Psyllid ID: psy3602

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390
MFSCFVHGENYNHTSKSYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRDK
cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHcHHHHHHHHccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHcHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccccccccEEEEcccccEEcccEEEccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccccc
ccccEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcHHccccccccccEEEccccccccccccccccEEHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccEEEEcccccEEEccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccEEEEccc
mfscfvhgenynhtsksytngmskeeKMTLREESRDMFYHAYRAYmdnaypadelmplsctgrwrsqhtsrgdiddtlgnFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGfrllpafntttgiphgrinlrhglkskglewsvDTCTACAGTMILEMAALSrlsglpifeAKAHRAMDGLWAArnrdsdlmgtvlnidsgdwirrdsgvgagiDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYisrgpllidvhmhkpqmtsRNFMDALLAFWpglqvhwgqhplrpefleSTYFLYkstgdphyldvGKSVLRALQTHarvpcgyaavrdk
mfscfvhgenynhtsksytngmskeEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNtttgiphgriNLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLnidsgdwirrDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTharvpcgyaavrdk
MFSCFVHGENYNHTSKSYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSltlidtldtlailgdiEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRDK
************************************MFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAA****
MFSCFV*GEN********************REESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVR**
MFSCFVHGENYNHTSKSYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRDK
*FSCFVHGENYNHTS*SYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD*
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MFSCFVHGENYNHTSKSYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRDK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query390 2.2.26 [Sep-21-2011]
Q6GQB9 913 ER degradation-enhancing N/A N/A 0.941 0.401 0.580 1e-138
Q9BZQ6 932 ER degradation-enhancing yes N/A 0.938 0.392 0.570 1e-132
Q2HXL6 931 ER degradation-enhancing yes N/A 0.938 0.393 0.570 1e-131
Q9FG93 624 Probable alpha-mannosidas yes N/A 0.897 0.560 0.423 4e-85
Q92611 657 ER degradation-enhancing no N/A 0.964 0.572 0.392 8e-81
Q925U4 652 ER degradation-enhancing no N/A 0.933 0.558 0.395 3e-80
Q9SXC9 574 Probable alpha-mannosidas no N/A 0.892 0.606 0.414 4e-78
Q9BV94 578 ER degradation-enhancing no N/A 0.876 0.591 0.387 4e-74
O94726 787 ER degradation-enhancing yes N/A 0.930 0.461 0.377 1e-69
P38888 796 ER degradation-enhancing yes N/A 0.928 0.454 0.297 1e-46
>sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 Back     alignment and function desciption
 Score =  491 bits (1264), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 237/408 (58%), Positives = 294/408 (72%), Gaps = 41/408 (10%)

Query: 21  GMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGN 80
            ++KEEK  LR +  +MF HAY  YM +AYPADELMPL+C GR R Q  SRGD+DD LG 
Sbjct: 29  AVTKEEKAHLRSQVLEMFDHAYGNYMQHAYPADELMPLTCRGRIRGQEPSRGDVDDALGK 88

Query: 81  FSLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLA 140
           FSLTLIDTLDTL +L   +EFE A + +  +VN D+DIVVSVFETNIRVLGGLL GH +A
Sbjct: 89  FSLTLIDTLDTLVVLNKTKEFEDAVRKVITDVNLDNDIVVSVFETNIRVLGGLLGGHSVA 148

Query: 141 EYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSK----GLEW 196
              K N D MQWY  +LL +AK++G++LLPAFNTT+G+P+ RINL+ G++      G E 
Sbjct: 149 IMLKENGDGMQWYNDELLHMAKELGYKLLPAFNTTSGLPYPRINLKFGIRRPEARTGTE- 207

Query: 197 SVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGD 256
             DTCTACAGTMILE AALSR +G+ +FE  A +A+D LW  R R S+L+G  +NI +GD
Sbjct: 208 -TDTCTACAGTMILEFAALSRFTGISVFEEHARKALDFLWDKRQRSSNLVGVTINIHTGD 266

Query: 257 WIRRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKP 316
           W+R+DSGVGAGIDSYYEY LKAYVLLG D YL RF+ HY A+M+YIS+ PLL+DVH+HKP
Sbjct: 267 WVRKDSGVGAGIDSYYEYLLKAYVLLGDDSYLERFNTHYDAIMRYISQPPLLLDVHIHKP 326

Query: 317 QMTSRNFMDALLAFWPGLQ-----------------------------------VHWGQH 341
            +T+R +MD+LLAF+PGLQ                                   VHW QH
Sbjct: 327 MLTARTWMDSLLAFFPGLQVLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQH 386

Query: 342 PLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD 389
           PLRPEF ESTYFLYK+TGDP+YL+VGK+++  L  +ARVPCG+AAV+D
Sbjct: 387 PLRPEFAESTYFLYKATGDPYYLEVGKTLIDNLNKYARVPCGFAAVKD 434
May be involved in endoplasmic reticulum-associated degradation (ERAD).
Xenopus laevis (taxid: 8355)
>sp|Q9BZQ6|EDEM3_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens GN=EDEM3 PE=1 SV=2 Back     alignment and function description
>sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus musculus GN=Edem3 PE=1 SV=2 Back     alignment and function description
>sp|Q9FG93|MNS4_ARATH Probable alpha-mannosidase I MNS4 OS=Arabidopsis thaliana GN=MNS4 PE=2 SV=1 Back     alignment and function description
>sp|Q92611|EDEM1_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens GN=EDEM1 PE=1 SV=1 Back     alignment and function description
>sp|Q925U4|EDEM1_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus GN=Edem1 PE=2 SV=1 Back     alignment and function description
>sp|Q9SXC9|MNS5_ARATH Probable alpha-mannosidase I MNS5 OS=Arabidopsis thaliana GN=MNS5 PE=2 SV=1 Back     alignment and function description
>sp|Q9BV94|EDEM2_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 2 OS=Homo sapiens GN=EDEM2 PE=1 SV=2 Back     alignment and function description
>sp|O94726|MNL1_SCHPO ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mnl1 PE=3 SV=2 Back     alignment and function description
>sp|P38888|MNL1_YEAST ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNL1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
332022987 1359 ER degradation-enhancing alpha-mannosida 0.943 0.270 0.667 1e-167
350425278 1376 PREDICTED: ER degradation-enhancing alph 0.943 0.267 0.672 1e-166
380023334 1342 PREDICTED: LOW QUALITY PROTEIN: ER degra 0.943 0.274 0.672 1e-166
328792816 1273 PREDICTED: ER degradation enhancer, mann 0.943 0.289 0.672 1e-166
307208663 1358 ER degradation-enhancing alpha-mannosida 0.943 0.270 0.665 1e-165
383861089 1288 PREDICTED: ER degradation-enhancing alph 0.943 0.285 0.665 1e-165
158293533 778 AGAP008749-PA [Anopheles gambiae str. PE 0.951 0.476 0.657 1e-164
340709256 824 PREDICTED: ER degradation-enhancing alph 0.943 0.446 0.672 1e-164
91088351 994 PREDICTED: similar to mannosyl-oligosacc 0.943 0.370 0.669 1e-164
193643388 858 PREDICTED: ER degradation-enhancing alph 0.943 0.428 0.647 1e-163
>gi|332022987|gb|EGI63252.1| ER degradation-enhancing alpha-mannosidase-like 3 [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 269/403 (66%), Positives = 325/403 (80%), Gaps = 35/403 (8%)

Query: 22  MSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNF 81
           M+KEE+  L+EE+RDMFYHAY AYMDNAYPADELMPLSC GR+R    +RGDID TLGNF
Sbjct: 32  MNKEEREALKEEARDMFYHAYNAYMDNAYPADELMPLSCKGRYRGSEPNRGDIDSTLGNF 91

Query: 82  SLTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAE 141
           SLTL+DTLDTL +LGD+EEFE+A KL++ +V+FD+D++VS+FETNIR+LGGLLSGH+LAE
Sbjct: 92  SLTLVDTLDTLVVLGDLEEFENAVKLVARDVSFDTDVIVSLFETNIRMLGGLLSGHILAE 151

Query: 142 YFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTC 201
           Y +   D+M WY G+LL+LAKD+G+R LPAFNTTTGIP+GRINL+ G+K   +E S +TC
Sbjct: 152 YLQQRADIMPWYRGELLDLAKDLGYRFLPAFNTTTGIPYGRINLKRGMKGVPVEISRETC 211

Query: 202 TACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRD 261
           TACAG+MILEMAALSRL+G PIFE KA +AMD LW  R+R +DLMG+VLN++SGDW+RRD
Sbjct: 212 TACAGSMILEMAALSRLTGEPIFEEKAQKAMDVLWRMRHRGTDLMGSVLNVNSGDWVRRD 271

Query: 262 SGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSR 321
           SGVGAGIDSYYEYCLKAY+LLG +KYL RF+KHY AVMKY+S+GP+L+DVHMH+P   S+
Sbjct: 272 SGVGAGIDSYYEYCLKAYILLGDEKYLGRFNKHYQAVMKYVSQGPMLLDVHMHRPNTNSK 331

Query: 322 NFMDALLAFWPGL-----------------------------------QVHWGQHPLRPE 346
           NFMDALLAFWPGL                                   QVHWG HPLRPE
Sbjct: 332 NFMDALLAFWPGLQVLKGDIKPAVETHEMLYQVMQRHNFIPEAFTTDFQVHWGHHPLRPE 391

Query: 347 FLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD 389
           FLESTYFLY++TGD +YL VG+ VL++LQT+ARVPCGYAAV D
Sbjct: 392 FLESTYFLYRATGDHYYLGVGRKVLKSLQTYARVPCGYAAVSD 434

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|350425278|ref|XP_003494070.1| PREDICTED: ER degradation-enhancing alpha-mannosidase-like 3-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|380023334|ref|XP_003695478.1| PREDICTED: LOW QUALITY PROTEIN: ER degradation-enhancing alpha-mannosidase-like 3-like [Apis florea] Back     alignment and taxonomy information
>gi|328792816|ref|XP_624812.3| PREDICTED: ER degradation enhancer, mannosidase 2 [Apis mellifera] Back     alignment and taxonomy information
>gi|307208663|gb|EFN85953.1| ER degradation-enhancing alpha-mannosidase-like 3 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|383861089|ref|XP_003706019.1| PREDICTED: ER degradation-enhancing alpha-mannosidase-like 3 [Megachile rotundata] Back     alignment and taxonomy information
>gi|158293533|ref|XP_314865.3| AGAP008749-PA [Anopheles gambiae str. PEST] gi|157016753|gb|EAA10107.3| AGAP008749-PA [Anopheles gambiae str. PEST] Back     alignment and taxonomy information
>gi|340709256|ref|XP_003393227.1| PREDICTED: ER degradation-enhancing alpha-mannosidase-like 3-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|91088351|ref|XP_971536.1| PREDICTED: similar to mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Tribolium castaneum] Back     alignment and taxonomy information
>gi|193643388|ref|XP_001946268.1| PREDICTED: ER degradation-enhancing alpha-mannosidase-like 3-like isoform 1 [Acyrthosiphon pisum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query390
FB|FBgn0032480 801 Edem2 "Edem2" [Drosophila mela 0.858 0.418 0.633 1.9e-140
WB|WBGene00013919 931 ZC506.1 [Caenorhabditis elegan 0.794 0.332 0.596 2e-119
ZFIN|ZDB-GENE-091113-49 837 si:ch211-282j22.3 "si:ch211-28 0.866 0.403 0.573 7.9e-101
UNIPROTKB|E1BQI6 934 EDEM3 "Uncharacterized protein 0.851 0.355 0.566 7.1e-100
UNIPROTKB|E1B789 933 EDEM3 "Uncharacterized protein 0.851 0.355 0.560 1e-98
UNIPROTKB|B7ZLZ2 905 EDEM3 "ER degradation-enhancin 0.851 0.366 0.560 1e-98
UNIPROTKB|Q9BZQ6 932 EDEM3 "ER degradation-enhancin 0.851 0.356 0.560 1e-98
UNIPROTKB|F1S3N9 744 EDEM3 "Uncharacterized protein 0.851 0.446 0.560 1e-98
RGD|1561496 932 Edem3 "ER degradation enhancer 0.851 0.356 0.557 1.3e-98
UNIPROTKB|J9P409 933 EDEM3 "Uncharacterized protein 0.851 0.355 0.557 2.2e-98
FB|FBgn0032480 Edem2 "Edem2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1147 (408.8 bits), Expect = 1.9e-140, Sum P(2) = 1.9e-140
 Identities = 214/338 (63%), Positives = 262/338 (77%)

Query:    19 TNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTL 78
             T  MS +E+  LREE+RDMFYHAY AYM NAYPADELMPLSC GR+R    SRGD+DD L
Sbjct:    39 TQNMSNKERAELREEARDMFYHAYNAYMQNAYPADELMPLSCKGRYRGVTPSRGDMDDIL 98

Query:    79 GNFSXXXXXXXXXXXXXXXXEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHV 138
             GNFS                 EF+HA KL+   V FDSDI+VSVFETNIR++GGLLS H+
Sbjct:    99 GNFSMTLVDTLDTLVLLGDFTEFDHAVKLVIREVQFDSDIIVSVFETNIRMVGGLLSAHI 158

Query:   139 LAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSV 198
             LAEY + + D M WY G+LLE+++++G+RLLPAFNT+TGIPH R+NLR G+K   L+ S 
Sbjct:   159 LAEYLQKHADTMHWYKGELLEMSRELGYRLLPAFNTSTGIPHARVNLRLGMKDPMLKKSR 218

Query:   199 DTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWI 258
             +TCTACAGT++LE AALSRL+G PIFE +AH AMD LW  R+R SDLMGTVLN+ SGDW+
Sbjct:   219 ETCTACAGTILLEFAALSRLTGDPIFEVRAHAAMDALWKLRHRGSDLMGTVLNVHSGDWV 278

Query:   259 RRDSGVGAGIDSYYEYCLKAYVLLGQDKYLSRFDKHYSAVMKYISRGPLLIDVHMHKPQM 318
             RRDSGVGAGIDSYYEY  K+YVLLG DKYL+RF++HY+AVMKY+S GP+L+DV MH+P  
Sbjct:   279 RRDSGVGAGIDSYYEYLFKSYVLLGDDKYLARFNRHYNAVMKYVSEGPMLLDVLMHRPHA 338

Query:   319 TSRNFMDALLAFWPGLQVHWGQHPLRPEFLESTYFLYK 356
              S+NFMD+LLAFWPGLQV  G   L+P  +++   LY+
Sbjct:   339 KSKNFMDSLLAFWPGLQVLSGD--LKPA-VQTHEMLYQ 373
GO:0004571 "mannosyl-oligosaccharide 1,2-alpha-mannosidase activity" evidence=ISM;ISS
GO:0016020 "membrane" evidence=IEA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0051082 "unfolded protein binding" evidence=IPI
GO:0030433 "ER-associated protein catabolic process" evidence=IGI
GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=IGI
WB|WBGene00013919 ZC506.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-091113-49 si:ch211-282j22.3 "si:ch211-282j22.3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BQI6 EDEM3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1B789 EDEM3 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|B7ZLZ2 EDEM3 "ER degradation-enhancing alpha-mannosidase-like protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9BZQ6 EDEM3 "ER degradation-enhancing alpha-mannosidase-like protein 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1S3N9 EDEM3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1561496 Edem3 "ER degradation enhancer, mannosidase alpha-like 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J9P409 EDEM3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q2HXL6EDEM3_MOUSENo assigned EC number0.57000.93840.3931yesN/A
Q9BZQ6EDEM3_HUMANNo assigned EC number0.57000.93840.3927yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
pfam01532445 pfam01532, Glyco_hydro_47, Glycosyl hydrolase fami 1e-123
PTZ00470522 PTZ00470, PTZ00470, glycoside hydrolase family 47 1e-50
>gnl|CDD|216556 pfam01532, Glyco_hydro_47, Glycosyl hydrolase family 47 Back     alignment and domain information 
 Score =  363 bits (935), Expect = e-123
 Identities = 141/421 (33%), Positives = 199/421 (47%), Gaps = 94/421 (22%)

Query: 37  MFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILG 96
            F HA+  Y   A+  DEL P+SC GR            D+ G +  TL+D+LDTL I+G
Sbjct: 1   AFLHAWDGYKKYAWGHDELRPISCRGR------------DSFGGWGATLVDSLDTLYIMG 48

Query: 97  DIEEFEHATKLISENVNFDSD-IVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTG 155
             +EFE A   + + ++FD D   VSVFET IR LGGLLS + L+               
Sbjct: 49  LTDEFEEAVDWVEKKLDFDKDSTDVSVFETTIRYLGGLLSAYDLS------------GDD 96

Query: 156 QLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAAL 215
            LLE A D+  RLLPAF+T TGIP+ R+NL  G  +        +  A AGT+ LE   L
Sbjct: 97  LLLEKAVDLADRLLPAFDTPTGIPYPRVNLGKGGVNP--VAGGASSLAEAGTLQLEFTRL 154

Query: 216 SRLSGLPIFEAKAHRAMDGLWAARNRDSD-LMGTVLNIDSGDWIRRDSGVGAGIDSYYEY 274
           S+L+G P +E  A R MD LW +++R    L+   ++  +G +   D  +GAG DSYYEY
Sbjct: 155 SQLTGDPKYEDAAERVMDALWKSQSRSLPGLVPIFIDPSTGQFTGGDITLGAGGDSYYEY 214

Query: 275 CLKAYVLLGQ--DKYLSRFDKHYSAVMKYISRGPL----LIDVHMHK--------PQMTS 320
            LK Y+LLG    +YL  +D+   A+ K++   P     L+ V            P+M  
Sbjct: 215 LLKQYILLGGKDPQYLDMYDEAMDAIKKHLLFRPSTPSDLLFVGELSSGGGGELSPKMDH 274

Query: 321 -RNFMDALLA-----------------------------FWPGL---------------- 334
              F   LLA                                GL                
Sbjct: 275 LVCFAGGLLALGAKLGLPDKGDLELAEELTDTCYKMYKSTPTGLGPEIFYFNPCPCWDED 334

Query: 335 ------QVHWGQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVR 388
                 ++    + LRPE +ES ++LY+ TGDP Y + G  + +A++ + R PCGYA ++
Sbjct: 335 KWDFYVKIADSHYLLRPETIESLFYLYRLTGDPKYREWGWEIFQAIEKYTRTPCGYAGIK 394

Query: 389 D 389
           D
Sbjct: 395 D 395

Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). Length = 445
>gnl|CDD|240427 PTZ00470, PTZ00470, glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 390
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 100.0
KOG2431|consensus546 100.0
KOG2429|consensus 622 100.0
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 100.0
KOG2204|consensus625 100.0
KOG2430|consensus 587 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.14
COG1331667 Highly conserved protein containing a thioredoxin 97.75
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 97.73
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.56
KOG2204|consensus 625 97.18
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.17
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.02
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 96.65
PF07944 520 DUF1680: Putative glycosyl hydrolase of unknown fu 96.44
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 95.78
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 94.15
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 93.47
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 92.97
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 92.6
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 92.44
PF03663 370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 91.88
PF06917 557 Pectate_lyase_2: Periplasmic pectate lyase; InterP 91.24
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 90.85
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 89.91
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 89.05
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 88.82
COG1331667 Highly conserved protein containing a thioredoxin 88.78
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 87.67
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 87.39
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 86.33
PF07221 346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 85.83
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 85.48
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 82.76
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.9e-111  Score=870.15  Aligned_cols=351  Identities=33%  Similarity=0.498  Sum_probs=311.9

Q ss_pred             CCccccCcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCCCCCCCCCccCcchhhhhhccc
Q psy3602          11 YNHTSKSYTNGMSKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLD   90 (390)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~r~~~Vk~~f~haw~~Y~~~A~g~Del~PlS~~g~~~~~~~~~~~~~d~~gg~g~TlVDSLD   90 (390)
                      ++..++++  ..+.+...+||++||+||+|||++|++||||||||+|+||+|+            | ++|||+|||||||
T Consensus        55 ~~~~~~~~--~~~~~~~~~r~~~Vk~~F~haW~~Y~~~Awg~DEL~P~S~~~~------------~-~~g~g~TlVDSLD  119 (522)
T PTZ00470         55 FNKIDEVY--YQNEKLNIKRRESVREAMKHAWEGYKEYAWGHDELRPLTKRHH------------E-WFGLGLTIIDSLD  119 (522)
T ss_pred             CCCccccc--cCCchhHHHHHHHHHHHHHHHHHHHHHhCcCccceecCcCCcc------------C-CCcchhHHHHHHH
Confidence            44445555  3344566799999999999999999999999999999999875            3 4679999999999


Q ss_pred             hhhhcCCHHHHHHHHHHHHhccCC--CCCceeccceehhhcccchhhHhhhhhhhccccchhhhhcHHHHHHHHHHHHHh
Q psy3602          91 TLAILGDIEEFEHATKLISENVNF--DSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRL  168 (390)
Q Consensus        91 TL~iMgl~~ef~~a~~~v~~~~~f--~~~~~vsvFEttIR~LGGLLSAy~Ls~~~~~~~~~~~~yd~~lL~kA~dLad~L  168 (390)
                      |||||||++||++|++||.++++|  +++..|||||||||+||||||||+||+            |++||+||+||||+|
T Consensus       120 TL~IMgl~~Ef~~a~~~V~~~l~f~~~~~~~vsvFEttIR~LGGLLSAy~Ls~------------d~~lL~kA~dLgd~L  187 (522)
T PTZ00470        120 TLKIMGLKKEYKEGRDWVANNLKQSKDTGLGVSVFETTIRVLGGLLSAYDLTG------------DEMYLEKAREIADRL  187 (522)
T ss_pred             HHHHcCChHHHHHHHHHHHhhCCCCCCCCCeeeeeeeehhhHhHHHHHHHHcC------------CHHHHHHHHHHHHHH
Confidence            999999999999999999988999  668899999999999999999999998            689999999999999


Q ss_pred             hcccCCCCCCccceeecccCCCCCCCCCCCCcccccccchhhhHHHHHHhhCChhHHHHHHHHHHHHHhhcCCCCCCCCe
Q psy3602         169 LPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGT  248 (390)
Q Consensus       169 l~AF~T~sgiP~~~vnl~~g~~~~~~~~~~~~~lAe~Gsl~LEf~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~gL~~~  248 (390)
                      +|||+||||||++.||+++|..+...+..+.+++||+||++|||++||++|||++|+++|++|++.|++.+...+||+|+
T Consensus       188 l~AFdTptgiP~~~vnl~~g~~~~~~~~~~~~~lAe~gSl~LEF~~LS~lTGd~kY~~~a~~i~~~l~~~~~~~~GL~p~  267 (522)
T PTZ00470        188 LPAFNEDTGFPASEINLATGRKSYPGWAGGCSILSEVGTLQLEFNYLSEITGDPKYAEYVDKVMDALFSMKPAINGLYPI  267 (522)
T ss_pred             HHhhcCCCCCCcceeecccCCCCCcccCCCccchhhhhhHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCCCCCCccce
Confidence            99999999999999999999877432225778999999999999999999999999999999999999987654799999


Q ss_pred             eeecCCCCeeecccCCCCCCchhhHhHHHHHHhcC--cchhHHHHHHHHHHHHHHhhcCC--cceeEeccCCCcccchhh
Q psy3602         249 VLNIDSGDWIRRDSGVGAGIDSYYEYCLKAYVLLG--QDKYLSRFDKHYSAVMKYISRGP--LLIDVHMHKPQMTSRNFM  324 (390)
Q Consensus       249 ~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~ll~g--~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~  324 (390)
                      .||+.+|+|++..+++||++|||||||||+|+|+|  ++.++++|.++++++++||..++  .+..+.... .....++|
T Consensus       268 ~i~~~~g~~~~~~~siGa~~DS~YEYLlK~~il~~~~d~~~~~~~~~a~~~i~~~l~~~s~~~~~~v~~~~-~~~~~~~~  346 (522)
T PTZ00470        268 FLNPDAGRFCGNHISLGALGDSYYEYLLKQWLYTNGREERYRRLFVESAKGIIEHLYKRSPKGLTYIAEMD-GGSLTNKM  346 (522)
T ss_pred             EECCccCccCCCceeecCCcchhHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecc-CCcCcchh
Confidence            99999999999999999999999999999999997  57899999999999999986432  222332222 23456899


Q ss_pred             hhhhhhcccce--------------------------------------------e-------------ccCCCCCCchh
Q psy3602         325 DALLAFWPGLQ--------------------------------------------V-------------HWGQHPLRPEF  347 (390)
Q Consensus       325 ~~L~~f~pG~~--------------------------------------------~-------------~~~~y~LRPE~  347 (390)
                      +||+||+|||+                                            +             ..++|+||||+
T Consensus       347 ~hL~cF~gG~~aLg~~~~~~~~~~~~~~~~~~a~~l~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~d~~Y~LRPE~  426 (522)
T PTZ00470        347 EHLACFAGGMFALGAAINITPDDEKSARYMEVGEEVTKTCYETYATSPTGLGPEIFHFDPNSGDISPNVHDSHYILRPET  426 (522)
T ss_pred             hhhhhhccchhhhcccccccccccccHHHHHHHHHHHHHHHHHHHhcccCCCCceEEeccCccccccccCCCCCCCChhH
Confidence            99999999976                                            0             12469999999


Q ss_pred             HHHHHHHHHhcCChhhHHHHHHHHHHHHHhcccCCccccccC
Q psy3602         348 LESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD  389 (390)
Q Consensus       348 iES~fyl~R~TgD~~Yre~gW~if~ai~k~~r~~~Gya~i~d  389 (390)
                      |||+|||||+||||+||||||+||+||+++|||+|||++|+|
T Consensus       427 iES~fylyR~TgD~~yre~gW~~f~ai~k~~rt~~Gya~i~d  468 (522)
T PTZ00470        427 VESIFILYRLTGDPKYREWAWKIFQAIEKHCKTENGYSGLKN  468 (522)
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence            999999999999999999999999999999999999999988

>KOG2431|consensus Back     alignment and domain information
>KOG2429|consensus Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2204|consensus Back     alignment and domain information
>KOG2430|consensus Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2204|consensus Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
1fmi_A458 Crystal Structure Of Human Class I Alpha1,2-Mannosi 9e-28
1fo2_A460 Crystal Structure Of Human Class I Alpha1,2-Mannosi 9e-28
1x9d_A538 Crystal Structure Of Human Class I Alpha-1,2-Mannos 2e-27
1nxc_A 478 Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia R 2e-22
1nxc_A478 Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia R 3e-04
4ayo_A447 Structure Of The Gh47 Processing Alpha-1,2-mannosid 7e-18
1kkt_A 511 Structure Of P. Citrinum Alpha 1,2-Mannosidase Reve 2e-16
2ri8_A 475 Penicillium Citrinum Alpha-1,2-Mannosidase Complex 2e-16
1dl2_A 511 Crystal Structure Of Class I Alpha-1,2-Mannosidase 2e-15
1g6i_A 545 Crystal Structure Of The Yeast Alpha-1,2-Mannosidas 2e-15
1hcu_A 503 Alpha-1,2-Mannosidase From Trichoderma Reesei Lengt 7e-11
>pdb|1FMI|A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase Length = 458 Back     alignment and structure 
Iteration: 1

 Score =  120 bits (302), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 180/418 (43%), Gaps = 93/418 (22%)
Query: 36  DMFYHAYRAYMDNAYPADELMPLSCT-GRWRSQHTSRGDIDDTLGNFSXXXXXXXXXXXX 94
           D+F HA++ Y   A+  DEL P+S +   W     +  D  DT+                
Sbjct: 16  DVFLHAWKGYRKFAWGHDELKPVSRSFSEWFGLGLTLIDALDTMWILGLR---------- 65
Query: 95  XXXXEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYT 154
               +EFE A K +S+ ++F+ D+ V++FE+ IR+LGGLLS       + L+ D +    
Sbjct: 66  ----KEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSA------YHLSGDSL---- 111
Query: 155 GQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMILEMAA 214
              L  A+D G RL+PAF T + IP+  +N+  G+ +    W+ D+  A   ++ LE   
Sbjct: 112 --FLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGV-AHPPRWTSDSTVAEVTSIQLEFRE 168
Query: 215 LSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDS-GVGAGIDSYYE 273
           LSRL+G   F+    +    +     +   L+   +N  SG +       +GA  DSYYE
Sbjct: 169 LSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYE 228
Query: 274 YCLKAYVLLGQDK------YLSRFDKHYSAVMKYISRGPLLIDVHMHKPQMTSRNFMDAL 327
           Y LK ++  G+ +      Y+   +   + ++++     L     +   + +++  MD L
Sbjct: 229 YLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAK--MDHL 286
Query: 328 LAFWPGLQ--------------------------------------VHWGQHP------- 342
           + F PG                                        VH+  +P       
Sbjct: 287 VCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDV 346
Query: 343 ----------LRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPC-GYAAVRD 389
                     LRPE +ES ++LY+ TGD  Y D G  +L++     RVP  GY+++ +
Sbjct: 347 EVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINN 404
>pdb|1FO2|A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin Length = 460 Back     alignment and structure
>pdb|1X9D|A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue Length = 538 Back     alignment and structure
>pdb|1NXC|A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) Length = 478 Back     alignment and structure
>pdb|1NXC|A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) Length = 478 Back     alignment and structure
>pdb|4AYO|A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 Length = 447 Back     alignment and structure
>pdb|1KKT|A Chain A, Structure Of P. Citrinum Alpha 1,2-Mannosidase Reveals The Basis For Differences In Specificity Of The Er And Golgi Class I Enzymes Length = 511 Back     alignment and structure
>pdb|2RI8|A Chain A, Penicillium Citrinum Alpha-1,2-Mannosidase Complex With Glycerol Length = 475 Back     alignment and structure
>pdb|1DL2|A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution Length = 511 Back     alignment and structure
>pdb|1G6I|A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution Length = 545 Back     alignment and structure
>pdb|1HCU|A Chain A, Alpha-1,2-Mannosidase From Trichoderma Reesei Length = 503 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query390
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 1e-108
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 1e-105
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 1e-104
1hcu_A 503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 2e-98
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 2e-16
1dl2_A 511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 3e-95
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 4e-12
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Length = 478 Back     alignment and structure
 Score =  324 bits (832), Expect = e-108
 Identities = 108/426 (25%), Positives = 171/426 (40%), Gaps = 82/426 (19%)

Query: 23  SKEEKMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFS 82
           +       R + ++M  HA+  Y   A+  +EL P+S  G                    
Sbjct: 13  ADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGH---------SSSLFGNIKG 63

Query: 83  LTLIDTLDTLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEY 142
            T++D LDTL I+G   EF+ A   I + ++F+ +  VSVFE NIR +GGLLS + L+  
Sbjct: 64  ATIVDALDTLFIMGMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGE 123

Query: 143 FKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGL-KSKGLEWSVDTC 201
                           + A ++G +LLPAF+T +GIP   +N++ G+ ++        + 
Sbjct: 124 ------------EIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSI 171

Query: 202 TACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRD 261
            A  GT+ LE   LS LSG P+F  K  +    L      +  L    LN  SG W +  
Sbjct: 172 LAEFGTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEG-LYPNYLNPSSGQWGQHH 230

Query: 262 SGVGAGIDSYYEYCLKAYVLLGQ--DKYLSRFDKHYSAVMKYISRGP--LLIDVHMHKPQ 317
             VG   DS+YEY LKA+++  +   +    +     A+  ++ R     L  +   K  
Sbjct: 231 VSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGG 290

Query: 318 MTSRNFMDALLAFWPGLQV-------------------------HW-------------- 338
               + M  L  F  G+                           H               
Sbjct: 291 -LLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEAF 349

Query: 339 ---------------GQHPLRPEFLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCG 383
                            + LRPE +E+  ++++ T DP Y       + AL++H RV  G
Sbjct: 350 RFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGG 409

Query: 384 YAAVRD 389
           Y+ +RD
Sbjct: 410 YSGLRD 415
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Length = 475 Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Length = 538 Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Length = 503 Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Length = 503 Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Length = 511 Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Length = 511 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 100.0
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 100.0
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 100.0
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 100.0
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 97.94
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 97.91
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.84
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.67
1nc5_A373 Hypothetical protein YTER; structural genomics, he 97.64
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 97.54
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 97.5
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.44
2gz6_A 388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 97.26
2zzr_A 397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 97.19
2ahf_A 377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 97.12
3gt5_A 402 N-acetylglucosamine 2-epimerase; structural genomi 97.07
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 96.72
3pmm_A382 Putative cytoplasmic protein; structural genomics, 96.63
3pmm_A 382 Putative cytoplasmic protein; structural genomics, 95.9
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 95.33
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 95.32
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 95.02
1nc5_A 373 Hypothetical protein YTER; structural genomics, he 94.84
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 94.83
3k11_A 445 Putative glycosyl hydrolase; structural genomics, 94.66
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 94.4
3k11_A445 Putative glycosyl hydrolase; structural genomics, 94.05
2zbl_A 421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 93.7
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 93.31
2v8i_A 543 Pectate lyase; periplasm, beta-elimination, pectin 92.71
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 88.78
1wzz_A334 Probable endoglucanase; glycoside hydrolase family 87.6
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 80.12
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
Probab=100.00  E-value=1.1e-113  Score=885.31  Aligned_cols=344  Identities=28%  Similarity=0.385  Sum_probs=305.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCCCCCCCCCccCcchhhhhhccchhhhcCCHHHHHHHHH
Q psy3602          27 KMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATK  106 (390)
Q Consensus        27 ~~~r~~~Vk~~f~haw~~Y~~~A~g~Del~PlS~~g~~~~~~~~~~~~~d~~gg~g~TlVDSLDTL~iMgl~~ef~~a~~  106 (390)
                      ..+||++||+||+|||++|++||||||||+|+||+|+            |++||||+|||||||||+||||++||++|++
T Consensus         2 ~~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~------------d~~gg~g~TlVDsLDTL~IMgl~~Ef~~a~~   69 (475)
T 2ri9_A            2 NQAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHA------------DSRNGWGASAVDALSTAVIMGKADVVNAILE   69 (475)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEE------------CTTTTSCHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcc------------CCCCCcceeehhhccchhhcCCHHHHHHHHH
Confidence            3689999999999999999999999999999999986            7899999999999999999999999999999


Q ss_pred             HHHhccCCCC-CceeccceehhhcccchhhHhhhh-hhhccccchhhhhcHHHHHHHHHHHHHhhcccCCCCCCccceee
Q psy3602         107 LISENVNFDS-DIVVSVFETNIRVLGGLLSGHVLA-EYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRIN  184 (390)
Q Consensus       107 ~v~~~~~f~~-~~~vsvFEttIR~LGGLLSAy~Ls-~~~~~~~~~~~~yd~~lL~kA~dLad~Ll~AF~T~sgiP~~~vn  184 (390)
                      ||. +++|++ +..|||||||||+||||||||+|| ++...- ...+.|+++||+||+||||||+||||||||||+++||
T Consensus        70 ~v~-~~~f~~~~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~-~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vn  147 (475)
T 2ri9_A           70 HVA-DIDFSKTSDTVSLFETTIRYLAGMLSGYDLLQGPAKNL-VDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNIN  147 (475)
T ss_dssp             HHH-HCCTTCCSSCEEHHHHHHHHHHHHHHHHHHHHTTTTTS-CCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEC
T ss_pred             HHH-hCCCCcCCCccchhheehHhHhHHhHHHHhccCccccc-cccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceee
Confidence            996 899998 999999999999999999999999 421100 0112456899999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcccccccchhhhHHHHHHhhCChhHHHHHHHHHHHHHhhc----CCCCCCCCeeeecCCCCeeec
Q psy3602         185 LRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAAR----NRDSDLMGTVLNIDSGDWIRR  260 (390)
Q Consensus       185 l~~g~~~~~~~~~~~~~lAe~Gsl~LEf~~LS~lTGd~~Y~~~a~~~~~~l~~~~----~~~~gL~~~~i~~~tg~~~~~  260 (390)
                      ++++...    ..+.+|+||+||++|||++||++||||+|+++|+++++.|++.+    .+.+||+|+.||+.+|+|++.
T Consensus       148 l~~~~~~----~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~  223 (475)
T 2ri9_A          148 ITSHGND----GATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADS  223 (475)
T ss_dssp             TTTCCBC----CCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCC
T ss_pred             cccCCCc----CCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCC
Confidence            9996432    24568999999999999999999999999999999999999865    246899999999999999999


Q ss_pred             ccCCCCCCchhhHhHHHHHHhcCcc--hhHHHHHHHHHHHHHHhhcCCc----ceeEeccCCCcccchhhhhhhhhcccc
Q psy3602         261 DSGVGAGIDSYYEYCLKAYVLLGQD--KYLSRFDKHYSAVMKYISRGPL----LIDVHMHKPQMTSRNFMDALLAFWPGL  334 (390)
Q Consensus       261 ~~~~Ga~~DS~YEYLlK~~ll~g~~--~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~L~~f~pG~  334 (390)
                      .+++||++|||||||||+|+|+|+.  +|++||.+++++|++||.++|+    +..+.... .....++|+||+||+||+
T Consensus       224 ~~~~Ga~~DS~YEYLlK~~il~g~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~-~~~~~~~~~hL~cF~~G~  302 (475)
T 2ri9_A          224 RVSWNGGDDSFYEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYS-NRNYDLSSQHLTCFDGGS  302 (475)
T ss_dssp             CBCSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEE-TTEEECEEETGGGGHHHH
T ss_pred             ceeecCCcchHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEecc-CCccccccchHHHhHHHH
Confidence            9999999999999999999999974  8999999999999999987652    22332221 233568999999999998


Q ss_pred             e--------------------------------------ec----------------------cCCCCCCchhHHHHHHH
Q psy3602         335 Q--------------------------------------VH----------------------WGQHPLRPEFLESTYFL  354 (390)
Q Consensus       335 ~--------------------------------------~~----------------------~~~y~LRPE~iES~fyl  354 (390)
                      +                                      +.                      .++|+||||+|||+|||
T Consensus       303 ~aLgg~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fyl  382 (475)
T 2ri9_A          303 FLLGGTVLDRQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYA  382 (475)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHH
T ss_pred             HHhcccccccHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHH
Confidence            6                                      11                      13599999999999999


Q ss_pred             HHhcCChhhHHHHHHHHHHHHHhcccCCccccccC
Q psy3602         355 YKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD  389 (390)
Q Consensus       355 ~R~TgD~~Yre~gW~if~ai~k~~r~~~Gya~i~d  389 (390)
                      ||+||||+||||||+||+||||+|||+|||++|+|
T Consensus       383 yR~TgD~~yr~~gw~~f~ai~k~~rt~~G~a~i~d  417 (475)
T 2ri9_A          383 HRVTGKEIYRDWVWNAFVAINSTCRTDSGFAAVSD  417 (475)
T ss_dssp             HHHHCCHHHHHHHHHHHHHHHHHTBCSSSBCCBSC
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHHccccCCccccc
Confidence            99999999999999999999999999999999998
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2 Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 390
d1x9da1453 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidas 4e-95
d1nxca_467 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 2e-93
d2ri9a1475 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosid 4e-89
d1hcua_488 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 2e-87
d1dl2a_ 511 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 4e-87
d1dl2a_511 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 2e-12
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Seven-hairpin glycosidases
family: Class I alpha-1;2-mannosidase, catalytic domain
domain: Class I alpha-1;2-mannosidase, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  289 bits (742), Expect = 4e-95
 Identities = 112/420 (26%), Positives = 176/420 (41%), Gaps = 87/420 (20%)

Query: 31  REESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLD 90
           ++   D+F HA++ Y   A+  DEL P+S +              +  G   LTLID LD
Sbjct: 6   QKGVIDVFLHAWKGYRKFAWGHDELKPVSRSF------------SEWFG-LGLTLIDALD 52

Query: 91  TLAILGDIEEFEHATKLISENVNFDSDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLM 150
           T+ ILG  +EFE A K +S+ ++F+ D+ V++FE+ IR+LGGLLS + L           
Sbjct: 53  TMWILGLRKEFEEARKWVSKKLHFEKDVDVNLFESTIRILGGLLSAYHL----------- 101

Query: 151 QWYTGQLLELAKDIGFRLLPAFNTTTGIPHGRINLRHGLKSKGLEWSVDTCTACAGTMIL 210
                  L  A+D G RL+PAF T + IP+  +N+  G  +    W+ D+  A   ++ L
Sbjct: 102 -SGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTG-VAHPPRWTSDSTVAEVTSIQL 159

Query: 211 EMAALSRLSGLPIFEAKAHRAMDGLWAARNRDSDLMGTVLNIDSGDWIRRDS-GVGAGID 269
           E   LSRL+G   F+    +    +     +   L+   +N  SG +       +GA  D
Sbjct: 160 EFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARAD 219

Query: 270 SYYEYCLKAYVLLGQ--DKYLSRFDKHYSAVMKYISRG--PLLIDVHMHKPQMTSRNFMD 325
           SYYEY LK ++  G+   + L  + +    V  ++ R   P  +              MD
Sbjct: 220 SYYEYLLKQWIQGGKQETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMD 279

Query: 326 ALLAFWPGLQV--------------------------HWGQHPLRPE------------- 346
            L+ F PG                                +  L PE             
Sbjct: 280 HLVCFLPGTLALGVYHGLPASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRR 339

Query: 347 ----------------FLESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPC-GYAAVRD 389
                            +ES ++LY+ TGD  Y D G  +L++     RVP  GY+++ +
Sbjct: 340 DVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINN 399
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 467 Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Length = 475 Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Length = 488 Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 511 Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query390
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 100.0
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 100.0
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 100.0
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 100.0
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 100.0
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.91
d1nc5a_ 363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.4
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 96.82
d2d5ja1 377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 96.65
d1nc5a_ 363 Hypothetical protein YteR {Bacillus subtilis [TaxI 96.22
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 95.92
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 95.14
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 94.43
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 93.28
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 93.24
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 90.85
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 89.22
d1wzza1319 Probable endoglucanase CmcAX {Acetobacter xylinus 88.67
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 87.29
d1kwfa_363 CelA cellulase {Clostridium thermocellum [TaxId: 1 86.71
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Seven-hairpin glycosidases
family: Class I alpha-1;2-mannosidase, catalytic domain
domain: Class I alpha-1;2-mannosidase, catalytic domain
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=3.4e-109  Score=855.15  Aligned_cols=346  Identities=27%  Similarity=0.373  Sum_probs=303.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCCCCCCCCCccCcchhhhhhccchhhhcCCHHHHHHHHH
Q psy3602          27 KMTLREESRDMFYHAYRAYMDNAYPADELMPLSCTGRWRSQHTSRGDIDDTLGNFSLTLIDTLDTLAILGDIEEFEHATK  106 (390)
Q Consensus        27 ~~~r~~~Vk~~f~haw~~Y~~~A~g~Del~PlS~~g~~~~~~~~~~~~~d~~gg~g~TlVDSLDTL~iMgl~~ef~~a~~  106 (390)
                      +.+||++||+||+|||++|++||||||||+|+||++.            |.+||||+|||||||||+||||++||++|++
T Consensus         6 ~~~R~~~Vk~~F~~aw~~Y~~~Awg~DEl~PiS~~~~------------d~~~g~g~TlVDsLdTL~iMgl~~ef~~a~~   73 (488)
T d1hcua_           6 NPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFD------------DERNGWGSSAIDGLDTAILMGDADIVNTILQ   73 (488)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEE------------CTTTTSCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCC------------CCCCCchhHHHHHHHHHHHcCChHHHHHHHH
Confidence            3689999999999999999999999999999999875            7899999999999999999999999999999


Q ss_pred             HHHhccCCC----CCceeccceehhhcccchhhHhhhhhhhccccchhhhhcHHHHHHHHHHHHHhhcccCCCCCCccce
Q psy3602         107 LISENVNFD----SDIVVSVFETNIRVLGGLLSGHVLAEYFKLNTDLMQWYTGQLLELAKDIGFRLLPAFNTTTGIPHGR  182 (390)
Q Consensus       107 ~v~~~~~f~----~~~~vsvFEttIR~LGGLLSAy~Ls~~~~~~~~~~~~yd~~lL~kA~dLad~Ll~AF~T~sgiP~~~  182 (390)
                      ||. +++|+    +++.|||||||||+||||||||+||++........+.|++.||+||+||||+|+|||+||||||+++
T Consensus        74 ~v~-~i~f~~~~~~~~~vsvFEttIR~LGGLLsay~Ls~~~~~~~~~~~~~~~~lL~kA~dL~d~Ll~aF~t~tgiP~~~  152 (488)
T d1hcua_          74 YVP-QINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPT  152 (488)
T ss_dssp             HGG-GCCTTCCSSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSE
T ss_pred             HHH-hccCCcccccCCccchhhhhHHHHHHHHHHHHHccCcccccccccchhhHHHHHHHHHHHHHHHhhcCCCCCccce
Confidence            995 45554    4678999999999999999999999842211112245678899999999999999999999999999


Q ss_pred             eecccCCCCCCCCCCCCcccccccchhhhHHHHHHhhCChhHHHHHHHHHHHHHhhcCC---CCCCCCeeeecCCCCeee
Q psy3602         183 INLRHGLKSKGLEWSVDTCTACAGTMILEMAALSRLSGLPIFEAKAHRAMDGLWAARNR---DSDLMGTVLNIDSGDWIR  259 (390)
Q Consensus       183 vnl~~g~~~~~~~~~~~~~lAe~Gsl~LEf~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~---~~gL~~~~i~~~tg~~~~  259 (390)
                      ||+++|...   .+.+.+++||+||+||||++||++|||++|+++|+++++.|++.++.   .+||+|+.||+.+|+|.+
T Consensus       153 vnl~~~~~~---~~~~~~~~Ae~gsl~LEF~~LS~lTGd~kY~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~~g~~~~  229 (488)
T d1hcua_         153 VFFNPTVRR---SGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQD  229 (488)
T ss_dssp             EECSSSCEE---CCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCC
T ss_pred             eeccccCCC---CCCCCCcccccchHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhccCCcCCCCCcCceecCCCCceec
Confidence            999998665   34577899999999999999999999999999999999999986543   369999999999999999


Q ss_pred             cccCCCCCCchhhHhHHHHHHhcC--cchhHHHHHHHHHHHHHHhhcCCc----ceeEeccCCCcccchhhhhhhhhccc
Q psy3602         260 RDSGVGAGIDSYYEYCLKAYVLLG--QDKYLSRFDKHYSAVMKYISRGPL----LIDVHMHKPQMTSRNFMDALLAFWPG  333 (390)
Q Consensus       260 ~~~~~Ga~~DS~YEYLlK~~ll~g--~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~L~~f~pG  333 (390)
                      ..+++||++|||||||||+||++|  ++.+.++|.++++++++||...+.    +..+.... +....++|+||+||+||
T Consensus       230 ~~~~~Ga~~DS~YEYLlK~~il~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~-g~~~~~~~~hL~cF~gG  308 (488)
T d1hcua_         230 SSGSWSGLMDSFYEYLIKMYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYN-GQSTSPNSGHLASFGGG  308 (488)
T ss_dssp             CEECSSTTTHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEE-TTEEESEEEGGGGGHHH
T ss_pred             cceeeccccchHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccCCCCccCceEEeccC-CCCCCCcccccccccch
Confidence            999999999999999999999998  478999999999999999875432    22222222 22346899999999999


Q ss_pred             ce--------------------------------------e----------------------------ccCCCCCCchh
Q psy3602         334 LQ--------------------------------------V----------------------------HWGQHPLRPEF  347 (390)
Q Consensus       334 ~~--------------------------------------~----------------------------~~~~y~LRPE~  347 (390)
                      ++                                      +                            ..++|+||||+
T Consensus       309 l~aLg~~~~~~~~~~~~a~~l~~~c~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~  388 (488)
T d1hcua_         309 NFILGGILLNEQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPET  388 (488)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHH
T ss_pred             hhhhccccccchHHHHHHHHHHHHHHHHHHHhhhccCcceeecccccccccCCCcchhhcccccccceecccccCCCchH
Confidence            76                                      1                            11369999999


Q ss_pred             HHHHHHHHHhcCChhhHHHHHHHHHHHHHhcccCCccccccC
Q psy3602         348 LESTYFLYKSTGDPHYLDVGKSVLRALQTHARVPCGYAAVRD  389 (390)
Q Consensus       348 iES~fyl~R~TgD~~Yre~gW~if~ai~k~~r~~~Gya~i~d  389 (390)
                      |||+|||||+||||+||||||+||++|+++|||+||||+|+|
T Consensus       389 iES~fyLyR~Tgd~~yr~~gw~if~ai~~~~rt~~G~a~i~d  430 (488)
T d1hcua_         389 LESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSIND  430 (488)
T ss_dssp             HHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEETTEECCBSC
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCcCcccccc
Confidence            999999999999999999999999999999999999999998
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1wzza1 a.102.1.2 (A:23-341) Probable endoglucanase CmcAX {Acetobacter xylinus [TaxId: 28448]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure