l~~~t~~k~v~ 502 (507)
||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++++++||+.|+|+
T Consensus 396 ai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~~~~~g~~~~~~~~~~k~v~ 475 (478)
T cd07085 396 AIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGDLHFYGKDGVRFYTQTKTVT 475 (478)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCCCcCChHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999999987543 367899999999999 478999999999999998
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
+.+
T Consensus 476 ~~~ 478 (478)
T cd07085 476 SRW 478 (478)
T ss_pred EeC
Confidence 653
|
Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. |
| >TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-101 Score=816.40 Aligned_cols=467 Identities=37% Similarity=0.617 Sum_probs=439.5
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.. .++++||.||+++++++.++.+|++.++++|++|++.|++++.++|.++|++++++|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~ 81 (488)
T TIGR02299 2 GHFIDGEFVPSESGETFETLSPATNEVLGSVARGGAADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIA 81 (488)
T ss_pred CccCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5699999987643 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHH-HhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEAR-RTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
+++++|+|||..+++.|+..+++.++++++.++ ...+...+. .....+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 159 (488)
T TIGR02299 82 VLECLDCGQPLRQTRQQVIRAAENFRFFADKCEEAMDGRTYPV--DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIAPA 159 (488)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHhHHHhcCCccccC--CCceEEEEEEecceEEEECCCccHHHHHHHHHHHH
Confidence 999999999999999999999999999998877 333333322 23456788999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|.++.++.++|.++|+|+|++|+|+|+ +.++++.|+.||.+|.|+||||+.+|+.|++.+++
T Consensus 160 LaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~aa~ 236 (488)
T TIGR02299 160 LAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGF---GEEAGKALVAHPDVKAVSFTGETATGSIIMRNGAD 236 (488)
T ss_pred HHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCC---chHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999974 56788899999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 237 ~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~-l~~g~p~~~~- 314 (488)
T TIGR02299 237 TLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRA-IRVGHPLDPE- 314 (488)
T ss_pred cCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHHHHHHHhh-CCcCCCCCCC-
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc------CCCceeeceEeecCCCCCCCcccceeeccEEeEecC
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK------LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFK 421 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 421 (507)
+++||++++.+++++.+++++++++|+++++||..... .+|+|++|||+.++++++++++||+||||++|++|+
T Consensus 315 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~ 394 (488)
T TIGR02299 315 TEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIPFK 394 (488)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEeeC
Confidence 99999999999999999999999999999999975321 248899999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 422 TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 422 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|
T Consensus 395 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~~~k~i 474 (488)
T TIGR02299 395 DEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGREGGTYSFDFYTETKNV 474 (488)
T ss_pred CHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceEEE
Confidence 99999999999999999999999999999999999999999998776667899999999999999999999999999999
Q ss_pred Eec
Q psy3132 502 CFG 504 (507)
Q Consensus 502 ~~~ 504 (507)
+++
T Consensus 475 ~~~ 477 (488)
T TIGR02299 475 ALA 477 (488)
T ss_pred EEe
Confidence 875
|
This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. |
| >cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-101 Score=810.27 Aligned_cols=464 Identities=32% Similarity=0.516 Sum_probs=434.1
Q ss_pred eECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHH
Q psy3132 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMT 112 (507)
Q Consensus 33 ~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 112 (507)
+|||+|+.++..++++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|+++++
T Consensus 2 ~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 81 (474)
T cd07130 2 VYDGEWGGGGGVVTSISPANGEPIARVRQATPEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVS 81 (474)
T ss_pred eECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999998655599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCC
Q psy3132 113 QESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGC 192 (507)
Q Consensus 113 ~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN 192 (507)
+|+|||..+++.|+..+++.++++++..+.+.+...+...++...+.+++|+|||++|+|||||+.++++++++||++||
T Consensus 82 ~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN 161 (474)
T cd07130 82 LEMGKILPEGLGEVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAIALVCGN 161 (474)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecceeEEEEccCCCHHHHHHHHhhHHHHcCC
Confidence 99999999999999999999999998877665544332233455678899999999999999999999999999999999
Q ss_pred eEEeccCCCChHHHHHHHHH----HHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 193 TCVIKPAEDTPLTALALAAL----AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 193 ~Vvlkps~~~~~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
+||+|||+.+|.++..+.++ |.++|+|+|++|+|+|+ .+.++.|++||+||+|+||||+.+|+.|++.++++
T Consensus 162 ~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~----~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa~~ 237 (474)
T cd07130 162 VVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGG----ADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVAAR 237 (474)
T ss_pred eEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCC----hhHHHHHhcCCCCCEEEEECchHHHHHHHHHHHhc
Confidence 99999999999999887765 57999999999999973 45789999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +
T Consensus 238 ~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~g~p~~~~-~ 315 (474)
T cd07130 238 FGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQ-VRIGDPLDDG-T 315 (474)
T ss_pred CCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHHHHHHHHHHHhc-CCcCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999998 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
++||++++.+++++.+++++|+++|+++++||...+. +|+|++|||+.++++ |++++||+||||++|++|+|+||||+
T Consensus 316 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~~~~-~~i~~eE~FGPvl~v~~~~~~~eai~ 393 (474)
T cd07130 316 LVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDG-PGNYVEPTIVEGLSD-APIVKEETFAPILYVLKFDTLEEAIA 393 (474)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCeEEccEEEecCCC-CHHHhCCCcCCeEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999986432 589999999998776 99999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhh--cceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKK--LQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~--l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|+++|||++||||+|.+.+++++++ +++|+|+||..+. ..+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 394 ~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 472 (474)
T cd07130 394 WNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCTIN 472 (474)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCccchHHHHHHHhheEEEEEe
Confidence 999999999999999999999999987 9999999998654 356799999999999999999999999999998875
|
Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. |
| >cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-101 Score=811.21 Aligned_cols=471 Identities=37% Similarity=0.606 Sum_probs=442.0
Q ss_pred cCCcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHH
Q psy3132 27 STYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELE 101 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~ 101 (507)
....++||||+|+.+.. .++++||.||+++++++.++.+|+++++++|++|++ .|++++.++|.++|+++++.|+
T Consensus 4 ~~~~~~~I~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~ 83 (481)
T cd07141 4 IKYTKIFINNEWHDSVSGKTFPTINPATGEKICEVQEGDKADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIE 83 (481)
T ss_pred cccccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHH
Confidence 34567899999987532 389999999999999999999999999999999998 6999999999999999999999
Q ss_pred hcHHHHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhH
Q psy3132 102 GNKQALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180 (507)
Q Consensus 102 ~~~~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 180 (507)
++.++|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+.+++|+|||++|+|||||+.++
T Consensus 84 ~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 162 (481)
T cd07141 84 RDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMD-GDFFTYTRHEPVGVCGQIIPWNFPLLMA 162 (481)
T ss_pred HhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCC-CCceEEEEEeceeEEEEEccChhHHHHH
Confidence 999999999999999999766 46999999999999998887766443321 2345678999999999999999999999
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|+.||++|.|+||||+.+|+.
T Consensus 163 ~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~vd~V~ftGs~~~g~~ 239 (481)
T cd07141 163 AWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGY---GPTAGAAISSHPDIDKVAFTGSTEVGKL 239 (481)
T ss_pred HHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHH
Confidence 9999999999999999999999999999999999999999999999985 5578899999999999999999999999
Q ss_pred HHHhhcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc
Q psy3132 261 LYSHCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ 339 (507)
Q Consensus 261 i~~~~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~ 339 (507)
|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 240 i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~ 318 (481)
T cd07141 240 IQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKK-RVV 318 (481)
T ss_pred HHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHHHHHHHh-CCC
Confidence 9999886 89999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 340 g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
|+|.+++ +++||++++.+++++.+++++|+++|+++++||+..+. .|+|+.|||+.++++++++++||+||||++|++
T Consensus 319 G~p~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 396 (481)
T cd07141 319 GNPFDPK-TEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGD-KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFK 396 (481)
T ss_pred CCCCCCC-CCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhhhccccCCeEEEEe
Confidence 9999999 99999999999999999999999999999999987532 589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 397 ~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k 476 (481)
T cd07141 397 FKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGRELGEYGLQEYTEVK 476 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCccchHHHHHHHhheE
Confidence 99999999999999999999999999999999999999999999987666778999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 477 ~v~~~ 481 (481)
T cd07141 477 TVTIK 481 (481)
T ss_pred EEEEC
Confidence 98763
|
NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. |
| >PRK13968 putative succinate semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-100 Score=803.33 Aligned_cols=457 Identities=32% Similarity=0.556 Sum_probs=429.8
Q ss_pred CCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhh
Q psy3132 42 SKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTE 121 (507)
Q Consensus 42 ~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 121 (507)
.+.++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|+++|+++++.|++++++|++++++|+|||..+
T Consensus 6 ~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T PRK13968 6 ATHAISVNPATGEQLSVLPWAGADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPINQ 85 (462)
T ss_pred CCceEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHH
Confidence 34478999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCC
Q psy3132 122 SLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201 (507)
Q Consensus 122 a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~ 201 (507)
++.|+..+++.+++++..++...+.... ...+...+++++|+|||++|+|||||++++++++++||++||+||+|||+.
T Consensus 86 a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~ 164 (462)
T PRK13968 86 ARAEVAKSANLCDWYAEHGPAMLKAEPT-LVENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPN 164 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccc-cCCCceEEEEEeccceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCc
Confidence 9999999999999999887765432211 123456789999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCc
Q psy3132 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP 281 (507)
Q Consensus 202 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~ 281 (507)
+|+++.++.+++.++|+|+|++|+|+|+ +. ....|+.||++|.|+||||+.+|+.|++.+++++||+++|+|||||
T Consensus 165 tp~~~~~l~~~~~~aGlP~gv~~~v~g~---~~-~~~~l~~~~~v~~V~fTGs~~~G~~i~~~aa~~l~~~~lElGGk~p 240 (462)
T PRK13968 165 VMGCAQLIAQVFKDAGIPQGVYGWLNAD---ND-GVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240 (462)
T ss_pred ChHHHHHHHHHHHHcCcCcCcEEEEecC---ch-hhHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEecCCCCc
Confidence 9999999999999999999999999974 33 3455889999999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHH
Q psy3132 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 282 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.++++
T Consensus 241 ~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~Gpli~~~~~~~ 318 (462)
T PRK13968 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAA-LKMGDPRDEE-NALGPMARFDLRDE 318 (462)
T ss_pred eEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHHHHhc-CCcCCCCCCC-CCcCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999998 99999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+.+++++++.+|+++++||..... .|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||
T Consensus 319 ~~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v 397 (462)
T PRK13968 319 LHHQVEATLAEGARLLLGGEKIAG-AGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATI 397 (462)
T ss_pred HHHHHHHHHHCCCEEEeCCCcCCC-CceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEE
Confidence 999999999999999999976532 4899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEeccC
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 506 (507)
||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|.+.++
T Consensus 398 ~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~ft~~k~v~~~~~ 462 (462)
T PRK13968 398 FTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGRELSHFGLHEFCNIQTVWKDRI 462 (462)
T ss_pred EcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCcCchHHHHHHhcceeEEEEecC
Confidence 99999999999999999999999877666789999999999999999999999999999988653
|
|
| >cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-100 Score=807.53 Aligned_cols=467 Identities=36% Similarity=0.564 Sum_probs=440.4
Q ss_pred eeECCEeeeCC-CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 32 AYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 32 ~~I~G~~~~~~-~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
+||||+|+.+. ..++++||+||+++++++.++.+|++.++++|++|++.|++++.++|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (478)
T cd07086 1 GVIGGEWVGSGGETFTSRNPANGEPIARVFPASPEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRL 80 (478)
T ss_pred CcCCCEEecCCCCEEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 58999999765 33899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhc
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 190 (507)
+++|+|||..+++.|+..+++.+++++..++.+.+...+...++...+.+++|+|||++|+|||||+.++++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaa 160 (478)
T cd07086 81 VSLEMGKILPEGLGEVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVC 160 (478)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceeEEEECCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998887766544333334567889999999999999999999999999999999
Q ss_pred CCeEEeccCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 191 GCTCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 191 GN~Vvlkps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||+||+|||+.+|.++..++++|.++ |+|+|++|+|+++ + ++++.|..||++|.|.||||+.+|+.|++.++
T Consensus 161 GN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~---~-~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa 236 (478)
T cd07086 161 GNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGG---G-DGGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236 (478)
T ss_pred CCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecC---c-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999 9999999999974 3 38899999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
++++|+++|+|||||+||++|||++.|++.|++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 237 ~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~ 315 (478)
T cd07086 237 RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEFLERLVKAYKQ-VRIGDPLDEG 315 (478)
T ss_pred ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHHHHHHHHHHHh-CCcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999998
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+++||++++.+++++.+++++|+++|+++++||..... .+|+|++|||+.++++++++++||+||||++|++|+|+||
T Consensus 316 -~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~de 394 (478)
T cd07086 316 -TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEE 394 (478)
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHH
Confidence 99999999999999999999999999999999976431 1488999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhh--cceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKK--LQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~--l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
||+++|+++|||++||||+|.+.+++++++ +++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 395 ai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~f~~~k~i~ 474 (478)
T cd07086 395 AIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESGSDAWKQYMRRSTCT 474 (478)
T ss_pred HHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCccchHHHHHHhhceEEEE
Confidence 999999999999999999999999999999 99999999987654 467899999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 475 ~~ 476 (478)
T cd07086 475 IN 476 (478)
T ss_pred Ee
Confidence 75
|
ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). |
| >cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-100 Score=811.98 Aligned_cols=482 Identities=24% Similarity=0.335 Sum_probs=443.1
Q ss_pred hhHHHHHhhhccCC----cceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHH
Q psy3132 16 MHMKYLQKLCLSTY----TQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90 (507)
Q Consensus 16 ~~~~~~~~~~~~~~----~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~ 90 (507)
.+..+.+++..+.. .++||||+|+.+...++++||+| |+++++++.++.+|+++|+++|++||+.|++++.++|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~v~~P~~tg~~l~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~ 94 (522)
T cd07123 15 ERAKLQEALAELKSLTVEIPLVIGGKEVRTGNTGKQVMPHDHAHVLATYHYADAALVEKAIEAALEARKEWARMPFEDRA 94 (522)
T ss_pred HHHHHHHHHHHHhhhccccCeeECCEEcCCCCeEEEECCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 35666666666555 78999999997765599999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-cHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecc-cEE
Q psy3132 91 IVLKRWLKELEG-NKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL-GVV 167 (507)
Q Consensus 91 ~~L~~~a~~l~~-~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv 167 (507)
++|+++++.|++ ++++|++++++|+|||..++.. |+...++.++|++.++.+..+........+...+++++|+ |||
T Consensus 95 ~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv 174 (522)
T cd07123 95 AIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNRLEYRPLEGFV 174 (522)
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCceE
Confidence 999999999996 8999999999999999999864 7888999999999988776554322222245678899998 999
Q ss_pred EEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCcc
Q psy3132 168 GLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVA 247 (507)
Q Consensus 168 ~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~ 247 (507)
++|+|||||+.+..+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|+.||+++
T Consensus 175 ~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~---~~~~g~~L~~~~~v~ 250 (522)
T cd07123 175 YAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGD---GPVVGDTVLASPHLA 250 (522)
T ss_pred EEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecC---chHHHHHHhcCCCcC
Confidence 999999999999999999999 5999999999999999999999999999999999999984 567899999999999
Q ss_pred EEEEeCCHHHHHHHHHhhccccc------ccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhh
Q psy3132 248 GISFTGSTQVGKILYSHCSQGIK------RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321 (507)
Q Consensus 248 ~v~ftGs~~~g~~i~~~~~~~~~------~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i 321 (507)
+|+||||+.+|+.|++.++++++ |+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++
T Consensus 251 ~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i 330 (522)
T cd07123 251 GLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESL 330 (522)
T ss_pred EEEEECCHHHHHHHHHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHH
Confidence 99999999999999999998887 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK-GAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 322 ~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++ |+++++||..+.. +|+|++|||+.+++
T Consensus 331 ~d~f~~~l~~~~~~-l~~G~p~d~~-t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~-~g~f~~PTvl~~v~ 407 (522)
T cd07123 331 WPEVKERLLEELKE-IKMGDPDDFS-NFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDS-VGYFVEPTVIETTD 407 (522)
T ss_pred HHHHHHHHHHHHhh-CccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCC-CCceEcCEEEeCCC
Confidence 99999999999999 9999999999 9999999999999999999999999 9999999976432 58999999999999
Q ss_pred CCCCCcccceeeccEEeEecCC--HHHHHHHHhcCC-CCcEEEEecCCHHHHHHHHhhc--ceeeEEEcCCCCC--CCCC
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKT--EEESLCVANNSN-TGLAGYFFTNDISQAWRVGKKL--QVGMVGINEGIIS--HTEA 473 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~-~gl~a~v~t~d~~~~~~~~~~l--~~G~v~iN~~~~~--~~~~ 473 (507)
++|++++||+||||++|++|++ +||+|+++|+++ |||++||||+|.+.+.++++++ ++|+|+||+.... .+.+
T Consensus 408 ~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~ 487 (522)
T cd07123 408 PKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQ 487 (522)
T ss_pred CCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCC
Confidence 9999999999999999999995 799999999985 9999999999999999999996 5999999987653 3578
Q ss_pred cccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 474 AFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 474 pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.||+| +++|++++++||+.|+++..
T Consensus 488 PfGG~k~SG~gg~~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 488 PFGGARASGTNDKAGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred CCCcchhcCCCcccCCHHHHHHhcceEEEEEe
Confidence 99999999996 99999999999999998753
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. |
| >TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-100 Score=810.58 Aligned_cols=491 Identities=29% Similarity=0.466 Sum_probs=451.7
Q ss_pred CcccchHHhhHHHHHhhhc-----cCCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhHHh
Q psy3132 8 GYSVTVKQMHMKYLQKLCL-----STYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFEQW 81 (507)
Q Consensus 8 g~~~~~~~~~~~~~~~~~~-----~~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~w 81 (507)
+++....+.++.+..++.. +...++||||+|+.+...+.++||+ ||+++++++.++.+|++.|+++|++|++.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~~~~~i~~~~~~~~~~v~~av~~A~~A~~~W 85 (511)
T TIGR01237 6 FTDFADADLVQAAFQALARVKEQLGKTYPLYINGEYVETENKIDSINPCDPSEVVGKVGKASVEQAEHALQIAKKAFEAW 85 (511)
T ss_pred ccccCcHHHHHHHHHHHHHHHHhhccccceeECCEEecCCCeEEeECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 3444445556666656655 3455789999999776559999999 599999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe
Q psy3132 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161 (507)
Q Consensus 82 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++...+...+....+...++++
T Consensus 86 ~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 165 (511)
T TIGR01237 86 KKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIPEADAEVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFY 165 (511)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999988877654332223355678899
Q ss_pred ecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh
Q psy3132 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC 241 (507)
Q Consensus 162 ~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~ 241 (507)
+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|+ +.++++.|+
T Consensus 166 ~P~GVV~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~---~~~~~~~L~ 242 (511)
T TIGR01237 166 QPRGVAVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGK---GSEVGSYLV 242 (511)
T ss_pred ecceeEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCC---CchhHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 567899999
Q ss_pred cCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcce
Q psy3132 242 TSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRF 315 (507)
Q Consensus 242 ~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v 315 (507)
.||+++.|.||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus 243 ~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv 322 (511)
T TIGR01237 243 NHPKTHLITFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRV 322 (511)
T ss_pred cCCCCCeEEEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEE
Confidence 9999999999999999999999887 5889999999999999999999999999999999999999999999999
Q ss_pred echhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceE
Q psy3132 316 LIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTI 395 (507)
Q Consensus 316 ~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptv 395 (507)
|||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.+++++++++| ++++||..... .|+|++|||
T Consensus 323 ~V~~~i~d~f~~~L~~~~~~-l~~g~~~~~~-~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~-~g~~~~Ptv 398 (511)
T TIGR01237 323 VVLSPVYDAVVERFVEATRS-LNVGPTDDPS-TQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPS-EGYFIGPTI 398 (511)
T ss_pred EEehhHHHHHHHHHHHHHHh-CCCCCCCCCC-CcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCC-CCeEEcCEE
Confidence 99999999999999999999 9999999998 99999999999999999999999999 88999875432 589999999
Q ss_pred eecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCC
Q psy3132 396 LTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTEA 473 (507)
Q Consensus 396 l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~ 473 (507)
+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.... .+.+
T Consensus 399 l~~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~ 478 (511)
T TIGR01237 399 FKDVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQ 478 (511)
T ss_pred EeCCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987653 3468
Q ss_pred cccCCCCCCCCC-CchHHHHHhchhceEEEecc
Q psy3132 474 AFGGVKESGLGR-EGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 474 pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 505 (507)
||||+|.||+|+ ++|++++++||+.|+|+.+|
T Consensus 479 PfGG~k~SG~G~~~~g~~~l~~~~~~k~v~~~~ 511 (511)
T TIGR01237 479 PFGGFKMSGTDSKAGGPDYLLQFMQPKTVTENI 511 (511)
T ss_pred CCCccccccCCCcCCCHHHHHHhcceEEEEEeC
Confidence 999999999995 79999999999999998765
|
This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs. |
| >cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-100 Score=811.73 Aligned_cols=491 Identities=32% Similarity=0.494 Sum_probs=454.5
Q ss_pred CcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHh
Q psy3132 8 GYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQW 81 (507)
Q Consensus 8 g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w 81 (507)
+.+++.++....+.+++..+ ...++||||+|+.+...++++||+| |+++++++.++.+|+++++++|++|++.|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~~~~v~~av~~A~~A~~~W 85 (512)
T cd07124 6 FTDFADEENRAAFRAALARVREELGREYPLVIGGKEVRTEEKIESRNPADPSEVLGTVQKATKEEAEAAVQAARAAFPTW 85 (512)
T ss_pred ccccCcHHHHHHHHHHHHHHHhhcccccceeECCEEecCCCeEEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 34556667776666665553 2447899999997655599999998 99999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe
Q psy3132 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161 (507)
Q Consensus 82 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.+++..+...+. ..+...++++
T Consensus 86 ~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 164 (512)
T cd07124 86 RRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADADVAEAIDFLEYYAREMLRLRGFPVEM-VPGEDNRYVY 164 (512)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEE
Confidence 999999999999999999999999999999999999999999999999999999999988775543332 2345678999
Q ss_pred ecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh
Q psy3132 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC 241 (507)
Q Consensus 162 ~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~ 241 (507)
+|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|+ +.++++.|+
T Consensus 165 ~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~---~~~~~~~L~ 241 (512)
T cd07124 165 RPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGP---GEEVGDYLV 241 (512)
T ss_pred ecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccC---chHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999984 567899999
Q ss_pred cCCCccEEEEeCCHHHHHHHHHhhcc------cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcce
Q psy3132 242 TSPHVAGISFTGSTQVGKILYSHCSQ------GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRF 315 (507)
Q Consensus 242 ~~~~v~~v~ftGs~~~g~~i~~~~~~------~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v 315 (507)
.||++|.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus 242 ~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv 321 (512)
T cd07124 242 EHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRV 321 (512)
T ss_pred cCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEE
Confidence 99999999999999999999999886 689999999999999999999999999999999999999999999999
Q ss_pred echhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeece
Q psy3132 316 LIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPT 394 (507)
Q Consensus 316 ~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Pt 394 (507)
|||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.++|++++. |+++++||..+.. .+|+|+.||
T Consensus 322 ~V~~~i~~~f~~~l~~~~~~-~~~g~p~d~~-~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Pt 398 (512)
T cd07124 322 IVHESVYDEFLERLVERTKA-LKVGDPEDPE-VYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPT 398 (512)
T ss_pred EEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCE
Confidence 99999999999999999999 9999999999 999999999999999999999998 8999999976532 258999999
Q ss_pred EeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCC
Q psy3132 395 ILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTE 472 (507)
Q Consensus 395 vl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~ 472 (507)
|+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.
T Consensus 399 vl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~ 478 (512)
T cd07124 399 IFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKITGALVGR 478 (512)
T ss_pred EEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987643 356
Q ss_pred CcccCCCCCCCC-CCchHHHHHhchhceEEEecc
Q psy3132 473 AAFGGVKESGLG-REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 473 ~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 505 (507)
+||||+|.||+| +++|++++++||+.|+|++++
T Consensus 479 ~PfGG~k~SG~G~~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 479 QPFGGFKMSGTGSKAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred CCCCccccccCCCccCcHHHHHHhccEEEEEEeC
Confidence 899999999999 889999999999999998764
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. |
| >cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-100 Score=804.59 Aligned_cols=468 Identities=37% Similarity=0.592 Sum_probs=439.6
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-Hhh-cCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWS-QTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||.||+++++++.++.+|++.|+++|++||+ .|+ .++.++|.++|+++++.|+++++
T Consensus 7 ~~~~I~G~~~~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~ 86 (481)
T cd07143 7 TGLFINGEFVDSVHGGTVKVYNPSTGKLITKIAEATEADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLD 86 (481)
T ss_pred cCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999987643 289999999999999999999999999999999998 599 99999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..++ +.|+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+.+.++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 165 (481)
T cd07143 87 YLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETD-IKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKI 165 (481)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEecceeEEEECCCcChHHHHHHHH
Confidence 99999999999999665 46999999999999999887655443322 34567789999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +.++++.|+.||.+|.|+||||+.+|+.|++.
T Consensus 166 ~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~---~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 166 APALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGY---GRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCC---chhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999984 56788999999999999999999999999999
Q ss_pred hcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~G~p~ 321 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKK-LKVGDPF 321 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHHHHHHHh-cCCCCCC
Confidence 885 78999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++.+|+++++||..+.. .|+|+.|||+.++++++++++||+||||++|++|+|.
T Consensus 322 ~~~-~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 399 (481)
T cd07143 322 AED-TFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGN-EGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTE 399 (481)
T ss_pred CCC-CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCC-CceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCH
Confidence 999 99999999999999999999999999999999986532 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 400 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~i~~ 479 (481)
T cd07143 400 EEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGRELGEYALENYTQIKAVHI 479 (481)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCcccHHHHHHHHhCeEEEEE
Confidence 99999999999999999999999999999999999999999977667789999999999999999999999999999875
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 480 ~ 480 (481)
T cd07143 480 N 480 (481)
T ss_pred e
Confidence 3
|
NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. |
| >TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-100 Score=809.61 Aligned_cols=481 Identities=25% Similarity=0.336 Sum_probs=441.0
Q ss_pred hHHHHHhhhc----cCCcceeECCEeeeCCC-CccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHH
Q psy3132 17 HMKYLQKLCL----STYTQAYINGEWVHSSK-KFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90 (507)
Q Consensus 17 ~~~~~~~~~~----~~~~~~~I~G~~~~~~~-~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~ 90 (507)
+..|.+++.. ....++||||+|+.+.+ .++++||.| |+++++++.++.+|+++|+++|++||+.|+.++..+|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~~nP~t~g~~i~~~~~~~~~~v~~av~~A~~a~~~W~~~~~~~R~ 94 (533)
T TIGR01236 15 RDLLRAELKELKSHPIEIPLVIGGEEVMGSGERIDQVQPHNHQAVLAKATNATEEDAAKAVEAALDAKKDWSALPFYDRA 94 (533)
T ss_pred HHHHHHHHHHHhhcCeeeceeECCEEecCCCCEEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHH
Confidence 4444444444 34557899999997533 389999997 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-hcHHHHHHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecc-cEE
Q psy3132 91 IVLKRWLKELE-GNKQALAEIMTQESGKPPTESLGE-VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL-GVV 167 (507)
Q Consensus 91 ~~L~~~a~~l~-~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv 167 (507)
++|++++++|+ +++++|++++++|+|||..+++.| +..+++.+++++.+++++.+........+...++.++|+ |||
T Consensus 95 ~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~P~~GVv 174 (533)
T TIGR01236 95 AIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTDYRPLEGFV 174 (533)
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecCCCEE
Confidence 99999999999 599999999999999999999876 999999999999988877554321122345678899999 999
Q ss_pred EEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCcc
Q psy3132 168 GLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVA 247 (507)
Q Consensus 168 ~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~ 247 (507)
++|+|||||+....+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|+.||+++
T Consensus 175 ~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~---~~~~g~~Lv~~p~v~ 250 (533)
T TIGR01236 175 YAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGD---GFAVSDVVLADPRLA 250 (533)
T ss_pred EEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecC---cHHHHHHHhcCCCcC
Confidence 999999999999999999999 7999999999999999999999999999999999999974 567899999999999
Q ss_pred EEEEeCCHHHHHHHHHhhcccccc------cccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhh
Q psy3132 248 GISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321 (507)
Q Consensus 248 ~v~ftGs~~~g~~i~~~~~~~~~~------~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i 321 (507)
.|+||||+.+|+.|++.++++++| +++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++
T Consensus 251 ~V~FTGS~~~G~~i~~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i 330 (533)
T TIGR01236 251 GIHFTGSTATFKHLWKWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSV 330 (533)
T ss_pred EEEEECCHHHHHHHHHHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhH
Confidence 999999999999999999988874 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC--CeEEeCCCccccCCCceeeceEeecC
Q psy3132 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG--AKVILGGGKVTKLGSKFFAPTILTNI 399 (507)
Q Consensus 322 ~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~v~~gg~~~~~~~g~~~~Ptvl~~~ 399 (507)
||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++| +++++||..... .|+|++|||+.++
T Consensus 331 ~d~f~~~l~~~~~~-l~~G~p~d~~-t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~-~G~~~~PTvl~~~ 407 (533)
T TIGR01236 331 WPRFKDELLAELAE-VKVGDPDDFS-NFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDS-EGYFVEPTVILSK 407 (533)
T ss_pred HHHHHHHHHHHHhc-CCcCCCCCCC-CcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCC-CCeEEeeEEEecC
Confidence 99999999999999 9999999999 99999999999999999999999987 799999976432 5899999999999
Q ss_pred CCCCCCcccceeeccEEeEecCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCCC--CCC
Q psy3132 400 TPDMLCYTEEVFGPVAVCIKFKT--EEESLCVA-NNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIIS--HTE 472 (507)
Q Consensus 400 ~~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~~--~~~ 472 (507)
+++|++++||+||||++|++|+| ++|||+++ |+++|||++||||+|.+.+.+++++++ +|+|+||..... .+.
T Consensus 408 ~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~ 487 (533)
T TIGR01236 408 DPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQ 487 (533)
T ss_pred CCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCC
Confidence 99999999999999999999998 49999999 889999999999999999999999977 999999976553 367
Q ss_pred CcccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 473 AAFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 473 ~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
+||||+|.||+| +++|++++++||+.|+++..
T Consensus 488 ~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 520 (533)
T TIGR01236 488 QPFGGARGSGTNDKAGGPLNLLRWTSARSIKET 520 (533)
T ss_pred CCCCCcccccCCcccCCHHHHHHhcceEEEEEE
Confidence 899999999998 99999999999999998753
|
This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate. |
| >PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-100 Score=800.18 Aligned_cols=453 Identities=34% Similarity=0.539 Sum_probs=428.4
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||.||+++++++.++.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 3 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 82 (457)
T PRK09406 3 IATINPATGETVKTFTALTDDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA 82 (457)
T ss_pred eeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~ 202 (507)
|+..+++.++++++.+++..+..... .......+++++|+|||++|+|||||++++++++++||++||+||+|||+.+
T Consensus 83 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~ 162 (457)
T PRK09406 83 EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNV 162 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcC
Confidence 99999999999999887765432111 1123467889999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcE
Q psy3132 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282 (507)
Q Consensus 203 ~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 282 (507)
|.++.++.++|.++|+|+|++|+|++ +.+.+..|+.|++++.|+||||+.+|+.|++.+++++||+++|+|||||+
T Consensus 163 p~~~~~l~~l~~~aGlP~gvv~~v~~----g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~~~~~~~lElGG~~~~ 238 (457)
T PRK09406 163 PQTALYLADLFRRAGFPDGCFQTLLV----GSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGDEIKKTVLELGGSDPF 238 (457)
T ss_pred cHHHHHHHHHHHHhCCCcCcEEEEcC----CchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHhcCCceeeecCCCCee
Confidence 99999999999999999999999985 23467889999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHH
Q psy3132 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 283 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~ 362 (507)
||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++
T Consensus 239 iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~g~p~~~~-~~~Gpli~~~~~~~~ 316 (457)
T PRK09406 239 IVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAA-LRVGDPTDPD-TDVGPLATEQGRDEV 316 (457)
T ss_pred EECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHHHHHHHHHhh-CCCCCCCCCC-CCCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999 999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
.+++++++++|+++++||..++. +|+|++|||+.+++++|++++||+||||++|++|+|.+|||+++|+++|||++|||
T Consensus 317 ~~~i~~a~~~Ga~~l~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 395 (457)
T PRK09406 317 EKQVDDAVAAGATILCGGKRPDG-PGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAW 395 (457)
T ss_pred HHHHHHHHHCCCEEEeCCCcCCC-CCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999999986532 58999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|.++
T Consensus 396 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 457 (457)
T PRK09406 396 TRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGRELSAHGIREFCNIKTVWIG 457 (457)
T ss_pred cCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceEEEEeC
Confidence 99999999999999999999999877777899999999999999999999999999999763
|
|
| >cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-100 Score=804.85 Aligned_cols=465 Identities=35% Similarity=0.580 Sum_probs=434.1
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.+ .++++||.||+++++++.++.+|++.|+++|++||+.|++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 81 (479)
T cd07116 2 DNFIGGEWVAPVKGEYFDNITPVTGKVFCEVPRSTAEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLA 81 (479)
T ss_pred CceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 5799999987543 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 109 EIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
.+++.|+|||..+++ .|+..+++.++++++.++...+...+. ..+...+.+++|+|||++|+|||||+.+.++++++|
T Consensus 82 ~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 160 (479)
T cd07116 82 VAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEI-DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAPA 160 (479)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecC-CCCceEEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 999999999999997 599999999999998877665543221 234457889999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|+ +.+++..|+.||+++.|+||||+.+|+.|++.+++
T Consensus 161 LaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~ 236 (479)
T cd07116 161 LAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGF---GLEAGKPLASSKRIAKVAFTGETTTGRLIMQYASE 236 (479)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecC---chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHc
Confidence 99999999999999999999999999998 999999999974 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCC------CCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSN------ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~d------aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++||+++|+|||||+||++| ||++.|++.++++. +|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 237 ~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~G~ 314 (479)
T cd07116 237 NIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYDRFMERALERVKA-IKQGN 314 (479)
T ss_pred CCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCC
Confidence 99999999999999999987 79999999999865 599999999999999999999999999999999 99999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
|.+++ +.+||++++.+++++++++++++.+|+++++||..... .+|+|+.|||+.+++ ++++++||+||||++|+
T Consensus 315 p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~~~~~~eE~FGPVl~v~ 392 (479)
T cd07116 315 PLDTE-TMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-KMRIFQEEIFGPVLAVT 392 (479)
T ss_pred CCCCC-CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-CChhhhcCCcCceEEEE
Confidence 99999 99999999999999999999999999999999976421 258999999999874 99999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 419 KFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 419 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|+++|++||+.
T Consensus 393 ~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~ 472 (479)
T cd07116 393 TFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGRENHKMMLDHYQQT 472 (479)
T ss_pred EeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCccChHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999998766667899999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|.++
T Consensus 473 k~~~~~ 478 (479)
T cd07116 473 KNLLVS 478 (479)
T ss_pred EEEEEe
Confidence 999764
|
Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. |
| >cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-100 Score=803.89 Aligned_cols=472 Identities=39% Similarity=0.630 Sum_probs=441.0
Q ss_pred CcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH-hhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 29 YTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
..++||||+|..+.. .++++||+||+++++++.++.+|++.++++|++|++. |+.++.++|.++|+++++.|+++++
T Consensus 7 ~~~~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~ 86 (484)
T cd07144 7 PTGLFINNEFVKSSDGETIKTVNPSTGEVIASVYAAGEEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRD 86 (484)
T ss_pred CcCcEECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 346899999987643 2899999999999999999999999999999999996 8899999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..++ ..|+..+++.++++++++++..+...+. ..+...+..++|+|||++|+|||||+.++++++
T Consensus 87 ~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~ 165 (484)
T cd07144 87 LLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPT-SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKL 165 (484)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEEecceEEEEECcCCCHHHHHHHHH
Confidence 99999999999998765 5799999999999999888775544332 234456889999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|+.||++|.|.||||+.+|+.|++.
T Consensus 166 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~ 242 (484)
T cd07144 166 APALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGY---GAVAGSALAEHPDVDKIAFTGSTATGRLVMKA 242 (484)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecC---CchHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 56789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
++.++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|++.|++++.+.+++|+|.+
T Consensus 243 a~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 243 AAQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999984389999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
++ +++||++++.+++++.+++++++++|+++++||..... ..|+|++|||+.++++++++++||+||||++|++|+|
T Consensus 323 ~~-~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~ 401 (484)
T cd07144 323 DD-TVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKT 401 (484)
T ss_pred CC-CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCC
Confidence 99 99999999999999999999999999999999976431 2589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 402 ~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~ 481 (484)
T cd07144 402 YEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGRELGEYGLETYTQTKAVH 481 (484)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999987766778999999999999999999999999999998
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
+++
T Consensus 482 ~~~ 484 (484)
T cd07144 482 INL 484 (484)
T ss_pred EeC
Confidence 753
|
NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. |
| >cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-100 Score=803.99 Aligned_cols=467 Identities=39% Similarity=0.624 Sum_probs=440.1
Q ss_pred eECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 33 ~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
||||+|..+.. .++++||.||+++++++.++.+|++.++++|++||+ .|++++.++|.++|+++++.|++++++|+
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la 80 (482)
T cd07119 1 YIDGEWVEAASGKTRDIINPANGEVIATVPEGTAEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELA 80 (482)
T ss_pred CCCCEEecCCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 68999986532 389999999999999999999999999999999997 59999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++++++.+++..+...+. ..+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 81 ~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 159 (482)
T cd07119 81 RLETLNTGKTLRESEIDIDDVANCFRYYAGLATKETGEVYDV-PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLAPAL 159 (482)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887765543322 2355678999999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|.++.++.++|.++|+|+|++|+|+++ +.+.++.|++||.+++|.||||+.+|+.|++.++++
T Consensus 160 aaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~---~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~ 236 (482)
T cd07119 160 AAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGS---GATVGAELAESPDVDLVSFTGGTATGRSIMRAAAGN 236 (482)
T ss_pred hcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecC---cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999974 556899999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||+++||+|+++|++++.+ +++|+|.+++ +
T Consensus 237 ~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~G~~~~~~-~ 314 (482)
T cd07119 237 VKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKK-IKLGNGLDAD-T 314 (482)
T ss_pred CCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
++||++++.+++++.+++++++++|+++++||..... ..|+|++|||+.++++++++++||+||||++|++|+|+||
T Consensus 315 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~de 394 (482)
T cd07119 315 EMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDTEEE 394 (482)
T ss_pred cCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCCHHH
Confidence 9999999999999999999999999999999975421 2489999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 395 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~~~ 474 (482)
T cd07119 395 AIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGRELGPTGLEEYQETKHININL 474 (482)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceEEEEEec
Confidence 99999999999999999999999999999999999999987666678999999999999999999999999999998764
|
Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. |
| >cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=801.45 Aligned_cols=467 Identities=39% Similarity=0.641 Sum_probs=439.1
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhh--cCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS--QTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~--~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|++.++++|++|++.|+ +++.++|.++|+++++.|+++++
T Consensus 4 ~~~~I~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 83 (476)
T cd07091 4 TGLFINNEFVDSVSGKTFPTINPATEEVICQVAEADEEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRD 83 (476)
T ss_pred ccceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 47899999986432 399999999999999999999999999999999999855 99999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..++ ..|+..+++.++++++++++..+...+.. .+...+.+++|+|||++|+|||||+.++++++
T Consensus 84 ~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 84 ELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPID-GNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 99999999999998665 46999999999999998877665543322 35567889999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+++ +.++++.|+.|+++|.|+||||+.+|+.|++.
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~---~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~~ 239 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGF---GPTAGAAISSHMDVDKIAFTGSTAVGRTIMEA 239 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCC---ChhHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 56788999999999999999999999999999
Q ss_pred hcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++. +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.+ +++|+|.
T Consensus 240 aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L~~~~~~-~~~g~p~ 318 (476)
T cd07091 240 AAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEK-RVVGDPF 318 (476)
T ss_pred HHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHHHHHHhh-CCCCCCC
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++.+|+++++||..+.. .|+|++|||+.++++++++++||+||||++|++|+|+
T Consensus 319 ~~~-~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~-~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 396 (476)
T cd07091 319 DPD-TFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGS-KGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTE 396 (476)
T ss_pred CCC-CcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCC-CCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCH
Confidence 999 99999999999999999999999999999999986542 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
+|||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 397 ~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 476 (476)
T cd07091 397 DEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGRELGEEGLEEYTQVKAVTI 476 (476)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCccchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999999999877667789999999999999999999999999999864
|
ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co |
| >PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-99 Score=800.37 Aligned_cols=472 Identities=35% Similarity=0.633 Sum_probs=441.4
Q ss_pred hhccCCcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHH
Q psy3132 24 LCLSTYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKE 99 (507)
Q Consensus 24 ~~~~~~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~ 99 (507)
+......++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+ .|+.+|.++|+++|+++++.
T Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~v~~~~~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~ 93 (494)
T PRK09847 14 LSLAIENRLFINGEYTAAAENETFETVDPVTQAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADL 93 (494)
T ss_pred hcCccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHH
Confidence 44445667899999986532 389999999999999999999999999999999997 69999999999999999999
Q ss_pred HHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHH
Q psy3132 100 LEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMA 178 (507)
Q Consensus 100 l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 178 (507)
|++++++|++++++|+|||..++. .|+..+++.++++++.+++..+...+.. .+...+++++|+|||++|+|||||+.
T Consensus 94 l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~ 172 (494)
T PRK09847 94 MEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTS-SHELAMIVREPVGVIAAIVPWNFPLL 172 (494)
T ss_pred HHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC-CCceeEEEecceeEEEEECCCccHHH
Confidence 999999999999999999999875 5999999999999998887766543322 34456889999999999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g 258 (507)
++++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+|+|+ +.+.++.|+.|+++|.|+||||+.+|
T Consensus 173 ~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~---~~~~~~~L~~~~~vd~v~fTGs~~~g 249 (494)
T PRK09847 173 LTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGF---GHEAGQALSRHNDIDAIAFTGSTRTG 249 (494)
T ss_pred HHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCC---ChhHHHHHhcCCCCCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999999999999985 56788999999999999999999999
Q ss_pred HHHHHhhc-ccccccccccCCCCcEEEcCCC-CHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhc
Q psy3132 259 KILYSHCS-QGIKRLSLELGGNAPFIVYSNA-NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336 (507)
Q Consensus 259 ~~i~~~~~-~~~~~~~lelgG~~~~iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 336 (507)
+.|.+.++ .+++|+++|+|||||+||++|+ |++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 250 ~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~- 328 (494)
T PRK09847 250 KQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQN- 328 (494)
T ss_pred HHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh-
Confidence 99999988 5899999999999999999997 99999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEE
Q psy3132 337 FIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAV 416 (507)
Q Consensus 337 ~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~ 416 (507)
+++|+|.+++ +.+||++++.+++++.+++++++++| ++++||.... .+.|+.|||+.++++++++++||+||||++
T Consensus 329 ~~~g~p~~~~-~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~~--~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~ 404 (494)
T PRK09847 329 WQPGHPLDPA-TTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNAG--LAAAIGPTIFVDVDPNASLSREEIFGPVLV 404 (494)
T ss_pred cCCCCCCCCC-CcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccCC--CCceEeeEEEeCCCCCChHHhCcCcCceEE
Confidence 9999999999 99999999999999999999999999 9999997642 478999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhch
Q psy3132 417 CIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFT 496 (507)
Q Consensus 417 v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t 496 (507)
|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||
T Consensus 405 v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft 484 (494)
T PRK09847 405 VTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFT 484 (494)
T ss_pred EEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCccchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999997766778999999999999999999999999
Q ss_pred hceEEEec
Q psy3132 497 QIKYMCFG 504 (507)
Q Consensus 497 ~~k~v~~~ 504 (507)
+.|+|++.
T Consensus 485 ~~k~v~~~ 492 (494)
T PRK09847 485 ELKTIWIS 492 (494)
T ss_pred ceEEEEEe
Confidence 99999764
|
|
| >TIGR01780 SSADH succinate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-99 Score=795.56 Aligned_cols=448 Identities=54% Similarity=0.936 Sum_probs=425.5
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||+||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (448)
T TIGR01780 1 VYNPATGEIIGTVPDQGVEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKGEI 80 (448)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.+++++..+++..+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~ 160 (448)
T TIGR01780 81 LYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSA 160 (448)
T ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHH
Confidence 99999999999888777665443333455667889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..++++|.++|+|+|++|+|+++ .+.+.++.|++||++++|+||||+.+|+.|++.++.++||+++|+|||||+||++
T Consensus 161 ~~l~~~~~~aGlP~gvv~~v~g~--~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa~~~~~~~lElGGk~~~iV~~ 238 (448)
T TIGR01780 161 LALARLAEQAGIPKGVLNVITGS--RAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSASTVKKVSMELGGNAPFIVFD 238 (448)
T ss_pred HHHHHHHHHcCCCccceEEEeCC--CchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEECC
Confidence 99999999999999999999973 1357889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.++|
T Consensus 239 dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~G~p~~~~-~~~gpli~~~~~~~v~~~i 316 (448)
T TIGR01780 239 DADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKK-LKVGNGLDEG-VTQGPLINEKAVEKVEKHI 316 (448)
T ss_pred CCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHHHHHHHHHh-cCCCCCCCCC-CCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred HHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCH
Q psy3132 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 446 (507)
++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus 317 ~~a~~~Ga~il~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~ 395 (448)
T TIGR01780 317 ADAVEKGAKVVTGGKRHEL-GGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDL 395 (448)
T ss_pred HHHHHCCCEEEeCCCcCCC-CCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCH
Confidence 9999999999999976532 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 396 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k 448 (448)
T TIGR01780 396 ATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGREGSKYGIEEYLETK 448 (448)
T ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhccC
Confidence 99999999999999999998766677899999999999999999999999976
|
SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070). |
| >cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-99 Score=799.89 Aligned_cols=466 Identities=38% Similarity=0.660 Sum_probs=440.0
Q ss_pred eECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 33 YINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 33 ~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
||||+|+... ..++++||.||+++++++.++.+|++.++++|++|++.|++++.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 80 (468)
T cd07088 1 YINGEFVPSSSGETIDVLNPATGEVVATVPAATAEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKL 80 (468)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6899998643 33899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhc
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 190 (507)
+++|+|||..+++.|+..+++.+++++.++++..+...+....+...+.+++|+|||++|+|||||+.+.++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~a 160 (468)
T cd07088 81 IVEEQGKTLSLARVEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAPALVT 160 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEecceeEEEEccCchHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999998887766544332235567889999999999999999999999999999999
Q ss_pred CCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccc
Q psy3132 191 GCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270 (507)
Q Consensus 191 GN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 270 (507)
||+||+|||+.+|.++..+.++|.++|+|+|++|+++++ +.++++.|+.|+++|.|.||||+.+|+.|.+.+++++|
T Consensus 161 GN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~ 237 (468)
T cd07088 161 GNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGR---GSVVGDALVAHPKVGMISLTGSTEAGQKIMEAAAENIT 237 (468)
T ss_pred CCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999974 55688999999999999999999999999999999999
Q ss_pred ccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCcc
Q psy3132 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNL 350 (507)
Q Consensus 271 ~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~ 350 (507)
|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +.+
T Consensus 238 ~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~ 315 (468)
T cd07088 238 KVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKA-VKVGDPFDAA-TDM 315 (468)
T ss_pred cEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-Ccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999998 999
Q ss_pred CccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHH
Q psy3132 351 GPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVA 430 (507)
Q Consensus 351 gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~ 430 (507)
||++++.+++++.+++++++.+|+++++||..+....|+|++|||+.++++++++++||+||||++|++|+|+||||+++
T Consensus 316 gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~ 395 (468)
T cd07088 316 GPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELA 395 (468)
T ss_pred CcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHHHHHH
Confidence 99999999999999999999999999999976532258999999999999999999999999999999999999999999
Q ss_pred hcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 431 NNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 431 n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|+++|||++||||+|.+.++++++++++|+|+||++.......||||+|.||+|+++|++++++||+.|+|.+
T Consensus 396 n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~~~g~~~l~~~t~~k~v~~ 468 (468)
T cd07088 396 NDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGGADGKHGLEEYLQTKVVYL 468 (468)
T ss_pred hCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 9999999999999999999999999999999999887655667999999999999999999999999999863
|
Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. |
| >PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-99 Score=802.52 Aligned_cols=490 Identities=29% Similarity=0.456 Sum_probs=450.7
Q ss_pred cCcccchHHhhHHHHHhhhc-----cCCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 7 LGYSVTVKQMHMKYLQKLCL-----STYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~-----~~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
..+|......++.+.+.+.. +...++||||+|+.+...++++||+ ||+++++++.++.+|++.++++|++|++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~P~~t~~~i~~~~~a~~~~v~~av~~A~~A~~~ 88 (514)
T PRK03137 9 PFTDFSVEENVEAFEEALKKVEKELGQDYPLIIGGERITTEDKIVSINPANKSEVVGRVSKATKELAEKAMQAALEAFET 88 (514)
T ss_pred cccccCchHhHHHHHHHHHHHHhhcccccceeECCEEecCCCeeEeECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 34555556667777766666 3355789999999876569999999 69999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC-ccccCCCCCceeEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG-ELVPSPVKSKELLM 159 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~ 159 (507)
|++++.++|+++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++|+..+++... .... ...+...++
T Consensus 89 W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~g~~~~~ 167 (514)
T PRK03137 89 WKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADADTAEAIDFLEYYARQMLKLADGKPVE-SRPGEHNRY 167 (514)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCceEEE
Confidence 99999999999999999999999999999999999999999999999999999999998877642 2222 124556789
Q ss_pred EeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHh
Q psy3132 160 VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKL 239 (507)
Q Consensus 160 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~ 239 (507)
+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|+ +.++++.
T Consensus 168 ~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~---~~~~~~~ 244 (514)
T PRK03137 168 FYIPLGVGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGS---GSEVGDY 244 (514)
T ss_pred EEecCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecC---chHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999984 5678999
Q ss_pred hhcCCCccEEEEeCCHHHHHHHHHhhcc------cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCc
Q psy3132 240 LCTSPHVAGISFTGSTQVGKILYSHCSQ------GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN 313 (507)
Q Consensus 240 L~~~~~v~~v~ftGs~~~g~~i~~~~~~------~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~ 313 (507)
|++||+++.|+||||+.+|+.|++.++. ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 245 L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~ 324 (514)
T PRK03137 245 LVDHPKTRFITFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACS 324 (514)
T ss_pred HhcCCCcCEEEEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCe
Confidence 9999999999999999999999999886 7899999999999999999999999999999999999999999999
Q ss_pred ceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeec
Q psy3132 314 RFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAP 393 (507)
Q Consensus 314 ~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~P 393 (507)
|||||+++||+|+++|++++++ +++|+|.+++ ++||++++.+++++.+++++++++ +++++||..+.. .|+|++|
T Consensus 325 rv~V~~~v~d~f~~~l~~~~~~-l~~g~p~~~~--~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~-~g~~~~P 399 (514)
T PRK03137 325 RAIVHEDVYDEVLEKVVELTKE-LTVGNPEDNA--YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDS-KGYFIQP 399 (514)
T ss_pred EEEEeHHHHHHHHHHHHHHHHh-CCCCCCCCcc--CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCC-CceEEee
Confidence 9999999999999999999999 9999999874 899999999999999999999887 699999976432 5899999
Q ss_pred eEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CC
Q psy3132 394 TILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HT 471 (507)
Q Consensus 394 tvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~ 471 (507)
||+.++++++++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+
T Consensus 400 tvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~ 479 (514)
T PRK03137 400 TIFADVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVG 479 (514)
T ss_pred EEEeCCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987543 35
Q ss_pred CCcccCCCCCCCC-CCchHHHHHhchhceEEEecc
Q psy3132 472 EAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 472 ~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 505 (507)
.+||||+|.||+| +++|.+++++||+.|+|...+
T Consensus 480 ~~PfGG~k~SG~G~~~gg~~~l~~ft~~k~v~~~~ 514 (514)
T PRK03137 480 YHPFGGFNMSGTDSKAGGPDYLLLFLQAKTVSEMF 514 (514)
T ss_pred CCCCCCcccccCCcccCCHHHHHHhceEEEEEEeC
Confidence 6899999999999 689999999999999987653
|
|
| >TIGR01804 BADH glycine betaine aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-99 Score=797.80 Aligned_cols=461 Identities=37% Similarity=0.631 Sum_probs=435.0
Q ss_pred eECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 33 YINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 33 ~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
||||+|+.+.. .++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|+++
T Consensus 1 ~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~ 80 (467)
T TIGR01804 1 FIDGEWVEASAGETREIINPANQEVIATVAEATREDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKL 80 (467)
T ss_pred CCCCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 69999986532 3999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhh
Q psy3132 111 MTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALA 189 (507)
Q Consensus 111 ~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALa 189 (507)
+++|+|||..++ ..|+..+++.++++++.+++..+...+... ....+..++|+|||++|+|||||+...++++++||+
T Consensus 81 ~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~-~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALa 159 (467)
T TIGR01804 81 ETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPI-PSFSYTIREPLGVCVGIGAWNYPLQIASWKIAPALA 159 (467)
T ss_pred HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHh
Confidence 999999999999 679999999999999988876554333222 245688999999999999999999999999999999
Q ss_pred cCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 190 AGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 190 aGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
+||+||+|||+.+|.++..++++|.++|+|+|++|+|+++ +.++++.|+.|+.+|+|+||||+.+|+.|++.+++++
T Consensus 160 aGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~l 236 (467)
T TIGR01804 160 AGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGK---GAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAAADHL 236 (467)
T ss_pred cCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCC---cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999974 5678999999999999999999999999999999999
Q ss_pred cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCc
Q psy3132 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCN 349 (507)
Q Consensus 270 ~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~ 349 (507)
||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ ++
T Consensus 237 ~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~ 314 (467)
T TIGR01804 237 KHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARLVERTKR-IKLGDGFDEA-TE 314 (467)
T ss_pred CcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-Cc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9999999999 99
Q ss_pred cCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 350 LGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 350 ~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+||++++.+++++.+++++++.+|+++++||..... .+|+|+.|||+.++++++++++||+||||++|++|+|.|||
T Consensus 315 ~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 394 (467)
T TIGR01804 315 MGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSEDEV 394 (467)
T ss_pred cCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCHHHH
Confidence 999999999999999999999999999999975432 24899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 395 i~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 395 IARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGRENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCCCChHHHHHHHhccC
Confidence 9999999999999999999999999999999999999987766677899999999999999999999999976
|
Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171). |
| >cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-99 Score=796.26 Aligned_cols=460 Identities=39% Similarity=0.642 Sum_probs=433.9
Q ss_pred CEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Q psy3132 36 GEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQ 113 (507)
Q Consensus 36 G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~ 113 (507)
|+|+.+.. .++++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|++++++|++++++|++++++
T Consensus 1 g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~ 80 (465)
T cd07151 1 GEWRDGTSERTIDVLNPYTGETLAEIPAASKEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIR 80 (465)
T ss_pred CCceeCCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56776532 2899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCe
Q psy3132 114 ESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCT 193 (507)
Q Consensus 114 e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~ 193 (507)
|+|||..++..|+..+++.+++++..+.+..+...+....+...+++++|+|||++|+|||||+.+.++++++||++||+
T Consensus 81 e~Gk~~~~a~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~ 160 (465)
T cd07151 81 ESGSTRIKANIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPALALGNA 160 (465)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999988877655444332345567889999999999999999999999999999999999
Q ss_pred EEeccCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccccc
Q psy3132 194 CVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRL 272 (507)
Q Consensus 194 Vvlkps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~ 272 (507)
||+|||+.+|.++ .++.+++.++|+|+|++|+|+|+ +.++++.|+.||.++.|.||||+.+|+.|++.+++++||+
T Consensus 161 Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~ 237 (465)
T cd07151 161 VVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGA---GSEIGDAFVEHPVPRLISFTGSTPVGRHIGELAGRHLKKV 237 (465)
T ss_pred EEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecC---chhhHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcE
Confidence 9999999999996 68999999999999999999974 5678899999999999999999999999999999999999
Q ss_pred ccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCc
Q psy3132 273 SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352 (507)
Q Consensus 273 ~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gp 352 (507)
++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||
T Consensus 238 ~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gp 315 (465)
T cd07151 238 ALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKA-LPYGDPSDPD-TVVGP 315 (465)
T ss_pred EEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCcCC
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999998 99999
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc
Q psy3132 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432 (507)
Q Consensus 353 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 432 (507)
++++.+++++.+++++++++|+++++||.. +|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+
T Consensus 316 li~~~~~~~v~~~v~~a~~~ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~ 391 (465)
T cd07151 316 LINESQVDGLLDKIEQAVEEGATLLVGGEA----EGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELAND 391 (465)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEecCCc----CCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhC
Confidence 999999999999999999999999999964 4899999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 433 SNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 433 ~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|||++||||+|.+.++++++++++|+|+||+++.. .+.+||||+|.||+|+++|+++|++||+.|+|++.
T Consensus 392 ~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 392 TEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGRFNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred CCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCcCChHHHHHHhhceEEEEec
Confidence 9999999999999999999999999999999987664 46799999999999999999999999999998763
|
NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. |
| >cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-99 Score=797.74 Aligned_cols=468 Identities=39% Similarity=0.668 Sum_probs=440.0
Q ss_pred eeECCEeeeCC--CCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 32 AYINGEWVHSS--KKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 32 ~~I~G~~~~~~--~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
+||||+|+.+. ..++++||+| ++++++++.++.+|++.++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela 80 (478)
T cd07131 1 NYIGGEWVDSASGETFDSRNPADLEEVVGTFPLSTASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELA 80 (478)
T ss_pred CcCCCEeecCCCCCeEEEECCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999998653 3399999999 68999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.+++++..++...+...+....+...+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~~e~Gk~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 160 (478)
T cd07131 81 RLVTREMGKPLAEGRGDVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFPAL 160 (478)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776654433222344678999999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++..+.++|.++|+|+|++|+++++ +.++++.|+.||++|.|+||||+.+|+.|.+.++++
T Consensus 161 aaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~aa~~ 237 (478)
T cd07131 161 VCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGR---GEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARP 237 (478)
T ss_pred HcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999974 556899999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|++|+++|++++.+ +++|+|.+++ +
T Consensus 238 ~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~ 315 (478)
T cd07131 238 NKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKR-LRVGDGLDEE-T 315 (478)
T ss_pred CCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHHHHHHHHh-cCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
++||++++.+++++.+++++|+++|+++++||..... .+|+|++|||+.+++++++++++|+||||++|++|+|+||
T Consensus 316 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~~e 395 (478)
T cd07131 316 DMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSLEE 395 (478)
T ss_pred cCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999999976421 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC-CCchHHHHHhchhceEEEe
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~ 503 (507)
||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+|++
T Consensus 396 ai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~g~~~~~~f~~~k~i~~ 475 (478)
T cd07131 396 AIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGHREAGTTALDAFTEWKAVYV 475 (478)
T ss_pred HHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCCcCCcHHHHHHhhheEEEEE
Confidence 99999999999999999999999999999999999999987664 468999999999999 8889999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 476 ~ 476 (478)
T cd07131 476 D 476 (478)
T ss_pred e
Confidence 5
|
Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. |
| >TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-98 Score=792.41 Aligned_cols=468 Identities=30% Similarity=0.462 Sum_probs=438.2
Q ss_pred ceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+.. .++++||.||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 81 (477)
T TIGR01722 2 NHWIGGKFAEGASGTYIPVTNPATNEVTTKVAFASVDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIA 81 (477)
T ss_pred ceeECCEEecCCCCCeEeeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5799999986532 38999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
++++.|+|||..+++.|+..+++.+++++..+....+...+....+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 82 ~~~~~e~Gk~~~~a~~ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 161 (477)
T TIGR01722 82 ELITAEHGKTHSDALGDVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFPIAI 161 (477)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccceEEEEccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888776665433222345667899999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+| +.+.++.|+.||+|+.|+||||+.+|+.|.+.++.+
T Consensus 162 aaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g----~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a~~~ 237 (477)
T TIGR01722 162 ACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHG----DKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTGSAH 237 (477)
T ss_pred hcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeC----CHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999997 346788999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|++++++ +++|+|.+++ +
T Consensus 238 ~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l~~~~~~-~~~G~~~~~~-~ 314 (477)
T TIGR01722 238 GKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEIRERAEK-IRIGPGDDPG-A 314 (477)
T ss_pred CCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHHHHHHhc-CCCCCCCCCC-C
Confidence 99999999999999999999999999999999999999999999999999999 9999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
++||++++.+++++.+++++|+++|+++++||..... .+|+|++|||+.++++++.++++|+||||++|++|+|++|
T Consensus 315 ~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~~e 394 (477)
T TIGR01722 315 EMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEE 394 (477)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCHHH
Confidence 9999999999999999999999999999999975311 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC--CCchHHHHHhchhceEEE
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG--REGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g--~~~g~~~l~~~t~~k~v~ 502 (507)
||+++|+++|||++||||+|.+.++++++++++|.|+||++... .+.+||||+|.||+| +++|++++++||+.|+|+
T Consensus 395 ai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~~~g~~~l~~~~~~k~i~ 474 (477)
T TIGR01722 395 AIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGDHHIYGKQGTHFYTRGKTVT 474 (477)
T ss_pred HHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCCCccChHHHHHHhcCeeEEE
Confidence 99999999999999999999999999999999999999986543 367899999999999 578999999999999998
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
++|
T Consensus 475 ~~~ 477 (477)
T TIGR01722 475 TRW 477 (477)
T ss_pred EeC
Confidence 864
|
In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus. |
| >cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-98 Score=793.42 Aligned_cols=470 Identities=29% Similarity=0.478 Sum_probs=440.5
Q ss_pred cCCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 27 STYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
+...++||+|+|+.+...++++||. ||+++++++.++.+|+++++++|++|++.|+.+|.++|.++|+++++.|+++++
T Consensus 16 ~~~~~~~i~g~~~~~~~~~~~~~P~~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 95 (500)
T cd07083 16 GRAYPLVIGGEWVDTKERMVSVSPFAPSEVVGTTAKADKAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRR 95 (500)
T ss_pred cccccceECCEEecCCCceEeeCCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHH
Confidence 4566789999999876568999997 699999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++.|+..+++.++++++.+.+..+.... ....+...+++++|+|||++|+|||||+.+.++++
T Consensus 96 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~ 175 (500)
T cd07083 96 ELIATLTYEVGKNWVEAIDDVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMI 175 (500)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccceEEEEcCCccHHHHHHHHH
Confidence 99999999999999999999999999999999998877554221 11235567889999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|.+.
T Consensus 176 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~ 252 (500)
T cd07083 176 VAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGV---GEEVGAYLTEHERIRGINFTGSLETGKKIYEA 252 (500)
T ss_pred HHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCC---CchhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999984 56789999999999999999999999999999
Q ss_pred hcccc------cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccc
Q psy3132 265 CSQGI------KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFI 338 (507)
Q Consensus 265 ~~~~~------~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 338 (507)
+++++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ ++
T Consensus 253 aa~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~ 331 (500)
T cd07083 253 AARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAYEPVLERLLKRAER-LS 331 (500)
T ss_pred HhhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHc-CC
Confidence 98876 999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 339 QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 339 ~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
+|+|.+++ +++||++++.+++++.+++++++++| ++++||..+.. .|+|+.|||+.++++++++++||+||||++|+
T Consensus 332 ~G~p~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~ 408 (500)
T cd07083 332 VGPPEENG-TDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEG-EGYFVAPTVVEEVPPKARIAQEEIFGPVLSVI 408 (500)
T ss_pred CCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCC-CCeEEccEEEeCCCCCChHhhCCCCCceEEEE
Confidence 99999999 99999999999999999999999887 99999976543 58999999999999999999999999999999
Q ss_pred ecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCC--CCCcccCCCCCCCC-CCchHHHHH
Q psy3132 419 KFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH--TEAAFGGVKESGLG-REGSRHGME 493 (507)
Q Consensus 419 ~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~pfGG~~~SG~g-~~~g~~~l~ 493 (507)
+|+ |+||||+++|+++|||++||||+|.+.+.++++++++|+|+||+..... +.+||||+|.||+| +++|+++++
T Consensus 409 ~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~ 488 (500)
T cd07083 409 RYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNAKTGGPHYLR 488 (500)
T ss_pred EeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCCcccCHHHHH
Confidence 999 9999999999999999999999999999999999999999999876533 56899999999999 689999999
Q ss_pred hchhceEEEe
Q psy3132 494 EFTQIKYMCF 503 (507)
Q Consensus 494 ~~t~~k~v~~ 503 (507)
+||+.|+++.
T Consensus 489 ~~~~~k~~~~ 498 (500)
T cd07083 489 RFLEMKAVAE 498 (500)
T ss_pred HhhheeEEEE
Confidence 9999999875
|
ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. |
| >PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-98 Score=792.54 Aligned_cols=472 Identities=31% Similarity=0.516 Sum_probs=436.1
Q ss_pred HHHhhhccCCcceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHH
Q psy3132 20 YLQKLCLSTYTQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWL 97 (507)
Q Consensus 20 ~~~~~~~~~~~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a 97 (507)
+.+++..+...++||||+|+.+.. .++++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|++++
T Consensus 6 ~~~~~~~~~~~~~~i~G~~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a 85 (496)
T PLN00412 6 FFAEILDGDVYKYYADGEWRTSSSGKSVAITNPSTRKTQYKVQACTQEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAA 85 (496)
T ss_pred HHHHHhcccccCceECCEEecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 344444456778999999986532 399999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCc--cccC-----CCCCceeEEEeecccEEEEE
Q psy3132 98 KELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE--LVPS-----PVKSKELLMVREPLGVVGLI 170 (507)
Q Consensus 98 ~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~P~Gvv~~i 170 (507)
+.|++++++|++++++|+|||..+++.|+..+++.+++++..+.+.... .... ...+...+++++|+|||++|
T Consensus 86 ~~l~~~~~el~~~~~~e~Gk~~~~a~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I 165 (496)
T PLN00412 86 AILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAI 165 (496)
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEE
Confidence 9999999999999999999999999999999999999998877665322 1111 01123457889999999999
Q ss_pred cCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEE
Q psy3132 171 TPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGIS 250 (507)
Q Consensus 171 ~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ 250 (507)
+|||||+.++++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++++ +.+.++.|..||+++.|.
T Consensus 166 ~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~---~~~~~~~l~~~~~v~~V~ 242 (496)
T PLN00412 166 PPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGK---GSEIGDFLTMHPGVNCIS 242 (496)
T ss_pred CCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecC---chHHHHHHhcCCCcCEEE
Confidence 99999999999999999999999999999999999999999999999999999999974 567899999999999999
Q ss_pred EeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHH
Q psy3132 251 FTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330 (507)
Q Consensus 251 ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 330 (507)
|||| .+|+.|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 243 ftGs-~~g~~v~~~a~--~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~ 319 (496)
T PLN00412 243 FTGG-DTGIAISKKAG--MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVN 319 (496)
T ss_pred EeCh-HHHHHHHHHhC--CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHHHHHHHHHH
Confidence 9999 99999999885 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccce
Q psy3132 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEV 410 (507)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~ 410 (507)
+++++ +++|+|.+ + +++||++++.+++++.+++++++.+|+++++||.. .|+|+.|||+.++++++++++||+
T Consensus 320 ~~~~~-~~~g~p~~-~-~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~----~g~~~~Ptvl~~v~~~~~i~~eE~ 392 (496)
T PLN00412 320 AKVAK-LTVGPPED-D-CDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR----EGNLIWPLLLDNVRPDMRIAWEEP 392 (496)
T ss_pred HHHHh-CccCCCcc-c-CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCeEEecEEEeCCCCCCHHHhCcC
Confidence 99999 99999977 6 89999999999999999999999999999997753 489999999999999999999999
Q ss_pred eeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchH
Q psy3132 411 FGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSR 489 (507)
Q Consensus 411 fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~ 489 (507)
||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||+|.||+|+++|+
T Consensus 393 FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~~~g~ 472 (496)
T PLN00412 393 FGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGIT 472 (496)
T ss_pred CCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCCCChH
Confidence 9999999999999999999999999999999999999999999999999999998764 345799999999999999999
Q ss_pred HHHHhchhceEEEec
Q psy3132 490 HGMEEFTQIKYMCFG 504 (507)
Q Consensus 490 ~~l~~~t~~k~v~~~ 504 (507)
+|+++||+.|+|+++
T Consensus 473 ~~~~~ft~~k~i~~~ 487 (496)
T PLN00412 473 NSINMMTKVKSTVIN 487 (496)
T ss_pred HHHHHhcceEEEEEe
Confidence 999999999999875
|
|
| >cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-98 Score=792.07 Aligned_cols=460 Identities=38% Similarity=0.635 Sum_probs=433.3
Q ss_pred eeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 32 AYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 32 ~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
+||||+|+.+.. .++++||.||+++++++.++.+|+++++++|++|++.|+++|.++|.++|+++++.|++++++|++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 80 (466)
T cd07138 1 FYIDGAWVAPAGTETIDVINPATEEVIGTVPLGTAADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQ 80 (466)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 589999997643 289999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 110 IMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
++++|+|||..+++ .|+..+++.++++++.++.+..... ....+.+++|+|||++|+|||||+.++++++++||
T Consensus 81 ~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 155 (466)
T cd07138 81 AITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEER-----RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPAL 155 (466)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccccc-----CceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 99999999999986 5899999999999988776544221 23467789999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++.++.++|.++|+|+|++|+++++ +.++++.|+.||+++.|+||||+.+|+.|.+.++.+
T Consensus 156 aaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 232 (466)
T cd07138 156 AAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGD---GPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAADT 232 (466)
T ss_pred hcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCC---chhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999974 567899999999999999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +
T Consensus 233 ~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~ 310 (466)
T cd07138 233 VKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEA-YVVGDPRDPA-T 310 (466)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHHHHHHHh-cCCCCCCCCC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
++||++++.+++++.+++++++++|+++++||..... ..|+|++|||+.++++++++++||+||||++|++|+|.|||
T Consensus 311 ~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~ea 390 (466)
T cd07138 311 TLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDEA 390 (466)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHHH
Confidence 9999999999999999999999999999999964321 25899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|+++|+++|||+++|||+|.+.++++++++++|+|+||+.. ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 391 i~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~ 465 (466)
T cd07138 391 IAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGREWGRYGLEEFLEVKSIQ 465 (466)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCccchHHHHHHhcceeEEe
Confidence 99999999999999999999999999999999999999853 4667899999999999999999999999999874
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. |
| >TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-98 Score=789.71 Aligned_cols=461 Identities=34% Similarity=0.545 Sum_probs=430.6
Q ss_pred ceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
.+||||+|+.++..++++||+||+++++++.++.+|+++|+++|++|+ +.++..+|+++|++++++|++++++|+++
T Consensus 5 ~~~i~g~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~ 81 (472)
T TIGR03250 5 ALRIAGEKVSRDRVIEVRYPYNGTVVGTVPKASVDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDL 81 (472)
T ss_pred CceECCEEecCCCeEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 679999999765459999999999999999999999999999998875 57899999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccC----CCCCceeEEEeecc-cEEEEEcCCcccHHhHHhhHH
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS----PVKSKELLMVREPL-GVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
+++|+|||..+++.|+..+++.+++++..+.+..+..... ...+...+..++|+ |||++|+|||||+.+++++++
T Consensus 82 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~~ 161 (472)
T TIGR03250 82 ITLESGLSKKDSLYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKIA 161 (472)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHHH
Confidence 9999999999999999999999999999887665533211 11234568899998 999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|+ +.+.++.|++||+++.|.||||+.+|+.|++.+
T Consensus 162 ~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 238 (472)
T TIGR03250 162 PAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGD---PREIADELITNPHVDLVTFTGGVAIGKYIAARA 238 (472)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999974 567899999999999999999999999999987
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
+ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.++
T Consensus 239 ~--~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~G~p~~~ 315 (472)
T TIGR03250 239 G--YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRFTELLVEKTRA-WRYGDPMDP 315 (472)
T ss_pred c--CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHHHHHHHHHHHHHHh-cCCCCCCCC
Confidence 5 7899999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+ +++||++++.+++++++++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|.+|
T Consensus 316 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~----~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~e 390 (472)
T TIGR03250 316 S-VDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR----DGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDD 390 (472)
T ss_pred C-CcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc----CCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHH
Confidence 9 99999999999999999999999999999999964 489999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCC-CCCcccCCCCCCCC-CCchHHHHHhchhceEEEe
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH-TEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~ 503 (507)
|++++|+++|||++||||+|.+.+.++++++++|+|+||+..... +.+||||+|.||+| +++|++++++||+.|+|++
T Consensus 391 ai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~l~~ft~~k~i~~ 470 (472)
T TIGR03250 391 AIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGYKEGVQEAMKSFTNLKTYSL 470 (472)
T ss_pred HHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCCCCChHHHHHHhhceEEEEE
Confidence 999999999999999999999999999999999999999876533 55899999999999 5678999999999999987
Q ss_pred cc
Q psy3132 504 GN 505 (507)
Q Consensus 504 ~~ 505 (507)
+|
T Consensus 471 ~~ 472 (472)
T TIGR03250 471 PW 472 (472)
T ss_pred eC
Confidence 65
|
It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. |
| >cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-98 Score=793.51 Aligned_cols=465 Identities=36% Similarity=0.629 Sum_probs=434.7
Q ss_pred eeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH--hhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 32 AYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 32 ~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
+||||+|+.+.. .++++||+||+++++++.++.+|++.|+++|++|++. |+++|.++|.++|+++++.|++++++|
T Consensus 1 ~~i~g~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~el 80 (471)
T cd07139 1 LFIGGRWVAPSGSETIDVVSPATEEVVGRVPEATPADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADEL 80 (471)
T ss_pred CeECCEeecCCCCCeEEeECCCCCCEeEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 489999987532 3899999999999999999999999999999999984 999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 108 AEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
++++++|+|||..++. .|+..+++.++++++.+++...........+...+.+++|+|||++|+|||||+.+.++++++
T Consensus 81 a~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i~~ 160 (471)
T cd07139 81 ARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGVVAAIVPWNAPLFLAALKIAP 160 (471)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccEEEEEcCCchHHHHHHHHHHH
Confidence 9999999999998775 599999999999999887654322111112456788999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+| +.+.++.|+.|++++.|.||||+.+|+.|++.++
T Consensus 161 ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g----~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~~~ 236 (471)
T cd07139 161 ALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA----DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG 236 (471)
T ss_pred HHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeC----CHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999996 3568899999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++
T Consensus 237 ~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~ 315 (471)
T cd07139 237 ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAA-LKVGDPLDPA 315 (471)
T ss_pred hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHHHHHHHh-CCcCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999998
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+++||++++.+++++.+++++++.+|+++++||..+.. ..|+|+.|||+.++++++++++||+||||++|++|+|.||
T Consensus 316 -~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 394 (471)
T cd07139 316 -TQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDEDD 394 (471)
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHHH
Confidence 99999999999999999999999999999999976432 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||+++|+++|||+++|||+|.+.+.++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 395 ai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~~~g~~~~~~ft~~k~i~~ 471 (471)
T cd07139 395 AVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGREGGPEGLDAYLETKSIYL 471 (471)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCccchHHHHHHHhceeEEeC
Confidence 999999999999999999999999999999999999999866 56779999999999999999999999999999863
|
The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. |
| >PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-98 Score=791.74 Aligned_cols=464 Identities=28% Similarity=0.455 Sum_probs=429.8
Q ss_pred ceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 31 ~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
.+||||+|+.+... ++++||+||+++++++.++.+|+++++++|++||+.|++++.++|.++|++++++|++++++|++
T Consensus 2 ~~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 81 (487)
T PRK09457 2 TLWINGDWIAGQGEAFESRNPVSGEVLWQGNDATAAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAE 81 (487)
T ss_pred CceECCEEecCCCCEEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 36999999876433 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhh
Q psy3132 110 IMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALA 189 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALa 189 (507)
++++|+|||..+++.|+..+++.+++++.......+.... ...+...+++++|+|||++|+|||||+.++++++++||+
T Consensus 82 ~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALa 160 (487)
T PRK09457 82 VIARETGKPLWEAATEVTAMINKIAISIQAYHERTGEKRS-EMADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALL 160 (487)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceec-cCCCceeEEEEeccEEEEEECCCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988877665543322 123456788999999999999999999999999999999
Q ss_pred cCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc-
Q psy3132 190 AGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG- 268 (507)
Q Consensus 190 aGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~- 268 (507)
+||+||+|||+.+|.++..+.+++.++|+|+|++|+|+| +.+.++.|++||+++.|+||||+.+|+.|++.++.+
T Consensus 161 aGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g----~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa~~~ 236 (487)
T PRK09457 161 AGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQG----GRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQP 236 (487)
T ss_pred cCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC----CHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999997 457899999999999999999999999999987755
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhH-HHHHHHHHHHHHhccccCCCC-CCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF-DQFVEMLKVEITKSFIQGDTS-KND 346 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~~g~~~-~~~ 346 (507)
.+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++| |+|+++|++++++ +++|+|. ++.
T Consensus 237 ~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~-~~vG~p~~~~~ 315 (487)
T PRK09457 237 EKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKR-LTVGRWDAEPQ 315 (487)
T ss_pred CCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHHHHHHhc-CcCCCCCcCCC
Confidence 578899999999999999999999999999999999999999999999999998 9999999999999 9999996 677
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++|+++++||...+. +|+|++|||+ +++++|++++||+||||++|++|+|.|||
T Consensus 316 -~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~PTvl-~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 316 -PFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQA-GTGLLTPGII-DVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred -CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCC-CCeeEecEEe-ccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 99999999999999999999999999999998865432 5899999999 79999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|..+ .+||+.|++++.
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~-~~~~~~k~~~~~ 470 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHRPSAYYA-ADYCAYPMASLE 470 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCCCCchhH-hhheeeeEEEEe
Confidence 9999999999999999999999999999999999999987553 4578999999999999999555 559999998876
|
|
| >cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-98 Score=786.28 Aligned_cols=451 Identities=35% Similarity=0.606 Sum_probs=427.2
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||.||+++++++.++.+|++.++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~p~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07107 1 VINPATGQVLARVPAASAADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPVSAMLGDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.++++++...++.+...+.. .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~ 159 (456)
T cd07107 81 MVAAALLDYFAGLVTELKGETIPVG-GRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSA 159 (456)
T ss_pred HHHHHHHHHHHHHHHHhCCccccCC-CCceEEEEEecceEEEEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHH
Confidence 9999999999988877766544322 245678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..+.+++.++ +|+|++|+|+++ +.++++.|++||.++.|.||||+.+|+.|++.++++++|+++|+|||||+||++
T Consensus 160 ~~l~~~~~~~-lP~gvv~~v~g~---~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~~ 235 (456)
T cd07107 160 LRLAELAREV-LPPGVFNILPGD---GATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEGIKHVTLELGGKNALIVFP 235 (456)
T ss_pred HHHHHHHHHh-CCcCcEEEEeCC---CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcCCCeEEEECCCCCeEEECC
Confidence 9999999996 999999999975 556889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHH-HHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAK-FRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 287 daDl~~aa~~i~~~~-~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
|||++.|++.+++++ |.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.++
T Consensus 236 dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~g~p~~~~-~~~Gpli~~~~~~~v~~~ 313 (456)
T cd07107 236 DADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAA-IKVGDPTDPA-TTMGPLVSRQQYDRVMHY 313 (456)
T ss_pred CCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCcCcccCHHHHHHHHHH
Confidence 999999999999995 9999999999999999999999999999999999 9999999999 999999999999999999
Q ss_pred HHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 366 VQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
|++|+.+|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++|||
T Consensus 314 i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vf 393 (456)
T cd07107 314 IDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIW 393 (456)
T ss_pred HHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEE
Confidence 99999999999999975321 258999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+|.++++++++++++|.|+||++....+.+||||+|+||+|+++|++++++||+.|+|+++
T Consensus 394 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~v~~~ 455 (456)
T cd07107 394 TNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGREECLEELLSYTQEKNVNVR 455 (456)
T ss_pred CCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 99999999999999999999998877677899999999999999999999999999998763
|
Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. |
| >cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-98 Score=785.47 Aligned_cols=462 Identities=37% Similarity=0.623 Sum_probs=433.1
Q ss_pred HHHHhhhccCCcceeECCEeeeCC--CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHH
Q psy3132 19 KYLQKLCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRW 96 (507)
Q Consensus 19 ~~~~~~~~~~~~~~~I~G~~~~~~--~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~ 96 (507)
.|+....+ ..++||||+|+.+. ..++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++
T Consensus 13 ~~~~~~~~--~~~~~i~g~~~~~~~~~~~~~~nP~t~~~i~~~~~a~~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~ 90 (480)
T cd07111 13 AWLDAHDR--SFGHFINGKWVKPENRKSFPTINPATGEVLASVLQAEEEDVDAAVAAARTAFESWSALPGHVRARHLYRI 90 (480)
T ss_pred HHhhhccc--cccceECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 45554443 44789999998754 238999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcc
Q psy3132 97 LKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNF 175 (507)
Q Consensus 97 a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 175 (507)
++.|++++++|++++++|+|||..+++ .|+..+++.+++++.+++...+ .+..++|+|||++|+||||
T Consensus 91 a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-----------~~~~~~P~GVV~~I~PwN~ 159 (480)
T cd07111 91 ARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT-----------ELAGWKPVGVVGQIVPWNF 159 (480)
T ss_pred HHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CcccceecceEEEECCCcc
Confidence 999999999999999999999999998 4999999999988887765422 1345899999999999999
Q ss_pred cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCH
Q psy3132 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGST 255 (507)
Q Consensus 176 P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~ 255 (507)
|+.+.++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+++ .+++..|+.||.+|.|+||||+
T Consensus 160 P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~----~~~~~~l~~~~~v~~v~ftGs~ 235 (480)
T cd07111 160 PLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGN----GSFGSALANHPGVDKVAFTGST 235 (480)
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCC----chHHHHHhcCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999999999973 3678999999999999999999
Q ss_pred HHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHh
Q psy3132 256 QVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITK 335 (507)
Q Consensus 256 ~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~ 335 (507)
.+|+.|.+.+++++||+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++
T Consensus 236 ~~g~~v~~~aa~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~ 315 (480)
T cd07111 236 EVGRALRRATAGTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSH 315 (480)
T ss_pred HHHHHHHHHHhccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccE
Q psy3132 336 SFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVA 415 (507)
Q Consensus 336 ~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl 415 (507)
+++|+|.+++ +++||++++.+++++.+++++++.+|+++++||..... .|+|++|||+.++++++++++||+||||+
T Consensus 316 -~~vg~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl 392 (480)
T cd07111 316 -LRVGDPLDKA-IDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPS-KGPFYPPTLFTNVPPASRIAQEEIFGPVL 392 (480)
T ss_pred -cCCCCCCCCC-CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEeeEEEecCCCCChhhcCCCCCCee
Confidence 9999999999 99999999999999999999999999999999875332 58999999999999999999999999999
Q ss_pred EeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhc
Q psy3132 416 VCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495 (507)
Q Consensus 416 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~ 495 (507)
+|++|+|.||||+++|+++|||++||||+|.+.+.++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++|
T Consensus 393 ~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~ 472 (480)
T cd07111 393 VVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGREGGKEGLYEY 472 (480)
T ss_pred EeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998777677789999999999999999999999
Q ss_pred hhceE
Q psy3132 496 TQIKY 500 (507)
Q Consensus 496 t~~k~ 500 (507)
|+.|+
T Consensus 473 ~~~k~ 477 (480)
T cd07111 473 LRPSW 477 (480)
T ss_pred hhccC
Confidence 99985
|
Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. |
| >cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-98 Score=781.96 Aligned_cols=450 Identities=36% Similarity=0.581 Sum_probs=426.0
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH--hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++||+||+++++++.++.+|+++|++.|++||+. |+. ++++|+++|++++++|++++++|++++++|+|||..+++.
T Consensus 1 ~~nP~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 79 (455)
T cd07120 1 SIDPATGEVIGTYADGGVAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKILGEARF 79 (455)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 4799999999999999999999999999999985 998 9999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
|+..+++.++++++.++...+...+. .++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 80 Ev~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~ 158 (455)
T cd07120 80 EISGAISELRYYAGLARTEAGRMIEP-EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQ 158 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEecceeEEEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChH
Confidence 99999999999999888766543322 23456789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH-cCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEE
Q psy3132 205 TALALAALAHE-AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283 (507)
Q Consensus 205 ~~~~l~~~l~~-aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 283 (507)
++..++++|.+ +|+|+|++|+|+++ +.++++.|++||+++.|.||||+.+|+.|++.+++++||+++|+|||||+|
T Consensus 159 ~~~~l~~~~~~aag~P~g~~~~v~g~---~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lElGG~~~~I 235 (455)
T cd07120 159 INAAIIRILAEIPSLPAGVVNLFTES---GSEGAAHLVASPDVDVISFTGSTATGRAIMAAAAPTLKRLGLELGGKTPCI 235 (455)
T ss_pred HHHHHHHHHHHhcCCCccceEEEecC---chhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeeE
Confidence 99999999999 79999999999974 567899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHH
Q psy3132 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363 (507)
Q Consensus 284 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~ 363 (507)
|++|+|++.|++.+++++|.|+||.|+++++||||++++++|+++|++++++ +++|+|.+++ +++||++++.++++++
T Consensus 236 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-l~~G~p~~~~-~~~gpli~~~~~~~~~ 313 (455)
T cd07120 236 VFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAA-VKVGPGLDPA-SDMGPLIDRANVDRVD 313 (455)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCcCCCCCCC-CCcCCccCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 9999999999 9999999999999999
Q ss_pred HHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 364 SIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 364 ~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+++++++++|+++++||..... .+|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||
T Consensus 314 ~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~i 393 (455)
T cd07120 314 RMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASV 393 (455)
T ss_pred HHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEE
Confidence 9999999999999998764321 24899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 394 ft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~l~~ft~~k~v~~ 455 (455)
T cd07120 394 WTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGRLHGVAALEDFIEYKHIYL 455 (455)
T ss_pred EcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999999987767789999999999999999999999999999864
|
Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. |
| >cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-98 Score=784.49 Aligned_cols=451 Identities=41% Similarity=0.657 Sum_probs=427.0
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (456)
T cd07145 1 IEVRNPANGEVIDTVPSLSREEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV 80 (456)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCC----CCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPV----KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.++++++.++.+.+...+... .+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~ 160 (456)
T cd07145 81 EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCc
Confidence 9999999999999887766554322111 234567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|.++..+.++|.++|+|+|++|+++|+ +.++++.|+.||+++.|.||||+.+|+.|.+.++++++|+++|+||||
T Consensus 161 ~~p~~~~~l~~~~~~ag~p~g~~~~v~g~---~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~v~lElgG~n 237 (456)
T cd07145 161 NTPLTAIELAKILEEAGLPPGVINVVTGY---GSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAGGTGKKVALELGGSD 237 (456)
T ss_pred cchHHHHHHHHHHHHcCCCcccEEEEeCC---CchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCceEEecCCCC
Confidence 99999999999999999999999999984 567889999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++
T Consensus 238 ~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~ 315 (456)
T cd07145 238 PMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKK-LKVGDPLDES-TDLGPLISPEAVE 315 (456)
T ss_pred eeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHHHHHHHHHHHhc-CCcCCCCCCC-CCcCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
++.+++++++.+|+++++||..+ .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 316 ~~~~~i~~a~~~ga~vl~gg~~~---~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 392 (456)
T cd07145 316 RMENLVNDAVEKGGKILYGGKRD---EGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQAS 392 (456)
T ss_pred HHHHHHHHHHHCCCEEEeCCCCC---CCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEE
Confidence 99999999999999999999764 389999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|++|+++||+.|+|.+
T Consensus 393 v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 393 VFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGREGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred EECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceeEEeC
Confidence 99999999999999999999999987653 3578999999999999999999999999999864
|
NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. |
| >cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-98 Score=787.64 Aligned_cols=461 Identities=25% Similarity=0.327 Sum_probs=418.1
Q ss_pred ceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHH-hHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA-FEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+... ++++||+||+++++++.++ +|+++|+++|++| |+.|+.+++++|+++|+++++.|++++++|+
T Consensus 2 ~~~I~g~~~~~~~~~~~~~nP~tg~~~~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la 80 (513)
T cd07128 2 QSYVAGQWHAGTGDGRTLHDAVTGEVVARVSSEG-LDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLY 80 (513)
T ss_pred ceeECCEEEcCCCCEEEeECCCCCCEEEEEcCCH-HHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999976433 9999999999999999876 8999999999997 7999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC--------ccccCCCCC-ceeEEEeec-ccEEEEEcCCcccHH
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG--------ELVPSPVKS-KELLMVREP-LGVVGLITPWNFPMA 178 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~-~~~~~~~~P-~Gvv~~i~p~n~P~~ 178 (507)
++ +.|+|||+.+++.|+..+++.++||+..+++..+ ...+...++ ...+++++| +|||++|+|||||++
T Consensus 81 ~l-~~e~Gkp~~ea~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~ 159 (513)
T cd07128 81 AL-SAATGATRRDSWIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVGQHILTPRRGVAVHINAFNFPVW 159 (513)
T ss_pred HH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccceEEEEecccEEEEECCcccHHH
Confidence 96 9999999999999999999999999998876542 111111112 135678999 599999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~ 257 (507)
++++++++||++||+||+|||+.+|+++..|.+++.++| +|+|++|+|+|+ +.++++.| +.+|.|+||||+.+
T Consensus 160 ~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~---~~~~~~~l---~~~d~v~fTGS~~~ 233 (513)
T cd07128 160 GMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGS---VGDLLDHL---GEQDVVAFTGSAAT 233 (513)
T ss_pred HHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCC---hHHHhccc---CCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999 999999999974 33344433 57899999999999
Q ss_pred HHHHHHhh--cccccccccccCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHH
Q psy3132 258 GKILYSHC--SQGIKRLSLELGGNAPFIVYSNAN-----LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330 (507)
Q Consensus 258 g~~i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 330 (507)
|+.|++.+ +++++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|+|||+++|++|+++|+
T Consensus 234 G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l~ 313 (513)
T cd07128 234 AAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALK 313 (513)
T ss_pred HHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHHHHHHHHHH
Confidence 99999985 488999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc------cCCCceeeceEeecCCCC--
Q psy3132 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT------KLGSKFFAPTILTNITPD-- 402 (507)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~~g~~~~Ptvl~~~~~~-- 402 (507)
+++++ +++|+|.+++ +++|||+++.+++++.++|++|+++ +++++||.... ..+|+|++|||+.+++++
T Consensus 314 ~~~~~-l~~G~p~~~~-~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~ 390 (513)
T cd07128 314 ARLAK-VVVGDPRLEG-VRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAA 390 (513)
T ss_pred HHHHh-cccCCCccCC-CCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCCCEEECCEEEeccCCccc
Confidence 99999 9999999999 9999999999999999999999988 99999996531 125899999999998874
Q ss_pred CCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCC---------CCC
Q psy3132 403 MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGII---------SHT 471 (507)
Q Consensus 403 ~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~---------~~~ 471 (507)
+.+++||+||||++|++|+|.||+|+++|+++|||++||||+|.+.+++++++++ +|+|+||+... ..+
T Consensus 391 ~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~ 470 (513)
T cd07128 391 TAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLP 470 (513)
T ss_pred chHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCC
Confidence 8999999999999999999999999999999999999999999999999999997 99999998642 235
Q ss_pred CCcccCCCCCCCCCC-chHHHHHhchhceEEE
Q psy3132 472 EAAFGGVKESGLGRE-GSRHGMEEFTQIKYMC 502 (507)
Q Consensus 472 ~~pfGG~~~SG~g~~-~g~~~l~~~t~~k~v~ 502 (507)
.+||||+|.||+|++ +|.+++++||+.|+|.
T Consensus 471 ~~pfGG~k~SG~G~~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 471 QLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCCcccCCCCcccccHHHHHHhheeeeee
Confidence 789999999999999 5799999999999874
|
The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. |
| >cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-98 Score=782.67 Aligned_cols=451 Identities=37% Similarity=0.617 Sum_probs=428.1
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH--hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHh
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE 125 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~--w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 125 (507)
+||+||+++++++.++.+|++++++.|++||+. |+++|.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 81 (454)
T cd07118 2 RSPAHGVVVARYAEGTVEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPISQARGE 81 (454)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH
Confidence 699999999999999999999999999999985 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
+..+++.+++++..++++.+...+....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.+
T Consensus 82 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~ 161 (454)
T cd07118 82 IEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGT 161 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHH
Confidence 99999999999988777665433322234566889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.++|.++|+|+|++|+++++ +.++++.|++|++++.|.||||+.+|+.|.+.++.+++|+++|+|||||+||+
T Consensus 162 ~~~l~~~~~~aG~P~g~~~~v~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~n~~iV~ 238 (454)
T cd07118 162 TLMLAELLIEAGLPAGVVNIVTGY---GATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAAARNLKKVSLELGGKNPQIVF 238 (454)
T ss_pred HHHHHHHHHhcCCCccceEEEecC---CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEeccCCCCceEEC
Confidence 999999999999999999999974 56689999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.++
T Consensus 239 ~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-l~~g~p~~~~-~~~gpli~~~~~~~~~~~ 316 (454)
T cd07118 239 ADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRK-VRVGDPLDPE-TKVGAIINEAQLAKITDY 316 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHh-cCcCCCCCCC-CcCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999 999999999999999999
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
+++++++|+++++||..+....|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|
T Consensus 317 i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d 396 (454)
T cd07118 317 VDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKD 396 (454)
T ss_pred HHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCC
Confidence 99999999999999987542258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++++||+.|++++
T Consensus 397 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~t~~k~~~~ 454 (454)
T cd07118 397 IDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGRELGRYGVEEYTELKTVHL 454 (454)
T ss_pred HHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCcCchHHHHHHHhceeEEeC
Confidence 9999999999999999999987777789999999999999999999999999999853
|
Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. |
| >cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-98 Score=783.49 Aligned_cols=451 Identities=39% Similarity=0.642 Sum_probs=427.2
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||.||+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (456)
T cd07110 1 VINPATEATIGEIPAATAEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAWDV 80 (456)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcC---ccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCCh
Q psy3132 127 VYANSFVDWFSEEARRTYG---ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~ 203 (507)
..+++.++++++.++.+.. ...+....+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p 160 (456)
T cd07110 81 DDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTS 160 (456)
T ss_pred HHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEecceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccch
Confidence 9999999999998877632 2222222355678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEE
Q psy3132 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283 (507)
Q Consensus 204 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 283 (507)
+++..+.++|.++|+|+|++|+|+|+ +.+.++.|+.||+++.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 161 ~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~~~i 237 (456)
T cd07110 161 LTELELAEIAAEAGLPPGVLNVVTGT---GDEAGAPLAAHPGIDKISFTGSTATGSQVMQAAAQDIKPVSLELGGKSPII 237 (456)
T ss_pred HHHHHHHHHHHHcCCCCCcEEEEecC---chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCeEEEEcCCCCeeE
Confidence 99999999999999999999999985 567889999999999999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHH
Q psy3132 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363 (507)
Q Consensus 284 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~ 363 (507)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.
T Consensus 238 V~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~Gpli~~~~~~~~~ 315 (456)
T cd07110 238 VFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEA-IRVGDPLEEG-VRLGPLVSQAQYEKVL 315 (456)
T ss_pred ECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-CCcCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 9999999999 9999999999999999
Q ss_pred HHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 364 SIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 364 ~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
+++++++.+|+++++||..+.. ..|+|+.|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++|||
T Consensus 316 ~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~ 395 (456)
T cd07110 316 SFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVI 395 (456)
T ss_pred HHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEE
Confidence 9999999999999999976431 258899999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 396 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 455 (456)
T cd07110 396 SRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGRELGEWGLDNYLEVKQIT 455 (456)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHhcceeEEe
Confidence 999999999999999999999987666678999999999999999999999999999985
|
Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. |
| >cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-97 Score=781.85 Aligned_cols=451 Identities=40% Similarity=0.623 Sum_probs=428.3
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||+||+++++++.++.+|++.+++.|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev 80 (457)
T cd07090 1 VIEPATGEVLATVHCAGAEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPIEEARVDI 80 (457)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.++++++.+++..+...+.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~ 159 (457)
T cd07090 81 DSSADCLEYYAGLAPTLSGEHVPLP-GGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCeeeccC-CCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHH
Confidence 9999999999998887655433321 256678899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..+.++|.++|+|+|++|+|+++ .++++.|+.|+++++|.||||+.+|+.|++.+++++||+++|+|||||+||++
T Consensus 160 ~~l~~~~~~aGlP~g~~~~v~g~----~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~ 235 (457)
T cd07090 160 LLLAEILTEAGLPDGVFNVVQGG----GETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKGIKHVTLELGGKSPLIIFD 235 (457)
T ss_pred HHHHHHHHHcCCCcccEEEEeCC----hhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhccCCceEEecCCCCceEECC
Confidence 99999999999999999999973 35889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.++|
T Consensus 236 dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~~~~~i 313 (457)
T cd07090 236 DADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKK-IRIGDPLDED-TQMGALISEEHLEKVLGYI 313 (457)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-CCcccccCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999998 9999999999999999999
Q ss_pred HHHHHCCCeEEeCCCcccc----CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 367 QDAISKGAKVILGGGKVTK----LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
++++.+|+++++||..... .+|+|++|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++|||
T Consensus 314 ~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~ 393 (457)
T cd07090 314 ESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVF 393 (457)
T ss_pred HHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEE
Confidence 9999999999999975421 258999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+|.+.++++++++++|.|+||+.....+.+||||+|.||+|+++|++++++||+.|+|++.
T Consensus 394 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~f~~~k~~~~~ 455 (457)
T cd07090 394 TRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGRENGTAALEHYTQLKTVYVE 455 (457)
T ss_pred cCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhCeEEEEEe
Confidence 99999999999999999999998766677899999999999999999999999999999875
|
NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. |
| >cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-97 Score=779.44 Aligned_cols=449 Identities=31% Similarity=0.508 Sum_probs=422.5
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHH-hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL 123 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~-w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 123 (507)
++++||.||+++++++.++.+|++.++++|++||+. |+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 1 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 80 (455)
T cd07148 1 LEVVNPFDLKPIGEVPTVDWAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPLVDAK 80 (455)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH
Confidence 357899999999999999999999999999999998 5679999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHhcCccccCC----CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccC
Q psy3132 124 GEVVYANSFVDWFSEEARRTYGELVPSP----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPA 199 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps 199 (507)
.|+..+++.++++++.++...+...+.. .++...+++++|+|||++|+|||||+.+.++++++||++||+||+|||
T Consensus 81 ~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps 160 (455)
T cd07148 81 VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPA 160 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCC
Confidence 9999999999999998887655432211 134567889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCC
Q psy3132 200 EDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGN 279 (507)
Q Consensus 200 ~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~ 279 (507)
+.+|+++..+.++|.++|+|+|++|+++++ .+.++.|+.||++|.|.||||+.+|+.|++.++. .+|+++|+|||
T Consensus 161 ~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~----~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~aa~-~~~~~lElGG~ 235 (455)
T cd07148 161 LATPLSCLAFVDLLHEAGLPEGWCQAVPCE----NAVAEKLVTDPRVAFFSFIGSARVGWMLRSKLAP-GTRCALEHGGA 235 (455)
T ss_pred CcccHHHHHHHHHHHHcCCCcCcEEEEeCC----hHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhc-CCcEEEecCCC
Confidence 999999999999999999999999999973 4678999999999999999999999999998876 49999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHH
Q psy3132 280 APFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQV 359 (507)
Q Consensus 280 ~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~ 359 (507)
||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.++
T Consensus 236 ~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~ 313 (455)
T cd07148 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEK-LVVGDPTDPD-TEVGPLIRPREV 313 (455)
T ss_pred CceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHHHHHHHHHHHHhc-CCCCCCCCCC-CcCCCCcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999 999999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEE
Q psy3132 360 EKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439 (507)
Q Consensus 360 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 439 (507)
+++.+++++++++|+++++||... +++|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 314 ~~~~~~i~~a~~~Ga~vl~gg~~~---~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a 390 (455)
T cd07148 314 DRVEEWVNEAVAAGARLLCGGKRL---SDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQA 390 (455)
T ss_pred HHHHHHHHHHHhCCCEEEeCCccC---CCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceE
Confidence 999999999999999999999765 47899999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCCCC-CCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISH-TEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~-~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+|.+.++++++++++|+|+||++.... +.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 391 ~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 391 AVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGTGGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred EEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCCCchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999876433 568999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-97 Score=780.39 Aligned_cols=450 Identities=40% Similarity=0.667 Sum_probs=428.9
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||.||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 80 (451)
T cd07150 1 FDDLNPADGSVYARVAVGSRQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF 80 (451)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
|+..+++.+++++.++++..+...+....+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~ 160 (451)
T cd07150 81 ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPV 160 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccEEEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcH
Confidence 99999999999999888766654443334566789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 205 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++..+.++|.++|+|+|++|+++++ +.++++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||
T Consensus 161 t~~~l~~~~~~ag~P~g~v~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~~~lelGG~~~~iV 237 (451)
T cd07150 161 IGLKIAEIMEEAGLPKGVFNVVTGG---GAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAGRHLKKITLELGGKNPLIV 237 (451)
T ss_pred HHHHHHHHHHHhCCCcCcEEEeeCC---CcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCceEeecCCCCeeEE
Confidence 9999999999999999999999974 5678999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+
T Consensus 238 ~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~v~~ 315 (451)
T cd07150 238 LADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKKFVARASK-LKVGDPRDPD-TVIGPLISPRQVERIKR 315 (451)
T ss_pred CCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-CCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999998 99999999999999999
Q ss_pred HHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC
Q psy3132 365 IVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444 (507)
Q Consensus 365 ~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 444 (507)
++++++.+|+++++||.. +|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 316 ~i~~a~~~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~ 391 (451)
T cd07150 316 QVEDAVAKGAKLLTGGKY----DGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTN 391 (451)
T ss_pred HHHHHHhCCCEEEeCCcc----CCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeC
Confidence 999999999999999864 4899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 445 DISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|.++++++++++++|.|+||++... .+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 392 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 392 DLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGREGGEWSMEEFTELKWITV 451 (451)
T ss_pred CHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCcCCcHHHHHHhheeeEEeC
Confidence 9999999999999999999988764 3678999999999999999999999999999864
|
Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. |
| >PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-97 Score=789.43 Aligned_cols=467 Identities=33% Similarity=0.544 Sum_probs=434.7
Q ss_pred ceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 31 ~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
+++|.|.|-.+...++++||+||+++++++.++.+|++.++++|++|++.|++++.++|.++|+++++.|++++++|+++
T Consensus 20 ~~~~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~ 99 (524)
T PRK09407 20 RRLTARVDGAAGPTREVTAPFTGEPLATVPVSTAADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDL 99 (524)
T ss_pred HHHHhhcCCCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566777666666999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc-cCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-PSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++|+|||..++..|+..++..+++++..+++..+... ... ......+.+++|+|||++|+|||||+.+.++++++||
T Consensus 100 ~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~AL 179 (524)
T PRK09407 100 VQLETGKARRHAFEEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPAL 179 (524)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999988877654321 111 1124678899999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +.+.++.|++| ++.|+||||+.+|+.|++.++++
T Consensus 180 aaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~---~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~~ 254 (524)
T PRK09407 180 LAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGP---GPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGRR 254 (524)
T ss_pred HcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecC---CchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999985 56788889886 78999999999999999999999
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +
T Consensus 255 ~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-l~~G~~~~~~-~ 332 (524)
T PRK09407 255 LIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFVRAFVAAVRA-MRLGAGYDYS-A 332 (524)
T ss_pred CCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCcC-C
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 9999999999 9
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
++||++++.+++++.+++++++++|+++++||......+|+|++|||+.++++++++++||+||||++|++|+|.||||+
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999753222479999999999999999999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC---CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII---SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~---~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|+++|||++||||+|.+.++++++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 491 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGRRHGAEGLLKYTESQTIATQ 491 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCccchHHHHHHhCCeEEEEEc
Confidence 9999999999999999999999999999999999998654 345689999999999999999999999999999876
|
|
| >PLN02174 aldehyde dehydrogenase family 3 member H1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-97 Score=775.02 Aligned_cols=431 Identities=24% Similarity=0.415 Sum_probs=401.0
Q ss_pred CCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHH
Q psy3132 62 MGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEA 140 (507)
Q Consensus 62 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~ 140 (507)
....|++.++++|++||+.|+++++++|.++|+++++.|++++++|++++++|+|||..++.. |+..+++.++|+++.+
T Consensus 7 ~~~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~ 86 (484)
T PLN02174 7 FGAADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQL 86 (484)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999975 9999999999999988
Q ss_pred HHhcCcc---ccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC
Q psy3132 141 RRTYGEL---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ 217 (507)
Q Consensus 141 ~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG 217 (507)
++..+.. ......+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++++++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~ 165 (484)
T PLN02174 87 KNWMAPEKAKTSLTTFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-Y 165 (484)
T ss_pred HHHhcccccccccccCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-h
Confidence 7655421 11111234578999999999999999999999999999999999999999999999999999999999 6
Q ss_pred CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHH
Q psy3132 218 IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGA 297 (507)
Q Consensus 218 lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i 297 (507)
+|+|++|+|+|. .+.+..|+. +.+|.|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+
T Consensus 166 lp~gvv~vv~G~----~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i 240 (484)
T PLN02174 166 LDSSAVRVVEGA----VTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLKVTVRRI 240 (484)
T ss_pred CCCCEEEEEECC----hHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHHHHHHHH
Confidence 999999999973 345667776 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeE
Q psy3132 298 MAAKF-RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376 (507)
Q Consensus 298 ~~~~~-~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 376 (507)
++++| .|+||.|++++|||||++++|+|+++|++++++ +++|+|.+ + +++||++++.+++++.++|+++ .+|+++
T Consensus 241 ~~g~f~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~G~p~~-~-~~~Gpli~~~~~~~v~~~i~~a-~~ga~~ 316 (484)
T PLN02174 241 IAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELET-FYGKNPME-S-KDMSRIVNSTHFDRLSKLLDEK-EVSDKI 316 (484)
T ss_pred HHHHhhCCCCCCCCcCcEEEEeHHHHHHHHHHHHHHHHh-hcCCCCcc-c-CCcCCCCCHHHHHHHHHHHHHH-HcCCEE
Confidence 99999 599999999999999999999999999999999 99999987 6 8999999999999999999998 789999
Q ss_pred EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q psy3132 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456 (507)
Q Consensus 377 ~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 456 (507)
++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++
T Consensus 317 ~~GG~~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l 394 (484)
T PLN02174 317 VYGGEKDR--ENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATV 394 (484)
T ss_pred EECCCcCC--CCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcC
Confidence 99997532 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEcCCCCCC--CCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 457 QVGMVGINEGIISH--TEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 457 ~~G~v~iN~~~~~~--~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|.|+||++.... +.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 395 ~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 444 (484)
T PLN02174 395 SAGGIVVNDIAVHLALHTLPFGGVGESGMGAYHGKFSFDAFSHKKAVLYR 444 (484)
T ss_pred CcceEEECCCcCCCCCCCCCCCCcCccccCccchHHHHHHhcceEEEEEC
Confidence 99999999876543 6789999999999999999999999999999876
|
|
| >cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-97 Score=777.24 Aligned_cols=450 Identities=39% Similarity=0.626 Sum_probs=428.2
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhH
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEV 126 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev 126 (507)
+||+||+++++++.++.+++++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+
T Consensus 2 ~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev 81 (453)
T cd07115 2 LNPATGELIARVAQASAEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIRAARRLDV 81 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999997 599
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.+++++.++++..+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++
T Consensus 82 ~~~i~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~ 160 (453)
T cd07115 82 PRAADTFRYYAGWADKIEGEVIPV-RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSA 160 (453)
T ss_pred HHHHHHHHHHHHHHHHhcCceecC-CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHH
Confidence 999999999999887776544332 2355678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..+.++|.++|+|+|++|+|+++ +.++++.|+.||++|.|+||||+.+|+.|++.++.++||+++|+|||||+||++
T Consensus 161 ~~l~~~~~~aGlP~~~~~~v~g~---~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~~p~iV~~ 237 (453)
T cd07115 161 LRIAELMAEAGFPAGVLNVVTGF---GEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAGNLKRVSLELGGKSANIVFA 237 (453)
T ss_pred HHHHHHHHhcCcCchheEEEecC---chhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCeEEEecCCCCceEECC
Confidence 99999999999999999999985 567889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++
T Consensus 238 dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~~~~~i 315 (453)
T cd07115 238 DADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARS-LRPGDPLDPK-TQMGPLVSQAQFDRVLDYV 315 (453)
T ss_pred CCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHHHHHHhc-CCcCCCCCCC-CCCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred HHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCH
Q psy3132 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 446 (507)
++++++|+++++||..+.. .|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.
T Consensus 316 ~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~ 394 (453)
T cd07115 316 DVGREEGARLLTGGKRPGA-RGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDL 394 (453)
T ss_pred HHHHHCCCEEEeCCCCCCC-CCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCH
Confidence 9999999999999976532 588999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 395 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 395 GRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGREMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCcCchHHHHHHhhceEEEEEe
Confidence 9999999999999999998776678899999999999999999999999999998763
|
4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. |
| >TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-97 Score=780.83 Aligned_cols=463 Identities=29% Similarity=0.458 Sum_probs=428.1
Q ss_pred eeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH
Q psy3132 32 AYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI 110 (507)
Q Consensus 32 ~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~ 110 (507)
+||+|+|+.+... ++++||.||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~ 80 (484)
T TIGR03240 1 LFIDGKWRAGQGESFSSTNPATQEVLWQGAAASAAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARV 80 (484)
T ss_pred CeECCEEecCCCCEEEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 4899999875433 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhc
Q psy3132 111 MTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAA 190 (507)
Q Consensus 111 ~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaa 190 (507)
+++|+|||..+++.|+..+++.+++++.......+..... .++...++.++|+|||++|+|||||+.++++++++||++
T Consensus 81 ~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ALaa 159 (484)
T TIGR03240 81 IARETGKPLWETRTEVASMIGKVAISIKAYHERTGESENP-MPDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLA 159 (484)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC-CCCceeEEEEecccEEEEECCCchHHHHHHHHHHHHHHc
Confidence 9999999999999999999999998887776655433221 233456888999999999999999999999999999999
Q ss_pred CCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc-c
Q psy3132 191 GCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG-I 269 (507)
Q Consensus 191 GN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~-~ 269 (507)
||+||+|||+.+|+++..+.+++.++|+|+|++|+|+| +.+.++.|+.||++|.|+||||+.+|+.|++.++.+ .
T Consensus 160 GN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g----~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa~~~~ 235 (484)
T TIGR03240 160 GNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQG----ARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPE 235 (484)
T ss_pred CCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeC----CHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhhhcCC
Confidence 99999999999999999999999999999999999997 457889999999999999999999999999987755 6
Q ss_pred cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhH-HHHHHHHHHHHHhccccCCCC-CCCC
Q psy3132 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF-DQFVEMLKVEITKSFIQGDTS-KNDK 347 (507)
Q Consensus 270 ~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~~g~~~-~~~~ 347 (507)
+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|++.+++ +++|+|. +++
T Consensus 236 ~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l~~~~~~-~~~g~~~~~~~- 313 (484)
T TIGR03240 236 KILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAER-LTVGAWDAEPQ- 313 (484)
T ss_pred CcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHHHHHHHh-cccCCCCcCCC-
Confidence 78999999999999999999999999999999999999999999999999984 9999999999999 9999974 666
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 427 (507)
+++||++++.+++++.+++++++++|+++++||...+. +++|++|||+ ++++++++++||+||||++|++|+|+||||
T Consensus 314 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~~~~i~PTvl-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 391 (484)
T TIGR03240 314 PFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDP-GAALLTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAI 391 (484)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCEEEcCEEE-ccCCCCHHHhCCCcCCeEEEEEeCCHHHHH
Confidence 89999999999999999999999999999998875432 5789999999 689999999999999999999999999999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 428 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+||||+|.||+|+++|.++++ ||+.|+++++
T Consensus 392 ~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~~~g~~~~~-~~~~~~~~~~ 468 (484)
T TIGR03240 392 AIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHRPSAYYAAD-YCAYPVASLE 468 (484)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCCCCchHHHh-heeeeEEEEe
Confidence 999999999999999999999999999999999999987553 467899999999999999977766 9999999887
|
Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism. |
| >cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-97 Score=777.14 Aligned_cols=450 Identities=37% Similarity=0.613 Sum_probs=425.3
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhh-cCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHh
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS-QTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE 125 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e 125 (507)
++||+||+++++++.++.+|++.++++|++|++.|. .++.++|.++|+++++.|++++++|++++++|+|||..+++.|
T Consensus 1 ~~~P~tg~~i~~~~~~~~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~e 80 (454)
T cd07109 1 VFDPSTGEVFARIARGGAADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPLTQARAD 80 (454)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHH
Confidence 479999999999999999999999999999999877 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
+..+++.++++++..++..+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|++
T Consensus 81 v~~~~~~l~~~~~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~ 159 (454)
T cd07109 81 VEAAARYFEYYGGAADKLHGETIPL-GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLT 159 (454)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccc-CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHH
Confidence 9999999999999887776544332 235567899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.++|.++|+|+|++|+++++ +.+.++.|+.|++++.|.||||+.+|+.|.+.+++++||+++|+|||||+||+
T Consensus 160 ~~~l~~~~~~aGlP~gv~~~v~g~---~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~p~~lElgG~~~~iV~ 236 (454)
T cd07109 160 ALRLAELAEEAGLPAGALNVVTGL---GAEAGAALVAHPGVDHISFTGSVETGIAVMRAAAENVVPVTLELGGKSPQIVF 236 (454)
T ss_pred HHHHHHHHHHcCcCccceEEEecC---chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEECCCCCceEEC
Confidence 999999999999999999999974 56789999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+ . +++||++++.+++++.++
T Consensus 237 ~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~G~p~~-~-~~~gpli~~~~~~~~~~~ 313 (454)
T cd07109 237 ADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRA-LRVGPGLE-D-PDLGPLISAKQLDRVEGF 313 (454)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHHHHHHHHh-CCCCCCcc-c-CcCCCccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999975 5 899999999999999999
Q ss_pred HHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEec
Q psy3132 366 VQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 443 (507)
+++++++|+++++||..... ..|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||
T Consensus 314 i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t 393 (454)
T cd07109 314 VARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWT 393 (454)
T ss_pred HHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEEC
Confidence 99999999999999875421 2589999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEEcCCC-CCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 444 NDISQAWRVGKKLQVGMVGINEGI-ISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 444 ~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
+|.+.++++++++++|+|+||+.. ...+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 394 ~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 454 (454)
T cd07109 394 RDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGREKGLEALYNYTQTKTVAV 454 (454)
T ss_pred CCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCccchHHHHHHHhceeEEeC
Confidence 999999999999999999999876 345678999999999999999999999999999863
|
Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. |
| >cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-97 Score=776.57 Aligned_cols=449 Identities=33% Similarity=0.564 Sum_probs=421.0
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHH
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 127 (507)
.||.||+++++++.++.+|+++|+++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..++..|+.
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~ev~ 80 (454)
T cd07101 1 EAPFTGEPLGELPQSTPADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFEEVL 80 (454)
T ss_pred CcCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCccc-cCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 128 YANSFVDWFSEEARRTYGELV-PSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
.+++.+++++..+.+..+... +.. ......+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~ 160 (454)
T cd07101 81 DVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALT 160 (454)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 999999999988876654321 111 113467899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.+++.++|+|+|++|+++|+ +.+.++.|++| ++.|.||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 161 ~~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~~~~~~~lElgG~~p~iV~ 235 (454)
T cd07101 161 ALWAVELLIEAGLPRDLWQVVTGP---GSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGRRLIGCSLELGGKNPMIVL 235 (454)
T ss_pred HHHHHHHHHHcCcCCCcEEEEeCC---cHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCceEEEC
Confidence 999999999999999999999985 56788999986 5889999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++|||+++.++++++++
T Consensus 236 ~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-~~~G~~~~~~-~~~gpli~~~~~~~v~~~ 313 (454)
T cd07101 236 EDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFVRRFVARTRA-LRLGAALDYG-PDMGSLISQAQLDRVTAH 313 (454)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHHHHHHHHHhh-CCCCCCCCCC-CCcCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999 999999999999999999
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
+++++++|+++++||......+|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|
T Consensus 314 v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d 393 (454)
T cd07101 314 VDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRD 393 (454)
T ss_pred HHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999999975322247999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCC---CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGII---SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~---~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 394 ~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~v~~ 454 (454)
T cd07101 394 GARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGRRHGAEGLLKYTETQTVAV 454 (454)
T ss_pred HHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCccchHHHHHHhcceEEEeC
Confidence 99999999999999999998654 34678999999999999999999999999999863
|
Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). |
| >cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-97 Score=775.68 Aligned_cols=452 Identities=38% Similarity=0.636 Sum_probs=426.8
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhh-cCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-H
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS-QTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-G 124 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~-~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ 124 (507)
++||+||+++++++.++.+|+++++++|++|++.|+ ++|.++|.++|++++++|++++++|++++++|+|||..++. .
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ 80 (459)
T cd07089 1 VINPATEEVIGTAPDAGAADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAM 80 (459)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHH
Confidence 479999999999999999999999999999999999 99999999999999999999999999999999999998775 5
Q ss_pred hHHHHHHHHHHHHHHHHHhcCcc-ccCC---CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGEL-VPSP---VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.++++++.+++..+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~ 160 (459)
T cd07089 81 QVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAP 160 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 99999999999999887765543 2211 1245678999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|.++..+.++|.++|+|+|++|+++|+ +.+++..|+.||+++.|.||||+.+|+.|++.+++++||+++|+||||
T Consensus 161 ~~p~~~~~l~~~~~~aglP~g~~~~v~g~---~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~aa~~~~~~~lelgG~n 237 (459)
T cd07089 161 DTPLSALLLGEIIAETDLPAGVVNVVTGS---DNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQAAATLKRVLLELGGKS 237 (459)
T ss_pred CChHHHHHHHHHHHHcCCCccceEEEecC---cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence 99999999999999999999999999985 566889999999999999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++++|+++|++++++ +++|+|.+++ +++||++++.+++
T Consensus 238 ~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gp~i~~~~~~ 315 (459)
T cd07089 238 ANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRYDEVVEALAAAFEA-LPVGDPADPG-TVMGPLISAAQRD 315 (459)
T ss_pred eeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCCCCCcCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999999 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 439 (507)
++.+++++++++|+++++||..... .+|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++
T Consensus 316 ~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~ 395 (459)
T cd07089 316 RVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSG 395 (459)
T ss_pred HHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeE
Confidence 9999999999999999999976431 258999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 396 ~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~l~~ft~~k~v~~ 459 (459)
T cd07089 396 GVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGRENGIEGLEEFLETKSIAY 459 (459)
T ss_pred EEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCCCchHHHHHHhhceeEEeC
Confidence 9999999999999999999999999887767788999999999999999999999999999863
|
The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. |
| >TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-97 Score=777.88 Aligned_cols=475 Identities=28% Similarity=0.425 Sum_probs=440.1
Q ss_pred cCcccchHHhhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCCC-CeeEEecCCCHHHHHHHHHHHHHHhHHh
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAND-EHLADVPDMGVEDVQYAIMSAKEAFEQW 81 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~tg-~~i~~v~~~~~~~v~~av~~A~~a~~~w 81 (507)
.|+|++.+..+..+..++.++. ..++||||+|+.++..++++||.|+ +++++++.++.+|++.|+++|++||+.|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~nP~t~~e~i~~~~~~~~~dv~~av~~A~~a~~~W 90 (500)
T TIGR01238 11 LGIDLDNESELKPLEAQIHAWADKTWQAAPIIGHSYKADGEAQPVTNPADRRDIVGQVFHANLAHVQAAIDSAQQAFPTW 90 (500)
T ss_pred CCcCCCCHHHHHHHHHHHHHHhcCceecCceECCEEecCCCeEEeeCCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 6899999999999888888753 5589999999874444999999996 8999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe
Q psy3132 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161 (507)
Q Consensus 82 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
++++.++|+++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++...+. ..+
T Consensus 91 ~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~l~~~a~~~~~~~~~------------~~~ 158 (500)
T TIGR01238 91 NATPAKERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIAEVREAVDFCRYYAKQVRDVLGE------------FSV 158 (500)
T ss_pred hcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCc------------eec
Confidence 99999999999999999999999999999999999999999999999999999999887644221 358
Q ss_pred ecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh
Q psy3132 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC 241 (507)
Q Consensus 162 ~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~ 241 (507)
+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|+ +.++++.|+
T Consensus 159 ~P~GVV~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~---~~~~~~~l~ 235 (500)
T TIGR01238 159 ESRGVFVCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGR---GADVGAALT 235 (500)
T ss_pred cCcceEEEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecC---cchHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999974 457899999
Q ss_pred cCCCccEEEEeCCHHHHHHHHHhhcccc---cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceech
Q psy3132 242 TSPHVAGISFTGSTQVGKILYSHCSQGI---KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318 (507)
Q Consensus 242 ~~~~v~~v~ftGs~~~g~~i~~~~~~~~---~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~ 318 (507)
.|++++.|+||||+.+|+.|.+.+++++ +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||
T Consensus 236 ~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~ 315 (500)
T TIGR01238 236 SDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQ 315 (500)
T ss_pred cCCCcCeEEEECCHHHHHHHHHHHhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEc
Confidence 9999999999999999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc--ccCCCceeeceEe
Q psy3132 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV--TKLGSKFFAPTIL 396 (507)
Q Consensus 319 ~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~~~~g~~~~Ptvl 396 (507)
++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++++++++++++|++++.++... ...+|+|++|||+
T Consensus 316 ~~i~d~f~~~L~~~~~~-~~vG~p~~~~-~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl 393 (500)
T TIGR01238 316 EDVADRVLTMIQGAMQE-LKVGVPHLLT-TDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLF 393 (500)
T ss_pred HhhHHHHHHHHHHHHHh-CCCCCCCCCC-CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEE
Confidence 99999999999999999 9999999999 999999999999999999999999999987543211 1125899999999
Q ss_pred ecCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCC
Q psy3132 397 TNITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTE 472 (507)
Q Consensus 397 ~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~ 472 (507)
.+ +++.++++|+||||++|++|+ ++||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.
T Consensus 394 ~~--~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~ 471 (500)
T TIGR01238 394 EL--DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGV 471 (500)
T ss_pred cc--CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCC
Confidence 74 688899999999999999998 799999999999999999999999999999999999999999987653 245
Q ss_pred CcccCCCCCCCC-CCchHHHHHhchhceE
Q psy3132 473 AAFGGVKESGLG-REGSRHGMEEFTQIKY 500 (507)
Q Consensus 473 ~pfGG~~~SG~g-~~~g~~~l~~~t~~k~ 500 (507)
+||||+|.||+| +++|++++++||+.|.
T Consensus 472 ~PfGG~k~SG~G~~~gg~~~~~~~~~~k~ 500 (500)
T TIGR01238 472 QPFGGQGLSGTGPKAGGPHYLYRLTQVQY 500 (500)
T ss_pred CCCCccccccCCCccCCHHHHHHHHhhcC
Confidence 799999999999 8999999999999873
|
This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase. |
| >cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-96 Score=781.29 Aligned_cols=493 Identities=29% Similarity=0.418 Sum_probs=444.4
Q ss_pred ccccCcccchHH-hhHHHHHhhhcc-CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 4 FSCLGYSVTVKQ-MHMKYLQKLCLS-TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 4 ~~~~g~~~~~~~-~~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
|-+.=||+.+.. .....++++... ...-.||+|+|..+...++++||.| |+++++++.++.+|+++++++|++|++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~g~~~~~~~~~~v~~P~t~g~~i~~~~~~~~~~v~~av~~A~~A~~~ 84 (518)
T cd07125 5 FVNRIFDLEVPLEALADALKAFDEKEWEAIPIINGEETETGEGAPVIDPADHERTIGEVSLADAEDVDAALAIAAAAFAG 84 (518)
T ss_pred hhHHhcCCCCCHHHHHHHHHHhhhcCcccCceECCEEeeCCCeEEEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 444445555432 222333333332 4456799999985555599999999 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (507)
|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.+++..+........+...+.+
T Consensus 85 w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~ 164 (518)
T cd07125 85 WSATPVEERAEILEKAADLLEANRGELIALAAAEAGKTLADADAEVREAIDFCRYYAAQARELFSDPELPGPTGELNGLE 164 (518)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEE
Confidence 99999999999999999999999999999999999999999999999999999999998877654321111224567889
Q ss_pred eecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhh
Q psy3132 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL 240 (507)
Q Consensus 161 ~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L 240 (507)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+++ +.++++.|
T Consensus 165 ~~P~GVV~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~---~~~~~~~L 241 (518)
T cd07125 165 LHGRGVFVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGD---GEEIGEAL 241 (518)
T ss_pred EecccEEEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecC---chhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999974 45688999
Q ss_pred hcCCCccEEEEeCCHHHHHHHHHhhccc---ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceec
Q psy3132 241 CTSPHVAGISFTGSTQVGKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI 317 (507)
Q Consensus 241 ~~~~~v~~v~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V 317 (507)
+.|+++|.|+||||+.+|+.|++.++++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++||||
T Consensus 242 ~~~~~vd~V~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V 321 (518)
T cd07125 242 VAHPRIDGVIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYL 321 (518)
T ss_pred hcCCCcCEEEEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEE
Confidence 9999999999999999999999988855 8999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEee
Q psy3132 318 QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILT 397 (507)
Q Consensus 318 ~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~ 397 (507)
|++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.+++++++. ++++++||..... +|+|+.|||+.
T Consensus 322 ~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~-~g~~~~Ptvl~ 397 (518)
T cd07125 322 QEEIAERFIEMLKGAMAS-LKVGDPWDLS-TDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDG-NGYFVAPGIIE 397 (518)
T ss_pred cchhHHHHHHHHHHHHhc-CCccCCCCCC-CCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCC-CCeEEccEEEe
Confidence 999999999999999999 9999999999 999999999999999999999987 4689999875422 58999999998
Q ss_pred cCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCC
Q psy3132 398 NITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTEA 473 (507)
Q Consensus 398 ~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~ 473 (507)
++ +|++++||+||||++|++|+ |.||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+
T Consensus 398 ~v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~ 475 (518)
T cd07125 398 IV--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQ 475 (518)
T ss_pred ec--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCC
Confidence 88 89999999999999999999 999999999999999999999999999999999999999999987653 3568
Q ss_pred cccCCCCCCCCC-CchHHHHHhchhceEEEecc
Q psy3132 474 AFGGVKESGLGR-EGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 474 pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~~ 505 (507)
||||+|.||+|+ ++|++++++||+.|+|++++
T Consensus 476 PfGG~~~SG~G~~~gg~~~~~~ft~~k~i~~~~ 508 (518)
T cd07125 476 PFGGWGLSGTGPKAGGPNYLLRFGNEKTVSLNT 508 (518)
T ss_pred CCCCcccccCCcccccHHHHHHhcceEEEEEEc
Confidence 999999999995 68899999999999998753
|
The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. |
| >cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-96 Score=773.34 Aligned_cols=445 Identities=36% Similarity=0.575 Sum_probs=422.2
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||+||+++++++.++.+|++.++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev 80 (446)
T cd07106 1 VINPATGEVFASAPVASEAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQFEV 80 (446)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.++++++... .+..... ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~--~~~~~~~-~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~ 157 (446)
T cd07106 81 GGAVAWLRYTASLDL--PDEVIED-DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCT 157 (446)
T ss_pred HHHHHHHHHHHhhhh--cCccccC-CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHH
Confidence 999999999988763 2222221 2355678999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..+++++.++ +|+|++|++++ +.++++.|++|+++|.|+||||+.+|+.|++.+++++||+++|+|||||+||++
T Consensus 158 ~~l~~~~~~~-lP~g~~~~v~g----~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~~~~lElGG~~p~iV~~ 232 (446)
T cd07106 158 LKLGELAQEV-LPPGVLNVVSG----GDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLKRVTLELGGNDAAIVLP 232 (446)
T ss_pred HHHHHHHHHh-CCcCeEEEeeC----ChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeeEEecCCCCeeEECC
Confidence 9999999996 99999999997 346889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++
T Consensus 233 dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~~i~~~i 310 (446)
T cd07106 233 DVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKA-AVVGDGLDPG-TTLGPVQNKMQYDKVKELV 310 (446)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHHHHHHh-cCCCCCCCCC-CCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred HHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCH
Q psy3132 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 446 (507)
++++.+|+++++||..++. .|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.
T Consensus 311 ~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~ 389 (446)
T cd07106 311 EDAKAKGAKVLAGGEPLDG-PGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDL 389 (446)
T ss_pred HHHHHCCCEEEeCCCcCCC-CCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999999986532 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 390 ~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 390 ERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGVEFGIEGLKEYTQTQVIN 445 (446)
T ss_pred HHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCccchHHHHHHhhceeEEe
Confidence 99999999999999999998877788999999999999999999999999999985
|
Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. |
| >TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-97 Score=798.01 Aligned_cols=461 Identities=27% Similarity=0.359 Sum_probs=419.8
Q ss_pred ceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHH-hHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA-FEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+... ++++||+||+++++++.++ +|+++|+++|++| |+.|++++.++|+++|+++++.|++++++|+
T Consensus 2 ~~~i~g~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela 80 (663)
T TIGR02278 2 QSYLSGEWRTGQGEGVPVRDASTGEVLARVTSEG-LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALY 80 (663)
T ss_pred ceeECCEEEcCCCCeEeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999876433 9999999999999999999 6999999999996 9999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhc--------CccccCCCCC-ceeEEEeecc-cEEEEEcCCcccHH
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY--------GELVPSPVKS-KELLMVREPL-GVVGLITPWNFPMA 178 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n~P~~ 178 (507)
+ +++|+|||+.+++.|+..+++.+++|+..+++.. +...+...++ ...++.++|+ |||++|+|||||+.
T Consensus 81 ~-~~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~Gvv~~I~pwN~P~~ 159 (663)
T TIGR02278 81 A-LAATTGATRRDNWVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAFNFPVW 159 (663)
T ss_pred H-HHHHcCCCHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccceEEEEEeCCceEEEEcCCchHHH
Confidence 9 5999999999999999999999999999887632 2222221112 3468899998 99999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~ 257 (507)
++++++++||++||+||+|||+.+|+++.++.++|.++| +|+|++|+|+|+ . ++.+..+++++.|+||||+.+
T Consensus 160 ~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~---~---~~~~~~~~~~~~V~FTGS~~~ 233 (663)
T TIGR02278 160 GLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGS---A---GDLLDHLDHRDVVAFTGSAAT 233 (663)
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCC---h---HHHHhcCCCCCEEEEECCHHH
Confidence 999999999999999999999999999999999999999 999999999963 2 223333467899999999999
Q ss_pred HHHHHHhh--cccccccccccCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHH
Q psy3132 258 GKILYSHC--SQGIKRLSLELGGNAPFIVYSNAN-----LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330 (507)
Q Consensus 258 g~~i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 330 (507)
|+.|++.+ +++++|+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 234 G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~l~ 313 (663)
T TIGR02278 234 ADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQ 313 (663)
T ss_pred HHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHHHHHHHHHH
Confidence 99999874 478999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCC-CCcccc
Q psy3132 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM-LCYTEE 409 (507)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~-~i~~~E 409 (507)
+++++ +++|+|.+++ +++||++++.++++++++|++|+++|+++++||.... +|+|++|||+.+++++| ++++||
T Consensus 314 ~~~~~-l~vG~p~~~~-t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~--~g~~~~PTvl~~~~~~~~~i~~eE 389 (663)
T TIGR02278 314 ARLAK-VVLGDPREEG-VDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL--DGAFFPPTLLLAEDPWAGAVHATE 389 (663)
T ss_pred HHHHh-ccCCCccccC-CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC--CCeeEccEEEeeCCcchhhHHhcc
Confidence 99999 9999999999 9999999999999999999999999999999997643 58999999999999886 799999
Q ss_pred eeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEE-cCCC-----C---CCCCCcccCC
Q psy3132 410 VFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL--QVGMVGI-NEGI-----I---SHTEAAFGGV 478 (507)
Q Consensus 410 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~G~v~i-N~~~-----~---~~~~~pfGG~ 478 (507)
+||||++|++|+|.||||+++|+++|||++||||+|...+++++++| ++|+|+| |... . ..+.+||||+
T Consensus 390 ~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~ 469 (663)
T TIGR02278 390 AFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGP 469 (663)
T ss_pred ccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999 8999999 6421 1 2356899999
Q ss_pred CCCCCCCC-chHHHHHhchhceEEEe
Q psy3132 479 KESGLGRE-GSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 479 ~~SG~g~~-~g~~~l~~~t~~k~v~~ 503 (507)
|.||+|++ +|.+++++||+.|+|..
T Consensus 470 k~SG~G~~~g~~~~l~~f~~~k~v~~ 495 (663)
T TIGR02278 470 GRAGGGEELGGLRSVKHYMQRTAIQG 495 (663)
T ss_pred ccCcCCCccchHHHHHHhceeEEEEc
Confidence 99999999 57899999999999865
|
This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. |
| >cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-96 Score=772.71 Aligned_cols=450 Identities=31% Similarity=0.504 Sum_probs=426.0
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHH
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 127 (507)
+||+||+++++++.++.+|++.++++|++|++.|++++.++|.++|++++++|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~ 80 (452)
T cd07102 1 ISPIDGSVIAERPLASLEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGGEIR 80 (452)
T ss_pred CCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHH
Q psy3132 128 YANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207 (507)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~ 207 (507)
.+++.+++++..+++..+........+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~ 160 (452)
T cd07102 81 GMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGE 160 (452)
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHH
Confidence 99999999998887665443222223556788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCC
Q psy3132 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSN 287 (507)
Q Consensus 208 ~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 287 (507)
.|.++|.++|+|+|++|+|+++ + +.++.|+.||.++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|
T Consensus 161 ~l~~~l~~aGlP~g~~~~v~g~---~-~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~v~lelgG~~~~iV~~d 236 (452)
T cd07102 161 RFAAAFAEAGLPEGVFQVLHLS---H-ETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGRFIKVGLELGGKDPAYVRPD 236 (452)
T ss_pred HHHHHHHhcCCCcCcEEEEeCC---c-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhcCCcEEEECCCCCceEEcCC
Confidence 9999999999999999999984 4 78899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHH
Q psy3132 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367 (507)
Q Consensus 288 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~ 367 (507)
||++.|++.+++++|+|+||.|+++++||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.++++
T Consensus 237 ADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L~~~~~~-l~vg~p~~~~-~~~gpli~~~~~~~i~~~i~ 314 (452)
T cd07102 237 ADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAFVAVVKG-YKLGDPLDPS-TTLGPVVSARAADFVRAQIA 314 (452)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CCCCCCcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999998 99999999999999999999
Q ss_pred HHHHCCCeEEeCCCccc--cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 368 DAISKGAKVILGGGKVT--KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 368 ~a~~~Ga~v~~gg~~~~--~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
+++.+|+++++||.... ..+|+|+.|||+.+++++|+++++|+||||++|++|+|.||||+++|+++|||++||||+|
T Consensus 315 ~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d 394 (452)
T cd07102 315 DAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKD 394 (452)
T ss_pred HHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCC
Confidence 99999999999997532 1258999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
.+.+.++++++++|+|+||++....+..||||+|+||+|+++|++++++||+.|++++
T Consensus 395 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~~~~~k~~~~ 452 (452)
T cd07102 395 IARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGVTLSRLGYDQLTRPKSYHL 452 (452)
T ss_pred HHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCccchHHHHHHHhceeEEeC
Confidence 9999999999999999999887667789999999999999999999999999999863
|
PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. |
| >cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-96 Score=772.28 Aligned_cols=448 Identities=38% Similarity=0.622 Sum_probs=424.6
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|.++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 80 (453)
T cd07094 1 LDVHNPYDGEVIGKVPADDRADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV 80 (453)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 36789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCC----CCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPV----KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.++++++.+++..+...+... .+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~ 160 (453)
T cd07094 81 EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999988877654333221 245677889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|+++..+++++.++|+|+|++|+++|+ +.++++.|++||+++.|+||||+.+|+.|.+.+ +++|+++|+||||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~~~~v~g~---~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a--~~~~~~lelGGk~ 235 (453)
T cd07094 161 KTPLSALELAKILVEAGVPEGVLQVVTGE---REVLGDAFAADERVAMLSFTGSAAVGEALRANA--GGKRIALELGGNA 235 (453)
T ss_pred cchHHHHHHHHHHHHcCCCcCcEEEEeCC---CchHHHHHhcCCCCCEEEEECcHHHHHHHHHHc--CCCceEEecCCCC
Confidence 99999999999999999999999999984 567899999999999999999999999999988 5899999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++
T Consensus 236 ~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~f~~~L~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~ 313 (453)
T cd07094 236 PVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKK-LKVGDPLDED-TDVGPLISEEAAE 313 (453)
T ss_pred ceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999998 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
++.+++++|+++|+++++||.. +|+|++|||+.+++++|+++++|+||||++|++|+|+||||+++|+++|||++|
T Consensus 314 ~~~~~i~~a~~~Ga~v~~gg~~----~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 389 (453)
T cd07094 314 RVERWVEEAVEAGARLLCGGER----DGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAG 389 (453)
T ss_pred HHHHHHHHHHHCCCEEEeCccC----CCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeE
Confidence 9999999999999999999864 488999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+|...++++++++++|+|+||++... .+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 390 i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 390 IFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGREGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred EECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCcCChHHHHHHHhceeEEeC
Confidence 99999999999999999999999987654 4689999999999999999999999999999863
|
ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. |
| >cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-96 Score=773.32 Aligned_cols=453 Identities=39% Similarity=0.656 Sum_probs=428.2
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
++++||.||+++++++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 4 ~~~~~P~t~~~i~~~~~~~~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 83 (462)
T cd07112 4 FATINPATGRVLAEVAACDAADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPISDA 83 (462)
T ss_pred EEeECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHH
Confidence 78899999999999999999999999999999998 4999999999999999999999999999999999999999999
Q ss_pred h-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCC
Q psy3132 123 L-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201 (507)
Q Consensus 123 ~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~ 201 (507)
+ .|+..+++.+++++..++++.+...+. ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.
T Consensus 84 ~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~ 162 (462)
T cd07112 84 LAVDVPSAANTFRWYAEAIDKVYGEVAPT-GPDALALITREPLGVVGAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQ 162 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCceecC-CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCC
Confidence 7 499999999999999888776543332 23456778999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc-ccccccccccCCCC
Q psy3132 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS-QGIKRLSLELGGNA 280 (507)
Q Consensus 202 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~-~~~~~~~lelgG~~ 280 (507)
+|.++..+.++|.++|+|+|++|+|+|+ +.++++.|+.|++++.|.||||+.+|+.|++.++ .++||+++|+||||
T Consensus 163 ~p~~~~~l~~~~~~aGlP~g~v~~v~g~---~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n 239 (462)
T cd07112 163 SPLTALRLAELALEAGLPAGVLNVVPGF---GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKS 239 (462)
T ss_pred CCHHHHHHHHHHHhcCCCCCcEEEEeCC---CchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHHHhcCCEEEecCCCCC
Confidence 9999999999999999999999999985 5678999999999999999999999999999988 58999999999999
Q ss_pred cEEEcCCC-CHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHH
Q psy3132 281 PFIVYSNA-NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQV 359 (507)
Q Consensus 281 ~~iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~ 359 (507)
|+||++|+ |++.|++.+++++|.|+||.|+++++||||++++++|+++|++++++ +++|+|.+++ +++||++++.++
T Consensus 240 ~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~ 317 (462)
T cd07112 240 PNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAARE-WKPGDPLDPA-TRMGALVSEAHF 317 (462)
T ss_pred eEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHHHHHHHhc-CCcCCCCCCC-CCCCCCcCHHHH
Confidence 99999999 99999999999999999999999999999999999999999999999 9999999999 999999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCCccc-cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcE
Q psy3132 360 EKVDSIVQDAISKGAKVILGGGKVT-KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA 438 (507)
Q Consensus 360 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~ 438 (507)
+++.++|++++++|+++++||.... ..+|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||+
T Consensus 318 ~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~ 397 (462)
T cd07112 318 DKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLA 397 (462)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccce
Confidence 9999999999999999999997642 124889999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 439 a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
+||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 398 ~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~f~~~k~i~~ 462 (462)
T cd07112 398 ASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGRDKSLHALDKYTELKTTWI 462 (462)
T ss_pred EEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCccchHHHHHHHhceeEEEC
Confidence 99999999999999999999999999877667789999999999999999999999999999853
|
NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. |
| >cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-95 Score=771.32 Aligned_cols=464 Identities=37% Similarity=0.563 Sum_probs=437.2
Q ss_pred cceeECCEeeeCC-CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcC-CHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 30 TQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT-TPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 30 ~~~~I~G~~~~~~-~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~-~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
.++||||+|+.+. ..++++||+||+++++++.++.+|+++++++|++|++.|+++ +.++|.++|+++++.|++++++|
T Consensus 2 ~~~~i~g~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el 81 (473)
T cd07082 2 FKYLINGEWKESSGKTIEVYSPIDGEVIGSVPALSALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEV 81 (473)
T ss_pred CCceECCEEecCCCCeEeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4679999999765 339999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCC----CCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV----KSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++++++|+|||..+++.|+..+++.++++++..+++.+...+... .+...+.+++|+|||++|+|||||+.+++++
T Consensus 82 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~ 161 (473)
T cd07082 82 ANLLMWEIGKTLKDALKEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVSK 161 (473)
T ss_pred HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHHH
Confidence 999999999999999999999999999999988776554332211 2456788999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++ +.++++.|+.|+++|.|+||||+.+|+.|.+
T Consensus 162 i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~ 238 (473)
T cd07082 162 LIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGR---GREIGDPLVTHGRIDVISFTGSTEVGNRLKK 238 (473)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecC---cHHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5668899999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.++ ++|+++|+|||||+||++|||++.|++.+++++|.++||.|+++++||||++++|+|+++|.+++++ +++|+|.
T Consensus 239 ~a~--~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~-~~~g~~~ 315 (473)
T cd07082 239 QHP--MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVAK-LKVGMPW 315 (473)
T ss_pred HhC--CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHHHHHHHHHHHhc-CCCCCCC
Confidence 876 8999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++.+|+++++||... .|+|+.|||+.++++++++++||+||||++|++|+|+
T Consensus 316 ~~~-~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~---~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 391 (473)
T cd07082 316 DNG-VDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE---GGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDI 391 (473)
T ss_pred CCC-CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCH
Confidence 998 999999999999999999999999999999999764 3899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+|||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~~~g~~~l~~~~~~k~i~ 471 (473)
T cd07082 392 EEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGTQGIGDALRSMTRRKGIV 471 (473)
T ss_pred HHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCCCChHHHHHHhhceeEEE
Confidence 9999999999999999999999999999999999999999987654 356899999999999999999999999999987
Q ss_pred e
Q psy3132 503 F 503 (507)
Q Consensus 503 ~ 503 (507)
+
T Consensus 472 ~ 472 (473)
T cd07082 472 I 472 (473)
T ss_pred E
Confidence 5
|
NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. |
| >PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-97 Score=782.14 Aligned_cols=458 Identities=42% Similarity=0.722 Sum_probs=430.3
Q ss_pred eeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcC
Q psy3132 38 WVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESG 116 (507)
Q Consensus 38 ~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~G 116 (507)
|+.+... ++++||.||+++++++.++.+|++.++++|++|++.|+.++..+|.++|+++++.|+++.++|++++++|+|
T Consensus 1 w~~~~~~~~~v~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~G 80 (462)
T PF00171_consen 1 WVSSESETFDVINPATGEVIGEVPSATAEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETG 80 (462)
T ss_dssp EEE-TSSEEEEEETTTECEEEEEEEBSHHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CcCCCCCEEcCCCCCCcCEEEEEcCCCHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhcccccccccccccc
Confidence 6666544 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEe
Q psy3132 117 KPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI 196 (507)
Q Consensus 117 k~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvl 196 (507)
||..+++.|+..+++.+++++++++.+.+...+. ..+...+..++|+|||++|+|||||+.++++++++||++||+||+
T Consensus 81 k~~~~a~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ALaaGN~VVl 159 (462)
T PF00171_consen 81 KPIAEARGEVDRAIDFLRYYADAARKLAGEVLPS-DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAPALAAGNTVVL 159 (462)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEE-STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHHHHHTT-EEEE
T ss_pred cccccccchhhhhhhhhhhhhhcccceehhhccc-ccccccccccccccceeecccccccccccccchhhhhccccccee
Confidence 9999999999999999999999998877655554 467889999999999999999999999999999999999999999
Q ss_pred ccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccccccccc
Q psy3132 197 KPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL 276 (507)
Q Consensus 197 kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel 276 (507)
|||+.+|.++..+.+++.++|+|+|++|+++|+ +.+.+..|+.||+++.|.||||+.+|+.|.+.++++++|+++|+
T Consensus 160 kps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~---~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a~~~~~~v~lel 236 (462)
T PF00171_consen 160 KPSEQAPLTALLLAELLEEAGLPPGVVNVVPGD---GSEVGEALVSHPDVDLVSFTGSTATGRAIAKAAAKNLKPVVLEL 236 (462)
T ss_dssp EEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSS---THHHHHHHHHTTTEEEEEEESEHHHHHHHHHHHHTTTSEEEEEE
T ss_pred eeccccccccccchhhccccccccccccccccc---cccccceeeeccccceeeecchhhhhhhhhhhcccccccccccc
Confidence 999999999999999999999999999999985 68899999999999999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCH
Q psy3132 277 GGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINL 356 (507)
Q Consensus 277 gG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~ 356 (507)
|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++
T Consensus 237 gG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-l~~g~~~~~~-~~~gpl~~~ 314 (462)
T PF00171_consen 237 GGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEALKERVAK-LRVGDPLDES-TDVGPLISK 314 (462)
T ss_dssp CEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHHHHHHHT-SEBSSTTSTT-CSBCHCSSH
T ss_pred cccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhhhhcccc-ccccCCcccc-ccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999998 999999999
Q ss_pred HHHHHHHHHHHHHHHCCCeEEeCCC--ccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCC
Q psy3132 357 AQVEKVDSIVQDAISKGAKVILGGG--KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN 434 (507)
Q Consensus 357 ~~~~~~~~~i~~a~~~Ga~v~~gg~--~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 434 (507)
.+++++.+++++++.+|+++++||. ......|+|++|||+.+++++|+++++|+||||++|++|+|+|||++++|+++
T Consensus 315 ~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~ 394 (462)
T PF00171_consen 315 AQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSE 394 (462)
T ss_dssp HHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSS
T ss_pred hhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccchhhhhcccccC
Confidence 9999999999999999999999992 22223699999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCC-CcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 435 TGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTE-AAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 435 ~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~-~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|||++||||+|.+.++++++++++|+|+||++...... +||||+|.||+|+++|.+|+++||+.|+|
T Consensus 395 ~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~~~g~~~l~~~~~~k~V 462 (462)
T PF00171_consen 395 YGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGREGGPEGLDEFTQIKTV 462 (462)
T ss_dssp EESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESEBSHHHHHHGTEEEEEE
T ss_pred CCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCcchHHHHHHHhCCccCC
Confidence 99999999999999999999999999999998775433 69999999999999999999999999986
|
2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A .... |
| >cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-96 Score=769.59 Aligned_cols=452 Identities=40% Similarity=0.656 Sum_probs=427.7
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++||.||+++++++.++.+|++.++++|++|++ .|+.+|.++|.++|++++++|.+++++|++++++|+|||..+++.
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~ 80 (457)
T cd07114 1 SINPATGEPWARVPEASAADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 479999999999999999999999999999997 599999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
|+..+++.+++++..++...+...+....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.
T Consensus 81 ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~ 160 (457)
T cd07114 81 QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPA 160 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchH
Confidence 99999999999998877665543332224556788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 205 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++..|+++|.++|+|+|+||+++++ +.++++.|+.|+++++|.||||+.+|+.|++.+++++||+++|+|||||+||
T Consensus 161 ~~~~l~~~l~~aglP~~vv~~v~g~---~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV 237 (457)
T cd07114 161 STLELAKLAEEAGFPPGVVNVVTGF---GPETGEALVEHPLVAKIAFTGGTETGRHIARAAAENLAPVTLELGGKSPNIV 237 (457)
T ss_pred HHHHHHHHHHHcCcCCCcEEEEeCC---CchHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEecCCCCeeEE
Confidence 9999999999999999999999985 5678899999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
++|||++.|++.|++++|.|+||.|+++++||||++++++|+++|++++++ +++|+|.+++ +++||++++.+++++.+
T Consensus 238 ~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~~~~ 315 (457)
T cd07114 238 FDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARA-IRVGDPLDPE-TQMGPLATERQLEKVER 315 (457)
T ss_pred CCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCCCCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999 99999999999999999
Q ss_pred HHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 365 IVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 365 ~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
++++++++|+++++||..... ..|+|++|||+.+++++++++++|+||||++|++|+|.||||+++|+++|||++||
T Consensus 316 ~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~i 395 (457)
T cd07114 316 YVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGI 395 (457)
T ss_pred HHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEE
Confidence 999999999999999976431 24899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 396 ft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~~~g~~~~~~f~~~k~~~~ 457 (457)
T cd07114 396 WTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGRENGIEAIREYTQTKSVWI 457 (457)
T ss_pred ECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCccchHHHHHHHhceeEEeC
Confidence 99999999999999999999999877667789999999999999999999999999999864
|
Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. |
| >cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-96 Score=768.34 Aligned_cols=447 Identities=37% Similarity=0.599 Sum_probs=421.2
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (452)
T cd07147 1 LEVTNPYTGEVVARVALAGPDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG 80 (452)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCC----CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSP----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.+++++..+.+..+...... ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 81 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~ 160 (452)
T cd07147 81 EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPAS 160 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988776544332211 1344567889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|.++.++.++|.++|+|+|++|+++++ .+.++.|+.|++++.|+||||+.+|+.|.+.++ .+|+++|+||||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~g~v~~v~g~----~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a~--~~~v~lelgG~~ 234 (452)
T cd07147 161 RTPLSALILGEVLAETGLPKGAFSVLPCS----RDDADLLVTDERIKLLSFTGSPAVGWDLKARAG--KKKVVLELGGNA 234 (452)
T ss_pred CCcHHHHHHHHHHHHcCCCcCcEEEEeCC----ccchhHHhcCCCCCEEEEECCHHHHHHHHHHhC--cCceEeecCCCC
Confidence 99999999999999999999999999973 457889999999999999999999999999876 479999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++
T Consensus 235 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~ 312 (452)
T cd07147 235 AVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKA-LKTGDPKDDA-TDVGPMISESEAE 312 (452)
T ss_pred cEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHHHHHHHHHHHh-CCCCCCCCCC-CCCCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999998 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
++.+++++++++|+++++||.. +|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 313 ~~~~~i~~a~~~Ga~~l~gg~~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ 388 (452)
T cd07147 313 RVEGWVNEAVDAGAKLLTGGKR----DGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAG 388 (452)
T ss_pred HHHHHHHHHHHCCCEEEecCCc----CCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence 9999999999999999999975 488999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 389 v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 389 VFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGREGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred EECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhcceeEEeC
Confidence 99999999999999999999999987653 4678999999999999999999999999999874
|
Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. |
| >PRK11903 aldehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-96 Score=773.23 Aligned_cols=463 Identities=24% Similarity=0.332 Sum_probs=416.6
Q ss_pred ceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHh-HHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 31 QAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF-EQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 31 ~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~-~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
++||||+|+.+... ++++||+||+++++++. +.+|+++|+++|++|+ +.|+++|+.+|+++|+++++.|++++++|+
T Consensus 6 ~~~i~G~~~~~~~~~~~~~nP~tge~l~~v~~-~~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela 84 (521)
T PRK11903 6 ANYVAGRWQAGSGAGTPLFDPVTGEELVRVSA-TGLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYY 84 (521)
T ss_pred hhhCCCEEEcCCCCeeeeECCCCCCEEEEecC-ChHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999975333 89999999999999997 8899999999999995 999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCC--------CCceeEEEeec-ccEEEEEcCCcccHHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV--------KSKELLMVREP-LGVVGLITPWNFPMAM 179 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~P-~Gvv~~i~p~n~P~~~ 179 (507)
+++++|+|||+.+++.|+..+++.++||++++..+.+....... .....+..++| +|||++|+|||||+.+
T Consensus 85 ~~~~~e~Gkp~~~a~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 85 DIATANSGTTRNDSAVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 99999999999999999999999999999988766432211000 12234677899 6999999999999999
Q ss_pred HHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHH
Q psy3132 180 ITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258 (507)
Q Consensus 180 ~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g 258 (507)
+++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+|+|+ +.++.+.| ++++.|+||||+.+|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~---~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGS---SAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCC---chHHHhcc---cCCCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999 999999999974 44555444 789999999999999
Q ss_pred HHHHHhh--cccccccccccCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHH
Q psy3132 259 KILYSHC--SQGIKRLSLELGGNAPFIVYSNAN-----LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331 (507)
Q Consensus 259 ~~i~~~~--~~~~~~~~lelgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~ 331 (507)
+.|++.+ +.+++|+++|||||||+||++||| ++.+++.+++++|.|+||.|++++|||||+++||+|+++|++
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~~L~~ 318 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAA 318 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHHHHHHHHHHH
Confidence 9999865 478999999999999999999999 599999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc-----cCCCceeeceEeecCCC--CCC
Q psy3132 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT-----KLGSKFFAPTILTNITP--DML 404 (507)
Q Consensus 332 ~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~~g~~~~Ptvl~~~~~--~~~ 404 (507)
++++ +++|+|.+++ +++|||+++.+++++.++|+.+ .+|+++++||.... ..+|+|++|||+.++++ ++.
T Consensus 319 ~~~~-l~~G~p~~~~-~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~ 395 (521)
T PRK11903 319 RLAK-TTVGNPRNDG-VRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATA 395 (521)
T ss_pred HHHh-ccCCCCCCCc-CccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccch
Confidence 9999 9999999999 9999999999999999999954 57999999996521 12489999999987654 468
Q ss_pred CcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEEcCCCC---------CCCCC
Q psy3132 405 CYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL--QVGMVGINEGII---------SHTEA 473 (507)
Q Consensus 405 i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~G~v~iN~~~~---------~~~~~ 473 (507)
+++||+||||++|++|+|.||+|+++|+++|||++||||+|.+.++++++++ ++|+|+||+... ..+.+
T Consensus 396 i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~ 475 (521)
T PRK11903 396 VHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQS 475 (521)
T ss_pred HHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCC
Confidence 8999999999999999999999999999999999999999999999999999 899999997532 23578
Q ss_pred cccCCCCCCCCCC-chHHHHHhchhceEEEe
Q psy3132 474 AFGGVKESGLGRE-GSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 474 pfGG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 503 (507)
||||+|.||+|++ +|.+++++||+.|+|.-
T Consensus 476 PfGG~k~SG~Gr~~g~~~~l~~~t~~~~~~~ 506 (521)
T PRK11903 476 LHGGPGRAGGGEELGGLRALAFYHRRSAVQA 506 (521)
T ss_pred CCCCCCcCcCCcccccHHHHHHHhccceeeC
Confidence 9999999999999 55899999999888753
|
|
| >cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-95 Score=766.33 Aligned_cols=448 Identities=38% Similarity=0.617 Sum_probs=423.7
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-Hh
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GE 125 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 125 (507)
++||+||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~e 80 (450)
T cd07092 1 VVDPATGEEIATVPDASAADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDE 80 (450)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998775 59
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
+..+++.+++++..++.+.+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~ 160 (450)
T cd07092 81 LPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLT 160 (450)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHH
Confidence 99999999999988776655432222234467889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.++|.+ |+|+|++|+++++ +.++++.|+.|++++.|+||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 161 ~~~l~~~~~~-glP~g~~~~v~g~---~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~~~~~~lelgG~~p~iV~ 236 (450)
T cd07092 161 TLLLAELAAE-VLPPGVVNVVCGG---GASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADTLKRVHLELGGKAPVIVF 236 (450)
T ss_pred HHHHHHHHHh-cCCcccEEEeecC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCCcEEEECCCCCeeEEC
Confidence 9999999999 9999999999974 55688999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.++
T Consensus 237 ~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~i~~~ 314 (450)
T cd07092 237 DDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSA-IRVGDPDDED-TEMGPLNSAAQRERVAGF 314 (450)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHHHHHHHhh-CCcCCCCCCC-CccCcccCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999998 999999999999999999
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
++++. +|+++++||...+. .|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|
T Consensus 315 i~~a~-~ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d 392 (450)
T cd07092 315 VERAP-AHARVLTGGRRAEG-PGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRD 392 (450)
T ss_pred HHHHH-cCCEEEeCCCCCCC-CccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCC
Confidence 99998 99999999976532 58999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
.+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 393 ~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 393 VGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGKDLSIYALEDYTRIKHVM 449 (450)
T ss_pred HHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCCCChHHHHHHHheeeEEe
Confidence 999999999999999999988777778999999999999999999999999999985
|
NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. |
| >cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-95 Score=767.23 Aligned_cols=450 Identities=38% Similarity=0.650 Sum_probs=424.1
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh-hhhhHh
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP-TESLGE 125 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~-~~a~~e 125 (507)
++||.||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++.|
T Consensus 1 ~~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~e 80 (457)
T cd07108 1 VINPATGQVIGEVPRSRAADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALRTQARPE 80 (457)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999997 689899
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
+..+++.++++++.+.++.+...+.. .+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.+
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~ 159 (457)
T cd07108 81 AAVLADLFRYFGGLAGELKGETLPFG-PDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLA 159 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccC-CCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHH
Confidence 99999999999998877665543322 34566788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.+++.++ +|+|++|+++|+ +.++++.|+.|+++|.|.||||+.+|+.|++.++++++|+++|+|||||+||+
T Consensus 160 ~~~l~~~~~~~-lP~~~~~~v~g~---~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~l~~~~lelgG~~~~iV~ 235 (457)
T cd07108 160 VLLLAEILAQV-LPAGVLNVITGY---GEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADRLIPVSLELGGKSPMIVF 235 (457)
T ss_pred HHHHHHHHHHh-CCcCcEEEEeCC---chHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhccCCeEEEECCCCCeeEEC
Confidence 99999999997 999999999975 56788999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHH-HHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAA-KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 286 ~daDl~~aa~~i~~~-~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
+|||++.|++.++++ +|.|+||.|++++|||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.+
T Consensus 236 ~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~vg~p~~~~-~~~gpli~~~~~~~~~~ 313 (457)
T cd07108 236 PDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSK-LKIGDPLDEA-TDIGAIISEKQFAKVCG 313 (457)
T ss_pred CCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHHHHHHHHhh-CCCCCCCCCC-CCcCCCCCHHHHHHHHH
Confidence 999999999999999 59999999999999999999999999999999999 9999999998 99999999999999999
Q ss_pred HHHHHHH-CCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 365 IVQDAIS-KGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 365 ~i~~a~~-~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
+++++++ +|+++++||..+.. .+|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 314 ~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~ 393 (457)
T cd07108 314 YIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAY 393 (457)
T ss_pred HHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeE
Confidence 9999998 99999999976421 2589999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHH-HHhchhceEEEe
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHG-MEEFTQIKYMCF 503 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~-l~~~t~~k~v~~ 503 (507)
|||+|.+.++++++++++|.|+||++....+.+||||+|.||+|+++|.++ +++||+.|+|++
T Consensus 394 vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~f~~~k~i~~ 457 (457)
T cd07108 394 VWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGREASLEGMLEHFTQKKTVNI 457 (457)
T ss_pred EEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCCCccchhHHHHhhceEEEeC
Confidence 999999999999999999999999987667789999999999999999866 799999999863
|
NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. |
| >cd07099 ALDH_DDALDH Methylomonas sp | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-95 Score=764.93 Aligned_cols=447 Identities=35% Similarity=0.602 Sum_probs=422.4
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHH
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVV 127 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~ 127 (507)
+||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.|+.
T Consensus 1 ~~P~t~~~~~~~~~~~~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ev~ 80 (453)
T cd07099 1 RNPATGEVLGEVPVTDPAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRADAGLEVL 80 (453)
T ss_pred CCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCcc-ccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 128 YANSFVDWFSEEARRTYGEL-VPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 128 ~~~~~l~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
.+++.++++++.+.+..+.. .+.. ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~ 160 (453)
T cd07099 81 LALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPL 160 (453)
T ss_pred HHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchH
Confidence 99999999999887665432 2211 23556789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 205 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++..|.++|.++|+|+|++|+|+|+ + +.++.|++| .+|.|+||||+.+|+.|.+.++++++|+++|+|||||+||
T Consensus 161 ~~~~l~~~l~~ag~P~g~~~vv~g~---~-~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV 235 (453)
T cd07099 161 VGELLAEAWAAAGPPQGVLQVVTGD---G-ATGAALIDA-GVDKVAFTGSVATGRKVMAAAAERLIPVVLELGGKDPMIV 235 (453)
T ss_pred HHHHHHHHHHHcCCCCCeEEEEeCC---c-hHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEE
Confidence 9999999999999999999999974 3 678889987 5999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+
T Consensus 236 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~-l~~G~~~~~~-~~~gp~i~~~~~~~~~~ 313 (453)
T cd07099 236 LADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARA-LRPGADDIGD-ADIGPMTTARQLDIVRR 313 (453)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CcccCCcCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999 99999999999999999
Q ss_pred HHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC
Q psy3132 365 IVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444 (507)
Q Consensus 365 ~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 444 (507)
++++++++|+++++||.... .+|+|++|||+.+++++++++++|+||||++|++|+|.||||+++|+++|||++||||+
T Consensus 314 ~i~~a~~~ga~~~~gg~~~~-~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~ 392 (453)
T cd07099 314 HVDDAVAKGAKALTGGARSN-GGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSR 392 (453)
T ss_pred HHHHHHhCCCEEEeCCCcCC-CCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcC
Confidence 99999999999999997652 25899999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 445 DISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|.+.++++++++++|.|+||+... ..+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 393 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 393 DLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGGRRHGAEGLREFCRPKAIA 452 (453)
T ss_pred CHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCCccChHHHHHHhcceEEEe
Confidence 999999999999999999998764 3478999999999999999999999999999985
|
4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. |
| >cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-95 Score=763.57 Aligned_cols=450 Identities=55% Similarity=0.946 Sum_probs=429.2
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhH
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 126 (507)
++||.||+++++++.++.+|+++++++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+
T Consensus 1 ~~~P~tg~~i~~~~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev 80 (451)
T cd07103 1 VINPATGEVIGEVPDAGAADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARGEV 80 (451)
T ss_pred CcCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH
Q psy3132 127 VYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~ 206 (507)
..+++.+++++..+++..+...+....+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~ 160 (451)
T cd07103 81 DYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSA 160 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHH
Confidence 99999999999888776665444333456788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 207 ~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
..+.++|.++|+|+|++|+++++ +.+.++.|+.|+++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++
T Consensus 161 ~~l~~~l~~aglP~g~v~~v~~~---~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~ 237 (451)
T cd07103 161 LALAELAEEAGLPAGVLNVVTGS---PAEIGEALCASPRVRKISFTGSTAVGKLLMAQAADTVKRVSLELGGNAPFIVFD 237 (451)
T ss_pred HHHHHHHHHcCCCcccEEEEecC---chhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECC
Confidence 99999999999999999999974 456889999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++
T Consensus 238 dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~~~~~~-~~~gp~i~~~~~~~~~~~i 315 (451)
T cd07103 238 DADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKK-LKVGNGLDEG-TDMGPLINERAVEKVEALV 315 (451)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CCCCcCcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 9999999999 9999999999999999999
Q ss_pred HHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCH
Q psy3132 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 446 (507)
++++.+|+++++||..... +|+|++|||+.+++++++++++|+||||++|++|+|.+|||+++|+++|||++||||+|.
T Consensus 316 ~~a~~~ga~~l~gg~~~~~-~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~ 394 (451)
T cd07103 316 EDAVAKGAKVLTGGKRLGL-GGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDL 394 (451)
T ss_pred HHHHHCCCEEEeCCCcCCC-CCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCH
Confidence 9999999999999976532 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+.++++++++++|.|+||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 395 ~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 395 ARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGREGGKEGLEEYLETKYVS 450 (451)
T ss_pred HHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCccchHHHHHHHhceeEEe
Confidence 99999999999999999998777778999999999999999999999999999985
|
Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. |
| >cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-95 Score=761.01 Aligned_cols=440 Identities=36% Similarity=0.590 Sum_probs=416.6
Q ss_pred CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHH
Q psy3132 53 DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSF 132 (507)
Q Consensus 53 g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~ 132 (507)
|+++++++.++.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.
T Consensus 1 ~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~i~~ 80 (443)
T cd07152 1 GAVLGEVGVADAADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGFEVGAAIGE 80 (443)
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHH-HHHHH
Q psy3132 133 VDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA-LALAA 211 (507)
Q Consensus 133 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~-~~l~~ 211 (507)
+++++..+....+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++ ..+.+
T Consensus 81 l~~~~~~~~~~~~~~~~~-~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~ 159 (443)
T cd07152 81 LHEAAGLPTQPQGEILPS-APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIAR 159 (443)
T ss_pred HHHHHHhHHHhCCccccc-cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHH
Confidence 999998776554433332 2455678899999999999999999999999999999999999999999999996 78999
Q ss_pred HHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHH
Q psy3132 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQ 291 (507)
Q Consensus 212 ~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~ 291 (507)
+|.++|+|+|++|+++| +.++++.|+.||+++.|+||||+.+|+.|.+.+++++||+++|+|||||+||++|||++
T Consensus 160 ~~~~ag~P~gvv~~v~g----~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~lElGGk~~~iV~~dAdl~ 235 (443)
T cd07152 160 LFEEAGLPAGVLHVLPG----GADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKKVSLELGGKNALIVLDDADLD 235 (443)
T ss_pred HHHHhCcCcCcEEEecC----ChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCcEEEECCCCCeEEECCCCCHH
Confidence 99999999999999996 35688999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH
Q psy3132 292 KAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAIS 371 (507)
Q Consensus 292 ~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~ 371 (507)
.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++.
T Consensus 236 ~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~ 313 (443)
T cd07152 236 LAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKLAAKAKH-LPVGDPATGQ-VALGPLINARQLDRVHAIVDDSVA 313 (443)
T ss_pred HHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCcCCCcCHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999 9999999998 999999999999999999999999
Q ss_pred CCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHH
Q psy3132 372 KGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWR 451 (507)
Q Consensus 372 ~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~ 451 (507)
+|+++++||.. +|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.+++
T Consensus 314 ~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~ 389 (443)
T cd07152 314 AGARLEAGGTY----DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMA 389 (443)
T ss_pred CCCEEEeccCc----CCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHH
Confidence 99999999974 48999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcceeeEEEcCCCCCC-CCCcccCCCCCCCC-CCchHHHHHhchhceEEEe
Q psy3132 452 VGKKLQVGMVGINEGIISH-TEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 452 ~~~~l~~G~v~iN~~~~~~-~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~ 503 (507)
+++++++|.|+||++.... +.+||||+|.||+| +++|++++++||+.|++++
T Consensus 390 ~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 390 LADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGSRFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred HHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCCccCcHHHHHHhhceeEEeC
Confidence 9999999999999876643 67999999999999 8889999999999999863
|
NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. |
| >PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-95 Score=792.86 Aligned_cols=465 Identities=25% Similarity=0.345 Sum_probs=418.9
Q ss_pred CCcceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHH-hHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA-FEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.+. ++++||.||+++++++.++ +|+++|+++|++| ++.|+++++.+|+++|++++++|+++++
T Consensus 3 ~~~~~~i~G~~~~~~~~~~~~~nP~tg~~i~~~~~~~-~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ 81 (675)
T PRK11563 3 QKLQSYVAGRWQTGQGEGRPLHDAVTGEPVARVSSEG-LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKE 81 (675)
T ss_pred ccccceecCEEEcCCCCceeccCCCCCCEEEEEcCCc-HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHH
Confidence 34578999999976433 9999999999999999987 6999999999998 7999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhc--------CccccCCCCC-ceeEEEeecc-cEEEEEcCCcc
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY--------GELVPSPVKS-KELLMVREPL-GVVGLITPWNF 175 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n~ 175 (507)
+|++ +++|+|||..+++.|+..+++.+++|+..+++.. +...+...++ ...+..++|+ |||++|+||||
T Consensus 82 ela~-l~~e~GK~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~GVv~~I~PwNf 160 (675)
T PRK11563 82 ELYA-LSAQTGATRRDSWIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAVHINAFNF 160 (675)
T ss_pred HHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccceEEEeecCceEEEECCCch
Confidence 9998 5999999999999999999999999999886542 2222211112 2246788997 99999999999
Q ss_pred cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCC
Q psy3132 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGS 254 (507)
Q Consensus 176 P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs 254 (507)
|+.++++++++||++||+||+|||+.+|+++..|.+++.++| +|+|++|+|+|+ + ++.+..++.+++|.||||
T Consensus 161 P~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~---~---~~~~~~~~~i~~v~FTGS 234 (675)
T PRK11563 161 PVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGS---A---GDLLDHLDGQDVVTFTGS 234 (675)
T ss_pred HHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCC---H---HHHhhcCCCCCEEEEECc
Confidence 999999999999999999999999999999999999999999 999999999973 2 223334467999999999
Q ss_pred HHHHHHHHHh--hcccccccccccCCCCcEEEcCCCC-----HHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHH
Q psy3132 255 TQVGKILYSH--CSQGIKRLSLELGGNAPFIVYSNAN-----LQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327 (507)
Q Consensus 255 ~~~g~~i~~~--~~~~~~~~~lelgG~~~~iV~~daD-----l~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 327 (507)
+.+|+.|++. ++.++||+++|||||||+||++||| ++.|++.+++++|.|+||.|++++|+|||+++||+|++
T Consensus 235 ~~~G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~ 314 (675)
T PRK11563 235 AATAQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIE 314 (675)
T ss_pred HHHHHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHHHHHHH
Confidence 9999999985 4588999999999999999999995 99999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc------cCCCceeeceEeecCCC
Q psy3132 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT------KLGSKFFAPTILTNITP 401 (507)
Q Consensus 328 ~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~~g~~~~Ptvl~~~~~ 401 (507)
+|++++++ +++|+|.+++ +++|||+++.+++++.++|++|+++ +++++||.... ..+|+|++|||+.++++
T Consensus 315 ~l~~~~~~-l~vG~p~d~~-t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~ 391 (675)
T PRK11563 315 ALRARLAK-VVVGDPRLEG-VRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDP 391 (675)
T ss_pred HHHHHHhc-CccCCCCCCC-CcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCCeeECCEEEeccCc
Confidence 99999999 9999999999 9999999999999999999999999 99999995321 12589999999999998
Q ss_pred --CCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCC--------C
Q psy3132 402 --DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGII--------S 469 (507)
Q Consensus 402 --~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~--------~ 469 (507)
++++++||+||||++|++|+|.||||+++|+++|||++||||+|...+.+++++++ +|.||||+.+. .
T Consensus 392 ~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~ 471 (675)
T PRK11563 392 LEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGS 471 (675)
T ss_pred hhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCC
Confidence 57999999999999999999999999999999999999999999999999999997 99999997521 1
Q ss_pred -CCCCcccCCCCCCCCCC-chHHHHHhchhceEEEe
Q psy3132 470 -HTEAAFGGVKESGLGRE-GSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 470 -~~~~pfGG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 503 (507)
.+.+||||+|.||+|++ +|.+++++|++.|+|..
T Consensus 472 ~~~~~pfGG~k~SG~G~~~~g~~~~~~f~~~k~~~~ 507 (675)
T PRK11563 472 PLPQLVHGGPGRAGGGEELGGLRGVKHYMQRTAVQG 507 (675)
T ss_pred CCcCCCcCCCCCCCCCccccchhHHHHhheeeeeec
Confidence 25789999999999999 57999999999999864
|
|
| >cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-94 Score=756.28 Aligned_cols=445 Identities=37% Similarity=0.571 Sum_probs=417.3
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||+||+++++++.++.+++++++++|+++ |+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ 77 (451)
T cd07146 1 LEVRNPYTGEVVGTVPAGTEEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY 77 (451)
T ss_pred CCccCCCCCCEEEEEcCCCHHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 357899999999999999999999999998865 88899999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCC----CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSP----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.+++++..+....+...+.. ..+...+..++|+|||++|+|||||+...++++++||++||+||+|||+
T Consensus 78 ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~ 157 (451)
T cd07146 78 EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSE 157 (451)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999988776654332211 1345678899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|+++..+.++|.++|+|+|++|+++++ +.++++.|++||+++.|.||||+.+|+.|.+.++ .+|+++|+||||
T Consensus 158 ~~p~~~~~l~~~l~~aglP~g~v~~v~g~---~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~a~--~~~~~lElGG~~ 232 (451)
T cd07146 158 KTPLSAIYLADLLYEAGLPPDMLSVVTGE---PGEIGDELITHPDVDLVTFTGGVAVGKAIAATAG--YKRQLLELGGND 232 (451)
T ss_pred CchHHHHHHHHHHHHcCcCccceEEEecC---chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhc--CCceeeecCCCc
Confidence 99999999999999999999999999974 5678999999999999999999999999998775 689999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.+++ +++|||+++.+++
T Consensus 233 p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~g~p~~~~-~~~gpli~~~~~~ 310 (451)
T cd07146 233 PLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVADEFVDLLVEKSAA-LVVGDPMDPA-TDMGTVIDEEAAI 310 (451)
T ss_pred eEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHHHHHHHHHHHHHhc-CCCCCCCCCC-CCcCCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999998 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
++.+++++++++|+++++||.. .|+|++|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 311 ~v~~~v~~a~~~Ga~vl~gg~~----~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ 386 (451)
T cd07146 311 QIENRVEEAIAQGARVLLGNQR----QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSG 386 (451)
T ss_pred HHHHHHHHHHhCCCEEEeCCCc----CCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEE
Confidence 9999999999999999999964 488999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCC-CCCchHHHHHhchhceEEEe
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGL-GREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~-g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+ |+++|++|+++||+.|+|++
T Consensus 387 i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 387 VCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGGKEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred EECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCcccChHHHHHHHhceeEEeC
Confidence 99999999999999999999999986543 46789999999995 89999999999999999853
|
Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. |
| >cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-95 Score=753.95 Aligned_cols=428 Identities=38% Similarity=0.636 Sum_probs=405.4
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC-
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG- 145 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~- 145 (507)
++.|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++..+++...
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~~~~~~~~~~~ 80 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIAEARAEVEKCAWICRYYAENAEAFLAD 80 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999998887644
Q ss_pred ccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEE
Q psy3132 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225 (507)
Q Consensus 146 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~ 225 (507)
...+. ++...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..|.++|.++|+|+|++|+
T Consensus 81 ~~~~~--~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~ 158 (429)
T cd07100 81 EPIET--DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQN 158 (429)
T ss_pred eeccC--CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEE
Confidence 22221 2445788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhc
Q psy3132 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNC 305 (507)
Q Consensus 226 v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 305 (507)
|+++ + +.+..|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 159 v~g~---~-~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~ 234 (429)
T cd07100 159 LLID---S-DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNA 234 (429)
T ss_pred EeCC---c-hhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhcc
Confidence 9974 3 46788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc
Q psy3132 306 GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385 (507)
Q Consensus 306 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 385 (507)
||.|++++|||||+++||+|+++|++++.+ +++|+|++++ +++||++++.+++++.+++++++.+|+++++||...+.
T Consensus 235 GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~ 312 (429)
T cd07100 235 GQSCIAAKRFIVHEDVYDEFLEKFVEAMAA-LKVGDPMDED-TDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDG 312 (429)
T ss_pred CCCCCCCeEEEEcHHHHHHHHHHHHHHHHh-ccCCCCccCC-CCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 999999999999999999999999999999 9999999999 99999999999999999999999999999999976432
Q ss_pred CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcC
Q psy3132 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINE 465 (507)
Q Consensus 386 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~ 465 (507)
.|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+||+
T Consensus 313 -~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~ 391 (429)
T cd07100 313 -PGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFING 391 (429)
T ss_pred -CCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 466 GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 466 ~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
+....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 392 ~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~~ 429 (429)
T cd07100 392 MVKSDPRLPFGGVKRSGYGRELGRFGIREFVNIKTVWV 429 (429)
T ss_pred CCCCCCCCCcCCccccccCCcchHHHHHHhcceeEEeC
Confidence 87767789999999999999999999999999999853
|
Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. |
| >cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-94 Score=756.19 Aligned_cols=451 Identities=31% Similarity=0.548 Sum_probs=418.9
Q ss_pred cCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhH
Q psy3132 48 YNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEV 126 (507)
Q Consensus 48 ~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev 126 (507)
+||+||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|.+++++|++++++|+|||..+++ .|+
T Consensus 1 ~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~ 80 (465)
T cd07098 1 YDPATGQHLGSVPADTPEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEI 80 (465)
T ss_pred CCCCCCCeeEEeeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5999999999999999999999999999999999999999999999999999999999999999999999999996 599
Q ss_pred HHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCCh
Q psy3132 127 VYANSFVDWFSEEARRTYGE-LVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203 (507)
Q Consensus 127 ~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~ 203 (507)
..+++.+++++..++..... ..+.. ......++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p 160 (465)
T cd07098 81 LVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVA 160 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCc
Confidence 99999999998877664322 21211 1234567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH----HHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCC
Q psy3132 204 LTALALAAL----AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGN 279 (507)
Q Consensus 204 ~~~~~l~~~----l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~ 279 (507)
+++..++++ |.++|+|+|++|+|+|+ .++++.|+.||+|+.|.||||+.+|+.|.+.+++++||+++|+|||
T Consensus 161 ~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~----~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~~~~~~~lelgG~ 236 (465)
T cd07098 161 WSSGFFLSIIRECLAACGHDPDLVQLVTCL----PETAEALTSHPVIDHITFIGSPPVGKKVMAAAAESLTPVVLELGGK 236 (465)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCeEEEEECC----HHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCC
Confidence 999876554 56899999999999973 3789999999999999999999999999999999999999999999
Q ss_pred CcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHH
Q psy3132 280 APFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQV 359 (507)
Q Consensus 280 ~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~ 359 (507)
||+||++|||++.|++.+++++|.++||.|++++|||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.++
T Consensus 237 ~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-l~~G~p~~~~-~~~Gpli~~~~~ 314 (465)
T cd07098 237 DPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQA-LRQGPPLDGD-VDVGAMISPARF 314 (465)
T ss_pred CeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHHHHHHHHHHHHHHh-cCCCCCCCCC-CCcCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 9999999999 999999999999
Q ss_pred HHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCC
Q psy3132 360 EKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTG 436 (507)
Q Consensus 360 ~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 436 (507)
+++.+++++++.+|+++++||..... .+|+|++|||+.+++++++++++|+||||++|++|+|.||||+++|+++||
T Consensus 315 ~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~g 394 (465)
T cd07098 315 DRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYG 394 (465)
T ss_pred HHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCC
Confidence 99999999999999999999865321 258999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCHHHHHHHHhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 437 LAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 437 l~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|++||||+|.+.++++++++++|.|+||.... ..+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 395 Lsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~~~g~~~~~~~~~~k~~~~~ 464 (465)
T cd07098 395 LGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGRFAGEEGLRGLCNPKSVTED 464 (465)
T ss_pred ceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCccChHHHHHHhheeEEEEEe
Confidence 99999999999999999999999999998653 246799999999999999999999999999999764
|
Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. |
| >cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-94 Score=754.07 Aligned_cols=451 Identities=39% Similarity=0.658 Sum_probs=425.9
Q ss_pred ccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-Hh
Q psy3132 47 VYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GE 125 (507)
Q Consensus 47 ~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~e 125 (507)
.+||+||+++++++.++.+|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++ .|
T Consensus 1 ~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~e 80 (455)
T cd07093 1 NFNPATGEVLAKVPEGGAAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPITLARTRD 80 (455)
T ss_pred CcCCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999998886 49
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~ 205 (507)
+..+++.++++++......+...+. ..+...+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|++
T Consensus 81 v~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~ 159 (455)
T cd07093 81 IPRAAANFRFFADYILQLDGESYPQ-DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLT 159 (455)
T ss_pred HHHHHHHHHHHHHhHHHhCCccccC-CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHH
Confidence 9999999999998876654433322 135567889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 206 ~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
+..+.++|.++|+|+|++|+++++ +.++++.|+.|++++.|.||||+.+|+.|++.+++++||+++|+|||||+||+
T Consensus 160 ~~~l~~~l~~aglP~g~v~~v~g~---~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~ 236 (455)
T cd07093 160 AWLLAELANEAGLPPGVVNVVHGF---GPEAGAALVAHPDVDLISFTGETATGRTIMRAAAPNLKPVSLELGGKNPNIVF 236 (455)
T ss_pred HHHHHHHHHhcCCCccceEEEecC---chHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhhcccceEeecCCCCceEEC
Confidence 999999999999999999999974 56788999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.++||.|+++++||||++++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.++
T Consensus 237 ~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~~~~~ 314 (455)
T cd07093 237 ADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKA-LKVGDPLDPD-TEVGPLISKEHLEKVLGY 314 (455)
T ss_pred CCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHHHHHHHh-CCCCCCCCCC-CCcCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 9999999999 999999999999999999
Q ss_pred HHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 366 VQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
+++++.+|+++++||..... ..|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++|||
T Consensus 315 i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~ 394 (455)
T cd07093 315 VELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVW 394 (455)
T ss_pred HHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999976431 248999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|++++
T Consensus 395 t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07093 395 TRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGREGGDYSLEFYTELKNVCI 455 (455)
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCCCchHHHHHHHhceeEEeC
Confidence 9999999999999999999999987777779999999999999999999999999999863
|
In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. |
| >cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-93 Score=752.88 Aligned_cols=447 Identities=40% Similarity=0.656 Sum_probs=421.6
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||.||+++++++.++.++++.++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 1 ~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~ 80 (453)
T cd07149 1 IEVISPYDGEVIGRVPVASEEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIKDARK 80 (453)
T ss_pred CCccCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCC----CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSP----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
|+..+++.++++++.+....+...+.. ..+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+
T Consensus 81 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~ 160 (453)
T cd07149 81 EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPAS 160 (453)
T ss_pred HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCC
Confidence 999999999999888776655332211 1133457889999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|.++..+.++|.++|+|+|++|+++++ +.++++.|+.||++|.|+||||+.+|+.|++.++ ++|+++|+||||
T Consensus 161 ~~p~~~~~l~~~l~~ag~P~gvv~~v~g~---~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a~--~~~~~lelGGk~ 235 (453)
T cd07149 161 QTPLSALKLAELLLEAGLPKGALNVVTGS---GETVGDALVTDPRVRMISFTGSPAVGEAIARKAG--LKKVTLELGSNA 235 (453)
T ss_pred cchHHHHHHHHHHHHcCcCccceEEeecC---chHHHHHHhcCCCCCEEEEECCHHHHHHHHHHcC--CCceeeecCCCc
Confidence 99999999999999999999999999974 5667899999999999999999999999999875 789999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|+|++.|++.+++++|.++||.|+++++||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++
T Consensus 236 p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~L~~~~~~-~~~g~p~~~~-~~~gpl~~~~~~~ 313 (453)
T cd07149 236 AVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKK-LVVGDPLDED-TDVGPMISEAEAE 313 (453)
T ss_pred eEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHHHHHHHHHHHHh-CCcCCCCCCC-CccccccCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 9999999998 9999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~ 440 (507)
++.+++++++.+|+++++||.. +|+|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++|
T Consensus 314 ~~~~~i~~a~~~ga~v~~gg~~----~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~ 389 (453)
T cd07149 314 RIEEWVEEAVEGGARLLTGGKR----DGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAG 389 (453)
T ss_pred HHHHHHHHHHHCCCEEEeCCCC----CCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEE
Confidence 9999999999999999999865 388999999999999999999999999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 441 FFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 441 v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|||+|.+.++++++++++|.|+||++... .+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 390 v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 390 VFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGREGPRYAIEEMTEIKLVC 452 (453)
T ss_pred EEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCCCChHHHHHHhhceeEEe
Confidence 99999999999999999999999987653 467899999999999999999999999999985
|
Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. |
| >PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-93 Score=793.99 Aligned_cols=488 Identities=30% Similarity=0.452 Sum_probs=449.6
Q ss_pred ccCcccchHHhhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCCCC-eeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPANDE-HLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~tg~-~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
..|+|++....+..+.+++.++. ....+||| +...++++||+|++ ++++++.++.++++.|+++|++|++.
T Consensus 525 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~i~g----~~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Ai~aA~~A~~~ 600 (1038)
T PRK11904 525 SKGLNLNDRSELEPLAAAIAAFLEKQWQAGPIING----EGEARPVVSPADRRRVVGEVAFADAEQVEQALAAARAAFPA 600 (1038)
T ss_pred CCcccCCCHHHHHHHHHHHHHHHhcCceecceEcC----CCCeEEEECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999998888753 34567888 33348999999988 99999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELLM 159 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~ 159 (507)
|+.++.++|+++|+++++.|++++++|+.++++|+|||..++..|+..++++++||+..++...+.... ....+..++.
T Consensus 601 W~~~~~~~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~~EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~ 680 (1038)
T PRK11904 601 WSRTPVEERAAILERAADLLEANRAELIALCVREAGKTLQDAIAEVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNEL 680 (1038)
T ss_pred hccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEE
Confidence 999999999999999999999999999999999999999999999999999999999998877543211 1123667889
Q ss_pred EeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHh
Q psy3132 160 VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKL 239 (507)
Q Consensus 160 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~ 239 (507)
.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.
T Consensus 681 ~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~---g~~vg~~ 757 (1038)
T PRK11904 681 RLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGD---GATVGAA 757 (1038)
T ss_pred EEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCC---chHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985 6678999
Q ss_pred hhcCCCccEEEEeCCHHHHHHHHHhhccc---ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCccee
Q psy3132 240 LCTSPHVAGISFTGSTQVGKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL 316 (507)
Q Consensus 240 L~~~~~v~~v~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~ 316 (507)
|+.||+|++|.||||+.+|+.|.+.++.+ .+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||
T Consensus 758 Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~ 837 (1038)
T PRK11904 758 LTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLF 837 (1038)
T ss_pred HhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEE
Confidence 99999999999999999999999988765 689999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceE
Q psy3132 317 IQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTI 395 (507)
Q Consensus 317 V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptv 395 (507)
||+++||+|+++|++++++ +++|+|.+++ +++||+|++.+++++.++|+++++ |+++++||..++. .+|+|+.|||
T Consensus 838 V~~si~d~fl~~L~~~~~~-l~vGdp~d~~-t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTv 914 (1038)
T PRK11904 838 VQEDIADRVIEMLKGAMAE-LKVGDPRLLS-TDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTA 914 (1038)
T ss_pred EeHHHHHHHHHHHHHHHHh-ccCCCccccc-CCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEE
Confidence 9999999999999999999 9999999999 999999999999999999999876 8999999976532 2599999999
Q ss_pred eecCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCC--C
Q psy3132 396 LTNITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH--T 471 (507)
Q Consensus 396 l~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~ 471 (507)
+.. +++.+++||+||||++|++|+ +++|+|+++|+++|||+++|||+|.+.++++++++++|+||||+..... .
T Consensus 915 i~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~vg 992 (1038)
T PRK11904 915 FEI--DSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAVVG 992 (1038)
T ss_pred Ecc--CCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCCCC
Confidence 963 577889999999999999998 6899999999999999999999999999999999999999999876643 4
Q ss_pred CCcccCCCCCCCC-CCchHHHHHhchhceEEEecc
Q psy3132 472 EAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 472 ~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~~ 505 (507)
.+||||+|.||+| +.+|+++|++|++.|+|+++.
T Consensus 993 ~qPFGG~~~SG~G~kaGG~~~L~~f~~~ktv~~~~ 1027 (1038)
T PRK11904 993 VQPFGGQGLSGTGPKAGGPHYLLRFATEKTVTVNT 1027 (1038)
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHhceEEEEEcc
Confidence 5799999999999 679999999999999998753
|
|
| >PLN02203 aldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-92 Score=741.32 Aligned_cols=433 Identities=29% Similarity=0.428 Sum_probs=402.7
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEE 139 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 139 (507)
.+..+|+++|+++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.
T Consensus 2 ~~~~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~ 81 (484)
T PLN02203 2 EAPGETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSN 81 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999996 6999999999999988
Q ss_pred HHHhcCcc---ccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc
Q psy3132 140 ARRTYGEL---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216 (507)
Q Consensus 140 ~~~~~~~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a 216 (507)
.++..+.. .+....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.++.+++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~ 161 (484)
T PLN02203 82 LKKWMAPKKAKLPLVAFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY 161 (484)
T ss_pred HHHHhccccccCCcccCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 77664431 111123456789999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC---CCCHHHH
Q psy3132 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS---NANLQKA 293 (507)
Q Consensus 217 GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~---daDl~~a 293 (507)
+|+|++|+|+| +.++++.|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++ |||++.|
T Consensus 162 -lP~gvv~vv~g----~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~daDl~~a 235 (484)
T PLN02203 162 -LDSKAVKVIEG----GPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSRDTKVA 235 (484)
T ss_pred -CCcCEEEEEeC----CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCCCHHHH
Confidence 99999999996 567899999995 99999999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHH-hcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC
Q psy3132 294 VSGAMAAKFR-NCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372 (507)
Q Consensus 294 a~~i~~~~~~-~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 372 (507)
++.+++++|. |+||.|++++|+|||++++|+|+++|++++.+ +++|+|.++ +++||++++.+++++.+++++++.+
T Consensus 236 a~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-~~~G~p~~~--~~~Gpli~~~~~~~v~~~i~~a~~~ 312 (484)
T PLN02203 236 VNRIVGGKWGSCAGQACIAIDYVLVEERFAPILIELLKSTIKK-FFGENPRES--KSMARILNKKHFQRLSNLLKDPRVA 312 (484)
T ss_pred HHHHHHHhcccCCCCccccCCeEEEcHHHHHHHHHHHHHHHHH-hcCCCCCcC--CCcCCCCCHHHHHHHHHHHHHHHhC
Confidence 9999999996 89999999999999999999999999999999 999999874 6899999999999999999999887
Q ss_pred CCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHH
Q psy3132 373 GAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRV 452 (507)
Q Consensus 373 Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~ 452 (507)
+++++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+++|||++||||+|.+.++++
T Consensus 313 -~~~~~gg~~~~--~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 313 -ASIVHGGSIDE--KKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred -CeEEeCCCcCC--CCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 78999987532 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 453 GKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 453 ~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
++++++|.|+||++.. ..+.+||||+|.||+|+++|++++++||+.|+|++++
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGRYHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCCccccHHHHHHhcceeEEEEcC
Confidence 9999999999998754 2367899999999999999999999999999998764
|
|
| >cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-92 Score=737.25 Aligned_cols=431 Identities=39% Similarity=0.596 Sum_probs=403.0
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 145 (507)
|+++++++|++||+.|++++.++|+++|+++++.|+++.++|++++++|+|||..+++.|+..+++.++++++......+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGFNVDLAAGMLREAASLITQIIG 80 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999988989999999999999998876544
Q ss_pred ccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEE
Q psy3132 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225 (507)
Q Consensus 146 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~ 225 (507)
...+....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~ 160 (432)
T cd07105 81 GSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNV 160 (432)
T ss_pred eecccCCCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEE
Confidence 43332223556788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhc
Q psy3132 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNC 305 (507)
Q Consensus 226 v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~ 305 (507)
+++++.++.++++.|++||+++.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|+
T Consensus 161 v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~ 240 (432)
T cd07105 161 VTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNS 240 (432)
T ss_pred EeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcC
Confidence 99742123468899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc
Q psy3132 306 GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385 (507)
Q Consensus 306 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~ 385 (507)
||.|+++++||||+++||+|+++|++++.+ +++| + +++||++++.+++++.+++++++++|+++++||..+..
T Consensus 241 GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g-----~-~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~ 313 (432)
T cd07105 241 GQICMSTERIIVHESIADEFVEKLKAAAEK-LFAG-----P-VVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADES 313 (432)
T ss_pred CCCCcCCceEEEcHHHHHHHHHHHHHHHHh-hcCC-----C-CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC
Confidence 999999999999999999999999999999 9988 4 88999999999999999999999999999999986532
Q ss_pred CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcC
Q psy3132 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINE 465 (507)
Q Consensus 386 ~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~ 465 (507)
.+|+|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+
T Consensus 314 ~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~ 393 (432)
T cd07105 314 PSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHING 393 (432)
T ss_pred CCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECC
Confidence 25899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 466 GIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 466 ~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
+... .+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 394 ~~~~~~~~~PfgG~~~SG~G~~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 394 MTVHDEPTLPHGGVKSSGYGRFNGKWGIDEFTETKWITI 432 (432)
T ss_pred CCCCCCCCCCCCCcccccccccChHHHHHHhhceEEEeC
Confidence 7654 4779999999999999999999999999999863
|
Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. |
| >PRK10090 aldehyde dehydrogenase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-92 Score=729.14 Aligned_cols=407 Identities=34% Similarity=0.598 Sum_probs=384.7
Q ss_pred HHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcC
Q psy3132 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITP 172 (507)
Q Consensus 93 L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 172 (507)
|++++++|++++++|++++++|+|||..+++.|+..+++.+++++++++...+...+...++...+++++|+|||++|+|
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 80 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILP 80 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECC
Confidence 57899999999999999999999999999999999999999999999887765433322234567899999999999999
Q ss_pred CcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEe
Q psy3132 173 WNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFT 252 (507)
Q Consensus 173 ~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ft 252 (507)
||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++|+|+|+ +.+.++.|++|++++.|+||
T Consensus 81 ~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~l~~~~~v~~V~ft 157 (409)
T PRK10090 81 WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGR---GETVGQELAGNPKVAMVSMT 157 (409)
T ss_pred CchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCC---ChhHHHHHhcCCCcCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999974 56789999999999999999
Q ss_pred CCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHH
Q psy3132 253 GSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE 332 (507)
Q Consensus 253 Gs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~ 332 (507)
||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|+++
T Consensus 158 Gs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~ 237 (409)
T PRK10090 158 GSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEA 237 (409)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccccCCCCCC-CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCccccee
Q psy3132 333 ITKSFIQGDTSKN-DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVF 411 (507)
Q Consensus 333 ~~~~~~~g~~~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~f 411 (507)
+++ +++|+|.++ + +++|||+++.+++++.+++++++++|+++++||..+.. .|+|++|||+.+++++|++++||+|
T Consensus 238 ~~~-~~~G~p~~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~i~~eE~F 314 (409)
T PRK10090 238 MQA-VQFGNPAERND-IAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEG-KGYYYPPTLLLDVRQEMSIMHEETF 314 (409)
T ss_pred HHh-cCCCCCCCccc-CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCC-CCeEEecEEEeCCCCCCHHHhCCCC
Confidence 999 999999997 7 99999999999999999999999999999999976532 5899999999999999999999999
Q ss_pred eccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHH
Q psy3132 412 GPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHG 491 (507)
Q Consensus 412 gPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~ 491 (507)
|||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+........||||+|+||+|+++|.+|
T Consensus 315 gPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~~~g~~g 394 (409)
T PRK10090 315 GPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHG 394 (409)
T ss_pred CceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCccchHHH
Confidence 99999999999999999999999999999999999999999999999999999987766667999999999999999999
Q ss_pred HHhchhceEEEecc
Q psy3132 492 MEEFTQIKYMCFGN 505 (507)
Q Consensus 492 l~~~t~~k~v~~~~ 505 (507)
+++||+.|+|++.+
T Consensus 395 l~~f~~~k~v~~~~ 408 (409)
T PRK10090 395 LHEYLQTQVVYLQS 408 (409)
T ss_pred HHHhcceEEEEEec
Confidence 99999999998764
|
|
| >cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-92 Score=736.52 Aligned_cols=443 Identities=22% Similarity=0.317 Sum_probs=401.1
Q ss_pred eeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHh--hcCCHHHH----HHHHHHHHHHHHhc--
Q psy3132 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQW--SQTTPKER----GIVLKRWLKELEGN-- 103 (507)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w--~~~~~~~R----~~~L~~~a~~l~~~-- 103 (507)
+||||+|+.++..++++||+||+++++++.++.+|+++|+++|++||+.| +.++..+| .++|.++++.|+++
T Consensus 1 ~~i~g~~~~~~~~~~~~nP~t~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~ 80 (489)
T cd07126 1 NLVAGKWKGASNYTTLLDPLNGDKFISVPDTDEDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEV 80 (489)
T ss_pred CcCCCEEecCCCcEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCC
Confidence 47999999876559999999999999999999999999999999999998 55779999 89999999999999
Q ss_pred HHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc--cCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 104 KQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV--PSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 104 ~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
.++|++++++|+|||+.+++.|+..+++.+++|++.+.+..+... +....+...+++++|+|||++|+|||||+.+.+
T Consensus 81 ~~~la~~~~~e~GK~~~~a~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~ 160 (489)
T cd07126 81 EDFFARLIQRVAPKSDAQALGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPA 160 (489)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHHHH
Confidence 599999999999999999999999999999999988877655332 222235567899999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++..|.+++.++|+|+|++|+|+|+ +.+ +..|+.|+++++|+||||+.+|+.|
T Consensus 161 ~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~G~---~~~-~~~l~~~~~v~~V~FTGS~~vGr~i 236 (489)
T cd07126 161 LQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIHSD---GPT-MNKILLEANPRMTLFTGSSKVAERL 236 (489)
T ss_pred HHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEeCC---chh-HHHHhcCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999974 344 5568889999999999999999999
Q ss_pred HHhhcccccccccccCCCCcEEEcCCC-CHHHHHHHHHHHHHHhcCCCcccCcceechhhh-HHHHHHHHHHHHHhcccc
Q psy3132 262 YSHCSQGIKRLSLELGGNAPFIVYSNA-NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQ 339 (507)
Q Consensus 262 ~~~~~~~~~~~~lelgG~~~~iV~~da-Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~~ 339 (507)
...++ +++.+|+|||||+||++|| |++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|++.+.+ +++
T Consensus 237 ~~~~g---~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~-~~~ 312 (489)
T cd07126 237 ALELH---GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKALAEQ-RKL 312 (489)
T ss_pred HHHhC---CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchHHHHHHHHHHHHHh-ccc
Confidence 98876 6789999999999999999 999999999999999999999999999999995 68999999999999 888
Q ss_pred CCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccC---CC-ceeeceEeec------CCCCCCCccc
Q psy3132 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKL---GS-KFFAPTILTN------ITPDMLCYTE 408 (507)
Q Consensus 340 g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~---~g-~~~~Ptvl~~------~~~~~~i~~~ 408 (507)
|+ +++||++++. .+++.++++++++ +|+++++||..++.. ++ .|++|||+.. ++++|++++|
T Consensus 313 g~------~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~e 385 (489)
T cd07126 313 ED------LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTT 385 (489)
T ss_pred CC------CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhC
Confidence 74 6799999998 9999999999998 899999999764321 23 3899999952 5789999999
Q ss_pred ceeeccEEeEecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceee--EEEcCCCCCCCC----CcccCCCC
Q psy3132 409 EVFGPVAVCIKFKT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM--VGINEGIISHTE----AAFGGVKE 480 (507)
Q Consensus 409 E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~--v~iN~~~~~~~~----~pfGG~~~ 480 (507)
|+||||++|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||+|.
T Consensus 386 EiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~ 465 (489)
T cd07126 386 EVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRG 465 (489)
T ss_pred CCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcc
Confidence 99999999999999 89999999999999999999999999999999999999 668887765433 99999999
Q ss_pred CCCCCCchH
Q psy3132 481 SGLGREGSR 489 (507)
Q Consensus 481 SG~g~~~g~ 489 (507)
||+|+++..
T Consensus 466 sg~g~~~~~ 474 (489)
T cd07126 466 AGIGTPEAI 474 (489)
T ss_pred cCCCCHhHH
Confidence 999997554
|
Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. |
| >cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-92 Score=734.62 Aligned_cols=426 Identities=29% Similarity=0.463 Sum_probs=397.4
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 145 (507)
|++.++++|++|++.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.++++++......+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~ 80 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLWEAQTEVAAMAGKIDISIKAYHERTG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999888776655
Q ss_pred ccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEE
Q psy3132 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNV 225 (507)
Q Consensus 146 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~ 225 (507)
..... ..+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+
T Consensus 81 ~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~ 159 (431)
T cd07095 81 ERATP-MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNL 159 (431)
T ss_pred CcccC-CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheE
Confidence 43221 23557789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc-ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 226 VTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 226 v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~-~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
|++ +.+.++.|++|+++|.|.||||+.+|+.|++.++.+ .+++++|+|||||+||++|||++.|++.+++++|.|
T Consensus 160 v~g----~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~ 235 (431)
T cd07095 160 VQG----GRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLT 235 (431)
T ss_pred EeC----cHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHh
Confidence 996 356789999999999999999999999999987654 699999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc
Q psy3132 305 CGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 383 (507)
+||.|++++|||||++ ++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++|+++++||...
T Consensus 236 ~GQ~C~a~~rv~V~~~~i~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~ 313 (431)
T cd07095 236 AGQRCTCARRLIVPDGAVGDAFLERLVEAAKR-LRIGAPDAEP-PFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERL 313 (431)
T ss_pred CCCCCCCCeEEEEcCcchHHHHHHHHHHHHHh-CCCCCCCCCC-CCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcC
Confidence 9999999999999999 999999999999999 9999999998 999999999999999999999999999999999754
Q ss_pred ccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEE
Q psy3132 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463 (507)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~i 463 (507)
+. +|+|++|||+ ++++++++++||+||||++|++|+|.+|||+++|+++|||++||||+|.+.++++++++++|+|+|
T Consensus 314 ~~-~g~~~~Ptv~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~i 391 (431)
T cd07095 314 VA-GTAFLSPGII-DVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNW 391 (431)
T ss_pred CC-CCeEEcCEEE-ecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEE
Confidence 33 6899999999 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 464 NEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 464 N~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|+.... .+.+||||+|.||+|+++|++|+++|+ .|++
T Consensus 392 N~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~~~-~~~~ 429 (431)
T cd07095 392 NRPTTGASSTAPFGGVGLSGNHRPSAYYAADYCA-YPVA 429 (431)
T ss_pred CCCCCCCCCCCCCCCcccccCCCCChHHHHHHHh-hhhc
Confidence 986653 456899999999999999999999554 4544
|
N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. |
| >cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-91 Score=733.58 Aligned_cols=429 Identities=41% Similarity=0.681 Sum_probs=406.1
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcC
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYG 145 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~ 145 (507)
|+++++++|++|++.|++++.++|.++|+++++.|++++++|++++++|+|||..++..|+..+++.+++++..+.+..+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~ei~~~~~~l~~~~~~~~~~~~ 80 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAFEVGAAIAILREAAGLPRRPEG 80 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999988776655
Q ss_pred ccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHH-HHHHHHHHHHcCCCCCcEE
Q psy3132 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT-ALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 146 ~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~-~~~l~~~l~~aGlP~gvv~ 224 (507)
...+....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.+ +..+.+++.++|+|+|++|
T Consensus 81 ~~~~~~~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~ 160 (431)
T cd07104 81 EILPSDVPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLN 160 (431)
T ss_pred ccccCCCCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEE
Confidence 443332245677899999999999999999999999999999999999999999999998 5689999999999999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
+++++ +.++++.|+.|++++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 161 ~v~g~---~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 237 (431)
T cd07104 161 VVPGG---GSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLH 237 (431)
T ss_pred EeeCC---chhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 99974 567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 384 (507)
+||.|+++++||||++++|+|+++|++++.+ +++|+|.+++ +++||++++.+++++.+++++++.+|+++++||..
T Consensus 238 ~GQ~C~a~~~v~v~~~i~~~f~~~l~~~~~~-~~~g~~~~~~-~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~-- 313 (431)
T cd07104 238 QGQICMAAGRILVHESVYDEFVEKLVAKAKA-LPVGDPRDPD-TVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY-- 313 (431)
T ss_pred CCCCcccCcEEEEcHHHHHHHHHHHHHHHHh-cCcCCCCCCC-CccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC--
Confidence 9999999999999999999999999999999 9999999998 99999999999999999999999999999999864
Q ss_pred cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc
Q psy3132 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN 464 (507)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN 464 (507)
+|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 314 --~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN 391 (431)
T cd07104 314 --EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHIN 391 (431)
T ss_pred --CCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEEC
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 465 EGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 465 ~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
++... .+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 392 ~~~~~~~~~~pfgG~~~SG~g~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 392 DQTVNDEPHVPFGGVKASGGGRFGGPASLEEFTEWQWITV 431 (431)
T ss_pred CCCCCCCCCCCCCCcccccCCccchHHHHHHhhceeEEeC
Confidence 98764 3679999999999999999999999999999853
|
ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. |
| >cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-92 Score=730.31 Aligned_cols=427 Identities=30% Similarity=0.482 Sum_probs=397.7
Q ss_pred CCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHH
Q psy3132 62 MGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEA 140 (507)
Q Consensus 62 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~ 140 (507)
.+.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||+.+++ .|+..+++.+++++..+
T Consensus 2 ~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~ 81 (436)
T cd07135 2 TPLDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNL 81 (436)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999997 59999999999999987
Q ss_pred HHhcCcc-ccCC---CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc
Q psy3132 141 RRTYGEL-VPSP---VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216 (507)
Q Consensus 141 ~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a 216 (507)
+...... .... ..+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~- 160 (436)
T cd07135 82 KKWAKDEKVKDGPLAFMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK- 160 (436)
T ss_pred HHhhCCcccCCcccccCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-
Confidence 7654322 1110 1234578899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHH
Q psy3132 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296 (507)
Q Consensus 217 GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~ 296 (507)
|+|+|++|+++|+ +.+. ..|+.|+ +|.|.||||+.+|+.|++.++.++||+++|+|||||+||++|||++.|++.
T Consensus 161 ~lP~g~v~vv~g~---~~~~-~~l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl~~aa~~ 235 (436)
T cd07135 161 YLDPDAFQVVQGG---VPET-TALLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADLELAAKR 235 (436)
T ss_pred hCCcCEEEEEcCC---chhH-HHHHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCHHHHHHH
Confidence 6999999999974 4444 4588999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeE
Q psy3132 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376 (507)
Q Consensus 297 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 376 (507)
+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+| +++ +++||++++.+++++.++++++ |+++
T Consensus 236 i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p-~~~-~~~gpli~~~~~~~i~~~v~~a---g~~v 309 (436)
T cd07135 236 ILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDE-FYPGGA-NAS-PDYTRIVNPRHFNRLKSLLDTT---KGKV 309 (436)
T ss_pred HHHHHhccCCceecCCCEEeccHHHHHHHHHHHHHHHHH-hcCCCC-CCC-CCcCCCCCHHHHHHHHHHHHhc---CCeE
Confidence 999999999999999999999999999999999999999 999999 888 9999999999999999999986 8899
Q ss_pred EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q psy3132 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456 (507)
Q Consensus 377 ~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 456 (507)
++||.... +|+|++|||+.+++++++++++|+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 310 ~~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l 387 (436)
T cd07135 310 VIGGEMDE--ATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRT 387 (436)
T ss_pred EECCCcCC--CCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcC
Confidence 99997653 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEcCCCCC--CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 457 QVGMVGINEGIIS--HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 457 ~~G~v~iN~~~~~--~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
++|+|+||+.... .+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 388 ~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 388 RSGGVVINDTLIHVGVDNAPFGGVGDSGYGAYHGKYGFDTFTHERTVV 435 (436)
T ss_pred CcCeEEECCccccccCCCCCcCCcCcccCCccccHhHHHHhccccccc
Confidence 9999999987643 467999999999999999999999999999873
|
Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. |
| >PTZ00381 aldehyde dehydrogenase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=735.38 Aligned_cols=431 Identities=29% Similarity=0.447 Sum_probs=398.4
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEE 139 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 139 (507)
..+.+|++.++++|++||+.|+.++.++|.++|++++++|++++++|++++++|+|||..|+. .|+..+++.++++++.
T Consensus 3 ~~~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~ 82 (493)
T PTZ00381 3 PDNPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKH 82 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 358899999999999999999999999999999999999999999999999999999999996 5999999999999887
Q ss_pred HHHhcCcc-ccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc
Q psy3132 140 ARRTYGEL-VPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216 (507)
Q Consensus 140 ~~~~~~~~-~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a 216 (507)
.++..... ... .......+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++.++.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~ 162 (493)
T PTZ00381 83 LDEYLKPEKVDTVGVFGPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY 162 (493)
T ss_pred HHHHhCCcccCCccccCCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh
Confidence 76653321 111 112345788999999999999999999999999999999999999999999999999999999996
Q ss_pred CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHH
Q psy3132 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296 (507)
Q Consensus 217 GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~ 296 (507)
+|+|++++|+| +.+.+..|+.|+ +|.|+||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.
T Consensus 163 -lp~~~v~vv~g----~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~ 236 (493)
T PTZ00381 163 -LDPSYVRVIEG----GVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNLKVAARR 236 (493)
T ss_pred -CCcCEEEEecC----CHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCHHHHHHH
Confidence 99999999996 467888899987 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeE
Q psy3132 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376 (507)
Q Consensus 297 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 376 (507)
+++++|.|+||.|+++++||||++++|+|+++|++.+++ +. |++.+++ +++||+++..+++++.++++ ++|+++
T Consensus 237 i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~~~l~~~~~~-~~-g~~~~~~-~~~gpli~~~~~~ri~~~i~---~~ga~~ 310 (493)
T PTZ00381 237 IAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKE-FF-GEDPKKS-EDYSRIVNEFHTKRLAELIK---DHGGKV 310 (493)
T ss_pred HHHHHHhhcCCcCCCCCEEEEeHHHHHHHHHHHHHHHHH-Hh-CCCCccC-CCcCCCCCHHHHHHHHHHHH---hCCCcE
Confidence 999999999999999999999999999999999999998 75 6666677 99999999999999999996 379999
Q ss_pred EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q psy3132 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456 (507)
Q Consensus 377 ~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 456 (507)
++||..+. +++|+.|||+.++++++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 311 ~~gG~~~~--~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~ 388 (493)
T PTZ00381 311 VYGGEVDI--ENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENT 388 (493)
T ss_pred EECCCcCC--CCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhC
Confidence 99997642 5889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 457 QVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 457 ~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
++|.|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 389 ~sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 389 SSGAVVINDCVFHLLNPNLPFGGVGNSGMGAYHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred CcceEEECCccccccCCCCCCCCcCcccccccchHHHHHhccceeEEEEcc
Confidence 999999998764 3478999999999999999999999999999998763
|
|
| >cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-91 Score=723.90 Aligned_cols=423 Identities=29% Similarity=0.449 Sum_probs=392.1
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCcc
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGEL 147 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 147 (507)
+++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.+++++....+..+..
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 82 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPE 82 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999999986 599999999999998876644321
Q ss_pred ---ccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 148 ---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 148 ---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
.+........+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+++++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~ 161 (432)
T cd07137 83 KVKTPLTTFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIK 161 (432)
T ss_pred ccCCCcccCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 111112335678999999999999999999999999999999999999999999999999999999995 9999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHH-H
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF-R 303 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~-~ 303 (507)
+++| +.+.++.|+.| .++.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++| +
T Consensus 162 ~v~g----~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~ 236 (432)
T cd07137 162 VIEG----GVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC 236 (432)
T ss_pred EEeC----CHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhc
Confidence 9997 34678889887 5999999999999999999999999999999999999999999999999999999999 5
Q ss_pred hcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc
Q psy3132 304 NCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383 (507)
Q Consensus 304 ~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 383 (507)
|+||.|++++|+|||++++|+|+++|++++.+ +++|+|. ++ +++||++++.+++++.+++++++. |+++++||...
T Consensus 237 ~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~-~~-~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~~ 312 (432)
T cd07137 237 NNGQACIAPDYVLVEESFAPTLIDALKNTLEK-FFGENPK-ES-KDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGERD 312 (432)
T ss_pred cCCCcccCCCEEEEcHHHHHHHHHHHHHHHHH-HhCCCCC-cc-CCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCcC
Confidence 99999999999999999999999999999999 9999994 56 899999999999999999999998 89999999753
Q ss_pred ccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEE
Q psy3132 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463 (507)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~i 463 (507)
. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 313 ~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~i 390 (432)
T cd07137 313 E--KNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTF 390 (432)
T ss_pred C--CCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEE
Confidence 2 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--CCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 464 NEGIIS--HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 464 N~~~~~--~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|++... .+.+||||+|.||+|+++|.+++++||+.|+|++
T Consensus 391 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 391 NDTVVQYAIDTLPFGGVGESGFGAYHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CCccccccCCCCCCCCcCcCcCCccccHHHHHHhccCceeeC
Confidence 987653 3678999999999999999999999999999863
|
Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. |
| >cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-91 Score=725.34 Aligned_cols=420 Identities=28% Similarity=0.448 Sum_probs=390.8
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCc-
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGE- 146 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 146 (507)
+.+++|++||+.|+.+++.+|+++|++++++|++++++|++++++|+|||..+++ .|+..+++.++++++.++...+.
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPK 81 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4688999999999999999999999999999999999999999999999999997 59999999999999988776443
Q ss_pred cccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 147 LVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 147 ~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
..... ..+...+++++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~ 160 (449)
T cd07136 82 RVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVA 160 (449)
T ss_pred ccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEE
Confidence 22211 12446788999999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
+|+| +.+.+..|+.|+ ++.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||+|.|++.+++++|.|
T Consensus 161 ~v~g----~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~ 235 (449)
T cd07136 161 VVEG----GVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLN 235 (449)
T ss_pred EEeC----ChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcc
Confidence 9997 345678888775 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 384 (507)
+||.|++++|||||+++||+|+++|++++++ ++.|+|.+ + +++||++++.+++++.+++++ +++++||..+.
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-~~~g~p~~-~-~~~gpli~~~~~~~i~~~i~~-----a~~~~gG~~~~ 307 (449)
T cd07136 236 AGQTCVAPDYVLVHESVKEKFIKELKEEIKK-FYGEDPLE-S-PDYGRIINEKHFDRLAGLLDN-----GKIVFGGNTDR 307 (449)
T ss_pred cCCcccCCCEEEEcHHHHHHHHHHHHHHHHH-hcCCCCCC-C-CCccCcCCHHHHHHHHHHHhc-----ceEEECCCcCC
Confidence 9999999999999999999999999999999 99999987 6 899999999999999999986 38999997642
Q ss_pred cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc
Q psy3132 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN 464 (507)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN 464 (507)
+|+|+.|||+.++++++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 308 --~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN 385 (449)
T cd07136 308 --ETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCIN 385 (449)
T ss_pred --CCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 465 EGIIS--HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 465 ~~~~~--~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+.... .+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k~v~~~ 427 (449)
T cd07136 386 DTIMHLANPYLPFGGVGNSGMGSYHGKYSFDTFSHKKSILKK 427 (449)
T ss_pred CccccccCCCCCccCcCcccCCcccCHHHHHHhccceEEEEc
Confidence 87643 36789999999999999999999999999999876
|
Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. |
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-90 Score=778.58 Aligned_cols=474 Identities=27% Similarity=0.425 Sum_probs=436.5
Q ss_pred cCcccchHHhhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHh
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQW 81 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w 81 (507)
.|+|++.+.....+..++.... ....+|+|+. ..+..++++||+| ++++++++.++.+|++.|+++|++|++.|
T Consensus 620 ~g~d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~v~nPa~~~~~vg~v~~a~~~dv~~Av~aA~~A~~~W 698 (1318)
T PRK11809 620 AGLDLANEHRLASLSSALLASAHQKWQAAPMLEDPV-AAGEMSPVINPADPRDIVGYVREATPAEVEQALESAVNAAPIW 698 (1318)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHcCCcccCCcccCcC-CCCCEEEeECCCCCCeeEEEEeCCCHHHHHHHHHHHHHHHHHH
Confidence 6999999999888888886642 3345677742 2233489999998 88999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe
Q psy3132 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR 161 (507)
Q Consensus 82 ~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (507)
+.+|+++|+++|++++++|++++++|+.++++|+|||..++..||..++++++||+..++.... ...+
T Consensus 699 ~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~~EV~eaidflryyA~~a~~~~~------------~~~~ 766 (1318)
T PRK11809 699 FATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIAEVREAVDFLRYYAGQVRDDFD------------NDTH 766 (1318)
T ss_pred hcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------Ccee
Confidence 9999999999999999999999999999999999999999999999999999999988764211 2458
Q ss_pred ecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh
Q psy3132 162 EPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC 241 (507)
Q Consensus 162 ~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~ 241 (507)
+|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|+ +.++++.|+
T Consensus 767 ~PlGVV~~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~---g~~vg~~Lv 843 (1318)
T PRK11809 767 RPLGPVVCISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGR---GETVGAALV 843 (1318)
T ss_pred ecccEEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCC---cHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999985 677899999
Q ss_pred cCCCccEEEEeCCHHHHHHHHHhhcccc------cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcce
Q psy3132 242 TSPHVAGISFTGSTQVGKILYSHCSQGI------KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRF 315 (507)
Q Consensus 242 ~~~~v~~v~ftGs~~~g~~i~~~~~~~~------~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v 315 (507)
.||+|++|+||||+.+|+.|.+.+++++ +|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++|
T Consensus 844 ~~p~V~~V~FTGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl 923 (1318)
T PRK11809 844 ADARVRGVMFTGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVL 923 (1318)
T ss_pred cCCCcCEEEEeCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEE
Confidence 9999999999999999999999988775 7999999999999999999999999999999999999999999999
Q ss_pred echhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeec
Q psy3132 316 LIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAP 393 (507)
Q Consensus 316 ~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~P 393 (507)
|||++++|+|++.|++++++ +++|+|.+.+ +++||+|++.+++++.++|++++++|++++.||..... ..|+|+.|
T Consensus 924 ~V~e~Iad~fl~~L~~a~~~-l~vGdP~~~~-tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~P 1001 (1318)
T PRK11809 924 CLQDDVADRTLKMLRGAMAE-CRMGNPDRLS-TDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPP 1001 (1318)
T ss_pred EEcHHHHHHHHHHHHHHHHh-cCCCCccccc-CCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEee
Confidence 99999999999999999999 9999999999 99999999999999999999999999999988754321 25999999
Q ss_pred eEeecCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCC-
Q psy3132 394 TILTNITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH- 470 (507)
Q Consensus 394 tvl~~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~- 470 (507)
||+.. +++.++++|+||||++|++|+ ++||+|+++|+++|||+++|||+|.+.++++++++++|+||||+.....
T Consensus 1002 TIi~~--~~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gav 1079 (1318)
T PRK11809 1002 TLIEL--DSFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAV 1079 (1318)
T ss_pred EEEec--cchhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCC
Confidence 99974 567889999999999999996 7999999999999999999999999999999999999999999876543
Q ss_pred -CCCcccCCCCCCCCC-CchHHHHHhchhceE
Q psy3132 471 -TEAAFGGVKESGLGR-EGSRHGMEEFTQIKY 500 (507)
Q Consensus 471 -~~~pfGG~~~SG~g~-~~g~~~l~~~t~~k~ 500 (507)
..+||||+|.||+|. .+|++++..|++.+.
T Consensus 1080 vg~qPFGG~g~SG~G~kaGGp~yL~~f~~~~~ 1111 (1318)
T PRK11809 1080 VGVQPFGGEGLSGTGPKAGGPLYLYRLLATRP 1111 (1318)
T ss_pred cCCCCCCCcCcCCCCCCCCCHHHHHHHhccCC
Confidence 457999999999995 699999999999874
|
|
| >cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-90 Score=717.22 Aligned_cols=423 Identities=29% Similarity=0.445 Sum_probs=389.9
Q ss_pred HHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC-hhhhh-HhHHHHHHHHHHHHHHHHHhcCcc
Q psy3132 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESL-GEVVYANSFVDWFSEEARRTYGEL 147 (507)
Q Consensus 70 av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~-~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 147 (507)
.+++|++||+.|+++++.+|.++|+++++.|++++++|++++++|+||+ ..++. .|+..+++.++++++.+.......
T Consensus 3 ~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~ 82 (434)
T cd07133 3 LLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPS 82 (434)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999985 56774 699999999999998876644322
Q ss_pred c-cC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 148 V-PS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 148 ~-~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
. .. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~ 161 (434)
T cd07133 83 RRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVA 161 (434)
T ss_pred ccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEE
Confidence 1 11 112445788999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
+++| +.++++.|+.|+ +|.|+||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 162 ~v~g----~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~ 236 (434)
T cd07133 162 VVTG----GADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLN 236 (434)
T ss_pred EEeC----ChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhcc
Confidence 9997 356788888776 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 384 (507)
+||.|++++|||||++++|+|+++|++++++ +++|+ +++ +++||++++.+++++.+++++++++|+++++||....
T Consensus 237 ~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~-~~~g~--~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~ 312 (434)
T cd07133 237 AGQTCVAPDYVLVPEDKLEEFVAAAKAAVAK-MYPTL--ADN-PDYTSIINERHYARLQGLLEDARAKGARVIELNPAGE 312 (434)
T ss_pred CCCcccCCCEEEEcHHHHHHHHHHHHHHHHH-hcCCC--CCC-CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCc
Confidence 9999999999999999999999999999999 88886 355 8899999999999999999999999999999997542
Q ss_pred c-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEE
Q psy3132 385 K-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463 (507)
Q Consensus 385 ~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~i 463 (507)
. .+|+|++|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 313 ~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~i 392 (434)
T cd07133 313 DFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTI 392 (434)
T ss_pred CCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 1 258999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 464 NEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 464 N~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 393 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 393 NDTLLHVAQDDLPFGGVGASGMGAYHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CCcccccCCCCCCcCCCCcccCCCcCCHHHHHHhcccceec
Confidence 98764 3477999999999999999999999999999874
|
Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-90 Score=777.62 Aligned_cols=479 Identities=29% Similarity=0.430 Sum_probs=441.1
Q ss_pred ccCcccchHHhhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
..|+|++....+..+.+++..+. ....+|+|+... +..++++||+| ++++++++.++.+++++|+++|++|++.
T Consensus 527 ~~~~~~~~~~~~~~l~~al~~~~~~~~~~~~~i~g~~~~-~~~~~v~nP~~~~~~vg~v~~a~~~~v~~Av~aA~~A~~~ 605 (1208)
T PRK11905 527 SKGLDLSDEATLAALDEALNAFAAKTWHAAPLLAGGDVD-GGTRPVLNPADHDDVVGTVTEASAEDVERALAAAQAAFPE 605 (1208)
T ss_pred CCCccCCCHHHHHHHHHHHHHHHccCeeecceecccccc-CCeeeEECCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 46999999999999888887643 234567776553 33489999999 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (507)
|+.++.++|+++|+++++.|++++++|+.++++|+||+..++..|+..++++++||+..++...+ ...
T Consensus 606 W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~~Ev~eaid~lr~ya~~a~~~~~------------~~~ 673 (1208)
T PRK11905 606 WSATPAAERAAILERAADLMEAHMPELFALAVREAGKTLANAIAEVREAVDFLRYYAAQARRLLN------------GPG 673 (1208)
T ss_pred hhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC------------Cce
Confidence 99999999999999999999999999999999999999999999999999999999998765432 135
Q ss_pred eecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhh
Q psy3132 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL 240 (507)
Q Consensus 161 ~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L 240 (507)
++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+|+|+ +.++++.|
T Consensus 674 ~~P~GVv~~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~---g~~vg~~L 750 (1208)
T PRK11905 674 HKPLGPVVCISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGD---GRTVGAAL 750 (1208)
T ss_pred ecCccEEEEEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCC---chHHHHHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999985 56799999
Q ss_pred hcCCCccEEEEeCCHHHHHHHHHhhccc---ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceec
Q psy3132 241 CTSPHVAGISFTGSTQVGKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI 317 (507)
Q Consensus 241 ~~~~~v~~v~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V 317 (507)
+.||+|++|.||||+.+|+.|.+.++.+ .+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++|||
T Consensus 751 v~~p~v~~V~FTGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V 830 (1208)
T PRK11905 751 VADPRIAGVMFTGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCL 830 (1208)
T ss_pred HcCCCcCEEEEeCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEE
Confidence 9999999999999999999999998876 4899999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEee
Q psy3132 318 QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILT 397 (507)
Q Consensus 318 ~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~ 397 (507)
|++++|+|+++|++++++ +++|+|.+.+ +++||+|++.+++++.++|++++.+|+.++.|+......+|+|+.|||+.
T Consensus 831 ~~si~d~f~e~L~~~~~~-l~vGdP~d~~-t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~ 908 (1208)
T PRK11905 831 QEDVADRVLTMLKGAMDE-LRIGDPWRLS-TDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE 908 (1208)
T ss_pred ehhHHHHHHHHHHHHHHH-hcCCCchhcc-CCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe
Confidence 999999999999999999 9999999998 99999999999999999999999999988877643221259999999997
Q ss_pred cCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCC--CCC
Q psy3132 398 NITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISH--TEA 473 (507)
Q Consensus 398 ~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~--~~~ 473 (507)
. +++.++++|+||||++|++|+ ++||+|+++|+++|||+++|||+|.+.++++.+++++|+||||+..... ..+
T Consensus 909 ~--~~~~~~~eEiFGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~q 986 (1208)
T PRK11905 909 I--DSISDLEREVFGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQ 986 (1208)
T ss_pred c--CChHHhcCCccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCC
Confidence 3 578899999999999999997 6999999999999999999999999999999999999999999876643 457
Q ss_pred cccCCCCCCCCC-CchHHHHHhchhceEEEec
Q psy3132 474 AFGGVKESGLGR-EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 474 pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.||+|. .+|+++|.+|++.|++++.
T Consensus 987 PFGG~~~SG~G~kaGGp~~L~~f~~~k~v~~~ 1018 (1208)
T PRK11905 987 PFGGEGLSGTGPKAGGPLYLGRLVREAPTPIP 1018 (1208)
T ss_pred CCCCCCCCCCCCcCCCHHHHHHHhhcceeecc
Confidence 999999999995 8999999999999998753
|
|
| >cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-89 Score=711.36 Aligned_cols=424 Identities=31% Similarity=0.477 Sum_probs=395.3
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCc-
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGE- 146 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~- 146 (507)
+++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.+++++.........
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPK 81 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5788999999999999999999999999999999999999999999999999996 79999999999998876554332
Q ss_pred cc--cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 147 LV--PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 147 ~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
.. +....+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++.++.+++.++ +|+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~ 160 (433)
T cd07134 82 RVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVA 160 (433)
T ss_pred ccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEE
Confidence 11 11123456789999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
++++ +.+.+..|++|+ ++.|.||||+.+|+.|++.++++++|+++|+|||||+||++|||++.|++.+++++|.+
T Consensus 161 ~v~g----~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~ 235 (433)
T cd07134 161 VFEG----DAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLN 235 (433)
T ss_pred EEeC----ChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcC
Confidence 9997 346788999998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC-CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT-SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 383 (507)
+||.|+++++||||++++|+|+++|++++++ ++.|+| .+++ +++||++++.+++++.+++++++++|+++++||..+
T Consensus 236 ~GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~-~~~~~~~~~~~-~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~ 313 (433)
T cd07134 236 AGQTCIAPDYVFVHESVKDAFVEHLKAEIEK-FYGKDAARKAS-PDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD 313 (433)
T ss_pred cCCcccCCcEEEECHHHHHHHHHHHHHHHHH-HcCCCCCcCCC-CccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC
Confidence 9999999999999999999999999999999 888887 7777 999999999999999999999999999999999764
Q ss_pred ccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEE
Q psy3132 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463 (507)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~i 463 (507)
. +|+|++|||+.++++++++++||+||||++|++|+|.||+|+++|+++|||++||||+|.+.++++++++++|.|+|
T Consensus 314 ~--~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~i 391 (433)
T cd07134 314 A--AQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVV 391 (433)
T ss_pred C--CCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEE
Confidence 2 58999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC--CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 464 NEGIIS--HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 464 N~~~~~--~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
|+.+.. .+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 392 N~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 392 NDVVLHFLNPNLPFGGVNNSGIGSYHGVYGFKAFSHERAVL 432 (433)
T ss_pred CCcccccCCCCCCCCCcCcccCCCcCcHHHHHHhcccceee
Confidence 987653 467899999999999999999999999999874
|
Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. |
| >cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-88 Score=708.14 Aligned_cols=421 Identities=28% Similarity=0.432 Sum_probs=387.4
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCcc
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGEL 147 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 147 (507)
+|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++.++......
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~ 81 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPE 81 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 5889999999999999999999999999999999999999999999999999996 699999999999998877654322
Q ss_pred ccCC---CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 148 VPSP---VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 148 ~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
.... ......++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~ 160 (443)
T cd07132 82 PVKKNLATLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYP 160 (443)
T ss_pred cCCCccccCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEE
Confidence 1111 12345788999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
+++++ + +....|+. +++|.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 161 vv~g~---~-~~~~~l~~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~ 235 (443)
T cd07132 161 VVLGG---V-EETTELLK-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFIN 235 (443)
T ss_pred EEeCC---H-HHHHHHHh-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhc
Confidence 99973 3 34556765 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 384 (507)
+||.|++++|||||++++|+|+++|++.+++ ++.|+| +++ +++||++++.+++++.+++++ +++++||..+.
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~~-~~~-~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~~ 307 (443)
T cd07132 236 AGQTCIAPDYVLCTPEVQEKFVEALKKTLKE-FYGEDP-KES-PDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTDE 307 (443)
T ss_pred CCCceeCCcEEEEcHHHHHHHHHHHHHHHHH-hcCCCC-Ccc-cccCCcCCHHHHHHHHHHHhC-----CEEEeCCccCC
Confidence 9999999999999999999999999999999 888888 566 899999999999999999873 58999997642
Q ss_pred cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc
Q psy3132 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN 464 (507)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN 464 (507)
+++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+.++++++++|.|+||
T Consensus 308 --~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 308 --KERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred --CCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC--CCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 465 EGIIS--HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 465 ~~~~~--~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
++... .+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~~ 428 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMGAYHGKYSFDTFSHKRSCLVKS 428 (443)
T ss_pred CcccccCCCCCCCCCCCcccCCCcccHHHHHHhccccEEEEcc
Confidence 87643 367899999999999999999999999999998764
|
NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. |
| >cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-87 Score=694.45 Aligned_cols=418 Identities=30% Similarity=0.498 Sum_probs=385.4
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCcc
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGEL 147 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~ 147 (507)
+++++|++||+.|+.+|+.+|+++|++++++|++++++|++++++|+|||..++. .|+..+++.++++++.++...+..
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~ 81 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPR 81 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4889999999999999999999999999999999999999999999999987775 599999999999988776554321
Q ss_pred -c--cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEE
Q psy3132 148 -V--PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLN 224 (507)
Q Consensus 148 -~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~ 224 (507)
. .....+...+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.+++++|.+ |+|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~ 160 (426)
T cd07087 82 RVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVA 160 (426)
T ss_pred ccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEE
Confidence 1 1111234678899999999999999999999999999999999999999999999999999999999 69999999
Q ss_pred EEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHh
Q psy3132 225 VVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRN 304 (507)
Q Consensus 225 ~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~ 304 (507)
+++|+ .+.+..|+.|+ ++.|.||||+.+|+.|.+.+++++||+++|+|||||+||++|||++.|++.+++++|.|
T Consensus 161 vv~g~----~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~ 235 (426)
T cd07087 161 VVEGG----VEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLN 235 (426)
T ss_pred EEeCC----chHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhc
Confidence 99973 45688899998 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc
Q psy3132 305 CGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 384 (507)
+||.|+++++||||++++|+|+++|++++++ ++.|+|. ++ +++||++++.+++++.++++++ ++++||....
T Consensus 236 ~GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~-l~~~~~~-~~-~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~~ 307 (426)
T cd07087 236 AGQTCIAPDYVLVHESIKDELIEELKKAIKE-FYGEDPK-ES-PDYGRIINERHFDRLASLLDDG-----KVVIGGQVDK 307 (426)
T ss_pred cCCccccCCEEEEcHHHHHHHHHHHHHHHHH-HcCCCCc-cC-CCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccCC
Confidence 9999999999999999999999999999999 8766664 56 8999999999999999999854 8999997642
Q ss_pred cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc
Q psy3132 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN 464 (507)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN 464 (507)
+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||
T Consensus 308 --~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN 385 (426)
T cd07087 308 --EERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVN 385 (426)
T ss_pred --CCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEEC
Confidence 589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 465 EGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 465 ~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
++.. ..+.+||||+|.||+|+++|.+++++||+.|+|.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 386 DVLLHAAIPNLPFGGVGNSGMGAYHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CcccccCCCCCCCCCCCcccCCCccCHHHHHHhccceeec
Confidence 8764 3478999999999999999999999999999874
|
ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. |
| >cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-84 Score=677.53 Aligned_cols=420 Identities=23% Similarity=0.348 Sum_probs=378.0
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhc--
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY-- 144 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~-- 144 (507)
+++|+++|++|++.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++..++...
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~ev~~~~~~l~~~a~~~~~~~~~ 80 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQGELGRTTGQLRLFADLVREGSWL 80 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 478999999999999999999999999999999999999999999999999999999999999999999998776432
Q ss_pred CccccCC------CCCceeEEEeecccEEEEEcCCcccHHh--HHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHH---
Q psy3132 145 GELVPSP------VKSKELLMVREPLGVVGLITPWNFPMAM--ITRKVAPALAAGCTCVIKPAEDTPLTALALAALA--- 213 (507)
Q Consensus 145 ~~~~~~~------~~~~~~~~~~~P~Gvv~~i~p~n~P~~~--~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l--- 213 (507)
+...... .++...+.+++|+|||++|+|||||+.+ .++++++||++||+||+|||+.+|.++.++.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~ 160 (454)
T cd07129 81 DARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAA 160 (454)
T ss_pred cccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 2111110 1123457889999999999999999988 4589999999999999999999999999988876
Q ss_pred -HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc--cccccccccCCCCcEEEcCCC--
Q psy3132 214 -HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ--GIKRLSLELGGNAPFIVYSNA-- 288 (507)
Q Consensus 214 -~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~--~~~~~~lelgG~~~~iV~~da-- 288 (507)
.++|+|+|++|+|+|+ +.+.++.|++|+.|+.|+||||+.+|+.|++.+++ ++||+++|+|||||+||++|+
T Consensus 161 l~~aGlP~gvv~~v~g~---~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~ 237 (454)
T cd07129 161 LRATGLPAGVFSLLQGG---GREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALA 237 (454)
T ss_pred HHHhCCChhheEEeeCC---cHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcch
Confidence 4899999999999974 55789999999999999999999999999999997 699999999999999999999
Q ss_pred -CHHHHHHHHHHHHHHhcCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 289 -NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 289 -Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++ ++ +||++++.+.+++.+.+
T Consensus 238 ~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~d~f~~~l~~~~~~-~~-----------~g~~~~~~~~~~~~~~i 305 (454)
T cd07129 238 ERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALAEALAA-AP-----------AQTMLTPGIAEAYRQGV 305 (454)
T ss_pred HHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccHHHHHHHHHHHHhc-cC-----------CCCCcChHHHHHHHHHH
Confidence 89999999999999999999999999999999 999999999999998 54 35677777788888888
Q ss_pred HHHHHC-CCeEEeCCCccccCCCceeeceEeecCC---CCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 367 QDAISK-GAKVILGGGKVTKLGSKFFAPTILTNIT---PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 367 ~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
++++++ |+++++||.... +|+|++|||+...+ +++++++||+||||++|++|+|.||+|+++|+++|||++|||
T Consensus 306 ~~a~~~~ga~~l~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vf 383 (454)
T cd07129 306 EALAAAPGVRVLAGGAAAE--GGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIH 383 (454)
T ss_pred HHHHhcCCcEEEeCCCcCC--CCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEE
Confidence 999988 999999997542 58999999998665 689999999999999999999999999999999999999999
Q ss_pred cCC--HHHHHHHHhhc--ceeeEEEcCCCCCC---CCCcccC-CCCCCCCCC--chHHHHHhchhceEEEecc
Q psy3132 443 TND--ISQAWRVGKKL--QVGMVGINEGIISH---TEAAFGG-VKESGLGRE--GSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 443 t~d--~~~~~~~~~~l--~~G~v~iN~~~~~~---~~~pfGG-~~~SG~g~~--~g~~~l~~~t~~k~v~~~~ 505 (507)
|+| .+.+++++++| ++|+|+||+++... +.+|||| +|.||+|++ +|++++++||++ |+++|
T Consensus 384 t~d~~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~~~~~g~~~~~~~~~~--~~~~~ 454 (454)
T cd07129 384 GEEDDLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPRFTSVGTAAIERFLRP--VCYQN 454 (454)
T ss_pred ccCchHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCccccccHHHHHHhccc--cccCC
Confidence 999 89999999999 69999999875532 4799999 999999999 799999999995 56654
|
Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. |
| >cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-82 Score=665.19 Aligned_cols=430 Identities=45% Similarity=0.749 Sum_probs=406.1
Q ss_pred HHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcc
Q psy3132 68 QYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147 (507)
Q Consensus 68 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~ 147 (507)
++++++|++|++.|+.++.++|.++|+++++.|.+++++|+++++.|+||+..+++.|+..+++.+++++..++.+.+..
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~ei~~~i~~l~~~~~~~~~~~~~~ 80 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIEEALGEVARAADTFRYYAGLARRLHGEV 80 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 36889999999999999999999999999999999999999999999999999999999999999999998887765543
Q ss_pred ccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q psy3132 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVT 227 (507)
Q Consensus 148 ~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 227 (507)
......+...+.+++|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|++++++++
T Consensus 81 ~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~ 160 (432)
T cd07078 81 IPSPDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVT 160 (432)
T ss_pred ccccCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEe
Confidence 22223466788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCC
Q psy3132 228 SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQ 307 (507)
Q Consensus 228 g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ 307 (507)
++ +.+.+..|+.|++++.|.||||..+++.|.+.++++++|+++|+||+||+||++|+|++.|++.+++++|.++||
T Consensus 161 ~~---~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq 237 (432)
T cd07078 161 GD---GDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQ 237 (432)
T ss_pred cC---chHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCC
Confidence 74 455889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCC
Q psy3132 308 ACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387 (507)
Q Consensus 308 ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~ 387 (507)
.|+++++||||++++++|+++|++++.+ +++|+|.+++ +++||++++.+++++.+++++++++|+++++||..+....
T Consensus 238 ~C~a~~~i~v~~~~~~~~~~~L~~~l~~-~~~g~p~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~ 315 (432)
T cd07078 238 VCTAASRLLVHESIYDEFVERLVERVKA-LKVGNPLDPD-TDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGK 315 (432)
T ss_pred CccCCceEEEcHHHHHHHHHHHHHHHHc-cCcCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence 9999999999999999999999999999 9999999998 9999999999999999999999999999999997653214
Q ss_pred CceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCC
Q psy3132 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGI 467 (507)
Q Consensus 388 g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~ 467 (507)
|+|++|||+.+++++++++++|+||||++|++|++.||||+++|+.++||++||||+|.+.++++++++++|+|+||+..
T Consensus 316 g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~ 395 (432)
T cd07078 316 GYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYS 395 (432)
T ss_pred CcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 468 IS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 468 ~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
.. .+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 396 ~~~~~~~pfgG~~~sg~g~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 396 VGAEPSAPFGGVKQSGIGREGGPYGLEEYTEPKTVT 431 (432)
T ss_pred CCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 76 788999999999999999999999999999985
|
The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer |
| >TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=669.71 Aligned_cols=434 Identities=20% Similarity=0.262 Sum_probs=375.6
Q ss_pred cccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-
Q psy3132 46 PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG- 124 (507)
Q Consensus 46 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~- 124 (507)
.=+||+|++++++++.++. +.++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+|||..+++.
T Consensus 68 ~e~~P~t~~~~~~~~~~~~---~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~ 144 (551)
T TIGR02288 68 GERSPYGVELGVTYPQCDG---DALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQA 144 (551)
T ss_pred cccCCCCCCEEEEEcCCCH---HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhc
Confidence 3479999999999999985 899999999999999999999999999999999999999999999999999998863
Q ss_pred ----hHHHHHHHHHHHHHHHHHhcCccc---cCCCCC---ceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeE
Q psy3132 125 ----EVVYANSFVDWFSEEARRTYGELV---PSPVKS---KELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTC 194 (507)
Q Consensus 125 ----ev~~~~~~l~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~V 194 (507)
++...++.++|++....++.+... +..... ...+..++|+|||++|+|||||+++.++++++||++||+|
T Consensus 145 gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~V 224 (551)
T TIGR02288 145 GGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPV 224 (551)
T ss_pred cChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeE
Confidence 778889999999988777665432 211111 1223478999999999999999999999999999999999
Q ss_pred EeccCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccc
Q psy3132 195 VIKPAEDTPLTAL----ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK 270 (507)
Q Consensus 195 vlkps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~ 270 (507)
|+|||+.+|+++. ++.++|.++|+|+|+||+|+++ .+.++++.|+.||.|+.|.||||+.+|+.|++.++ .+
T Consensus 225 VlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~--~g~~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa--~~ 300 (551)
T TIGR02288 225 LVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFD--PGHEAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR--QA 300 (551)
T ss_pred EEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCC--CcHHHHHHHHhCCCccEEEEECCHHHHHHHHHhcc--cC
Confidence 9999999999765 5679999999999999999973 15678999999999999999999999999999876 47
Q ss_pred ccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh---------hHHHHHHHHHHHHHhccccCC
Q psy3132 271 RLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ---------VFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 271 ~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++++ + +|+
T Consensus 301 ~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~-l-vGd 378 (551)
T TIGR02288 301 QVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDEVAADLATAIDG-L-LGD 378 (551)
T ss_pred cEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHHHHHHHHHHHHHHH-h-cCC
Confidence 99999999999999999999999999999999999999999999999999 799999999999999 8 999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc--c-CCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT--K-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
|.++. +++|||+++.+++++ ++++++| ++++||.... . .+++|++|||+....++|++++||+||||++|+
T Consensus 379 p~~~~-~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~ 452 (551)
T TIGR02288 379 PARAT-AVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVV 452 (551)
T ss_pred ccccc-ccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEE
Confidence 99988 999999999999995 5566788 6666765431 1 123688999995444599999999999999999
Q ss_pred ecCCHHHHHHHHhcC--CCC-cEEEEecCCHHHHHHHHhhc----------ceeeEEEcCCCCCCCCCcccCCCCCCCCC
Q psy3132 419 KFKTEEESLCVANNS--NTG-LAGYFFTNDISQAWRVGKKL----------QVGMVGINEGIISHTEAAFGGVKESGLGR 485 (507)
Q Consensus 419 ~~~~~~eai~~~n~~--~~g-l~a~v~t~d~~~~~~~~~~l----------~~G~v~iN~~~~~~~~~pfGG~~~SG~g~ 485 (507)
+|+|.||||+++|++ +|| |++||||+|.+.++++.+++ ++|.|+||. ..||++.+.||...
T Consensus 453 ~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~------~~~~~~~~~sg~n~ 526 (551)
T TIGR02288 453 AVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQ------SAAFSDFHGTGGNP 526 (551)
T ss_pred EECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEcc------CCCCCCCCCCCCCC
Confidence 999999999999998 566 99999999999999999999 677777775 35777777777664
Q ss_pred C-chHHHHHhchhceE
Q psy3132 486 E-GSRHGMEEFTQIKY 500 (507)
Q Consensus 486 ~-~g~~~l~~~t~~k~ 500 (507)
. +..+.--.|...|-
T Consensus 527 ~a~~~~~~~~~~~~r~ 542 (551)
T TIGR02288 527 AANASLSDGAFVANRF 542 (551)
T ss_pred ccCCcccchhhhhcce
Confidence 3 44444455554443
|
This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. |
| >KOG2456|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-84 Score=619.09 Aligned_cols=423 Identities=27% Similarity=0.439 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcC
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYG 145 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 145 (507)
++..++.+|.+|.+.++.+.+.|.+.|+++..+++++.+++.+++..|.+|+..++. .|+...++.++++....+.+..
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~ 83 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVK 83 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhcc
Confidence 455689999999999999999999999999999999999999999999999999885 7888888888887766554432
Q ss_pred c-ccc--CCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCc
Q psy3132 146 E-LVP--SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGV 222 (507)
Q Consensus 146 ~-~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gv 222 (507)
. ... ......+.+++.+|+|||++|+|||||+.+.+.++++||||||+||+|||+.+|.++.+|++++-+. |+++.
T Consensus 84 ~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~ 162 (477)
T KOG2456|consen 84 PEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDL 162 (477)
T ss_pred ccccCcccccccCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcce
Confidence 2 111 1122457889999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred EEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHH
Q psy3132 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF 302 (507)
Q Consensus 223 v~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~ 302 (507)
+.+|.| |.+....|++| ++|.|+||||+.+|+.|+.+++++++|++||||||+|++|++|+|++-++++|+|+++
T Consensus 163 ~~VV~G----gv~ETt~LL~~-rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~ 237 (477)
T KOG2456|consen 163 IRVVNG----GVPETTELLKQ-RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKW 237 (477)
T ss_pred EEEecC----CCchHHHHHHh-hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhh
Confidence 999997 55555667776 8999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCc
Q psy3132 303 RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382 (507)
Q Consensus 303 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 382 (507)
+|+||.|.||++|+++++++.+|+++++..+++ + +|+...++ .+++.+||..|++|+..+++.- .+++.||..
T Consensus 238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~e-F-YG~n~~eS-~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~ 310 (477)
T KOG2456|consen 238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKE-F-YGENPKES-KDLSRIINQRHFQRLSALLDET----GKVAIGGES 310 (477)
T ss_pred ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHH-H-hCCCcccc-ccHHHHhhHHHHHHHHHHhcCC----CceecCCcc
Confidence 999999999999999999999999999999998 4 66666666 8999999999999999998742 689999997
Q ss_pred cccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEE
Q psy3132 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462 (507)
Q Consensus 383 ~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~ 462 (507)
+. ...|++|||+.+++++.++|+||+|||||+|+.+++.+|+|+.+|..+-.|++|+||+|.....++.+++.+|.|.
T Consensus 311 d~--~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt 388 (477)
T KOG2456|consen 311 DE--SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVT 388 (477)
T ss_pred ch--hhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCee
Confidence 75 3679999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 463 INEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 463 iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+|+... .-..+||||+|.||+|++||+++++.|++.|+|..+
T Consensus 389 ~ND~i~H~~~~~lPFGGVG~SGmG~YhGK~sFdTFSH~k~~l~r 432 (477)
T KOG2456|consen 389 VNDVIMHVTLDSLPFGGVGESGMGRYHGKFSFDTFSHEKSCLLR 432 (477)
T ss_pred ecceEEEEEeeccCcCCcCccccccccccccccccccchhhhhc
Confidence 999765 346799999999999999999999999999998654
|
|
| >cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-82 Score=662.46 Aligned_cols=416 Identities=19% Similarity=0.197 Sum_probs=374.7
Q ss_pred HHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhc--C
Q psy3132 68 QYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY--G 145 (507)
Q Consensus 68 ~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~--~ 145 (507)
+.|+++|++|++.|+++++++|+++|+++++.|++++++|++++++|+|||. ++..|+..+++.+++++..+.... +
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~ev~~~i~~~~~~~~~~~~~~~~~ 80 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAENICGDQVQLRARAFVIYSYRIPH 80 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhhhhcchHHHHHHHHHHHHhccccc
Confidence 6799999999999999999999999999999999999999999999999999 777899999999999998876532 1
Q ss_pred ccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCC-CCCc
Q psy3132 146 ELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI-PKGV 222 (507)
Q Consensus 146 ~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGl-P~gv 222 (507)
..... .......+.+++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++..+.+++.++|+ |+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~ 160 (442)
T cd07084 81 EPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPED 160 (442)
T ss_pred cccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccc
Confidence 11111 11134568899999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred EEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCC-CHHHHHHHHHHHH
Q psy3132 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNA-NLQKAVSGAMAAK 301 (507)
Q Consensus 223 v~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da-Dl~~aa~~i~~~~ 301 (507)
+|+++++ +. .+..|+.||+++.|+||||+.+|+.|++.++. +|+++|+|||||+||++|| |++.+++.+++++
T Consensus 161 ~~~v~g~---~~-~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~--~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~ 234 (442)
T cd07084 161 VTLINGD---GK-TMQALLLHPNPKMVLFTGSSRVAEKLALDAKQ--ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDM 234 (442)
T ss_pred eEEeeCC---cH-HHHHHHcCCCCCEEEEECCHHHHHHHHHhccC--CcEEEeccCcCcEEECCChhhHHHHHHHHHHHH
Confidence 9999984 44 88999999999999999999999999998875 8999999999999999999 6999999999999
Q ss_pred HHhcCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCeEEeC
Q psy3132 302 FRNCGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK-GAKVILG 379 (507)
Q Consensus 302 ~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~g 379 (507)
|.|+||.|++++|||||++ ++++|+++|++++++ +++| + +++||++++ ++.+++++++++ |+++++|
T Consensus 235 ~~~~GQ~C~a~~rl~V~~~~i~~~f~~~l~~~~~~-~~~g-----~-~~~gpl~~~----~~~~~i~~a~~~gga~~~~g 303 (442)
T cd07084 235 TACSGQKCTAQSMLFVPENWSKTPLVEKLKALLAR-RKLE-----D-LLLGPVQTF----TTLAMIAHMENLLGSVLLFS 303 (442)
T ss_pred hcccCCeecCCcEEEEeCCccHHHHHHHHHHHHHh-cccC-----c-cccChhhhH----HHHHHHHHHHhcCCcEEEeC
Confidence 9999999999999999999 999999999999999 9998 4 899999775 455566677777 5999999
Q ss_pred CCccc-----cCCCceeeceEeecCCCCC---CCcccceeeccEEeEecCC--HHHHHHHHhcCCCCcEEEEecCCHHHH
Q psy3132 380 GGKVT-----KLGSKFFAPTILTNITPDM---LCYTEEVFGPVAVCIKFKT--EEESLCVANNSNTGLAGYFFTNDISQA 449 (507)
Q Consensus 380 g~~~~-----~~~g~~~~Ptvl~~~~~~~---~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~ 449 (507)
|.... ...|+|++|||+.+++++| ++++||+||||++|++|+| .+|+|+++|+++|||++||||+|.+.+
T Consensus 304 g~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~ 383 (442)
T cd07084 304 GKELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFL 383 (442)
T ss_pred CcccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHH
Confidence 97532 1148999999999999997 9999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhc-ceeeEEEcCC-CC-CCCCCcccC-CCCCCCCCCc-hHHHHHhchhceEE
Q psy3132 450 WRVGKKL-QVGMVGINEG-II-SHTEAAFGG-VKESGLGREG-SRHGMEEFTQIKYM 501 (507)
Q Consensus 450 ~~~~~~l-~~G~v~iN~~-~~-~~~~~pfGG-~~~SG~g~~~-g~~~l~~~t~~k~v 501 (507)
+++++++ ++|+||||+. +. ..+..|||| .|.||+|++. |.+++++||+.+.+
T Consensus 384 ~~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 384 QELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAGIGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCccccchHHhhheeeeeee
Confidence 9999999 9999999976 33 345677776 8899999995 99999999997653
|
ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. |
| >KOG2454|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-82 Score=601.80 Aligned_cols=454 Identities=28% Similarity=0.498 Sum_probs=421.3
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh-h
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-L 123 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a-~ 123 (507)
++.+.|+||+.++.++.-++.|+++-+..|++|+++|.+.+...|.+.|+.+.+.+-++.|.+++..++|+||+..+| .
T Consensus 66 vqCycPatg~yLG~fp~~~~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKTmvDAs~ 145 (583)
T KOG2454|consen 66 VQCYCPATGKYLGYFPALSPTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKTMVDASL 145 (583)
T ss_pred eEEecCCCcceeeecccCChhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCchhhhhhH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999998877 4
Q ss_pred HhHHHHHHHHHHHHHHHHHhcCc-cccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 124 GEVVYANSFVDWFSEEARRTYGE-LVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
+|+-.+.+.+.|.....++.... ..+.. ..-...++.++|+||+..|.|||||+...+.+++.||.+||.+|+|-|+
T Consensus 146 GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE 225 (583)
T KOG2454|consen 146 GEILVTLEKITWTLSEGERWLKPESRPNGRAMLYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSE 225 (583)
T ss_pred hHHHHHHHHhhhhhhcchhhcCCcCCCchhheeeccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeec
Confidence 89999999999887766554332 22211 1123467899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHH----HHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccccccccc
Q psy3132 201 DTPLTALALAA----LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL 276 (507)
Q Consensus 201 ~~~~~~~~l~~----~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel 276 (507)
.+..+.....+ +|...|-|++++|++++ -++.+++|.+|+.++.+.|.||..+++.|++.+++.++|+.+||
T Consensus 226 ~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itc----lpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~LTPv~lEL 301 (583)
T KOG2454|consen 226 HASWSGCFYFEIIRAALAAVGAPPNLVQVITC----LPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTLTPVTLEL 301 (583)
T ss_pred ceeeehhhHHHHHHHHHHHcCCCcchhheeec----CcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhcCcEEEee
Confidence 99988776655 45566999999999997 46899999999999999999999999999999999999999999
Q ss_pred CCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCH
Q psy3132 277 GGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINL 356 (507)
Q Consensus 277 gG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~ 356 (507)
|||+++||++|+|++..+.-++++.|..+||.|...+|++||+++||.|+..|-.+++. ++.|.|...+ .|||.|++.
T Consensus 302 GGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s-~r~G~~~~~~-vDMGAm~s~ 379 (583)
T KOG2454|consen 302 GGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIYDAFIGQLTKRVKS-VRAGPPLTGR-VDMGAMCSQ 379 (583)
T ss_pred cCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchHHHHHHHHHHHHHH-HHcCCCccCc-cchhhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999 9999999988 999999999
Q ss_pred HHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcC
Q psy3132 357 AQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS 433 (507)
Q Consensus 357 ~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~ 433 (507)
.+++.++.++++|+++||+++.||.+-.. ..|.|++||++.+++++|.|++||.||||++++++++.|++|+++|++
T Consensus 380 nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s 459 (583)
T KOG2454|consen 380 NRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDS 459 (583)
T ss_pred cchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCC
Confidence 99999999999999999999999985432 358999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 434 NTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 434 ~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+|||.++||+.|..+++++++++++|.|-||+... ....+||||+|.||+||..|.+||+-.++.|+|.+.
T Consensus 460 ~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGrFaG~EGLrg~Cn~Ksv~yd 531 (583)
T KOG2454|consen 460 RFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGRFAGIEGLRGCCNVKSVAYD 531 (583)
T ss_pred cccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccccccHHHHHHHhcccceecc
Confidence 99999999999999999999999999999999765 457799999999999999999999999999999765
|
|
| >cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-80 Score=653.98 Aligned_cols=444 Identities=19% Similarity=0.242 Sum_probs=387.5
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
.+++||+|++.+++++.+ |++.++++|++|++.|+++++++|.++|++++++|++++++|++++++|+||++.++..
T Consensus 67 ~~~~~P~~~~l~~~~~~a---dv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~a~q 143 (549)
T cd07127 67 GGEVSPYGVELGVTYPQC---DPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMMAFQ 143 (549)
T ss_pred eeeECCCCCcEEEEEchH---HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHHHHh
Confidence 889999999999999987 89999999999999999999999999999999999999999999999999999988862
Q ss_pred -----hHHHHHHHHHHHHHHHHHhcCccccCCCCC------ceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCe
Q psy3132 125 -----EVVYANSFVDWFSEEARRTYGELVPSPVKS------KELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCT 193 (507)
Q Consensus 125 -----ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~ 193 (507)
|++.+++.++|+++...++.+........+ ......++|+||+++|+|||||+++.+.++++||++||+
T Consensus 144 a~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~ 223 (549)
T cd07127 144 AGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNP 223 (549)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCe
Confidence 899999999999988877654322110011 112347899999999999999999999999999999999
Q ss_pred EEeccCCCChHHHH----HHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 194 CVIKPAEDTPLTAL----ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 194 Vvlkps~~~~~~~~----~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
||+|||+.+|+++. ++.++|.++|+|+|+||+|+++ .+.++++.|+.||.++.|.||||+.+|+.|++.++ .
T Consensus 224 VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~v~g~--~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~--~ 299 (549)
T cd07127 224 VIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTLAADT--PEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR--Q 299 (549)
T ss_pred EEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEEEeCC--CcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc--c
Confidence 99999999998864 4668999999999999999974 14678999999999999999999999999999987 4
Q ss_pred cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh---------hHHHHHHHHHHHHHhccccC
Q psy3132 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ---------VFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 270 ~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~---------i~~~f~~~l~~~~~~~~~~g 340 (507)
+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|+|||++ +||+|+++|++++++ + +|
T Consensus 300 ~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~-l-~G 377 (549)
T cd07127 300 AQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDG-L-LA 377 (549)
T ss_pred CcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHH-h-cC
Confidence 799999999999999999999999999999999999999999999999999 899999999999999 8 99
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCC-ceeeceEeecCCCCCCCcccceeeccEEe
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGS-KFFAPTILTNITPDMLCYTEEVFGPVAVC 417 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g-~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 417 (507)
+|.+.. +++|||+++.+++++.+ +++.|+ +++||..+.. ..| +|++|||+...+++|++++||+||||++|
T Consensus 378 dp~~~~-~~~Gpli~~~~~~ri~~----a~~~g~-vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V 451 (549)
T cd07127 378 DPARAA-ALLGAIQSPDTLARIAE----ARQLGE-VLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFV 451 (549)
T ss_pred Cccccc-cccCCcCCHHHHHHHHH----HHhCCC-EEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEE
Confidence 999888 99999999999999865 455665 7788865421 124 56699999988899999999999999999
Q ss_pred EecCCHHHHHHHHhcCC--C-CcEEEEecCCHHHHHHHHhhc-cee-eEEEcCCCC--CCCCCcccCCCCCCCCCC-chH
Q psy3132 418 IKFKTEEESLCVANNSN--T-GLAGYFFTNDISQAWRVGKKL-QVG-MVGINEGII--SHTEAAFGGVKESGLGRE-GSR 489 (507)
Q Consensus 418 ~~~~~~~eai~~~n~~~--~-gl~a~v~t~d~~~~~~~~~~l-~~G-~v~iN~~~~--~~~~~pfGG~~~SG~g~~-~g~ 489 (507)
++|+|.||+|+++|++. + ||++||||+|.+.++++.+++ ++| +++||.... .+..+||||.+.||.... +..
T Consensus 452 ~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~~a~~~ 531 (549)
T cd07127 452 VATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANPAANAA 531 (549)
T ss_pred EEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCcccccc
Confidence 99999999999999984 4 699999999999999999995 455 999994332 234467999999998754 666
Q ss_pred HHHHhchhceEEEe
Q psy3132 490 HGMEEFTQIKYMCF 503 (507)
Q Consensus 490 ~~l~~~t~~k~v~~ 503 (507)
+..-.|...|--.+
T Consensus 532 ~~~~~fv~~r~~~~ 545 (549)
T cd07127 532 LTDGAFVANRFRVV 545 (549)
T ss_pred cchhhhhhcceEEE
Confidence 66667776664433
|
Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. |
| >cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-81 Score=649.00 Aligned_cols=405 Identities=20% Similarity=0.231 Sum_probs=350.2
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHh
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRT 143 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~ 143 (507)
-+|++.|+++|++||+.|++++.++|.++|+++++.|+++.++|++++++|+|||..++. ++.++++++.....
T Consensus 3 ~~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~------~~~~~~~~~~~~~~ 76 (429)
T cd07121 3 FATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDK------IAKNHLAAEKTPGT 76 (429)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH------HHHHHHHHHhcCcc
Confidence 378999999999999999999999999999999999999999999999999999987764 34455554422111
Q ss_pred cCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHH----HHcC
Q psy3132 144 YGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALA----HEAQ 217 (507)
Q Consensus 144 ~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l----~~aG 217 (507)
. ...+. ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+.+++ .++|
T Consensus 77 ~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aG 155 (429)
T cd07121 77 E-DLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAG 155 (429)
T ss_pred c-ccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcC
Confidence 0 00010 112234578899999999999999999999999999999999999999999999999999877 4789
Q ss_pred CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHH
Q psy3132 218 IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGA 297 (507)
Q Consensus 218 lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i 297 (507)
+|+|++|+|+++ +.+.++.|++||+||.|+||||+.+|+.|++. .||+++|+|||||+||++|||++.|++.+
T Consensus 156 lP~gvv~~v~g~---~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~----~k~~~lelGGk~p~iV~~dADld~Aa~~i 228 (429)
T cd07121 156 GPDNLVVTVEEP---TIETTNELMAHPDINLLVVTGGPAVVKAALSS----GKKAIGAGAGNPPVVVDETADIEKAARDI 228 (429)
T ss_pred CCcceEEEecCC---ChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC----CCceEeecCCCceEEEecCCCHHHHHHHH
Confidence 999999999974 56788999999999999999999999999875 49999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC--CCe
Q psy3132 298 MAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK--GAK 375 (507)
Q Consensus 298 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~ 375 (507)
++++|.|+||.|++++|||||+++||+|+++|+++ .. +++++++++++.++++++++. |++
T Consensus 229 ~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~~-~~----------------~~i~~~~~~~v~~~i~~a~~~~~ga~ 291 (429)
T cd07121 229 VQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQRN-GA----------------YVLNDEQAEQLLEVVLLTNKGATPNK 291 (429)
T ss_pred HhcccccCCCCCCccceEEEeHHHHHHHHHHHHHC-CC----------------EEcCHHHHHHHHHhhcccCCCccccc
Confidence 99999999999999999999999999999998865 21 478999999999999999864 689
Q ss_pred EEeCCCccc--cCCCceee---ceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCc--EEEEecCCHHH
Q psy3132 376 VILGGGKVT--KLGSKFFA---PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL--AGYFFTNDISQ 448 (507)
Q Consensus 376 v~~gg~~~~--~~~g~~~~---Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~~~ 448 (507)
++.||.... ...|.|+. |||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+.
T Consensus 292 ~~~gg~~~~~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~ 371 (429)
T cd07121 292 KWVGKDASKILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVEN 371 (429)
T ss_pred cccCcCHHHHHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHH
Confidence 999986410 11377777 599999999999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCC--CCCch--HHHHHhchhceEE
Q psy3132 449 AWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGL--GREGS--RHGMEEFTQIKYM 501 (507)
Q Consensus 449 ~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~--g~~~g--~~~l~~~t~~k~v 501 (507)
+++|++++++|+||||++.. +.+||||+|.|++ |..-| .-+-+.||+.|.+
T Consensus 372 a~~~a~~l~aG~v~iN~~~~--~~~p~gG~k~s~~~~~~~~~~~~~~~~~~~~~~~~ 426 (429)
T cd07121 372 LTKMARAMQTTIFVKNGPSY--AGLGVGGEGYTTFTIAGPTGEGLTSARTFTRRRRC 426 (429)
T ss_pred HHHHHhhCCceEEEEcCCCc--CccccCCCccceEEecCCcCcCccChhhhheeeee
Confidence 99999999999999997754 6789999999998 65433 3334455555443
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. |
| >cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-80 Score=636.65 Aligned_cols=409 Identities=15% Similarity=0.213 Sum_probs=348.7
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHH--HHHHHHHHHHHhc
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANS--FVDWFSEEARRTY 144 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~--~l~~~~~~~~~~~ 144 (507)
+++|+++|++||+.|+.+|+++|.++|+++++.|++++++|++++++|+|||+.+++.++..++. ..++++. ...
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~~~~~~~~~~~~~~~~~---~~~ 77 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKVIKNHFAAEYIYNVYKD---EKT 77 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhc---ccc
Confidence 47899999999999999999999999999999999999999999999999999999876655443 2233322 112
Q ss_pred CccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH----HcCCCC
Q psy3132 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH----EAQIPK 220 (507)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----~aGlP~ 220 (507)
+...+. ..+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++. ++|+|+
T Consensus 78 ~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~ 156 (439)
T cd07081 78 CGVLTG-DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPE 156 (439)
T ss_pred CceecC-CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCCh
Confidence 222221 123456899999999999999999999999999999999999999999999999988888775 779999
Q ss_pred CcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHH
Q psy3132 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAA 300 (507)
Q Consensus 221 gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~ 300 (507)
|++|+|+++ +.+.++.|+.||+|++|.||||+. +++.+++++||+++|+|||||+||++|||++.|++.++++
T Consensus 157 gvv~~v~g~---~~~~g~~L~~~~~V~~V~FTGs~~----v~~~aa~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~ 229 (439)
T cd07081 157 NLIGWIDNP---SIELAQRLMKFPGIGLLLATGGPA----VVKAAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKS 229 (439)
T ss_pred hhEEEEcCC---CHHHHHHHHcCCCCCEEEEECCHH----HHHHHHhcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999974 567899999999999999999998 4666777899999999999999999999999999999999
Q ss_pred HHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCC
Q psy3132 301 KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380 (507)
Q Consensus 301 ~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg 380 (507)
+|.|+||.|++.+|+|||+++||+|+++|+++ +||+++..+++++.++|+++.++|++++.|+
T Consensus 230 ~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~-----------------~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~ 292 (439)
T cd07081 230 KTFDNGVICASEQSVIVVDSVYDEVMRLFEGQ-----------------GAYKLTAEELQQVQPVILKNGDVNRDIVGQD 292 (439)
T ss_pred HhcCCCCCCCCCCEEEEcHHHHHHHHHHHHHc-----------------CCccCCHHHHHHHHHHHHhcCCcCCcccCCC
Confidence 99999999999999999999999999999753 3789999999999999999999999875443
Q ss_pred C-ccccCCCceeece---EeecCC--CCCCCcccceeeccEEeEecCCHHHHHHHHhcC----CCCcEEEEecCC---HH
Q psy3132 381 G-KVTKLGSKFFAPT---ILTNIT--PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS----NTGLAGYFFTND---IS 447 (507)
Q Consensus 381 ~-~~~~~~g~~~~Pt---vl~~~~--~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d---~~ 447 (507)
. ......|+|+.|| ++.+++ ++|++++||+||||++|++|+|+||||+++|++ +|||+++|||+| .+
T Consensus 293 ~~~~~~~~G~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~ 372 (439)
T cd07081 293 AYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIE 372 (439)
T ss_pred HHHHHHHcCCccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHH
Confidence 2 1111248899998 999888 999999999999999999999999999999965 799999999999 99
Q ss_pred HHHHHHhhcceeeEEEcCCC-CCC--CCCcccCCCCC--CCCCCchHH-----HHHhchhceEEEe
Q psy3132 448 QAWRVGKKLQVGMVGINEGI-ISH--TEAAFGGVKES--GLGREGSRH-----GMEEFTQIKYMCF 503 (507)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~-~~~--~~~pfGG~~~S--G~g~~~g~~-----~l~~~t~~k~v~~ 503 (507)
.++++++++++|+|+||.+. ... ..--|||++.+ |.|..+|.. +..+|++.|.|.+
T Consensus 373 ~a~~~a~~l~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 373 NMNQFANAMKTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred HHHHHHhhCCceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999999999999765 322 23457676655 333332222 4778888888765
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. |
| >PRK15398 aldehyde dehydrogenase EutE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-79 Score=638.09 Aligned_cols=406 Identities=19% Similarity=0.232 Sum_probs=348.6
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA 140 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~ 140 (507)
....+|++.++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++. ..++++++..
T Consensus 32 ~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~------~~~~~~~~~~ 105 (465)
T PRK15398 32 MGVFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI------AKNVAAAEKT 105 (465)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH------HHHHHHHHHh
Confidence 3478899999999999999999999999999999999999999999999999999999988753 2344444432
Q ss_pred HH---hcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH---
Q psy3132 141 RR---TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH--- 214 (507)
Q Consensus 141 ~~---~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~--- 214 (507)
.. ...... ...+...+++++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 106 ~~~~~~~~~~~--~~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l 183 (465)
T PRK15398 106 PGVEDLTTEAL--TGDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAI 183 (465)
T ss_pred ccccccccCcc--cCCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHH
Confidence 11 111111 1123456788899999999999999999999999999999999999999999999999998876
Q ss_pred -HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHH
Q psy3132 215 -EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKA 293 (507)
Q Consensus 215 -~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~a 293 (507)
++|+|+|++|+++++ +.+.++.|++||+||.|+||||+.+|+.|++ ..||+++|+|||||+||++|||++.|
T Consensus 184 ~eaGlP~gvv~vv~g~---~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~----~~k~~~~elGGk~p~IV~~dADld~A 256 (465)
T PRK15398 184 VAAGGPENLVVTVAEP---TIETAQRLMKHPGIALLVVTGGPAVVKAAMK----SGKKAIGAGAGNPPVVVDETADIEKA 256 (465)
T ss_pred HHcCCCCCeEEEecCC---CHHHHHHHHcCCCccEEEeeCCHHHHHHHHH----cCCceeeecCCCceEEEecCCCHHHH
Confidence 689999999999974 5678899999999999999999999999998 35999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCC
Q psy3132 294 VSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG 373 (507)
Q Consensus 294 a~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G 373 (507)
++.+++++|.|+||.|++++|||||+++||+|+++|+++ . +|++++.+++++.++++++..++
T Consensus 257 a~~i~~g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~~--~---------------~~li~~~~~~~v~~~l~~~~~~~ 319 (465)
T PRK15398 257 ARDIVKGASFDNNLPCIAEKEVIVVDSVADELMRLMEKN--G---------------AVLLTAEQAEKLQKVVLKNGGTV 319 (465)
T ss_pred HHHHHHhcccCCCCcCCCCceEEEeHHHHHHHHHHHHHc--C---------------CccCCHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999864 1 26899999999999998654446
Q ss_pred CeEEeCCCcc--ccCCCcee---eceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCc--EEEEecCCH
Q psy3132 374 AKVILGGGKV--TKLGSKFF---APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL--AGYFFTNDI 446 (507)
Q Consensus 374 a~v~~gg~~~--~~~~g~~~---~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl--~a~v~t~d~ 446 (507)
++++.||... ....|+|+ +|||+.+++++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.
T Consensus 320 ~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~ 399 (465)
T PRK15398 320 NKKWVGKDAAKILEAAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNV 399 (465)
T ss_pred chhhhCCCHHHHHHhCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCH
Confidence 6777776431 01135555 4799999999999999999999999999999999999999999998 999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+.++++++++++|+|+||.+.. +.+||||+|.|.+-- +|+.| ...|..|+++
T Consensus 400 ~~a~~~a~~l~~G~V~iN~~~~--~~~p~gg~~~s~~~~-~~~~g-~~~~~~~~~~ 451 (465)
T PRK15398 400 DNLNKMARAIQTSIFVKNGPSY--AGLGLGGEGFTTFTI-ATPTG-EGVTSARTFT 451 (465)
T ss_pred HHHHHHHHhCCceEEEECCCCc--cccCcCCCCCceeee-cccCC-CCccchhhhh
Confidence 9999999999999999997753 678999999998521 35555 5555555543
|
|
| >PRK00197 proA gamma-glutamyl phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-78 Score=626.01 Aligned_cols=388 Identities=19% Similarity=0.242 Sum_probs=341.3
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh--------HhHHHHHH
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL--------GEVVYANS 131 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 131 (507)
.+|++.++++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 3 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~ 82 (417)
T PRK00197 3 MEYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAE 82 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHH
Confidence 36899999999999999999999999999999999999999999999998887774 3443 68899999
Q ss_pred HHHHHHHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH
Q psy3132 132 FVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209 (507)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l 209 (507)
.+++++.+++.. +...+.. ..+...+++++|+|||++|+||| | .++++++++||++||+||+|||+.+|.++.++
T Consensus 83 ~~~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l 159 (417)
T PRK00197 83 GLRQVAALPDPV-GEVLDGWTLPNGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRAL 159 (417)
T ss_pred HHHHHhhcCCCc-cccccceecCCCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHH
Confidence 999998776543 3322211 12346789999999999999986 4 77889999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 210 AALA----HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 210 ~~~l----~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
++++ .++|+|+|++|+|+++ ++..+++.|..||++|.|+||||+.+|+.|++.+ +||+++|||||||+||+
T Consensus 160 ~~l~~~~l~~aGlP~gv~~~v~g~--~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a---~~~~~lELGGk~p~IV~ 234 (417)
T PRK00197 160 VAVIQEALEEAGLPADAVQLVETT--DRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA---TVPVIEHGDGICHIYVD 234 (417)
T ss_pred HHHHHHHHHHcCcChhhEEEecCC--ChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc---CCCEEeecCCcceEEEe
Confidence 8875 6899999999999963 1345788899999999999999999999999875 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+| .|++++|+|||+++||+|+++|++++++ ++++
T Consensus 235 ~dAdl~~Aa~~iv~~~~~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~~------------------------- 287 (417)
T PRK00197 235 ESADLDKALKIVLNAKTQRPS-VCNALETLLVHEAIAEEFLPKLAEALAE-AGVE------------------------- 287 (417)
T ss_pred CCCCHHHHHHHHHHhccCCCc-ccccceEEEEEHHHhHHHHHHHHHHHHH-CCCe-------------------------
Confidence 999999999999999999999 9999999999999999999999999988 5431
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
++ ||... .+ |+ |||+ +++|++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 288 ----------~~-~~~~~---~~-~~-PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d 348 (417)
T PRK00197 288 ----------LR-GDEAA---LA-LL-PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTED 348 (417)
T ss_pred ----------Ee-cCHHH---HH-hh-cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCC
Confidence 11 11110 12 33 9998 4689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEecc
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~ 505 (507)
.+.++++++++++|+|+||++....+..||||.|.||+| |++|++++++||+.|++.+++
T Consensus 349 ~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~~~~k~v~~~~ 412 (417)
T PRK00197 349 YAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVLGD 412 (417)
T ss_pred HHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhhcEEEEEEECC
Confidence 999999999999999999988766667899999999999 999999999999999998753
|
|
| >cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-78 Score=624.84 Aligned_cols=383 Identities=18% Similarity=0.235 Sum_probs=337.0
Q ss_pred HHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChh----hh--------hHhHHHHHHHHHHH
Q psy3132 69 YAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPT----ES--------LGEVVYANSFVDWF 136 (507)
Q Consensus 69 ~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a--------~~ev~~~~~~l~~~ 136 (507)
..+++|++||+.|+++|.++|.++|+++++.|++++++|++++++|+||+.. ++ ..|+..+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999999999999777666643 33 25899999999999
Q ss_pred HHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH
Q psy3132 137 SEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH 214 (507)
Q Consensus 137 ~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~ 214 (507)
+...+. .+...+.. ..+...+++++|+|||++|+|| +| .+.++++++||++||+||+|||+.+|.++..+.+++.
T Consensus 82 a~~~~~-~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~ 158 (406)
T cd07079 82 AALPDP-VGEVLRGWTLPNGLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQ 158 (406)
T ss_pred HhcCCC-CcccccceeccCccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHH
Confidence 876542 23222211 1234568899999999999996 56 7788999999999999999999999999999999886
Q ss_pred ----HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCH
Q psy3132 215 ----EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANL 290 (507)
Q Consensus 215 ----~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl 290 (507)
++|+|+|++|+|+++ +.+..++.|..||++|.|+||||+.+|+.|++.+ ++|+++|||||||+||++|||+
T Consensus 159 ~~l~~aG~P~gvv~~v~g~--~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a---~~pv~lELGGk~p~IV~~dADl 233 (406)
T cd07079 159 EALEEAGLPEDAVQLIPDT--DREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA---TIPVIKHGDGNCHVYVDESADL 233 (406)
T ss_pred HHHHHcCCCcccEEEecCC--ChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc---CCCEEeecCCcceEEEeCCCCH
Confidence 899999999999974 1236788899999999999999999999999877 6999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHH
Q psy3132 291 QKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAI 370 (507)
Q Consensus 291 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~ 370 (507)
+.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++
T Consensus 234 ~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~si~d~f~~~l~~~~~~----------------------------------- 277 (406)
T cd07079 234 EMAVRIVVNAKTQRPS-VCNALETLLVHRDIAEEFLPKLAEALRE----------------------------------- 277 (406)
T ss_pred HHHHHHHHHcccCCCc-ccccceeEEEeHHHHHHHHHHHHHHHHH-----------------------------------
Confidence 9999999999999999 9999999999999999999999988765
Q ss_pred HCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHH
Q psy3132 371 SKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAW 450 (507)
Q Consensus 371 ~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~ 450 (507)
.|++++ +|... ..|++|| ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++
T Consensus 278 -~ga~~~-~g~~~----~~~~~pt----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~ 347 (406)
T cd07079 278 -AGVELR-GDEET----LAILPGA----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAE 347 (406)
T ss_pred -CCCEEe-cCHHH----HHhcccc----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHH
Confidence 245644 33221 2377888 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcceeeEEEcCCCCCCCCCcccCCCCCCC----CCCchHHHHHhchhceEEEecc
Q psy3132 451 RVGKKLQVGMVGINEGIISHTEAAFGGVKESGL----GREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 451 ~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~----g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
++++++++|+|+||++....+..||||.|.||+ |+++|++++++||+.|+|+++|
T Consensus 348 ~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k~i~~~~ 406 (406)
T cd07079 348 RFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYKYIVRGD 406 (406)
T ss_pred HHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEEEEEeCC
Confidence 999999999999998776566789999999998 9999999999999999998765
|
Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1). |
| >COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-77 Score=593.33 Aligned_cols=477 Identities=30% Similarity=0.460 Sum_probs=431.9
Q ss_pred ccCcccchHHhhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
..|+|++.+.....+.+++.... .....++|+.+..+...+++||++ .++++.|..++.+|+++|++.|..|+..
T Consensus 86 SaG~Dlsne~~la~L~~al~~~a~~~w~A~p~~~~~~~~~g~~~pV~nPad~~dvVG~V~ea~~~~v~~A~~~A~~a~p~ 165 (769)
T COG4230 86 SAGLDLSNEHRLASLSSALLASAGQKWQAAPIVNGAPVAGGEPRPVINPADPDDIVGTVTEATEADVEQALEAAVAAAPI 165 (769)
T ss_pred ccccCcchHHHHHHHHHHHHhhhhhhhccccccCCCcCCCCCcccccCCCCHhHCeeeeeecCHHHHHHHHHHHHhhCcc
Confidence 47999999999999888887732 334578888887666699999998 6689999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (507)
|..+++.+|+.+|++++++++.+..+|..++++|.||+...+..||..++++||||+..++...+. ..
T Consensus 166 W~atp~~eRAaiL~raAdlme~~m~~L~~L~~REAGKtl~naIAEVREAVDFlrYYA~~ar~~~g~------------~~ 233 (769)
T COG4230 166 WSATPPAERAAILERAADLMEAQMPQLMGLLVREAGKTLSNAIAEVREAVDFLRYYAGQARDTFGN------------LT 233 (769)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHhcccCc------------cc
Confidence 999999999999999999999999999999999999999999999999999999999988763321 33
Q ss_pred eecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhh
Q psy3132 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL 240 (507)
Q Consensus 161 ~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L 240 (507)
.+|+|+|++|+|||||+.++..+++.||++||+|+-||.+++|+.+..-+++++|+|+|++++|+++|+ |+.++..|
T Consensus 234 ~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~---G~tvGa~L 310 (769)
T COG4230 234 HRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGR---GETVGAAL 310 (769)
T ss_pred cCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCC---Ccccchhh
Confidence 679999999999999999999999999999999999999999999999999999999999999999996 78899999
Q ss_pred hcCCCccEEEEeCCHHHHHHHHHhhcc---cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceec
Q psy3132 241 CTSPHVAGISFTGSTQVGKILYSHCSQ---GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI 317 (507)
Q Consensus 241 ~~~~~v~~v~ftGs~~~g~~i~~~~~~---~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V 317 (507)
+.++++++|+||||+++++.|.++.++ ...|++.|.||-|.+||+.+|--+.++..++.|+|..+||+|++.+.+++
T Consensus 311 ~~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLcl 390 (769)
T COG4230 311 TADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCL 390 (769)
T ss_pred hcCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhh
Confidence 999999999999999999999988876 34789999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEee
Q psy3132 318 QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILT 397 (507)
Q Consensus 318 ~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~ 397 (507)
++++.|..++.|+-.+.+ +++|+|..-. +|+||+|+..+.+.++++|+..+..|-.+..-....+...|.|+.||+++
T Consensus 391 Q~DvAd~~l~mLKGAm~e-l~~G~p~~l~-tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~E 468 (769)
T COG4230 391 QEDVADRILTMLKGAMAE-LRVGNPDRLT-TDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIE 468 (769)
T ss_pred hhhHHHHHHHHHHHHHHH-hccCCcccee-ccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEE
Confidence 999999999999999999 9999999888 99999999999999999999888777444322222211369999999997
Q ss_pred cCCCCCCCcccceeeccEEeEecC--CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCC
Q psy3132 398 NITPDMLCYTEEVFGPVAVCIKFK--TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTEA 473 (507)
Q Consensus 398 ~~~~~~~i~~~E~fgPvl~v~~~~--~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~ 473 (507)
-.+ ..-++.|+|||||.|++|+ ++++.|+-+|.++|||+.+|+|+-.+.+..+.+++++|++|||+-... -.-+
T Consensus 469 l~~--~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQ 546 (769)
T COG4230 469 LEN--LDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQ 546 (769)
T ss_pred cCC--HHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeec
Confidence 533 3446889999999999996 679999999999999999999999999999999999999999987764 3568
Q ss_pred cccCCCCCCCCCC-chHHHHHhchhceEE
Q psy3132 474 AFGGVKESGLGRE-GSRHGMEEFTQIKYM 501 (507)
Q Consensus 474 pfGG~~~SG~g~~-~g~~~l~~~t~~k~v 501 (507)
||||.+.||.|-. +|+..|..|+..+..
T Consensus 547 PFGG~GLSGTGPKAGGp~YL~Rl~~~~p~ 575 (769)
T COG4230 547 PFGGEGLSGTGPKAGGPLYLLRLVSERPW 575 (769)
T ss_pred cCCCCCCCCCCCCCCChHHHHHHHhcCCc
Confidence 9999999999965 999999999987764
|
|
| >KOG2452|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-78 Score=586.33 Aligned_cols=449 Identities=33% Similarity=0.576 Sum_probs=414.5
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.++.||+|+++.+++. +..+||.|+.+|++++.++..|+++|+.+|+.||+ .|++++..+|.+.|.++++++++++
T Consensus 421 ph~~fi~g~fv~~~~~~t~~tinp~~~~~ic~~~la~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~ 500 (881)
T KOG2452|consen 421 PHQLFIGGEFVDAEGAKTSETINPTDGSVICQVSLAQVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQ 500 (881)
T ss_pred cHhhccCcEeecccCCccccccCCCCCCeeEEeehhHhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhcc
Confidence 4578999999987765 99999999999999999999999999999999997 6999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCC--C-CceeEEEeecccEEEEEcCCcccHHhH
Q psy3132 105 QALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPV--K-SKELLMVREPLGVVGLITPWNFPMAMI 180 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 180 (507)
++|+.+.+++.|.-..-|. .-+.-.++..||++.|.+++.+..+|... + .....+.++|+|||.+|+|||||+..+
T Consensus 501 eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmml 580 (881)
T KOG2452|consen 501 EELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMML 580 (881)
T ss_pred chhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHH
Confidence 9999999999998777665 45667789999999999999997766432 2 235678999999999999999999999
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
-|+.+.+|++- ..++.+ -.|++|+++|+ |.-+++.|..||+++.|-||||+++|+.
T Consensus 581 swk~aaclaa~-----------------~~k~~e----~sgvini~~gs---gslvg~rls~hpdvrkigftgsteig~~ 636 (881)
T KOG2452|consen 581 SWKTAACLAAQ-----------------VLKFAE----LTGVVNVLPGS---GSLVGQRLSDHPDVRKIGFTGSTEVGKH 636 (881)
T ss_pred HHHHHHHHHHH-----------------Hhhhhh----hcceEEEecCC---cchhccccccCCccceeccccchHHHHH
Confidence 99999999752 112111 24899999996 7889999999999999999999999999
Q ss_pred HHHhhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc
Q psy3132 261 LYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ 339 (507)
Q Consensus 261 i~~~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~ 339 (507)
|++.|+ .+.|++.||+||++|+||+.|||+++|++....+.|++-|..|.+..|+||.++|.|+|+.+++++.++ +++
T Consensus 637 im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~-~~i 715 (881)
T KOG2452|consen 637 IMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRK-MKV 715 (881)
T ss_pred HHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHh-hcc
Confidence 999998 567999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 340 g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
|+|+|.+ ++-||.-...|+.++.+|++.++..||++.|||++.+. .|.|++|||+.++...|-+..||.||||+.|.+
T Consensus 716 g~pldr~-t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r-~g~~f~pti~s~i~d~~f~a~eesfgpim~is~ 793 (881)
T KOG2452|consen 716 GNPLDRD-TDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPR-PGFFFEPTVFTDVEDHMFIAKEESFGPVMIISR 793 (881)
T ss_pred CCccccc-ccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCC-CCcccCCeeecccchhhhhhhccccCceEEEEe
Confidence 9999999 99999999999999999999999999999999998765 699999999999999999999999999999999
Q ss_pred cCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchh
Q psy3132 420 FKT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497 (507)
Q Consensus 420 ~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~ 497 (507)
|+| +|++++.+|++++||+++|||+|...+.++++.+.+|+|+||+..-.+-..||||+|+||+|...|..+|.+|.+
T Consensus 794 f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgkd~ge~alneyl~ 873 (881)
T KOG2452|consen 794 FADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLR 873 (881)
T ss_pred cCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccccCCCCccccccccchhHHHHhhhee
Confidence 974 789999999999999999999999999999999999999999877666778999999999999999999999999
Q ss_pred ceEEEec
Q psy3132 498 IKYMCFG 504 (507)
Q Consensus 498 ~k~v~~~ 504 (507)
.|+|++.
T Consensus 874 ~ktit~e 880 (881)
T KOG2452|consen 874 VKTVTFE 880 (881)
T ss_pred eEEEEee
Confidence 9999875
|
|
| >cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-77 Score=613.69 Aligned_cols=408 Identities=18% Similarity=0.237 Sum_probs=348.7
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHH-HHHHHHHHHHHhc
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANS-FVDWFSEEARRTY 144 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~-~l~~~~~~~~~~~ 144 (507)
++.|+++|++||+.|+++|.++|.++|++++++|++++++|++++++|+|||+.+++. |+..+++ .+++++.. +..
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~ 78 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTV 78 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cce
Confidence 4789999999999999999999999999999999999999999999999999999985 7777777 77787752 222
Q ss_pred CccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH----HcCCCC
Q psy3132 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH----EAQIPK 220 (507)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~----~aGlP~ 220 (507)
+.... ..+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++. ++|+|+
T Consensus 79 g~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~ 156 (436)
T cd07122 79 GVIEE--DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPE 156 (436)
T ss_pred eeecc--CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCc
Confidence 22111 124567889999999999999999999999999999999999999999999999998888764 789999
Q ss_pred CcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHH
Q psy3132 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAA 300 (507)
Q Consensus 221 gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~ 300 (507)
|++|+++++ +.++++.|++||+|+.|+||||+.+++ .++++++|+++|+|||||+||++|||++.|++.++++
T Consensus 157 g~v~~v~g~---~~~~~~~l~~~~~v~~v~ftGs~~v~~----~a~~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~ 229 (436)
T cd07122 157 GLIQWIEEP---SIELTQELMKHPDVDLILATGGPGMVK----AAYSSGKPAIGVGPGNVPAYIDETADIKRAVKDIILS 229 (436)
T ss_pred hhEEEecCC---ChHHHHHHHcCCCcCEEEEcCCHHHHH----HHHhcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHH
Confidence 999999974 567899999999999999999999764 4556789999999999999999999999999999999
Q ss_pred HHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcc-------ccCCC-CCCCCCccCccCCHHHHHHHHHHHHHHHHC
Q psy3132 301 KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSF-------IQGDT-SKNDKCNLGPLINLAQVEKVDSIVQDAISK 372 (507)
Q Consensus 301 ~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~-------~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 372 (507)
+|.|+||.|++++|||||+++||+|+++|+++... + ++|++ .+.+ +.+||+++..+++++.++++.++.+
T Consensus 230 ~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~~~~~~~~v~~~~~~~~-~~~gp~~~~~~~~~~~~~~~~~~~~ 307 (436)
T cd07122 230 KTFDNGTICASEQSVIVDDEIYDEVRAELKRRGAY-FLNEEEKEKLEKALFDDG-GTLNPDIVGKSAQKIAELAGIEVPE 307 (436)
T ss_pred hhccCCCCCCCCCEEEEechhHHHHHHHHHHhcce-ecCHHHHHHHHHHhhcCC-CCcCccccCcCHHHHHHHcCCCCCC
Confidence 99999999999999999999999999999999887 7 88988 4566 8999999999999988888777777
Q ss_pred CCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcC----CCCcEEEEecCCHHH
Q psy3132 373 GAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS----NTGLAGYFFTNDISQ 448 (507)
Q Consensus 373 Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~----~~gl~a~v~t~d~~~ 448 (507)
|++++.++ +.+++++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.+.
T Consensus 308 ga~vl~~~---------------~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~ 371 (436)
T cd07122 308 DTKVLVAE---------------ETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEV 371 (436)
T ss_pred CCeEEEEe---------------cCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHH
Confidence 77776554 45778899987 56799999999999999999999997 899999999999999
Q ss_pred HHHHHhhcceeeEEEcCCCC-CCCCCcccCCC--------CCCCCCCchHHHHHhchhceEEEe
Q psy3132 449 AWRVGKKLQVGMVGINEGII-SHTEAAFGGVK--------ESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 449 ~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~--------~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
++++++++++|+||||+++. ..-+..+.|.. .-|.+...+.-+.++|++.|+|.+
T Consensus 372 a~~~~~~l~aG~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 372 IEEFALRMPVSRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNSTSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred HHHHHhhCCceEEEEeCCccccccCccCCCCCceeeeeccccCCCcCCCCCChHHhheeEeecc
Confidence 99999999999999998764 11111222111 112222233456788888887754
|
Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. |
| >TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-75 Score=614.45 Aligned_cols=413 Identities=19% Similarity=0.190 Sum_probs=357.3
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE-VVYANSFVDWFSEE 139 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~ 139 (507)
..+.+|++.++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++.+ .......+.+++..
T Consensus 4 ~~~~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~ 83 (488)
T TIGR02518 4 LYSIQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKD 83 (488)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999999999999999887642 22344445444432
Q ss_pred HHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH----HHHHHH
Q psy3132 140 ARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL----AALAHE 215 (507)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l----~~~l~~ 215 (507)
.+ ..+. .. ...+...+.+++|+|||++|+|||||+.++.+++++||++||+||+|||+.+|.++..+ .+++.+
T Consensus 84 ~~-~~G~-~~-~~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~e 160 (488)
T TIGR02518 84 MK-TIGI-LS-EDKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEE 160 (488)
T ss_pred Cc-ccce-ec-CCCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHH
Confidence 22 2222 11 12345678899999999999999999999999999999999999999999999999974 555689
Q ss_pred cCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHH
Q psy3132 216 AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVS 295 (507)
Q Consensus 216 aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~ 295 (507)
+|+|+|++|+|+++ +.+.++.|++||+||+|+||||+.+++.+ +...||+++|+|||+|+||++|||++.|++
T Consensus 161 aGlP~gvv~~v~g~---~~e~~~~L~~~~~vd~V~fTGs~~v~~~a----~~~~~pv~~e~gGn~p~iV~~dADld~Aa~ 233 (488)
T TIGR02518 161 AGAPEGAIGCITVP---TIEGTNELMKNKDTSLILATGGEAMVKAA----YSSGTPAIGVGPGNGPAYIERTANVKKAVR 233 (488)
T ss_pred cCcCcccEEEEcCC---CHHHHHHHHhCCCcCEEEEeCCHHHHHHH----HHcCCCEEEEcCCCCeEEEeCCCCHHHHHH
Confidence 99999999999975 56789999999999999999999977555 345699999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHH-------HHhccccCCC-CCCCCCccCccCCHHHHHHHHHHHH
Q psy3132 296 GAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVE-------ITKSFIQGDT-SKNDKCNLGPLINLAQVEKVDSIVQ 367 (507)
Q Consensus 296 ~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~-------~~~~~~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~ 367 (507)
.+++++|+|+||.|++.+|||||+++||+|+++|+++ .++ +++|+| .+++ +++||+++.++++++.++++
T Consensus 234 ~iv~sk~~~~Gq~C~a~~rllV~~~i~d~f~~~L~~~g~~~~~~~~~-~~vg~~~~~~~-~~~gp~i~~~~~~~i~~~i~ 311 (488)
T TIGR02518 234 DIIDSKTFDNGTICASEQSIIVEECNKDAVVEELKKQGGYFLTAEEA-EKLGKFILRPN-GTMNPQIVGKSPQVIANLAG 311 (488)
T ss_pred HHHHHHhcCCCCCCCCCCEEEEeHHHHHHHHHHHHHhhhhhcCHHHH-HhhcccccCCC-CCcCcccccchHHHHHHHhc
Confidence 9999999999999999999999999999999999998 788 999996 5677 89999999999999999999
Q ss_pred HHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc----CCCCcEEEEec
Q psy3132 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN----SNTGLAGYFFT 443 (507)
Q Consensus 368 ~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a~v~t 443 (507)
.++.+|+++++||.. .+++++++ .+|.||||++|++|+|+||||+++|+ ++|||+++|||
T Consensus 312 ~av~~gakll~gg~~---------------~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T 375 (488)
T TIGR02518 312 LTVPEDAKVLIGEQN---------------GVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHS 375 (488)
T ss_pred cccCCCCEEEEeCCC---------------CCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEe
Confidence 999999999999852 24567776 79999999999999999999999887 79999999999
Q ss_pred CCHHHHHHHHhhcceeeEEEcCCCC---------CCCCC--cccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 444 NDISQAWRVGKKLQVGMVGINEGII---------SHTEA--AFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 444 ~d~~~~~~~~~~l~~G~v~iN~~~~---------~~~~~--pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+|.+.+++|++++++|+|+||++.. ..+.+ -||+++.++.. .+-+++++++.|+|..+
T Consensus 376 ~d~~~a~~f~~~i~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~---~~v~~~~l~~~k~v~~~ 444 (488)
T TIGR02518 376 ENKDIVREFALKKPVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS---DNITPENLINIRRVAYG 444 (488)
T ss_pred CCHHHHHHHHHhCCeeEEEEcCCCcccccccccCCCccccccccccCCCcCC---CCCCHHHhheeeEEEec
Confidence 9999999999999999999996542 12222 25665555444 38899999999998653
|
|
| >PLN02418 delta-1-pyrroline-5-carboxylate synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-76 Score=641.14 Aligned_cols=382 Identities=19% Similarity=0.240 Sum_probs=340.7
Q ss_pred HHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHcC--CChhhh----hHhHHHHHHH
Q psy3132 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIM------TQESG--KPPTES----LGEVVYANSF 132 (507)
Q Consensus 65 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~G--k~~~~a----~~ev~~~~~~ 132 (507)
+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++ ++|+| ||..++ ..|+..+++.
T Consensus 294 ~~~~~~~~aA~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~ 373 (718)
T PLN02418 294 VGAREMAVAARESSRKLQALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAAS 373 (718)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHH
Confidence 45999999999999999999999999999999999999999999996 77999 887776 4699999999
Q ss_pred HHHHHHHHHHhcCcccc--CCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHH
Q psy3132 133 VDWFSEEARRTYGELVP--SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210 (507)
Q Consensus 133 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~ 210 (507)
++|+++.. +..+...+ ....+...++.++|+|||++|+||| |+.+. ++++|||++||+||+|||+.+|+++..|+
T Consensus 374 ~~~~a~~~-~~~g~~~~~~~~~~~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~ 450 (718)
T PLN02418 374 IRQLADME-DPIGRVLKRTEVADGLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILH 450 (718)
T ss_pred HHHHhcCc-cccCccccccccCCCceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHH
Confidence 99999873 33343332 1122444688999999999999999 99999 99999999999999999999999999999
Q ss_pred HHHHHcCCCCCc----EEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcC
Q psy3132 211 ALAHEAQIPKGV----LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYS 286 (507)
Q Consensus 211 ~~l~~aGlP~gv----v~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~ 286 (507)
+++.++ +|+|+ +|+|++ +.++++.|..||.|++|+||||+..++.+ ++.++||+++|+|||||+||++
T Consensus 451 ~l~~eA-lP~gv~~~v~nvv~g----~~~~g~~L~~~~~v~~V~FTGSt~~i~~~---aa~~~k~v~lELGGk~p~iV~~ 522 (718)
T PLN02418 451 KVITDA-IPKTVGGKLIGLVTS----RDEIPDLLKLDDVIDLVIPRGSNKLVSQI---KASTKIPVLGHADGICHVYVDK 522 (718)
T ss_pred HHHHHH-ccccCCcceEEEeCC----cHHHHHHHhhCCCCCEEEEeCCHHHHHHH---HHhcCCCEEEeCCCcceEEEeC
Confidence 999999 99996 999996 45789999999999999999999654444 5556899999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHH
Q psy3132 287 NANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIV 366 (507)
Q Consensus 287 daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i 366 (507)
|||++.|++.+++++|.| ||.|++.+|+|||+++||+ | .+.++|
T Consensus 523 DADld~A~~~i~~~~~~n-GQ~C~a~~RllVh~~i~d~---------------G--------------------~~~~~i 566 (718)
T PLN02418 523 SADMDMAKRIVVDAKTDY-PAACNAMETLLVHKDLVQN---------------G--------------------GLNDLL 566 (718)
T ss_pred CCCHHHHHHHHHHHhCCC-CCccccCcEEEEecccccc---------------c--------------------cHHHHH
Confidence 999999999999999999 9999999999999999997 1 136788
Q ss_pred HHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCH
Q psy3132 367 QDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446 (507)
Q Consensus 367 ~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~ 446 (507)
++|+++|+++ +||.... | ++. + ++|++++||+||||++|.+|+|+||||+++|+++|||+++|||+|.
T Consensus 567 ~~a~~~Ga~l-~Gg~~~~---g------~l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~ 634 (718)
T PLN02418 567 VALRSAGVTL-YGGPRAS---K------LLN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDS 634 (718)
T ss_pred HHHHHCCCEE-ECCcccc---C------eeC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCH
Confidence 9999999999 6876431 3 233 3 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCC--CCCc--hHHHHHhchhceEEEecc
Q psy3132 447 SQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGL--GREG--SRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 447 ~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~--g~~~--g~~~l~~~t~~k~v~~~~ 505 (507)
+.+.++++++++|.||||+++...+..||||+|+||+ ||++ |++||++||+.|+|.+++
T Consensus 635 ~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~ 697 (718)
T PLN02418 635 EVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGN 697 (718)
T ss_pred HHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECC
Confidence 9999999999999999998876666789999999999 9885 999999999999998863
|
|
| >KOG2455|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-76 Score=567.12 Aligned_cols=468 Identities=25% Similarity=0.336 Sum_probs=428.2
Q ss_pred cCCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHH-hcH
Q psy3132 27 STYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELE-GNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~-~~~ 104 (507)
....+..|||+.+.+.......+|.+ ...++.+..++.+++++||++|.+|++.|..+|..+|.+|++|.|++++ +++
T Consensus 57 ~~evP~vIg~~~v~t~~~q~q~~P~~hq~~lA~~~yA~~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr 136 (561)
T KOG2455|consen 57 PLEVPLVIGDKEVYTNDEQYQVCPHNHQHVLAKVYYATKKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYR 136 (561)
T ss_pred ceeccEEECCeeeecCCcccccCCchhhhhhhheeeccHHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHH
Confidence 45668999999998887788899998 5689999999999999999999999999999999999999999999999 778
Q ss_pred HHHHHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecc-cEEEEEcCCcccHHhHHh
Q psy3132 105 QALAEIMTQESGKPPTESLGE-VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPL-GVVGLITPWNFPMAMITR 182 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~-Gvv~~i~p~n~P~~~~~~ 182 (507)
-+|....+.-.||...+|..+ +.+.++++|+.+..+..+.........++..+..+++|+ |.|++|+||||-....-.
T Consensus 137 ~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~ns~~yRpleGFVaAisPFnftAI~gnL 216 (561)
T KOG2455|consen 137 YDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTWNSMEYRPLEGFVAAISPFNFTAIGGNL 216 (561)
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCCcceeeccccceeEEecccceeeecccc
Confidence 889989999999999999544 557788899999988888775444445677778888898 999999999998877777
Q ss_pred hHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 183 ~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
..+||| +||+|++|||..+.++++++.++|+|||||+|++|+|+++ +...++.+..+|++.++.||||+.+-+.++
T Consensus 217 a~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad---~~~f~dtita~~hfaglnftgS~~~fk~lw 292 (561)
T KOG2455|consen 217 AGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPAD---GPLFGDTITASPHFAGLNFTGSVPTFKHLW 292 (561)
T ss_pred ccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCC---CCeecceeccCcccceeeeecccHHHHHHH
Confidence 788888 5999999999999999999999999999999999999996 788999999999999999999999999999
Q ss_pred Hhhcccc------cccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhc
Q psy3132 263 SHCSQGI------KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336 (507)
Q Consensus 263 ~~~~~~~------~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 336 (507)
++.++++ .+++.|+||||.-+|+++||++.++...++++|..+||.|.+.+|+||+++.++.+.+.|.+..++
T Consensus 293 k~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~wp~i~e~l~~~~~q- 371 (561)
T KOG2455|consen 293 KKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLWPQIREELVEEHSQ- 371 (561)
T ss_pred HHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhcHHHHHHHHHHHhh-
Confidence 9988654 689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCC-CCCCCCccCccCCHHHHHHHHHHHHHHHHC-CCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeecc
Q psy3132 337 FIQGDT-SKNDKCNLGPLINLAQVEKVDSIVQDAISK-GAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPV 414 (507)
Q Consensus 337 ~~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv 414 (507)
+++|+| .|-. +++||+|+.+.+.|++++|+.|+.. ..++++||+.++. .|+|+.|||+...+|.+++|.||+||||
T Consensus 372 ~~igd~~~d~~-~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS-~G~FV~PTiv~~kdP~~pim~ee~fGPv 449 (561)
T KOG2455|consen 372 LKIGDPVIDFS-TFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDS-TGYFVEPTIVLSKDPKDPIMTEEIFGPV 449 (561)
T ss_pred cccCCcccccc-chhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCC-CCeeecceEEEccCCCcchhhhhccCce
Confidence 999998 5666 9999999999999999999999864 6799999999875 7999999999999999999999999999
Q ss_pred EEeEecCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCCC--CCCCcccCCCCCCCCC-C
Q psy3132 415 AVCIKFKT--EEESLCVA-NNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIIS--HTEAAFGGVKESGLGR-E 486 (507)
Q Consensus 415 l~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~~--~~~~pfGG~~~SG~g~-~ 486 (507)
|+|+.|+| .+|+++++ |.++|||+.+||++|.+.+.+..++|+ +|+.|||+-.+. -...||||-+.||... .
T Consensus 450 LsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTNDKa 529 (561)
T KOG2455|consen 450 LSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTNDKA 529 (561)
T ss_pred eEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCCCC
Confidence 99999975 68999998 668999999999999999999999887 999999997764 3678999999999875 4
Q ss_pred chHHHHHhchhceEE
Q psy3132 487 GSRHGMEEFTQIKYM 501 (507)
Q Consensus 487 ~g~~~l~~~t~~k~v 501 (507)
||++-+..|+.+++|
T Consensus 530 Ggp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 530 GGPHYLLRWTSPLSI 544 (561)
T ss_pred CCceEEEeecCcchh
Confidence 999999999998876
|
|
| >PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-74 Score=641.74 Aligned_cols=418 Identities=17% Similarity=0.214 Sum_probs=362.1
Q ss_pred EecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHH
Q psy3132 58 DVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWF 136 (507)
Q Consensus 58 ~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~ 136 (507)
.+...+.+|+++++++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..+++. +...+...++++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~ 84 (862)
T PRK13805 5 EMAVTNVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNS 84 (862)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999999999998874 333333333333
Q ss_pred HHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH--
Q psy3132 137 SEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH-- 214 (507)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~-- 214 (507)
.. .++..+. .. .......+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..+++++.
T Consensus 85 ~~-~~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~ 161 (862)
T PRK13805 85 YK-DEKTVGV-IE-EDDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDA 161 (862)
T ss_pred hc-CCCcccc-cC-cCCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHH
Confidence 22 1112221 11 1224557889999999999999999999999999999999999999999999999998888865
Q ss_pred --HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHH
Q psy3132 215 --EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292 (507)
Q Consensus 215 --~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~ 292 (507)
++|+|+|+||+|+++ +.+.++.|++|++||.|+||||+.+++ .++.+++|+++|+|||||+||++|||++.
T Consensus 162 l~~aG~p~g~v~vv~g~---~~~~~~~L~~~~~vd~I~fTGs~~v~~----~a~~~~~pv~~e~gGk~p~iV~~dADl~~ 234 (862)
T PRK13805 162 AVAAGAPKDIIQWIEEP---SVELTNALMNHPGIALILATGGPGMVK----AAYSSGKPALGVGAGNVPAYIDKTADIKR 234 (862)
T ss_pred HHHcCcCcccEEEecCC---CHHHHHHHHcCCCccEEEecCCHHHHH----HHHhcCCCeEEECCCCCeEEEeCCCCHHH
Confidence 689999999999974 567899999999999999999999754 45667899999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC
Q psy3132 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372 (507)
Q Consensus 293 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 372 (507)
|++.|++++|.|+||.|++++|||||+++||+|+++|+++ .+|++++.+++++.++++++++.
T Consensus 235 Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d~f~~~l~~~-----------------g~~l~~~~~~~~v~~~i~~a~~~ 297 (862)
T PRK13805 235 AVNDILLSKTFDNGMICASEQAVIVDDEIYDEVKEEFASH-----------------GAYFLNKKELKKLEKFIFGKENG 297 (862)
T ss_pred HHHHHHHhhhccCCCccCCCceEEEehhhHHHHHHHHHHh-----------------CCeeCCHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999999999999999998754 24799999999999999988766
Q ss_pred CCeE-EeCCCccc--cCCCceeeceE------eecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc----CCCCcEE
Q psy3132 373 GAKV-ILGGGKVT--KLGSKFFAPTI------LTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN----SNTGLAG 439 (507)
Q Consensus 373 Ga~v-~~gg~~~~--~~~g~~~~Ptv------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~----~~~gl~a 439 (507)
|+.. +.||.... ...|+|+.||+ +.++++++++++ |.||||++|++|+|+||||+++|+ ++|||++
T Consensus 298 ~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~ 376 (862)
T PRK13805 298 ALNADIVGQSAYKIAEMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTA 376 (862)
T ss_pred CcCccccCCCHHHHHHHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEE
Confidence 5532 45664311 11488899997 778999999887 789999999999999999999988 5899999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCC----------CCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGI----------ISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~----------~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+|||+|.+.+++|++++++|+|+||.+. ...+.+|||| |.||.|+++|+.|+++|++.|+|..+
T Consensus 377 ~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~-G~~g~~~~~g~~g~~~~~~~k~v~~~ 450 (862)
T PRK13805 377 VIYTNDDELIKEFGLRMKACRILVNTPSSQGGIGDLYNKLAPSLTLGC-GSWGGNSVSENVGAKHLLNIKTVAKR 450 (862)
T ss_pred EEECCCHHHHHHHHhhCCccEEEEeCCccccccccccCCcCccccccc-cCCCCCcCCCCCCHHHhheeeeeeec
Confidence 9999999999999999999999999875 2467899997 99999999999999999999998754
|
|
| >KOG2453|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-75 Score=541.67 Aligned_cols=481 Identities=31% Similarity=0.507 Sum_probs=451.0
Q ss_pred hhHHHHHhhhccCCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHH
Q psy3132 16 MHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKR 95 (507)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~ 95 (507)
..-.|++++....++.-..+|+|-.++.-+..++|+++++|+.|..++.+|.+.+++.|++|++.|...|...|.++.+.
T Consensus 6 ~~y~flkelglte~n~gvy~gkw~a~g~vv~t~~pann~pia~v~~asv~dye~~~k~a~ea~kiw~~vpapkrgeivrq 85 (507)
T KOG2453|consen 6 SKYGFLKELGLTENNAGVYHGKWAASGQVVQTFAPANNSPIANVQNASVQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQ 85 (507)
T ss_pred chhHHHHHhCCcccccceeeeeeccCCceeEeecCCCCChhHHHhhccHHHHHHHHHHHHHHHHHHhcCCCCccchHHHH
Confidence 33457777777666666678899887766999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcc
Q psy3132 96 WLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNF 175 (507)
Q Consensus 96 ~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 175 (507)
+.|.|+..-+-|.+++++|+||...|..+||..-++.++|.....+.+.+...|++.++.-....|.|+|+|.+|+.|||
T Consensus 86 igdalr~klq~lg~lvslemgkilaegvgevqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnf 165 (507)
T KOG2453|consen 86 IGDALRTKLQNLGKLVSLEMGKILAEGVGEVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNF 165 (507)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHhhhcchhHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccC
Confidence 99999999999999999999999999999999999999999999999999999988888888899999999999999999
Q ss_pred cHHhHHhhHHhHhhcCCeEEeccCCCChHHHHH----HHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEE
Q psy3132 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALA----LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISF 251 (507)
Q Consensus 176 P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~----l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~f 251 (507)
|....-|.-+.|+.+||+|++||.+.+|+++.. +.+.|.+--+|.+......| +.+.++++....+++.+.|
T Consensus 166 pcavygwnnaiaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG----~aDigrAaakdgRvnlvsf 241 (507)
T KOG2453|consen 166 PCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCG----GADIGRAAAKDGRVNLVSF 241 (507)
T ss_pred CceeeccCchhhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeeccc----chhhhhhccccCceeeccc
Confidence 999999999999999999999999999988654 45667777899999998886 7899999999999999999
Q ss_pred eCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHH
Q psy3132 252 TGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKV 331 (507)
Q Consensus 252 tGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~ 331 (507)
|||+..++.+.+....+..+..|||||+|+.||.+|||+..++...++++...+||+|+..+|+++|+++||+++++|++
T Consensus 242 tGssQvgKsvgq~vqarfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkk 321 (507)
T KOG2453|consen 242 TGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKK 321 (507)
T ss_pred ccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCccccee
Q psy3132 332 EITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVF 411 (507)
Q Consensus 332 ~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~f 411 (507)
..++ +++|.|+|+. +.+|||.++++..+++.-+++++.+|.++++||+..+. +|+|+.|||++ ...|.++..+|.|
T Consensus 322 ayaq-~~ignpld~n-tl~gplht~qav~~f~~~veeak~~ggki~yggkv~er-~gnfveptivt-l~hda~vv~~etf 397 (507)
T KOG2453|consen 322 AYAQ-FEIGNPLDSN-TLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLER-DGNFVEPTIVT-LKHDAPVVLRETF 397 (507)
T ss_pred HHHh-eecCCcCCCC-ceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeecc-CCCcccceEEE-ecCCcchhhhhhc
Confidence 9999 9999999999 99999999999999999999999999999999998765 69999999997 8899999999999
Q ss_pred eccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh--cceeeEEEcCCCCC-CCCCcccCCCCCCCCCCch
Q psy3132 412 GPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKK--LQVGMVGINEGIIS-HTEAAFGGVKESGLGREGS 488 (507)
Q Consensus 412 gPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~--l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g 488 (507)
.|||.|.+|.+++||+++-|..+.||++||||+|..++.++..- -++|.|+||-++.. ..+-.|||.|.+|-||+.|
T Consensus 398 apilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsgaeiggafggek~tgggresg 477 (507)
T KOG2453|consen 398 APILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGRESG 477 (507)
T ss_pred cceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCchhhcccccCccccCCCcccC
Confidence 99999999999999999999999999999999999999999864 57999999987764 4567899999999999999
Q ss_pred HHHHHhchhceEEEec
Q psy3132 489 RHGMEEFTQIKYMCFG 504 (507)
Q Consensus 489 ~~~l~~~t~~k~v~~~ 504 (507)
.++.++|+++.+++++
T Consensus 478 sdswkqymrrstctin 493 (507)
T KOG2453|consen 478 SDSWKQYMRRSTCTIN 493 (507)
T ss_pred chHHHHHHhhceeeee
Confidence 9999999999998875
|
|
| >cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-72 Score=577.36 Aligned_cols=373 Identities=19% Similarity=0.215 Sum_probs=335.7
Q ss_pred HHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-----------HhHHHHHHHHHHHHHHH
Q psy3132 72 MSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-----------GEVVYANSFVDWFSEEA 140 (507)
Q Consensus 72 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-----------~ev~~~~~~l~~~~~~~ 140 (507)
++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||+.++. .|+..+++.+++++...
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~ 80 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASV 80 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhc
Confidence 3689999999999999999999999999999999999999999999965432 48889999999988765
Q ss_pred HHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc---C
Q psy3132 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA---Q 217 (507)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a---G 217 (507)
.+..+...+. ....+++++|+|||++|+|||||+. +++++++||++||+||+|||+.+|+++..+.+++.++ |
T Consensus 81 ~~~~~~~~~~---~~~~~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g 156 (397)
T cd07077 81 GHIQDVLLPD---NGETYVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAH 156 (397)
T ss_pred CcccceEecC---CCceEEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcC
Confidence 5444432221 2357899999999999999999999 9999999999999999999999999999999999987 9
Q ss_pred CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHH
Q psy3132 218 IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGA 297 (507)
Q Consensus 218 lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i 297 (507)
+|+++++++++. +.+.++.|+.||++|.|+||||+.+++.+.+.+. .+|+++|+||++|+||++|||++.|++.+
T Consensus 157 ~p~~~v~~v~~~---~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~--~~~~~~~~gg~~~~iv~~dad~~~a~~~~ 231 (397)
T cd07077 157 GPKILVLYVPHP---SDELAEELLSHPKIDLIVATGGRDAVDAAVKHSP--HIPVIGFGAGNSPVVVDETADEERASGSV 231 (397)
T ss_pred CCCceEEEecCC---CHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCC--CCceEEecCCcceEEEcCCCCHHHHHHHH
Confidence 999999999974 5678999999999999999999999999998884 78999999999999999999999999999
Q ss_pred HHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEE
Q psy3132 298 MAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVI 377 (507)
Q Consensus 298 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~ 377 (507)
++++|.| ||.|+++++||||+++||+|+++|++++++ +|++++
T Consensus 232 ~~~~~~~-GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~------------------------------------~G~~~~ 274 (397)
T cd07077 232 HDSKFFD-QNACASEQNLYVVDDVLDPLYEEFKLKLVV------------------------------------EGLKVP 274 (397)
T ss_pred HHhhccC-CccCCCCeEEEEehhhhHHHHHHHHHHHHh------------------------------------cCcCcC
Confidence 9999999 999999999999999999999999877643 466666
Q ss_pred eCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHH----HHHHHHhcCCCCcEEEEecCCHHHHHHHH
Q psy3132 378 LGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE----ESLCVANNSNTGLAGYFFTNDISQAWRVG 453 (507)
Q Consensus 378 ~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~----eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 453 (507)
.||+ +.|+.|| +++++.++|+||||++|++|+|.| +|++++|+++|||+++|||+|.+.+++++
T Consensus 275 ~g~~------~~~~~pt------~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~ 342 (397)
T cd07077 275 QETK------PLSKETT------PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFV 342 (397)
T ss_pred CCce------eeEEecc------CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHH
Confidence 6653 5677787 788999999999999999999996 66678899999999999999999999999
Q ss_pred hhcceeeEEEcCCCCCC--CCCcccCCC--CCCCCCCch-HHHHHhchhceEEE
Q psy3132 454 KKLQVGMVGINEGIISH--TEAAFGGVK--ESGLGREGS-RHGMEEFTQIKYMC 502 (507)
Q Consensus 454 ~~l~~G~v~iN~~~~~~--~~~pfGG~~--~SG~g~~~g-~~~l~~~t~~k~v~ 502 (507)
+++++|+|+||++.... ..+||||.| .||+|+++| .+++++|++.|+|.
T Consensus 343 ~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g~~~g~~~~~~~~~~~k~v~ 396 (397)
T cd07077 343 QYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMNNIFGAGVGHDALRPLKRLV 396 (397)
T ss_pred HhCCEEEEEEeCCccCCCccccCCCcceEEEccccCCCCCCCChHHhcceeEee
Confidence 99999999999887643 668999999 899999999 99999999999874
|
The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. |
| >TIGR00407 proA gamma-glutamyl phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-71 Score=568.60 Aligned_cols=376 Identities=18% Similarity=0.176 Sum_probs=322.9
Q ss_pred HHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHH------HHHHcCCCh------hhhhHhHHHHHHHHHHHHHHHH
Q psy3132 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEI------MTQESGKPP------TESLGEVVYANSFVDWFSEEAR 141 (507)
Q Consensus 74 A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~------~~~e~Gk~~------~~a~~ev~~~~~~l~~~~~~~~ 141 (507)
|++||+.|++++.++|.++|+++++.|++++++|+++ +++|+|||. .+++.|+..+++.++++++.++
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999999999 999999994 3567899999999999998876
Q ss_pred HhcCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHH----HHH
Q psy3132 142 RTYGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL----AHE 215 (507)
Q Consensus 142 ~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~----l~~ 215 (507)
.. +...+. ..++...+++++|+|||++|+||| | ..+++++++||++||+||+|||+.+|.++..++++ |.+
T Consensus 81 ~~-g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~e 157 (398)
T TIGR00407 81 PV-GKVIDGRELDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQ 157 (398)
T ss_pred CC-cccccceecCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHH
Confidence 53 433332 123557789999999999999997 6 67889999999999999999999999999999999 569
Q ss_pred cCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHH
Q psy3132 216 AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVS 295 (507)
Q Consensus 216 aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~ 295 (507)
+|+|+|++|+|+++ ++.++++.|..||+|++|+||||+.+++.+++.. .+|+++|+|||||+||++|||++.|++
T Consensus 158 aGlP~gvv~~v~g~--~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~---~~~~~~e~gGk~p~iV~~dADl~~Aa~ 232 (398)
T TIGR00407 158 TGLPVGAVQLIETP--SRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTS---TIPVLGHGDGICHIYLDESADLIKAIK 232 (398)
T ss_pred cCCChhHEEEecCC--CHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhC---CCCEEEecCCcceEEEeCCCCHHHHHH
Confidence 99999999999974 1345788999999999999999999999998753 589999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCe
Q psy3132 296 GAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAK 375 (507)
Q Consensus 296 ~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 375 (507)
.+++++|. +||.|++++|+|||+++||+|+++|++++.+ +++ .+++ .+.+++++. .
T Consensus 233 ~iv~~~~~-~GQ~C~a~~rv~V~~~v~d~f~~~l~~~~~~-~~~---------~~~~------~~~i~~~v~----~--- 288 (398)
T TIGR00407 233 VIVNAKTQ-RPSTCNAIETLLVNKAIAREFLPVLENQLLE-KGV---------TIHA------DAYALKLLE----L--- 288 (398)
T ss_pred HHHhhhcC-CCCcccccceEEEeHHHHHHHHHHHHHHHHh-cCC---------EEec------CHHHHHHHh----c---
Confidence 99999996 4999999999999999999999999999987 532 2222 133443332 1
Q ss_pred EEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhh
Q psy3132 376 VILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKK 455 (507)
Q Consensus 376 v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~ 455 (507)
| + ||++ + .++++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++|+++
T Consensus 289 ----g-------~----~tv~-~--~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~ 350 (398)
T TIGR00407 289 ----G-------P----ATEA-I--VCKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNG 350 (398)
T ss_pred ----c-------C----cccc-c--cccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHh
Confidence 1 1 3554 2 3378999999999999999999999999999999999999999999999999999
Q ss_pred cceeeEEEcCCCCCCCCCcccCCCCCC----CCCCchHHHHHhchhce
Q psy3132 456 LQVGMVGINEGIISHTEAAFGGVKESG----LGREGSRHGMEEFTQIK 499 (507)
Q Consensus 456 l~~G~v~iN~~~~~~~~~pfGG~~~SG----~g~~~g~~~l~~~t~~k 499 (507)
+++|.|+||++....+..|||=-.+-| ....+|+.+++.||..|
T Consensus 351 i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 351 VDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred CCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 999999999988777778998333323 34459999999999876
|
The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif. |
| >cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-70 Score=559.76 Aligned_cols=364 Identities=47% Similarity=0.759 Sum_probs=342.8
Q ss_pred HHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCC
Q psy3132 73 SAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152 (507)
Q Consensus 73 ~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 152 (507)
+|++|+++|++++.++|.++|+++++.|.+++++|+++++.|+|||..+++.|+..+++.++++++......+...+...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIEEALGEVARAIDTFRYAAGLADKLGGPELPSPD 81 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC
Confidence 68899999999999999999999999999999999999999999999999999999999999999988776553333334
Q ss_pred CCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q psy3132 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTN 232 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~ 232 (507)
.+...+.+++|+|||++|.|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|++++++++++
T Consensus 82 ~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~--- 158 (367)
T cd06534 82 PGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGG--- 158 (367)
T ss_pred CCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcC---
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred chHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccC
Q psy3132 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312 (507)
Q Consensus 233 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 312 (507)
+.+..+.|+.|+++|.|.||||+.+++.|.+.++++++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++
T Consensus 159 ~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~ 238 (367)
T cd06534 159 GDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAA 238 (367)
T ss_pred chhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCC
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceee
Q psy3132 313 NRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392 (507)
Q Consensus 313 ~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~ 392 (507)
++||||++++++|+++|+
T Consensus 239 ~~v~v~~~~~~~f~~~l~-------------------------------------------------------------- 256 (367)
T cd06534 239 SRLLVHESIYDEFVEKLV-------------------------------------------------------------- 256 (367)
T ss_pred cEEEEcHHHHHHHHHhhc--------------------------------------------------------------
Confidence 999999999999998874
Q ss_pred ceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CC
Q psy3132 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HT 471 (507)
Q Consensus 393 Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~ 471 (507)
||+.+++++++++++|+||||++|++|++.+|+++++|++++||++||||+|...++++++++++|+|+||+++.. .+
T Consensus 257 -tl~~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~ 335 (367)
T cd06534 257 -TVLVDVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGP 335 (367)
T ss_pred -eeeeCCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCC
Confidence 5566777888999999999999999999999999999999999999999999999999999999999999998876 78
Q ss_pred CCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 472 EAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 472 ~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
.+||||.|.||+|+++|++++++||+.|+|.
T Consensus 336 ~~pfgg~~~sG~g~~~g~~~~~~~~~~k~i~ 366 (367)
T cd06534 336 EAPFGGVKNSGIGREGGPYGLEEYTRTKTVV 366 (367)
T ss_pred CCCCCCcccCccCCCChHHHHHHhceEEEEe
Confidence 8999999999999999999999999999874
|
The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri |
| >TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-71 Score=600.68 Aligned_cols=378 Identities=16% Similarity=0.179 Sum_probs=325.8
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH----------------hHHHH
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG----------------EVVYA 129 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~----------------ev~~~ 129 (507)
+++..+++|++||+.|+.++.++|.++|++++++|++++++|+ .++||+..+++. |+..+
T Consensus 287 ~~~~~~~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~eei~----~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~ 362 (715)
T TIGR01092 287 GERDMAVAARESSRMLQALSSEQRKEILHDIADALEDNEDEIL----AENKKDVAAAQGAGYAASLVARLSMSPSKISSL 362 (715)
T ss_pred HHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHH----HHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHH
Confidence 4888899999999999999999999999999999999999997 577888876654 47778
Q ss_pred HHHHHHHHHHHHHhcCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHH
Q psy3132 130 NSFVDWFSEEARRTYGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207 (507)
Q Consensus 130 ~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~ 207 (507)
++.++++++ ..+..+...+. ...+...+.+++|+|||++|+||| |+.+ ++++++||++||+||+|||+.+|.++.
T Consensus 363 ~~~l~~~a~-~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~ 439 (715)
T TIGR01092 363 AISLRQLAA-MEDPIGRVLKRTRIADNLILEKTSVPIGVLLIVFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNA 439 (715)
T ss_pred HHHHHHHhc-CCCcccccccccccCCCceeEEEEeeceEEEEEeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHH
Confidence 888888877 33322322211 112334578899999999999999 9999 689999999999999999999999999
Q ss_pred HHHHHHHHcCCCCC----cEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEE
Q psy3132 208 ALAALAHEAQIPKG----VLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283 (507)
Q Consensus 208 ~l~~~l~~aGlP~g----vv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 283 (507)
.|++++.++ +|+| ++++|++ +.++++.|..|+.+|.|+||||+.+|+.|++.++ ||+++|+|||||+|
T Consensus 440 ~l~~l~~~a-lp~g~~~~~~~~v~~----~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~---~pv~lElgGk~p~i 511 (715)
T TIGR01092 440 ILHKVITEA-IPIHVGKKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTK---IPVLGHADGICHVY 511 (715)
T ss_pred HHHHHHHHH-cCCCCCCcEEEEeCC----hHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCC---CCEEEEcCCcceEE
Confidence 999999999 9987 6899984 4677889999999999999999999999998875 99999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHH
Q psy3132 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVD 363 (507)
Q Consensus 284 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~ 363 (507)
|++|||++.|++.++.++|.+ ||.|+|++|||||+++||+ . .+.
T Consensus 512 V~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~----------~-------------------------~~~ 555 (715)
T TIGR01092 512 VDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN----------G-------------------------LLD 555 (715)
T ss_pred ECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc----------h-------------------------hHH
Confidence 999999999987666666554 9999999999999999985 0 134
Q ss_pred HHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEec
Q psy3132 364 SIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443 (507)
Q Consensus 364 ~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t 443 (507)
++++.++++|++++ ||...+ .|+. ..++++++++||+||||++|++|+|+||||+++|+++|||++||||
T Consensus 556 ~~v~~~~~~Ga~l~-Gg~~~~----~~~~-----~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift 625 (715)
T TIGR01092 556 DLIDMLRTEGVTIH-GGPRFA----AYLT-----FNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVT 625 (715)
T ss_pred HHHHHHHHCCCEEE-CCcchh----heec-----cCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEe
Confidence 56677777899985 775431 2332 1357899999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCC----CchHHHHHhchhceEEEec
Q psy3132 444 NDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGR----EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 444 ~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~----~~g~~~l~~~t~~k~v~~~ 504 (507)
+|.+.+++|++++++|.|+||+++...+..||||+|+||+|+ ++|++++++||+.|+|.++
T Consensus 626 ~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g 690 (715)
T TIGR01092 626 EDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRG 690 (715)
T ss_pred CCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEEC
Confidence 999999999999999999999876556678999999999996 3899999999999999875
|
This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region. |
| >cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=307.57 Aligned_cols=364 Identities=14% Similarity=0.083 Sum_probs=268.1
Q ss_pred CHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHh----cHHHHHHHHHHHcCCChhhhhHhHHHHHHHHH--HH
Q psy3132 63 GVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEG----NKQALAEIMTQESGKPPTESLGEVVYANSFVD--WF 136 (507)
Q Consensus 63 ~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~----~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~--~~ 136 (507)
+.++++..++..+...+....++.++..+.+.++++.+.. .+.+..+.+...+|.+..+.+..+......++ ..
T Consensus 3 ~~~~~~~~~~~l~~~~~~~~~~~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r~~l 82 (422)
T cd07080 3 SAPDLDALIEELRLNRRALAALPVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRRENL 82 (422)
T ss_pred CHHHHHHHHHHHHhhHHhHhcCCHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCHHHH
Confidence 4556677777777666677788888888888888888853 35566777778888887666666555555553 11
Q ss_pred HHHHH-Hhc-CccccCCCC-CceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHH
Q psy3132 137 SEEAR-RTY-GELVPSPVK-SKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALA 213 (507)
Q Consensus 137 ~~~~~-~~~-~~~~~~~~~-~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l 213 (507)
..... .+. ...+....+ +...++.++|+|++++|+|||||+ ..++.+++||++||++|+|||+.+|.++..|.++|
T Consensus 83 ~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l 161 (422)
T cd07080 83 ERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVPL-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSL 161 (422)
T ss_pred HHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCccc-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHH
Confidence 11111 121 111121222 456688999999999999999999 79999999999999999999999999999999999
Q ss_pred HHcCCCC----CcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC-cEEEcCCC
Q psy3132 214 HEAQIPK----GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA-PFIVYSNA 288 (507)
Q Consensus 214 ~~aGlP~----gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~-~~iV~~da 288 (507)
.++ +|+ +.++++..+| ++.++++.|++++ |.|+||||+.+++.|.+.++++ +..+|+|||+ ++|+.+++
T Consensus 162 ~~~-~p~~~~~~~~~vv~~~g-~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~--~~~Le~Ggk~s~~vi~~~a 235 (422)
T cd07080 162 ADV-DPNHPLTDSISVVYWPG-GDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPG--CRLIDFGPKYSFAVIDREA 235 (422)
T ss_pred Hhc-CCCCcccceEEEEEecC-CchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCC--CeeeecCCceeEEEecHHh
Confidence 999 788 8899985321 1445888899887 9999999999999999998855 4699999995 45556668
Q ss_pred ----CHHHHHHHHHHHHHHhcCCCcccCcceechhhh---HHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHH
Q psy3132 289 ----NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV---FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 289 ----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i---~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
|++.+++.+++++|.++||.|+|+++||||+++ +++|.++|.+++++ +....|... + +.....+
T Consensus 236 ~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~f~~~l~~~l~~-~~~~~p~~~-------~-~~~~~~~ 306 (422)
T cd07080 236 LESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELREFAEALAAALER-LPRRYPALS-------L-SAAESAK 306 (422)
T ss_pred hccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHHHHHHHHHHHHH-HHHhCCCCC-------C-CHHHHHH
Confidence 999999999999999999999999999999999 99999999999998 654333221 1 3444444
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+...-..+...+.+....+. .++ ||+....+. +. ....+-.+.|+++++++|++..++. |--|.++
T Consensus 307 ~~~~r~~~~~~~~~~~~~~~-----~~~----~v~~~~~~~--~~-~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~ 372 (422)
T cd07080 307 IARARLEAEFYELKGGVSRD-----LGW----TVIISDEIG--LE-ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGL 372 (422)
T ss_pred HHHHHHHHHHHHHhcCCCCC-----CCe----EEEEeCCCC--cc-CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEe
Confidence 44433333332322111111 233 455433322 21 1456688999999999999999986 7789999
Q ss_pred ecCCHHHHHHHHhhcc
Q psy3132 442 FTNDISQAWRVGKKLQ 457 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~ 457 (507)
|..+.+. .++++++.
T Consensus 373 ~~~~~~~-~~~~~~l~ 387 (422)
T cd07080 373 APSPAEL-AELADALA 387 (422)
T ss_pred ecChhhH-HHHHHHHH
Confidence 9988877 77887775
|
Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN. |
| >COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-37 Score=297.10 Aligned_cols=386 Identities=16% Similarity=0.202 Sum_probs=311.9
Q ss_pred HHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc------CCChhhh-h-----HhHHHHHHH
Q psy3132 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES------GKPPTES-L-----GEVVYANSF 132 (507)
Q Consensus 65 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------Gk~~~~a-~-----~ev~~~~~~ 132 (507)
.++....++|++|......++.++|-+.|.++++.|+++.++|.++..+|. |.+.... | ..+..+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 457778889999999999999999999999999999999999988876654 4332221 0 345555666
Q ss_pred HHHHHHHHHHhcCccc-cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHH
Q psy3132 133 VDWFSEEARRTYGELV-PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211 (507)
Q Consensus 133 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~ 211 (507)
++..+...++...... .....|.+.+..|.|+||+++| |....+..+...+.+|.+||+||+|.+..+..++..+.+
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvI--YEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~ 160 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVI--YESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVE 160 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEE--EecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHH
Confidence 6666665544322111 1123467888999999999999 888888899999999999999999999999999888877
Q ss_pred HH----HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCC
Q psy3132 212 LA----HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSN 287 (507)
Q Consensus 212 ~l----~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~d 287 (507)
++ .++|+|++.||+|+.+ +...+.+.|.....||.|+-.||...-+.|.+.+. .||+-..-|++.++|+.+
T Consensus 161 ~i~~aL~~~~lP~~aVqli~~~--~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~---vPVi~~~~G~CHiyvd~~ 235 (417)
T COG0014 161 VIQEALEKAGLPADAVQLIEDT--DREEVLELLRLDGYIDLVIPRGGAGLIRRVVENAT---VPVIEHGVGNCHIYVDES 235 (417)
T ss_pred HHHHHHHHcCCCHHHhhhccCC--CHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCc---CCEEecCcceEEEEeccc
Confidence 65 5669999999999964 35677788888889999999999999999998885 788777779999999999
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHH
Q psy3132 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367 (507)
Q Consensus 288 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~ 367 (507)
||+|.|.+-++.++....+ .|.+.+.++||+.+.++|+..|.+.+.+ -
T Consensus 236 ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~-~------------------------------ 283 (417)
T COG0014 236 ADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQE-A------------------------------ 283 (417)
T ss_pred CCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHh-c------------------------------
Confidence 9999999999999999988 7999999999999999999999988765 1
Q ss_pred HHHHCCCeEEeCCCccccCCCceeeceEeec--CCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTN--ITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 368 ~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~--~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
|.++.+..... .++.+ .+....-+..|...+++.|..+++.||||+++|....+|+-+|.|+|
T Consensus 284 -----gvelr~d~~~~----------~~~~~~~~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiTe~ 348 (417)
T COG0014 284 -----GVELRGDAEAL----------ALLPDAVKPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIITED 348 (417)
T ss_pred -----CeEEEcCHHHH----------HhccccCCCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceeeCC
Confidence 22221111100 00111 22333446788899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCC----CchHHHHHhchhceEEEec
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGR----EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~----~~g~~~l~~~t~~k~v~~~ 504 (507)
...+++|.+++++..||||.++.+..+.-||=-.+-|+.. -+||.||+++|..|+|..+
T Consensus 349 ~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~LTs~Kyiv~G 411 (417)
T COG0014 349 YANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEALTSYKYIVRG 411 (417)
T ss_pred HHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhhhcceeEEEeC
Confidence 9999999999999999999999887777776444445443 4899999999999999776
|
|
| >KOG4165|consensus | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-28 Score=231.34 Aligned_cols=381 Identities=19% Similarity=0.185 Sum_probs=298.3
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHcCCChhhh-h-----HhHHHHHHHHH
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIM------TQESGKPPTES-L-----GEVVYANSFVD 134 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~a-~-----~ev~~~~~~l~ 134 (507)
+++..+.||.+.+..+.++.++|.++|.++++.|..+..++..+. ++++|.....- | .-+.....-++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 455668899999999999999999999999999998877666544 34555432221 1 23333444445
Q ss_pred HHHHHHHHhcCccc--cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHH
Q psy3132 135 WFSEEARRTYGELV--PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212 (507)
Q Consensus 135 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~ 212 (507)
..++..+ ..|.+. .....+...+....|+||.++| |....-.+....+.|++.||.+++|....+..+...|.++
T Consensus 82 ~ia~~ed-pvGRVl~~~~ladgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~ 158 (433)
T KOG4165|consen 82 QIAELED-PVGRVLKKTRLADGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKL 158 (433)
T ss_pred HHHhccc-chhhheeeeeccCCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHH
Confidence 4444222 222221 1122455667788899999999 8887778888889999999999999999999998888887
Q ss_pred HHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCC
Q psy3132 213 AHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNA 288 (507)
Q Consensus 213 l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~da 288 (507)
..++ |.|.+.+++|.. .+++.+.|-....||.|+-.||+...+.|....- +||..+-.|.+.++|++||
T Consensus 159 v~~al~~~~~~~~aV~LV~s----REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tk---IPVLGHA~GichvYvd~da 231 (433)
T KOG4165|consen 159 VQEALGTHGGPGKAVQLVTS----REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTK---IPVLGHAEGICHVYVDKDA 231 (433)
T ss_pred HHHHhhhccCchhhhhheec----HHHHHHHhhhhhheeEEecCCcHHHHHHHhhccc---CcccccccceeEEEecccc
Confidence 7766 678899999995 5788898888889999999999999999987764 8999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhcCCCcccCcceechhhh-HHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHH
Q psy3132 289 NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367 (507)
Q Consensus 289 Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~ 367 (507)
|+++|.+-+..++..+.. .|.+.+.+++|++. ...|++.|...+.+
T Consensus 232 d~~kA~riv~DaK~dYPA-aCNAmETLLIh~dl~~~~~~~~l~~~l~~-------------------------------- 278 (433)
T KOG4165|consen 232 DLDKAKRIVRDAKCDYPA-ACNAMETLLIHKDLEQSPFFDDLINMLKE-------------------------------- 278 (433)
T ss_pred CHHHHHHHHhcccCCCch-hhhhHHHHhccHhhhhcchHHHHHHHHHh--------------------------------
Confidence 999999888888887765 79999999999984 45566666544433
Q ss_pred HHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q psy3132 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447 (507)
Q Consensus 368 ~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 447 (507)
+|.++.+|.+... ++.-.+|...-++.|.-.-.+++-.+++.++||+.+|..+.+++-+|.|+|..
T Consensus 279 ----~gVtl~agpkl~~----------~l~~~p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~ 344 (433)
T KOG4165|consen 279 ----EGVTLHAGPKLAA----------LLKFSPPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEA 344 (433)
T ss_pred ----cCeEEecChhHHh----------hcCcCCchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHH
Confidence 4555555543221 11111445566778887888999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCC----chHHHHHhchhceEEEec
Q psy3132 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGRE----GSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~----~g~~~l~~~t~~k~v~~~ 504 (507)
.++.|.+.+++..|++|.++.+..++-||=-.+-|+... +||-|++-.+.+|++..+
T Consensus 345 ~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttkw~lRG 405 (433)
T KOG4165|consen 345 TAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTKWLLRG 405 (433)
T ss_pred HHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeeeeEEec
Confidence 999999999999999999999888888975556665433 899999999999988654
|
|
| >PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.3e-16 Score=163.49 Aligned_cols=348 Identities=15% Similarity=0.118 Sum_probs=229.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHcCCChhhhhHhHHHHHHHHHH--HHHHHHHhcCc--cccCCCCCce
Q psy3132 83 QTTPKERGIVLKRWLKELEGN--KQALAEIMTQESGKPPTESLGEVVYANSFVDW--FSEEARRTYGE--LVPSPVKSKE 156 (507)
Q Consensus 83 ~~~~~~R~~~L~~~a~~l~~~--~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~--~~~~~~~~~~~--~~~~~~~~~~ 156 (507)
.+|.++..++|.++++.+... .....+.+..-+|.+....+. +......++. .....+.-.+. .+....+...
T Consensus 2 ~~~~~~Ii~~l~~~~~~~~~~~~~~r~~~~l~~~~g~~~~~~~~-l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~ 80 (399)
T PF05893_consen 2 DLPVEEIIDFLDRVGKRWLDPDYPRRAIELLPKITGYSPEMVEY-LEALMRWFRRENLERKLERELGNPESLDGWVPRGD 80 (399)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCchHHHHHhhhhhcCCCHHHHHH-HHHHHHhcCHHHHHHHHHHhcCCHhHhhccccccc
Confidence 467778888888888887654 333666777778887766654 4443333311 11111111121 1112223334
Q ss_pred eEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCC----CcEEEEeCCCCC
Q psy3132 157 LLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK----GVLNVVTSSRTN 232 (507)
Q Consensus 157 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~----gvv~~v~g~~~~ 232 (507)
.+..+.|+|++++|.|.|-|+.. ++.++.+|++||..|+|+|...+.++..|.+.|.+. .|. ..+.++..++ .
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~-~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~-~ 157 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVG-FYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPG-G 157 (399)
T ss_pred chhhccCCceEEEEcCCCccchH-HHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecC-C
Confidence 67889999999999999999855 456777888999999999999999999999999887 564 4477775432 2
Q ss_pred chHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccC
Q psy3132 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312 (507)
Q Consensus 233 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 312 (507)
+.++.+.+.+ ..|.++.+||..+.+.+.+... ..++.+....-.+-++|..+++++.+++.++.-.+...+|.|.||
T Consensus 158 d~~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~-~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp 234 (399)
T PF05893_consen 158 DEELEEALSQ--QADAVVAWGGDETIRAIRQPLP-PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSP 234 (399)
T ss_pred chHHHHHHHH--HCCEEEEeCCHHHHHHHHHHcC-CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCC
Confidence 4566677764 5799999999999999988443 334444444566677888888999999999999999999999999
Q ss_pred cceech---hhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHH-----HHHHCCCeEEeCCCccc
Q psy3132 313 NRFLIQ---EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ-----DAISKGAKVILGGGKVT 384 (507)
Q Consensus 313 ~~v~V~---~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~Ga~v~~gg~~~~ 384 (507)
+.|||. +.-.++|.++|.+.+.+ ..---|... .+......+....+ .+...+.++..+..
T Consensus 235 ~~ifv~~g~~~~~~~f~~~L~~~L~~-~~~~~p~~~--------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--- 302 (399)
T PF05893_consen 235 QVIFVETGDGDSVEEFAERLAEALER-AAERYPRGE--------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDD--- 302 (399)
T ss_pred eEEEEECCCcccHHHHHHHHHHHHHH-HHHhCCCcC--------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCC---
Confidence 999999 33468888888777765 221112111 12222222222222 23333444442221
Q ss_pred cCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-cee
Q psy3132 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL-QVG 459 (507)
Q Consensus 385 ~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~~G 459 (507)
.. -||+....+ ......++-++.|+++++.+|++..++....=-|.+++... ....++++.+ ..|
T Consensus 303 --~~----~~V~~~~~~---~~~~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 303 --NS----WTVIVSPEP---PLLPSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred --CC----EEEEECCCc---ccccCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 11 256554332 22234456789999999999999999887432477777644 4566666644 355
|
The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process |
| >KOG2449|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.3e-15 Score=126.47 Aligned_cols=145 Identities=26% Similarity=0.405 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHH-HCCCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAI-SKGAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 322 ~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
+....+.|++..+. +++-+...++ +|. .+..+++.++++.-. ..|..+..-|-. +|+|..||+|. ++
T Consensus 8 aksW~~~lve~ak~-l~v~~g~kp~-tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~ya----~~~f~~~tiLs-vt 75 (157)
T KOG2449|consen 8 AKSWHPTLVEDAKV-LKVNAGEKPQ-TDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGYA----EGNFVGPTILS-VT 75 (157)
T ss_pred hhhhhHHHHHhhhh-eEeccCCCCC-ccc-----hhHHHHHHHHhcCcCccCCceEEeeccc----cCCcccceEEE-ec
Confidence 35667778888888 8888888888 776 677788888887521 123333333332 58999999998 99
Q ss_pred CCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCC
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGV 478 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~ 478 (507)
|+|.++.||+||||+....-++++|+|.++|+.+||....|||.+.+.+++++...++|.+.+|..... .+...|.|-
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~ilk~~sfsg~ 154 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPVILKMFSFSGD 154 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccccccceecccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986542 344445553
|
|
| >PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-10 Score=103.70 Aligned_cols=164 Identities=15% Similarity=0.199 Sum_probs=125.9
Q ss_pred CcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHH
Q psy3132 280 APFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQV 359 (507)
Q Consensus 280 ~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~ 359 (507)
.-+||++|.|++.|+..++.+.-.--| ..+...|+||+++.|+|+++++.+++. + ++. +.+...+
T Consensus 6 ~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~p-l------~~~------va~Hpny 70 (215)
T PF07368_consen 6 QLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKP-L------SPQ------VANHPNY 70 (215)
T ss_pred eEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCcc-C------Chh------hccCcHH
Confidence 348999999999999999998865555 457778999999999999999988765 3 222 2233445
Q ss_pred HHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcC--CCCc
Q psy3132 360 EKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNS--NTGL 437 (507)
Q Consensus 360 ~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~--~~gl 437 (507)
.|-.+.++ .-+++++.++... .-..-.|.++.+.+.+. +.. --.+|+++..|++..||+++.+.- +|+
T Consensus 71 ~rsl~~i~---~l~~~~I~~~~~~---~~~~aSPilV~d~~h~~--fg~-~PTgViTlhtFRt~~Ea~~l~~kE~l~f~- 140 (215)
T PF07368_consen 71 LRSLKKIK---CLNAKTIVADFEN---VPPPASPILVCDFTHSY--FGD-GPTGVITLHTFRTPKEAIELCAKETLPFD- 140 (215)
T ss_pred HHHHHHHH---hcCCeEEEecccC---CCCCCCCEEEcCCCHHH--cCC-CCCeEEEEEccCCHHHHHHHHhcCCCCcc-
Confidence 55555544 4789999884432 12234699998776542 222 234899999999999999999874 555
Q ss_pred EEEEecCCHHHHHHHHhhcceeeEEEcCCCC
Q psy3132 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGII 468 (507)
Q Consensus 438 ~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~ 468 (507)
+.|||++-.+.+.+++.+++...++||+...
T Consensus 141 SVsiW~ekla~~Yel~~~l~~~~f~iNC~~V 171 (215)
T PF07368_consen 141 SVSIWNEKLASAYELAARLPCDTFYINCFNV 171 (215)
T ss_pred eEEEeCcHHHHHHHHHHhCCCCEEEEEeccC
Confidence 9999999999999999999999999998765
|
The function of this family is unknown. |
| >PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.2e-06 Score=99.16 Aligned_cols=97 Identities=16% Similarity=0.171 Sum_probs=78.6
Q ss_pred CCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q psy3132 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTN 232 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~ 232 (507)
-|..+..+..|+|++++|+||| ..++.+++.||++||+||+||++.++. .+. .+|..+.+.+.
T Consensus 1068 TGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~--~Lp~~~~~~~~----- 1130 (1208)
T PRK11905 1068 TGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------ALA--DLPGLVAARID----- 1130 (1208)
T ss_pred CCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HHH--hCccccccccc-----
Confidence 4788999999999999999999 457889999999999999999998652 121 25665555443
Q ss_pred chHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 233 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
++..+..++.|++|.||||+.+.+.|.++.+.+.
T Consensus 1131 ---~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905 1131 ---WTQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred ---cccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence 2346778889999999999999999998888664
|
|
| >PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.039 Score=56.48 Aligned_cols=259 Identities=19% Similarity=0.162 Sum_probs=121.6
Q ss_pred CCceeEEEeecccEEEEEcCC-cccHH-hHHhhHHhHhhcCCeEE--eccCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q psy3132 153 KSKELLMVREPLGVVGLITPW-NFPMA-MITRKVAPALAAGCTCV--IKPAEDTPLTALALAALAHEAQIPKGVLNVVTS 228 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~ALaaGN~Vv--lkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 228 (507)
+|.....++.|+--|++..|. .+|+. +.++.++||-.+|..=| .-|+...-.....+.-..+.+|... +..-
T Consensus 96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~v 171 (412)
T PF00815_consen 96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKV 171 (412)
T ss_dssp TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE-
T ss_pred CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEec
Confidence 466677889999999999993 44543 34567889999997544 4455442223334445566666532 2221
Q ss_pred CCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCc--EEEcCCCCHHHHHHHHHHHHH
Q psy3132 229 SRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP--FIVYSNANLQKAVSGAMAAKF 302 (507)
Q Consensus 229 ~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~--~iV~~daDl~~aa~~i~~~~~ 302 (507)
+|...-.+|. .-|+||+|+=.|..-+...=..-.+.-.+- -+.|.+= +|-+++||.+.++..++.-+=
T Consensus 172 ---GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID---~~AGPSEv~ViAD~~A~p~~vAaDLLaQAE 245 (412)
T PF00815_consen 172 ---GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID---MIAGPSEVLVIADETANPEFVAADLLAQAE 245 (412)
T ss_dssp ----HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES---------EEEEEE-TTS-HHHHHHHHHHHHT
T ss_pred ---ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC---CCCCCCceEEEECCCCCHHHHHHHHHHHhc
Confidence 1444444444 358899999999886543222222111111 1224443 344678999998888876553
Q ss_pred HhcCCCcccCcceechhh--hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCC
Q psy3132 303 RNCGQACVAANRFLIQEQ--VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380 (507)
Q Consensus 303 ~~~GQ~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg 380 (507)
... .+ +.++|..+ ..++..+.+.+.+.. + ... +.++++.+.|
T Consensus 246 Hd~----~a-~~vLvt~s~~la~~V~~~v~~~l~~-l----------------~r~-------~i~~~sl~~g------- 289 (412)
T PF00815_consen 246 HDP----DA-QAVLVTTSEELAEAVEAEVERQLEE-L----------------PRR-------EIAEKSLENG------- 289 (412)
T ss_dssp T-T----T--EEEEEES-HHHHHHHHHHHHHHHTT------------------TTH-------HHHHHHHTT--------
T ss_pred cCC----CC-ceEEEECCHHHHHHHHHHHHHHHHh-C----------------Cch-------HHHHHHHHCC-------
Confidence 332 22 23444433 344444444433333 1 011 1222222211
Q ss_pred CccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-ee
Q psy3132 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ-VG 459 (507)
Q Consensus 381 ~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~G 459 (507)
.++.++|++||++++|..-.= -..|.++|. +++..+++ +|
T Consensus 290 -----------------------------------~ii~~~~l~ea~~~~N~~APE-HLel~~~~~---~~~~~~i~~AG 330 (412)
T PF00815_consen 290 -----------------------------------AIIVVDSLEEAIELANEYAPE-HLELQVEDP---EELLEKIRNAG 330 (412)
T ss_dssp -----------------------------------EEEE-SSHHHHHHHHHHH--S-EEEEESTTH---HHHGGG--S-S
T ss_pred -----------------------------------eEEEECCHHHHHHHHHHhhHH-HHHHHHcCH---HHHHHHhhccC
Confidence 234468899999999985443 467888885 55677876 99
Q ss_pred eEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 460 MVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 460 ~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
.|++..++. .++-+|-+| .+|+.|.-+...|++.-++
T Consensus 331 aiFlG~~tp~a~GDY~aGpNHvLPT~G-----~AR~~sgLsv~~FlK~~s~ 376 (412)
T PF00815_consen 331 AIFLGEYTPEALGDYAAGPNHVLPTGG-----TARFSSGLSVDDFLKRISV 376 (412)
T ss_dssp EEEESTT--HHHHHHTSSS------TT-----GGGT---S-GGGGEEEEEE
T ss_pred hhhcCCCCCHHHhhhccCCCccCCCCc-----cccccCCCcHHHccceeeE
Confidence 999997653 245566554 6777777788888876543
|
In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B. |
| >cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.14 Score=52.19 Aligned_cols=285 Identities=16% Similarity=0.149 Sum_probs=155.1
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCc-ccHH-hHHhhHHhHhhcCCeEE--eccCC
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWN-FPMA-MITRKVAPALAAGCTCV--IKPAE 200 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n-~P~~-~~~~~l~~ALaaGN~Vv--lkps~ 200 (507)
-+..+.+.++.|.....+. .......+|.....++.|+--|++..|.- +|+. +.++..+||-.+|..=| .-|..
T Consensus 56 ai~~A~~nI~~fh~~q~~~--~~~~~~~~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~ 133 (390)
T cd06572 56 AIELAAENIRAFHEAQLPK--DWEVETEPGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPR 133 (390)
T ss_pred HHHHHHHHHHHHHHHhCCC--CeEEEeCCCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcC
Confidence 3445555565554432221 11111225677778899999999999954 5553 34567799999997654 44553
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccc-
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE- 275 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~le- 275 (507)
..-.....+.-..+.+|... +..- +|.....+|. ..|.+|+|+=.|..-+...=..-.+ .+-..
T Consensus 134 ~~g~i~p~iL~aa~~~Gv~e----iy~v---GGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v~g----~V~ID~ 202 (390)
T cd06572 134 KDGKINPAILAAAKLAGVDE----IYKV---GGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLVSG----DVGIDM 202 (390)
T ss_pred CCCCCCHHHHHHHHHcCCcE----Eecc---CCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHhcC----CcCccC
Confidence 21111122222445555432 2221 1444444444 4788999998888765432222121 11111
Q ss_pred cCCCCcE--EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechh--hhHHHHHHHHHHHHHhccccCCCCCCCCCccC
Q psy3132 276 LGGNAPF--IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQE--QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLG 351 (507)
Q Consensus 276 lgG~~~~--iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~g 351 (507)
+.|.+=+ |-+++||.+.++..++.-+=.. -.+ +.+++.. ++.++..+.+.+.+.. +.
T Consensus 203 ~AGPSEvlIiAD~~A~p~~vAaDLLaQAEH~----~~a-~aiLvT~s~~la~~V~~~v~~ql~~-l~------------- 263 (390)
T cd06572 203 PAGPSEVLVIADETANPEFVAADLLSQAEHD----PDS-QAILVTTSEELAEAVEEEVERQLAE-LP------------- 263 (390)
T ss_pred CCCCceEEEEeCCCCCHHHHHHHHHhhhccC----CCC-eEEEEECCHHHHHHHHHHHHHHHHh-CC-------------
Confidence 1244443 4456689999888877644222 222 3344433 3344444444443333 10
Q ss_pred ccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHh
Q psy3132 352 PLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVAN 431 (507)
Q Consensus 352 pl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n 431 (507)
.. +.++++..+. -.++.++|.+|+++++|
T Consensus 264 ---r~-------~~~~~~~~~~-----------------------------------------g~ii~~~~~~eai~~~N 292 (390)
T cd06572 264 ---RR-------EIAAKSLLDY-----------------------------------------GAIILVDDLEEAIELAN 292 (390)
T ss_pred ---cH-------HHHHHHHHhC-----------------------------------------CEEEEECCHHHHHHHHH
Confidence 00 0112211111 11334688999999999
Q ss_pred cCCCCcEEEEecCCHHHHHHHHhhcc-eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 432 NSNTGLAGYFFTNDISQAWRVGKKLQ-VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 432 ~~~~gl~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
..-.= -.-|.++|.. .+..+++ +|.|++..++. .++-+|.+ |..|+.|.-+...|++.-++
T Consensus 293 ~~APE-HLel~~~~~~---~~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~-----G~Ar~~sgL~v~~F~K~~s~ 363 (390)
T cd06572 293 EYAPE-HLELQTEDPE---ELLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTG-----GTARFYSGLSVDDFLKRITV 363 (390)
T ss_pred hhchh-hheeHhcCHH---HHHhhCccceEEeecCCCchhhhccccCCCCccCCC-----cceeecCCCCHHHheeccee
Confidence 86433 3567777764 4667775 99999987653 13445554 46777777788888876443
|
C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway. |
| >PRK12447 histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.13 Score=52.87 Aligned_cols=258 Identities=16% Similarity=0.119 Sum_probs=147.5
Q ss_pred CCceeEEEeecccEEEEEcCC-cccHH-hHHhhHHhHhhcCCeEEe--ccCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q psy3132 153 KSKELLMVREPLGVVGLITPW-NFPMA-MITRKVAPALAAGCTCVI--KPAEDTPLTALALAALAHEAQIPKGVLNVVTS 228 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~ALaaGN~Vvl--kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 228 (507)
+|.....++.|+--|++..|. .+|+. +.++..+||-.+|..=|+ -|+.........|+ ..+.+|... +..-
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~~Gv~e----Iy~v 179 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHLAGADE----IYVL 179 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHHcCCCe----ehhc
Confidence 456667789999999999995 44553 345678999999976544 45432111222233 446665432 2221
Q ss_pred CCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhccccccccccc-CCCCcE--EEcCCCCHHHHHHHHHHHH
Q psy3132 229 SRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL-GGNAPF--IVYSNANLQKAVSGAMAAK 301 (507)
Q Consensus 229 ~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~~--iV~~daDl~~aa~~i~~~~ 301 (507)
+|...-.+|. .-|+||+|+=.|..-+...=..-.+ .+-..+ .|.+=+ |-+++||.+..+..++.-+
T Consensus 180 ---GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 252 (426)
T PRK12447 180 ---GGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFG----RVGIDLFAGPTETLVIADDTADPELVATDLLGQA 252 (426)
T ss_pred ---CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 1444444443 4678999998888765432221121 122221 244444 3355689999888887655
Q ss_pred HHhcCCCcccCcceech--hhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeC
Q psy3132 302 FRNCGQACVAANRFLIQ--EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379 (507)
Q Consensus 302 ~~~~GQ~C~a~~~v~V~--~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 379 (507)
=... .+ +.++|. +++.++..+.+...+.. + .. .+.++++.++.
T Consensus 253 EHd~----~a-~~iLvT~s~~la~~V~~~v~~ql~~-l----------------~r-------~~i~~~sl~~~------ 297 (426)
T PRK12447 253 EHGP----NS-PAVLITTSRKLAEEVLAEIERLLAI-L----------------PT-------ADVASAAWRDY------ 297 (426)
T ss_pred ccCC----CC-ceEEEECCHHHHHHHHHHHHHHHHh-C----------------CH-------HHHHHHHHHhC------
Confidence 3222 22 334443 33444544444444433 1 00 12223333221
Q ss_pred CCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-e
Q psy3132 380 GGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ-V 458 (507)
Q Consensus 380 g~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~ 458 (507)
| .|+.++|++||++++|..-.= -..|.++|. +.+..+++ +
T Consensus 298 --------------------------------g---~ii~v~~l~ea~~~~N~~APE-HLel~~~~~---~~~l~~i~nA 338 (426)
T PRK12447 298 --------------------------------G---EVILCDDLEEMVAEADRYASE-HVQVMTEDP---DWFLENMTNY 338 (426)
T ss_pred --------------------------------C---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCcc
Confidence 0 123368899999999986443 345777776 55677776 9
Q ss_pred eeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 459 GMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 459 G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|.|++..++. .++-+|- +|.+|+.|.-+.+.|.+.-++
T Consensus 339 GaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~Ar~~sgLsv~~FlK~~s~ 385 (426)
T PRK12447 339 GALFLGERTNVAYGDKVIGTNHVLPT-----SGAARYTGGLWVGKFLKTVTY 385 (426)
T ss_pred ceeccCCCCchhhhhcccCCCcccCC-----CcceeecCCCcHHHhccceeE
Confidence 9999976543 1334454 456778777888888876443
|
|
| >PRK13770 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.25 Score=50.58 Aligned_cols=258 Identities=17% Similarity=0.171 Sum_probs=147.3
Q ss_pred CCceeEEEeecccEEEEEcCC-cccHH-hHHhhHHhHhhcCCeEEe--ccCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q psy3132 153 KSKELLMVREPLGVVGLITPW-NFPMA-MITRKVAPALAAGCTCVI--KPAEDTPLTALALAALAHEAQIPKGVLNVVTS 228 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~-n~P~~-~~~~~l~~ALaaGN~Vvl--kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 228 (507)
++.....++.|+--|++..|. .+|+. +.++..+||-.+|..=|+ -|++... ....+.-..+.+|... +..-
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~-i~p~iL~Aa~~~Gv~e----Iy~i 174 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNG-VSQEVLAACYITQVNQ----VFQV 174 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCC-CCHHHHHHHHHcCCCe----eecc
Confidence 455566788999999999995 44543 345678999999986554 4543211 1222233445665432 2221
Q ss_pred CCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccc-cCCCCcE--EEcCCCCHHHHHHHHHHHH
Q psy3132 229 SRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE-LGGNAPF--IVYSNANLQKAVSGAMAAK 301 (507)
Q Consensus 229 ~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~le-lgG~~~~--iV~~daDl~~aa~~i~~~~ 301 (507)
+|...-.+|. .-|+||+|+=-|..-+...=..-.+ .+-.. +.|.+=+ |-+++||.+..+..++.-+
T Consensus 175 ---GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQA 247 (416)
T PRK13770 175 ---GGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYLFG----QVGIDQIAGPTEIALIIDETADLDAIVYDVFAQA 247 (416)
T ss_pred ---CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----CcCcCCCCCCceeEEEecCCCCHHHHHHHHHHHh
Confidence 1444444443 4678999998888765432221121 11111 1244443 4456799999888887655
Q ss_pred HHhcCCCcccCcceec--hhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeC
Q psy3132 302 FRNCGQACVAANRFLI--QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379 (507)
Q Consensus 302 ~~~~GQ~C~a~~~v~V--~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 379 (507)
=... .+ +.++| .+++.++..+.+...+.. +. . .+.++++.++.
T Consensus 248 EHd~----~a-~~iLvT~s~~la~~V~~ev~~ql~~-lp----------------r-------~~i~~~al~~~------ 292 (416)
T PRK13770 248 EHDE----LA-RTYVISEDAQVLKDLESRIAKALPN-VD----------------R-------YDIVSKSIANQ------ 292 (416)
T ss_pred ccCC----CC-cEEEEeCCHHHHHHHHHHHHHHHHh-CC----------------h-------HHHHHHHHHhC------
Confidence 3222 22 33444 334445555555444443 10 1 02223322211
Q ss_pred CCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-e
Q psy3132 380 GGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ-V 458 (507)
Q Consensus 380 g~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~ 458 (507)
-.++-++|+||+++++|..-.= -.-|.++|. +.+..+++ +
T Consensus 293 -----------------------------------g~ii~v~~~eeai~~~N~~APE-HLel~~~~~---~~~l~~i~nA 333 (416)
T PRK13770 293 -----------------------------------HYLIHASNFDEACHVMNTIAPE-HASIQTVNP---QPYIEKVKYV 333 (416)
T ss_pred -----------------------------------CEEEEECCHHHHHHHHHhhChH-hheehhCCH---HHHHhhCCEe
Confidence 1123468899999999986443 245777776 55677776 9
Q ss_pred eeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 459 GMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 459 G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|.|++..++. .++-+|- +|..|+.|.-+...|++.-++
T Consensus 334 GaiFlG~~sp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~s~ 380 (416)
T PRK13770 334 GALFIGHYSPEVIGDYVAGPSHVLPT-----NRTARFTNGLSVNDFLTRNTV 380 (416)
T ss_pred ceeccCCCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHeecceee
Confidence 9999986543 1334554 456777777788888886544
|
|
| >PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.27 Score=50.62 Aligned_cols=258 Identities=16% Similarity=0.167 Sum_probs=146.9
Q ss_pred CCceeEEEeecccEEEEEcCC-cccH-HhHHhhHHhHhhcCCeEE--eccCCCChHHHHHHHHHHHHcCCCCCcEEEEeC
Q psy3132 153 KSKELLMVREPLGVVGLITPW-NFPM-AMITRKVAPALAAGCTCV--IKPAEDTPLTALALAALAHEAQIPKGVLNVVTS 228 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~l~~ALaaGN~Vv--lkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g 228 (507)
+|...-..+.|+--|++..|. .+|+ .+.++..+||-.+|..=| .-|+..-. ....+.-..+.+|... +..-
T Consensus 110 ~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~g~-i~p~vL~AA~~~Gv~e----Iy~v 184 (425)
T PRK00877 110 PGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPPDGE-INPAILAAAALAGVDE----VYKV 184 (425)
T ss_pred CCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCCCCC-CCHHHHHHHHHcCCCe----eecc
Confidence 456666788999999999996 3333 345567899999997644 44553211 2222333456666432 2221
Q ss_pred CCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccc-cCCCCcEEE--cCCCCHHHHHHHHHHHH
Q psy3132 229 SRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE-LGGNAPFIV--YSNANLQKAVSGAMAAK 301 (507)
Q Consensus 229 ~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~le-lgG~~~~iV--~~daDl~~aa~~i~~~~ 301 (507)
+|...-.+|. .-|.||+|+=.|..-+...=..-.+ .+-.. +.|.+=++| +++||.+.++..++.-+
T Consensus 185 ---GGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~AGPSEvlViAD~~Anp~~vAaDLLaQA 257 (425)
T PRK00877 185 ---GGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFG----VVGIDMIAGPSEILVIADETADPDFVAADLLSQA 257 (425)
T ss_pred ---CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcC----CcCcCCCCCCceeEEEeCCCCCHHHHHHHHHHHh
Confidence 1555445553 4678999998888765332211111 11111 134444433 45689999988887655
Q ss_pred HHhcCCCcccCcceechh--hhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeC
Q psy3132 302 FRNCGQACVAANRFLIQE--QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILG 379 (507)
Q Consensus 302 ~~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 379 (507)
=... . .+.++|.. ++.++..+.+.+.+.. +. . .+.++++.++
T Consensus 258 EHd~----~-a~aiLvT~s~~la~~V~~~v~~ql~~-l~----------------r-------~~ia~~sl~~------- 301 (425)
T PRK00877 258 EHDP----D-AQSILVTTSEELAEAVAAEVERQLAT-LP----------------R-------AEIARASLEG------- 301 (425)
T ss_pred ccCC----C-CcEEEEECCHHHHHHHHHHHHHHHHh-CC----------------h-------HHHHHHHHHh-------
Confidence 3222 2 23344433 3344444444444433 10 0 1222333222
Q ss_pred CCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-e
Q psy3132 380 GGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ-V 458 (507)
Q Consensus 380 g~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~ 458 (507)
+| .++.++|+|||++++|..-.= -.-|.++|. +.+..+++ +
T Consensus 302 -------------------------------~g---~iivv~~leeai~~~N~~APE-HLel~~~~p---~~~l~~I~nA 343 (425)
T PRK00877 302 -------------------------------QG---AIILVDDLEEAIELSNAYAPE-HLEIQTEDP---RALLDRIRNA 343 (425)
T ss_pred -------------------------------CC---EEEEECCHHHHHHHHHhhChH-heeehhCCH---HHHHhhcCcc
Confidence 11 123368899999999986443 345777886 45667775 9
Q ss_pred eeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 459 GMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 459 G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|.|++..++. .++-+|- +|..|+.|.-+...|++.-++
T Consensus 344 GaiFlG~~tp~a~GDY~aGpNHvLPT-----~G~AR~~sgLsV~~F~K~~s~ 390 (425)
T PRK00877 344 GAIFLGPYTPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRSSV 390 (425)
T ss_pred ceeccCCCCchhhhhcccCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 9999976543 1334454 557788888889999886544
|
|
| >COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.16 Score=51.81 Aligned_cols=258 Identities=18% Similarity=0.197 Sum_probs=145.2
Q ss_pred CCCceeEEEeecccEEEEEcC---CcccHHhHHhhHHhHhhcCCeE--EeccCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q psy3132 152 VKSKELLMVREPLGVVGLITP---WNFPMAMITRKVAPALAAGCTC--VIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226 (507)
Q Consensus 152 ~~~~~~~~~~~P~Gvv~~i~p---~n~P~~~~~~~l~~ALaaGN~V--vlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v 226 (507)
.+|.....+++|+--|++..| --||- +.++..+||-.+|+.= +.-|.+..- .+..+.-..+.+|+.. +++ +
T Consensus 105 ~~Gv~~g~~~~Pi~~VGlYVPGG~A~ypS-tvLM~avPAkvAGv~~Iv~~tPp~~~g-v~p~iL~AA~~~Gv~e-Iy~-v 180 (425)
T COG0141 105 EPGVVLGQRWRPIERVGLYVPGGKAAYPS-TVLMNAVPAKVAGVEEIVVVTPPPKDG-VNPEILAAARLAGVDE-VYK-V 180 (425)
T ss_pred cCCcEEEEEEEEhhheEEEccCCCcCChH-HHHHhhccHhhcCCceEEEECCCCCCC-CCHHHHHHHHHhCcHH-HHH-c
Confidence 457777888999999999999 45544 3445678999999754 445555422 2223333344444332 111 1
Q ss_pred eCCCCCchHHHHhhhcC----CCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcE--EEcCCCCHHHHHHHHHHH
Q psy3132 227 TSSRTNANSVGKLLCTS----PHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF--IVYSNANLQKAVSGAMAA 300 (507)
Q Consensus 227 ~g~~~~~~~~~~~L~~~----~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~--iV~~daDl~~aa~~i~~~ 300 (507)
| |...-.+|.-. +.||+|.=-|+.-+...=..-.+ ..-+=+. .|.+=+ |-++++|.+.++..++.-
T Consensus 181 -G----GAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g--~V~ID~~-AGPSEvlViAD~ta~p~~vA~DLLsQ 252 (425)
T COG0141 181 -G----GAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG--VVGIDMI-AGPSEVLVIADETANPDFVAADLLSQ 252 (425)
T ss_pred -c----CHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC--CcccCCC-CCCceEEEEeCCCCCHHHHHHHHHHH
Confidence 1 45555555533 78999998888765322111111 1111111 244433 335569999988887765
Q ss_pred HHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHH-HCCCeEEeC
Q psy3132 301 KFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAI-SKGAKVILG 379 (507)
Q Consensus 301 ~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~g 379 (507)
+=.. -.|. .++|..+ ++|.++..+++.+.+. .+ .. . +.+.++. +.|
T Consensus 253 AEHd----~~a~-aiLvT~s--~~la~~v~~~v~~~l~----------~l---~~---~----ei~~~~l~~~g------ 299 (425)
T COG0141 253 AEHD----PDAQ-AILVTDS--EELAEAVEAAVERQLE----------TL---PR---A----EIARKALENYG------ 299 (425)
T ss_pred hhcC----CCce-EEEEeCc--HHHHHHHHHHHHHHHH----------hc---cH---H----HHHHHHHHhCC------
Confidence 5322 2333 3455443 4555555555544110 00 00 1 1222222 112
Q ss_pred CCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-e
Q psy3132 380 GGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ-V 458 (507)
Q Consensus 380 g~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~-~ 458 (507)
.|+-++|++|+++++|..-.= -.-|.++|+. .+..+++ +
T Consensus 300 ------------------------------------~iilv~~l~ea~~~~N~~APE-HLei~~~~p~---~~l~~I~nA 339 (425)
T COG0141 300 ------------------------------------AIILVDDLDEAVEISNEYAPE-HLELQTENPR---ELLGKIRNA 339 (425)
T ss_pred ------------------------------------eEEEECCHHHHHHHHHhhChH-hhhhhhcCHH---HHHHHhccc
Confidence 233468899999999986433 3567777754 5667776 9
Q ss_pred eeEEEcCCCCC---------CCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 459 GMVGINEGIIS---------HTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 459 G~v~iN~~~~~---------~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|.|+++.++.. ++-+|- +|+-|+.|.-++..|.+.-
T Consensus 340 GsIFlG~~sPe~~GDY~aG~NHVLPT-----~g~AR~~s~L~v~dF~K~~ 384 (425)
T COG0141 340 GSIFLGHYSPESLGDYAAGPNHVLPT-----SGTARFSSGLSVYDFLKRS 384 (425)
T ss_pred ceeeecCCCCccccccccCCCccCCC-----CccchhcCCccHHHhhhHH
Confidence 99999986541 334454 4566777777788887653
|
|
| >TIGR00069 hisD histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.31 Score=49.62 Aligned_cols=284 Identities=17% Similarity=0.147 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCC-cccH-HhHHhhHHhHhhcCCeEEe--ccCCC
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPW-NFPM-AMITRKVAPALAAGCTCVI--KPAED 201 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~l~~ALaaGN~Vvl--kps~~ 201 (507)
+..+.+.++.|.....+ ........+|.....++.|+--|++..|. .+|+ .+.++..+||-.+|..=|+ -|+..
T Consensus 53 i~~A~~~I~~fh~~q~~--~~~~~~~~~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~ 130 (393)
T TIGR00069 53 LELAAENIRAFHEAQLP--RSWEVETEPGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGK 130 (393)
T ss_pred HHHHHHHHHHHHHHhCC--CCeEEecCCCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCc
Confidence 44555556555443221 11111123566777889999999999996 3343 3455677899999976544 45432
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhccccccccccc-
Q psy3132 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL- 276 (507)
Q Consensus 202 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel- 276 (507)
.-.....+.-..+.+|... +..- +|...-.+|. .-|+||+|+=.|..-+...=..-.+ .+-..+
T Consensus 131 ~g~i~p~iL~AA~~~Gv~e----Iy~v---GGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v~g----~V~ID~~ 199 (393)
T TIGR00069 131 DGKINPAVLAAAKLAGVDE----VYKV---GGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLVFG----DVGIDMP 199 (393)
T ss_pred CCCCCHHHHHHHHHcCCCe----ehhc---CCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcC----ccCcCCC
Confidence 1012222333456666443 2221 1454444443 4678999998888765432221111 122222
Q ss_pred CCCCcE--EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceech--hhhHHHHHHHHHHHHHhccccCCCCCCCCCccCc
Q psy3132 277 GGNAPF--IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ--EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352 (507)
Q Consensus 277 gG~~~~--iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~--~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gp 352 (507)
.|.+=+ |-+++||.+.++..++.-+=.. -.+ +.++|. +++.++..+.+...+.. +.
T Consensus 200 AGPSEvlViAD~~Anp~~iAaDLLaQAEHd----~~a-~~iLvT~s~~la~~V~~~v~~ql~~-l~-------------- 259 (393)
T TIGR00069 200 AGPSEVLVIADETANPEFVAADLLSQAEHD----PDA-QAILVTTSEELAEAVQEEIERQLAT-LP-------------- 259 (393)
T ss_pred CCCceEEEEeCCCCCHHHHHHHHHHHhccC----CCC-cEEEEECCHHHHHHHHHHHHHHHHh-CC--------------
Confidence 244444 3356789999888887655322 222 334443 33455555555544444 10
Q ss_pred cCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc
Q psy3132 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN 432 (507)
Q Consensus 353 l~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~ 432 (507)
. .+.++++..+.. .++.++|++|+++++|.
T Consensus 260 --r-------~~i~~~al~~~g-----------------------------------------~ii~v~~l~ea~~~~N~ 289 (393)
T TIGR00069 260 --R-------REIARKSLEDNG-----------------------------------------AIILVDDLEEAIEISND 289 (393)
T ss_pred --h-------HHHHHHHHHhCC-----------------------------------------EEEEECCHHHHHHHHHh
Confidence 0 122333332210 12336889999999998
Q ss_pred CCCCcEEEEecCCHHHHHHHHhhcc-eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 433 SNTGLAGYFFTNDISQAWRVGKKLQ-VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 433 ~~~gl~a~v~t~d~~~~~~~~~~l~-~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
.-.= -.-|.++|. +++..+++ +|.|++..++. .++-+|- +|.+|+.|.-+...|+++-++
T Consensus 290 ~APE-HLel~~~~p---~~~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT-----~G~Ar~~sgL~v~~F~K~~s~ 359 (393)
T TIGR00069 290 YAPE-HLELQTKNP---EELLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT-----GGTARFYSGLSVLDFLKRITV 359 (393)
T ss_pred hChH-hheehhCCH---HHHHhhcCccceeccCCCCchhhhhccCCCCcccCC-----CcceeecCCccHHHhccceeE
Confidence 5433 245777775 55677775 99999986553 1334554 456777777888888876544
|
This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein. |
| >PLN02926 histidinol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.45 Score=49.03 Aligned_cols=260 Identities=16% Similarity=0.159 Sum_probs=146.8
Q ss_pred CCceeEEEeecccEEEEEcCC-cccH-HhHHhhHHhHhhcCCeEE--eccCCCC-hHHHHHHHHHHHHcCCCCCcEEEEe
Q psy3132 153 KSKELLMVREPLGVVGLITPW-NFPM-AMITRKVAPALAAGCTCV--IKPAEDT-PLTALALAALAHEAQIPKGVLNVVT 227 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~-n~P~-~~~~~~l~~ALaaGN~Vv--lkps~~~-~~~~~~l~~~l~~aGlP~gvv~~v~ 227 (507)
+|.....++.|+.-|++..|. .+|+ .+.++..+||-.+|..=| .-|+... ......|+ ..+.+|+.. +..
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~~Gv~e----Iy~ 184 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKKAGVTH----ILK 184 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHHcCCCe----eec
Confidence 466667889999999999996 3333 345567899999997644 4455321 11222233 456666443 222
Q ss_pred CCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccc-cCCCCcEEE--cCCCCHHHHHHHHHHH
Q psy3132 228 SSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLE-LGGNAPFIV--YSNANLQKAVSGAMAA 300 (507)
Q Consensus 228 g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~le-lgG~~~~iV--~~daDl~~aa~~i~~~ 300 (507)
- +|...-.+|. .-|++|+|+=.|..-+...=..-.+. ..-+-.. ..|.+=++| +++||.+.++..++.-
T Consensus 185 v---GGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~G~-~~~VgID~~AGPSEvlIiAD~tA~p~~vAaDLLaQ 260 (431)
T PLN02926 185 A---GGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMILQNS-EAMVSIDMPAGPSEVLVIADKTANPVHVAADLLSQ 260 (431)
T ss_pred c---CCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHhhCC-CCccccCCCCCCceeEEEeCCCCCHHHHHHHHHHH
Confidence 1 1555444453 46789999999987654322211111 0001121 124444433 4568999988888765
Q ss_pred HHHhcCCCcccCcceechhh--hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEe
Q psy3132 301 KFRNCGQACVAANRFLIQEQ--VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378 (507)
Q Consensus 301 ~~~~~GQ~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 378 (507)
+=... .+ +.++|..+ +.++..+.+...+.. +. . .+.++++...|
T Consensus 261 AEHdp----~a-~aiLvT~s~~la~~V~~~v~~ql~~-l~----------------r-------~~i~~~sl~~g----- 306 (431)
T PLN02926 261 AEHGP----DS-QVVLVAVGDVDLDAIEEEVEKQCQS-LP----------------R-------GEIASKALGHS----- 306 (431)
T ss_pred hccCC----CC-cEEEEECCHHHHHHHHHHHHHHHHh-CC----------------h-------HHHHHHHHHCC-----
Confidence 53222 23 33444333 344444444444433 10 0 11222222211
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ- 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~- 457 (507)
.|+.++|++|+++++|..-.= -..|.++|. +.+..+++
T Consensus 307 -------------------------------------~iivv~~l~ea~~~~N~~APE-HLei~~~~~---~~~l~~i~n 345 (431)
T PLN02926 307 -------------------------------------FIVVARDMAEAISFSNLYAPE-HLIVNVEDA---ESWLDKIDN 345 (431)
T ss_pred -------------------------------------EEEEECCHHHHHHHHHhhChH-hheehhcCH---HHHHhhcCc
Confidence 234468899999999985433 245777775 45667775
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++..++. .++-+|-| |.+|+.|.-+...|+++-++
T Consensus 346 AGaiFlG~~sp~a~GDY~aGpNHvLPT~-----G~AR~~sgLsv~~FlK~~s~ 393 (431)
T PLN02926 346 AGSVFLGRWTPESVGDYASGTNHVLPTY-----GYARMYGGVSLDSFLKYMTV 393 (431)
T ss_pred cceeccCCCCchhhhccccCcCcccCCC-----cceeecCCCcHHHhcceeeE
Confidence 99999976543 13345544 46777777888888886443
|
|
| >PRK13769 histidinol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.55 Score=47.37 Aligned_cols=268 Identities=14% Similarity=0.074 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEe--ccCCCCh
Q psy3132 126 VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVI--KPAEDTP 203 (507)
Q Consensus 126 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvl--kps~~~~ 203 (507)
+..+.+.++.|.....+. .... ..+|.....++.|+--|++..|.-|| .+.++..+||-.+|..=|+ -|+..
T Consensus 59 i~~a~~~I~~fh~~q~~~-~~~~--~~~Gv~~g~~~~Pi~rvG~YVPa~~p-StvLM~~iPAkvAGV~~Iv~~TPp~~-- 132 (368)
T PRK13769 59 ALEAAKSLEALYSRLKPP-EAVD--FYGGVLRSVFWKPVRRAALYVPARYV-STLVMLAVPARAAGVEEIYVVTPPRG-- 132 (368)
T ss_pred HHHHHHHHHHHHHHhCCC-CeEe--cCCCeEEEEEEeeeeeeEEEeccchH-HHHHHhhccHhhcCCCeEEEeCCCCC--
Confidence 444555566554432221 1111 13566667789999999999995444 4456778999999986554 34422
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccccccccccc-CCCCc-
Q psy3132 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL-GGNAP- 281 (507)
Q Consensus 204 ~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~- 281 (507)
....+.-..+.+|... +..- +|...-.++.-.-++|+|+=.|..-+...=..-.+. +-..+ .|.+=
T Consensus 133 -i~p~vL~aa~~~Gv~e----Iy~v---GGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~g~----V~ID~~AGPSEv 200 (368)
T PRK13769 133 -VTGELLAVAKELGVKG----VLAI---GGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLSQY----VGIDGIEGPTEL 200 (368)
T ss_pred -CCHHHHHHHHHcCCCe----eecc---cCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHhCC----cCCCCcCCCcce
Confidence 2222233456666432 2221 144444455554589999988887654322211221 11111 24333
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHH
Q psy3132 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 282 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
+||-+++|.+.++..++.-+=.. -. .+.++|..+ +++.++..+++.+ .
T Consensus 201 lViAD~a~p~~vAaDLLaQAEH~----~~-a~~iLvT~s--~~la~~V~~~v~~-~------------------------ 248 (368)
T PRK13769 201 VVYAEGVPPEVAVRGALAQLEHG----PT-SFAYLLSTD--AELLKAAEEIYRR-E------------------------ 248 (368)
T ss_pred EEEcCCCCHHHHHHHHHHHhhcC----CC-CcEEEEECC--HHHHHHHHHHHHH-H------------------------
Confidence 45555688888777766544221 22 233444443 3555555544443 0
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+. . . .|. ..|+.++|++|+++++|..-.= -..|
T Consensus 249 ----~~----~-~------------~~~-------------------------~~iivv~~leeai~~~N~~APE-HLel 281 (368)
T PRK13769 249 ----RT----S-S------------MGP-------------------------LEVRKVAGVEEAVRFIDEIAPE-HLEV 281 (368)
T ss_pred ----HH----h-c------------CCC-------------------------CeEEEECCHHHHHHHHHhhChH-heEe
Confidence 00 0 0 000 2467789999999999985433 1233
Q ss_pred ecCCHHHHHHHHhhcc-eeeEEEcCCCCC-------CCCCcccCCCCCCCCCCchHHHHHhchhceE
Q psy3132 442 FTNDISQAWRVGKKLQ-VGMVGINEGIIS-------HTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~-~G~v~iN~~~~~-------~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~ 500 (507)
.+. +.+..+++ +|.|+++.+... ++-+|- +|.+|+.|.-+...|+++-+
T Consensus 282 ~~~-----~~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT-----~G~AR~~sgLsv~~FlK~~t 338 (368)
T PRK13769 282 WGR-----REVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT-----GGTARWRGIITPLTFMKPIG 338 (368)
T ss_pred eCc-----HHHHhhCCccCChhcCCchhhhccccCCCCcCCC-----CcceeccCCCcHHHccccee
Confidence 332 22555775 999999654321 334554 45677777778888887544
|
|
| >PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.026 Score=66.23 Aligned_cols=102 Identities=13% Similarity=0.090 Sum_probs=75.2
Q ss_pred CCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCC
Q psy3132 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTN 232 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~ 232 (507)
-|..+..+..|+|+|+++.+-. ...+.+++.+|++||.+|+..++.. ...+ ++||+.+.+.+.-.
T Consensus 1177 TGE~N~l~l~pRg~vLcl~~~~---~~~~~Ql~Aala~Gn~~v~~~~~~~---~~~~------~~Lp~~v~~~v~~~--- 1241 (1318)
T PRK11809 1177 TGERNTYTLLPRERVLCLADTE---QDALTQLAAVLAVGSQALWPDDALH---RALV------AALPAAVQARIQLA--- 1241 (1318)
T ss_pred CCCcceeeccCCCcEEEeCCCH---HHHHHHHHHHHHhCCEEEEeCCchh---HHHH------HhccHHHHhHhhhc---
Confidence 3678888999999999998733 3578899999999999988644432 2222 45999988876421
Q ss_pred chHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccc
Q psy3132 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLS 273 (507)
Q Consensus 233 ~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~ 273 (507)
.........++.|.|.|.....+.+.++.+++..+++
T Consensus 1242 ----~~~~~~~~~~~avl~~G~~~~l~~~~~~LA~R~GaIv 1278 (1318)
T PRK11809 1242 ----KDWQLADQPFDAVLFHGDSDQLRALCEQVAQRDGPIV 1278 (1318)
T ss_pred ----cccccccCCccEEEEeCCHHHHHHHHHHHhcCCCCeE
Confidence 1222233569999999999999999988887765544
|
|
| >KOG2450|consensus | Back alignment and domain information |
|---|
Probab=84.72 E-value=0.16 Score=52.62 Aligned_cols=110 Identities=16% Similarity=0.299 Sum_probs=82.3
Q ss_pred CHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccE---EeEecCCHHHHHHHHh
Q psy3132 355 NLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVA---VCIKFKTEEESLCVAN 431 (507)
Q Consensus 355 ~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl---~v~~~~~~~eai~~~n 431 (507)
+..++.++...+.+.++++...+...+..+ .|.++.++...++++..++++ .|++.. ......+..+.+.+.+
T Consensus 80 ~~~~R~~~L~~~Adlie~~~~~lA~~E~~d--~GKp~~~a~~~Dl~~~~~~~r--y~ag~ad~~~~~~~~~~~~~~~yt~ 155 (501)
T KOG2450|consen 80 DAAERGRLLRKLADLIEQDADVLAALEVLD--NGKPYPEALVSDLPPAIDCFR--YYAGWADKIHGSTIPTDGEFFAYTR 155 (501)
T ss_pred CHHHHHHHHHHHHHHHHhhhHHHhhhcccc--cCCcchhhhhcCchhhhhHHH--hhccchhhcccccCCCCCceEEEec
Confidence 678888899999999999988888887764 588889998788887776655 344433 2334555677888899
Q ss_pred cCCCCcEEEEecCC---HHHHHHHHhhcceeeEEEcCCCC
Q psy3132 432 NSNTGLAGYFFTND---ISQAWRVGKKLQVGMVGINEGII 468 (507)
Q Consensus 432 ~~~~gl~a~v~t~d---~~~~~~~~~~l~~G~v~iN~~~~ 468 (507)
+.+.|-...|---| .-.+.+++-.|.+|+++||-+..
T Consensus 156 ~eP~GV~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae 195 (501)
T KOG2450|consen 156 REPIGVCGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAE 195 (501)
T ss_pred CCcceeeeEeccCchHHHHHHHhhhhHHhhCcEEEecCCC
Confidence 99999555554444 44567788899999999997654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 507 | ||||
| 2w8n_A | 487 | The Crytal Structure Of The Oxidized Form Of Human | 1e-131 | ||
| 2w8p_A | 487 | The Crystal Structure Of Human C340a Ssadh Length = | 1e-130 | ||
| 3jz4_A | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-126 | ||
| 3jz4_C | 481 | Crystal Structure Of E. Coli Nadp Dependent Enzyme | 1e-126 | ||
| 3ifg_A | 484 | Crystal Structure Of Succinate-Semialdehyde Dehydro | 1e-122 | ||
| 3ek1_A | 504 | Crystal Structure Of Aldehyde Dehydrogenase From Br | 1e-117 | ||
| 3rh9_A | 506 | The Crystal Structure Of Oxidoreductase From Marino | 5e-78 | ||
| 4a0m_A | 496 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 7e-78 | ||
| 3ed6_A | 520 | 1.7 Angstrom Resolution Crystal Structure Of Betain | 1e-76 | ||
| 1bxs_A | 501 | Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad | 8e-70 | ||
| 1bi9_A | 499 | Retinal Dehydrogenase Type Two With Nad Bound Lengt | 3e-69 | ||
| 1o9j_A | 501 | The X-Ray Crystal Structure Of Eta-Crystallin Lengt | 3e-69 | ||
| 2opx_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 5e-69 | ||
| 3ty7_A | 478 | Crystal Structure Of Aldehyde Dehydrogenase Family | 7e-69 | ||
| 2imp_A | 479 | Crystal Structure Of Lactaldehyde Dehydrogenase Fro | 2e-68 | ||
| 2o2p_A | 517 | Crystal Structure Of The C-Terminal Domain Of Rat 1 | 2e-68 | ||
| 2hg2_A | 479 | Structure Of Lactaldehyde Dehydrogenase Length = 47 | 2e-68 | ||
| 3rhm_A | 517 | Crystal Structure Of The E673q Mutant Of C-Terminal | 4e-68 | ||
| 3rhj_A | 517 | Crystal Structure Of The E673a Mutant Of The C-Term | 9e-68 | ||
| 3rhr_A | 517 | Crystal Structure Of The C707a Mutant Of The C-Term | 2e-67 | ||
| 4gnz_A | 517 | Crystal Structure Of The C707s Mutant Of C-terminal | 2e-67 | ||
| 3iwj_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 2 | 3e-67 | ||
| 1wnb_A | 495 | Escherichia Coli Ydcw Gene Product Is A Medium-Chai | 4e-67 | ||
| 4i9b_A | 517 | Structure Of Aminoaldehyde Dehydrogenase 1 From Sol | 8e-67 | ||
| 1a4s_A | 503 | Betaine Aldehyde Dehydrogenase From Cod Liver Lengt | 9e-67 | ||
| 3rhl_A | 517 | Crystal Structure Of The E673aC707A DOUBLE MUTANT O | 1e-66 | ||
| 3r31_A | 517 | Crystal Structure Of Betaine Aldehyde Dehydrogenase | 1e-66 | ||
| 3iwk_A | 503 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1 | 2e-66 | ||
| 1cw3_A | 494 | Human Mitochondrial Aldehyde Dehydrogenase Complexe | 3e-66 | ||
| 4i8q_A | 514 | Structure Of The Aminoaldehyde Dehydrogenase 1 E260 | 4e-66 | ||
| 1o05_A | 500 | Apo Form Of Human Mitochondrial Aldehyde Dehydrogen | 4e-66 | ||
| 4fr8_A | 500 | Crystal Structure Of Human Aldehyde Dehydrogenase-2 | 7e-66 | ||
| 4i8p_A | 520 | Crystal Structure Of Aminoaldehyde Dehydrogenase 1a | 8e-66 | ||
| 3n81_A | 500 | T244a Mutant Of Human Mitochondrial Aldehyde Dehydr | 1e-65 | ||
| 2onn_A | 500 | Arg475gln Mutant Of Human Mitochondrial Aldehyde De | 2e-65 | ||
| 3u4j_A | 528 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 5e-65 | ||
| 2d4e_A | 515 | Crystal Structure Of The Hpcc From Thermus Thermoph | 5e-65 | ||
| 1nzw_A | 500 | Cys302ser Mutant Of Human Mitochondrial Aldehyde De | 6e-65 | ||
| 3n80_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase, Apo For | 7e-65 | ||
| 1zum_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 2e-64 | ||
| 3efv_A | 462 | Crystal Structure Of A Putative Succinate-Semialdeh | 6e-64 | ||
| 1ag8_A | 499 | Aldehyde Dehydrogenase From Bovine Mitochondria Len | 8e-64 | ||
| 3i44_A | 497 | Crystal Structure Of Aldehyde Dehydrogenase From Ba | 1e-63 | ||
| 2wme_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-63 | ||
| 2wox_A | 489 | Betaine Aldehyde Dehydrogenase From Pseudomonas Aer | 3e-63 | ||
| 3inl_A | 500 | Human Mitochondrial Aldehyde Dehydrogenase Asian Va | 3e-63 | ||
| 3pqa_A | 486 | Crystal Structure Of Glyceraldehyde-3-Phosphate Deh | 8e-63 | ||
| 2xdr_A | 489 | Crystallographic Structure Of Betaine Aldehyde Dehy | 2e-62 | ||
| 3k2w_A | 497 | Crystal Structure Of Betaine-Aldehyde Dehydrogenase | 3e-62 | ||
| 3zqa_A | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 3e-62 | ||
| 2wme_C | 490 | Crystallographic Structure Of Betaine Aldehyde Dehy | 5e-62 | ||
| 4dng_A | 485 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 7e-60 | ||
| 3b4w_A | 495 | Crystal Structure Of Mycobacterium Tuberculosis Ald | 9e-60 | ||
| 1euh_A | 475 | Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase | 3e-59 | ||
| 4dal_A | 498 | Crystal Structure Of Putative Aldehyde Dehydrogenas | 6e-59 | ||
| 2id2_A | 475 | Gapn T244s Mutant X-Ray Structure At 2.5 A Length = | 8e-59 | ||
| 2esd_A | 475 | Crystal Structure Of Thioacylenzyme Intermediate Of | 2e-58 | ||
| 1qi1_A | 475 | Ternary Complex Of An Nadp Dependent Aldehyde Dehyd | 4e-58 | ||
| 3r64_A | 508 | Crystal Structure Of A Nad-Dependent Benzaldehyde D | 3e-56 | ||
| 3prl_A | 505 | Crystal Structure Of Nadp-Dependent Glyceraldehyde- | 1e-54 | ||
| 1t90_A | 486 | Crystal Structure Of Methylmalonate Semialdehyde De | 6e-53 | ||
| 3rjl_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 1e-47 | ||
| 2jg7_A | 510 | Crystal Structure Of Seabream Antiquitin And Elucid | 2e-47 | ||
| 3qan_A | 538 | Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy | 2e-47 | ||
| 2j6l_A | 500 | Structure Of Aminoadipate-Semialdehyde Dehydrogenas | 3e-47 | ||
| 1uxv_A | 501 | Structural Basis For Allosteric Regulation And Subs | 9e-46 | ||
| 1uxn_A | 501 | Structural Basis For Allosteric Regulation And Subs | 1e-45 | ||
| 1ky8_A | 501 | Crystal Structure Of The Non-Phosphorylating Glycer | 2e-45 | ||
| 3ros_A | 484 | Crystal Structure Of Nad-Dependent Aldehyde Dehydro | 2e-45 | ||
| 2bhp_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 3e-38 | ||
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate Dehydrogenase Length = 51 | 3e-38 | ||
| 4e4g_A | 521 | Crystal Structure Of Putative Methylmalonate-Semial | 2e-37 | ||
| 2bja_A | 516 | Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd | 4e-37 | ||
| 4h7n_A | 474 | The Structure Of Putative Aldehyde Dehydrogenase Pu | 2e-36 | ||
| 3ju8_A | 490 | Crystal Structure Of Succinylglutamic Semialdehyde | 3e-34 | ||
| 3sza_A | 469 | Crystal Structure Of Human Aldh3a1 - Apo Form Lengt | 1e-30 | ||
| 3haz_A | 1001 | Crystal Structure Of Bifunctional Proline Utilizati | 3e-29 | ||
| 1ad3_A | 452 | Class 3 Aldehyde Dehydrogenase Complex With Nicotin | 6e-29 | ||
| 3lv1_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 1e-27 | ||
| 4f9i_A | 1026 | Crystal Structure Of Proline Utilization A (Puta) F | 1e-26 | ||
| 3lns_A | 457 | Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy | 2e-26 | ||
| 3v9j_A | 563 | Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat | 2e-20 | ||
| 3v9g_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 5e-20 | ||
| 3v9h_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 1e-19 | ||
| 3v9i_A | 566 | Crystal Structure Of Human 1-Pyrroline-5-Carboxylat | 2e-19 | ||
| 3v4c_A | 528 | Crystal Structure Of A Semialdehyde Dehydrogenase F | 9e-18 | ||
| 2y52_A | 534 | Crystal Structure Of E496a Mutant Of The Box Pathwa | 3e-10 | ||
| 2vro_A | 532 | Crystal Structure Of Aldehyde Dehydrogenase From Bu | 3e-10 | ||
| 2y51_A | 534 | Crystal Structure Of E167a Mutant Of The Box Pathwa | 5e-10 | ||
| 2y53_A | 534 | Crystal Structure Of E257q Mutant Of The Box Pathwa | 7e-10 | ||
| 2y5d_A | 534 | Crystal Structure Of C296a Mutant Of The Box Pathwa | 4e-09 | ||
| 1eyy_A | 510 | Crystal Structure Of The Nadp+ Dependent Aldehyde D | 2e-06 |
| >pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487 | Back alignment and structure |
|
| >pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481 | Back alignment and structure |
|
| >pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484 | Back alignment and structure |
|
| >pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504 | Back alignment and structure |
|
| >pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506 | Back alignment and structure |
|
| >pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496 | Back alignment and structure |
|
| >pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520 | Back alignment and structure |
|
| >pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501 | Back alignment and structure |
|
| >pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499 | Back alignment and structure |
|
| >pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501 | Back alignment and structure |
|
| >pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479 | Back alignment and structure |
|
| >pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478 | Back alignment and structure |
|
| >pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479 | Back alignment and structure |
|
| >pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479 | Back alignment and structure |
|
| >pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517 | Back alignment and structure |
|
| >pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517 | Back alignment and structure |
|
| >pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503 | Back alignment and structure |
|
| >pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495 | Back alignment and structure |
|
| >pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517 | Back alignment and structure |
|
| >pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503 | Back alignment and structure |
|
| >pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517 | Back alignment and structure |
|
| >pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517 | Back alignment and structure |
|
| >pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503 | Back alignment and structure |
|
| >pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494 | Back alignment and structure |
|
| >pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514 | Back alignment and structure |
|
| >pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500 | Back alignment and structure |
|
| >pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520 | Back alignment and structure |
|
| >pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528 | Back alignment and structure |
|
| >pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515 | Back alignment and structure |
|
| >pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500 | Back alignment and structure |
|
| >pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500 | Back alignment and structure |
|
| >pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462 | Back alignment and structure |
|
| >pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499 | Back alignment and structure |
|
| >pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497 | Back alignment and structure |
|
| >pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489 | Back alignment and structure |
|
| >pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500 | Back alignment and structure |
|
| >pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486 | Back alignment and structure |
|
| >pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489 | Back alignment and structure |
|
| >pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497 | Back alignment and structure |
|
| >pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490 | Back alignment and structure |
|
| >pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490 | Back alignment and structure |
|
| >pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485 | Back alignment and structure |
|
| >pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495 | Back alignment and structure |
|
| >pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475 | Back alignment and structure |
|
| >pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498 | Back alignment and structure |
|
| >pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475 | Back alignment and structure |
|
| >pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475 | Back alignment and structure |
|
| >pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508 | Back alignment and structure |
|
| >pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505 | Back alignment and structure |
|
| >pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486 | Back alignment and structure |
|
| >pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538 | Back alignment and structure |
|
| >pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510 | Back alignment and structure |
|
| >pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538 | Back alignment and structure |
|
| >pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500 | Back alignment and structure |
|
| >pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501 | Back alignment and structure |
|
| >pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501 | Back alignment and structure |
|
| >pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484 | Back alignment and structure |
|
| >pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516 | Back alignment and structure |
|
| >pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516 | Back alignment and structure |
|
| >pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521 | Back alignment and structure |
|
| >pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516 | Back alignment and structure |
|
| >pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474 | Back alignment and structure |
|
| >pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490 | Back alignment and structure |
|
| >pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469 | Back alignment and structure |
|
| >pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001 | Back alignment and structure |
|
| >pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452 | Back alignment and structure |
|
| >pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457 | Back alignment and structure |
|
| >pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026 | Back alignment and structure |
|
| >pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457 | Back alignment and structure |
|
| >pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563 | Back alignment and structure |
|
| >pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566 | Back alignment and structure |
|
| >pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566 | Back alignment and structure |
|
| >pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566 | Back alignment and structure |
|
| >pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528 | Back alignment and structure |
|
| >pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532 | Back alignment and structure |
|
| >pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534 | Back alignment and structure |
|
| >pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde Dehydrogenase From Vibrio Harveyi. Length = 510 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 507 | |||
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 0.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 0.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 0.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 0.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 0.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 0.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 0.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 0.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 0.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 0.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 0.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 0.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 0.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 0.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 0.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 0.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 0.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 1e-179 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 1e-178 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 1e-178 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 1e-177 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 1e-175 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 1e-175 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 1e-174 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 1e-174 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 1e-174 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 1e-174 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 1e-173 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 1e-172 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 1e-171 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 1e-171 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 1e-169 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 1e-168 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 1e-167 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 1e-161 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 1e-143 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 1e-134 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 1e-130 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 1e-109 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 1e-107 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 1e-106 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 8e-99 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 1e-94 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 3e-84 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 5e-72 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 2e-65 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-08 |
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487 | Back alignment and structure |
|---|
Score = 792 bits (2048), Expect = 0.0
Identities = 249/477 (52%), Positives = 343/477 (71%), Gaps = 2/477 (0%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
T +++ G W+ ++ FPV +PA+ L V D GV + + A+ +A EAF +W + + KER
Sbjct: 13 TDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKER 72
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
+L++W + NK LA I+T ESGKP E+ GE++Y+ F++WFSEEARR YG+++
Sbjct: 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIH 132
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+P K + L++++P+GV +ITPWNFP AMITRKV ALAAGCT V+KPAEDTP +ALAL
Sbjct: 133 TPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALAL 192
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A LA +A IP GV NV+ SR NA VG+ +CT P V+ ISFTGST GKIL H + +
Sbjct: 193 AELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHAANSV 252
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+S+ELGG APFIV+ +AN+ +AV+GAMA+KFRN GQ CV +N+FL+Q + D FV+
Sbjct: 253 KRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAF 312
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ K+ G+ + + GPLIN VEKV+ V DA+SKGA V+ GGK +LG
Sbjct: 313 AEAMKKNLRVGNGFE-EGTTQGPLINEKAVEKVEKQVNDAVSKGATVVT-GGKRHQLGKN 370
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
FF PT+L N+T DMLC EE FGP+A IKF TEEE++ +AN ++ GLAGYF++ D +Q
Sbjct: 371 FFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQI 430
Query: 450 WRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
WRV ++L+VGMVG+NEG+IS E FGGVK+SGLGREGS++G++E+ ++KY+C+G L
Sbjct: 431 WRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYGGL 487
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506 | Back alignment and structure |
|---|
Score = 772 bits (1996), Expect = 0.0
Identities = 189/480 (39%), Positives = 264/480 (55%), Gaps = 7/480 (1%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
YI G W F VYNPA +A VP M EDV A+ + + A + +
Sbjct: 12 LTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIE 71
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
R L+ L+ N++ + I+ E GKP E+ GEV YA F D+ ++
Sbjct: 72 TRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHT 131
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P K + P+GV GLI PWNFP+ MI +K++ ALAAGC VIKPA +TPLT +
Sbjct: 132 IPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMI 191
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
A ++ + +P G++N+V A+ +GK+LC V +SFTGST+VG+ L ++
Sbjct: 192 AFFSVMDKLDLPDGMVNLVMG---KASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDTAE 248
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+K+L+LELGGNAPFIV+ +A+L+ A +A KFR GQ CV ANR + E+V D F +
Sbjct: 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQ 308
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L E GD ND ++GPLIN +KV +QDA+ KGA ++ G
Sbjct: 309 KL-AERVNKMTVGDGM-NDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGD 366
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
FF PT++ + +M CY EE FGP+ F+TEEE + N++ GLA Y FT D
Sbjct: 367 GLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAE 426
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNLE 507
+A RV L+ G VG N G EA FGG+K SG+GREG G+ EF + + + G E
Sbjct: 427 RAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGFAE 486
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481 | Back alignment and structure |
|---|
Score = 769 bits (1989), Expect = 0.0
Identities = 229/477 (48%), Positives = 316/477 (66%), Gaps = 8/477 (1%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
QA INGEW+ ++ + V NPAN + L VP MG ++ + AI +A A W T K
Sbjct: 10 QQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAK 69
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER +L+ W + ++ LA +MT E GKP E+ GE+ YA SF++WF+EE +R YG+
Sbjct: 70 ERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDT 129
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P K L+++++P+GV ITPWNFP AMITRK PALAAGCT V+KPA TP +AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
ALA LA A +P GV NVVT +A +VG L ++P V +SFTGST++G+ L C++
Sbjct: 190 ALAELAIRAGVPAGVFNVVT---GSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAK 246
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
IK++SLELGGNAPFIV+ +A+L KAV GA+A+KFRN GQ CV ANR +Q+ V+D+F E
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L + GD + +GPLI+ V KV+ + DA+ KGA+V+ GGK + G
Sbjct: 307 KL-QQAMSKLHIGDGLD-NGVTIGPLIDEKAVAKVEEHIADALEKGARVVC-GGKAHERG 363
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
FF PTIL ++ + EE FGP+A +FK E + + AN++ GLA YF+ D+S
Sbjct: 364 GNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLS 423
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+ +RVG+ L+ G+VGIN GIIS+ A FGG+K SGLGREGS++G+E++ +IKYMC G
Sbjct: 424 RVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484 | Back alignment and structure |
|---|
Score = 768 bits (1986), Expect = 0.0
Identities = 229/477 (48%), Positives = 315/477 (66%), Gaps = 8/477 (1%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
QAYI GEW S F V++PA E L VP MG + AI +A+ A+ W T K
Sbjct: 13 HQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAK 72
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER +L+RW + N LA I+T E GKP E+ GE+ YA SF++WF+EE +R G+
Sbjct: 73 ERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDT 132
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P+P +K +++V+EP+GV ITPWNFP AMI RKV PALAAGC V+KPAE TP +AL
Sbjct: 133 LPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSAL 192
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
A+A LA A +PKGVL+VV + ++G + ++P V +SFTGST VG++L + +
Sbjct: 193 AMAFLAERAGVPKGVLSVVIG---DPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSAP 249
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+K+L+LELGGNAPFIV+ +A+L AV GA+A+K+RN GQ CV NRF + E+V+D F +
Sbjct: 250 TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFAD 309
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L G ++ LGPLIN A V+KV+S + DA++KGA ++ GGK LG
Sbjct: 310 KL-AAAVSKLKVGRGTE-SGATLGPLINEAAVKKVESHIADALAKGASLMT-GGKRHALG 366
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
FF PT+LT + PDM EE FGP+A +F +EEE + +AN++ GLA Y ++ DI
Sbjct: 367 HGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIG 426
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+ WRV + L+ GMVGIN G+IS+ A FGGVK+SGLGREGS +G++++ IKY+C
Sbjct: 427 RVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497 | Back alignment and structure |
|---|
Score = 767 bits (1983), Expect = 0.0
Identities = 152/483 (31%), Positives = 254/483 (52%), Gaps = 10/483 (2%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+I G++V + S + +P+ + + ++P D + A+ A+ A + W++ T +
Sbjct: 13 KVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTAR 72
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
R +L+ + ++ NK LA ++ E GK + + EV +F+D+ + A G++
Sbjct: 73 TRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDI 132
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+PS + +++ + + P GVV IT WNFP+A+ RK+ PAL G T V+KP ++TPL
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
L +A EA +P GVLNV+ + + VG+ LC SP I+ TGST GK +Y ++
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGT---GSVVGQTLCESPITKMITMTGSTVAGKQIYKTSAE 249
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
+ + LELGG AP +V +A+L KA A+ +F NCGQ C R + V+D+F+
Sbjct: 250 YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMA 309
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT--- 384
+ + K GD +GP N +++ +D IV +AI +GA V GG T
Sbjct: 310 KF-LPLVKGLKVGDPMD-ADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEG 367
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
G ++ PT+L ++ D + EE FGP+ +K + E+++ N+S GL+ Y T
Sbjct: 368 FEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQ 427
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+ + L+VG V IN G+ + G K+SG G E + G+E++ + K +
Sbjct: 428 SFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTVYIN 487
Query: 505 NLE 507
E
Sbjct: 488 EAE 490
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504 | Back alignment and structure |
|---|
Score = 764 bits (1976), Expect = 0.0
Identities = 228/477 (47%), Positives = 314/477 (65%), Gaps = 10/477 (2%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+Q +NG W+ V NPA+ + VP + V ++ AI ++ +A W+ T K
Sbjct: 33 SQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAK 92
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER +L++W + N +A IMT E GKP E+ GEV+YA SF++WF+EEA+R YG+
Sbjct: 93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDT 152
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+P+P + L ++R+P+GV ITPWNFP AMITRK APALAAGCT +++PA+ TPLTAL
Sbjct: 153 IPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTAL 212
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
AL LA +A IP GVL +VT A +G L ++ V +SFTGST+VG++L + C+
Sbjct: 213 ALGVLAEKAGIPAGVLQIVTG---KAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCAP 269
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
IKR+SLELGGNAPFIV+ +A+L AV GAM +K+RN GQ CV ANR +Q V+D+F E
Sbjct: 270 TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAE 329
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L K G+ ++ +GP+I + KV + ++DA+SKGAK+I GG +LG
Sbjct: 330 KL-AAKVKELKVGNGTE-PGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGG---KELG 384
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
FF P ILT +T DML EE FGP+A F TEEE + AN++ GLA YF+T + S
Sbjct: 385 GLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFS 444
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+A RV + L+ GMVG N G+IS+ A FGGVK+SGLGREGS++G+EE+ + KY+C
Sbjct: 445 RAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSA 501
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479 | Back alignment and structure |
|---|
Score = 753 bits (1947), Expect = 0.0
Identities = 155/475 (32%), Positives = 258/475 (54%), Gaps = 7/475 (1%)
Query: 30 TQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
YI+G++V V NPA + ++ +PD ED + AI +A+ A +W
Sbjct: 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAI 66
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGEL 147
ER L++ + ++ ++ +E GK + EV + ++D+ +E ARR GE+
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEI 126
Query: 148 VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
+ S + +L+ + LGV I PWNFP +I RK+APAL G T VIKP+E TP A+
Sbjct: 127 IQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAI 186
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
A A + E +P+GV N+V +VG+ L +P VA +S TGS G+ + + ++
Sbjct: 187 AFAKIVDEIGLPRGVFNLVLGR---GETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
I ++ LELGG AP IV +A+L+ AV + ++ N GQ C A R +Q+ ++DQFV
Sbjct: 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVN 303
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L + ++ G+ ++ + +GPLIN A +E+V+ V A+ +GA+V GGK +
Sbjct: 304 RLGEAM-QAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAF-GGKAVEGK 361
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
++ PT+L ++ +M EE FGPV + F T E+++ +AN+S+ GL +T +++
Sbjct: 362 GYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLN 421
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
A + K L+ G IN + G ++SG+G +HG+ E+ Q + +
Sbjct: 422 VAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVY 476
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475 | Back alignment and structure |
|---|
Score = 713 bits (1844), Expect = 0.0
Identities = 152/481 (31%), Positives = 239/481 (49%), Gaps = 18/481 (3%)
Query: 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKER 89
+ Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 5 YKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIER 64
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP 149
L + L +K+ + I+++E K ++ EVV +++ +EE R GE++
Sbjct: 65 AAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLE 124
Query: 150 -----SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG KP +
Sbjct: 125 GGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSI 184
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
+ L LA EA +P GV N +T + +G + V I+FTGST +G+ +
Sbjct: 185 SGLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
G++ + LELGG IV +A+L+ +A F GQ C A R L+ E V D+
Sbjct: 242 A--GMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADE 299
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
VE + E + G+ D ++ PLI+ + V+ ++ DA KGA +
Sbjct: 300 LVEKI-REKVLALTIGN--PEDDADITPLIDTKSADYVEGLINDANDKGATALTEI---- 352
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
K P + +T DM EE FGPV I+ + EE++ ++N S GL FTN
Sbjct: 353 KREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTN 412
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLGREGSRHGMEEFTQIKYMCF 503
D +A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 413 DFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472
Query: 504 G 504
Sbjct: 473 D 473
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485 | Back alignment and structure |
|---|
Score = 709 bits (1833), Expect = 0.0
Identities = 148/484 (30%), Positives = 255/484 (52%), Gaps = 14/484 (2%)
Query: 27 STYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
T +++ING+W S + + NP + + + ++ A A++A ++W+++
Sbjct: 4 ETLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKS 63
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
T ++R VL++ L N+ + ++ +E+G +S E+ + +D
Sbjct: 64 TTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELG 123
Query: 145 G-ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
G + VPS ++ K + R PLGV+ I+P+NFPM + R +APA+A G + V KP T
Sbjct: 124 GVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTA 183
Query: 204 LTALALAA-LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
++ + A A +P GVLNV+ T+ +G + T+P ISFTGST VG+ +
Sbjct: 184 ISGGTIIAKAFEHAGLPAGVLNVML---TDVKEIGDGMLTNPIPRLISFTGSTAVGRHIG 240
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ KR++LELGGN PF V S+A++ +AV A+ KF + GQ C+ NR ++ + V+
Sbjct: 241 EIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVY 300
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+FVE K GD + K +GPLIN Q+EK I++ A + G ++ + G
Sbjct: 301 DEFVEKF-TARVKQLPYGDQTD-PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEG-- 356
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
K P + + E+F P+A IK +++E++ +AN++ GL+ F
Sbjct: 357 --KRVGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVF 414
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHT-EAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
T+D+ + + ++ GM +N+ ++ + AFGG K SG+GR G+ +EEFT K++
Sbjct: 415 TSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWI 474
Query: 502 CFGN 505
Sbjct: 475 SIQK 478
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505 | Back alignment and structure |
|---|
Score = 709 bits (1832), Expect = 0.0
Identities = 153/497 (30%), Positives = 236/497 (47%), Gaps = 23/497 (4%)
Query: 16 MHMKYLQKLCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMS 73
M M + NGEWV S ++ + PA+ L +P + E+V AI
Sbjct: 1 MVMALQTEQ---FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQG 57
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFV 133
AK+A + W ER +L W LE K+ + E++ E KP ++GEV +
Sbjct: 58 AKDAQKIWKIRPIHERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIGEVSRTADII 117
Query: 134 DWFSEEARRTYGELVPSP-----VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188
++EA R GE + K L+ REPLGVV I+P+N+P+ + K+APAL
Sbjct: 118 RHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPAL 177
Query: 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAG 248
G T V KPA L+ + + +A P+G++ VVT + +G L P +
Sbjct: 178 VTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGR---GSVIGDHLVEHPGIDM 234
Query: 249 ISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQA 308
I+FTG T G+ + + + LELGG P IV +A+L+ S ++ F GQ
Sbjct: 235 ITFTGGTTTGERISEKA--KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQR 292
Query: 309 CVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQD 368
C A R +Q+ V DQ V + E+ + G D ++ P+I+ + ++ D
Sbjct: 293 CTAIKRVFVQDSVADQLVANI-KELVEQLTVGS--PEDDADITPVIDEKSAAFIQGLIDD 349
Query: 369 AISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428
A+ GA ++ G K +PT+L ++TP M EE FGPV I+ K E++
Sbjct: 350 ALENGATLLSGN----KRQGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDANEAIS 405
Query: 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLGREG 487
++N S+ GL FT D +A +GK L+VG V IN + F GVK+SGLG +G
Sbjct: 406 LSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQG 465
Query: 488 SRHGMEEFTQIKYMCFG 504
+ + T+ +
Sbjct: 466 IKPSLLSMTRERVTVLN 482
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486 | Back alignment and structure |
|---|
Score = 696 bits (1798), Expect = 0.0
Identities = 159/480 (33%), Positives = 260/480 (54%), Gaps = 21/480 (4%)
Query: 33 YINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIV 92
+I+G+W+ + + V NP + E + +P + E+ + AI +A++ E +R +
Sbjct: 3 FIDGKWI-NREDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNI 61
Query: 93 LKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV 152
L K+++ K+ LA+I+ ++GKP ++ EV + + + E++PS
Sbjct: 62 LMNIAKQIKEKKEELAKILAIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPSD- 120
Query: 153 KSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212
+ + REP+G+VG ITP+NFP+ + K+APA+A G V P+ PL + LA +
Sbjct: 121 -DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKI 179
Query: 213 AHEAQ----IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
A +P GV N++T + VG + + V ISFTGS++VG+++ G
Sbjct: 180 IENALKKYNVPLGVYNLLTGA---GEVVGDEIVVNEKVNMISFTGSSKVGELITKKA--G 234
Query: 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEM 328
K+++LELGG P IV +A+L KAV+ + F GQ C++ L+ E + D+F+EM
Sbjct: 235 FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEM 294
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
V K G+ ++K ++GPLI++ E V+ +V+ AI +G K++LGG K
Sbjct: 295 F-VNKAKVLNVGNPL-DEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGG----KRDK 348
Query: 389 KFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQ 448
F PTIL + D + E F PV I+ EEE + +AN++ GL FTNDI++
Sbjct: 349 ALFYPTIL-EVDRDNILCKTETFAPVIPIIRT-NEEEMIDIANSTEYGLHSAIFTNDINK 406
Query: 449 AWRVGKKLQVGMVGINE-GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNLE 507
+ + + L+ G V IN+ + FGGVK+SGLGREG ++ MEE + IK + E
Sbjct: 407 SLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISKAE 466
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501 | Back alignment and structure |
|---|
Score = 696 bits (1798), Expect = 0.0
Identities = 138/503 (27%), Positives = 235/503 (46%), Gaps = 21/503 (4%)
Query: 11 VTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYA 70
+ + +K + Y +Y+ GEW S ++ V +P + +A V E+V+
Sbjct: 1 MRAGLLEGVIKEKGGVPVY-PSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERT 59
Query: 71 IMSAKEAF-EQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYA 129
+ + ER VL++ +E N AE++ +GKP + ++GEV A
Sbjct: 60 LDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAA 119
Query: 130 NSFVDWFSEEARRTYGELVPSPV----KSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185
+ + ++ G+ +P E L+ REPLGVV ITP+N+P+ K+
Sbjct: 120 VDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKIT 179
Query: 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPH 245
+ G V+KP+ PL A +A P + ++ + +
Sbjct: 180 YSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG----KEAEKIVADDR 235
Query: 246 VAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNC 305
VA +SFTGST+VG+ + G+K+ +ELGG P IV +A+L A +
Sbjct: 236 VAAVSFTGSTEVGERVVKVG--GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYA 293
Query: 306 GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365
GQ C A L + V+ + VE + + S GD + ++GPLI+ + V+++ +
Sbjct: 294 GQRCDAIKLVLAERPVYGKLVEEV-AKRLSSLRVGDPR-DPTVDVGPLISPSAVDEMMAA 351
Query: 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTIL---TNITPDMLCYTEEVFGPVAVCIKFKT 422
++DA+ KG +V+ GG +LG + PT + + DM+ Y EVF PVA+ ++ K
Sbjct: 352 IEDAVEKGGRVLAGG---RRLGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEVKD 408
Query: 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKES 481
++++ +AN GL F D+ + R + L+VG + IN+ FGG K+S
Sbjct: 409 LDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKS 468
Query: 482 GLGREGSRHGMEEFTQIKYMCFG 504
G+ REG + +E T K + F
Sbjct: 469 GVFREGIGYAVEAVTAYKTIVFN 491
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508 | Back alignment and structure |
|---|
Score = 674 bits (1742), Expect = 0.0
Identities = 159/480 (33%), Positives = 256/480 (53%), Gaps = 15/480 (3%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTP 86
T+ I G+WV +S + NP +D +A+ + DV A +AK+A +W+ T
Sbjct: 12 ATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPA 71
Query: 87 KERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE 146
ER ++ R + LE +++ + E + +ESG +++ E+ A + + R +G
Sbjct: 72 AERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHGR 131
Query: 147 LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
+ PS KE + R GVVG+I+PWNFP+ + R VAPALA G VIKPA DTP+T
Sbjct: 132 ISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTG 191
Query: 207 LALAA-LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
+ A + EA +P GV++ V + + +G T ISFTGST VG+ +
Sbjct: 192 GVIPARIFEEAGVPAGVISTVAGA---GSEIGDHFVTHAVPKLISFTGSTPVGRRVGELA 248
Query: 266 SQG--IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFD 323
G +K ++LELGGNAPF+V ++A++ A A F + GQ C++ NR ++ V D
Sbjct: 249 INGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHD 308
Query: 324 QFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383
+F+E VE K+ GD S + +GP+IN +Q+ + ++ A +GA V + G
Sbjct: 309 EFLEKF-VEAVKNIPTGDPS-AEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEG--- 363
Query: 384 TKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT 443
+ + P + +++T DM EE+FGP+ +K E + +AN S+ GL+ ++
Sbjct: 364 -PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWS 422
Query: 444 NDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
DI +A + ++ GMV IN+ ++ FGG K SGLGR +EEFT +++
Sbjct: 423 KDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRWIG 482
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490 | Back alignment and structure |
|---|
Score = 641 bits (1656), Expect = 0.0
Identities = 128/471 (27%), Positives = 217/471 (46%), Gaps = 12/471 (2%)
Query: 30 TQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+ YI G+W+ + +P + V A+ +A+EAF W++ ++
Sbjct: 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQ 65
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R +L+R+ L+ LA ++ +E+GKP ES EV + V + R GE
Sbjct: 66 RIELLERFAATLKSRADELARVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGE-K 124
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
P+ ++ +P GVV + P+NFP + + PAL AG V KP+E TP A
Sbjct: 125 SGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAEL 184
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS-Q 267
+A +P GVLN+V R G L + G+ FTGS++ G +L+S Q
Sbjct: 185 TLKAWIQAGLPAGVLNLVQGGRE----TGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF-DQFV 326
K L+LE+GGN P +V A+L AV + + F + GQ C A R L+ + + D +
Sbjct: 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALL 300
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKL 386
L V ++ + G + +G +I+L+ E + + I KGA+ +L +
Sbjct: 301 ARL-VAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPI-D 358
Query: 387 GSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDI 446
G+ P IL +++ EE FGP+ I++ ++ AN + GLA ++
Sbjct: 359 GAALLTPGIL-DVSAVAERPDEEFFGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSR 417
Query: 447 SQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLGREGSRHGMEEFT 496
+ + + + G+V N+ + +A FGG+ SG R + + +
Sbjct: 418 ERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNHRPSAYYAADYCA 468
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500 | Back alignment and structure |
|---|
Score = 638 bits (1647), Expect = 0.0
Identities = 140/501 (27%), Positives = 219/501 (43%), Gaps = 16/501 (3%)
Query: 10 SVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQY 69
++ + Q +L++L L + NG W + Y PAN+E +A V V D +
Sbjct: 4 TLLINQPQYAWLKELGLREENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEE 63
Query: 70 AIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYA 129
+ A+EA++ W+ +RG ++++ L Q L +++ E GK E +GEV
Sbjct: 64 TVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVGEVQEY 123
Query: 130 NSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALA 189
D+ +R G ++PS L+ P+G+VG+IT +NFP+A+ A A+
Sbjct: 124 VDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMI 183
Query: 190 AGCTCVIKPAEDTPLTALALAALAHEAQ----IPKGVLNVVTSSRTNANSVGKLLCTSPH 245
G C+ K A T L ++A+ + + +P + ++ +G +
Sbjct: 184 CGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGAD----IGTAMAKDER 239
Query: 246 VAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNC 305
V +SFTGSTQVGK + + R LELGGN I + +A+L V A+ A
Sbjct: 240 VNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTA 299
Query: 306 GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365
GQ C A R I E + D+ V L + G+ GPL V
Sbjct: 300 GQRCTTARRLFIHESIHDEVVNRL-KKAYAQIRVGNPWD-PNVLYGPLHTKQAVSMFLGA 357
Query: 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425
V++A +G V + GGKV + PTI+T + D E F P+ KF+ EEE
Sbjct: 358 VEEAKKEGGTV-VYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNEEE 416
Query: 426 SLCVANNSNTGLAGYFFTNDISQA--WRVGKKLQVGMVGINEGIISHTE--AAFGGVKES 481
N GL+ FT D+ + W K G+V +N E AFGG K +
Sbjct: 417 VFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSG-AEIGGAFGGEKHT 475
Query: 482 GLGREGSRHGMEEFTQIKYMC 502
G GRE +++ +
Sbjct: 476 GGGRESGSDAWKQYMRRSTCT 496
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462 | Back alignment and structure |
|---|
Score = 614 bits (1587), Expect = 0.0
Identities = 145/466 (31%), Positives = 255/466 (54%), Gaps = 8/466 (1%)
Query: 41 SSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKEL 100
++ + NPA + LA +P +++++A+ A F++W T+ +R L+ + L
Sbjct: 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQAL 64
Query: 101 EGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160
+ + +A+ +T+E GKP ++ EV + + DW++E P+ V++++ ++
Sbjct: 65 RAHAEEMAQCITREMGKPIKQARAEVTKSAALCDWYAEHGPAMLNP-EPTLVENQQAVIE 123
Query: 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPK 220
PLGV+ I PWNFP+ + R P L AG + ++K A + A +A + EA P
Sbjct: 124 YRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPA 183
Query: 221 GVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280
GV V ++ V ++ P +A ++ TGS + G + + +K+ LELGG+
Sbjct: 184 GVYGWVNAN---NEGVSQM-INDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSD 239
Query: 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340
PFIV ++A+L+ AV A+A +++N GQ C AA RF+++E + F + V + G
Sbjct: 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRF-VAAAAALKMG 298
Query: 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400
D ++ +LGP+ +++ VQ ++++GA+++LGG K+ G+ ++A T+L ++T
Sbjct: 299 DPL-VEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGN-YYAATVLADVT 356
Query: 401 PDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGM 460
PDM + +E+FGPVA K +L +AN+S GL+ FT D + A + +L+ G
Sbjct: 357 PDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGG 416
Query: 461 VGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506
V IN S AFGGVK+SG GRE S G+ EF ++ + +
Sbjct: 417 VFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484 | Back alignment and structure |
|---|
Score = 607 bits (1568), Expect = 0.0
Identities = 127/457 (27%), Positives = 219/457 (47%), Gaps = 8/457 (1%)
Query: 44 KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGN 103
K+ NP +E A + + + AI A +++W P R +L L+ +
Sbjct: 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEH 64
Query: 104 KQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREP 163
+ LA++MT E GK +ES EV S +++++ +++
Sbjct: 65 EDELAKMMTLEMGKLLSESKEEVELCVSICNYYADHGPEMLKP-TKLNSDLGNAYYLKQS 123
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
GV+ PWNFP+ + R AP G ++K A + P +A A + A P+G L
Sbjct: 124 TGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSL 183
Query: 224 NVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283
+ S + + + P + G++ TGS + G + + +K+ ++ELGGN FI
Sbjct: 184 INLYPS---YDQLADI-IADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFI 239
Query: 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343
V +A+ Q + A+ N GQ C ++ R ++++ +D+ + L + + GD
Sbjct: 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHEL-KNVFSNLKAGDPL 298
Query: 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDM 403
L P+ + EK+++ V++AI GAKV ++ G+ FF PTILT+I D
Sbjct: 299 -EADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGA-FFRPTILTDIAKDN 356
Query: 404 LCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGI 463
+ +EVFGP+A + + ++ +AN+S+ GL +DI +A +V +++ GM I
Sbjct: 357 PVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVI 416
Query: 464 NEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500
N I+ E FGG+K+SG GRE S G+ F
Sbjct: 417 NGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHL 453
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 512 bits (1320), Expect = e-179
Identities = 162/479 (33%), Positives = 276/479 (57%), Gaps = 10/479 (2%)
Query: 26 LSTYTQAYINGEWVHSS--KKFPVYNPAND-EHLADVPDMGVEDVQYAIMSAKEAFEQ-- 80
+ + Q ++G+ V ++ +P + E + P+ +DV+ A+ +A++AF+
Sbjct: 19 IKSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGP 78
Query: 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA 140
W + + ER ++ + + ++ LA I + E GKP ++ GE+ + + + +A
Sbjct: 79 WPRMSGAERSRLMFKVADLILARQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQA 138
Query: 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
R G+ + + L++REP+GVVG+ITPWNFP + + +V A+ +GCT V+KP+E
Sbjct: 139 RALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSE 198
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
T T++ LA LA EA IP GV NVVT + G++L P+V ++FTGS +VG
Sbjct: 199 FTSGTSIRLAELAREAGIPDGVFNVVTGY---GDPAGQVLAEDPNVDMVAFTGSVRVGTK 255
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
L ++ +KR+ LELGG P IV+++A+L A G + N GQ C++ +R L+QE
Sbjct: 256 LGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEG 315
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+ D +E L ++I++ GD N++ +G +I+ A EKV S V I+ GA+++LGG
Sbjct: 316 IRDALMERL-LDISRKVAFGD-PLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGG 373
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
++ + ++APT+ +TPDM EE+FGPV + FKT +E++ +AN + GL+
Sbjct: 374 ERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSAS 433
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
++ ++ A + ++++ G IN I E GG K+SGLGRE R+G +E++Q K
Sbjct: 434 VWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFK 492
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495 | Back alignment and structure |
|---|
Score = 509 bits (1313), Expect = e-178
Identities = 157/480 (32%), Positives = 253/480 (52%), Gaps = 14/480 (2%)
Query: 26 LSTYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--W 81
+ Y + +I G+W +S V PA E++ VP DV A+ +A+ AF+ W
Sbjct: 5 ATEYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPW 64
Query: 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEA 140
T P ER V+ +K L K +++ E+G+PPT + + +++F+ A
Sbjct: 65 PSTPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAA 124
Query: 141 RRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200
+ + + ++ REP+GVVG I WN P+ + K+APAL AGCT V+KPA
Sbjct: 125 DKVTWTETRTGSYGQSIV-SREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAA 183
Query: 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260
+TPLTA ALA + E +P+GVL+VV G+ L ++P + +FTGS+ VG+
Sbjct: 184 ETPLTANALAEVFAEVGLPEGVLSVVPGGIE----TGQALTSNPDIDMFTFTGSSAVGRE 239
Query: 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320
+ ++ +K +LELGG + I+ + +L A+ + + N GQ CV R L
Sbjct: 240 VGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRS 299
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
+D+ V + + G S + +GPLI+ Q +V+ + I +GA+++ GG
Sbjct: 300 RYDEIVAAV-TNFVTALPVGPPS-DPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGG 357
Query: 381 GKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439
G+ L + FF PT+ ++ M EE+FGPV I + TEE+++ +AN+S GLAG
Sbjct: 358 GRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAG 417
Query: 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+T D+ + ++ ++++ G GIN + FGG K SG+GRE G+E FTQ K
Sbjct: 418 SVWTTDVPKGIKISQQIRTGTYGINWYAFDPG-SPFGGYKNSGIGRENGPEGVEHFTQQK 476
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478 | Back alignment and structure |
|---|
Score = 507 bits (1308), Expect = e-178
Identities = 159/477 (33%), Positives = 242/477 (50%), Gaps = 16/477 (3%)
Query: 28 TYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTT 85
YT+ YINGEWV +S++ V NPA +E + V DV A+ +A + + ++ T+
Sbjct: 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTS 65
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTY 144
KER +L + +KE E K + + +T E G P + S + +
Sbjct: 66 VKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYE 125
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
E L+V+E +GV GLITPWNFP + K+A A AAG V+KP+E+TP
Sbjct: 126 FEERRGDD-----LVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
A+ LA + + +PKGV N+V VG L P V +SFTGS G +
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGD---GAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEK 237
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
++ K++SLELGG +P+IV + ++++A N GQ C A R L+ ++ D
Sbjct: 238 AAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDA 297
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
F+ LK E G+ D +GP+I+ Q ++V + + I +GA++ GG
Sbjct: 298 FLAELK-EQFSQVRVGNPR-EDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKP 355
Query: 385 KLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
+ K F PTI N+ M EE+FGPV I + +E++ +AN++ GLAGY
Sbjct: 356 EGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVI 415
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
D +V + ++ G V IN + FGG K+SGLGRE +G+EEF ++K
Sbjct: 416 GKDKETLHKVARSIEAGTVEIN-EAGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVK 471
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520 | Back alignment and structure |
|---|
Score = 506 bits (1306), Expect = e-177
Identities = 169/484 (34%), Positives = 278/484 (57%), Gaps = 12/484 (2%)
Query: 23 KLCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ 80
+L + YI+GEWV S+ + NP N E + V + ED + AI++A+ AFE
Sbjct: 26 ELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFES 85
Query: 81 --WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSE 138
WSQ T + RG ++ +++ +++ALA + T ++GK ES ++ ++ +F+
Sbjct: 86 GEWSQETAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDIHNVFMYFAG 145
Query: 139 EARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKP 198
A + GE++ SP+ E +V+EP+GVV ITPWN+P+ + K+APALA GC+ V+KP
Sbjct: 146 LADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKP 205
Query: 199 AEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258
+E TPLT + + L E PKG +N++ + + VG ++ V +SFTG + G
Sbjct: 206 SEITPLTTIRVFELMEEVGFPKGTINLILGA---GSEVGDVMSGHKEVDLVSFTGGIETG 262
Query: 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
K + + + + ++LELGG P I++ +A+ + AV A+ + + GQ C A +R L+Q
Sbjct: 263 KHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQ 322
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
+ D+F + L ++ K G+ + +GP+I+ K++S + A ++GA + +
Sbjct: 323 NSIKDKFEQAL-IDRVKKIKLGN-GFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAV 380
Query: 379 GGGKVTKLGSK---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNT 435
GG + + K FF PT++TN M EEVFGPV F+TE+E++ +AN+S
Sbjct: 381 GGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIY 440
Query: 436 GLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
GLAG F+ DI +A RV KL++G V IN+ +A +GG K+SG+GRE + G+EE+
Sbjct: 441 GLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEY 500
Query: 496 TQIK 499
K
Sbjct: 501 LVSK 504
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503 | Back alignment and structure |
|---|
Score = 502 bits (1296), Expect = e-175
Identities = 169/482 (35%), Positives = 264/482 (54%), Gaps = 16/482 (3%)
Query: 29 YTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-----W 81
Q +ING+W K+ PV NPA + D+P EDV A+ +AK A + W
Sbjct: 7 TRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADW 66
Query: 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR 141
+ + R L+ ++ K LA++ + + GKP E+ ++ +++++ A
Sbjct: 67 ATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAE 126
Query: 142 RTYGEL---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKP 198
+ V P+ + + ++REP+GVVGLITPWN+PM M T KVAPALAAGC ++KP
Sbjct: 127 KLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKP 186
Query: 199 AEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258
+E LT L L + E +P GVLN++T G L T P V ++FTGS+ G
Sbjct: 187 SELASLTCLELGEICKEVGLPPGVLNILTGL---GPEAGAPLATHPDVDKVAFTGSSATG 243
Query: 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
+ + +Q +K +SLELGG +P +V+ + +L KA A+ F GQ C A +R ++
Sbjct: 244 SKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILH 303
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
E + +F+ + V+ K+ D + C LGP+++ Q EK+ V +A S+GA ++
Sbjct: 304 ESIATEFLNRI-VKWIKNIKISD-PLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILT 361
Query: 379 GGGKVTKLGSKFF-APTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL 437
GG + L FF PTI+T++T +M + EEVFGPV F TEEE++ +AN++ GL
Sbjct: 362 GGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGL 421
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497
+ND+ + RV K + G+V +N T+A +GGVK SG GRE G++ +
Sbjct: 422 GAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLS 481
Query: 498 IK 499
+K
Sbjct: 482 VK 483
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497 | Back alignment and structure |
|---|
Score = 501 bits (1293), Expect = e-175
Identities = 153/479 (31%), Positives = 257/479 (53%), Gaps = 13/479 (2%)
Query: 26 LSTYTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQ 83
+ + YING W + V +P+ +E A + D AI +AK+AF+ W
Sbjct: 22 MLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKT 81
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARR 142
T+P ER +++ L+ E +A+ ++ E G P +L + +S + F + +
Sbjct: 82 TSPHERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKE 141
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
+ + +L + +GVVGLITPWN+PM +T KV PAL AGCT V+KP+E
Sbjct: 142 FSFQEALIEGNEQAIL-HYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIA 200
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PL+A+ A + EA +P GV N++ +VG L P + ISFTGST+ GK +
Sbjct: 201 PLSAMLFAEILDEAALPSGVFNLINGD---GANVGSYLSAHPDLEMISFTGSTRAGKDIS 257
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ S +KR+ LELGG I++++A++ A+ + F N GQ+C A R L+++ ++
Sbjct: 258 KNASNTLKRVCLELGGKGANIIFADADI-DALQRGVRHCFYNSGQSCNAPTRMLVEQAIY 316
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+ ++ K +I + G ++GP+++ Q +K+ ++Q I +GA ++ GG
Sbjct: 317 DKAIKTAK-DIAEKTQVGPGH-QTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTG 374
Query: 383 VTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
+ + + PT+ ++ P M + EE+FGPV + F TE+E++ +AN++ GL Y
Sbjct: 375 LPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNY 434
Query: 441 FFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+ D S+ R+ +++ GMV +N + + FGGVK SG REG G++EF K
Sbjct: 435 IQSQDRSKCRRIAAQVRSGMVEVNGHEL-PGGSYFGGVKFSGRAREGGLWGIKEFLDTK 492
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495 | Back alignment and structure |
|---|
Score = 500 bits (1289), Expect = e-174
Identities = 175/474 (36%), Positives = 253/474 (53%), Gaps = 10/474 (2%)
Query: 29 YTQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPK 87
+ INGE V +K PVYNPA + L ++ + E V A+ +A AF +W QTTPK
Sbjct: 23 QHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPK 82
Query: 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGE 146
R L + +E N Q AE+ ++ GKP + E+ +F+ AR G
Sbjct: 83 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGL 142
Query: 147 LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTA 206
++ ++ R+PLGVV I PWN+P+ M K+APALAAG V+KP+E TPLTA
Sbjct: 143 AAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTA 202
Query: 207 LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266
L LA LA + P GV+N++ +VG L P V +S TGS G+ + SH +
Sbjct: 203 LKLAELAKDI-FPAGVVNILFGRG---KTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258
Query: 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFV 326
IKR +ELGG AP IV+ +A+++ V G + N GQ C AA R Q+ ++D V
Sbjct: 259 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLV 318
Query: 327 EMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGGKVTK 385
E L + G ++ LGPL +LA +E+V V++A + G KVI GG K
Sbjct: 319 EKL-GAAVATLKSGAPD-DESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG 376
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
G ++APT+L D +EVFGPV F EE+ + AN+S GLA +T D
Sbjct: 377 NGY-YYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKD 435
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+ +A RV +LQ G +N + +E GG K SG G++ S +G+E++T ++
Sbjct: 436 VGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVR 489
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503 | Back alignment and structure |
|---|
Score = 500 bits (1289), Expect = e-174
Identities = 170/482 (35%), Positives = 252/482 (52%), Gaps = 15/482 (3%)
Query: 26 LSTYTQAYINGEWVHSS--KKF-PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWS 82
+ T Y G + S PV+ PA L + G E+V A+ SA+ A+ +WS
Sbjct: 16 VVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWS 75
Query: 83 QTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR 142
+ ER V+ + + + +A++ +GK TE+ ++ A +++++ A
Sbjct: 76 KMAGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPT 135
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
G+ + P REPLGV I WN+P + K APALA G V KP+ T
Sbjct: 136 LSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMT 194
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
P+T + LA + HEA +P G++NVV G LLC P+VA +SFTGS GK +
Sbjct: 195 PVTGVILAEIFHEAGVPVGLVNVVQGGAE----TGSLLCHHPNVAKVSFTGSVPTGKKVM 250
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
++ +K ++LELGG +P +++ + L+ AV GA+ A F GQ C R +Q ++
Sbjct: 251 EMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIM 310
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
QF+E + V+ TK+ + GD + +G LI+ Q++KV V A +GA+V+ GG
Sbjct: 311 PQFLEEV-VKRTKAIVVGDPL-LTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEP 368
Query: 383 VTKLGSK-----FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL 437
+T K F +P +L N DM C EE+FGPV + F TEEE L ANN+ GL
Sbjct: 369 LTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGL 428
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497
A FT DIS+A RV L+ G IN IS E FGG K SG GRE + ++ ++Q
Sbjct: 429 ASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQ 488
Query: 498 IK 499
+K
Sbjct: 489 LK 490
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498 | Back alignment and structure |
|---|
Score = 499 bits (1288), Expect = e-174
Identities = 149/477 (31%), Positives = 237/477 (49%), Gaps = 12/477 (2%)
Query: 27 STYTQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTT 85
TQ I + + + + NP + D+ + + A+ +A+ AF WSQTT
Sbjct: 23 MMDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTT 82
Query: 86 PKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTY 144
P ER L + +E A + GKP E+ +F+ R +
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
+ ++ R+P+G+VG I PWN+P+ M+ K+APA+ G T V KP+E TPL
Sbjct: 143 APAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPL 202
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
TAL LA L + +P+GV+NV+T +VG L P V +S TG GK + +
Sbjct: 203 TALKLARLIADI-LPEGVVNVITGRG---ETVGNALINHPKVGMVSITGDIATGKKVLAA 258
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
++ +KR LELGG AP IVY +A+L+ V+G + N GQ C AA R + ++++
Sbjct: 259 AAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEK 318
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
V L + + + +GPLI+ Q ++V S V+ A + I GG+
Sbjct: 319 LVADL-TSAVSTIRYNLDD-DTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGR-- 374
Query: 385 KLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
+ FF PT++ T + EVFGPV +F +++++ AN+S+ GLA +
Sbjct: 375 TGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVW 434
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
T DIS+A R +LQ G IN + E GG+K+SG G++ S + +E++T ++
Sbjct: 435 TKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVR 491
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517 | Back alignment and structure |
|---|
Score = 497 bits (1282), Expect = e-173
Identities = 170/496 (34%), Positives = 257/496 (51%), Gaps = 26/496 (5%)
Query: 16 MHMKYLQKLCLSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMS 73
M M L +I+G++V + F PA E +A + V+ AI S
Sbjct: 1 MVMTIATPLKAQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIAS 60
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSF 132
AK A ++W+ +P RG +LKR + AL+ + T ++GKP E++ +
Sbjct: 61 AKRAQKEWAAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSG--- 117
Query: 133 VDWFSEEARRTYGELVPS-------PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185
D F +G + PS P+ R PLGV I WN+P + K A
Sbjct: 118 ADAF-----EFFGGIAPSALNGDYIPLGGDFAYTKRVPLGVCVGIGAWNYPQQIACWKAA 172
Query: 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPH 245
PAL AG V KP+E+TPL AL +A + EA +PKG+ NV+ R G LL P
Sbjct: 173 PALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDR----DTGPLLVNHPD 228
Query: 246 VAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNC 305
VA +S TGS G+ + + + +K +++ELGG +P IV+ +A+++ AV GAM F +
Sbjct: 229 VAKVSLTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSS 288
Query: 306 GQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365
GQ C R +Q++ +F+E L T++ I GD + +LGPL++ AQ EKV S
Sbjct: 289 GQVCSNGTRVFVQKKAKARFLENL-KRRTEAMILGDPL-DYATHLGPLVSKAQQEKVLSY 346
Query: 366 VQDAISKGAKVILGGGKVTKLGSK--FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423
++ ++GA +I GGG + + + PT+ ++T DM EE+FGPV + F E
Sbjct: 347 IEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDE 406
Query: 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGL 483
+E L AN + GLAG FT D+++A RV L+ G + IN + E FGG K+SG
Sbjct: 407 DEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGF 466
Query: 484 GREGSRHGMEEFTQIK 499
GRE S +E ++++K
Sbjct: 467 GRENSAAALEHYSELK 482
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501 | Back alignment and structure |
|---|
Score = 494 bits (1275), Expect = e-172
Identities = 174/478 (36%), Positives = 265/478 (55%), Gaps = 14/478 (2%)
Query: 29 YTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ---WSQ 83
YT+ +IN EW S KKFPV+NPA +E L +V + EDV A+ +A++AF+ W
Sbjct: 20 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRT 79
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARR 142
ERG +L + +E ++ LA + GK + + ++ + + + A +
Sbjct: 80 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 139
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
G +P + EP+GV G I PWNFP+ M K+ PAL+ G T V+KPAE T
Sbjct: 140 IQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 198
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL + +L EA P GV+N+V + G + + V ++FTGST+VGK++
Sbjct: 199 PLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKLIK 255
Query: 263 SHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
+ +KR+SLELGG +P IV+++A+L AV A F + GQ C+AA+R ++E +
Sbjct: 256 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 315
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FV VE K ++ G+ + GP I+ Q EK+ +++ +GAK+ GGG
Sbjct: 316 YDEFVRRS-VERAKKYVLGN-PLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 373
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ +++T DM EE+FGPV +KFK+ ++ + ANN+ GL+
Sbjct: 374 PWGNKGY-FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGI 432
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FTNDI +A V LQ G V +N + + FGG K SG GRE +G E+T++K
Sbjct: 433 FTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 490
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515 | Back alignment and structure |
|---|
Score = 492 bits (1270), Expect = e-171
Identities = 164/487 (33%), Positives = 257/487 (52%), Gaps = 17/487 (3%)
Query: 26 LSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQ 83
+I GE+V S + FP +PA +E L G +V A +A EAF++WS+
Sbjct: 23 KERPALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSR 82
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEA-RR 142
T KER L R + +E + LA + ++G+ +V A +++E A
Sbjct: 83 TKAKERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHA 142
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
P + VR P G VG+ITPWN P+ + T ++APALA G T V+KPAE +
Sbjct: 143 MEDRTFPVD-RDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWS 201
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
P TA LA + EA +P GV N+V G L P V ++ TG T+ GKI+
Sbjct: 202 PFTATKLAEILKEADLPPGVFNLVQGF---GEEAGAALVAHPLVPLLTLTGETETGKIVM 258
Query: 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+ + +KRLS ELGG +P +V+++A+L++A+ + F G+ C A++R L++E++F
Sbjct: 259 RNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIF 318
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
+ FV + VE ++ G + + +GPLI+ +++V V+ +GA++++GG +
Sbjct: 319 EDFVGKV-VERARAIRVGH-PLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGER 376
Query: 383 VTKLGSK-------FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNT 435
+ PT+ M EE+FGPV V I FK EEE+L AN++
Sbjct: 377 AKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKY 435
Query: 436 GLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495
GLA Y FT D+ +A R+ +L+ GMV +N + H FGGVK SG REG + ++ +
Sbjct: 436 GLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFY 495
Query: 496 TQIKYMC 502
T +K +
Sbjct: 496 TDLKTIA 502
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500 | Back alignment and structure |
|---|
Score = 491 bits (1267), Expect = e-171
Identities = 167/478 (34%), Positives = 255/478 (53%), Gaps = 14/478 (2%)
Query: 29 YTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ---WSQ 83
Q +IN EW + K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 19 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRR 78
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARR 142
RG +L R +E ++ LA + T ++GKP S ++ + +++ A +
Sbjct: 79 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 138
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
+G+ +P EP+GV G I PWNFP+ M K+ PALA G V+K AE T
Sbjct: 139 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 197
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL +A L EA P GV+N+V + G + + V ++FTGST++G+++
Sbjct: 198 PLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 254
Query: 263 SHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
+KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE +
Sbjct: 255 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI 314
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FVE V KS + G+ + K GP ++ Q +K+ + +GAK++ GGG
Sbjct: 315 YDEFVERS-VARAKSRVVGN-PFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA
Sbjct: 373 IAADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 431
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K
Sbjct: 432 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVK 489
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517 | Back alignment and structure |
|---|
Score = 486 bits (1254), Expect = e-169
Identities = 172/485 (35%), Positives = 263/485 (54%), Gaps = 17/485 (3%)
Query: 26 LSTYTQAYINGEWVHSS--KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ--W 81
L Q +I GE+V + K + NP + + V V DV A+ +AKEAFE W
Sbjct: 33 LQMPYQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLW 92
Query: 82 SQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEA 140
+ ++RG +L R +E +++ LA I ++G T +L V + +F+
Sbjct: 93 GKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWC 152
Query: 141 RRTYGELVP-SPVKSKELLM--VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIK 197
+ G +P + + L +EP+GV G++ PWN+P+ M++ K A LAAG T VIK
Sbjct: 153 DKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIK 212
Query: 198 PAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257
PA+ TPLTAL A L +A IPKGV+N++ S + VG+ L P V I FTGST+V
Sbjct: 213 PAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIGFTGSTEV 269
Query: 258 GKILYSHCSQG-IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFL 316
GK + C+ +K++SLELGG +P I++++ +L KAV M++ F N G+ C+AA R
Sbjct: 270 GKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLF 329
Query: 317 IQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376
++E + +QFV+ + VE + G+ N GP + A + K+ Q + +GA +
Sbjct: 330 VEESIHNQFVQKV-VEEVEKMKIGN-PLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATL 387
Query: 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSN 434
+ GG +V + G FF PT+ T++ M EE FGP+ + +F + L AN +
Sbjct: 388 VCGGNQVPRPGF-FFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATE 446
Query: 435 TGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEE 494
GLA FT DI++A V KLQ G V IN + A FGG K+SG G++ + E
Sbjct: 447 FGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNE 506
Query: 495 FTQIK 499
+ +IK
Sbjct: 507 YLRIK 511
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538 | Back alignment and structure |
|---|
Score = 485 bits (1250), Expect = e-168
Identities = 137/484 (28%), Positives = 223/484 (46%), Gaps = 17/484 (3%)
Query: 26 LSTYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
L INGE V + K +NPA D+ + V + + AI SA EAF+ W
Sbjct: 34 LGKEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQTWRNV 93
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
P+ER +L + + K + + E+GKP E+ + A F+++++ +
Sbjct: 94 NPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELN 153
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
++ P+GV I+PWNF +A++ + G T V+KPA TP+
Sbjct: 154 RGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPV 213
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
A + +A +PKGV+N V S VG L P + I+FTGS VG LY
Sbjct: 214 VAAKFVEVLEDAGLPKGVINYVPGS---GAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270
Query: 265 CSQ------GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQ 318
+ +KR+ +E+GG +V +A+L A + + F GQ C A +R +I
Sbjct: 271 AAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIH 330
Query: 319 EQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378
+ V+D+ +E V + K+ GD + N +GP+I+ EK+ S ++ +G +++
Sbjct: 331 KDVYDEVLEKT-VALAKNLTVGDPT-NRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMT 387
Query: 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLA 438
GG + G F PTI+ ++ P+ + EE+FGPV K + +L +ANN+ GL
Sbjct: 388 GGEGDSSTGF-FIQPTIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLT 446
Query: 439 GYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLG-REGSRHGMEEF 495
G T + + + ++ VG + N FGG K SG + G +
Sbjct: 447 GAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALH 506
Query: 496 TQIK 499
Q K
Sbjct: 507 MQAK 510
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516 | Back alignment and structure |
|---|
Score = 482 bits (1244), Expect = e-167
Identities = 133/485 (27%), Positives = 222/485 (45%), Gaps = 19/485 (3%)
Query: 26 LSTYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
+ YI GEWV + ++ NP+ E + G + + A+ +A +AF+ W
Sbjct: 34 FGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDW 93
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
++R +L + + K+ L + E GK E+ +V A F+++++ A R
Sbjct: 94 PQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYR 153
Query: 145 GELVPSPVKSKELLM-VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTP 203
V E PLG +I PWNFP+A+ T + +A G T + KPAED
Sbjct: 154 YPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAV 213
Query: 204 LTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263
+ + + HEA P GV+N + VG L P + I+FTGS +VG +Y
Sbjct: 214 VVGAKVFEIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYE 270
Query: 264 HCSQ------GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLI 317
+ KR +E GG IV A+ A G + + + GQ C AA+R ++
Sbjct: 271 AAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLIL 330
Query: 318 QEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVI 377
+ ++ +E + ++ + G + +LGP+++ Q KV S ++ ++G +++
Sbjct: 331 TQGAYEPVLERV-LKRAERLSVGPA--EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLV 386
Query: 378 LGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGL 437
LGG ++ G F APT+ T + P EE+FGPV I+ K E+L VAN++ GL
Sbjct: 387 LGGKRLEGEGY-FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGL 445
Query: 438 AGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLGRE-GSRHGMEE 494
G ++ ++ VG + N I FGG K SG + G+ +
Sbjct: 446 TGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRL 505
Query: 495 FTQIK 499
F ++K
Sbjct: 506 FLEMK 510
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534 | Back alignment and structure |
|---|
Score = 467 bits (1205), Expect = e-161
Identities = 92/518 (17%), Positives = 176/518 (33%), Gaps = 52/518 (10%)
Query: 26 LSTYTQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
++ + ++ G+W+ + + +P L V G++ + + ++
Sbjct: 4 MTELLKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRAL 63
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
T +R L +K L+ + I T SG +S ++ + ++++
Sbjct: 64 TYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLG 123
Query: 145 GELVPSPVKSKEL---------LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCV 195
++ L ++ GV I +NFP + K APAL +G +
Sbjct: 124 EVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVI 183
Query: 196 IKPAEDTPLTALALAALAHEAQI-PKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGS 254
+KPA T + A +A I P G L+++ S LL +SFTGS
Sbjct: 184 VKPATATAWLTQRMVADVVDAGILPPGALSIICG------SSAGLLDQIRSFDVVSFTGS 237
Query: 255 TQVGKILYSHCSQGIK--RLSLELGGNAPFIVYSNAN-----LQKAVSGAMAAKFRNCGQ 307
L +H + + RL+++ I+ ++A + + GQ
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQ 297
Query: 308 ACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367
C A R + E + +E L G+ ND +G L++ Q E V + +
Sbjct: 298 KCTAIRRAFVPEAALEPVLEAL-KAKLAKITVGNPR-NDAVRMGSLVSREQYENVLAGIA 355
Query: 368 DAISKGAKVILGGGKVTKLGSK----FFAPTIL--TNITPDMLCYTEEVFGPVAVCIKFK 421
+ AP + + L + EVFGPVA ++
Sbjct: 356 ALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAPYR 415
Query: 422 T--------EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN--------- 464
E ++ +A L ++ND + R+ +L ++
Sbjct: 416 VTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHS 475
Query: 465 --EGIISHTEAAFGGVKESGLGRE-GSRHGMEEFTQIK 499
+ GG +G G E G + + +
Sbjct: 476 QTGHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRS 513
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528 | Back alignment and structure |
|---|
Score = 421 bits (1084), Expect = e-143
Identities = 117/524 (22%), Positives = 190/524 (36%), Gaps = 59/524 (11%)
Query: 10 SVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSS---KKFPVYNPANDEHLADVPDMGVED 66
V + ++ + + + + + GEW+ + P + PA+D + V E
Sbjct: 10 GVDLGTENLYFQSMMIFTPKGKHLVAGEWLDGAGTFASAPAHGPAHDFAVGTV-----EL 64
Query: 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEV 126
V A +A+EAF + ++ KER L+ E+E +A+ EI +QE+G P GE
Sbjct: 65 VNRACEAAEEAFWTYGYSSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGER 124
Query: 127 VYANSFVDWFSEEAR------RTYGELVP--SPVKSKELLMVREPLGVVGLITPWNFPMA 178
+ F++ R +P P +E+ +V+ P+G V + NFP+A
Sbjct: 125 GRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGASNFPLA 184
Query: 179 MIT--RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ----IPKGVLNVVTSSRTN 232
T A ALAAGC V+K P T +A A + GV +++
Sbjct: 185 FSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQ---GG 241
Query: 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIK--RLSLELGGNAPFIVYSNANL 290
+ VG L PH+ + FTGS G+ L+ C+ + ELG P + A
Sbjct: 242 SRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALK 301
Query: 291 QKA---VSGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQGDTSKND 346
+A G + GQ C ++ E D+F + K Q
Sbjct: 302 ARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVEALAKVAPQ------- 354
Query: 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDML-- 404
L I A + A K +L + +P + L
Sbjct: 355 -TMLTDGIAKAYRDGQARF---ATRNAVKPLLATES----SGRDASPNLFETTGAQFLAD 406
Query: 405 -CYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFT--NDISQAWRVGKKLQ--VG 459
EEVFGP+ + ++ + E +A L D+ A R+ L+ G
Sbjct: 407 HALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAG 466
Query: 460 MVGINE---GIISHTEAAFGG-VKESGLGREGS--RHGMEEFTQ 497
V +N G+ GG S S + F +
Sbjct: 467 RVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLR 510
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026 | Back alignment and structure |
|---|
Score = 414 bits (1065), Expect = e-134
Identities = 120/480 (25%), Positives = 210/480 (43%), Gaps = 17/480 (3%)
Query: 30 TQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+ING+ V ++ P NP E L + G +V AI +AK AF W T P+
Sbjct: 532 YPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPAWRDTDPRT 591
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R L + + L+ E GK ++ +V A F+++++ E R
Sbjct: 592 RAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQR 651
Query: 149 PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALA 208
+ EP GV +I PWNFP+A+ + A+ G V KP+ T +
Sbjct: 652 VGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWH 711
Query: 209 LAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ- 267
L L EA +P+GV N + +G L P ++ I+FTGS + G + ++
Sbjct: 712 LVELFREAGLPEGVFNFTPGRG---SVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKV 768
Query: 268 -----GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
+K++ E+GG I+ +A+L +AV + + F GQ C A +R ++ + V+
Sbjct: 769 HPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVY 828
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
D+F+E L V + K+ G + + +G + + ++ + + +G +
Sbjct: 829 DKFIERL-VSMAKATKVGPSE-DPANYMGAVADDKAMKSIKEYAEIGKREGHVL-YESPV 885
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442
G F TI+ I P+ EE+FGPV ++ K ++++ AN++ L G F
Sbjct: 886 PAGEGY-FVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIF 944
Query: 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAA--FGGVKESGLG-REGSRHGMEEFTQIK 499
+ + ++ +VG + IN FGG + SG+G + G + F +
Sbjct: 945 SRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510 | Back alignment and structure |
|---|
Score = 387 bits (996), Expect = e-130
Identities = 89/489 (18%), Positives = 170/489 (34%), Gaps = 46/489 (9%)
Query: 41 SSKKFPVYNPANDEHLA-DVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKE 99
+ F N E L P +V A +A + + + +R +L+ E
Sbjct: 5 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 64
Query: 100 LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV--------PSP 151
LE + E+ P GE+ + + F++ +P
Sbjct: 65 LEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP 124
Query: 152 VKSKELLMVREPLGVVGLITPWNFPMAMITR--KVAPALAAGCTCVIKPAEDTPLTALAL 209
+ ++ + LG V + NFP+A A ALAAGC ++K P T+ +
Sbjct: 125 LPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 184
Query: 210 AALAHEAQ----IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
A +A +P+ + ++ + ++G+ L + P + + FTGS G+ L++
Sbjct: 185 AECIEQALKQEQLPQAIFTLLQGN---QRALGQALVSHPEIKAVGFTGSVGGGRALFNLA 241
Query: 266 SQGIKRLS--LELGGNAPFIVYSNANLQKA--VSGAMAAKFRNCGQACVAANR-FLIQEQ 320
+ + + ELG P ++ +A KA +A+ CGQ C F +
Sbjct: 242 HERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTP 301
Query: 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGG 380
F+E + I + + L P I + +V S D G V
Sbjct: 302 ETQAFIETAQSLIRQQ--------SPSTLLTPGIRDSYQSQVVSRGSDD---GIDVTFSQ 350
Query: 381 GKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGY 440
+ + S F + + + EE+FGP ++ + + + L ++ L
Sbjct: 351 AESPCVASALFVTS--SENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTAT 408
Query: 441 FFT--NDISQAWRVGKKLQ--VGMVGINE---GIISHTEAAFGGVKES---GLGREGSRH 490
D Q ++ +L+ G + N G+ GG +
Sbjct: 409 IHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468
Query: 491 GMEEFTQIK 499
+ + +
Sbjct: 469 AIHRWLRPV 477
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486 | Back alignment and structure |
|---|
Score = 333 bits (855), Expect = e-109
Identities = 149/477 (31%), Positives = 233/477 (48%), Gaps = 21/477 (4%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
YINGEWV + + V NPA E L VP ED+ YA +A EAF+ WS+ R
Sbjct: 9 YINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRA 68
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
+L + + L +K+ LA ++T E+GK E+LGEV V++ + G+ + S
Sbjct: 69 RILFNFQQLLSQHKEELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLAS 128
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITR-KVAPALAAGCTCVIKPAEDTPLTALAL 209
E R P+GVVG I P+NFP M+ A+A G T ++KP+E TPL L
Sbjct: 129 IATDVEAANYRYPIGVVGGIAPFNFP-MMVPCWMFPMAIALGNTFILKPSERTPLLTEKL 187
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
L +A +PKGV NVV + N + P + ISF GS VG+ +Y S+ +
Sbjct: 188 VELFEKAGLPKGVFNVVYGAHDVVNG----ILEHPEIKAISFVGSKPVGEYVYKKGSENL 243
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
KR+ G IV ++ANL+ V+ + A F + G+ C+A ++E + D+F+ L
Sbjct: 244 KRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIADEFMAKL 303
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
E G+ +D LGP+I ++ S ++ + +GA+++ G +
Sbjct: 304 -QEKVADIKIGN-GLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGY 361
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQA 449
F PTI N+T +M + +E+F PV I+ K +E++ +AN S FT++ +
Sbjct: 362 FVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAI 421
Query: 450 WRVGKKLQVGMVGINEGI----ISHTEAAFGGVKESGLGREGSRHGMEE---FTQIK 499
+ + GM+GIN G+ F G K S G +G + +T+ K
Sbjct: 422 RYFRENIDAGMLGINLGVPAPMAFFP---FSGWKSSFFG-TLHANGKDSVDFYTRKK 474
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001 | Back alignment and structure |
|---|
Score = 340 bits (874), Expect = e-107
Identities = 127/479 (26%), Positives = 207/479 (43%), Gaps = 29/479 (6%)
Query: 34 INGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVL 93
+ + + A L + D + A+ +A+ F WS+T R L
Sbjct: 519 VEFGARTALDQLLTDVKAETGDLKPIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAAL 578
Query: 94 KRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVK 153
++ LE ++ +E GK ++L E+ A F +++ + R+ +G P
Sbjct: 579 EQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGP 638
Query: 154 SKEL-LMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212
+ E + GV I+PWNFP+A+ +V AL AG + V KPAE TP A AL
Sbjct: 639 TGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVAL 698
Query: 213 AHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG---I 269
HEA IPK L +VT +G L P +AG+ FTGST+V + + + I
Sbjct: 699 LHEAGIPKSALYLVTGDG----RIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPI 754
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEML 329
L E GG I + A ++ + + FR+ GQ C A +QE V D+ +EM+
Sbjct: 755 VPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMV 814
Query: 330 KVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389
+ GD S + ++GP+I++ +++D+ + ++ ++ G
Sbjct: 815 -AGAARELKIGDPS-DVATHVGPVIDVEAKQRLDAHIARMKTEA-RLHFAGPAPE---GC 868
Query: 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSNTGLAGYFFTNDIS 447
F AP I L TEEVFGP+ ++++ E E L + GL +
Sbjct: 869 FVAPHIFELTEAGQL--TEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDD 926
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAA------FGGVKESGLG-REGSRHGMEEFTQIK 499
+ ++QVG + +N +I A FGG SG G + G H + F +
Sbjct: 927 SIEAIIDRVQVGNIYVNRNMI----GAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQ 981
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521 | Back alignment and structure |
|---|
Score = 325 bits (835), Expect = e-106
Identities = 132/481 (27%), Positives = 237/481 (49%), Gaps = 25/481 (5%)
Query: 33 YINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+I+G+ V S + ++NPA E V D+ A+ SAK A +W+ T P+ R
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAATNPQRRA 89
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPS 150
V ++++ L N LAE++++E GK ++ G++V ++ E
Sbjct: 90 RVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEG 149
Query: 151 PVKSKELLMVREPLGVVGLITPWNFPMAMITR-KVAPALAAGCTCVIKPAEDTPLTALAL 209
++ +R+P+G+ ITP+NFP MI APA+A G ++KP+E P + L
Sbjct: 150 AGPGIDMYSIRQPVGIGAGITPFNFP-GMIPMWMFAPAIACGNAFILKPSERDPSVPIRL 208
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269
A L EA +P G+LNVV + ++ + T P +A +SF GST + + +Y +
Sbjct: 209 AELMIEAGLPAGILNVVNGDKGAVDA----ILTHPDIAAVSFVGSTPIARYVYGTAAMNG 264
Query: 270 KRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN-RFLIQEQVFDQFVEM 328
KR G I+ +A+L +A + + A + + G+ C+A + + E+ ++ ++
Sbjct: 265 KRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDK 324
Query: 329 LKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS 388
L V + +S G ++K ++GP++ +++ S++ I +GAK+++ G G
Sbjct: 325 L-VPMVESLRIGP-YTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGY 382
Query: 389 K---FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ F + ++TPDM Y E+FGPV ++ + EE+L + G +T D
Sbjct: 383 ENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRD 442
Query: 446 ISQAWRVGKKLQVGMVGINEGI----ISHTEAAFGGVKESGLGREGSRHGMEE---FTQI 498
A ++ +GMVG+N I H+ FGG K S G + ++HG + +T+
Sbjct: 443 GDAARDFASRINIGMVGVNVPIPVPLAYHS---FGGWKSSSFG-DLNQHGTDSIKFWTRT 498
Query: 499 K 499
K
Sbjct: 499 K 499
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464 | Back alignment and structure |
|---|
Score = 305 bits (782), Expect = 8e-99
Identities = 75/437 (17%), Positives = 157/437 (35%), Gaps = 45/437 (10%)
Query: 56 LADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES 115
L D +++V+ I SA +A ++ + + ++ ++K G ++ LA++ +E+
Sbjct: 3 LEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEET 62
Query: 116 GKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNF 175
G + S + + +T G + K+++ V PLGVV + P
Sbjct: 63 GFGIWQDKVIKNVFASKHVYNYIKDMKTIG--MLKEDNEKKVMEVAVPLGVVAGLIPSTN 120
Query: 176 PMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL----AHEAQIPKGVLNVVTSSRT 231
P + + K ++ AG + V P + L + A +A PKG ++ +T
Sbjct: 121 PTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMT---V 177
Query: 232 NANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQ 291
L A I TG + + K YS GN P + +AN+
Sbjct: 178 PTIQGTDQLMKHKDTAVILATGGSAMVKAAYSS----GTPAIGVGPGNGPAFIERSANIP 233
Query: 292 KAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK------N 345
+AV + +K + G C + +++ + + + + + +
Sbjct: 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILR 293
Query: 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLC 405
++ P I V+ + ++ + A+V++ T + +
Sbjct: 294 PNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAE---------------ETKVGAKIP- 337
Query: 406 YTEEVFGPVAVCIKFKTEEESLCVANNS----NTGLAGYFFTNDISQAWRVGKKLQVGMV 461
Y+ E P+ +T +E+ ++ + G + D K V +
Sbjct: 338 YSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRL 397
Query: 462 GINEGIISHTEAAFGGV 478
+N T A GG+
Sbjct: 398 LVN------TPGALGGI 408
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452 | Back alignment and structure |
|---|
Score = 293 bits (753), Expect = 1e-94
Identities = 79/431 (18%), Positives = 155/431 (35%), Gaps = 36/431 (8%)
Query: 59 VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP 118
+P + ++ I K+A E+++ + ++ + + + LA+ +ESG
Sbjct: 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMG 60
Query: 119 PTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMA 178
E + S + + +T G + + + + EP+G++ I P P +
Sbjct: 61 IVEDKVIKNHFASEFIYNKYKDEQTCG--ILEEDDNLGTMTIAEPVGIICGIVPTTNPTS 118
Query: 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQI----PKGVLNVVTSSRTNAN 234
K +L + P + A L +A + PK ++ + +
Sbjct: 119 TAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQP---SV 175
Query: 235 SVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAV 294
+ L +A I TG + K YS K GN P ++ A++++AV
Sbjct: 176 ELSNALMKHDDIALILATGGPGMVKAAYSSG----KPAIGVGAGNVPVVIDETADIKRAV 231
Query: 295 SGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLI 354
+ + +K + G C + ++ ++V+D+ E + DK LI
Sbjct: 232 ASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFA-SHKAHVLSKT--DADKVRKVLLI 288
Query: 355 NLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPV 414
+ A K+ AI++ A G KV +K L ++ D + E P
Sbjct: 289 DGALNAKIVGQPATAIAEMA-----GVKVPA-DTKVLIGEGLGKVSYDD-AFAHEKLSPT 341
Query: 415 AVCIKFKTEEESLCVA----NNSNTGLAGYFFTNDISQAWRV---GKKLQVGMVGINEGI 467
+ E+++ A G +TN A R+ G K++ + IN
Sbjct: 342 LGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILIN--- 398
Query: 468 ISHTEAAFGGV 478
GG+
Sbjct: 399 ---IPTTHGGI 406
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563 | Back alignment and structure |
|---|
Score = 270 bits (692), Expect = 3e-84
Identities = 110/489 (22%), Positives = 195/489 (39%), Gaps = 32/489 (6%)
Query: 33 YINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
+ E V +S +P N +A + AI +A A ++W +R
Sbjct: 67 VVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRAQ 126
Query: 92 VLKRWLKELEG-NKQALAEIMTQESGKPPTE-SLGEVVYANSFVDWFSEEARRTYGELVP 149
V + L G + + GK + + F + ++ A GE
Sbjct: 127 VFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPI 186
Query: 150 SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
S S + R G V I+P+NF A+ G + KP++ L + A+
Sbjct: 187 SVPPSTNHTVYRGLEGFVAAISPFNFT-AIGGNLAGAPALMGNVVLWKPSDTAMLASYAV 245
Query: 210 AALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ-- 267
+ EA +P ++ V + + G + +S H+ GI+FTGS K L+ +Q
Sbjct: 246 YRILREAGLPPNIIQFVPAD---GPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNL 302
Query: 268 ----GIKRLSLELGG-NAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322
RL+ E GG N V+S+A++ VSG + + F GQ C A +R + + ++
Sbjct: 303 DRFRTFPRLAGECGGKNF-HFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLW 361
Query: 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382
Q L +E GD +++ +I+ ++ ++ A S + IL GG+
Sbjct: 362 PQIKGRL-LEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQ 420
Query: 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE--EESLCVANNSNT-GLAG 439
+ + P I+ + P EE+FGPV + + E+L + +++ + GL G
Sbjct: 421 CNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTG 480
Query: 440 YFFTNDISQAWRVGKKLQ--VGMVGINEGIISHTEAA------FGGVKESGLG-REGSRH 490
F D + + L+ G IN+ + FGG + SG + G H
Sbjct: 481 AVFAQDKAIVQEATRMLRNAAGNFYINDKST----GSVVGQQPFGGARASGTNDKPGGPH 536
Query: 491 GMEEFTQIK 499
+ +T +
Sbjct: 537 YILRWTSPQ 545
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469 | Back alignment and structure |
|---|
Score = 235 bits (602), Expect = 5e-72
Identities = 115/449 (25%), Positives = 199/449 (44%), Gaps = 36/449 (8%)
Query: 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES- 122
+ + A+ A+ AF + R L+ + ++ +Q L + + K +
Sbjct: 17 MSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAY 76
Query: 123 -------LGEVVYA-NSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWN 174
L E+ Y +W ++E + + EPLGVV +I WN
Sbjct: 77 YEEVVYVLEEIEYMIQKLPEWAADEPVEK--TPQTQQDELY---IHSEPLGVVLVIGTWN 131
Query: 175 FPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNAN 234
+P + + + A+AAG V+KP+E + A LA + + + K + V+
Sbjct: 132 YPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGV---- 186
Query: 235 SVGKLLCTSP--HVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292
L H I +TGST VGKI+ + ++ + ++LELGG +P V N +L
Sbjct: 187 PETTELLKERFDH---ILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDV 243
Query: 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352
A KF N GQ CVA + L + +Q VE LK + + + G+ +K + + G
Sbjct: 244 ACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY--GEDAKKSR-DYGR 300
Query: 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFG 412
+I+ ++V ++ +G KV GG +++ APTILT++ P EE+FG
Sbjct: 301 IISARHFQRVMGLI-----EGQKVAYGGTGDAA--TRYIAPTILTDVDPQSPVMQEEIFG 353
Query: 413 PVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SH 470
PV + ++ EE++ N LA Y F+++ ++ + G V N+ I+ +
Sbjct: 354 PVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIVHITL 413
Query: 471 TEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FGGV SG+G + E F+ +
Sbjct: 414 HSLPFGGVGNSGMGSYHGKKSFETFSHRR 442
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457 | Back alignment and structure |
|---|
Score = 218 bits (556), Expect = 2e-65
Identities = 107/461 (23%), Positives = 197/461 (42%), Gaps = 39/461 (8%)
Query: 53 DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMT 112
D+ + + + + K F + R L+R + + NK+AL +
Sbjct: 16 DDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALA 75
Query: 113 QESGKPPTES--------LGEVVYA-NSFVDWFSEEARRTYGELVPSPVKSKELLMVREP 163
++ GKP L E+ +A +W + + + + +P + +V+EP
Sbjct: 76 EDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPS--PDIIAPSECY---VVQEP 130
Query: 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVL 223
GV +I P+N+P+ + + A+ G TC+IKP+E TP T+ + + EA +
Sbjct: 131 YGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYV 189
Query: 224 NVVTSSRTNANSVGKLLCTSP--HVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP 281
V+ R L + P I FTGS VGK++ ++ + + LELGG P
Sbjct: 190 AVIQGGR----DENSHLLSLPFDF---IFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCP 242
Query: 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341
IV +A+L + V+ M KF N GQ +A + + V D +E L +
Sbjct: 243 LIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---- 298
Query: 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITP 401
+ + G L+ QV+++ S+++ +V++G + + + T++ +
Sbjct: 299 ---PEINSTGKLVTERQVQRLVSLLEAT---QGQVLVGSQ--ADVSKRALSATVVDGVEW 350
Query: 402 DMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN-TGLAGYFFTNDISQAWRVGKKLQVGM 460
+ +EE+FGP+ ++F + ++ N + LA Y F D+ A + ++Q G
Sbjct: 351 NDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGD 410
Query: 461 VGINEGI--ISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
+N + FGG+ SG+G FT K
Sbjct: 411 AQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKK 451
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 2e-08
Identities = 61/457 (13%), Positives = 126/457 (27%), Gaps = 161/457 (35%)
Query: 36 GEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVL- 93
GE + K V+ A ++ D D V+D+ +I+S +E + L
Sbjct: 12 GEHQYQYKDILSVFEDAFVDNF-DCKD--VQDMPKSILSKEEIDHIIMSKDAVSGTLRLF 68
Query: 94 -----------KRWLKE-LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR 141
+++++E L N + L + E +P S+ +Y E+
Sbjct: 69 WTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQP---SMMTRMY--------IEQRD 117
Query: 142 RTYGE---LVPSPVKSKELLM-VREPL-------GVV--GLITPWNFPMAMITRKVAPAL 188
R Y + V + + +R+ L V+ G +
Sbjct: 118 RLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG--------V----------- 158
Query: 189 AAGC--TCVIKPAEDTPLTALALAALAHEAQIPKGV--LNVVTSSRTNANSVGKLLCTSP 244
G T + + + ++ + LN + C SP
Sbjct: 159 -LGSGKTW---------VALDVCLSYKVQCKMDFKIFWLN-----------LKN--CNSP 195
Query: 245 HVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAK-FR 303
V ++L Q I ++ I ++Q + + +K +
Sbjct: 196 E----------TVLEMLQKLLYQ-IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYE 244
Query: 304 NCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV- 362
NC L+ V + + +F N C K+
Sbjct: 245 NC---------LLVLLNVQN-------AKAWNAF-------NLSC------------KIL 269
Query: 363 ----DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418
V D L T + + T +TPD + + +
Sbjct: 270 LTTRFKQVTDF--------LSAATTTHISLDHHSMT----LTPD---EVKSLL---LKYL 311
Query: 419 KFKTEE--ESLCVANNSNTGLAGYFFTNDIS--QAWR 451
+ ++ + N + + ++ W+
Sbjct: 312 DCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 507 | |||
| 2wme_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 3ifg_A | 484 | Succinate-semialdehyde dehydrogenase (NADP+); niai | 100.0 | |
| 3ek1_A | 504 | Aldehyde dehydrogenase; ssgcid, oxidoreductase, st | 100.0 | |
| 3ed6_A | 520 | Betaine aldehyde dehydrogenase; structural genomic | 100.0 | |
| 3rh9_A | 506 | Succinate-semialdehyde dehydrogenase (NAD(P)(+)); | 100.0 | |
| 4f3x_A | 498 | Putative aldehyde dehydrogenase; structural genomi | 100.0 | |
| 3k2w_A | 497 | Betaine-aldehyde dehydrogenase; structural genomic | 100.0 | |
| 2o2p_A | 517 | Formyltetrahydrofolate dehydrogenase; aldehyde deh | 100.0 | |
| 3jz4_A | 481 | Succinate-semialdehyde dehydrogenase [NADP+]; tetr | 100.0 | |
| 4e4g_A | 521 | Methylmalonate-semialdehyde dehydrogenase; structu | 100.0 | |
| 3u4j_A | 528 | NAD-dependent aldehyde dehydrogenase; PSI-biology, | 100.0 | |
| 3iwj_A | 503 | Putative aminoaldehyde dehydrogenase; rossmann fol | 100.0 | |
| 3qan_A | 538 | 1-pyrroline-5-carboxylate dehydrogenase 1; proline | 100.0 | |
| 3prl_A | 505 | NADP-dependent glyceraldehyde-3-phosphate dehydro; | 100.0 | |
| 1a4s_A | 503 | ALDH, betaine aldehyde dehydrogenase; oxidoreducta | 100.0 | |
| 3i44_A | 497 | Aldehyde dehydrogenase; oxidoreductase, structural | 100.0 | |
| 2d4e_A | 515 | 5-carboxymethyl-2-hydroxymuconate semialdehyde deh | 100.0 | |
| 1bxs_A | 501 | Aldehyde dehydrogenase; retinal, class 1, tetramer | 100.0 | |
| 2imp_A | 479 | Lactaldehyde dehydrogenase; protein-lactate-NADH t | 100.0 | |
| 3r31_A | 517 | BADH, betaine aldehyde dehydrogenase; structural g | 100.0 | |
| 1wnd_A | 495 | Putative betaine aldehyde dehydrogenase; NADH, flu | 100.0 | |
| 1o04_A | 500 | Aldehyde dehydrogenase, mitochondrial precursor; A | 100.0 | |
| 3b4w_A | 495 | Aldehyde dehydrogenase; RV0223C-NAD complex, struc | 100.0 | |
| 3pqa_A | 486 | Lactaldehyde dehydrogenase; structural genomics, p | 100.0 | |
| 2ve5_A | 490 | BADH, betaine aldehyde dehydrogenase; aldehyde oxi | 100.0 | |
| 2w8n_A | 487 | Succinate-semialdehyde dehydrogenase, mitochondria | 100.0 | |
| 3ros_A | 484 | NAD-dependent aldehyde dehydrogenase; nysgrc, PSI- | 100.0 | |
| 3r64_A | 508 | NAD dependent benzaldehyde dehydrogenase; structur | 100.0 | |
| 1euh_A | 475 | NADP dependent non phosphorylating glyceraldehyde- | 100.0 | |
| 4dng_A | 485 | Uncharacterized aldehyde dehydrogenase ALDY; struc | 100.0 | |
| 2j6l_A | 500 | Aldehyde dehydrogenase family 7 member A1; NAD, re | 100.0 | |
| 1uzb_A | 516 | 1-pyrroline-5-carboxylate dehydrogenase; oxidoredu | 100.0 | |
| 1t90_A | 486 | MMSDH, probable methylmalonate-semialdehyde dehydr | 100.0 | |
| 1uxt_A | 501 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+); | 100.0 | |
| 3ty7_A | 478 | Putative aldehyde dehydrogenase SAV2122; structura | 100.0 | |
| 3etf_A | 462 | Putative succinate-semialdehyde dehydrogenase; cen | 100.0 | |
| 4e3x_A | 563 | Delta-1-pyrroline-5-carboxylate dehydrogenase, mit | 100.0 | |
| 3ju8_A | 490 | Succinylglutamic semialdehyde dehydrogenase; alpha | 100.0 | |
| 4h7n_A | 474 | Aldehyde dehydrogenase; structural genomics, PSI-b | 100.0 | |
| 4f9i_A | 1026 | Proline dehydrogenase/delta-1-pyrroline-5-carboxy | 100.0 | |
| 2y53_A | 534 | Aldehyde dehydrogenase (BOX pathway); oxidoreducta | 100.0 | |
| 3lns_A | 457 | Benzaldehyde dehydrogenase; oxidoreductase, NADP+, | 100.0 | |
| 3sza_A | 469 | Aldehyde dehydrogenase, dimeric NADP-preferring; A | 100.0 | |
| 3v4c_A | 528 | Aldehyde dehydrogenase (NADP+); structural genomic | 100.0 | |
| 3haz_A | 1001 | Proline dehydrogenase; proline utilization A, PUTA | 100.0 | |
| 1ez0_A | 510 | ALDH, aldehyde dehydrogenase; nucleotide binding d | 100.0 | |
| 2h5g_A | 463 | Delta 1-pyrroline-5-carboxylate synthetase; dehydr | 100.0 | |
| 3k9d_A | 464 | LMO1179 protein, aldehyde dehydrogenase; structura | 100.0 | |
| 1vlu_A | 468 | Gamma-glutamyl phosphate reductase; YOR323C, struc | 100.0 | |
| 1o20_A | 427 | Gamma-glutamyl phosphate reductase; TM0293, struct | 100.0 | |
| 4ghk_A | 444 | Gamma-glutamyl phosphate reductase; structural gen | 100.0 | |
| 3my7_A | 452 | Alcohol dehydrogenase/acetaldehyde dehydrogenase; | 100.0 | |
| 4gic_A | 423 | HDH, histidinol dehydrogenase; protein structure i | 97.64 | |
| 1kae_A | 434 | HDH, histidinol dehydrogenase; L-histidinol dehydr | 97.25 |
| >2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-113 Score=898.05 Aligned_cols=474 Identities=34% Similarity=0.558 Sum_probs=449.1
Q ss_pred hccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHh
Q psy3132 25 CLSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEG 102 (507)
Q Consensus 25 ~~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~ 102 (507)
.++...++||||+|+++.++ ++++||+||+++++++.++.+|+++|+++|++||+.|+++++++|.++|+++++.|++
T Consensus 2 ~~~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 45667789999999976543 9999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 103 NKQALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 103 ~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
++++|++++++|+|||+.+++. |+..+++.++||+++++++.+...+. .++...+++++|+|||++|+|||||+.+.+
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~ 160 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPL-RETSFVYTRREPLGVVAGIGAWNYPVQIAL 160 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEE-ETTEEEEEEEEECSEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccc-cCCcceeEEecceeEEEEeccccCcchhhh
Confidence 9999999999999999999985 69999999999999998877655443 346678899999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|
T Consensus 161 ~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~---g~~~g~~L~~~p~v~~I~FTGS~~~G~~i 237 (490)
T 2wme_A 161 WKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGS---GREVGQWLTEHPLIEKISFTGGTSTGKKV 237 (490)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred hhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCC---hHHHHHHHHhCCCCCEEEEECChHHHHHH
Confidence 999999999999999999999999999999999999999999999985 67899999999999999999999999988
Q ss_pred HH-hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 262 YS-HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 262 ~~-~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
.+ .+++++||++||||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 238 ~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-l~vG 316 (490)
T 2wme_A 238 MASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQR-IRLG 316 (490)
T ss_dssp HHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBS
T ss_pred HHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHh-CcCC
Confidence 76 556789999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEe
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVC 417 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v 417 (507)
+|.+++ +++||++++.+++++.++|++++.+|+++++||..... .+|+|++|||+.+++++|++++||+||||++|
T Consensus 317 dp~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 395 (490)
T 2wme_A 317 DPQDEN-TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSI 395 (490)
T ss_dssp CTTSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred CCcccc-CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEE
Confidence 999999 99999999999999999999999999999999986542 25899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchh
Q psy3132 418 IKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQ 497 (507)
Q Consensus 418 ~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~ 497 (507)
++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+||++|++||++||+
T Consensus 396 ~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~ 475 (490)
T 2wme_A 396 LVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTR 475 (490)
T ss_dssp EEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEE
T ss_pred EEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999877777889999999999999999999999999
Q ss_pred ceEEEec
Q psy3132 498 IKYMCFG 504 (507)
Q Consensus 498 ~k~v~~~ 504 (507)
.|+|+++
T Consensus 476 ~K~v~i~ 482 (490)
T 2wme_A 476 IKSVQVE 482 (490)
T ss_dssp EEEEEEE
T ss_pred eeEEEEE
Confidence 9999875
|
| >3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-109 Score=869.94 Aligned_cols=470 Identities=48% Similarity=0.885 Sum_probs=448.9
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 91 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRWFDLVIANSDD 91 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975433 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++|++..+++..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 92 la~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a~ 171 (484)
T 3ifg_A 92 LALILTTEQGKPLAEAKGEIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGP 171 (484)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHHHHH
Confidence 99999999999999999999999999999999888766655443335678899999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 172 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~---~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 172 ALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGD---PKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCC---CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999974 6789999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 249 ~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 327 (484)
T 3ifg_A 249 PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSK-LKVGRGTESG 327 (484)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT
T ss_pred ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 328 -~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 405 (484)
T 3ifg_A 328 -ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHAL-GHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEEL 405 (484)
T ss_dssp -CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTT-CTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred -CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHH
Confidence 99999999999999999999999999999999987543 6999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|+||+|+++|++|+++||+.|+|+++
T Consensus 406 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 406 VRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 999999999999999999999999999999999999999766678999999999999999999999999999999764
|
| >3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-108 Score=868.09 Aligned_cols=469 Identities=48% Similarity=0.858 Sum_probs=448.7
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.+++++|.++|+++++.|++++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 111 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKWFDLIIANADD 111 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4578999999986433 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++|++.++++..+...+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 112 la~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ 191 (504)
T 3ek1_A 112 IALIMTSEQGKPLAEARGEVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAP 191 (504)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999988776655444345677899999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.++
T Consensus 192 ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~---~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 192 ALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGK---AREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCC---CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999974 6789999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 269 ~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~ 347 (504)
T 3ek1_A 269 PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKE-LKVGNGTEPG 347 (504)
T ss_dssp GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHT-CCBSCTTSTT
T ss_pred hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhh-cccCCCcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++||++++.+++++.+++++++++|+++++||... +|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 348 -~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 423 (504)
T 3ek1_A 348 -VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKEL---GGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEV 423 (504)
T ss_dssp -CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHH
T ss_pred -CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccC---CCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999862 5999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 424 i~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~ 502 (504)
T 3ek1_A 424 IAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAY 502 (504)
T ss_dssp HHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEEC
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999999988777788999999999999999999999999999998763
|
| >3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-108 Score=868.99 Aligned_cols=474 Identities=35% Similarity=0.610 Sum_probs=450.5
Q ss_pred ccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHh--HHhhcCCHHHHHHHHHHHHHHHH
Q psy3132 26 LSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTPKERGIVLKRWLKELE 101 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~ 101 (507)
.+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|+
T Consensus 29 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~ 108 (520)
T 3ed6_A 29 KHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQETAETRGKKVRAIADKIK 108 (520)
T ss_dssp GGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHHH
T ss_pred cccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHH
Confidence 3446689999999985433 9999999999999999999999999999999999 89999999999999999999999
Q ss_pred hcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 102 GNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 102 ~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+++++|++++++|+|||..+++.|+..+++.+++++.+++++.+...+....+...+++++|+|||++|+|||||+.+.+
T Consensus 109 ~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 109 EHREALARLETLDTGKTLEESYADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 99999999999999999999999999999999999999887766544433246678999999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~---~~~~g~~L~~~p~vd~V~FTGS~~vG~~i 265 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGA---GSEVGDVMSGHKEVDLVSFTGGIETGKHI 265 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSC---CTTHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999985 67899999999999999999999999999
Q ss_pred HHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCC
Q psy3132 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 262 ~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 266 ~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-l~vG~ 344 (520)
T 3ed6_A 266 MKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKK-IKLGN 344 (520)
T ss_dssp HHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTT-CCBCC
T ss_pred HHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHh-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc---CCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
|.+++ +++||++++.+++++.+++++++++|+++++||..... .+|+|++|||+.+++++|++++||+||||++|+
T Consensus 345 p~d~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 423 (520)
T 3ed6_A 345 GFDAD-TEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVE 423 (520)
T ss_dssp TTSTT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CccCC-CcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEE
Confidence 99999 99999999999999999999999999999999986421 269999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 419 KFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 419 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.
T Consensus 424 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~ 503 (520)
T 3ed6_A 424 GFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVS 503 (520)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhce
Confidence 99999999999999999999999999999999999999999999999877778899999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|+++
T Consensus 504 k~v~~~ 509 (520)
T 3ed6_A 504 KHILTN 509 (520)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999875
|
| >3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-108 Score=865.43 Aligned_cols=473 Identities=40% Similarity=0.667 Sum_probs=450.1
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLEDIRDGLKENR 88 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 345689999999986433 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEe-ecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVR-EPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .+...++++ +|+|||++|+|||||+.+.+++
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 167 (506)
T 3rh9_A 89 EEIGRILCMEHGKPWKEAQGEVDYAAGFFDYCAKHISALDSHTIPEK-PKDCTWTVHYRPVGVTGLIVPWNFPIGMIAKK 167 (506)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGGCCEECSCC-GGGCEEEEEEEECCSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC-CCceeeEeecccceEEEEECCCchHHHHHHHH
Confidence 99999999999999999999999999999999999988876544432 456778889 9999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++
T Consensus 168 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~ 244 (506)
T 3rh9_A 168 LSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGK---ASVIGKVLCEHKDVPMLSFTGSTEVGRKLIV 244 (506)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCC---ChHHHHHHHhCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999984 6789999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 245 ~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 323 (506)
T 3rh9_A 245 DTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNK-MTVGDGM 323 (506)
T ss_dssp HTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHH-CCBSCTT
T ss_pred HhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHh-ccCCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||...+..+|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 324 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 402 (506)
T 3rh9_A 324 NDG-IDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTE 402 (506)
T ss_dssp STT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccC-CcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCH
Confidence 999 9999999999999999999999999999999998643225999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 403 deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~ 482 (506)
T 3rh9_A 403 EEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPR 482 (506)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999988777889999999999999999999999999999987
Q ss_pred cc
Q psy3132 504 GN 505 (507)
Q Consensus 504 ~~ 505 (507)
+.
T Consensus 483 ~~ 484 (506)
T 3rh9_A 483 GF 484 (506)
T ss_dssp C-
T ss_pred cC
Confidence 53
|
| >4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-108 Score=864.92 Aligned_cols=472 Identities=31% Similarity=0.533 Sum_probs=450.3
Q ss_pred ccCCcceeECCEeeeCCC-CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 26 LSTYTQAYINGEWVHSSK-KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~-~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.|...++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.
T Consensus 22 ~~~~~~~~I~G~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 101 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEAEEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLKIADAIEKEA 101 (498)
T ss_dssp -CCCCCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred hccccCeeECCEEeeCCCCeEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhH
Confidence 356678999999998766 4999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..++ +.|+..+++.++++++.++++.+...+...++...+++++|+|||++|+|||||+.+.+++
T Consensus 102 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 181 (498)
T 4f3x_A 102 DEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMAWK 181 (498)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHHHH
Confidence 999999999999999999 8999999999999999988766654433234677899999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 182 ~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~---~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~ 257 (498)
T 4f3x_A 182 LAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGR---GETVGNALINHPKVGMVSITGDIATGKKVLA 257 (498)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCC---TTTHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999985 6789999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 258 ~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~ 336 (498)
T 4f3x_A 258 AAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVST-IRYNLDD 336 (498)
T ss_dssp HHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTT-CCCSCSS
T ss_pred HHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHh-cccCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCC-eEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGA-KVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
+++ +++||++++.+++++.+++++++++|+ ++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 337 d~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 337 DTE-NEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSD-EGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp GGG-CSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCS-SSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred ccc-CccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCC-CCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 999 999999999999999999999999999 99999986543 699999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 415 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~ 494 (498)
T 4f3x_A 415 KDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIM 494 (498)
T ss_dssp TSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877789999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 495 ~~ 496 (498)
T 4f3x_A 495 IN 496 (498)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
| >3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-107 Score=860.26 Aligned_cols=474 Identities=32% Similarity=0.578 Sum_probs=448.8
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (497)
T 3k2w_A 10 FKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLRTFANKIRENK 89 (497)
T ss_dssp CCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHH
Confidence 345689999999987543 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.+++++..++++.+...+....+...++.++|+|||++|+|||||+.+.++++
T Consensus 90 ~~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 169 (497)
T 3k2w_A 90 HILAPMLVAEQGKLLSVAEMEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKI 169 (497)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHHHHHHH
Confidence 99999999999999999999999999999999998887766544433456778999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 170 ~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~~~ 246 (497)
T 3k2w_A 170 GPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGT---GSVVGQTLCESPITKMITMTGSTVAGKQIYKT 246 (497)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSC---TTTHHHHHHHCSSEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 56899999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 247 aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vg~p~~ 325 (497)
T 3k2w_A 247 SAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKG-LKVGDPMD 325 (497)
T ss_dssp HTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHT-CCBSCTTS
T ss_pred hhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHh-ccCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCc--ccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK--VTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFK 421 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~ 421 (507)
++ +++||++++.+++++.+++++++++|+++++||.. .+. .+|+|+.|||+.+++++|++++||+||||++|++|+
T Consensus 326 ~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 404 (497)
T 3k2w_A 326 AD-SQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVS 404 (497)
T ss_dssp TT-CSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CC-CccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEeC
Confidence 99 99999999999999999999999999999999973 221 158999999999999999999999999999999999
Q ss_pred CHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 422 TEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 422 ~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|
T Consensus 405 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~v 484 (497)
T 3k2w_A 405 SMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKTV 484 (497)
T ss_dssp CHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999999999999887778999999999999999999999999999999
Q ss_pred Eecc
Q psy3132 502 CFGN 505 (507)
Q Consensus 502 ~~~~ 505 (507)
++++
T Consensus 485 ~~~~ 488 (497)
T 3k2w_A 485 YINE 488 (497)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8864
|
| >2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-107 Score=859.90 Aligned_cols=470 Identities=36% Similarity=0.611 Sum_probs=445.1
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46799999997632 399999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCC---CCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSP---VKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+|++++++|+|||..+++ .|+..+++.++|++++++++.+...+.. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 999999999999999998 8999999999999999887766543321 223367899999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---g~~~g~~L~~~~~v~~V~FTGS~~~G~~I 273 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGS---GSLVGQRLSDHPDVRKIGFTGSTEVGKHI 273 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSC---HHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCC---CHHHHHHHHhCCCCCEEEEECCHHHHHHH
Confidence 999999999999999999999999999999999999999999999984 67889999999999999999999999999
Q ss_pred HHhhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 262 YSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 262 ~~~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 274 ~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~vG 352 (517)
T 2o2p_A 274 MKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEK-MKIG 352 (517)
T ss_dssp HHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTT-CCBS
T ss_pred HHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHh-cCCC
Confidence 99999 999999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++||++++.+++++.+++++++++|+++++||+.... .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 353 dp~~~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~ 430 (517)
T 2o2p_A 353 NPLERD-TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPR-PGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430 (517)
T ss_dssp CTTSTT-CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCCCCC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCC-CCCeECCEEEeCCCCCChhhhccccccEEEEEEc
Confidence 999999 99999999999999999999999999999999986532 5999999999999999999999999999999999
Q ss_pred CC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 421 KT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 421 ~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+| +||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.
T Consensus 431 ~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~ 510 (517)
T 2o2p_A 431 ADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRI 510 (517)
T ss_dssp CTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEE
T ss_pred CCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCc
Confidence 99 9999999999999999999999999999999999999999998766678899999999999999999999999999
Q ss_pred eEEEecc
Q psy3132 499 KYMCFGN 505 (507)
Q Consensus 499 k~v~~~~ 505 (507)
|+|++++
T Consensus 511 k~v~~~~ 517 (517)
T 2o2p_A 511 KTVTFEY 517 (517)
T ss_dssp EEEEEEC
T ss_pred eEEEeeC
Confidence 9998753
|
| >3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-106 Score=853.48 Aligned_cols=472 Identities=49% Similarity=0.879 Sum_probs=449.8
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 87 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQD 87 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999986433 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
+|++++++|+|||..+++.|+..+++.++|++..+.+..+...+....+...+++++|+|||++|+|||||+.+.+++++
T Consensus 88 ~la~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 167 (481)
T 3jz4_A 88 DLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAG 167 (481)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHHHH
Confidence 99999999999999999999999999999999988776655444334567788999999999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 168 ~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 168 PALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGS---AGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBC---THHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 678999999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.++
T Consensus 245 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~ 323 (481)
T 3jz4_A 245 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSK-LHIGDGLDN 323 (481)
T ss_dssp TTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTT-CCBSCTTST
T ss_pred hhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHh-ccCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+ +++||++++.+++++.+++++++++|+++++||...+ .+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 324 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 401 (481)
T 3jz4_A 324 G-VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHE-RGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEAD 401 (481)
T ss_dssp T-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCT-TCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHH
T ss_pred c-CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccC-CCCceeccEEEecCCCCcccccccccCceEEEEEECCHHH
Confidence 9 9999999999999999999999999999999998643 2589999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEecc
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~ 505 (507)
||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|++++
T Consensus 402 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~~ 481 (481)
T 3jz4_A 402 VIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIGL 481 (481)
T ss_dssp HHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEEC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEeC
Confidence 99999999999999999999999999999999999999998777789999999999999999999999999999998764
|
| >4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-107 Score=862.20 Aligned_cols=489 Identities=25% Similarity=0.444 Sum_probs=446.1
Q ss_pred ccCcccchHHhhHHHHHhhhccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhc
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQ 83 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~ 83 (507)
.+|+|+..+ -.|++.+ |...++||||+|+.+..+ ++++||+||+++++++.++.+|+++|+++|++||+.|+.
T Consensus 8 ~~~~~~~~~---~~~~~s~--m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~ 82 (521)
T 4e4g_A 8 SSGVDLGTE---NLYFQSM--MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQPKWAA 82 (521)
T ss_dssp ---------------------CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcCch---hhhHhhh--hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhcc
Confidence 357777655 3444444 445689999999986543 999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeec
Q psy3132 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREP 163 (507)
Q Consensus 84 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 163 (507)
++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++.+.+...+....+...+++++|
T Consensus 83 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P 162 (521)
T 4e4g_A 83 TNPQRRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKGDIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQP 162 (521)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcC
Confidence 99999999999999999999999999999999999999999999999999999998877766543322345678899999
Q ss_pred ccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcC
Q psy3132 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTS 243 (507)
Q Consensus 164 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~ 243 (507)
+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.+.++.|+.|
T Consensus 163 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g----~~~~~~~L~~~ 238 (521)
T 4e4g_A 163 VGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNG----DKGAVDAILTH 238 (521)
T ss_dssp CCEEEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCC----CHHHHHHHHTC
T ss_pred CcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeC----ChHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999997 35667999999
Q ss_pred CCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh-hH
Q psy3132 244 PHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ-VF 322 (507)
Q Consensus 244 ~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 322 (507)
|+||.|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 239 p~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~ 318 (521)
T 4e4g_A 239 PDIAAVSFVGSTPIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETA 318 (521)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHH
T ss_pred CCcCEEEEECCHHHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred HHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc---cCCCceeeceEeecC
Q psy3132 323 DQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT---KLGSKFFAPTILTNI 399 (507)
Q Consensus 323 ~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~---~~~g~~~~Ptvl~~~ 399 (507)
|+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++|+++++||.... ..+|+|++|||+.++
T Consensus 319 d~f~~~l~~~~~~-~~vG~~~~~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v 396 (521)
T 4e4g_A 319 NRLIDKLVPMVES-LRIGPYTDEK-ADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDV 396 (521)
T ss_dssp HHHHHHHHHHHHT-CCBCCTTCTT-CSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESC
T ss_pred HHHHHHHHHHHHh-ccCCCCCCcc-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcC
Confidence 9999999999999 9999999999 9999999999999999999999999999999997531 126999999999999
Q ss_pred CCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCC
Q psy3132 400 TPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGV 478 (507)
Q Consensus 400 ~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~ 478 (507)
+++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++... .+.+||||+
T Consensus 397 ~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~ 476 (521)
T 4e4g_A 397 TPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGW 476 (521)
T ss_dssp CTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCE
T ss_pred CCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987654 477999999
Q ss_pred CCCCCC--CCchHHHHHhchhceEEEecc
Q psy3132 479 KESGLG--REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 479 ~~SG~g--~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|.||+| +++|++|+++||+.|+|++++
T Consensus 477 k~SG~G~~~~~G~~gl~~ft~~K~v~~~~ 505 (521)
T 4e4g_A 477 KSSSFGDLNQHGTDSIKFWTRTKTITSRW 505 (521)
T ss_dssp ETTEESSCCBSHHHHHHHTEEEEEEEECC
T ss_pred ccCCCCCCccchHHHHHHhheEEEEEEec
Confidence 999999 789999999999999998864
|
| >3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-107 Score=860.34 Aligned_cols=472 Identities=34% Similarity=0.584 Sum_probs=449.5
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHh--HHhhcCCHHHHHHHHHHHHHHHHh
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAF--EQWSQTTPKERGIVLKRWLKELEG 102 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~w~~~~~~~R~~~L~~~a~~l~~ 102 (507)
...++||||+|+.+..+ ++++||+| |+++++++.++.+|+++|+++|++|| +.|+.++.++|.++|+++++.|++
T Consensus 21 ~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~ 100 (528)
T 3u4j_A 21 SRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILA 100 (528)
T ss_dssp CBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHH
Confidence 35579999999986543 99999999 99999999999999999999999999 789999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHh
Q psy3132 103 NKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182 (507)
Q Consensus 103 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 182 (507)
++++|++++++|+|||..+++.|+..+++.++++++.++++.+...+....+...++.++|+|||++|+|||||+.+.++
T Consensus 101 ~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 101 RQEELALIESLEVGKPIAQARGEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999999999999999999999998887665444332466789999999999999999999999999
Q ss_pred hHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 183 ~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~ 257 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGY---GDPAGQVLAEDPNVDMVAFTGSVRVGTKLG 257 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCS---STTHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999985 678999999999999999999999999999
Q ss_pred HhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 263 SHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 263 ~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
+.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 258 ~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p 336 (528)
T 3u4j_A 258 EIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRK-VAFGDP 336 (528)
T ss_dssp HHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHH-CCEECT
T ss_pred HHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHh-hcCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||......+|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 337 ~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 415 (528)
T 3u4j_A 337 LNER-TKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415 (528)
T ss_dssp TSTT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCcC-CccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999 999999999999999999999999999999999875322599999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 416 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~ 495 (528)
T 3u4j_A 416 ADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVH 495 (528)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 496 ~~ 497 (528)
T 3u4j_A 496 VT 497 (528)
T ss_dssp EE
T ss_pred Ee
Confidence 75
|
| >3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-106 Score=855.89 Aligned_cols=473 Identities=35% Similarity=0.604 Sum_probs=448.0
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-----HhhcCCHHHHHHHHHHHHHH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-----QWSQTTPKERGIVLKRWLKE 99 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-----~w~~~~~~~R~~~L~~~a~~ 99 (507)
+...++||||+|+.+... ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 345689999999976543 99999999999999999999999999999999999 99999999999999999999
Q ss_pred HHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc-c--CCCCCceeEEEeecccEEEEEcCCccc
Q psy3132 100 LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-P--SPVKSKELLMVREPLGVVGLITPWNFP 176 (507)
Q Consensus 100 l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P 176 (507)
|++++++|++++++|+|||..+++.|+..+++.+++++.+++++.+... + ....+...++.++|+|||++|+|||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 9999999999999999999999999999999999999999887655331 1 112356789999999999999999999
Q ss_pred HHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHH
Q psy3132 177 MAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQ 256 (507)
Q Consensus 177 ~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~ 256 (507)
+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~~~v~~I~FTGS~~ 241 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGL---GPEAGAPLATHPDVDKVAFTGSSA 241 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---HHHHTHHHHTCTTCCEEEEESCHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCC---cHHHHHHHhhCCCccEEEEECcHH
Confidence 99999999999999999999999999999999999999999999999999984 678899999999999999999999
Q ss_pred HHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhc
Q psy3132 257 VGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKS 336 (507)
Q Consensus 257 ~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 336 (507)
+|+.|++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++
T Consensus 242 ~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~- 320 (503)
T 3iwj_A 242 TGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKN- 320 (503)
T ss_dssp HHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHh-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccE
Q psy3132 337 FIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVA 415 (507)
Q Consensus 337 ~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl 415 (507)
+++|+|.+++ +++||++++.+++++.+++++++++|+++++||...+. .+|+|++|||+.+++++|++++||+||||+
T Consensus 321 ~~~g~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 399 (503)
T 3iwj_A 321 IKISDPLEEG-CRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVL 399 (503)
T ss_dssp CCBSCTTSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEE
T ss_pred ccCCCCCCCC-CcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceE
Confidence 9999999999 99999999999999999999999999999999986531 269999999999999999999999999999
Q ss_pred EeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhc
Q psy3132 416 VCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEF 495 (507)
Q Consensus 416 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~ 495 (507)
+|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++|
T Consensus 400 ~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f 479 (503)
T 3iwj_A 400 CVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNY 479 (503)
T ss_dssp EEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTT
T ss_pred EEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999776778899999999999999999999999
Q ss_pred hhceEEEec
Q psy3132 496 TQIKYMCFG 504 (507)
Q Consensus 496 t~~k~v~~~ 504 (507)
|+.|+|+++
T Consensus 480 ~~~k~v~~~ 488 (503)
T 3iwj_A 480 LSVKQVTQY 488 (503)
T ss_dssp EEEEEEEEE
T ss_pred hCeEEEEEe
Confidence 999999875
|
| >3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-106 Score=859.11 Aligned_cols=490 Identities=28% Similarity=0.461 Sum_probs=459.2
Q ss_pred cCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
-+.|++....++.+.+.+.++ ...++||||+|+.++..++++||+| |+++++++.++.+|+++|+++|++||+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~~ 89 (538)
T 3qan_A 10 PFTDFTVEANRKAFEEALGLVEKELGKEYPLIINGERVTTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQT 89 (538)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHHHTTEEECEEETTEEECCSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcHHHHHHHHHHHHhhhccCcccceeECCEEecCCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHHh
Confidence 467777777777777766553 2557999999998444499999999 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHH-HHHhcCccccCCCCCceeEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEE-ARRTYGELVPSPVKSKELLM 159 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~ 159 (507)
|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++. .+...+...+. ..+...++
T Consensus 90 w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~~~~~~~~-~~~~~~~~ 168 (538)
T 3qan_A 90 WRNVNPEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADADTAEAIDFLEYYARQMIELNRGKEILS-RPGEQNRY 168 (538)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCBCCCC-CTTEEEEE
T ss_pred hccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-cCCcceee
Confidence 99999999999999999999999999999999999999999999999999999999998 66666654442 23667899
Q ss_pred EeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHh
Q psy3132 160 VREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKL 239 (507)
Q Consensus 160 ~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~ 239 (507)
.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.
T Consensus 169 ~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~ 245 (538)
T 3qan_A 169 FYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGS---GAEVGDY 245 (538)
T ss_dssp EEEECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBC---TTTTHHH
T ss_pred ecCCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecC---CHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999985 6788999
Q ss_pred hhcCCCccEEEEeCCHHHHHHHHHhhccc------ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCc
Q psy3132 240 LCTSPHVAGISFTGSTQVGKILYSHCSQG------IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAAN 313 (507)
Q Consensus 240 L~~~~~v~~v~ftGs~~~g~~i~~~~~~~------~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~ 313 (507)
|+.||+||.|+||||+.+|+.|++.++++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus 246 L~~~p~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~ 325 (538)
T 3qan_A 246 LVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGS 325 (538)
T ss_dssp HHHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCC
T ss_pred HHhCCCcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCc
Confidence 99999999999999999999999999988 999999999999999999999999999999999999999999999
Q ss_pred ceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeec
Q psy3132 314 RFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAP 393 (507)
Q Consensus 314 ~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~P 393 (507)
|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+++++++++| ++++||..++. .|+|++|
T Consensus 326 rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~-~g~~~~P 401 (538)
T 3qan_A 326 RAVIHKDVYDEVLEKTVALAKN-LTVGDPTNRD-NYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSS-TGFFIQP 401 (538)
T ss_dssp EEEEETTTHHHHHHHHHHHHTT-CCBSCTTSTT-CSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECS-SSCEECC
T ss_pred eeEEehHHHHHHHHHHHHHHHh-ccCCCCCCCC-CCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCC-CCceeCC
Confidence 9999999999999999999999 9999999999 99999999999999999999999999 99999987543 5999999
Q ss_pred eEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEc-CCCCC-CC
Q psy3132 394 TILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGIN-EGIIS-HT 471 (507)
Q Consensus 394 tvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN-~~~~~-~~ 471 (507)
||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+|| ..... .+
T Consensus 402 Tvl~~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~ 481 (538)
T 3qan_A 402 TIIADLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVG 481 (538)
T ss_dssp EEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTT
T ss_pred eeeecCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 55443 78
Q ss_pred CCcccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 472 EAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 472 ~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
.+||||+|.||+| +++|++||++||+.|+|+++
T Consensus 482 ~~PfGG~k~SG~G~~~~G~~gl~~ft~~k~v~~~ 515 (538)
T 3qan_A 482 YHPFGGFKMSGTDSKAGGPDYLALHMQAKTVSEM 515 (538)
T ss_dssp TSCBCCEETTBSCCCBTSTTTGGGGEEEEEEEEE
T ss_pred CCCcCCcCcCCCCcccccHHHHHHhhCeEEEEEe
Confidence 8999999999999 99999999999999999875
|
| >3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-106 Score=851.98 Aligned_cols=465 Identities=32% Similarity=0.550 Sum_probs=441.9
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 89 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYAWADLLEERKE 89 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999987543 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCC-C----CceeEEEeecccEEEEEcCCcccHHhH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPV-K----SKELLMVREPLGVVGLITPWNFPMAMI 180 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 180 (507)
+|++++++|+|||..+++.|+..+++.++++++.++++.+...+... + +...+++++|+|||++|+|||||+.+.
T Consensus 90 ela~~~~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~ 169 (505)
T 3prl_A 90 IIGELIMHEVAKPKKSAIGEVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLA 169 (505)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHHHH
Confidence 99999999999999999999999999999999998887664433221 2 456789999999999999999999999
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.
T Consensus 170 ~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 170 AAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGR---GSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCC---CHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999974 6789999999999999999999999999
Q ss_pred HHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 261 LYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 261 i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 247 i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g 323 (505)
T 3prl_A 247 ISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQ-LTVG 323 (505)
T ss_dssp HHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHH-CCBS
T ss_pred HHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHh-cccC
Confidence 999988 9999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|. ++ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~p~-~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~----~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 397 (505)
T 3prl_A 324 SPE-DD-ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR----QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRV 397 (505)
T ss_dssp CTT-TT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEE
T ss_pred CCC-Cc-CcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCceeCCeEeecCCCCChhhcCCccCcEEEEEEe
Confidence 999 88 99999999999999999999999999999999974 4899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|
T Consensus 398 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k 477 (505)
T 3prl_A 398 KDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRER 477 (505)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceE
Confidence 999999999999999999999999999999999999999999999876 4678999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 478 ~v~~~ 482 (505)
T 3prl_A 478 VTVLN 482 (505)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
| >1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-106 Score=852.70 Aligned_cols=470 Identities=35% Similarity=0.580 Sum_probs=445.8
Q ss_pred CCcceeECCEeeeCC--CC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 28 TYTQAYINGEWVHSS--KK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~--~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
...++||||+|+.+. .. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 97 (503)
T 1a4s_A 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHH
Confidence 345789999999753 45 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.++|++++++++.+...+.. ++...++.++|+|||++|+|||||+.+.++++
T Consensus 98 ~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 176 (503)
T 1a4s_A 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEECG-GGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCceeEEEEecCceEEEECCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999888765443322 34567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ + ++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 177 a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~---~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 252 (503)
T 1a4s_A 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGG---A-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCS---H-HHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecC---c-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999974 6 889999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 253 aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~ 331 (503)
T 1a4s_A 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA-IVVGDPLL 331 (503)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTS
T ss_pred hhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHh-cCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc--cc---CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV--TK---LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
++ +++||++++.+++++.+++++++++|+++++||+.. +. ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 332 ~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 410 (503)
T 1a4s_A 332 TE-TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410 (503)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEe
Confidence 99 999999999999999999999999999999999764 11 2589999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 411 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 490 (503)
T 1a4s_A 411 FDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490 (503)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEE
T ss_pred cCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCce
Confidence 99999999999999999999999999999999999999999999997777788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 491 ~v~~~ 495 (503)
T 1a4s_A 491 TVIVE 495 (503)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
|
| >3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-106 Score=847.78 Aligned_cols=466 Identities=33% Similarity=0.575 Sum_probs=438.1
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.+++++|.++|+++++.|+++.++
T Consensus 25 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 104 (497)
T 3i44_A 25 KRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQTWKTTSPHERLGFVEKILEIYEKRSSD 104 (497)
T ss_dssp ECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5679999999986543 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE-eecccEEEEEcCCcccHHhHHhhH
Q psy3132 107 LAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV-REPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
|++++++|+|||..+++ .|+..+++.++++++........... ..+...+++ ++|+|||++|+|||||+.+.++++
T Consensus 105 la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 182 (497)
T 3i44_A 105 MAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL--IEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKV 182 (497)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES--STTCSSCEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--cCCceeEEEeecCceEEEEECCCcchHHHHHHHH
Confidence 99999999999999999 89999999999999877654332211 124456777 999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 183 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~---~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~ 259 (497)
T 3i44_A 183 IPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGD---GANVGSYLSAHPDLEMISFTGSTRAGKDISKN 259 (497)
T ss_dssp HHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCC---ChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999985 67899999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 260 aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~vG~p~~ 337 (497)
T 3i44_A 260 ASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEK-TQVGPGHQ 337 (497)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHH-CCBCCTTS
T ss_pred HhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHh-ccCCCCCC
Confidence 9999999999999999999999999 999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCC-cccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG-KVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
++ +++||++++.+++++.++|++++++|+++++||. .... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 338 ~~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 338 TG-NHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp CS-SCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CC-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 99 9999999999999999999999999999999994 3221 2599999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||. ....+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 417 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 417 EDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 9999999999999999999999999999999999999999994 445678999999999999999999999999999985
Q ss_pred e
Q psy3132 503 F 503 (507)
Q Consensus 503 ~ 503 (507)
.
T Consensus 496 ~ 496 (497)
T 3i44_A 496 Y 496 (497)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-105 Score=850.04 Aligned_cols=470 Identities=34% Similarity=0.565 Sum_probs=445.2
Q ss_pred CcceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999997643 2 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 107 LAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
|++++++|+|||..+++.|+..+++.++++++++++..+...+....+...+++++|+|||++|+|||||+.+.++++++
T Consensus 106 la~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 185 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVRAQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAP 185 (515)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhhH
Confidence 99999999999999999999999999999999888876654443234556789999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 186 ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa 262 (515)
T 2d4e_A 186 ALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGF---GEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262 (515)
T ss_dssp HHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCC---chHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999984 5678999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 263 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~~ 341 (515)
T 2d4e_A 263 DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARA-IRVGHPLDPE 341 (515)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHH-CCBCCTTSTT
T ss_pred hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhh-cccCCccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-------CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-------LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
+++||++++.+++++.++|++++++|+++++||+.... ..|+|++|||+.+ +++|++++||+||||++|++
T Consensus 342 -~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~ 419 (515)
T 2d4e_A 342 -TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIP 419 (515)
T ss_dssp -CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEE
T ss_pred -CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEe
Confidence 99999999999999999999999999999999976430 1489999999999 99999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|
T Consensus 420 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K 499 (515)
T 2d4e_A 420 FKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLK 499 (515)
T ss_dssp ESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEE
T ss_pred eCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCcee
Confidence 99999999999999999999999999999999999999999999987766788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 500 ~v~~~ 504 (515)
T 2d4e_A 500 TIALP 504 (515)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99875
|
| >1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-105 Score=846.98 Aligned_cols=468 Identities=36% Similarity=0.597 Sum_probs=444.0
Q ss_pred cceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 30 TQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 30 ~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
.++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 36799999997643 3 99999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..++. .|+..+++.++++++.++++.+...+. ..+...+++++|+|||++|+|||||+.+.+++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWK 179 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec-cCCcceeEEecCCceEEEECCCcchHHHHHHH
Confidence 9999999999999999874 799999999999999988876654332 23556789999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~---~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~ 256 (501)
T 1bxs_A 180 IGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256 (501)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHTCTTCSEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecC---chHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 5678999999999999999999999999999
Q ss_pred hhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCC
Q psy3132 264 HCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDT 342 (507)
Q Consensus 264 ~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~ 342 (507)
.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|
T Consensus 257 ~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p 335 (501)
T 1bxs_A 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKK-YVLGNP 335 (501)
T ss_dssp HHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTC-CCBSCT
T ss_pred HhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHh-cCCCCC
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 343 SKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 343 ~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
.+++ +++||++++.+++++.+++++++++|+++++||+..+. .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 ~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (501)
T 1bxs_A 336 LTPG-VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKS 413 (501)
T ss_dssp TSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS-SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cccC-CccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCC
Confidence 9999 99999999999999999999999999999999986432 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|.
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~ 493 (501)
T 1bxs_A 414 LDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVT 493 (501)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEE
Confidence 99999999999999999999999999999999999999999987766678999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 494 ~~ 495 (501)
T 1bxs_A 494 IK 495 (501)
T ss_dssp EE
T ss_pred Ec
Confidence 75
|
| >2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-106 Score=845.78 Aligned_cols=469 Identities=33% Similarity=0.579 Sum_probs=444.7
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 7 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (479)
T 2imp_A 7 HPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLRKISAGIRERASEI 86 (479)
T ss_dssp CCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46899999997543 2999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++++|
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 166 (479)
T 2imp_A 87 SALIVEEGGKIQQLAEVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPA 166 (479)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999988877666543332235577899999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|++||+||+|||+.+|+++..|+++|.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|++.+++
T Consensus 167 LaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~ 243 (479)
T 2imp_A 167 LLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGR---GETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAK 243 (479)
T ss_dssp HHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHHT
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999984 56789999999999999999999999999999999
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC-CC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK-ND 346 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~-~~ 346 (507)
++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+ ++
T Consensus 244 ~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~~ 322 (479)
T 2imp_A 244 NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQA-VQFGNPAERND 322 (479)
T ss_dssp TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTTCSS
T ss_pred cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHh-cccCCccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999999 88
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEES 426 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ea 426 (507)
+++|||+++.+++++.+++++++++|+++++||+..+. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 323 -~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eA 400 (479)
T 2imp_A 323 -IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEG-KGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDA 400 (479)
T ss_dssp -CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCS-SSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHH
T ss_pred -CccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHH
Confidence 99999999999999999999999999999999976322 5899999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 427 LCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 427 i~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|+++
T Consensus 401 i~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 401 ISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 999999999999999999999999999999999999998776678899999999999999999999999999999864
|
| >3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-106 Score=854.12 Aligned_cols=467 Identities=36% Similarity=0.568 Sum_probs=443.5
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 13 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 92 (517)
T 3r31_A 13 PKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQKEWAAMSPMARGRILKRAADIMRERND 92 (517)
T ss_dssp CSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 45689999999976543 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHH----hcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR----TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMIT 181 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 181 (507)
+|++++++|+|||..++ |+..+++.++++++++++ +.+...+. ..+. .+++++|+|||++|+|||||+.+.+
T Consensus 93 ela~~~~~e~Gk~~~ea--ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~-~~~~-~~~~~~P~GVV~~I~PwN~P~~~~~ 168 (517)
T 3r31_A 93 ALSTLETLDTGKPIQET--IVADPTSGADAFEFFGGIAPSALNGDYIPL-GGDF-AYTKRVPLGVCVGIGAWNYPQQIAC 168 (517)
T ss_dssp HHHHHHHHHHCCCHHHH--HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC-SSSE-EEEEEEECSEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHhCCCHHHH--HHHHHHHHHHHHHHHhhhccccccCccccc-CCCc-ceEEEcCccEEEEECCCcchHHHHH
Confidence 99999999999999999 999999999999999887 66654442 2345 8999999999999999999999999
Q ss_pred hhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHH
Q psy3132 182 RKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKIL 261 (507)
Q Consensus 182 ~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i 261 (507)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|
T Consensus 169 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g----~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 169 WKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG----DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC----CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC----CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999997 46789999999999999999999999999
Q ss_pred HHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCC
Q psy3132 262 YSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGD 341 (507)
Q Consensus 262 ~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~ 341 (507)
++.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+
T Consensus 245 ~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~ 323 (517)
T 3r31_A 245 AAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEA-MILGD 323 (517)
T ss_dssp HHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHH-CCBCC
T ss_pred HHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHh-ccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred CCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 342 TSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 342 ~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
|.+++ +++||++++.+++++.++|++++++|+++++||...+. .+|+|+.|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYA-THLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTT-CSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcC-CcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999 99999999999999999999999999999999931211 2599999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+.+||||+|.||+|+++|++|+++||+.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998777789999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 483 ~v~~~ 487 (517)
T 3r31_A 483 TVYVS 487 (517)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99875
|
| >1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-106 Score=846.68 Aligned_cols=470 Identities=37% Similarity=0.597 Sum_probs=443.9
Q ss_pred cCCcceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 27 STYTQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (495)
T 1wnd_A 21 LMQHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQ 100 (495)
T ss_dssp -CCCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred ccccCeEECCEEecCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence 344578999999976434 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhH-hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESLG-EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++. |+..+++.++++++.++++.+...+...++...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (495)
T 1wnd_A 101 VFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKL 180 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHHH
Confidence 9999999999999999998 999999999999998877665443322234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~ 256 (495)
T 1wnd_A 181 APALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHPKVRMVSLTGSIATGEHIISH 256 (495)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCC---TTTTHHHHHTCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCC---CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHH
Confidence 99999999999999999999999999999999 999999999984 56789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 257 aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~ 335 (495)
T 1wnd_A 257 TASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT-LKSGAPDD 335 (495)
T ss_dssp HGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHT-CCBCCTTS
T ss_pred HHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHh-ccCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCC-CeEEeCCC-ccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCC
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKG-AKVILGGG-KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~ 422 (507)
++ +++|||+++.+++++.+++++++++| +++++||. .++ .|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 336 ~~-~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (495)
T 1wnd_A 336 ES-TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKG--NGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDN 412 (495)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSS--SSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CC-CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCC--CCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999 99999997 532 589999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 423 ~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 413 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~ 492 (495)
T 1wnd_A 413 EEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 492 (495)
T ss_dssp HHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEE
Confidence 99999999999999999999999999999999999999999987666788999999999999999999999999999997
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 493 ~~ 494 (495)
T 1wnd_A 493 VK 494 (495)
T ss_dssp EE
T ss_pred ec
Confidence 63
|
| >1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-106 Score=848.10 Aligned_cols=467 Identities=35% Similarity=0.556 Sum_probs=443.2
Q ss_pred ceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 31 QAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 31 ~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5799999997643 3 99999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..++. .|+..+++.++|+++.++++.+...+. ..+...+++++|+|||++|+|||||+.+.++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceec-CCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 999999999999999875 699999999999999887766654332 234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 256 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGRVIQVA 256 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBC---TTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecC---cHHHHHHHHhCCCcCEEEEECCHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999985 56789999999999999999999999999999
Q ss_pred hc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 257 aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 335 (500)
T 1o04_A 257 AGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS-RVVGNPF 335 (500)
T ss_dssp HHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH-CCBCCTT
T ss_pred hhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHh-CcCCCcc
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 336 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 413 (500)
T 1o04_A 336 DSK-TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD-RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTI 413 (500)
T ss_dssp STT-CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS-SSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCH
T ss_pred ccc-CccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCC-CCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCH
Confidence 999 99999999999999999999999999999999976432 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|+|++
T Consensus 414 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~ 493 (500)
T 1o04_A 414 EEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTV 493 (500)
T ss_dssp HHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEE
T ss_pred HHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEE
Confidence 99999999999999999999999999999999999999999877666789999999999999999999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 494 ~ 494 (500)
T 1o04_A 494 K 494 (500)
T ss_dssp E
T ss_pred e
Confidence 5
|
| >3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-105 Score=845.78 Aligned_cols=467 Identities=33% Similarity=0.573 Sum_probs=442.9
Q ss_pred cceeECCEeeeCCC--CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH--HhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 30 TQAYINGEWVHSSK--KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE--QWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 30 ~~~~I~G~~~~~~~--~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
.++||||+|+.+.. .++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++++
T Consensus 9 ~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (495)
T 3b4w_A 9 DKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAERKD 88 (495)
T ss_dssp SSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 36899999997643 399999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++ .|+..+++.++++++.++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (495)
T 3b4w_A 89 LFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRT-GSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKI 167 (495)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEE-ETTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccC-CCCceEEEEEccCceEEEECCCcchHHHHHHHH
Confidence 999999999999999998 899999999999999888776654332 123467899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g----~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~ 243 (495)
T 3b4w_A 168 APALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG----GIETGQALTSNPDIDMFTFTGSSAVGREVGRR 243 (495)
T ss_dssp HHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB----SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC----CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999996 46789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 244 aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~ 322 (495)
T 3b4w_A 244 AAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTA-LPVGPPSD 322 (495)
T ss_dssp HHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHH-SCBCCTTC
T ss_pred hhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHh-cCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
++ +++||++++.+++++.+++++++++|+++++||+.... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 323 ~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 401 (495)
T 3b4w_A 323 PA-AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTE 401 (495)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred CC-CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCH
Confidence 99 99999999999999999999999999999999976431 14899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++. ..+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 402 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~ 480 (495)
T 3b4w_A 402 EDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLL 480 (495)
T ss_dssp HHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEC
T ss_pred HHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEE
Confidence 99999999999999999999999999999999999999999877 67889999999999999999999999999999987
Q ss_pred c
Q psy3132 504 G 504 (507)
Q Consensus 504 ~ 504 (507)
+
T Consensus 481 ~ 481 (495)
T 3b4w_A 481 P 481 (495)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-105 Score=840.29 Aligned_cols=457 Identities=33% Similarity=0.585 Sum_probs=431.6
Q ss_pred eeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHH
Q psy3132 32 AYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIM 111 (507)
Q Consensus 32 ~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~ 111 (507)
+||||+|+.+++ ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++
T Consensus 2 ~~I~G~~~~~~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~ 80 (486)
T 3pqa_A 2 MFIDGKWINRED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQIKEKKEELAKIL 80 (486)
T ss_dssp -------CCCCC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred eeECCEEecCCC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999998766 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcC
Q psy3132 112 TQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAG 191 (507)
Q Consensus 112 ~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaG 191 (507)
++|+|||..+++.|+..+++.++++++.++++.+...+. .+...++.++|+|||++|+|||||+.+.++++++||++|
T Consensus 81 ~~e~Gk~~~ea~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaG 158 (486)
T 3pqa_A 81 AIDAGKPIKQARVEVERSIGTFKLAAFYVKEHRDEVIPS--DDRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPAIATG 158 (486)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC--TTEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCceecC--CCceeEEEEccccEEEEECCCchHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999998876654442 256789999999999999999999999999999999999
Q ss_pred CeEEeccCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcc
Q psy3132 192 CTCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267 (507)
Q Consensus 192 N~Vvlkps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~ 267 (507)
|+||+|||+.+|+++.++++++.++ |+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 159 N~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~---~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa- 234 (486)
T 3pqa_A 159 NVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGA---GEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG- 234 (486)
T ss_dssp CEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSC---TTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC-
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC---chHHHHHHHhCCCccEEEEECChHHHHHHHHHcC-
Confidence 9999999999999999999999999 9999999999985 5678999999999999999999999999999887
Q ss_pred cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCC
Q psy3132 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDK 347 (507)
Q Consensus 268 ~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~ 347 (507)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++
T Consensus 235 -~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~~- 311 (486)
T 3pqa_A 235 -FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKV-LNVGNPLDEK- 311 (486)
T ss_dssp -SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT-
T ss_pred -CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHh-cccCCCCcCC-
Confidence 8999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHH
Q psy3132 348 CNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL 427 (507)
Q Consensus 348 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 427 (507)
+++||++++.+++++.+++++++.+|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi 385 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR----DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMI 385 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC----CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHH
Confidence 99999999999999999999999999999999975 4899999999 9999999999999999999999999 9999
Q ss_pred HHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 428 CVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 428 ~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+++|+++|||++||||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 386 ~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~ 463 (486)
T 3pqa_A 386 DIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIIS 463 (486)
T ss_dssp HHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEE
T ss_pred HHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEc
Confidence 99999999999999999999999999999999999999865 345899999999999999999999999999999875
|
| >2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-105 Score=842.14 Aligned_cols=471 Identities=52% Similarity=0.929 Sum_probs=446.2
Q ss_pred CcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 29 YTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
..++||||+|+.+...++++||+||+++++++.++.+|++.|+++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 12 ~~~~~i~g~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 91 (487)
T 2w8n_A 12 RTDSFVGGRWLPAAATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCRWREVSAKERSSLLRKWYNLMIQNKDDLA 91 (487)
T ss_dssp CCSEEETTEEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred ccCeeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35789999999766349999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++++++.+++..+...+....+...+++++|+|||++|+|||||+.+.++++++||
T Consensus 92 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 171 (487)
T 2w8n_A 92 RIITAESGKPLKEAHGEILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAAL 171 (487)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999998887665444323456778999999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVT---SSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~---g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |+ +.++++.|++||+||.|+||||+.+|+.|++.+
T Consensus 172 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 248 (487)
T 2w8n_A 172 AAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKN---AKEVGEAICTDPLVSKISFTGSTTTGKILLHHA 248 (487)
T ss_dssp HHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHH---HHHHHHHHTTCTTEEEEEEEECHHHHHHHHHHH
T ss_pred HcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCC---cHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 74 567899999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++.+++|+|.++
T Consensus 249 a~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~ 328 (487)
T 2w8n_A 249 ANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEE 328 (487)
T ss_dssp HTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTST
T ss_pred hccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998753689999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCc-eeeceEeecCCCCCCCcccceeeccEEeEecCCHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK-FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 424 (507)
+ +++||++++.+++++.+++++++++|+++++||+... .|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 329 ~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~--~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 329 G-TTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ--LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp T-CCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCT--TCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred c-CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCC--CCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 9 9999999999999999999999999999999998643 488 99999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 425 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999877667899999999999999999999999999999876
Q ss_pred c
Q psy3132 505 N 505 (507)
Q Consensus 505 ~ 505 (507)
.
T Consensus 486 ~ 486 (487)
T 2w8n_A 486 G 486 (487)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-104 Score=835.77 Aligned_cols=452 Identities=28% Similarity=0.463 Sum_probs=434.6
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ 124 (507)
++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.
T Consensus 6 ~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ 85 (484)
T 3ros_A 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESKE 85 (484)
T ss_dssp CEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH
T ss_pred cceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChH
Q psy3132 125 EVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204 (507)
Q Consensus 125 ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~ 204 (507)
|+..+++.++++++.++++.+...+.. .+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+
T Consensus 86 ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ 164 (484)
T 3ros_A 86 EVELCVSICNYYADHGPEMLKPTKLNS-DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPG 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCEEECC-TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeccC-CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChH
Confidence 999999999999999988776544322 4568899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 205 ~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++.+|++++.++|+|+|++|+|+|+ +.++++ |+.||+||.|+||||+.+|+.|++.+++++||+++|||||||+||
T Consensus 165 t~~~l~~l~~~aGlP~gvv~vv~g~---~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV 240 (484)
T 3ros_A 165 SAALTAKIIKRAGAPEGSLINLYPS---YDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAFIV 240 (484)
T ss_dssp HHHHHHHHHHHHTCCTTSEEEECCC---HHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEEEE
T ss_pred HHHHHHHHHHHhCcCcCeEEEEeCC---hHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCccee
Confidence 9999999999999999999999984 567788 999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDS 364 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~ 364 (507)
++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++.+
T Consensus 241 ~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~rv~~ 318 (484)
T 3ros_A 241 LDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSN-LKAGDPLEAD-TTLPPMNSEKAKEKLEA 318 (484)
T ss_dssp CTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTSTT-CCBCCCSCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCCC-CccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999 99999999999999999
Q ss_pred HHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC
Q psy3132 365 IVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444 (507)
Q Consensus 365 ~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~ 444 (507)
+|++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 319 ~i~~a~~~Ga~v~~gG~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~ 397 (484)
T 3ros_A 319 QVKEAIDAGAKVFYQYPEIDS-KGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397 (484)
T ss_dssp HHHHHHHTTCEEEEECCCCCC-SSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECS
T ss_pred HHHHHHHcCCeEEecCCcCCC-CCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECC
Confidence 999999999999999986432 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 445 DISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 445 d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 398 d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~ 457 (484)
T 3ros_A 398 DIDRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDV 457 (484)
T ss_dssp CHHHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEEC
T ss_pred CHHHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEEC
Confidence 999999999999999999999777778999999999999999999999999999999875
|
| >3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-104 Score=840.20 Aligned_cols=468 Identities=32% Similarity=0.529 Sum_probs=428.6
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
+...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAAELLEEHR 89 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhH
Confidence 456689999999976433 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++|++++++|+|||..+++.|+..+++.++++++.+++..+ ..+.. .++...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (508)
T 3r64_A 90 EEIVEWLIKESGSTRSKANLEITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRS 168 (508)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHHHHH
Confidence 99999999999999999999999999999999988776555 33322 24577899999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 262 (507)
+++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|+ +.++++.|++||+||.|+||||+.+|+.|+
T Consensus 169 ~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 169 VAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGA---GSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCC---TTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCC---CHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999984 578899999999999999999999999999
Q ss_pred Hhhcc--cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccC
Q psy3132 263 SHCSQ--GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQG 340 (507)
Q Consensus 263 ~~~~~--~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g 340 (507)
+.+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|
T Consensus 246 ~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G 324 (508)
T 3r64_A 246 ELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKN-IPTG 324 (508)
T ss_dssp HHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHT-CCBS
T ss_pred HHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHh-ccCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999 9999
Q ss_pred CCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEec
Q psy3132 341 DTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 341 ~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+|.+++ +++||++++.+++++++++++++++|+++++||.. +|+|+.|||+.+++++|++++||+||||++|++|
T Consensus 325 ~p~~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~----~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 399 (508)
T 3r64_A 325 DPSAEG-TLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI----EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKA 399 (508)
T ss_dssp CTTSSS-CCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE----ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEE
T ss_pred CCccCC-CcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC----CCcEEecEEEecCCCCChhhcccccCceEEEEEe
Confidence 999999 99999999999999999999999999999999975 4899999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|
T Consensus 400 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k 479 (508)
T 3r64_A 400 DDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDR 479 (508)
T ss_dssp SSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEE
T ss_pred CCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceE
Confidence 9999999999999999999999999999999999999999999998754 678999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 480 ~v~~~ 484 (508)
T 3r64_A 480 WIGIK 484 (508)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99875
|
| >1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-104 Score=834.82 Aligned_cols=464 Identities=32% Similarity=0.539 Sum_probs=439.9
Q ss_pred cceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHH
Q psy3132 30 TQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAE 109 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~ 109 (507)
.++||||+|+.+...++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++
T Consensus 5 ~~~~i~g~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~ 84 (475)
T 1euh_A 5 YKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIGA 84 (475)
T ss_dssp CCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred cceeECCEEecCCCceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 37899999997654689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCC----cee-EEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 110 IMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKS----KEL-LMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 110 ~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++++|+|||..+++.|+..+++.++++++.++++.+...+...++ ... ++.++|+|||++|+|||||+.+.++++
T Consensus 85 ~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (475)
T 1euh_A 85 ILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKI 164 (475)
T ss_dssp HHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHHHHHHHH
Confidence 999999999999999999999999999998877655433322234 456 899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.++++.|+.||++|.|+||||+.+|+.|++.
T Consensus 165 ~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 241 (475)
T 1euh_A 165 APALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGERIGKM 241 (475)
T ss_dssp HHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCC---cHHHHHHHHhCCCcCEEEEECchHHHHHHHHh
Confidence 999999999999999999999999999999999999999999974 56789999999999999999999999999998
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+
T Consensus 242 aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~ 318 (475)
T 1euh_A 242 AG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLA-LTIGNPED 318 (475)
T ss_dssp TT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHT-SCBSCGGG
T ss_pred cC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHh-ccCCCccc
Confidence 87 8999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHH
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEE 424 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~ 424 (507)
+ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 319 -~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~----~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~ 392 (475)
T 1euh_A 319 -D-ADITPLIDTKSADYVEGLINDANDKGATALTEIKR----EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVE 392 (475)
T ss_dssp -T-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE----ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCHH
T ss_pred -c-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCHH
Confidence 7 99999999999999999999999999999999975 38999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcC-CCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 425 ESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINE-GIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 425 eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~-~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
|||+++|+++|||++||||+|.+.++++++++++|+|+||+ +....+.+||||+|.||+|+++|++|+++||+.|+|++
T Consensus 393 eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~~ 472 (475)
T 1euh_A 393 EAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF 472 (475)
T ss_dssp HHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEEE
T ss_pred HHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEEE
Confidence 99999999999999999999999999999999999999998 66566889999999999999999999999999999987
Q ss_pred cc
Q psy3132 504 GN 505 (507)
Q Consensus 504 ~~ 505 (507)
++
T Consensus 473 ~~ 474 (475)
T 1euh_A 473 DI 474 (475)
T ss_dssp EC
T ss_pred ec
Confidence 53
|
| >4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-104 Score=837.94 Aligned_cols=469 Identities=30% Similarity=0.502 Sum_probs=423.8
Q ss_pred CCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHH
Q psy3132 28 TYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQ 105 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 105 (507)
...++||||+|+.+.+. ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 84 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQKARGYLHENRD 84 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHH
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999975433 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC-CCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 106 ALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP-VKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 106 ~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
+|++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .++...+++++|+|||++|+|||||+.+.++++
T Consensus 85 ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 164 (485)
T 4dng_A 85 DIIMMIARETGGTIIKSTIELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSI 164 (485)
T ss_dssp HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHHHH
Confidence 9999999999999999999999999999999999887766544422 345778999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 185 APALAAGCTCVIKPAEDTPLTA-LALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~-~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+|+|+ +.++++.|++||++|.|+||||+.+|+.|++
T Consensus 165 ~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~---~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 165 APAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTD---VKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCC---HHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCC---ChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999 99999999999999999999984 5679999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 242 ~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~~~ 320 (485)
T 4dng_A 242 IAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQ-LPYGDQT 320 (485)
T ss_dssp HHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHH-CCBSCTT
T ss_pred HHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHh-ccCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 321 ~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~----~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~ 395 (485)
T 4dng_A 321 DPK-TVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR----VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSD 395 (485)
T ss_dssp STT-CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE----ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSH
T ss_pred cCC-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC----CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCH
Confidence 999 99999999999999999999999999999999975 4899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+|+++|++++++||+.|+|+
T Consensus 396 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~ 475 (485)
T 4dng_A 396 QEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWIS 475 (485)
T ss_dssp HHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEE
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEE
Confidence 9999999999999999999999999999999999999999998754 678999999999999999999999999999998
Q ss_pred ecc
Q psy3132 503 FGN 505 (507)
Q Consensus 503 ~~~ 505 (507)
++.
T Consensus 476 ~~~ 478 (485)
T 4dng_A 476 IQK 478 (485)
T ss_dssp EEC
T ss_pred Eec
Confidence 763
|
| >2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-104 Score=840.09 Aligned_cols=470 Identities=29% Similarity=0.466 Sum_probs=440.6
Q ss_pred CCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 28 TYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
...+.||||+|+.++..++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|
T Consensus 22 ~~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 101 (500)
T 2j6l_A 22 EENEGVYNGSWGGRGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWKIWADIPAPKRGEIVRQIGDALREKIQVL 101 (500)
T ss_dssp SEEECEESSSEECCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCceECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678999999964334999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPA 187 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 187 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+...++...+++++|+|||++|+|||||+.+.++++++|
T Consensus 102 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 181 (500)
T 2j6l_A 102 GSLVSLEMGKILVEGVGEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGWNNAIA 181 (500)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999998877666543332334556788999999999999999999999999999
Q ss_pred hhcCCeEEeccCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 188 LAAGCTCVIKPAEDTPLTALALAALAH----EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 188 LaaGN~Vvlkps~~~~~~~~~l~~~l~----~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
|++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||++|.|+||||+.+|+.|++
T Consensus 182 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g----~~~~g~~L~~~~~vd~I~FTGS~~~g~~i~~ 257 (500)
T 2j6l_A 182 MICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG----GADIGTAMAKDERVNLLSFTGSTQVGKQVGL 257 (500)
T ss_dssp HHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC----SHHHHHHHHHCTTCSEEEEESCHHHHHHHHH
T ss_pred HHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC----CHHHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 999999999999999999999888766 56999999999996 5678999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.+++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 258 ~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~ 336 (500)
T 2j6l_A 258 MVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQ-IRVGNPW 336 (500)
T ss_dssp HHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHT-CCBSCTT
T ss_pred HhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhh-cccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++|||+++.+++++.+++++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 337 ~~~-~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 337 DPN-VLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDR-PGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp STT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSS-SSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cCC-CccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCC-CCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 999 99999999999999999999999999999999986432 5899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHH--hhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVG--KKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKY 500 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~--~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~ 500 (507)
||||+++|+++|||++||||+|.+++++++ .++++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998655 34689999999999999999999999999999
Q ss_pred EEec
Q psy3132 501 MCFG 504 (507)
Q Consensus 501 v~~~ 504 (507)
|+++
T Consensus 495 v~~~ 498 (500)
T 2j6l_A 495 CTIN 498 (500)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9875
|
| >1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-104 Score=839.06 Aligned_cols=491 Identities=27% Similarity=0.434 Sum_probs=450.3
Q ss_pred ccCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHHHhH
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKEAFE 79 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~ 79 (507)
..+.++...+.++.+.+.+..+ ...++||||+|+.++..++++||+ ||+++++++.++.+|+++|+++|++||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~ 88 (516)
T 1uzb_A 9 EPIETFQTEEARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK 88 (516)
T ss_dssp CCCCCCCSHHHHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred cccccccchhhhhhHHHHHHHhhhhhccccceeECCEEecCCCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 3455665555554444444221 134689999999764449999999 6999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeE
Q psy3132 80 QWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELL 158 (507)
Q Consensus 80 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~ 158 (507)
.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.++++.+...+ ...++...+
T Consensus 89 ~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 168 (516)
T 1uzb_A 89 TWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNE 168 (516)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEE
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999988887765422 222355678
Q ss_pred EEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHH
Q psy3132 159 MVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGK 238 (507)
Q Consensus 159 ~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~ 238 (507)
+.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|+ +.++++
T Consensus 169 ~~~~P~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~---~~~~~~ 245 (516)
T 1uzb_A 169 SFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV---GEEVGA 245 (516)
T ss_dssp EEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCS---SSHHHH
T ss_pred EEEeccceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCC---Cchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999984 578899
Q ss_pred hhhcCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccC
Q psy3132 239 LLCTSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAA 312 (507)
Q Consensus 239 ~L~~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~ 312 (507)
.|++||+||.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|+++
T Consensus 246 ~L~~~~~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~ 325 (516)
T 1uzb_A 246 YLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAA 325 (516)
T ss_dssp HHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCE
T ss_pred hhhcCCCcCEEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccC
Confidence 9999999999999999999999999998 7899999999999999999999999999999999999999999999
Q ss_pred cceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceee
Q psy3132 313 NRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFA 392 (507)
Q Consensus 313 ~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~ 392 (507)
+|||||+++||+|+++|++++++ +++|+| +++ +++|||+++.+++++.+++++++++| ++++||.... ..|+|++
T Consensus 326 ~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p-~~~-~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~-~~g~~~~ 400 (516)
T 1uzb_A 326 SRLILTQGAYEPVLERVLKRAER-LSVGPA-EEN-PDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLE-GEGYFIA 400 (516)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHTT-CCBSCG-GGC-CSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCS-SSSCCBC
T ss_pred cEEEEchHHHHHHHHHHHHHHHh-ccCCCC-ccc-cccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCC-CCCcEEC
Confidence 99999999999999999999999 999999 888 99999999999999999999999999 8999997632 2589999
Q ss_pred ceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--C
Q psy3132 393 PTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--H 470 (507)
Q Consensus 393 Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~ 470 (507)
|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .
T Consensus 401 Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~ 480 (516)
T 1uzb_A 401 PTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALV 480 (516)
T ss_dssp CEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCT
T ss_pred CEEEECCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986542 5
Q ss_pred CCCcccCCCCCCCCC-CchHHHHHhchhceEEEec
Q psy3132 471 TEAAFGGVKESGLGR-EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 471 ~~~pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 504 (507)
+.+||||+|.||+|+ ++|++++++||+.|+|+++
T Consensus 481 ~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k~v~~~ 515 (516)
T 1uzb_A 481 GVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAER 515 (516)
T ss_dssp TTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEE
T ss_pred CCCCCCCcCcCCCCCccchHHHHHHcCCeeEEEec
Confidence 679999999999994 7999999999999999764
|
| >1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-104 Score=834.20 Aligned_cols=472 Identities=31% Similarity=0.487 Sum_probs=442.2
Q ss_pred cCCcceeECCEeeeCCC-C-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 27 STYTQAYINGEWVHSSK-K-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~-~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
|...++||||+|+.+.. . ++++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++
T Consensus 3 ~~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 3 IRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp CCBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred CcccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34457899999997643 2 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.+++++...++..+...+....+...+++++|+|||++|+|||||+.+.++++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 162 (486)
T 1t90_A 83 EELAHLITIENGKNTKEALGEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMF 162 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHHH
Confidence 99999999999999999999999999999999887777665543222234567899999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 163 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g----~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~ 238 (486)
T 1t90_A 163 PMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG----AHDVVNGILEHPEIKAISFVGSKPVGEYVYKK 238 (486)
T ss_dssp HHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC----SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC----CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 35789999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcc-eechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR-FLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|++++++ +++|+|.
T Consensus 239 aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~-~~vG~~~ 316 (486)
T 1t90_A 239 GSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD-IKIGNGL 316 (486)
T ss_dssp HHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT-CCBSCTT
T ss_pred HhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh-cccCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999 99999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+++ +++||++++.+++++.+++++++++|+++++||.......|+|+.|||+.+++++|++++||+||||++|++|+|+
T Consensus 317 ~~~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~ 395 (486)
T 1t90_A 317 DDG-VFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNL 395 (486)
T ss_dssp STT-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred ccC-CccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCH
Confidence 999 9999999999999999999999999999999997432125899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCC--CCchHHHHHhchhceE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLG--REGSRHGMEEFTQIKY 500 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g--~~~g~~~l~~~t~~k~ 500 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||++... .+.+||||+|.||+| +++|++|+++||+.|+
T Consensus 396 ~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~ 475 (486)
T 1t90_A 396 KEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKV 475 (486)
T ss_dssp HHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999986443 467999999999999 8999999999999999
Q ss_pred EEecc
Q psy3132 501 MCFGN 505 (507)
Q Consensus 501 v~~~~ 505 (507)
|++++
T Consensus 476 v~~~~ 480 (486)
T 1t90_A 476 VTARY 480 (486)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 98753
|
| >1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-104 Score=837.52 Aligned_cols=464 Identities=28% Similarity=0.451 Sum_probs=440.5
Q ss_pred CcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-HhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 29 YTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
..++||||+|+.+...++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|++++++|
T Consensus 18 ~~~~~i~g~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 97 (501)
T 1uxt_A 18 VYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIERNLDVF 97 (501)
T ss_dssp EECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccceeECCEEecCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 446899999997763499999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCC--CC--CceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP--VK--SKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
++++++|+|||..+++.|+..+++.++++++.++++.+...+.. .. +...+++++|+|||++|+|||||+.+.+++
T Consensus 98 a~~~~~e~Gk~~~ea~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 177 (501)
T 1uxt_A 98 AEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNK 177 (501)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHHHHHH
Confidence 99999999999999999999999999999998887766543322 12 336789999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ + ++++.|+.||+||.|+||||+.+|+.|++
T Consensus 178 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~---~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~~ 253 (501)
T 1uxt_A 178 ITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLP---G-KEAEKIVADDRVAAVSFTGSTEVGERVVK 253 (501)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCC---H-HHHHHHHTCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCC---c-HHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999974 5 88999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.
T Consensus 254 ~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~ 330 (501)
T 1uxt_A 254 VGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSS-LRVGDPR 330 (501)
T ss_dssp HHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHT-CCBSCTT
T ss_pred hcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHh-ccCCCcc
Confidence 888 9999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCC-ceeeceEeecCC---CCCCCcccceeeccEEeEe
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGS-KFFAPTILTNIT---PDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~E~fgPvl~v~~ 419 (507)
+++ +++||++++.+++++.+++++++++|+++++||+. .| +|++|||+.+++ ++|++++||+||||++|++
T Consensus 331 ~~~-~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~----~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~ 405 (501)
T 1uxt_A 331 DPT-VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR----LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVE 405 (501)
T ss_dssp STT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB----CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEE
T ss_pred ccC-CcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc----CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEe
Confidence 999 99999999999999999999999999999999975 37 999999999999 9999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCC-CCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEG-IISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~-~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++ ....+.+||||+|.||+|+++|++++++||+.
T Consensus 406 ~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~ 485 (501)
T 1uxt_A 406 VKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAY 485 (501)
T ss_dssp ESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEE
T ss_pred eCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCce
Confidence 99999999999999999999999999999999999999999999987 55567899999999999999999999999999
Q ss_pred eEEEec
Q psy3132 499 KYMCFG 504 (507)
Q Consensus 499 k~v~~~ 504 (507)
|+|+++
T Consensus 486 k~v~~~ 491 (501)
T 1uxt_A 486 KTIVFN 491 (501)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 999875
|
| >3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-103 Score=829.90 Aligned_cols=464 Identities=34% Similarity=0.577 Sum_probs=417.8
Q ss_pred CcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHH
Q psy3132 29 YTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQA 106 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 106 (507)
..++||||+|+.+... ++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++
T Consensus 7 ~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 86 (478)
T 3ty7_A 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLEFRHTSVKERQALLDKIVKEYENRKDD 86 (478)
T ss_dssp CCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred hhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 4578999999986443 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCChhhh-hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHH
Q psy3132 107 LAEIMTQESGKPPTES-LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVA 185 (507)
Q Consensus 107 l~~~~~~e~Gk~~~~a-~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~ 185 (507)
|++++++|+|||..++ +.|+..+++.++++++.+++..+... ....+++++|+|||++|+|||||+.+.+++++
T Consensus 87 la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 161 (478)
T 3ty7_A 87 IVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER-----RGDDLVVKEAIGVSGLITPWNFPTNQTSLKLA 161 (478)
T ss_dssp HHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE-----ETTEEEEEEECCCEEEECCSSSTTHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC-----CccceEEecCceEEEEECCCcchHHHHHHHHH
Confidence 9999999999999999 78999999999999998887655331 24578899999999999999999999999999
Q ss_pred hHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhh
Q psy3132 186 PALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265 (507)
Q Consensus 186 ~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~ 265 (507)
+||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|+ +.++++.|+.||+||.|+||||+.+|+.|++.+
T Consensus 162 ~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~---~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 162 AAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGD---GAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCC---TTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECC---ChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985 678899999999999999999999999999999
Q ss_pred cccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCC
Q psy3132 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKN 345 (507)
Q Consensus 266 ~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~ 345 (507)
++++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.++
T Consensus 239 a~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~g~p~~~ 317 (478)
T 3ty7_A 239 AKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQ-VRVGNPRED 317 (478)
T ss_dssp TTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHT-CCBSCTTST
T ss_pred HhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHh-ccCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc--CCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK--LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+ +++||++++.+++++.+++++++++|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 318 ~-~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 396 (478)
T 3ty7_A 318 G-TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDL 396 (478)
T ss_dssp T-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSH
T ss_pred C-CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCH
Confidence 9 99999999999999999999999999999999943211 25899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEe
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~ 503 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+ ....+.+||||+|.||+|+++|++|+++||+.|+|+.
T Consensus 397 ~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 397 DEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 999999999999999999999999999999999999999999 5556789999999999999999999999999999863
|
| >3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-102 Score=816.33 Aligned_cols=456 Identities=31% Similarity=0.553 Sum_probs=436.1
Q ss_pred CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 43 KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 43 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
..++++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..++
T Consensus 7 ~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 86 (462)
T 3etf_A 7 TQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQA 86 (462)
T ss_dssp CCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred CccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCC
Q psy3132 123 LGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202 (507)
Q Consensus 123 ~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~ 202 (507)
+.|+..+++.++++++.++++.+.. +....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~t 165 (462)
T 3etf_A 87 RAEVTKSAALCDWYAEHGPAMLNPE-PTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNV 165 (462)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCE-ECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHhHHHhcCCc-ccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCC
Confidence 9999999999999999988776654 323345678899999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcE
Q psy3132 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282 (507)
Q Consensus 203 ~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 282 (507)
|+++.++.+++.++|+|+|++|+|+| +.+.++.|+.||+++.|+||||+.+|+.|++.+++++||+++|+|||||+
T Consensus 166 p~~~~~l~~~l~~aglP~gv~~vv~g----~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p~ 241 (462)
T 3etf_A 166 TGCAQMIARILAEAGTPAGVYGWVNA----NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDPF 241 (462)
T ss_dssp HHHHHHHHHHHHHTTCCBTTEEECCC----CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEEE
T ss_pred cHHHHHHHHHHHHhCCCcCeEEEEEC----CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCcc
Confidence 99999999999999999999999997 45778899999999999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHH
Q psy3132 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 283 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~ 362 (507)
||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|.+++ +++||++++.+++++
T Consensus 242 iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~G~p~~~~-~~~gpli~~~~~~~v 319 (462)
T 3etf_A 242 IVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAA-LKMGDPLVEE-NDLGPMARFDLRDEL 319 (462)
T ss_dssp EECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH-CCBSCTTSTT-CSBCCCSCHHHHHHH
T ss_pred EECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHh-hcCCCCcccc-CcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 9999999999 999999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
.+++++++++|+++++||...+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~-~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~ 398 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAG-EGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIF 398 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSS-SSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEE
T ss_pred HHHHHHHHHCCCEEEeCCcccCC-CCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEE
Confidence 99999999999999999986543 69999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEeccC
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFGNL 506 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~~~ 506 (507)
|+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++.+
T Consensus 399 t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r~ 462 (462)
T 3etf_A 399 TADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNRV 462 (462)
T ss_dssp CSCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECCC
T ss_pred CCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEecC
Confidence 9999999999999999999999987777889999999999999999999999999999988653
|
| >4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-101 Score=822.94 Aligned_cols=482 Identities=23% Similarity=0.307 Sum_probs=444.8
Q ss_pred hhHHHHHhhhccC----CcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHH
Q psy3132 16 MHMKYLQKLCLST----YTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90 (507)
Q Consensus 16 ~~~~~~~~~~~~~----~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~ 90 (507)
.+..+.+++.++. ..++||||+|+.+.+.+.++||.| |+++++++.++.+|+++|+++|++||+.|+.++.++|+
T Consensus 46 ~r~~~~~a~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~ 125 (563)
T 4e3x_A 46 ERDALQKALKDLKGQTEAIPCVVGDEEVWTSDIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARKEWDLKPMADRA 125 (563)
T ss_dssp HHHHHHHHHHTTTTCCEECCEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHHHHHhCCccCCeEECCEEeecCCceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHH
Confidence 3455555555543 567999999998766678899998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-HHHHHHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEE
Q psy3132 91 IVLKRWLKELEGN-KQALAEIMTQESGKPPTESLGE-VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVG 168 (507)
Q Consensus 91 ~~L~~~a~~l~~~-~~~l~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 168 (507)
++|++++++|+++ +++|+.++++|+|||..+++.| +..+++.++++++.++++.+........+...+.++.|+|||+
T Consensus 126 ~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~ 205 (563)
T 4e3x_A 126 QVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVA 205 (563)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEE
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEE
Confidence 9999999999999 9999999999999999999877 9999999999999998877643222222345667788889999
Q ss_pred EEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccE
Q psy3132 169 LITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAG 248 (507)
Q Consensus 169 ~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~ 248 (507)
+|+|||||+....++++||| +||+||+|||+.+|+++.+|+++|.++|+|+|+||+|+|+ +.++++.|+.||+|++
T Consensus 206 ~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~---g~~~g~~L~~hp~v~~ 281 (563)
T 4e3x_A 206 AISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPAD---GPTFGDTVTSSEHLCG 281 (563)
T ss_dssp EECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHHTTCTTEEE
T ss_pred EECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHhCCCcCE
Confidence 99999999999999999999 5999999999999999999999999999999999999985 6789999999999999
Q ss_pred EEEeCCHHHHHHHHHhhcccccc------cccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhH
Q psy3132 249 ISFTGSTQVGKILYSHCSQGIKR------LSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVF 322 (507)
Q Consensus 249 v~ftGs~~~g~~i~~~~~~~~~~------~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~ 322 (507)
|+||||+.+|+.|++.+++++|| +++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++|
T Consensus 282 I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~ 361 (563)
T 4e3x_A 282 INFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLW 361 (563)
T ss_dssp EEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGH
T ss_pred EEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchH
Confidence 99999999999999999998885 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccccCCC-CCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 323 DQFVEMLKVEITKSFIQGDT-SKNDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 323 ~~f~~~l~~~~~~~~~~g~~-~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
|+|+++|++++++ +++|+| .+++ +++||++++.+++++.++|+++++ +|+++++||..+.. .|+|++|||+.+++
T Consensus 362 d~f~~~l~~~~~~-l~vGdp~~d~~-~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~-~G~fv~PTvl~~v~ 438 (563)
T 4e3x_A 362 PQIKGRLLEEHSR-IKVGDPAEDFG-TFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNES-VGYYVEPCIIESKD 438 (563)
T ss_dssp HHHHHHHHHHHHT-CCBSCTTTCTT-CSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECS-SSCEECCEEEEESC
T ss_pred HHHHHHHHHHHHh-ccCCCcccCcC-CccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCC-CCcEecCEEEecCC
Confidence 9999999999999 999999 9999 999999999999999999999996 79999999987543 69999999999999
Q ss_pred CCCCCcccceeeccEEeEecCC--HHHHHHHH-hcCCCCcEEEEecCCHHHHHHHHhhcc--eeeEEEcCCCCC--CCCC
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKT--EEESLCVA-NNSNTGLAGYFFTNDISQAWRVGKKLQ--VGMVGINEGIIS--HTEA 473 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~-n~~~~gl~a~v~t~d~~~~~~~~~~l~--~G~v~iN~~~~~--~~~~ 473 (507)
++|++++||+||||++|++|+| +||||+++ |+++|||+++|||+|.+.+++++++++ +|+|+||+.+.. .+.+
T Consensus 439 ~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~ 518 (563)
T 4e3x_A 439 PQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQ 518 (563)
T ss_dssp TTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTS
T ss_pred CCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCC
Confidence 9999999999999999999997 69999999 799999999999999999999999975 999999987643 4679
Q ss_pred cccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 474 AFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 474 pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.||+| +++|+++|++|++.|+|...
T Consensus 519 PFGG~k~SG~g~~~~G~~~l~~~~~~k~v~~~ 550 (563)
T 4e3x_A 519 PFGGARASGTNDKPGGPHYILRWTSPQVIKET 550 (563)
T ss_dssp CCCCEETTBCCCCTTSTTGGGGGBCCEEEEEE
T ss_pred CCCCccccCCCCccCCHHHHHHhCceEEEEEe
Confidence 99999999998 88999999999999999765
|
| >3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-100 Score=801.89 Aligned_cols=460 Identities=27% Similarity=0.422 Sum_probs=433.2
Q ss_pred cceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 30 TQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 30 ~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.++||||+|+.+... +.++||+||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|+
T Consensus 6 ~~~~I~G~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela 85 (490)
T 3ju8_A 6 STHYIAGQWLAGQGETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFAATLKSRADELA 85 (490)
T ss_dssp CCEEETTEEECCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cCceECCEEecCCCCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 378999999986544 8899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPAL 188 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 188 (507)
+++++|+|||..+++.|+..+++.++++++..+...+...+. ..+...+.+++|+|||++|+|||||+.+.++++++||
T Consensus 86 ~~~~~e~Gk~~~ea~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~AL 164 (490)
T 3ju8_A 86 RVIGEETGKPLWESATEVTSMVNKVAISVQAFRERTGEKSGP-LADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPAL 164 (490)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCEEEE-ETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHHHH
Confidence 999999999999999999999999999999888776654321 1234567779999999999999999999999999999
Q ss_pred hcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 189 AAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 189 aaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++++
T Consensus 165 aaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g----~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~~ 240 (490)
T 3ju8_A 165 LAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG----GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQ 240 (490)
T ss_dssp HHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC----SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTTC
T ss_pred HcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC----CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999997 468899999999999999999999999999999999
Q ss_pred cccc-ccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhh-HHHHHHHHHHHHHhccccCC-CCCC
Q psy3132 269 IKRL-SLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQGD-TSKN 345 (507)
Q Consensus 269 ~~~~-~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~~g~-~~~~ 345 (507)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ ||+|+++|++++++ +++|+ |.++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~~G~~~~~~ 319 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSAT-LRVGRFDEQP 319 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHH-CCBCCTTCSS
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHh-ccCCCCCCCC
Confidence 9998 7999999999999999999999999999999999999999999999996 99999999999999 99999 9999
Q ss_pred CCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 346 DKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 346 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+ +++||++++.+++++.+++++++++|+++++||...+. +|+|++|||+. +++++++++||+||||++|++|+|+||
T Consensus 320 ~-~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~e 396 (490)
T 3ju8_A 320 A-PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPID-GAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAA 396 (490)
T ss_dssp C-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCST-TSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHH
T ss_pred c-CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCC-CCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHH
Confidence 9 99999999999999999999999999999999976543 69999999999 999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+++|+++|||++||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||++ ++++||+.|+|++.
T Consensus 397 Ai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~ 470 (490)
T 3ju8_A 397 AIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYP 470 (490)
T ss_dssp HHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEE
T ss_pred HHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEe
Confidence 9999999999999999999999999999999999999999765 3578999999999975 48999999998764
|
| >4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-100 Score=802.22 Aligned_cols=453 Identities=26% Similarity=0.396 Sum_probs=426.6
Q ss_pred CCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 43 KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 43 ~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
+.++++||+||+++++++.++.+|+++|+++|++||+.|+++++++|.++|+++++.|++++++|++++++|+||+. ++
T Consensus 6 ~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~ 84 (474)
T 4h7n_A 6 KTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLS-IT 84 (474)
T ss_dssp CCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HH
T ss_pred CEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HH
Confidence 34999999999999999999999999999999999999999999999999999999999999999999999999985 55
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCc-cccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCC
Q psy3132 123 LGEVVYANSFVDWFSEEARRTYGE-LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAED 201 (507)
Q Consensus 123 ~~ev~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~ 201 (507)
..|+..+++.+++++..+.+.... ......++...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 85 ~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~ 164 (474)
T 4h7n_A 85 VLEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEI 164 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeeccccc
Confidence 679999999999998887765443 2333344566778899999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCc
Q psy3132 202 TPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP 281 (507)
Q Consensus 202 ~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~ 281 (507)
+|+++..+.+++.++|+|+|++|+++| +.+.+..|+.| ++.|+||||+.+|+.|++.+++++||+++|||||||
T Consensus 165 tp~~~~~l~~~~~~ag~p~gv~~~v~g----~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p 238 (474)
T 4h7n_A 165 APRFVAPLLMALNTVPELRDVLIFVEG----GGETGANLINY--VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDP 238 (474)
T ss_dssp SCTTHHHHHHHHTTCTTTTTTEEECCC----CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEE
T ss_pred CchHHHHHHhhhhhhcccccceeeccc----cchhhhhhhhc--cceEEeccccchhhhhhhhhhcccccccccCCCcCc
Confidence 999999999999999999999999997 56788889876 899999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHH
Q psy3132 282 FIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 282 ~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++.+ +++|+|.+++ +++||++++.++++
T Consensus 239 ~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~g~p~~~~-~~~gpli~~~~~~~ 316 (474)
T 4h7n_A 239 AIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHR-LQLAYPLVED-GAIGPIIAEKQAGI 316 (474)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHH-CCBCCSSGGG-CSBCCCSSHHHHHH
T ss_pred cccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhc-cccCCCcccc-cccCccccHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999 9999999999 99999999999999
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
+.+++++++++|+++++||...+..+|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 317 v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v 396 (474)
T 4h7n_A 317 INDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAV 396 (474)
T ss_dssp HHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEE
T ss_pred HHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEE
Confidence 99999999999999999998765446899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCCcccCCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIIS--HTEAAFGGVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfGG~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+|.++++++++++++|+|+||+.... .+..||||+|.||+| +++|++|+++||+.|+|+++
T Consensus 397 ~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~ 462 (474)
T 4h7n_A 397 FAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIK 462 (474)
T ss_dssp ECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEEC
Confidence 9999999999999999999999987653 468999999999998 78999999999999999886
|
| >4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-99 Score=849.73 Aligned_cols=491 Identities=24% Similarity=0.392 Sum_probs=459.7
Q ss_pred cCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCCC-CCeeEEecCCCHHHHHHHHHHHHHHhHH
Q psy3132 7 LGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPAN-DEHLADVPDMGVEDVQYAIMSAKEAFEQ 80 (507)
Q Consensus 7 ~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~ 80 (507)
.|.|++.......+.+++.++ ...++||||+|+.++..++++||+| ++++++++.++.+|++.|+++|++||+.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~~ 583 (1026)
T 4f9i_A 504 AMVDFTRADHRAAFPKHIAQVRTQLGKTYPLFINGKEVRTNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFPA 583 (1026)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHHTTCCEEECEEETTEEECCSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHhhccccccCceECCEEecCCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHHh
Confidence 477888887777777776653 2457899999998765599999998 9999999999999999999999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Q psy3132 81 WSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMV 160 (507)
Q Consensus 81 w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (507)
|+.+++++|+++|++++++|++++++|++++++|+|||..+++.|+..++++++||+..++++.+...+...++...+..
T Consensus 584 W~~~~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~ 663 (1026)
T 4f9i_A 584 WRDTDPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYADVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYF 663 (1026)
T ss_dssp HHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeE
Confidence 99999999999999999999999999999999999999999999999999999999999988766543332356678899
Q ss_pred eecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhh
Q psy3132 161 REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLL 240 (507)
Q Consensus 161 ~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L 240 (507)
++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.++++.|
T Consensus 664 ~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~---g~~vg~~L 740 (1026)
T 4f9i_A 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGR---GSVMGDYL 740 (1026)
T ss_dssp EEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCC---HHHHHHHH
T ss_pred eecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecC---cHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999985 67899999
Q ss_pred hcCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcc
Q psy3132 241 CTSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANR 314 (507)
Q Consensus 241 ~~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~ 314 (507)
+.||+|++|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+|++|
T Consensus 741 ~~hp~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~r 820 (1026)
T 4f9i_A 741 VDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSR 820 (1026)
T ss_dssp HHCTTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEE
T ss_pred HhCCCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCce
Confidence 99999999999999999999999988 478999999999999999999999999999999999999999999999
Q ss_pred eechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeece
Q psy3132 315 FLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPT 394 (507)
Q Consensus 315 v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Pt 394 (507)
||||+++||+|+++|++++++ +++|+|.+++ +++||+|++.+++++.++|++++++| ++++||..++. .|+|+.||
T Consensus 821 l~V~~~i~d~f~~~L~~~~~~-l~vG~p~d~~-t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~-~G~fv~PT 896 (1026)
T 4f9i_A 821 VIVLDAVYDKFIERLVSMAKA-TKVGPSEDPA-NYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAG-EGYFVPMT 896 (1026)
T ss_dssp EEEEGGGHHHHHHHHHHHHHH-CCBCCTTSTT-CSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSS-SSCCCCCE
T ss_pred EEecHHHHHHHHHHHHHHHHh-cccCCccccc-CccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCC-CCceecce
Confidence 999999999999999999999 9999999999 99999999999999999999999999 99999976542 49999999
Q ss_pred EeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCC
Q psy3132 395 ILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTE 472 (507)
Q Consensus 395 vl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~ 472 (507)
|+.++++++++++||+||||++|++|+|+||||+++|+++|||+++|||+|.+.++++++++++|+|+||+.+.. .+.
T Consensus 897 vl~~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~ 976 (1026)
T 4f9i_A 897 IIGGIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVER 976 (1026)
T ss_dssp EEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTT
T ss_pred eeecCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997653 467
Q ss_pred CcccCCCCCCCCC-CchHHHHHhchhceEEEec
Q psy3132 473 AAFGGVKESGLGR-EGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 473 ~pfGG~~~SG~g~-~~g~~~l~~~t~~k~v~~~ 504 (507)
+||||+|.||+|+ .+|+++|++||+.|+|+++
T Consensus 977 ~PFGG~k~SG~G~~~gG~~~l~~f~~~k~v~~~ 1009 (1026)
T 4f9i_A 977 QPFGGARMSGVGTKAGGPDYLLHFMDPRVVTEN 1009 (1026)
T ss_dssp SCBCCCGGGBSSCCBTSTTTGGGGEEEEEEEEE
T ss_pred CCCCCcCcCCCCCCcCCHHHHHHhceEEEEEEe
Confidence 9999999999995 6999999999999999875
|
| >2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-98 Score=799.31 Aligned_cols=464 Identities=22% Similarity=0.296 Sum_probs=422.5
Q ss_pred cceeECCEeeeCCC-CccccCCCCCCeeEEecCCCHHHHHHHHHHHHHH-hHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 30 TQAYINGEWVHSSK-KFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEA-FEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 30 ~~~~I~G~~~~~~~-~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
.++||||+|+.+.. .++++||+||+++++++.++ +|+++|+++|++| |+.|+.++.++|.++|+++++.|++++++|
T Consensus 8 ~~~~i~G~~~~~~~~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 86 (534)
T 2y53_A 8 LKNHVAGQWIAGTGAGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDY 86 (534)
T ss_dssp CCEEETTEEECCSSSCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred hhhEECCEEecCCCCeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHHhHHHH
Confidence 57899999996543 49999999999999999988 9999999999999 599999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCc-------cccCCCCC-ceeEEEeecc-cEEEEEcCCcccHH
Q psy3132 108 AEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE-------LVPSPVKS-KELLMVREPL-GVVGLITPWNFPMA 178 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~P~-Gvv~~i~p~n~P~~ 178 (507)
++++++|+|||..+++.|+..+++.+++|+..++++.+. ..+...++ ...+..++|+ |||++|+|||||+.
T Consensus 87 a~~~~~e~Gk~~~ea~~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN~P~~ 166 (534)
T 2y53_A 87 YAIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSW 166 (534)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTTCTTH
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCchHHH
Confidence 999999999999999999999999999999988766431 11211122 2457889997 99999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQ-IPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQV 257 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aG-lP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~ 257 (507)
+.++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|+ +.++++.| +++|.|+||||+.+
T Consensus 167 ~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~---~~~l~~~l---~~vd~V~FTGS~~~ 240 (534)
T 2y53_A 167 GLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGS---SAGLLDQI---RSFDVVSFTGSADT 240 (534)
T ss_dssp HHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSC---CTTSGGGC---CTTCEEEEESCHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCC---hHHHHhcc---cccCEEEEECCHHH
Confidence 999999999999999999999999999999999999999 799999999984 33333332 57999999999999
Q ss_pred HHHHHHhhc--ccccccccccCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHH
Q psy3132 258 GKILYSHCS--QGIKRLSLELGGNAPFIVYSNA-----NLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLK 330 (507)
Q Consensus 258 g~~i~~~~~--~~~~~~~lelgG~~~~iV~~da-----Dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~ 330 (507)
|+.|++.++ +++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||+++||+|+++|+
T Consensus 241 G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 320 (534)
T 2y53_A 241 AATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALK 320 (534)
T ss_dssp HHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHHH
Confidence 999998875 8899999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccc-----cCCCceeeceEeecCCCC--C
Q psy3132 331 VEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT-----KLGSKFFAPTILTNITPD--M 403 (507)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-----~~~g~~~~Ptvl~~~~~~--~ 403 (507)
+++++ +++|+|.+++ +++|||+++.+++++.++|+++ .+|+++++||.... ...|+|++|||+.+++++ +
T Consensus 321 ~~~~~-~~vG~p~~~~-~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 321 AKLAK-ITVGNPRNDA-VRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHTT-CCBBCTTSTT-CSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHh-ccCCCCCcCC-CCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 99999 9999999999 9999999999999999999999 68999999997431 125899999999999987 6
Q ss_pred CCcccceeeccEEeEecC---CH-----HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc--ceeeEEEcCCCC-----
Q psy3132 404 LCYTEEVFGPVAVCIKFK---TE-----EESLCVANNSNTGLAGYFFTNDISQAWRVGKKL--QVGMVGINEGII----- 468 (507)
Q Consensus 404 ~i~~~E~fgPvl~v~~~~---~~-----~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l--~~G~v~iN~~~~----- 468 (507)
++++||+||||++|++|+ |+ ||||+++|+++|||++||||+|.+.++++++++ ++|+|+||++..
T Consensus 398 ~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~ 477 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQT 477 (534)
T ss_dssp STTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCC
T ss_pred HHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCccccccc
Confidence 899999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ----CCCCCcccCCCCCCCCCC-chHHHHHhchhceEEEe
Q psy3132 469 ----SHTEAAFGGVKESGLGRE-GSRHGMEEFTQIKYMCF 503 (507)
Q Consensus 469 ----~~~~~pfGG~~~SG~g~~-~g~~~l~~~t~~k~v~~ 503 (507)
..+.+||||+|.||+|++ +|++++++|++.|+|..
T Consensus 478 ~~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~ 517 (534)
T 2y53_A 478 GHGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQA 517 (534)
T ss_dssp CSSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEE
T ss_pred ccCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeec
Confidence 246899999999999999 79999999999999865
|
| >3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-96 Score=772.13 Aligned_cols=442 Identities=24% Similarity=0.364 Sum_probs=400.1
Q ss_pred ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-
Q psy3132 45 FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL- 123 (507)
Q Consensus 45 ~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~- 123 (507)
+++.||.||+++++++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 8 ~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~ 87 (457)
T 3lns_A 8 HHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDL 87 (457)
T ss_dssp ---------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH
T ss_pred ccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HhHHHHHHHHHHHHHHHHHhcCc-cccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCC
Q psy3132 124 GEVVYANSFVDWFSEEARRTYGE-LVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAE 200 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~ 200 (507)
.|+..+++.++++++.++++... ..+. ...+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+
T Consensus 88 ~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~ 167 (457)
T 3lns_A 88 AEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSE 167 (457)
T ss_dssp HTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCC
Confidence 59999999999999888776542 1111 11346788999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC
Q psy3132 201 DTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA 280 (507)
Q Consensus 201 ~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~ 280 (507)
.+|+++.++++++.++ +|+|++|+|+| +.++++.|++ ++||.|+||||+.+|+.|++.+++++||+++||||||
T Consensus 168 ~tp~t~~~l~~l~~~a-lP~gvv~vv~g----~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~ 241 (457)
T 3lns_A 168 TTPETSAVIEKIIAEA-FAPEYVAVIQG----GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKC 241 (457)
T ss_dssp TCHHHHHHHHHHHHHH-CCTTTEEECCC----CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCE
T ss_pred CChHHHHHHHHHHHHh-CCHhhEEEecC----CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCC
Confidence 9999999999999999 99999999997 4678899998 7899999999999999999999999999999999999
Q ss_pred cEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHH
Q psy3132 281 PFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 281 ~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ ++ |.++ ++||++++.+++
T Consensus 242 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~---p~~~---~~gpli~~~~~~ 314 (457)
T 3lns_A 242 PLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKT-EL---PEIN---STGKLVTERQVQ 314 (457)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHH-HC---CSTT---TTCCCSSHHHHH
T ss_pred CCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHh-cC---CCcc---cccCCCCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998 77 5543 799999999999
Q ss_pred HHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhc-CCCCcEE
Q psy3132 361 KVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANN-SNTGLAG 439 (507)
Q Consensus 361 ~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~-~~~gl~a 439 (507)
++.++++++ ++++++||..+. +|+|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||++
T Consensus 315 rv~~~i~~a---~~~~~~gg~~~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a 389 (457)
T 3lns_A 315 RLVSLLEAT---QGQVLVGSQADV--SKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAV 389 (457)
T ss_dssp HHHHHHHHC---CSEEEECCCEEG--GGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEE
T ss_pred HHHHHHHhc---CCeEEeCCccCC--CCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEE
Confidence 999999975 369999998653 5999999999999999999999999999999999999999999999 9999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.+.++++++++++|+|+||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 390 ~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 390 YVFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EEECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 99999999999999999999999999754 467899999999999999999999999999999763
|
| >3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-95 Score=764.53 Aligned_cols=428 Identities=27% Similarity=0.424 Sum_probs=395.1
Q ss_pred CCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHH
Q psy3132 61 DMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEE 139 (507)
Q Consensus 61 ~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~ 139 (507)
..+.+|+++|+++|++||+.|+.++.++|.++|+++++.|+++.++|++++++|+|||..+++ .|+..++..++++++.
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 446779999999999999999999999999999999999999999999999999999999997 5999999988888776
Q ss_pred HHHhcCccc---cCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHc
Q psy3132 140 ARRTYGELV---PSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEA 216 (507)
Q Consensus 140 ~~~~~~~~~---~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~a 216 (507)
......... .....+...+++++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 654432111 01112456889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHH
Q psy3132 217 QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296 (507)
Q Consensus 217 GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~ 296 (507)
+|+|++|+|+| +.+.+..|+.| ++|.|+||||+.+|+.|++.+++++||+++|||||||+||++|||++.|++.
T Consensus 174 -lP~gvv~vv~g----~~~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~ 247 (469)
T 3sza_A 174 -LDKDLYPVING----GVPETTELLKE-RFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRR 247 (469)
T ss_dssp -SCTTTSCBCCC----SHHHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHH
T ss_pred -CCcceEEEEEC----CHHHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHH
Confidence 99999999997 34556677787 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeE
Q psy3132 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKV 376 (507)
Q Consensus 297 i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 376 (507)
+++++|.|+||.|++++|||||+++||+|+++|++++++ + +|+|.+++ +++||++++.+++++.+++ +|+++
T Consensus 248 i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~-~g~~~~~~-~~~gpli~~~~~~rv~~~i-----~ga~v 319 (469)
T 3sza_A 248 IAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKE-F-YGEDAKKS-RDYGRIISARHFQRVMGLI-----EGQKV 319 (469)
T ss_dssp HHHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHH-H-HCSCGGGC-TTCCCCSCHHHHHHHHHHH-----TTSEE
T ss_pred HHHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHH-h-cCCCCccc-CcccccCCHHHHHHHHHHH-----cCCEE
Confidence 999999999999999999999999999999999999998 7 69999988 9999999999999999998 69999
Q ss_pred EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc
Q psy3132 377 ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL 456 (507)
Q Consensus 377 ~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l 456 (507)
++||..+. +|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++
T Consensus 320 ~~GG~~~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l 397 (469)
T 3sza_A 320 AYGGTGDA--ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAET 397 (469)
T ss_dssp EECCCEET--TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHC
T ss_pred EeCCccCC--CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhC
Confidence 99998753 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeEEEcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 457 QVGMVGINEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 457 ~~G~v~iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
++|+|+||+... ..+.+||||+|.||+|+++|.+|+++||+.|+|+++
T Consensus 398 ~~G~V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~ 447 (469)
T 3sza_A 398 SSGGVAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVR 447 (469)
T ss_dssp CCSEEEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEEC
T ss_pred CcceEEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEEC
Confidence 999999999764 357899999999999999999999999999999886
|
| >3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-95 Score=773.55 Aligned_cols=472 Identities=23% Similarity=0.326 Sum_probs=416.8
Q ss_pred ccCcccchHHhhHHHHHhhhcc-CCcceeECCEeeeCCCCccccCCCCCCeeE-EecCCCHHHHHHHHHHHHHHhHHhhc
Q psy3132 6 CLGYSVTVKQMHMKYLQKLCLS-TYTQAYINGEWVHSSKKFPVYNPANDEHLA-DVPDMGVEDVQYAIMSAKEAFEQWSQ 83 (507)
Q Consensus 6 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~w~~ 83 (507)
.+|+|+..+ -.|.+.+..+ ...++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||+.|+.
T Consensus 8 ~~~~~~~~~---~~~~~~~~~~~~~~~~~I~G~~~~~~~---v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~ 81 (528)
T 3v4c_A 8 SSGVDLGTE---NLYFQSMMIFTPKGKHLVAGEWLDGAG---TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGY 81 (528)
T ss_dssp ------------------CCSCCCCCCEEETTEEECCSS---EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccccCcc---cHHHHHhhhcccccCceECCEEecCCC---ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 367787776 3455555543 4568999999998764 99999999998 99999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHH--hcCccc----cCC--CCCc
Q psy3132 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR--TYGELV----PSP--VKSK 155 (507)
Q Consensus 84 ~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~--~~~~ 155 (507)
++.++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++++++.+++ ..+... +.. ..+.
T Consensus 82 ~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (528)
T 3v4c_A 82 SSRKERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQ 161 (528)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBC
T ss_pred CCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999998876 222221 110 1234
Q ss_pred eeEEEeecccEEEEEcCCcccHHhHH--hhHHhHhhcCCeEEeccCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCC
Q psy3132 156 ELLMVREPLGVVGLITPWNFPMAMIT--RKVAPALAAGCTCVIKPAEDTPLTALALAALA----HEAQIPKGVLNVVTSS 229 (507)
Q Consensus 156 ~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~ 229 (507)
..+++++|+|||++|+|||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|+
T Consensus 162 ~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~ 241 (528)
T 3v4c_A 162 EIRLVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGG 241 (528)
T ss_dssp CEEEEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred cceeEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCC
Confidence 57889999999999999999999865 89999999999999999999999999998865 5689999999999985
Q ss_pred CCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc--cccccccCCCCcEEEcCCC---CHHHHHHHHHHHHHHh
Q psy3132 230 RTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI--KRLSLELGGNAPFIVYSNA---NLQKAVSGAMAAKFRN 304 (507)
Q Consensus 230 ~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~--~~~~lelgG~~~~iV~~da---Dl~~aa~~i~~~~~~~ 304 (507)
+.++++.|++||+||+|+||||+.+|+.|++.+++++ ||+++|||||||+||++|| |++.|++.+++++|.|
T Consensus 242 ---~~~~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n 318 (528)
T 3v4c_A 242 ---SRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMG 318 (528)
T ss_dssp ---CHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGG
T ss_pred ---CHHHHHHHHhCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhc
Confidence 6789999999999999999999999999999999999 9999999999999999999 8899999999999999
Q ss_pred cCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcc
Q psy3132 305 CGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKV 383 (507)
Q Consensus 305 ~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~ 383 (507)
+||.|++++|||||++ +||+|+++|++++++ ++. + +.+||++++.+.+++.++++ ++|+++++||..
T Consensus 319 ~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~~------~-~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~- 386 (528)
T 3v4c_A 319 AGQFCTNPGIAVVIEGADADRFTTAAVEALAK-VAP------Q-TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES- 386 (528)
T ss_dssp GGCCTTCCCEEEEESSHHHHHHHHHHHHHHHT-CCC------E-ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC-
T ss_pred CCCccccCcEEEEecccHHHHHHHHHHHHHHh-ccc------C-CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc-
Confidence 9999999999999997 999999999999998 754 3 67999999888888887764 479999999975
Q ss_pred ccCCCceeeceEeecCCCC---CCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHhhcc-
Q psy3132 384 TKLGSKFFAPTILTNITPD---MLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN--DISQAWRVGKKLQ- 457 (507)
Q Consensus 384 ~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~- 457 (507)
.|+|++|||+.+++++ |++++||+||||++|++|+|+||||+++|+++|||++||||+ |.+++++++++++
T Consensus 387 ---~g~~~~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~ 463 (528)
T 3v4c_A 387 ---SGRDASPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLER 463 (528)
T ss_dssp ---CTTEECCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHH
T ss_pred ---CCceeccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhh
Confidence 5999999999988887 899999999999999999999999999999999999999999 8999999999998
Q ss_pred -eeeEEEcCCCC---CCCCCcccC-CCCCCCCCCc--hHHHHHhchhceEE
Q psy3132 458 -VGMVGINEGII---SHTEAAFGG-VKESGLGREG--SRHGMEEFTQIKYM 501 (507)
Q Consensus 458 -~G~v~iN~~~~---~~~~~pfGG-~~~SG~g~~~--g~~~l~~~t~~k~v 501 (507)
+|+|+||+++. ..+.+|||| +|.||+|+++ |++|+++||++|++
T Consensus 464 ~aG~V~vN~~~~~~~~~~~~pfGG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 464 KAGRVLVNGFPTGVEVVDSMVHGGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp HEEEEEESSCTTCCCCSTTCCCCCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred cCcEEEEcCCCCCCccCCCCCCCCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99999999654 357899999 9999999985 99999999998864
|
| >3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-91 Score=779.35 Aligned_cols=463 Identities=27% Similarity=0.427 Sum_probs=429.3
Q ss_pred cccCcccchHHhhHHHHHhhhccCCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcC
Q psy3132 5 SCLGYSVTVKQMHMKYLQKLCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84 (507)
Q Consensus 5 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~ 84 (507)
...|+|++.+.....+.+++...... | .| ++.++.+|++.|+++|++||+.|+.+
T Consensus 515 n~~~~d~~~~~~~~~~~~~~~~~~~~-------~----------~p--------v~~a~~~dv~~Av~aA~~A~~~W~~~ 569 (1001)
T 3haz_A 515 NSRGVEFGARTALDQLLTDVKAETGD-------L----------KP--------IADATPDQAHAAVAAARAGFAGWSRT 569 (1001)
T ss_dssp CCCCCCTTSHHHHHHHHHHHHHCCCC-------C----------CC--------CCCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhhc-------C----------CC--------cccCCHHHHHHHHHHHHHHHHHhccC
Confidence 34799999999999998888764321 3 23 79999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc-CCCCCceeEEEeec
Q psy3132 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP-SPVKSKELLMVREP 163 (507)
Q Consensus 85 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P 163 (507)
++++|.++|+++++.|++++++|++++++|+|||..+++.|+..+++.++||+..+++..+.... ....+...++.++|
T Consensus 570 ~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P 649 (1001)
T 3haz_A 570 PAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRG 649 (1001)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999887654321 12346678899999
Q ss_pred ccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcC
Q psy3132 164 LGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTS 243 (507)
Q Consensus 164 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~ 243 (507)
+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+ +.+ ++.|+.|
T Consensus 650 ~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~---g~~-g~~L~~~ 725 (1001)
T 3haz_A 650 RGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGD---GRI-GAALTAH 725 (1001)
T ss_dssp CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCC---HHH-HHHHHHC
T ss_pred CcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecC---chH-HHHHHhC
Confidence 999999999999999999999999999999999999999999999999999999999999999985 555 9999999
Q ss_pred CCccEEEEeCCHHHHHHHHHhhccc---ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhh
Q psy3132 244 PHVAGISFTGSTQVGKILYSHCSQG---IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQ 320 (507)
Q Consensus 244 ~~v~~v~ftGs~~~g~~i~~~~~~~---~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~ 320 (507)
|+|+.|+||||+.+|+.|++.++++ +||+++|+|||||+||++|||++.|++.+++|+|.|+||.|+++++||||++
T Consensus 726 p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~ 805 (1001)
T 3haz_A 726 PDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQED 805 (1001)
T ss_dssp TTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHH
T ss_pred CCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHH
Confidence 9999999999999999999988854 8999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCC
Q psy3132 321 VFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNIT 400 (507)
Q Consensus 321 i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~ 400 (507)
++|+|+++|++++++ +++|+|.+++ +++||++++.+++++.++|++++.+| ++ +||..++ +|+|+.|||+.+
T Consensus 806 i~d~f~~~L~~~~~~-l~vGdp~d~~-t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~~--~G~fv~PTvl~~-- 877 (1001)
T 3haz_A 806 VADRMIEMVAGAARE-LKIGDPSDVA-THVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPAP--EGCFVAPHIFEL-- 877 (1001)
T ss_dssp HHHHHHHHHHHHHHT-CCBSCTTSTT-CSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCCC--SSSCCCCEEEEC--
T ss_pred HHHHHHHHHHHHHHh-cCCCCccccc-CccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccCC--CCcEEeeEEecC--
Confidence 999999999999999 9999999999 99999999999999999999999888 88 8887653 599999999975
Q ss_pred CCCCCcccceeeccEEeEecCC--HHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC--CCCCccc
Q psy3132 401 PDMLCYTEEVFGPVAVCIKFKT--EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS--HTEAAFG 476 (507)
Q Consensus 401 ~~~~i~~~E~fgPvl~v~~~~~--~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~--~~~~pfG 476 (507)
+++.+++||+||||++|++|++ +||||+++|+++|||++||||+|.+.++++++++++|+|+||+.... .+.+|||
T Consensus 878 ~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~~~~~~~~PFG 957 (1001)
T 3haz_A 878 TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFG 957 (1001)
T ss_dssp SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBC
T ss_pred CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCcCCCCCCCCCC
Confidence 6789999999999999999996 79999999999999999999999999999999999999999997653 3578999
Q ss_pred CCCCCCCC-CCchHHHHHhchhceEEEec
Q psy3132 477 GVKESGLG-REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 477 G~~~SG~g-~~~g~~~l~~~t~~k~v~~~ 504 (507)
|+|.||+| +.+|++++++||+.|+|+++
T Consensus 958 G~k~SG~G~~~gG~~gl~~ft~~K~v~~~ 986 (1001)
T 3haz_A 958 GNGLSGTGPKAGGPHYLARFATEQTVTIN 986 (1001)
T ss_dssp CCGGGBCCCCBTSTTSGGGGEEEEEEEEE
T ss_pred CcccCcCCCCCCCHHHHHHhceeeEEEEC
Confidence 99999999 56999999999999999875
|
| >1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-91 Score=742.69 Aligned_cols=438 Identities=19% Similarity=0.276 Sum_probs=402.0
Q ss_pred ccccCCCCCCee-EEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh
Q psy3132 45 FPVYNPANDEHL-ADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL 123 (507)
Q Consensus 45 ~~~~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~ 123 (507)
++++||+||+++ ++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||..+++
T Consensus 9 ~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~ 88 (510)
T 1ez0_A 9 FYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRLT 88 (510)
T ss_dssp EEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred EEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 899999999999 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHH--hcCccc----cCCCC-C-ceeEEEeecccEEEEEcCCcccHHhH--HhhHHhHhhcCCe
Q psy3132 124 GEVVYANSFVDWFSEEARR--TYGELV----PSPVK-S-KELLMVREPLGVVGLITPWNFPMAMI--TRKVAPALAAGCT 193 (507)
Q Consensus 124 ~ev~~~~~~l~~~~~~~~~--~~~~~~----~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l~~ALaaGN~ 193 (507)
.|+..+++.++++++.+++ ..+... +...+ + ...+++++|+|||++|+|||||+.+. .+++++||++||+
T Consensus 89 ~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~ 168 (510)
T 1ez0_A 89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCP 168 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCE
Confidence 9999999999999998875 333222 11111 1 24678999999999999999999985 4999999999999
Q ss_pred EEeccCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccc
Q psy3132 194 CVIKPAEDTPLTALALAALA----HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGI 269 (507)
Q Consensus 194 Vvlkps~~~~~~~~~l~~~l----~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 269 (507)
||+|||+.+|+++.++++++ .++|+|+|++|+|+|+ +.++++.|++||.||.|+||||+.+|+.|++.+++++
T Consensus 169 VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~---~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l 245 (510)
T 1ez0_A 169 VIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN---QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERP 245 (510)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS---CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSS
T ss_pred EEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCC---cHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccC
Confidence 99999999999999999988 5679999999999984 5678999999999999999999999999999999886
Q ss_pred --cccccccCCCCcEEEcCCCCHH--HHHHHHHHHHHHhcCCCcccCcceechhh-hHHHHHHHHHHHHHhccccCCCCC
Q psy3132 270 --KRLSLELGGNAPFIVYSNANLQ--KAVSGAMAAKFRNCGQACVAANRFLIQEQ-VFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 270 --~~~~lelgG~~~~iV~~daDl~--~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++ ++
T Consensus 246 ~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~-~~------ 318 (510)
T 1ez0_A 246 EPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ-QS------ 318 (510)
T ss_dssp SCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH-CC------
T ss_pred CCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHh-cC------
Confidence 9999999999999999999999 99999999999999999999999999999 999999999999998 54
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEeCCCccccCCCceeeceEeecCCCC---CCCcccceeeccEEeEec
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVILGGGKVTKLGSKFFAPTILTNITPD---MLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPvl~v~~~ 420 (507)
.||++++.+.+++.++++++++ +|+++++||. +|+|++|||+.+++++ |++++||+||||++|++|
T Consensus 319 -----~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~-----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~ 388 (510)
T 1ez0_A 319 -----PSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA-----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 388 (510)
T ss_dssp -----CBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC-----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred -----CCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC-----CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEe
Confidence 4688889999999999999994 7999999997 2899999999988777 999999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecCCH--HHHHHHHhhc--ceeeEEEcCCCC---CCCCCcccC-CCCCCCCCC--chHH
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTNDI--SQAWRVGKKL--QVGMVGINEGII---SHTEAAFGG-VKESGLGRE--GSRH 490 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~d~--~~~~~~~~~l--~~G~v~iN~~~~---~~~~~pfGG-~~~SG~g~~--~g~~ 490 (507)
+|+||||+++|+++|||++||||+|. +.++++++++ ++|+|+||++.. ..+.+|||| +|.||+|+. +|++
T Consensus 389 ~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~~G~~ 468 (510)
T 1ez0_A 389 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTSVGAE 468 (510)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCSSSGG
T ss_pred CCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCCccHH
Confidence 99999999999999999999999987 7899999999 799999998764 356899999 799999854 8999
Q ss_pred HHHhchhceEEE
Q psy3132 491 GMEEFTQIKYMC 502 (507)
Q Consensus 491 ~l~~~t~~k~v~ 502 (507)
|+++|++.|++.
T Consensus 469 gl~~~~~~k~~~ 480 (510)
T 1ez0_A 469 AIHRWLRPVAYQ 480 (510)
T ss_dssp GGGGGEEEEEEE
T ss_pred HHHHhheEEEEc
Confidence 999999988753
|
| >2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-84 Score=679.43 Aligned_cols=405 Identities=17% Similarity=0.137 Sum_probs=336.0
Q ss_pred cccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHc-------CCC
Q psy3132 46 PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQES-------GKP 118 (507)
Q Consensus 46 ~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-------Gk~ 118 (507)
-++||+||+++++++.++.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+ |||
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~ 89 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAP 89 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHH
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999999 799
Q ss_pred hh----hhhHhHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCC
Q psy3132 119 PT----ESLGEVVYANSFVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGC 192 (507)
Q Consensus 119 ~~----~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN 192 (507)
.. ++..|+..+++.++++++.+++..+...+.. ..+...++.++|+|||++|+||| |.+.+ +++++||++||
T Consensus 90 ~~~rl~~a~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN 167 (463)
T 2h5g_A 90 LLKRLSLSTSKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGN 167 (463)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTC
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCC
Confidence 87 5778999999999999988777666543321 13456789999999999999887 77777 89999999999
Q ss_pred eEEeccCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 193 TCVIKPAEDTPLTALALAALAHEA----QIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 193 ~Vvlkps~~~~~~~~~l~~~l~~a----GlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 168 ~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g----~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 168 GLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT----REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT----TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred EEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC----CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999 8 9999999997 3567899999999999999999999999999888
Q ss_pred ccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCC
Q psy3132 269 IKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKC 348 (507)
Q Consensus 269 ~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~ 348 (507)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------- 294 (463)
T 2h5g_A 241 GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------- 294 (463)
T ss_dssp SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-------------------------
T ss_pred CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-------------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred ccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHH
Q psy3132 349 NLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLC 428 (507)
Q Consensus 349 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 428 (507)
||+ + ++++++++++|++++.|+... . .++|+ +++|++++||+||||++|++|+|+||||+
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~-~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~ 354 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-S-YLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAID 354 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C------------------CCSSCCCCSSEEEEEEESSHHHHHH
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-c-cCccC--------CCCchHHhccccCceEEEEEeCCHHHHHH
Confidence 122 2 234677788999998554322 1 35443 57899999999999999999999999999
Q ss_pred HHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC--CC--chHHHHHhchhceEEEec
Q psy3132 429 VANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG--RE--GSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 429 ~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~ 504 (507)
++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+| ++ +|++|+++||+.|+|.++
T Consensus 355 ~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~ 434 (463)
T 2h5g_A 355 HIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRG 434 (463)
T ss_dssp HHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEEC
T ss_pred HHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEEC
Confidence 99999999999999999999999999999999999987766788999999999999 65 999999999999999876
Q ss_pred c
Q psy3132 505 N 505 (507)
Q Consensus 505 ~ 505 (507)
+
T Consensus 435 ~ 435 (463)
T 2h5g_A 435 K 435 (463)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-82 Score=661.49 Aligned_cols=418 Identities=17% Similarity=0.210 Sum_probs=367.7
Q ss_pred EEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHHHH
Q psy3132 57 ADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFVDW 135 (507)
Q Consensus 57 ~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~ 135 (507)
.+++.++.+|+++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+..+++. +....+ ++
T Consensus 4 ~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~---~~ 80 (464)
T 3k9d_A 4 EDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFAS---KH 80 (464)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHH---HH
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHH---HH
Confidence 34566788999999999999999999999999999999999999999999999999999999988753 332333 33
Q ss_pred HHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHH----H
Q psy3132 136 FSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA----A 211 (507)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~----~ 211 (507)
+..+..............+...+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|.++..++ +
T Consensus 81 ~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 81 VYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred HHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 333333221111111124567889999999999999999999999999999999999999999999999998765 4
Q ss_pred HHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccC-CCCcEEEcCCCCH
Q psy3132 212 LAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELG-GNAPFIVYSNANL 290 (507)
Q Consensus 212 ~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelg-G~~~~iV~~daDl 290 (507)
++.++|+|+|++|+|+++ +.+.++.|++||+||.|+||||+.+ .+.+++++||+ +|+| ||+|+||++|||+
T Consensus 161 ~~~~aG~P~gvv~vv~g~---~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl 232 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVP---TIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANI 232 (464)
T ss_dssp HHHHTTCCTTSEEECSSC---CHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCH
T ss_pred HHHHhCCCCCeEEEEeCC---CHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCH
Confidence 568999999999999985 6789999999999999999999985 45566788999 7888 9999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHH-------HhccccCCCC-CCCCCccCccCCHHHHHHH
Q psy3132 291 QKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEI-------TKSFIQGDTS-KNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 291 ~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~~g~~~-~~~~~~~gpl~~~~~~~~~ 362 (507)
+.|++.+++++|+|+||.|++++|||||+++||+|+++|+++. .+ +++|+|. +++ +++||+++.++++++
T Consensus 233 ~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~-~~~g~~~~~~~-~~~gp~i~~~~~~~i 310 (464)
T 3k9d_A 233 PRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEA-VQLGKFILRPN-GSMNPAIVGKSVQHI 310 (464)
T ss_dssp HHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHH-HHHHHHHBCTT-SCBCGGGTTCCHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhh-hhhcccccCCC-CccCcccCHHHHHHH
Confidence 9999999999999999999999999999999999999999885 44 7889887 667 899999999999999
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHH----HHHhcCCCCcE
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESL----CVANNSNTGLA 438 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai----~~~n~~~~gl~ 438 (507)
.++++.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+
T Consensus 311 ~~~~~~a~~~ga~vl~gg~~---------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~ 374 (464)
T 3k9d_A 311 ANLAGLTVPADARVLIAEET---------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHT 374 (464)
T ss_dssp HHHTTCCCCTTCCEEEEECC---------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEE
T ss_pred HHHhhhhhcCCCEEEEcCCC---------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCe
Confidence 99999888899999999853 456777765 89999999999999999997 79999999999
Q ss_pred EEEecCCHHHHHHHHhhcceeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 439 GYFFTNDISQAWRVGKKLQVGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 439 a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
+||||+|.+.+++|++++++|+|+||++.. ..+.+|||| +.+|.|.++|..++++|++.|+|.+.
T Consensus 375 a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~ 448 (464)
T 3k9d_A 375 LIIHSEDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATG 448 (464)
T ss_dssp EEEECSCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEEC
T ss_pred EEEEeCCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEec
Confidence 999999999999999999999999999764 357899998 78899999999999999999999764
|
| >1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-82 Score=663.17 Aligned_cols=394 Identities=15% Similarity=0.153 Sum_probs=324.4
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh-HhHHH-HHHHHHHHHHH
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL-GEVVY-ANSFVDWFSEE 139 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~-~ev~~-~~~~l~~~~~~ 139 (507)
.+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+|||. .+++ .|+.. ++..++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999999999999998 8885 88888 88899999888
Q ss_pred HHHhc------CccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHH
Q psy3132 140 ARRTY------GELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAA 211 (507)
Q Consensus 140 ~~~~~------~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~ 211 (507)
++... +...+.. ..+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 77665 3322211 12456789999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHH----H----cCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEE
Q psy3132 212 LAH----E----AQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFI 283 (507)
Q Consensus 212 ~l~----~----aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~i 283 (507)
++. + +|+|+|++|+|+ + +.++++.|..||+||.|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~---~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-T---RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-C---C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEE
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-C---HHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceE
Confidence 995 8 999999999999 5 557899999999999999999999999999887 699999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc---CCCCCCCCCccCccCCHHHHH
Q psy3132 284 VYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ---GDTSKNDKCNLGPLINLAQVE 360 (507)
Q Consensus 284 V~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~---g~~~~~~~~~~gpl~~~~~~~ 360 (507)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|++++++ +++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~-~~v~~~Gdp~~---------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLE-GGVTIHATKDL---------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHH-HCCCBEECHHH----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHh-cCCeecCCHHH----------------
Confidence 99999999999999999999999 99999999999999 9999999999999 876 66421
Q ss_pred HHHHH-HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEE
Q psy3132 361 KVDSI-VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439 (507)
Q Consensus 361 ~~~~~-i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a 439 (507)
.++ +++++ ++++||+ | +.||++ +++++++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 307 --~~~~i~~a~----~~~~gG~------g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a 370 (468)
T 1vlu_A 307 --KTAYFDKLN----ELGKLTE------A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTD 370 (468)
T ss_dssp --HHHHHHHHH----HHTCCCH------H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEE
T ss_pred --hcccccccc----eeeccCC------C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceE
Confidence 344 56555 3667774 4 689997 78899999999999999999999999999999999999999
Q ss_pred EEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCccc-----CCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFG-----GVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 440 ~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfG-----G~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||||+|.+.++++++++++|+|+||++....+.+||| |+|.||+|++ |++|+++||+.|+|.++
T Consensus 371 ~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~ 439 (468)
T 1vlu_A 371 AIVTENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRG 439 (468)
T ss_dssp EEECSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEEC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEEC
Confidence 9999999999999999999999999877667788999 9999999999 99999999999999875
|
| >1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-80 Score=640.24 Aligned_cols=388 Identities=19% Similarity=0.256 Sum_probs=344.1
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh--------HhHHHHHH
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL--------GEVVYANS 131 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 131 (507)
.+++++++++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 13 ~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~ 92 (427)
T 1o20_A 13 MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIK 92 (427)
T ss_dssp -CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999986 5554 68999999
Q ss_pred HHHHHHHHHHHhcCccccCC--CCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH
Q psy3132 132 FVDWFSEEARRTYGELVPSP--VKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209 (507)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l 209 (507)
.++++++++++ .+...+.. ..+...+++++|+|||++|+||| +.++++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l 169 (427)
T 1o20_A 93 ACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAI 169 (427)
T ss_dssp HHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHH
T ss_pred HHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHH
Confidence 99999987654 33322211 12445788999999999999886 478999999999999999999999999999999
Q ss_pred HHHHH----HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEc
Q psy3132 210 AALAH----EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVY 285 (507)
Q Consensus 210 ~~~l~----~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~ 285 (507)
++++. ++|+|+|++|+|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ .||+++|||||||+||+
T Consensus 170 ~~l~~~al~eaGlP~gvv~vv~g~--~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 170 VSAIREALKETEIPESSVEFIENT--DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHTTSSSCGGGEEECCCC--CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHcCCCcccEEEecCC--ChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 99998 689999999999973 1356788999999999999999999999999887 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHH
Q psy3132 286 SNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSI 365 (507)
Q Consensus 286 ~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~ 365 (507)
+|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ ++++
T Consensus 245 ~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~-~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRK-HGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHH-TTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHH-cCCe-------------------------
Confidence 999999999999999999999 9999999999999999999999999988 5431
Q ss_pred HHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCC
Q psy3132 366 VQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445 (507)
Q Consensus 366 i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d 445 (507)
++||... .+ |+ ||| +++++++++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 298 -----------~~gg~~~---~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d 358 (427)
T 1o20_A 298 -----------VRGCEKT---RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTEN 358 (427)
T ss_dssp -----------EEECHHH---HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSC
T ss_pred -----------eecChhh---hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCC
Confidence 2233321 13 33 896 34578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEecc
Q psy3132 446 ISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 446 ~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~ 505 (507)
.+.++++++++++|+|+||++....+.+||||.|.||+| +++|++|+++||+.|+|.+++
T Consensus 359 ~~~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 359 YSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 999999999999999999987766778999999999997 468999999999999998864
|
| >4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-79 Score=640.59 Aligned_cols=388 Identities=18% Similarity=0.210 Sum_probs=333.5
Q ss_pred HHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCCh----hhhh--------HhHHHHHH
Q psy3132 64 VEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPP----TESL--------GEVVYANS 131 (507)
Q Consensus 64 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~--------~ev~~~~~ 131 (507)
.+|+++|+++|++||+.|+.++.++|.++|+++++.|++++++|++++++|+||+. .+++ .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999985 3554 37889999
Q ss_pred HHHHHHHHHHHhcCccccC--CCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHH
Q psy3132 132 FVDWFSEEARRTYGELVPS--PVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209 (507)
Q Consensus 132 ~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l 209 (507)
.+++++.+++.. +...+. ...+...+++++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..+
T Consensus 105 ~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 181 (444)
T 4ghk_A 105 GLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTAL 181 (444)
T ss_dssp HHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHH
Confidence 999998876532 332221 123567889999999999999998 8 68899999999999999999999999999999
Q ss_pred HHHH----HHcCCCCCcEEEEeCCCCCch-HHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEE
Q psy3132 210 AALA----HEAQIPKGVLNVVTSSRTNAN-SVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIV 284 (507)
Q Consensus 210 ~~~l----~~aGlP~gvv~~v~g~~~~~~-~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV 284 (507)
++++ .++|+|+|++|+|+|+ +. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 182 ~~l~~~~l~~aGlP~gvv~vv~g~---~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 182 AKLIGEGLAEAGLPQDTVQVVETA---DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHTTCCGGGEEECCCC---CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHcCCCcccEEEEeCC---CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEE
Confidence 9987 7999999999999974 33 5788888999999999999999999998876 6999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc---CCCCCCCCCccCccCCHHHHHH
Q psy3132 285 YSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ---GDTSKNDKCNLGPLINLAQVEK 361 (507)
Q Consensus 285 ~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~---g~~~~~~~~~~gpl~~~~~~~~ 361 (507)
++|||++.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++ +++ |+|.
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~-~~~~~~g~p~------------------ 315 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYRE-KGVELRVDAD------------------ 315 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHH-TTCEEEECHH------------------
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHH-cCCeecCCHH------------------
Confidence 9999999999999999999999 9999999999999999999999999998 777 5532
Q ss_pred HHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEE
Q psy3132 362 VDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441 (507)
Q Consensus 362 ~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v 441 (507)
..++++++. .| ++ +++++++++||+||||++|++|+|+||||+++|+++|||++||
T Consensus 316 ~~~~i~~a~----------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v 371 (444)
T 4ghk_A 316 ARAVLEAAG----------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAI 371 (444)
T ss_dssp HHHHHHHTT----------------CC------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEE
T ss_pred HHHHHHhcc----------------cC------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEE
Confidence 134555431 12 12 3467899999999999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEec
Q psy3132 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 442 ~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+|.+.++++++++++|+|+||++....+..||||.|.||+| +++|++|+++||+.|+|+++
T Consensus 372 ~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~ 438 (444)
T 4ghk_A 372 VTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLG 438 (444)
T ss_dssp ECSBHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEEC
Confidence 9999999999999999999999998777788999999999998 67899999999999999875
|
| >3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-76 Score=618.99 Aligned_cols=410 Identities=18% Similarity=0.234 Sum_probs=341.0
Q ss_pred ecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhH-hHHHHHHHH-HHH
Q psy3132 59 VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG-EVVYANSFV-DWF 136 (507)
Q Consensus 59 v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l-~~~ 136 (507)
++.++.+|+++++++|++||+.|+.++.++|.++|+++++.+++++++|++++++|+|||..+++. |+..+.+.+ +++
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~ 80 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKY 80 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999999999999999999999999999999974 666666655 333
Q ss_pred HHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHH--
Q psy3132 137 SEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAH-- 214 (507)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~-- 214 (507)
.. .+..+. .+ ...+...+.+++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++++.
T Consensus 81 ~~--~~~~g~-~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a 156 (452)
T 3my7_A 81 KD--EQTCGI-LE-EDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDA 156 (452)
T ss_dssp TT--CCCSEE-C--------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred hh--cccccc-cc-CCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHH
Confidence 32 111111 11 1234567889999999999999999999999999999999999999999999999998888765
Q ss_pred --HcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHH
Q psy3132 215 --EAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292 (507)
Q Consensus 215 --~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~ 292 (507)
++|+|+|++|+|+++ +.++++.|++||+|+.|+||||+.+++ .+++++||+++|+|||+|+||++|||++.
T Consensus 157 ~~~aG~P~gvv~~v~g~---~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~~~kp~~~e~gG~~p~iV~~dADl~~ 229 (452)
T 3my7_A 157 AVAAGAPKDIIGWIDQP---SVELSNALMKHDDIALILATGGPGMVK----AAYSSGKPAIGVGAGNVPVVIDETADIKR 229 (452)
T ss_dssp HHHTTCCTTSEEECSSC---CHHHHHHHHHCTTCCEEEECSCHHHHH----HHHTSSSCEEECC--CEEEEECTTSCHHH
T ss_pred HHHcCCCcCcEEEEcCC---CHHHHHHHHhCCCccEEEEECcHHHHH----HHHhcCCCEEecCCCCCeEEEeCCCCHHH
Confidence 789999999999985 678999999999999999999999755 45567899999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHC
Q psy3132 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISK 372 (507)
Q Consensus 293 aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ 372 (507)
|++.+++++|+|+||.|+++++||||+++||+|+++|++ ..||++++.+++++.++++++...
T Consensus 230 Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~-----------------~~gpli~~~~~~~v~~~i~~~~~~ 292 (452)
T 3my7_A 230 AVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFAS-----------------HKAHVLSKTDADKVRKVLLIDGAL 292 (452)
T ss_dssp HHHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHT-----------------TTEEECCHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHH-----------------hCCCcCCHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999988863 248999999999999999876666
Q ss_pred CCeEEeCCCccc--cCCCceeeceE-------eecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCC----CCcEE
Q psy3132 373 GAKVILGGGKVT--KLGSKFFAPTI-------LTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSN----TGLAG 439 (507)
Q Consensus 373 Ga~v~~gg~~~~--~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~----~gl~a 439 (507)
|+++ +||.... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||++
T Consensus 293 ~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta 370 (452)
T 3my7_A 293 NAKI-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTS 370 (452)
T ss_dssp CGGG-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCeE-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEE
Confidence 7776 4765421 11489999997 778899999876 89999999999999999999999985 99999
Q ss_pred EEecCCHHHHHH---HHhhcceeeEEEcCCCCCCCCCcccCCCC----------------CCCCCCchHHHHHhchhceE
Q psy3132 440 YFFTNDISQAWR---VGKKLQVGMVGINEGIISHTEAAFGGVKE----------------SGLGREGSRHGMEEFTQIKY 500 (507)
Q Consensus 440 ~v~t~d~~~~~~---~~~~l~~G~v~iN~~~~~~~~~pfGG~~~----------------SG~g~~~g~~~l~~~t~~k~ 500 (507)
+|||+|.+.+++ +++++++|+|+||++. ||||.|. -|-+...+.-+.+++.+.|+
T Consensus 371 ~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~------~~Gg~G~~~~f~~~~~~t~g~g~~Gg~~~~~nv~~~~l~n~~~ 444 (452)
T 3my7_A 371 GLYTNQDVNADRIRYFGDKMKTARILINIPT------THGGIGDLYNFNVAPSLTLGCGSWGGNSISENVGPKHLINKKT 444 (452)
T ss_dssp EEESCTTTCHHHHHHHHHHCCCSEEEESCCC------C----------------------------CCCCCGGGGEEEEE
T ss_pred EEEcCCHHHHHHHHHHHHhCCEEEEEECCCC------CCcccccccccCcCceEeeeccccCCCccCCCCChhHeeeeeE
Confidence 999999888777 9999999999999864 4444332 22222344457788888888
Q ss_pred EEec
Q psy3132 501 MCFG 504 (507)
Q Consensus 501 v~~~ 504 (507)
|..+
T Consensus 445 v~~~ 448 (452)
T 3my7_A 445 VAKR 448 (452)
T ss_dssp EECC
T ss_pred EEee
Confidence 8654
|
| >4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.031 Score=55.83 Aligned_cols=259 Identities=17% Similarity=0.191 Sum_probs=146.9
Q ss_pred CCCceeEEEeecccEEEEEcCCc---ccHHhHHhhHHhHhhcCCe--EEeccCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q psy3132 152 VKSKELLMVREPLGVVGLITPWN---FPMAMITRKVAPALAAGCT--CVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226 (507)
Q Consensus 152 ~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v 226 (507)
.+|.....++.|+--|++..|.- || .+.++..+||-.+|.. |+.-|++.- ...-.+.-..+.+|... +.
T Consensus 118 ~~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy 191 (423)
T 4gic_A 118 ADGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VF 191 (423)
T ss_dssp TTSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EE
T ss_pred CCCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EE
Confidence 45667778899999999999943 54 3455678999999986 334454321 11222333445556432 33
Q ss_pred eCCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhccccccccccc-CCCCcEEE--cCCCCHHHHHHHHHH
Q psy3132 227 TSSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLEL-GGNAPFIV--YSNANLQKAVSGAMA 299 (507)
Q Consensus 227 ~g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lel-gG~~~~iV--~~daDl~~aa~~i~~ 299 (507)
.- +|...-.+|. .-|.||.|+=.|..-+..+=..-.+. +-..+ .|.+=++| ++++|.+.++..++.
T Consensus 192 ~v---GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g~----VgIDm~AGPSEilViAD~~a~p~~vAaDLls 264 (423)
T 4gic_A 192 RI---GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFGQ----VGIDMVAGPSEILVISDGRTDPDWIAMDLFS 264 (423)
T ss_dssp CC---CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBTT----BEECCCCCCCEEEEEECSCSCHHHHHHHHHH
T ss_pred Ec---CChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcCC----cCcccccccceEEEEeCCCCCHHHHHHHHHH
Confidence 32 2555555554 36889999999998765433222221 22222 35554433 556899998888876
Q ss_pred HHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHH-CCCeEEe
Q psy3132 300 AKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAIS-KGAKVIL 378 (507)
Q Consensus 300 ~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~ 378 (507)
-+=.. -.+. .++|..+ ++|.++..+++.+.++. +... + .+..+.. .|
T Consensus 265 QAEHd----~~a~-~iLvT~s--~~la~~V~~~i~~~l~~-------------l~r~---~----i~~~sl~~~g----- 312 (423)
T 4gic_A 265 QAEHD----EDAQ-AILISPD--AAHLEAVQASIERLLPG-------------MERA---E----VIRTSLERRG----- 312 (423)
T ss_dssp HHTTC----TTCE-EEEEESC--HHHHHHHHHHHHHHGGG-------------CTTH---H----HHHHHHHHHC-----
T ss_pred hhccC----CCCe-EEEEeCc--HHHHHHHHHHHHHHHhh-------------CccH---H----HHHHHHhcCc-----
Confidence 55322 2333 3455443 34455555444441110 1111 1 1122221 12
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ- 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~- 457 (507)
.++.++|.+|+++++|..-.= -.-|.++|.. .+..+++
T Consensus 313 -------------------------------------~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~n 351 (423)
T 4gic_A 313 -------------------------------------GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRN 351 (423)
T ss_dssp -------------------------------------EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCC
T ss_pred -------------------------------------eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcE
Confidence 133468899999999985443 4667788864 5778886
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++...+. .++-+|-+ |..|+.+.-+.+.|++.-++
T Consensus 352 AGaIFlG~~tp~~~GDY~aG~NHvLPT~-----G~Ar~~sgLsv~~F~K~~s~ 399 (423)
T 4gic_A 352 AGAIFMGRYTAEALGDYCAGPNHVLPTS-----GTARFSSPLGVYDFQKRSSL 399 (423)
T ss_dssp CSEEEEC----------------CCCCT-----TGGGTCCCCCGGGGEEEEEE
T ss_pred eceeecCCCCchhhhhcCcCCCccCCCC-----CcccccCCCCHHHeeeeeeE
Confidence 99999986543 13445554 45666666678888875443
|
| >1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.08 Score=52.97 Aligned_cols=256 Identities=16% Similarity=0.166 Sum_probs=149.9
Q ss_pred CCceeEEEeecccEEEEEcCC---cccHHhHHhhHHhHhhcCCeEEe--ccCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q psy3132 153 KSKELLMVREPLGVVGLITPW---NFPMAMITRKVAPALAAGCTCVI--KPAEDTPLTALALAALAHEAQIPKGVLNVVT 227 (507)
Q Consensus 153 ~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~ALaaGN~Vvl--kps~~~~~~~~~l~~~l~~aGlP~gvv~~v~ 227 (507)
+|.....++.|+--|++..|. -|| .+.++..+||-.+|..=|+ -|+...|. +.-..+.+|... +..
T Consensus 113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~i~p~----iL~AA~l~Gv~e----Iy~ 183 (434)
T 1kae_A 113 PGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFN 183 (434)
T ss_dssp TTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEE
T ss_pred CCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCCCCHH----HHHHHHHcCCCE----Eee
Confidence 355666788999999999996 355 4556678999999986554 44423332 333445566443 232
Q ss_pred CCCCCchHHHHhhh----cCCCccEEEEeCCHHHH--HHHHHhhccccccccccc-CCCCcEEE--cCCCCHHHHHHHHH
Q psy3132 228 SSRTNANSVGKLLC----TSPHVAGISFTGSTQVG--KILYSHCSQGIKRLSLEL-GGNAPFIV--YSNANLQKAVSGAM 298 (507)
Q Consensus 228 g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g--~~i~~~~~~~~~~~~lel-gG~~~~iV--~~daDl~~aa~~i~ 298 (507)
- +|...-.+|. .-|+||+|+=.|..-+. |+..... ...+-..+ .|.+=++| +++||.+..+..++
T Consensus 184 v---GGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~---~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLL 257 (434)
T 1kae_A 184 V---GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQR---LDGAAIDMPAGPSEVLVIADSGATPDFVASDLL 257 (434)
T ss_dssp C---CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHC---TTSCEESCCCCCCEEEEEECTTSCHHHHHHHHH
T ss_pred c---ccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhh---cCccccCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 2 1555444554 46889999999988654 3332111 11122222 35554444 56789999888887
Q ss_pred HHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEe
Q psy3132 299 AAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378 (507)
Q Consensus 299 ~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 378 (507)
.-+=.. -.+. .++|..+ ++|.++..+++.+.+. . +.. . +.++.+.
T Consensus 258 sQAEHd----~~a~-aiLvT~s--~~la~~V~~ev~~ql~----------~---lpr---~----~ia~~sl-------- 302 (434)
T 1kae_A 258 SQAEHG----PDSQ-VILLTPA--ADMARRVAEAVERQLA----------E---LPR---A----ETARQAL-------- 302 (434)
T ss_dssp HHHTTC----TTCE-EEEEESC--HHHHHHHHHHHHHHHT----------T---CTT---H----HHHHHHH--------
T ss_pred HHhccC----CCCc-EEEEECC--HHHHHHHHHHHHHHHH----------h---CCh---H----HHHHHHH--------
Confidence 655322 2333 3444433 3444444444443110 0 001 0 1112211
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcc-
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQ- 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~- 457 (507)
..- .|+.++|++||++++|..-.= -.-|.++|. +.+..+++
T Consensus 303 ---------------------------------~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp---~~~l~~I~n 344 (434)
T 1kae_A 303 ---------------------------------NAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNA---RELVDSITS 344 (434)
T ss_dssp ---------------------------------TTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTH---HHHGGGCCS
T ss_pred ---------------------------------HcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCH---HHHHhhcCc
Confidence 111 345579999999999986444 467888886 45678886
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++..++. .++-+|-+| ..|+.|.-+++.|++.-++
T Consensus 345 AGaIFlG~~tpe~~GDY~aG~NHvLPT~G-----~AR~~sgLsV~~F~K~~s~ 392 (434)
T 1kae_A 345 AGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 392 (434)
T ss_dssp CSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCSCGGGGEEEEEE
T ss_pred ccchhcCCCCchhhcccccCCCcccCCCC-----ceeccCCCcHHhccceeeE
Confidence 99999997654 245566555 5666666778888876443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 507 | ||||
| d1bxsa_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-156 | |
| d1o04a_ | 494 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-156 | |
| d1a4sa_ | 503 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-148 | |
| d1wnda_ | 474 | c.82.1.1 (A:) Putative betaine aldehyde dehydrogen | 1e-135 | |
| d1euha_ | 474 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-115 | |
| d1uzba_ | 516 | c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen | 1e-105 | |
| d1ky8a_ | 499 | c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3 | 3e-95 | |
| d1ad3a_ | 446 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 5e-92 | |
| d1ez0a_ | 504 | c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), | 1e-53 | |
| d1o20a_ | 414 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 2e-44 | |
| d1vlua_ | 436 | c.82.1.1 (A:) Gamma-glutamyl phosphate reductase { | 4e-19 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Score = 452 bits (1165), Expect = e-156
Identities = 174/481 (36%), Positives = 265/481 (55%), Gaps = 14/481 (2%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQ 83
YT+ +IN EW S KKFPV+NPA +E L +V + EDV A+ +A++AF+ W
Sbjct: 13 YTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRT 72
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYAN-SFVDWFSEEARR 142
ERG +L + +E ++ LA + GK + + + + + + A +
Sbjct: 73 MDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADK 132
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
G +P + EP+GV G I PWNFP+ M K+ PAL+ G T V+KPAE T
Sbjct: 133 IQGRTIPMD-GNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQT 191
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL + +L EA P GV+N+V + G + + V ++FTGST+VGK++
Sbjct: 192 PLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKLIK 248
Query: 263 SHCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
+ +KR+SLELGG +P IV+++A+L AV A F + GQ C+AA+R ++E +
Sbjct: 249 EAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESI 308
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FV VE K ++ G+ + GP I+ Q EK+ +++ +GAK+ GGG
Sbjct: 309 YDEFVRR-SVERAKKYVLGNPLTPG-VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGG 366
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ +++T DM EE+FGPV +KFK+ ++ + ANN+ GL+
Sbjct: 367 PWGNKGY-FIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGI 425
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
FTNDI +A V LQ G V +N + + FGG K SG GRE +G E+T++K +
Sbjct: 426 FTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTV 485
Query: 502 C 502
Sbjct: 486 T 486
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Score = 451 bits (1160), Expect = e-156
Identities = 168/481 (34%), Positives = 256/481 (53%), Gaps = 14/481 (2%)
Query: 29 YTQAYINGEWV--HSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQ 83
Q +IN EW S K FP NP+ E + V + EDV A+ +A+ AF+ W +
Sbjct: 13 CNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRR 72
Query: 84 TTPKERGIVLKRWLKELEGNKQALAEIMTQESGKP-PTESLGEVVYANSFVDWFSEEARR 142
RG +L R +E ++ LA + T ++GKP L ++ + +++ A +
Sbjct: 73 MDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADK 132
Query: 143 TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDT 202
+G+ +P EP+GV G I PWNFP+ M K+ PALA G V+K AE T
Sbjct: 133 YHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQT 191
Query: 203 PLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILY 262
PLTAL +A L EA P GV+N+V + G + + V ++FTGST++G+++
Sbjct: 192 PLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGRVIQ 248
Query: 263 SHC-SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQV 321
S +KR++LELGG +P I+ S+A++ AV A A F N GQ A +R +QE +
Sbjct: 249 VAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDI 308
Query: 322 FDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGG 381
+D+FVE V KS + G+ + GP ++ Q +K+ + +GAK++ GGG
Sbjct: 309 YDEFVER-SVARAKSRVVGNPFDSK-TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 382 KVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYF 441
G F PT+ ++ M EE+FGPV +KFKT EE + ANNS GLA
Sbjct: 367 IAADRGY-FIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAV 425
Query: 442 FTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501
FT D+ +A + + LQ G V +N + ++ FGG K SG GRE +G++ +T++K +
Sbjct: 426 FTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTV 485
Query: 502 C 502
Sbjct: 486 T 486
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Score = 431 bits (1110), Expect = e-148
Identities = 170/483 (35%), Positives = 252/483 (52%), Gaps = 15/483 (3%)
Query: 28 TYTQAYINGEWVHSSKK---FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQT 84
T Y G + S PV+ PA L + G E+V A+ SA+ A+ +WS+
Sbjct: 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKM 77
Query: 85 TPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTY 144
ER V+ + + + +A++ +GK TE+ ++ A +++++ A
Sbjct: 78 AGIERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLS 137
Query: 145 GELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPL 204
G+ + P REPLGV I WN+P + K APALA G V KP+ TP+
Sbjct: 138 GQHIQLP-GGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPV 196
Query: 205 TALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264
T + LA + HEA +P G++NVV G LLC P+VA +SFTGS GK +
Sbjct: 197 TGVILAEIFHEAGVPVGLVNVVQGGAE----TGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
++ +K ++LELGG +P +++ + L+ AV GA+ A F GQ C R +Q ++ Q
Sbjct: 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQ 312
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
F+E + V+ TK+ + GD + +G LI+ Q++KV V A +GA+V+ GG +T
Sbjct: 313 FLEEV-VKRTKAIVVGDP-LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLT 370
Query: 385 KLGSK-----FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAG 439
K F +P +L N DM C EE+FGPV + F TEEE L ANN+ GLA
Sbjct: 371 PSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLAS 430
Query: 440 YFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499
FT DIS+A RV L+ G IN IS E FGG K SG GRE + ++ ++Q+K
Sbjct: 431 GVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490
Query: 500 YMC 502
+
Sbjct: 491 TVI 493
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Score = 398 bits (1022), Expect = e-135
Identities = 172/475 (36%), Positives = 251/475 (52%), Gaps = 8/475 (1%)
Query: 30 TQAYINGEWVHSS-KKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKE 88
+ INGE V +K PVYNPA + L ++ + E V A+ +A AF +W QTTPK
Sbjct: 3 HKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKV 62
Query: 89 RGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV 148
R L + +E N Q AE+ ++ GKP + + + A V F A R L
Sbjct: 63 RAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLA 122
Query: 149 PSPVKSKELLMV-REPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTAL 207
M+ R+PLGVV I PWN+P+ M K+APALAAG V+KP+E TPLTAL
Sbjct: 123 AGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTAL 182
Query: 208 ALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQ 267
LA LA + P GV+N++ +VG L P V +S TGS G+ + SH +
Sbjct: 183 KLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS 238
Query: 268 GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVE 327
IKR +ELGG AP IV+ +A+++ V G + N GQ C AA R Q+ ++D VE
Sbjct: 239 SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVE 298
Query: 328 MLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLG 387
L + ++ LGPL +LA +E+V V++A + G ++ GG+ K
Sbjct: 299 KLGAAVATLKS--GAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGN 356
Query: 388 SKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447
++APT+L D +EVFGPV F EE+ + AN+S GLA +T D+
Sbjct: 357 GYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVG 416
Query: 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502
+A RV +LQ G +N + +E GG K SG G++ S +G+E++T ++++
Sbjct: 417 RAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVM 471
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Score = 347 bits (890), Expect = e-115
Identities = 148/483 (30%), Positives = 237/483 (49%), Gaps = 19/483 (3%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERG 90
+ Y+NGEW S + +Y PA+ L VP M E+V Y SAK+A W + ER
Sbjct: 5 KNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERA 64
Query: 91 IVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEAR-----RTYG 145
L + L +K+ + I+++E K ++ EVV +++ +EE G
Sbjct: 65 AYLHKVADILMRDKEKIGAILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEG 124
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205
+ K K ++ REP+G+V I+P+N+P+ + K+APAL AG KP ++
Sbjct: 125 GSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSIS 184
Query: 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
L LA EA +P GV N +T + +G + V I+FTGST +G+
Sbjct: 185 GLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGE--RIGK 239
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
G++ + LELGG IV +A+L+ +A F GQ C A R L+ E V D+
Sbjct: 240 MAGMRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADEL 299
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
VE ++ ++ I D ++ PLI+ + V+ ++ DA KGA + +
Sbjct: 300 VEKIREKVLALTIGNP---EDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--- 353
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
P + +T DM EE FGPV I+ + EE++ ++N S GL FTND
Sbjct: 354 -EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTND 412
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHTEAA-FGGVKESGLGREGSRHGMEEFTQIKYMCFG 504
+A+ + ++L+VG V IN T+ F G K+SG G +G ++ +E T +K + F
Sbjct: 413 FPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVF- 471
Query: 505 NLE 507
+++
Sbjct: 472 DIK 474
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 323 bits (828), Expect = e-105
Identities = 133/481 (27%), Positives = 216/481 (44%), Gaps = 19/481 (3%)
Query: 33 YINGEWVHSSKKFPVYNP-ANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGI 91
YI GEWV + ++ NP A E + G + + A+ +A +AF+ W ++R
Sbjct: 41 YIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFKTWKDWPQEDRSR 100
Query: 92 VLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSP 151
+L + + K+ L + E GK E+ +V A F+++++ A R V
Sbjct: 101 LLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVV 160
Query: 152 VKSKELLMVREPL-GVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210
E G +I PWNFP+A+ T + +A G T + KPAED + +
Sbjct: 161 PYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVF 220
Query: 211 ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS------H 264
+ HEA P GV+N + VG L P + I+FTGS +VG +Y
Sbjct: 221 EIFHEAGFPPGVVNFLPGV---GEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAP 277
Query: 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
KR +E GG IV A+ A G + + + GQ C AA+R ++ + ++
Sbjct: 278 GQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEP 337
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
+E ++ + G +N +LGP+++ Q KV S ++ ++G V+ GGK
Sbjct: 338 VLER-VLKRAERLSVGPAEEN--PDLGPVVSAEQERKVLSYIEIGKNEGQLVL--GGKRL 392
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ F APT+ T + P EE+FGPV I+ K E+L VAN++ GL G ++
Sbjct: 393 EGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSR 452
Query: 445 DISQAWRVGKKLQVGMVGINEGIISHT--EAAFGGVKESGLGRE-GSRHGMEEFTQIKYM 501
++ VG + N I FGG K SG + G+ + F ++K +
Sbjct: 453 KREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAV 512
Query: 502 C 502
Sbjct: 513 A 513
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Score = 296 bits (757), Expect = 3e-95
Identities = 131/479 (27%), Positives = 220/479 (45%), Gaps = 14/479 (2%)
Query: 31 QAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQ-WSQTTPKER 89
+Y+ GEW S ++ V +P + +A V E+V+ + + ER
Sbjct: 18 PSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTER 77
Query: 90 GIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARR----TYG 145
VL++ +E N AE++ +GKP + ++GEV A + + ++
Sbjct: 78 LAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIP 137
Query: 146 ELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLT 205
E L+ REPLGVV ITP+N+P+ K+ + G V+KP+ PL
Sbjct: 138 GDWTYDTLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLP 197
Query: 206 ALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHC 265
A A +A + G + + + VA +SFTGST+VG+ +
Sbjct: 198 AAM----AVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG 253
Query: 266 SQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQF 325
G+K+ +ELGG P IV +A+L A + GQ C A L + V+ +
Sbjct: 254 --GVKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL 311
Query: 326 VEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK 385
VE + + S GD + ++GPLI+ + V+++ + ++DA+ KG +V+ GG ++
Sbjct: 312 VEEVA-KRLSSLRVGDPR-DPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGP 369
Query: 386 LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTND 445
+ + DM+ Y EVF PVA ++ K ++++ +AN GL F D
Sbjct: 370 TYVQPTLVEAPADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRD 429
Query: 446 ISQAWRVGKKLQVGMVGINEGIISHT-EAAFGGVKESGLGREGSRHGMEEFTQIKYMCF 503
+ + R + L+VG + IN+ FGG K+SG+ REG + +E T K + F
Sbjct: 430 VVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYKTIVF 488
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 285 bits (730), Expect = 5e-92
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 22/442 (4%)
Query: 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES-LGE 125
+ + A+EAF + + R L+ + + N ++++ + + GK S E
Sbjct: 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEE 61
Query: 126 VVYANSFVDWFSEEARRTYGE---LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITR 182
V + +D +E + + +L + EPLGVV +I WN+P + +
Sbjct: 62 VAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQ 121
Query: 183 KVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCT 242
+ A+AAG ++KP+E + A N+ + +LL
Sbjct: 122 PMVGAVAAGNAVILKPSEVSGHMADL----LATLIPQYMDQNLYLVVKGGVPETTELLK- 176
Query: 243 SPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF 302
I +TGST VGKI+ + ++ + ++LELGG +P V + +L A KF
Sbjct: 177 -ERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235
Query: 303 RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362
N GQ CVA + L + +Q VE LK + + + + G +IN ++V
Sbjct: 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDFYGE---DAKQSRDYGRIINDRHFQRV 292
Query: 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKT 422
++ + + + APTIL ++ P EE+FGPV + ++
Sbjct: 293 KGLIDNQKVAHGGTWDQSSR-------YIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRS 345
Query: 423 EEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII--SHTEAAFGGVKE 480
EE++ N LA Y F+N+ ++ + G V N+ I+ + FGGV
Sbjct: 346 LEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGN 405
Query: 481 SGLGREGSRHGMEEFTQIKYMC 502
SG+G + E F+ +
Sbjct: 406 SGMGAYHGKKSFETFSHRRSCL 427
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Score = 186 bits (472), Expect = 1e-53
Identities = 81/484 (16%), Positives = 156/484 (32%), Gaps = 40/484 (8%)
Query: 41 SSKKFPVYNPANDEHLAD-VPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKE 99
+ F N E L P +V A +A + + + +R +L+ E
Sbjct: 1 TDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASE 60
Query: 100 LEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP--------SP 151
LE + E+ P GE+ + + F++ +P
Sbjct: 61 LEARSDDIIARAHLETALPEVRLTGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAP 120
Query: 152 VKSKELLMVREPLGVVGLITPWNFPM--AMITRKVAPALAAGCTCVIKPAEDTPLTALAL 209
+ ++ + LG V + NFP+ + A ALAAGC ++K P T+ +
Sbjct: 121 LPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIV 180
Query: 210 AALAHEAQI-PKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268
A +A + + T + N ++G+ L + P + + FTGS G+ L++ +
Sbjct: 181 AECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240
Query: 269 IKRLSL--ELGGNAPFIVYSNANLQKA--VSGAMAAKFRNCGQACVAANRFLIQEQVFDQ 324
+ + ELG P ++ +A KA +A+ CGQ C Q
Sbjct: 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQ 300
Query: 325 FVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVT 384
+ + L P I + +V S D + + +
Sbjct: 301 AFIETAQSLIRQQSP-------STLLTPGIRDSYQSQVVSRGSDDG-----IDVTFSQAE 348
Query: 385 KLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTN 444
+ + EE+FGP ++ + + + L ++ L
Sbjct: 349 SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHAT 408
Query: 445 --DISQAWRVGKKLQ--VGMVGIN-------EGIISHTEAAFGGVKESGLGREGSRHGME 493
D Q ++ +L+ G + N G + S +
Sbjct: 409 EEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSA-STSVGAEAIH 467
Query: 494 EFTQ 497
+ +
Sbjct: 468 RWLR 471
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Score = 159 bits (402), Expect = 2e-44
Identities = 57/457 (12%), Positives = 125/457 (27%), Gaps = 64/457 (14%)
Query: 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLG 124
+++ +EA++ T +E+ +K+ ++L+ ++ + E + K +
Sbjct: 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK 60
Query: 125 E------------VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITP 172
E + + + + +
Sbjct: 61 ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPI-GII 119
Query: 173 WNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTN 232
+ + AL +G T +++ D + A+ + EA + N
Sbjct: 120 YESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIEN 179
Query: 233 ANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQK 292
+ L+ + + G L S LE G I + K
Sbjct: 180 TD--RSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLK 237
Query: 293 AVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGP 352
+ C AA + L+ E++ +F+ ++ E+ K
Sbjct: 238 KAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRK----------------- 280
Query: 353 LINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFG 412
G ++ P ++ D E
Sbjct: 281 -------------------------HGVEVRGCEKTREIVPDVVPATEDDW---PTEYLD 312
Query: 413 PVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTE 472
+ K +E++ +TG + T + S A + ++ V +N
Sbjct: 313 LIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDG 372
Query: 473 AAFGGVKESGLGREGS----RHGMEEFTQIKYMCFGN 505
FG E G+ + G+ E T K++ G
Sbjct: 373 GQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 436 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.2 bits (215), Expect = 4e-19
Identities = 63/459 (13%), Positives = 130/459 (28%), Gaps = 68/459 (14%)
Query: 74 AKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMT------QESGKPPTE----SL 123
A++A + + R +L + L+ N A+ E +E+G + L
Sbjct: 12 ARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDL 71
Query: 124 GEVVYANSFVDWFSEEARR---TYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180
+ + + A + + L V L+ + P +
Sbjct: 72 FKGDKFEVMLQGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIA 131
Query: 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAH----EAQIPKGVLNVVTSSRTNANSV 236
A ++ +G ++K +++ T +A + + + Q GV V
Sbjct: 132 -NITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDV 190
Query: 237 GKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSG 296
LL ++ + GS + + + + G + +A+L KA
Sbjct: 191 SDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSIYLDEDADLIKAKRI 247
Query: 297 AMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINL 356
++ AK + ++
Sbjct: 248 SLDAKTNYPAGCNAMETLLINP---------------------------KFSKWWEVLEN 280
Query: 357 AQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAV 416
+E +I K A K+ +LG A T + + +E
Sbjct: 281 LTLEGGVTIHATKDLKTA----YFDKLNELGKLTEAIQCKTVDADEEQDFDKEFLSLDLA 336
Query: 417 CIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFG 476
+ E ++ N ++ T + + A + K + V N + T A G
Sbjct: 337 AKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWN----ASTRFADG 392
Query: 477 GVKESGLGRE-----GSRH-----GMEEFTQIKYMCFGN 505
G G E H G++ +Y G+
Sbjct: 393 F--RYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 507 | |||
| d1bxsa_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Sheep (O | 100.0 | |
| d1o04a_ | 494 | Aldehyde reductase (dehydrogenase), ALDH {Human (H | 100.0 | |
| d1a4sa_ | 503 | Aldehyde reductase (dehydrogenase), ALDH {Baltic c | 100.0 | |
| d1wnda_ | 474 | Putative betaine aldehyde dehydrogenase YdcW {Esch | 100.0 | |
| d1uzba_ | 516 | 1-pyrroline-5-carboxylate dehydrogenase {Thermus t | 100.0 | |
| d1ky8a_ | 499 | Non-phosphorylating glyceraldehyde-3-phosphate deh | 100.0 | |
| d1euha_ | 474 | Aldehyde reductase (dehydrogenase), ALDH {Streptoc | 100.0 | |
| d1ad3a_ | 446 | Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat | 100.0 | |
| d1ez0a_ | 504 | Aldehyde reductase (dehydrogenase), ALDH {Vibrio h | 100.0 | |
| d1o20a_ | 414 | Gamma-glutamyl phosphate reductase {Thermotoga mar | 100.0 | |
| d1vlua_ | 436 | Gamma-glutamyl phosphate reductase {Baker's yeast | 100.0 | |
| d1k75a_ | 431 | L-histidinol dehydrogenase HisD {Escherichia coli | 97.77 |
| >d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Sheep (Ovis aries) [TaxId: 9940]
Probab=100.00 E-value=4.7e-106 Score=851.11 Aligned_cols=471 Identities=36% Similarity=0.595 Sum_probs=446.9
Q ss_pred cCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHHH
Q psy3132 27 STYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKELE 101 (507)
Q Consensus 27 ~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l~ 101 (507)
+...++||||+|+.+.++ ++++||+||+++++++.++.+|++.|+++|++||+ .|++++.++|+++|++++++|+
T Consensus 11 ~~~~~~yI~G~w~~~~s~~~~~v~nP~t~e~i~~v~~a~~~dvd~Av~aA~~Af~a~~~W~~~s~~eR~~iL~kia~~L~ 90 (494)
T d1bxsa_ 11 FKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIE 90 (494)
T ss_dssp CCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHH
T ss_pred cCcCCEEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHHH
Confidence 345589999999976543 99999999999999999999999999999999996 6999999999999999999999
Q ss_pred hcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhH
Q psy3132 102 GNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMI 180 (507)
Q Consensus 102 ~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 180 (507)
+++++|++++++|+|||..++. .|+..+++.+++++.+.++..+...+. ..+...++.++|+|||++|+|||||+.++
T Consensus 91 ~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 169 (494)
T d1bxsa_ 91 RDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM-DGNFFTYTRSEPVGVCGQIIPWNFPLLMF 169 (494)
T ss_dssp HTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHHH
T ss_pred hCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecC-CCCceeEEEEccEEEEEEEeCccchhHHH
Confidence 9999999999999999999865 688999999999999988876655443 34677889999999999999999999999
Q ss_pred HhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHH
Q psy3132 181 TRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKI 260 (507)
Q Consensus 181 ~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~ 260 (507)
++++++||++||+||+|||+.+|+++.+|.+++.++|+|+|++|+|+|+ +.++++.|++||+|+.|.||||+.+|+.
T Consensus 170 ~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~---~~~~~~~l~~~p~v~~i~fTGS~~~g~~ 246 (494)
T d1bxsa_ 170 LWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGY---GPTAGAAISSHMDVDKVAFTGSTEVGKL 246 (494)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSC---TTTHHHHHHTCTTCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCC---chHHHHHHHhCCCcCEEEecCCHHHHHH
Confidence 9999999999999999999999999999999999999999999999985 6788999999999999999999999999
Q ss_pred HHHhhcc-cccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhcccc
Q psy3132 261 LYSHCSQ-GIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQ 339 (507)
Q Consensus 261 i~~~~~~-~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~ 339 (507)
|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++
T Consensus 247 i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l~~~~~~-~~~ 325 (494)
T d1bxsa_ 247 IKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKK-YVL 325 (494)
T ss_dssp HHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTC-CCB
T ss_pred HHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHHHhhhhh-eee
Confidence 9998885 68999999999999999999999999999999999999999999999999999999999999999999 999
Q ss_pred CCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 340 GDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 340 g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
|+|.+++ +++||++++.+++++.+++++|+++|+++++||..... .|+|++|||+.++++++++++||+||||++|++
T Consensus 326 g~~~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~FGPvl~v~~ 403 (494)
T d1bxsa_ 326 GNPLTPG-VSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGN-KGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMK 403 (494)
T ss_dssp SCTTSTT-CCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECS-SSCEECCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred eccCCCC-CcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCC-CceeEcCEEEeCCCCCcHHHhccccCceEEEEE
Confidence 9999999 99999999999999999999999999999999987654 699999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.+|+++||+.|
T Consensus 404 ~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~k 483 (494)
T d1bxsa_ 404 FKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVK 483 (494)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEE
T ss_pred ECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCCcCCCCCcCccccccCChhhHHHHHHHhcceE
Confidence 99999999999999999999999999999999999999999999998777788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 484 ~i~~~ 488 (494)
T d1bxsa_ 484 TVTIK 488 (494)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99986
|
| >d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Human (Homo sapiens), mitochondrial [TaxId: 9606]
Probab=100.00 E-value=2.5e-105 Score=845.07 Aligned_cols=473 Identities=34% Similarity=0.542 Sum_probs=448.2
Q ss_pred ccCCcceeECCEeeeCCCC--ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH---HhhcCCHHHHHHHHHHHHHHH
Q psy3132 26 LSTYTQAYINGEWVHSSKK--FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE---QWSQTTPKERGIVLKRWLKEL 100 (507)
Q Consensus 26 ~~~~~~~~I~G~~~~~~~~--~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~---~w~~~~~~~R~~~L~~~a~~l 100 (507)
++...++||||+|+.+.++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+++++++|+++|+++++.|
T Consensus 10 ~~~~~~~~I~G~w~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~Af~~~~~W~~~~~~eRa~iL~~~a~~l 89 (494)
T d1o04a_ 10 EVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLI 89 (494)
T ss_dssp CCCCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHH
T ss_pred ccccCCeEECCEecCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhccchhhcCCHHHHHHHHHHHHHHH
Confidence 3556789999999986543 99999999999999999999999999999999995 699999999999999999999
Q ss_pred HhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHh
Q psy3132 101 EGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAM 179 (507)
Q Consensus 101 ~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 179 (507)
++++++|++++++|+|||..++. .|+..++..+++++.++.+..+...+. ..+...+++++|+|||++|+|||||+.+
T Consensus 90 ~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~P~N~P~~~ 168 (494)
T d1o04a_ 90 ERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPI-DGDFFSYTRHEPVGVCGQIIPWNFPLLM 168 (494)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECC-SSSEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceecc-CCCceeEEEEecccEEEEECCcccHHHH
Confidence 99999999999999999999985 699999999999999988876655443 3456788899999999999999999999
Q ss_pred HHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHH
Q psy3132 180 ITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGK 259 (507)
Q Consensus 180 ~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~ 259 (507)
+++++++||++||+||+|||+.+|.++.+|.+++.++|+|+|++|+|+|+ +.++++.|+.||+|+.|.||||+.+|+
T Consensus 169 ~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~---~~~~g~~L~~~~~v~~v~fTGS~~~g~ 245 (494)
T d1o04a_ 169 QAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF---GPTAGAAIASHEDVDKVAFTGSTEIGR 245 (494)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBC---TTTHHHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCC---ChHHHHHHhhCCCcCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999999999999985 678999999999999999999999999
Q ss_pred HHHHhhc-ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccc
Q psy3132 260 ILYSHCS-QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFI 338 (507)
Q Consensus 260 ~i~~~~~-~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 338 (507)
.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++.|++++.+ ++
T Consensus 246 ~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l~~~~~~-~~ 324 (494)
T d1o04a_ 246 VIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKS-RV 324 (494)
T ss_dssp HHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHH-CC
T ss_pred HHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHHHHHhhh-ee
Confidence 9998776 789999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeE
Q psy3132 339 QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCI 418 (507)
Q Consensus 339 ~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~ 418 (507)
+|+|.+++ +++|||+++.+++++.+++++|+++|+++++||..... .|+|++|||+.++++++++++||+||||++|+
T Consensus 325 ~g~p~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~-~g~~~~Ptvl~~~~~~~~~~~eE~FGPvl~v~ 402 (494)
T d1o04a_ 325 VGNPFDSK-TEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAAD-RGYFIQPTVFGDVQDGMTIAKEEIFGPVMQIL 402 (494)
T ss_dssp BCCTTSTT-CSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCS-SSSCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred ecCccccc-CccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCC-CCceEcCEEEeCCCCCCHHHhccccCceEEEE
Confidence 99999999 99999999999999999999999999999999987654 68999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhc
Q psy3132 419 KFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQI 498 (507)
Q Consensus 419 ~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~ 498 (507)
+|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+||++....+.+||||+|.||+|+++|.++|++||+.
T Consensus 403 ~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~~~SG~G~~~g~~~~~~ft~~ 482 (494)
T d1o04a_ 403 KFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEV 482 (494)
T ss_dssp EECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEE
T ss_pred EeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcccccCCchhHHHHHHHhcCe
Confidence 99999999999999999999999999999999999999999999998877778899999999999999999999999999
Q ss_pred eEEEecc
Q psy3132 499 KYMCFGN 505 (507)
Q Consensus 499 k~v~~~~ 505 (507)
|+|++++
T Consensus 483 k~v~~~~ 489 (494)
T d1o04a_ 483 KTVTVKV 489 (494)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 9999874
|
| >d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Baltic cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=2.7e-104 Score=837.65 Aligned_cols=470 Identities=35% Similarity=0.572 Sum_probs=446.8
Q ss_pred CCcceeECCEeeeCCCC--c-cccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcH
Q psy3132 28 TYTQAYINGEWVHSSKK--F-PVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNK 104 (507)
Q Consensus 28 ~~~~~~I~G~~~~~~~~--~-~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~ 104 (507)
....+||||+|+++.++ + +++||+||+++++++.++.+|+++|+++|++||+.|++++..+|+++|+++++.|++++
T Consensus 18 ~~~~n~I~G~~v~~~~g~~~~~V~nP~tge~i~~v~~a~~~dV~~AV~aA~~A~~~W~~~s~~eR~~iL~~~a~~L~~~~ 97 (503)
T d1a4sa_ 18 TDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSRVMLEAARIIRERR 97 (503)
T ss_dssp CSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCCCeEECCEEeCCCCCCeeeeeecCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhH
Confidence 34568999999987543 4 68999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhH
Q psy3132 105 QALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKV 184 (507)
Q Consensus 105 ~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 184 (507)
++|++++++|+|||..+++.|+..+++.+++++...++..+.... ...+...++.++|+|||++|+|||||+...++++
T Consensus 98 eela~~~~~etGkp~~ea~~ev~~~~~~l~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~p~NfP~~~~~~~~ 176 (503)
T d1a4sa_ 98 DNIAKLEVINNGKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQ-LPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKC 176 (503)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHGGGCCEEEEE-CGGGCEEEEEEEECSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHhhhhcchhhhhhhhhhhhcccccccccccccccccc-cCCCcccccccccceeeecccCCCChHHHHHHHH
Confidence 999999999999999999999999999999999988876654433 2346678999999999999999999999999999
Q ss_pred HhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHh
Q psy3132 185 APALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSH 264 (507)
Q Consensus 185 ~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~ 264 (507)
++||++||+||+|||+.+|+++.++++++.++|+|+|++|+|+| +.++++.|++||+|++|.||||+.+|+.|++.
T Consensus 177 ~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g----~~e~g~~L~~~~~v~~V~fTGS~~~G~~i~~~ 252 (503)
T d1a4sa_ 177 APALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQG----GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEM 252 (503)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCC----SHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecC----CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 56899999999999999999999999999999
Q ss_pred hcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCC
Q psy3132 265 CSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSK 344 (507)
Q Consensus 265 ~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~ 344 (507)
+++++||+++|||||||+||++|||++.|++.+++++|.++||.|++++|+|||++++++|+++|.+.+++ +++|+|.+
T Consensus 253 aa~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~-~~~g~~~~ 331 (503)
T d1a4sa_ 253 SAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKA-IVVGDPLL 331 (503)
T ss_dssp HHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHT-CCBSCTTS
T ss_pred hhhcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHHHhhhh-Eeeccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCcccc-----CCCceeeceEeecCCCCCCCcccceeeccEEeEe
Q psy3132 345 NDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTK-----LGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIK 419 (507)
Q Consensus 345 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~ 419 (507)
+. +++||++++.+++++++++++++.+|+++++||..... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 332 ~~-~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~ 410 (503)
T d1a4sa_ 332 TE-TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLP 410 (503)
T ss_dssp TT-CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred cc-cccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHhccccCceEEEEE
Confidence 99 99999999999999999999999999999999975321 3689999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhce
Q psy3132 420 FKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIK 499 (507)
Q Consensus 420 ~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k 499 (507)
|+|.||||+++|+++|||++||||+|...++++++++++|+|+||++....+.+||||+|.||+|+++|++++++||+.|
T Consensus 411 ~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~t~~k 490 (503)
T d1a4sa_ 411 FDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLK 490 (503)
T ss_dssp ECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEE
T ss_pred cCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCccCcccCcCCcchHHHHHHHhhCeE
Confidence 99999999999999999999999999999999999999999999998877788999999999999999999999999999
Q ss_pred EEEec
Q psy3132 500 YMCFG 504 (507)
Q Consensus 500 ~v~~~ 504 (507)
+|+++
T Consensus 491 ~v~~~ 495 (503)
T d1a4sa_ 491 TVIVE 495 (503)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99886
|
| >d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Putative betaine aldehyde dehydrogenase YdcW species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.5e-104 Score=830.17 Aligned_cols=469 Identities=36% Similarity=0.590 Sum_probs=435.4
Q ss_pred CcceeECCEeeeCCCC-ccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHH
Q psy3132 29 YTQAYINGEWVHSSKK-FPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQAL 107 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~-~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 107 (507)
+.++||||+|+.++.. ++++||+||+++++++.++.+|+++|+++|++||+.|++++.++|.++|+++++.|++++++|
T Consensus 2 ~~~l~I~G~~v~~~g~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el 81 (474)
T d1wnda_ 2 QHKLLINGELVSGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLADVIEENGQVF 81 (474)
T ss_dssp CCCEEETTEEECCCSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCccEECCeEeCCCCCeeeeECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHH
Confidence 4689999999976544 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCChhhhhHh-HHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHh
Q psy3132 108 AEIMTQESGKPPTESLGE-VVYANSFVDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAP 186 (507)
Q Consensus 108 ~~~~~~e~Gk~~~~a~~e-v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 186 (507)
+++++.|+|||..++..+ +..+...+++++...........+...++...+++++|+|||++|+|||||+.+.++++++
T Consensus 82 a~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~a~ 161 (474)
T d1wnda_ 82 AELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 161 (474)
T ss_dssp HHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccceEEEeecchHhhhhhccHHH
Confidence 999999999999999754 4555566666666544433333333345678899999999999999999999999999999
Q ss_pred HhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhc
Q psy3132 187 ALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCS 266 (507)
Q Consensus 187 ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~ 266 (507)
||++||+||+|||+.+|+++..++++++++ +|+|++|+|+|+ +.++++.|++||+|++|.||||+.+|+.|.+.++
T Consensus 162 ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~~-lP~gv~~~v~g~---~~~~g~~L~~~p~i~~v~fTGS~~~G~~i~~~a~ 237 (474)
T d1wnda_ 162 ALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGR---GKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 237 (474)
T ss_dssp HHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCC---TTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHhCCCEEEeCCCcCcHHHHHHHHHHHHh-CCCCcEEEEeCC---cHHHHHHHHhCCCcCEEEeeCCHHHHHHHHHhhh
Confidence 999999999999999999999999999875 999999999985 6788999999999999999999999999999999
Q ss_pred ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCC
Q psy3132 267 QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKND 346 (507)
Q Consensus 267 ~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~ 346 (507)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|++++++ +++|+|.+++
T Consensus 238 ~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~l~~~~~~-l~~G~~~~~~ 316 (474)
T d1wnda_ 238 SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVAT-LKSGAPDDES 316 (474)
T ss_dssp GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHT-CCBCCTTSTT
T ss_pred cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhhhHHHHHh-hccCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCeE-EeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHH
Q psy3132 347 KCNLGPLINLAQVEKVDSIVQDAISKGAKV-ILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEE 425 (507)
Q Consensus 347 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v-~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~e 425 (507)
+++||++++.+.+++.+++++++.+|+.. +.|+.... ..|+|+.|||+.++++++++++||+||||++|++|+|.||
T Consensus 317 -~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~-~~g~~~~Ptil~~~~~~~~~~~eE~FGPVl~v~~~~~~de 394 (474)
T d1wnda_ 317 -TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQ 394 (474)
T ss_dssp -CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred -ceecccccccccchHHHHHHHHHHCCCeEEEeCCcccC-CCceEEeeeEeecccccccceeecccCCeEEEEEeCCHHH
Confidence 99999999999999999999999999854 55555443 3689999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 426 SLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 426 ai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 395 ai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~gl~~~t~~k~v~i~ 473 (474)
T d1wnda_ 395 VVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 473 (474)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCCccCCCCcccccccccCccCHHHHHHHcCCEEEEEEe
Confidence 9999999999999999999999999999999999999999877778899999999999999999999999999999986
|
| >d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: 1-pyrroline-5-carboxylate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.2e-101 Score=821.06 Aligned_cols=494 Identities=27% Similarity=0.429 Sum_probs=451.9
Q ss_pred ccc-cCcccchHHhhHHHHHhhhcc-----CCcceeECCEeeeCCCCccccCCC-CCCeeEEecCCCHHHHHHHHHHHHH
Q psy3132 4 FSC-LGYSVTVKQMHMKYLQKLCLS-----TYTQAYINGEWVHSSKKFPVYNPA-NDEHLADVPDMGVEDVQYAIMSAKE 76 (507)
Q Consensus 4 ~~~-~g~~~~~~~~~~~~~~~~~~~-----~~~~~~I~G~~~~~~~~~~~~~P~-tg~~i~~v~~~~~~~v~~av~~A~~ 76 (507)
|.| --.|++..+......+++.++ ..+++||||+|+.+++.+.++||. ||+++++++.++.+|+++|+++|++
T Consensus 6 ~~nep~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~I~G~~v~s~~~~~~~nP~~tge~i~~~~~a~~~dv~~Av~aA~~ 85 (516)
T d1uzba_ 6 FRNEPIETFQTEEARRAMREALRRVREEFGRHYPLYIGGEWVDTKERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWK 85 (516)
T ss_dssp CCCCCCCCCCSHHHHHHHHHHHHHHHHTTTEEECEEETTEEECCSSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHHhcCCCCCeEEcCEEECCCCCeEEeCCCCCCeEEEEEcCCCHHHHHHHHHHHHH
Confidence 444 345666666666666666652 245899999999887678899985 7999999999999999999999999
Q ss_pred HhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCccc-cCCCCCc
Q psy3132 77 AFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELV-PSPVKSK 155 (507)
Q Consensus 77 a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~ 155 (507)
||+.|+++|.++|+++|+++++.|++++++|++++++|+|||..+++.|+..+++.+++++..+....+... .....+.
T Consensus 86 A~~~W~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 165 (516)
T d1uzba_ 86 AFKTWKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASADVAEAIDFIEYYARAALRYRYPAVEVVPYPGE 165 (516)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTE
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccchhHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999998887655432 2223466
Q ss_pred eeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchH
Q psy3132 156 ELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANS 235 (507)
Q Consensus 156 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~ 235 (507)
..+.+++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+|+|+ +.+
T Consensus 166 ~~~~~~~P~Gvv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~---~~~ 242 (516)
T d1uzba_ 166 DNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGV---GEE 242 (516)
T ss_dssp EEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCS---SSH
T ss_pred ceeEEeeccCccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCC---hHH
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999985 678
Q ss_pred HHHhhhcCCCccEEEEeCCHHHHHHHHHhhc------ccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCc
Q psy3132 236 VGKLLCTSPHVAGISFTGSTQVGKILYSHCS------QGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQAC 309 (507)
Q Consensus 236 ~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~------~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C 309 (507)
+++.|++||+|++|.||||+.+|+.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|
T Consensus 243 ~~~~L~~hp~v~~I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C 322 (516)
T d1uzba_ 243 VGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKC 322 (516)
T ss_dssp HHHHHHTCTTCCEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCST
T ss_pred HHHHHHhCCCcCEEecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcc
Confidence 9999999999999999999999999999887 6789999999999999999999999999999999999999999
Q ss_pred ccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCc
Q psy3132 310 VAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSK 389 (507)
Q Consensus 310 ~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~ 389 (507)
++++|+|||++++|+|++++++++++ +++| |.+++ +++||++++.+++++++++++|+++|+.+ +||...+. .|+
T Consensus 323 ~a~~ri~v~~~i~d~~~~~~~~~~~~-l~~g-~~~~~-~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~-~g~ 397 (516)
T d1uzba_ 323 SAASRLILTQGAYEPVLERVLKRAER-LSVG-PAEEN-PDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEG-EGY 397 (516)
T ss_dssp TCEEEEEEEHHHHHHHHHHHHHHHTT-CCBS-CGGGC-CSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSS-SSC
T ss_pred cccCccccccccccchhhHHHHHHHh-cccC-CCccc-CccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCC-CCc
Confidence 99999999999999999999999999 9999 55777 99999999999999999999999888765 56655443 699
Q ss_pred eeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC
Q psy3132 390 FFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS 469 (507)
Q Consensus 390 ~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~ 469 (507)
|+.|||+.++++++++++||+||||++|++|+|.||||+++|+++|||++||||+|.+.++++++++++|+|+||+++..
T Consensus 398 ~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~ 477 (516)
T d1uzba_ 398 FIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITG 477 (516)
T ss_dssp CBCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred eECCEEEecCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred --CCCCcccCCCCCCCCCCc-hHHHHHhchhceEEEecc
Q psy3132 470 --HTEAAFGGVKESGLGREG-SRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 470 --~~~~pfGG~~~SG~g~~~-g~~~l~~~t~~k~v~~~~ 505 (507)
.+.+||||+|.||+|+++ |.+++++||+.|+|+.+|
T Consensus 478 ~~~~~~PfGG~k~SG~G~~~G~~~~l~~~~~~k~v~~r~ 516 (516)
T d1uzba_ 478 ALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMKAVAERF 516 (516)
T ss_dssp CCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEEEEEEEC
T ss_pred CCcCCCCCcCcccccCCcccchHHHHHHhCCeeeEEEcC
Confidence 467999999999999985 589999999999998765
|
| >d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN species: Archaeon Thermoproteus tenax [TaxId: 2271]
Probab=100.00 E-value=4.9e-96 Score=775.76 Aligned_cols=471 Identities=28% Similarity=0.435 Sum_probs=434.9
Q ss_pred hhccCCcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhH-HhhcCCHHHHHHHHHHHHHHHHh
Q psy3132 24 LCLSTYTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFE-QWSQTTPKERGIVLKRWLKELEG 102 (507)
Q Consensus 24 ~~~~~~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~-~w~~~~~~~R~~~L~~~a~~l~~ 102 (507)
...++.+++||||+|+.++..++++||.||+.+++++.++.+|++.|+++|++|++ .|+.+|.++|+++|+++++.|++
T Consensus 11 ~~~~~~~~~~I~G~~~~sg~~~~v~~P~t~~~i~~v~~a~~~dv~~Av~~A~~a~~~~w~~~~~~~R~~iL~~~a~~l~~ 90 (499)
T d1ky8a_ 11 KGGVPVYPSYLAGEWGGSGQEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRKAADIIER 90 (499)
T ss_dssp ETTEEEECEECSSSEECCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCEECCeECCCCCeEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHhchhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 33456789999999998766699999999999999999999999999999988887 79999999999999999999999
Q ss_pred cHHHHHHHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCcccc----CCCCCceeEEEeecccEEEEEcCCcccHH
Q psy3132 103 NKQALAEIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGELVP----SPVKSKELLMVREPLGVVGLITPWNFPMA 178 (507)
Q Consensus 103 ~~~~l~~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~ 178 (507)
++++|++++++|+|||..+++.|+..+++.+++++...++..+.... ....+...+++|+|+|||++|+|||||+.
T Consensus 91 ~~~~la~~~~~etGk~~~~a~~Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~N~P~~ 170 (499)
T d1ky8a_ 91 NLDVFAEVLVMNAGKPKSAAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLF 170 (499)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhhhhhcccccccchhhhhhhhhhceeccccccccccccceeeeeccccccccccccccch
Confidence 99999999999999999999999999999999999888776554321 12235677899999999999999999999
Q ss_pred hHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHH
Q psy3132 179 MITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVG 258 (507)
Q Consensus 179 ~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g 258 (507)
++++++++||++||+||+|||+.+|+++..+.+++.++|+|+++++++.++ .+.+..|++|+.++.+.||||+.++
T Consensus 171 ~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~----~~~~~~l~~~~~i~~v~ftGs~~~g 246 (499)
T d1ky8a_ 171 DAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLP----GKEAEKIVADDRVAAVSFTGSTEVG 246 (499)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCC----GGGGHHHHHCTTCCEEEEESCHHHH
T ss_pred hhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCC----hHHHHHHhhccceeEEEeecccccc
Confidence 999999999999999999999999999999999999999999999999974 4567889999999999999999999
Q ss_pred HHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccc
Q psy3132 259 KILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFI 338 (507)
Q Consensus 259 ~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 338 (507)
+.+++.++ .+|+++|+|||||+||++|||++.|++.+++++|.++||.|++++|+|||++++|+|+++|++++++ ++
T Consensus 247 ~~i~~~~~--~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f~~~l~~~~~~-l~ 323 (499)
T d1ky8a_ 247 ERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSS-LR 323 (499)
T ss_dssp HHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHT-CC
T ss_pred eEEeeccc--ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHHHHHHHHHHHh-Cc
Confidence 99998875 5899999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred cCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceE---eecCCCCCCCcccceeeccE
Q psy3132 339 QGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTI---LTNITPDMLCYTEEVFGPVA 415 (507)
Q Consensus 339 ~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptv---l~~~~~~~~i~~~E~fgPvl 415 (507)
+|+|.+++ +++||++++.+++++++++++|+.+|++++.||.... ..+..+++ ..++.+|+++++||+||||+
T Consensus 324 ~G~p~~~~-~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~---~~~~~~~~~~~~~~~~~d~~~~~eE~FGPvl 399 (499)
T d1ky8a_ 324 VGDPRDPT-VDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG---PTYVQPTLVEAPADRVKDMVLYKREVFAPVA 399 (499)
T ss_dssp BSCTTSTT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEE---TTEECCEEEECCHHHHTTSHHHHSCCCSSEE
T ss_pred cCCCCCcc-ccccccchHHHHHHHHHHHHHHHHcCCEEeeeecccc---ccccccccccccccCCCCChhhhccccCceE
Confidence 99999999 9999999999999999999999999999999998764 23333333 34456799999999999999
Q ss_pred EeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCCC-CCCCcccCCCCCCCCCCchHHHHHh
Q psy3132 416 VCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGIIS-HTEAAFGGVKESGLGREGSRHGMEE 494 (507)
Q Consensus 416 ~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~-~~~~pfGG~~~SG~g~~~g~~~l~~ 494 (507)
+|++|+|.|||++++|+++|||++||||+|.+.++++++++++|+|+||+.+.. .+.+||||+|.||+|+++|.+|+++
T Consensus 400 ~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~ 479 (499)
T d1ky8a_ 400 SAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEA 479 (499)
T ss_dssp EEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHH
T ss_pred EEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCccccccCcCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999997764 4789999999999999999999999
Q ss_pred chhceEEEecc
Q psy3132 495 FTQIKYMCFGN 505 (507)
Q Consensus 495 ~t~~k~v~~~~ 505 (507)
||+.|+|++++
T Consensus 480 ~~~~k~i~~~~ 490 (499)
T d1ky8a_ 480 VTAYKTIVFNY 490 (499)
T ss_dssp HEEEEEEEEEC
T ss_pred hhCEEEEEEcC
Confidence 99999999864
|
| >d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Streptococcus mutans [TaxId: 1309]
Probab=100.00 E-value=1.3e-92 Score=746.74 Aligned_cols=464 Identities=32% Similarity=0.536 Sum_probs=433.9
Q ss_pred CcceeECCEeeeCCCCccccCCCCCCeeEEecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHH
Q psy3132 29 YTQAYINGEWVHSSKKFPVYNPANDEHLADVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALA 108 (507)
Q Consensus 29 ~~~~~I~G~~~~~~~~~~~~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~ 108 (507)
.+++||||+|+.+.+.++++||+||+++++++.++.+|+++|+++|++|++.|+++|.++|.++|+++++.|++++++|+
T Consensus 3 ~~~n~I~G~~~~~~~~~~v~~P~tg~~i~~~~~a~~~dv~~Ai~~A~~A~~~W~~~s~~~R~~iL~~~a~~L~~~~~~la 82 (474)
T d1euha_ 3 QYKNYVNGEWKLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKVADILMRDKEKIG 82 (474)
T ss_dssp BCCEEETTEEECCSSEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cccceecCeecCCCCCEEEeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHhHHHhhCCHHHHHHHHHHHHHHHHHhHHHHH
Confidence 56899999999877669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCChhhhhHhHHHHHHHHHHHHHHHHHhcCc-----cccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhh
Q psy3132 109 EIMTQESGKPPTESLGEVVYANSFVDWFSEEARRTYGE-----LVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRK 183 (507)
Q Consensus 109 ~~~~~e~Gk~~~~a~~ev~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 183 (507)
+++++|+|||..+++.|+...+..++++.......... ..+....+...+++++|+|||++|+|||||+...++.
T Consensus 83 ~~~~~e~Gk~~~~a~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P~GVV~~I~p~n~P~~~~~~~ 162 (474)
T d1euha_ 83 AILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSK 162 (474)
T ss_dssp HHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTHHHHHH
T ss_pred HHHHHHhCCCcchhccccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEeeceeEEEEeccccccchhhhhh
Confidence 99999999999999999999999999988876554321 1112234566788999999999999999999999999
Q ss_pred HHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHH
Q psy3132 184 VAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYS 263 (507)
Q Consensus 184 l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~ 263 (507)
+++||++||+||+|||+.+|.++.++.++|.++|+|+|++|+|+++ +.++++.|+.||+|+.|.||||+.+++.+.+
T Consensus 163 ~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~---~~~~~~~L~~~~~v~~v~ftGs~~~~~~i~~ 239 (474)
T d1euha_ 163 IAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGR---GSEIGDYIVEHQAVNFINFTGSTGIGERIGK 239 (474)
T ss_dssp HHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCC---HHHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred chhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCC---hHHHHHHHHhCCCccEEEecCccccccchhh
Confidence 9999999999999999999999999999999999999999999985 6789999999999999999999999999999
Q ss_pred hhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCC
Q psy3132 264 HCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 264 ~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
.++ .||+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||++++++|++.++++... ++.|++.
T Consensus 240 ~a~--~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~l~~~~~~-~~~~~~~ 316 (474)
T d1euha_ 240 MAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLA-LTIGNPE 316 (474)
T ss_dssp HTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHT-SCBSCGG
T ss_pred hcc--cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhhhhhHhhhhhhhh-ccccCcc
Confidence 876 6899999999999999999999999999999999999999999999999999999999999999999 9999988
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCH
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTE 423 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~ 423 (507)
+. ..++|++...+.+++.+.+..+...++..+.++.. .|+|+.|||+..+++++++++||+||||++|++|+|+
T Consensus 317 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~ 390 (474)
T d1euha_ 317 DD--ADITPLIDTKSADYVEGLINDANDKGATALTEIKR----EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 390 (474)
T ss_dssp GT--CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE----ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred cc--cccccccchHHHHHHHHHHHhhhcccccccccCCC----CCCCcCCEEEecCCCcchhhhcccCCcEEEEEEeCCH
Confidence 76 56899999999999999999999999888765543 4899999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEEEcCCCC-CCCCCcccCCCCCCCCCCchHHHHHhchhceEEE
Q psy3132 424 EESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVGINEGII-SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMC 502 (507)
Q Consensus 424 ~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~-~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~ 502 (507)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+++. ..+.+||||+|.||+|+++|++|+++||+.|+|+
T Consensus 391 deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~~~~k~v~ 470 (474)
T d1euha_ 391 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 470 (474)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCCCCCCCCccccccCccCccCHHHHHHHhCcEEEEE
Confidence 999999999999999999999999999999999999999998765 3567999999999999999999999999999998
Q ss_pred ec
Q psy3132 503 FG 504 (507)
Q Consensus 503 ~~ 504 (507)
++
T Consensus 471 ~~ 472 (474)
T d1euha_ 471 FD 472 (474)
T ss_dssp EE
T ss_pred Ee
Confidence 74
|
| >d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=6.8e-87 Score=695.27 Aligned_cols=422 Identities=27% Similarity=0.410 Sum_probs=385.3
Q ss_pred HHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhh-HhHHHHHHHHHHHHHHHHHhcC
Q psy3132 67 VQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESL-GEVVYANSFVDWFSEEARRTYG 145 (507)
Q Consensus 67 v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~~~~~~~~~~ 145 (507)
|++|+++|++||+.|+.+|.++|.++|+++++.|++++++|++++++|+|||..++. .|+..+++.++++++....+..
T Consensus 2 v~~av~~Ar~Af~~w~~~s~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~ 81 (446)
T d1ad3a_ 2 ISDTVKRAREAFNSGKTRSLQFRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAE 81 (446)
T ss_dssp HHHHHHHHHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999999999999999999999999999999999999999999996 6999999999998877665433
Q ss_pred cc---ccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHHHHHcCCCCCc
Q psy3132 146 EL---VPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAALAHEAQIPKGV 222 (507)
Q Consensus 146 ~~---~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~l~~aGlP~gv 222 (507)
.. ......+...++.++|+|||++|+|||||+..+++++++||++||+||+|||+.+|.++.++++++.+. +|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~ 160 (446)
T d1ad3a_ 82 DEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNL 160 (446)
T ss_dssp CEECCCCSTTTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTT
T ss_pred ccccccCCCCCCcceEEEeecceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccc
Confidence 21 122234567788999999999999999999999999999999999999999999999999999998775 99999
Q ss_pred EEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcEEEcCCCCHHHHHHHHHHHHH
Q psy3132 223 LNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPFIVYSNANLQKAVSGAMAAKF 302 (507)
Q Consensus 223 v~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~iV~~daDl~~aa~~i~~~~~ 302 (507)
++++.+. + .....+ .++.+|.|.||||+.+|+.|++.+++++||+++|+|||||+||++|||++.|++.+++++|
T Consensus 161 ~~~~~~~---~-~~~~~~-~~~~~~~v~fTGs~~~G~~i~~~aa~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~ 235 (446)
T d1ad3a_ 161 YLVVKGG---V-PETTEL-LKERFDHIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKF 235 (446)
T ss_dssp EEECCCS---H-HHHHHH-TTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHH
T ss_pred ccccccc---c-hhhhhh-cccccCceEEECcHHHHHHHHHHHHhcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHh
Confidence 9999873 3 334444 4568999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCc
Q psy3132 303 RNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGK 382 (507)
Q Consensus 303 ~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~ 382 (507)
.|+||.|++++|||||++++|+|+++|++.+++ + +|+|.+++ +++||++++.+.+++.++++. ++...|+..
T Consensus 236 ~~~GQ~C~a~~rv~v~~~i~~~f~~~l~~~~~~-~-~g~~~~~~-~~~gp~i~~~~~~~~~~~~~~-----a~~~~g~~~ 307 (446)
T d1ad3a_ 236 MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKD-F-YGEDAKQS-RDYGRIINDRHFQRVKGLIDN-----QKVAHGGTW 307 (446)
T ss_dssp TTTTCCTTSCCEEEECGGGHHHHHHHHHHHHHH-H-HCSCGGGC-TTSCCCSCHHHHHHHHHTTTT-----SCEEECCCE
T ss_pred cCCCCccccCCccccccchhHHHHHhhhhhhhe-e-eccccccc-ccccchhhhhhhhhhhccccc-----hhcccceee
Confidence 999999999999999999999999999999988 6 89999998 999999999999999888753 455555544
Q ss_pred cccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhcceeeEE
Q psy3132 383 VTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKLQVGMVG 462 (507)
Q Consensus 383 ~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~G~v~ 462 (507)
.. +++|+.|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+.++++++++++|+|+
T Consensus 308 ~~--~~~~~~Ptil~~v~~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~ 385 (446)
T d1ad3a_ 308 DQ--SSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT 385 (446)
T ss_dssp ET--TTTEECCEEECSCCTTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEE
T ss_pred cC--CCCCcCCEEEECCCCCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence 33 5889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCC--CCCCCcccCCCCCCCCCCchHHHHHhchhceEEEec
Q psy3132 463 INEGII--SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYMCFG 504 (507)
Q Consensus 463 iN~~~~--~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v~~~ 504 (507)
||++.. ..+.+||||+|.||+|+++|++|+++||+.|+|+++
T Consensus 386 iN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~ft~~k~v~~~ 429 (446)
T d1ad3a_ 386 ANDVIVHITVPTLPFGGVGNSGMGAYHGKKSFETFSHRRSCLVK 429 (446)
T ss_dssp ESSSSGGGGCTTSCCCCCGGGEECCCSTHHHHHHTEEEEEEEEC
T ss_pred EeCCccCCCCCCCCccccccceeccchHHHHHHHHhceeEEEEc
Confidence 998764 357899999999999999999999999999999886
|
| >d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Aldehyde reductase (dehydrogenase), ALDH species: Vibrio harveyi [TaxId: 669]
Probab=100.00 E-value=2.9e-82 Score=669.07 Aligned_cols=440 Identities=19% Similarity=0.298 Sum_probs=375.8
Q ss_pred CccccCCCCCCeeE-EecCCCHHHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhh
Q psy3132 44 KFPVYNPANDEHLA-DVPDMGVEDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTES 122 (507)
Q Consensus 44 ~~~~~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a 122 (507)
.|+++||+|||.++ .++.++.+||++|+++|++||+.|++++.++|.++|+++++.|++++++|++++++|+|||..++
T Consensus 4 ~f~~~nP~tge~l~~~~~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a 83 (504)
T d1ez0a_ 4 VFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 83 (504)
T ss_dssp EEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred eEEEECCCCCCCcchhccCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 38999999999997 79999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHHHHHHHHhcCccc--------cCCCCCceeEEEeecccEEEEEcCCcccHHhHH--hhHHhHhhcCC
Q psy3132 123 LGEVVYANSFVDWFSEEARRTYGELV--------PSPVKSKELLMVREPLGVVGLITPWNFPMAMIT--RKVAPALAAGC 192 (507)
Q Consensus 123 ~~ev~~~~~~l~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~--~~l~~ALaaGN 192 (507)
+.|+..+++.++||++..++...... .........+..++|+|||++|+|||||+...+ +++++||++||
T Consensus 84 ~~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN 163 (504)
T d1ez0a_ 84 TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGC 163 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHhhhccccccccccccccccCcccceeEEEecCceEEEEecccccchhhhhhHHHHHHHHHhc
Confidence 99999999999999998876443211 111234567788999999999999999997554 58999999999
Q ss_pred eEEeccCCCChHHHHHHH----HHHHHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhccc
Q psy3132 193 TCVIKPAEDTPLTALALA----ALAHEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQG 268 (507)
Q Consensus 193 ~Vvlkps~~~~~~~~~l~----~~l~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~ 268 (507)
+||+|||+.+|.++.++. +++.++|+|+|++|+|+|+ +.++++.|++||+|++|+||||+.+|+.|.+.++++
T Consensus 164 ~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~---~~~~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa~~ 240 (504)
T d1ez0a_ 164 PVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGN---QRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHER 240 (504)
T ss_dssp CEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCS---CTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHS
T ss_pred cceecCcccccchhhhhhhHHHHHhhhhccccCceeccccc---ccccccccccccccceeeeccchHHHHHHHhhhhcc
Confidence 999999999999887665 4566779999999999985 678999999999999999999999999999999999
Q ss_pred cccccc--ccCCCCcEEEcCCCCHHHHH--HHHHHHHHHhcCCCcccCcceechhhh-HHHHHHHHHHHHHhccccCCCC
Q psy3132 269 IKRLSL--ELGGNAPFIVYSNANLQKAV--SGAMAAKFRNCGQACVAANRFLIQEQV-FDQFVEMLKVEITKSFIQGDTS 343 (507)
Q Consensus 269 ~~~~~l--elgG~~~~iV~~daDl~~aa--~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~~g~~~ 343 (507)
++|+.+ |||||||+||++|||++.|+ +.+++++|.|+||.|++++|+||+++. .+.|++.+++.++. +
T Consensus 241 ~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~a~~rv~v~~~~~~~~~~~~~~~~~~~----~--- 313 (504)
T d1ez0a_ 241 PEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQ----Q--- 313 (504)
T ss_dssp SSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHH----C---
T ss_pred cccccccccccccccccccccccHHHHhhhhccccchhhccCccccccccccchhhhhHHHHhhhhhhhhhh----c---
Confidence 987655 99999999999999999874 479999999999999999999987775 45677776665554 2
Q ss_pred CCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEeCCCccccCCCceeeceEee---cCCCCCCCcccceeeccEEeEec
Q psy3132 344 KNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILT---NITPDMLCYTEEVFGPVAVCIKF 420 (507)
Q Consensus 344 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~---~~~~~~~i~~~E~fgPvl~v~~~ 420 (507)
+++ +.+||+++..+++++ ++.+..+|+.++.||.. +.+..|+++. ++..++++++||+||||++|++|
T Consensus 314 ~~~-~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~ 384 (504)
T d1ez0a_ 314 SPS-TLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE-----SPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVC 384 (504)
T ss_dssp CCB-CCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC-----TTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEE
T ss_pred ccc-cccccchhhhhhhhh---hhhhhhhhhhccccccc-----ccccCCccccccccccccchhhcccccCCeeeeeec
Confidence 345 889999998887766 56667789988888764 3344444443 33456889999999999999999
Q ss_pred CCHHHHHHHHhcCCCCcEEEEecC--CHHHHHHHHhhcc--eeeEEEcCCCCC-------CCCCcccCCCCCCCCCCchH
Q psy3132 421 KTEEESLCVANNSNTGLAGYFFTN--DISQAWRVGKKLQ--VGMVGINEGIIS-------HTEAAFGGVKESGLGREGSR 489 (507)
Q Consensus 421 ~~~~eai~~~n~~~~gl~a~v~t~--d~~~~~~~~~~l~--~G~v~iN~~~~~-------~~~~pfGG~~~SG~g~~~g~ 489 (507)
+|+||||+++|+++|||++||||+ |..++.+++++|+ +|+|+||++++. .++.||||.+.||.| ..|.
T Consensus 385 ~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~~~tG~~v~~~~~~ggpf~g~~~sg~~-~~G~ 463 (504)
T d1ez0a_ 385 ENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSAST-SVGA 463 (504)
T ss_dssp SSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCC-SSSG
T ss_pred CCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcCCcccceecCcCCCCCCCCCcCCCCCC-cchH
Confidence 999999999999999999999996 5568999999986 899999986531 234588999999955 4689
Q ss_pred HHHHhchhceEEEecc
Q psy3132 490 HGMEEFTQIKYMCFGN 505 (507)
Q Consensus 490 ~~l~~~t~~k~v~~~~ 505 (507)
+++++|+++ +++++
T Consensus 464 ~~i~~f~r~--v~~q~ 477 (504)
T d1ez0a_ 464 EAIHRWLRP--VAYQA 477 (504)
T ss_dssp GGGGGGEEE--EEEES
T ss_pred HHHHHHhch--hhhcc
Confidence 999999865 44544
|
| >d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=1.2e-66 Score=538.29 Aligned_cols=388 Identities=16% Similarity=0.178 Sum_probs=309.7
Q ss_pred HHHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHcCCChhhhhHh------------HHHHHHH
Q psy3132 65 EDVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIMTQESGKPPTESLGE------------VVYANSF 132 (507)
Q Consensus 65 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~e------------v~~~~~~ 132 (507)
+|+.+++++|++||+.|+++|+++|.++|++++++|++++++|++++++|+||+..+++.| +..+++.
T Consensus 1 ee~~~a~~~A~~Af~~w~~~s~~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~e~~~~rl~~~~~~i~~~~~~ 80 (414)
T d1o20a_ 1 DELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKA 80 (414)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhccccHHHHHHHhccHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999887655 5566777
Q ss_pred HHHHHHHHHHhcCccccCCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHHHH
Q psy3132 133 VDWFSEEARRTYGELVPSPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALAAL 212 (507)
Q Consensus 133 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~~~ 212 (507)
+++++.......+..... .........++|+|++++++|||||+.++++++++||++||+||+|||+.+|.++..++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l 159 (414)
T d1o20a_ 81 CETVIGLKDPVGEVIDSW-VREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSA 159 (414)
T ss_dssp HHHHHHSCCCTTCEEEEE-ECTTSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhhhhcccccccc-ccccccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhH
Confidence 777776544433322221 1233456778899999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCC----CCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCC-cEEEcCC
Q psy3132 213 AHEAQIP----KGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNA-PFIVYSN 287 (507)
Q Consensus 213 l~~aGlP----~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~-~~iV~~d 287 (507)
+.+++.| .++++.+.++ +......+..++.+ .||||+..++.+.+.++++.+++++|+||+| ++||++|
T Consensus 160 ~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~a~~~~~~~~le~gGgn~~viv~~d 233 (414)
T d1o20a_ 160 IREALKETEIPESSVEFIENT---DRSLVLEMIRLREY---LSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDES 233 (414)
T ss_dssp HHHHHTTSSSCGGGEEECCCC---CTHHHHHHTTCTTT---CSEEEECSCHHHHHHHHHHCSSCBCCCCCCCEEEEECTT
T ss_pred HHhhhhhcccccccccccccc---chhhhhhccccccc---CeEEEcccHHHHHHHhhhccccceecccCCCCCeecccc
Confidence 8877444 4456666653 34555555554433 3334444455556666666788888888765 5788899
Q ss_pred CCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHH
Q psy3132 288 ANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQ 367 (507)
Q Consensus 288 aDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~ 367 (507)
||++.|++.+++++|.| ||.|++++|++||+++||+|+++|.+...+ ..++.+.++. .
T Consensus 234 Ad~~~A~~~~~~~~~~~-gq~C~a~~r~~V~~~i~d~f~~~l~~~~~~-~~~~~~~~~~-----------~--------- 291 (414)
T d1o20a_ 234 ADLKKAVPVIINAKTQR-PGTCNAAEKLLVHEKIAKEFLPVIVEELRK-HGVEVRGCEK-----------T--------- 291 (414)
T ss_dssp SCHHHHHHHHHHHHHSC-TTSTTSEEEEEEEHHHHHHHHHHHHHHHHH-TTCEEEECHH-----------H---------
T ss_pred cchhhhhhHHHhhhhcC-CcccccccccchhHHHHHHHHHHHhHHHHH-cCCccccchh-----------h---------
Confidence 99999999999998866 999999999999999999999999999888 5544432221 0
Q ss_pred HHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHH
Q psy3132 368 DAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDIS 447 (507)
Q Consensus 368 ~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~ 447 (507)
..+.+.+... ..+.+++|+||||++|++|+|+||||+++|+++|||++||||+|.+
T Consensus 292 ---------------------~~~~~~~~~~---~~~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~ 347 (414)
T d1o20a_ 292 ---------------------REIVPDVVPA---TEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 347 (414)
T ss_dssp ---------------------HHHSTTSEEC---CGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ---------------------hhhcccceec---ccccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHH
Confidence 0011111111 1235689999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC--CC--chHHHHHhchhceEEEecc
Q psy3132 448 QAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG--RE--GSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 448 ~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g--~~--~g~~~l~~~t~~k~v~~~~ 505 (507)
.++++++++++|.|+||+++......|||+.+.||+| +. +|++|+++||+.|+|.+++
T Consensus 348 ~a~~~~~~i~~G~V~IN~~~~~~~~~~~g~g~~~G~~~~~~~~~G~~gl~~~t~~K~vv~~~ 409 (414)
T d1o20a_ 348 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 409 (414)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHhCCeeEEEEeCCCcCCCCCCCCCCCceeccCCCCCCCchhHHHHhCeEEEEEECC
Confidence 9999999999999999988765556677776777764 33 3899999999999998864
|
| >d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: ALDH-like domain: Gamma-glutamyl phosphate reductase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.7e-55 Score=449.33 Aligned_cols=399 Identities=16% Similarity=0.147 Sum_probs=285.7
Q ss_pred HHHHHHHHHHHHhHHhhcCCHHHHHHHHHHHHHHHHhcHHHHHHHH------HHHcCCChhhh-h------HhHHHHHHH
Q psy3132 66 DVQYAIMSAKEAFEQWSQTTPKERGIVLKRWLKELEGNKQALAEIM------TQESGKPPTES-L------GEVVYANSF 132 (507)
Q Consensus 66 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~------~~e~Gk~~~~a-~------~ev~~~~~~ 132 (507)
.++++++.|++|++.|+.++.++|.++|+++++.|++++++|+++. +++.|++.... | ..+..+++.
T Consensus 4 ~~e~~~~~Ak~A~~~l~~~s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~ 83 (436)
T d1vlua_ 4 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 83 (436)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHH
Confidence 4677889999999999999999999999999999999999998854 44556553321 1 124455555
Q ss_pred HHHHHHHHHHhcCcccc--CCCCCceeEEEeecccEEEEEcCCcccHHhHHhhHHhHhhcCCeEEeccCCCChHHHHHHH
Q psy3132 133 VDWFSEEARRTYGELVP--SPVKSKELLMVREPLGVVGLITPWNFPMAMITRKVAPALAAGCTCVIKPAEDTPLTALALA 210 (507)
Q Consensus 133 l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~Vvlkps~~~~~~~~~l~ 210 (507)
++..+...++. +.... ....+...+..+.|+|||++| ||++| ..++...++||++||+||+||++.++.++..+.
T Consensus 84 l~~i~~~~dpv-g~~~~~~~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~ 160 (436)
T d1vlua_ 84 IKDVAELEDPV-GKVKMARELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMA 160 (436)
T ss_dssp HHHHHHSCCSS-SCEEEEEEEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHH
T ss_pred HHHHHhccccc-eeEeeeeeccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHH
Confidence 66555432221 11111 112456778889999999988 66777 677788999999999999999999999998887
Q ss_pred HHH--------HHcCCCCCcEEEEeCCCCCchHHHHhhhcCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCcE
Q psy3132 211 ALA--------HEAQIPKGVLNVVTSSRTNANSVGKLLCTSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAPF 282 (507)
Q Consensus 211 ~~l--------~~aGlP~gvv~~v~g~~~~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~~ 282 (507)
+++ .++|+|+++++++++ +.++++.|..|+.||.|+||||...++.+.+.+. +|++.++||++|+
T Consensus 161 ~~~~~al~~a~~~aGlP~~~i~~v~~----~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~~---~pvi~~~~G~~~~ 233 (436)
T d1vlua_ 161 KIVNDTIAQFQSETGVPVGSVQLIET----RQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTTK---IPVLGHADGICSI 233 (436)
T ss_dssp HHHHHHHHHHHHHHCCCTTSEEECCC----C--CGGGGGCTTTCCEEEEESCHHHHHHHHHTCC---SCBTTBCSCCEEE
T ss_pred HHHHHhhhhhccccCCCCceEEEecc----hhHHHHHhccCCCCceEEEecCCceeeeeecccc---ceEEEecCCccce
Confidence 765 466999999999986 4578899999999999999999999999988774 6999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCcccCcceechhhhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHH
Q psy3132 283 IVYSNANLQKAVSGAMAAKFRNCGQACVAANRFLIQEQVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKV 362 (507)
Q Consensus 283 iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~ 362 (507)
||++|||++.|++.++.++|.++|| |++.++++||+++++.|...+...... | ..+. .++......
T Consensus 234 ~Vd~~ADl~~A~~~i~~ak~~~~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~----g-------v~l~--~~~~~~~~~ 299 (436)
T d1vlua_ 234 YLDEDADLIKAKRISLDAKTNYPAG-CNAMETLLINPKFSKWWEVLENLTLEG----G-------VTIH--ATKDLKTAY 299 (436)
T ss_dssp EECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTSTTHHHHHHHHHHHH----C-------CCBE--ECHHHHHHH
T ss_pred eecccccHHHHHHHHHHHhccCCCc-cccccceeecHhhhhhhhhhHHHHHhC----C-------cEEE--eCHHHHHHh
Confidence 9999999999999999999999997 889999999999998886655444443 1 1111 122222222
Q ss_pred HHHHHHHHHCCCeEEeCCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEe
Q psy3132 363 DSIVQDAISKGAKVILGGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFF 442 (507)
Q Consensus 363 ~~~i~~a~~~Ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~ 442 (507)
... ..+. |.. .+....|++..... ..+.+|.|+|+++|++|+|+||||+++|+++|||+++||
T Consensus 300 ~~~----~~~~------~~~----~~~~~~~~~~~~~~---~d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~ 362 (436)
T d1vlua_ 300 FDK----LNEL------GKL----TEAIQCKTVDADEE---QDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 362 (436)
T ss_dssp HHH----HHHH------TCC----CHHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hhh----hhhc------ccc----cccccccccCCCcc---cchhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEE
Confidence 111 1111 111 12333444443322 236899999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHhhcceeeEEEcCCCCCCCCCcccCCCCCCCC----CCchHHHHHhchhceEEEecc
Q psy3132 443 TNDISQAWRVGKKLQVGMVGINEGIISHTEAAFGGVKESGLG----REGSRHGMEEFTQIKYMCFGN 505 (507)
Q Consensus 443 t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~g----~~~g~~~l~~~t~~k~v~~~~ 505 (507)
|+|.+.+++|++++++|.|+||.++.+.++.+||--.+-|+. ..+||.|++++|..|++..++
T Consensus 363 T~d~~~a~~F~~~vda~~V~vNasTrf~Dg~~~g~g~e~Gist~k~h~rGp~gl~~ltt~k~~~~g~ 429 (436)
T d1vlua_ 363 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHARGPVGLDGLVSYQYQIRGD 429 (436)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC----------------------CCSGGGEEEEEEEECS
T ss_pred ECCHHHHHHHHHhCCceEEEEcCCCccCCCCcccCcceeeEecCCCCCCCCcChHHhceEEEEEECC
Confidence 999999999999999999999999887777777733333442 238999999999999987753
|
| >d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: ALDH-like superfamily: ALDH-like family: L-histidinol dehydrogenase HisD domain: L-histidinol dehydrogenase HisD species: Escherichia coli [TaxId: 562]
Probab=97.77 E-value=0.013 Score=56.71 Aligned_cols=323 Identities=14% Similarity=0.101 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHHhcHHHHHHHHHHHcCCC----hhhhhHhHHHHHH--------HHHHHHHHHHHhcC-----ccccC
Q psy3132 88 ERGIVLKRWLKELEGNKQALAEIMTQESGKP----PTESLGEVVYANS--------FVDWFSEEARRTYG-----ELVPS 150 (507)
Q Consensus 88 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~----~~~a~~ev~~~~~--------~l~~~~~~~~~~~~-----~~~~~ 150 (507)
+-.+..+++.+.++.+.|.-....++...+- +.-...|+..+.+ .|+...+..+.+.. .....
T Consensus 28 ~v~~~V~~Ii~~Vr~~GD~AL~~yt~kFD~~~~~~l~Vs~~Ei~~A~~~l~~el~~AI~~A~~rI~~FH~~Q~~~~~~~e 107 (431)
T d1k75a_ 28 SITRTVNDILDNVKARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQKLPPVDVE 107 (431)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCCSCSBCCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHhCCCCccccccCHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhcCCCceee
Confidence 3444555666677777776666666665422 1112234443322 22333332222211 11111
Q ss_pred CCCCceeEEEeecccEEEEEcCCc-ccH-HhHHhhHHhHhhcCCe--EEeccCCCChHHHHHHHHHHHHcCCCCCcEEEE
Q psy3132 151 PVKSKELLMVREPLGVVGLITPWN-FPM-AMITRKVAPALAAGCT--CVIKPAEDTPLTALALAALAHEAQIPKGVLNVV 226 (507)
Q Consensus 151 ~~~~~~~~~~~~P~Gvv~~i~p~n-~P~-~~~~~~l~~ALaaGN~--Vvlkps~~~~~~~~~l~~~l~~aGlP~gvv~~v 226 (507)
..+|......+.|+--|++..|.- +|+ .+.++..+||-.+|.. |+.-|+...|. +.-..+.+|.. .+.
T Consensus 108 ~~~Gv~~g~~~~PI~~VGlYVPGG~A~ypSsvLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~----~iy 179 (431)
T d1k75a_ 108 TQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQ----DVF 179 (431)
T ss_dssp EETTEEEEEEEEECSEEEEECCCSSSCCHHHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCC----EEE
T ss_pred ccCCceeeeeeeehhhheeeccCCCccchHHHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCcc----ceE
Confidence 234667778889999999999964 333 3455678999999975 44567665654 23334555543 233
Q ss_pred eCCCCCchHHHHhhh----cCCCccEEEEeCCHHHHHHHHHhhcccccccccccCCCCc--EEEcCCCCHHHHHHHHHHH
Q psy3132 227 TSSRTNANSVGKLLC----TSPHVAGISFTGSTQVGKILYSHCSQGIKRLSLELGGNAP--FIVYSNANLQKAVSGAMAA 300 (507)
Q Consensus 227 ~g~~~~~~~~~~~L~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~lelgG~~~--~iV~~daDl~~aa~~i~~~ 300 (507)
.- +|...-.+|. .-|+||.|+=.|+.-+..+=..-.+....--+=-+.|.+= +|-++++|.+.++..++.-
T Consensus 180 ~~---GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~aGPSEv~viAD~~a~p~~iAaDllaQ 256 (431)
T d1k75a_ 180 NV---GGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQ 256 (431)
T ss_dssp EC---CHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHH
T ss_pred ec---CChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccccCCceEEEEecCCCCHHHHHHHHHhc
Confidence 32 2555555554 4678999999999876543322222110000111235554 3445678999998888766
Q ss_pred HHHhcCCCcccCcceechh--hhHHHHHHHHHHHHHhccccCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCeEEe
Q psy3132 301 KFRNCGQACVAANRFLIQE--QVFDQFVEMLKVEITKSFIQGDTSKNDKCNLGPLINLAQVEKVDSIVQDAISKGAKVIL 378 (507)
Q Consensus 301 ~~~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~~~~g~~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 378 (507)
+=.... + +.++|.. +..+++.+.+.+.+.. +. .. +..+.....
T Consensus 257 AEH~~~----a-~~ilvt~~~~l~~~v~~~i~~~l~~-l~------r~-----------------~i~~~s~~~------ 301 (431)
T d1k75a_ 257 AEHGPD----S-QVILLTPAADMARRVAEAVERQLAE-LP------RA-----------------ETARQALNA------ 301 (431)
T ss_dssp HTTCTT----C-EEEEEESCHHHHHHHHHHHHHHHHT-CS------SC-----------------HHHHHHHTT------
T ss_pred cCCccc----c-eeEEEeccHHHHHHHHHHHHHHhhh-ch------HH-----------------HHHHhhhcc------
Confidence 533322 2 3345543 4455555555555544 21 00 011111100
Q ss_pred CCCccccCCCceeeceEeecCCCCCCCcccceeeccEEeEecCCHHHHHHHHhcCCCCcEEEEecCCHHHHHHHHhhc-c
Q psy3132 379 GGGKVTKLGSKFFAPTILTNITPDMLCYTEEVFGPVAVCIKFKTEEESLCVANNSNTGLAGYFFTNDISQAWRVGKKL-Q 457 (507)
Q Consensus 379 gg~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l-~ 457 (507)
.| ++.++|++|+++++|..-.= -..|.++|.. ++..++ .
T Consensus 302 --------------------------------~~----ii~v~~~~ea~~~~N~~APE-HL~l~~~~~~---~~~~~i~n 341 (431)
T d1k75a_ 302 --------------------------------SR----LIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITS 341 (431)
T ss_dssp --------------------------------CE----EEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCC
T ss_pred --------------------------------ce----EEEecCHHHHHHHHHhhhHH-HHHHHhcCHH---HHHhhhhh
Confidence 11 33468899999999986444 3778888764 466776 5
Q ss_pred eeeEEEcCCCC---------CCCCCcccCCCCCCCCCCchHHHHHhchhceEE
Q psy3132 458 VGMVGINEGII---------SHTEAAFGGVKESGLGREGSRHGMEEFTQIKYM 501 (507)
Q Consensus 458 ~G~v~iN~~~~---------~~~~~pfGG~~~SG~g~~~g~~~l~~~t~~k~v 501 (507)
+|.|++..++. .++-+|-|| .+|+.|.-+...|++.-++
T Consensus 342 AGsIflG~~sp~a~GDY~aGpnHvLPT~G-----~Ar~~sgLsv~dF~k~~s~ 389 (431)
T d1k75a_ 342 AGSVFLGDWSPESAGDYASGTNHVLPTYG-----YTATCSSLGLADFQKRMTV 389 (431)
T ss_dssp CSEEEESTTCCHHHHHHTSSSCCCCCCTT-----GGGTCCCCCGGGGEEEEEE
T ss_pred cchhhcCCCCcchhhccccCCCccCCCCC-----ceeecCCCCHHHeeeeeeE
Confidence 99999997654 245677665 4566666678888876544
|