Psyllid ID: psy3683

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-
Protein Sequence
MRVSFRERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSGPATVPLTLPPTPGRTLSVSMQDVSHTYPTNTKKQEAGGKGRYNKEVKKRERGETSNFVK
Secondary Structure (PSIPRED)
cEEEccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccHHHHHccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHcHHHHHHHcHHHHHHHHHHHHccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mrvsfrernvpfmtkfvpgrespppsgykasanphRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAIcptgyctipedlGIVCLWLGYfssilnpiIYTIFNRTFRAAFIRLLKCkcgqvtkpiryrsvndratassgpatvpltlpptpgrtlsvsmqdvshtyptntkkqeaggkgrynkevkkrergetsnfvk
Flexible Loop (DISEMBL)
mrvsfrernvpfmtkfvpgrespppsgykasanPHRLFKHIKKaqrrtrqastaansvrteqkaSKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKckcgqvtkpiryrsvndratassgpatvpltlpptPGRTLSVSMQDVShtyptntkkqeaggkgrynkevkkrergetsnfvk
Low Complexity Region (SEG)
MRVSFRERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKaqrrtrqastaaNSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSGpatvpltlpptpgrtlSVSMQDVSHTYPTNTKKQEAGGKGRYNKEVKKRERGETSNFVK
Disordered region (IsUnstruct)
*****************************************************************KVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRS*********************************************************************
Disordered Region (DISOPRED)
****************************************************************SKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQV*****************************************************************************
Disordered Region (DISEMBL)
MRVSFRERNVPFMTKFVP***********ASANPHRLFKHI********************QKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSGPATVPLTLPPTPGRTLSVSMQDV************************************
Disordered Region (DISPRO)
******************************************************ANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATAS*************************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRVSFRERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSGPATVPLTLPPTPGRTLSVSMQDVSHTYPTNTKKQEAGGKGRYNKEVKKRERGETSNFVK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	221	2.2.26 [Sep-21-2011]
Q75Z89	470	5-hydroxytryptamine recep	yes	N/A	0.461	0.217	0.450	4e-20
O46635	470	5-hydroxytryptamine recep	yes	N/A	0.461	0.217	0.450	2e-19
P50128	471	5-hydroxytryptamine recep	yes	N/A	0.452	0.212	0.442	2e-19
P28223	471	5-hydroxytryptamine recep	yes	N/A	0.452	0.212	0.442	2e-19
P50129	470	5-hydroxytryptamine recep	yes	N/A	0.452	0.212	0.451	3e-19
P35363	471	5-hydroxytryptamine recep	yes	N/A	0.470	0.220	0.442	3e-19
P14842	471	5-hydroxytryptamine recep	yes	N/A	0.470	0.220	0.442	3e-19
P18599	471	5-hydroxytryptamine recep	yes	N/A	0.461	0.216	0.441	5e-19
Q5R4Q6	471	5-hydroxytryptamine recep	N/A	N/A	0.452	0.212	0.433	2e-18
Q4LBB6	1256	Octopamine receptor beta-	no	N/A	0.565	0.099	0.373	6e-18

>sp|Q75Z89|5HT2A_BOVIN 5-hydroxytryptamine receptor 2A OS=Bos taurus GN=HTR2A PE=2 SV=1

 Score = 98.2 bits (243), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 71/111 (63%), Gaps = 9/111 (8%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPEDL 103
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   + E L
Sbjct: 308 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNRDVIEAL 360

Query: 104 GIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 361 LNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.
Bos taurus (taxid: 9913)

>sp|O46635|5HT2A_CANFA 5-hydroxytryptamine receptor 2A OS=Canis familiaris GN=HTR2A PE=2 SV=2

 Score = 95.9 bits (237), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 9/111 (8%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPEDL 103
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   I   L
Sbjct: 308 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNEDIIGAL 360

Query: 104 GIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 361 LNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Canis familiaris (taxid: 9615)

>sp|P50128|5HT2A_MACMU 5-hydroxytryptamine receptor 2A OS=Macaca mulatta GN=HTR2A PE=2 SV=1

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 13/113 (11%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED--- 102
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC     +  ED   
Sbjct: 309 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKE---SCNEDVIG 359

Query: 103 -LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 360 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Macaca mulatta (taxid: 9544)

>sp|P28223|5HT2A_HUMAN 5-hydroxytryptamine receptor 2A OS=Homo sapiens GN=HTR2A PE=1 SV=2

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 13/113 (11%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED--- 102
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC     +  ED   
Sbjct: 309 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKE---SCNEDVIG 359

Query: 103 -LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 360 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Homo sapiens (taxid: 9606)

>sp|P50129|5HT2A_PIG 5-hydroxytryptamine receptor 2A OS=Sus scrofa GN=HTR2A PE=2 SV=1

 Score = 95.5 bits (236), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 13/113 (11%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED--- 102
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   ED   
Sbjct: 308 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CN--EDVIG 358

Query: 103 -LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 359 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Sus scrofa (taxid: 9823)

>sp|P35363|5HT2A_MOUSE 5-hydroxytryptamine receptor 2A OS=Mus musculus GN=Htr2a PE=2 SV=1

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 9/113 (7%)

Query: 44  AQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPE 101
           A RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   +  
Sbjct: 307 AGRRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNENVIG 359

Query: 102 DLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 360 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENRKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Mus musculus (taxid: 10090)

>sp|P14842|5HT2A_RAT 5-hydroxytryptamine receptor 2A OS=Rattus norvegicus GN=Htr2a PE=2 SV=1

 Score = 95.1 bits (235), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 9/113 (7%)

Query: 44  AQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPE 101
           A RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   +  
Sbjct: 307 AGRRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNENVIG 359

Query: 102 DLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 360 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENRKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Rattus norvegicus (taxid: 10116)

>sp|P18599|5HT2A_CRIGR 5-hydroxytryptamine receptor 2A OS=Cricetulus griseus GN=HTR2A PE=2 SV=1

 Score = 94.7 bits (234), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 49/111 (44%), Positives = 70/111 (63%), Gaps = 9/111 (8%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPEDL 103
           RRT Q      S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   +   L
Sbjct: 309 RRTMQ------SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNEHVIGAL 361

Query: 104 GIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 362 LNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENRKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Cricetulus griseus (taxid: 10029)

>sp|Q5R4Q6|5HT2A_PONPY 5-hydroxytryptamine receptor 2A OS=Pongo pygmaeus GN=HTR2A PE=2 SV=1

 Score = 92.4 bits (228), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/113 (43%), Positives = 70/113 (61%), Gaps = 13/113 (11%)

Query: 46  RRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED--- 102
           RRT Q      S+  EQKA KVLG+VF  FV+ W PFF+  I+  IC     +  ED   
Sbjct: 309 RRTMQ------SISNEQKACKVLGIVFSLFVVMWCPFFITNIMAVICKE---SCNEDVIG 359

Query: 103 -LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
            L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct: 360 ALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 412

This is one of the several different receptors for 5-hydroxytryptamine (serotonin), a biogenic hormone that functions as a neurotransmitter, a hormone, and a mitogen. This receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger system. This receptor is involved in tracheal smooth muscle contraction, bronchoconstriction, and control of aldosterone production.

Pongo pygmaeus (taxid: 9600)

>sp|Q4LBB6|OCTB3_DROME Octopamine receptor beta-3R OS=Drosophila melanogaster GN=Octbeta3R PE=2 SV=4

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 1/126 (0%)

Query: 14   TKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFF 73
            T+F   R +   + ++ S N  R FK        T  +   A   + E KA++ LG++  
Sbjct: 1116 TRFWHKRTAAVTACWQQSKNRKRRFKTGCSHCGATGGSVRPAKGWKAEHKAARTLGIIMG 1175

Query: 74   TFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAF 133
             F+LCW PFFL  ++ ++C    C  P+ L +V  W+GYF+S LNP+IY  FNR FR AF
Sbjct: 1176 VFLLCWLPFFLWYVITSLCGPA-CPCPDVLVVVLFWIGYFNSTLNPLIYAYFNRDFREAF 1234

Query: 134  IRLLKC 139
               L+C
Sbjct: 1235 RNTLEC 1240

Receptor for octopamine. Octopamine (OA) is a neurotransmitter, neurohormone, and neuromodulator in invertebrates. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
328715655	681	PREDICTED: 5-hydroxytryptamine receptor	0.570	0.185	0.632	5e-41
91082069	165	PREDICTED: similar to Serotonin receptor	0.674	0.903	0.561	9e-40
195109995	947	GI24591 [Drosophila mojavensis] gi|19391	0.701	0.163	0.496	2e-37
350409668	665	PREDICTED: 5-hydroxytryptamine receptor	0.552	0.183	0.629	4e-37
24644034	930	serotonin receptor 2, isoform B [Drosoph	0.583	0.138	0.578	5e-37
223976009	393	MIP06036p [Drosophila melanogaster]	0.583	0.328	0.578	5e-37
390178721	964	GA10393 [Drosophila pseudoobscura pseudo	0.583	0.133	0.578	6e-37
383848743	643	PREDICTED: 5-hydroxytryptamine receptor	0.615	0.211	0.579	1e-36
16768736	295	HL07802p [Drosophila melanogaster]	0.583	0.437	0.578	1e-36
195497110	689	GE25425 [Drosophila yakuba] gi|194182064	0.583	0.187	0.578	1e-36

>gi|328715655|ref|XP_001947553.2| PREDICTED: 5-hydroxytryptamine receptor 2B-like [Acyrthosiphon pisum]

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 105/136 (77%), Gaps = 10/136 (7%)

Query: 44  AQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDL 103
           A R+ RQ+  AAN+VRTEQKASKVLG+VFFTFVLCW+PFFLL I+ A+CP   C +P+ +
Sbjct: 487 ANRQKRQSLAAANAVRTEQKASKVLGVVFFTFVLCWSPFFLLNIVFAVCPKESCPVPDHV 546

Query: 104 GIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDR------- 156
             VCLWLGY SS +NPIIYTIFN+TFRAAFIRLLKC+C + T+P RYRSV D        
Sbjct: 547 TEVCLWLGYVSSTINPIIYTIFNKTFRAAFIRLLKCRCHK-TRPHRYRSVTDNRHSALIS 605

Query: 157 --ATASSGPATVPLTL 170
             + A++G ATVPL+L
Sbjct: 606 TPSGAAAGAATVPLSL 621

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91082069|ref|XP_966377.1| PREDICTED: similar to Serotonin receptor 2 CG1056-PB, partial [Tribolium castaneum]

 Score =  169 bits (427), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 87/155 (56%), Positives = 114/155 (73%), Gaps = 6/155 (3%)

Query: 47  RTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIV 106
           R ++ + AANSV TEQKASKVLGLVFFTFVLCWAPFF+L IL A CP   C +PE + +V
Sbjct: 5   RVKRKTMAANSVATEQKASKVLGLVFFTFVLCWAPFFILNILFAACPD--CDVPEHVVVV 62

Query: 107 CLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASS--GPA 164
           CLWLGY SS +NPIIYT+FN+TFRAAFIRLL C+C ++++P+RYRSVN+   A+S   P+
Sbjct: 63  CLWLGYVSSTINPIIYTVFNKTFRAAFIRLLLCRCHRLSRPVRYRSVNENRGAASLCTPS 122

Query: 165 TVPL--TLPPTPGRTLSVSMQDVSHTYPTNTKKQE 197
            +PL  +L  TP  T + +      T  TN ++++
Sbjct: 123 ALPLAISLQGTPLLTPASTESSYVRTPSTNFRERD 157

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195109995|ref|XP_001999567.1| GI24591 [Drosophila mojavensis] gi|193916161|gb|EDW15028.1| GI24591 [Drosophila mojavensis]

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/165 (49%), Positives = 110/165 (66%), Gaps = 10/165 (6%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R ++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +
Sbjct: 785 NLRFLNNRAKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQV 842

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +  +A
Sbjct: 843 PEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCERSGRPLRYRSVTEGRSA 902

Query: 160 SS--GPATVPLTLP------PTPGRTLSVSMQDVSHTYPTNTKKQ 196
            S   P+ +PL +        TP  T +  + +   +Y  N  ++
Sbjct: 903 LSLCAPSALPLAISFQGAPLMTPSTTNATPLSEFRSSYTINEDER 947

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350409668|ref|XP_003488809.1| PREDICTED: 5-hydroxytryptamine receptor 2B-like [Bombus impatiens]

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 80/127 (62%), Positives = 94/127 (74%), Gaps = 5/127 (3%)

Query: 47  RTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIV 106
           RT++ S AAN+V TEQKASKVLGLVFFTFVLCWAPFFLL I  A CP   C++P  +   
Sbjct: 492 RTKRRSLAANAVATEQKASKVLGLVFFTFVLCWAPFFLLNIFFAACPE--CSVPVHVVDT 549

Query: 107 CLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVND---RATASSGP 163
           CLWLGY SS +NP+IYTIFNRTFRAAFIRLLKCKC +  +P RYRSV +    A +   P
Sbjct: 550 CLWLGYVSSTINPVIYTIFNRTFRAAFIRLLKCKCSRSARPARYRSVTEGGRNAMSLCTP 609

Query: 164 ATVPLTL 170
             +PL +
Sbjct: 610 TALPLVI 616

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24644034|ref|NP_730859.1| serotonin receptor 2, isoform B [Drosophila melanogaster] gi|23170474|gb|AAN13284.1| serotonin receptor 2, isoform B [Drosophila melanogaster]

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R+++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +
Sbjct: 767 NLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQV 824

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +   A
Sbjct: 825 PEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLRYRSVTEGRGA 884

Query: 160 SS--GPATVPLTL 170
            S   P+ +PL +
Sbjct: 885 LSLCAPSALPLAI 897

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|223976009|gb|ACN32192.1| MIP06036p [Drosophila melanogaster]

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R+++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +
Sbjct: 230 NLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQV 287

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +   A
Sbjct: 288 PEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLRYRSVTEGRGA 347

Query: 160 SS--GPATVPLTL 170
            S   P+ +PL +
Sbjct: 348 LSLCAPSALPLAI 360

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|390178721|ref|XP_001359252.3| GA10393 [Drosophila pseudoobscura pseudoobscura] gi|388859565|gb|EAL28397.3| GA10393 [Drosophila pseudoobscura pseudoobscura]

 Score =  159 bits (403), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R+++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +
Sbjct: 802 NLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQV 859

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +   A
Sbjct: 860 PEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCERSGRPLRYRSVTEGRGA 919

Query: 160 SS--GPATVPLTL 170
            S   P+ +PL +
Sbjct: 920 LSLCAPSALPLAI 932

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383848743|ref|XP_003700007.1| PREDICTED: 5-hydroxytryptamine receptor 2A-like [Megachile rotundata]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/145 (57%), Positives = 100/145 (68%), Gaps = 9/145 (6%)

Query: 47  RTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIV 106
           RT++ S AAN+V TEQKASKVLGLVFFTFVLCWAPFFLL I  A CP   C++P  +   
Sbjct: 470 RTKRRSMAANAVATEQKASKVLGLVFFTFVLCWAPFFLLNIFFAACPE--CSVPVHVVDT 527

Query: 107 CLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSGPATV 166
           CLWLGY SS +NP+IYTIFN+TFRAAFIRLLKCKC +  +P RYRSV +    +    T 
Sbjct: 528 CLWLGYMSSTINPVIYTIFNKTFRAAFIRLLKCKCSRSARPTRYRSVTEGGRNAMSLCT- 586

Query: 167 PLTLPPTPGRTLSVSMQDVSHTYPT 191
           P  LP      L++S+Q      PT
Sbjct: 587 PTALP------LAISLQGTPLLTPT 605

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|16768736|gb|AAL28587.1| HL07802p [Drosophila melanogaster]

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 99/133 (74%), Gaps = 4/133 (3%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R+++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +
Sbjct: 132 NLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQV 189

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +   A
Sbjct: 190 PEHVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLRYRSVTEGRGA 249

Query: 160 SS--GPATVPLTL 170
            S   P+ +PL +
Sbjct: 250 LSLCAPSALPLAI 262

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195497110|ref|XP_002095963.1| GE25425 [Drosophila yakuba] gi|194182064|gb|EDW95675.1| GE25425 [Drosophila yakuba]

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 4/133 (3%)

Query: 40  HIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTI 99
           +++    R+++ S +AN+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ AICP   C +
Sbjct: 528 NLRFLNNRSKRNSLSANAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAICPE--CRV 585

Query: 100 PEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATA 159
           PE +   CLWLGY SS +NPIIYTIFNRTFRAAFIRLLKC C +  +P+R+RSV +   A
Sbjct: 586 PERVVNTCLWLGYVSSTINPIIYTIFNRTFRAAFIRLLKCNCERSGRPLRFRSVTEGRGA 645

Query: 160 SS--GPATVPLTL 170
            S   P+ +PL +
Sbjct: 646 LSLCAPSALPLAI 658

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	221
FB|FBgn0087012	930	5-HT2 "Serotonin receptor 2" [	0.470	0.111	0.669	2.8e-33
ZFIN|ZDB-GENE-070912-500	402	htr2a "5-hydroxytryptamine (se	0.443	0.243	0.46	3.4e-21
ZFIN|ZDB-GENE-120215-60	458	si:dkey-276l13.4 "si:dkey-276l	0.592	0.286	0.391	3.9e-20
UNIPROTKB|Q75Z89	470	HTR2A "5-hydroxytryptamine rec	0.438	0.206	0.46	9.2e-20
UNIPROTKB|E1BVI5	468	HTR2A "5-hydroxytryptamine (Se	0.438	0.207	0.44	1.5e-19
UNIPROTKB|P28223	471	HTR2A "5-hydroxytryptamine rec	0.556	0.261	0.384	1.5e-19
UNIPROTKB|O46635	470	HTR2A "5-hydroxytryptamine rec	0.429	0.202	0.460	2.5e-19
UNIPROTKB|F1RK09	470	HTR2A "5-hydroxytryptamine rec	0.429	0.202	0.460	2.5e-19
UNIPROTKB|P50129	470	HTR2A "5-hydroxytryptamine rec	0.429	0.202	0.460	2.5e-19
MGI|MGI:109521	471	Htr2a "5-hydroxytryptamine (se	0.565	0.265	0.375	3.3e-19

FB|FBgn0087012 5-HT2 "Serotonin receptor 2" [Drosophila melanogaster (taxid:7227)]

 Score = 373 (136.4 bits), Expect = 2.8e-33, P = 2.8e-33
 Identities = 71/106 (66%), Positives = 83/106 (78%)

Query:    56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSS 115
             N+V TEQKA+KVLGLVFFTFVLCW+PFF+L I+ A CP   C +PE +   CLWLGY SS
Sbjct:   783 NAVATEQKATKVLGLVFFTFVLCWSPFFILNIIFAACPE--CQVPEHVVNTCLWLGYVSS 840

Query:   116 ILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASS 161
              +NPIIYTIFNRTFRAAFIRLLKC C +  +P+RYRSV +   A S
Sbjct:   841 TINPIIYTIFNRTFRAAFIRLLKCNCKRSGRPLRYRSVTEGRGALS 886

GO:0005886 "plasma membrane" evidence=ISS;NAS;IDA

GO:0007377 "germ-band extension" evidence=IMP

GO:0007210 "serotonin receptor signaling pathway" evidence=ISS;NAS;TAS

GO:0004993 "serotonin receptor activity" evidence=ISS;NAS;TAS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0001587 "Gq/11-coupled serotonin receptor activity" evidence=NAS

GO:0008227 "G-protein coupled amine receptor activity" evidence=ISS

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

ZFIN|ZDB-GENE-070912-500 htr2a "5-hydroxytryptamine (serotonin) receptor 2A" [Danio rerio (taxid:7955)]

 Score = 251 (93.4 bits), Expect = 3.4e-21, P = 3.4e-21
 Identities = 46/100 (46%), Positives = 67/100 (67%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPEDLGIVCLWLGYFS 114
             S+  EQKASKVLG+VFF FV+ W PFF+  +L  +C    C   I   L  V +W+GY S
Sbjct:   257 SISNEQKASKVLGVVFFLFVVMWCPFFITNVLAVVCEPNACNANIMNRLLNVFVWVGYLS 316

Query:   115 SILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             S +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct:   317 SAVNPLVYTLFNKTYRSAFARYIRCQFHEEKKPLQLILVN 356

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007610 "behavior" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-120215-60 si:dkey-276l13.4 "si:dkey-276l13.4" [Danio rerio (taxid:7955)]

 Score = 244 (91.0 bits), Expect = 3.9e-20, P = 3.9e-20
 Identities = 56/143 (39%), Positives = 82/143 (57%)

Query:    29 KASANPHRLFKH--IKKXXXXXXXXXXXXNSVRTEQKASKVLGLVFFTFVLCWAPFFLLQ 86
             + S +  RLF    I +             S+  EQKASKVLG+VF  FV+ W PFF+  
Sbjct:   274 RGSVSSERLFSRSSICREGASRGSGRRSMQSISNEQKASKVLGVVFLLFVIMWCPFFVTN 333

Query:    87 ILQAICPTGYCTIPEDL--GI--VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCG 142
             ++  +C +  C   EDL  G+  V +W+GY SS +NP IYT+FN+T+RAAF R ++C+  
Sbjct:   334 VMAVVCGS-VCD--EDLVGGLMNVFVWVGYLSSAVNPFIYTLFNKTYRAAFARYMQCRYH 390

Query:   143 QVTKPIRYRSVND---RATASSG 162
             +  +P++   VN     A +SSG
Sbjct:   391 EERRPLQLILVNTIPPLAYSSSG 413

GO:0043198 "dendritic shaft" evidence=IEA

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0032962 "positive regulation of inositol trisphosphate biosynthetic process" evidence=IEA

GO:0046883 "regulation of hormone secretion" evidence=IEA

GO:0060402 "calcium ion transport into cytosol" evidence=IEA

GO:0006939 "smooth muscle contraction" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IEA

GO:0050795 "regulation of behavior" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0007610 "behavior" evidence=IEA

GO:1900482 "positive regulation of diacylglycerol biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|Q75Z89 HTR2A "5-hydroxytryptamine receptor 2A" [Bos taurus (taxid:9913)]

 Score = 241 (89.9 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 46/100 (46%), Positives = 67/100 (67%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT--IPEDLGIVCLWLGYFS 114
             S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   + E L  V +W+GY S
Sbjct:   313 SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CNRDVIEALLNVFVWIGYLS 371

Query:   115 SILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             S +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct:   372 SAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

GO:0005886 "plasma membrane" evidence=IEA

GO:0071886 "1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0051378 "serotonin binding" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E1BVI5 HTR2A "5-hydroxytryptamine (Serotonin) receptor 2A" [Gallus gallus (taxid:9031)]

 Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 44/100 (44%), Positives = 66/100 (66%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGI--VCLWLGYFS 114
             S+  EQKASKVLG+VFF FV+ W PFF+  ++  IC    C      G+  + +W+GY S
Sbjct:   311 SISNEQKASKVLGIVFFLFVVMWCPFFITNVMAVICKES-CNEEVIGGLLNIFVWIGYLS 369

Query:   115 SILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
             S +NP++YT+FN+T+R+AF R ++C+  +  KP +   VN
Sbjct:   370 SAVNPLVYTLFNKTYRSAFSRYIQCRYKEEKKPFQLILVN 409

GO:0016021 "integral to membrane" evidence=IEA

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0051378 "serotonin binding" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0071886 "1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding" evidence=IEA

UNIPROTKB|P28223 HTR2A "5-hydroxytryptamine receptor 2A" [Homo sapiens (taxid:9606)]

 Score = 239 (89.2 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 50/130 (38%), Positives = 76/130 (58%)

Query:    29 KASANPHRLFKHIKKXXXXXXXXXXXXNSVRTEQKASKVLGLVFFTFVLCWAPFFLLQIL 88
             ++S +  +LF+                 S+  EQKA KVLG+VFF FV+ W PFF+  I+
Sbjct:   286 QSSLSSEKLFQRSIHREPGSYTGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIM 345

Query:    89 QAICPTGYCTIPED-LGI---VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQV 144
               IC    C   ED +G    V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  + 
Sbjct:   346 AVICKES-CN--EDVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKEN 402

Query:   145 TKPIRYRSVN 154
              KP++   VN
Sbjct:   403 KKPLQLILVN 412

GO:0007613 "memory" evidence=IEA

GO:0008219 "cell death" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0014059 "regulation of dopamine secretion" evidence=IEA

GO:0019233 "sensory perception of pain" evidence=IEA

GO:0030431 "sleep" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0043267 "negative regulation of potassium ion transport" evidence=IEA

GO:0043406 "positive regulation of MAP kinase activity" evidence=IEA

GO:0045907 "positive regulation of vasoconstriction" evidence=IEA

GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=IEA

GO:0001659 "temperature homeostasis" evidence=IEA

GO:0001965 "G-protein alpha-subunit binding" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0006950 "response to stress" evidence=IEA

GO:0007208 "phospholipase C-activating serotonin receptor signaling pathway" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0007210 "serotonin receptor signaling pathway" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA;TAS

GO:0042493 "response to drug" evidence=IDA

GO:0008144 "drug binding" evidence=IDA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IDA;IMP

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=IMP

GO:0070371 "ERK1 and ERK2 cascade" evidence=IMP

GO:0051378 "serotonin binding" evidence=IDA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IMP

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IMP

GO:0004993 "serotonin receptor activity" evidence=IDA

GO:0071886 "1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding" evidence=IDA

GO:0007268 "synaptic transmission" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

UNIPROTKB|O46635 HTR2A "5-hydroxytryptamine receptor 2A" [Canis lupus familiaris (taxid:9615)]

 Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 47/102 (46%), Positives = 68/102 (66%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDL-GI---VCLWLGY 112
             S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   ED+ G    V +W+GY
Sbjct:   313 SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CN--EDIIGALLNVFVWIGY 369

Query:   113 FSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
              SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct:   370 LSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

GO:0007210 "serotonin receptor signaling pathway" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0051378 "serotonin binding" evidence=IDA

GO:0008144 "drug binding" evidence=IDA

GO:0004993 "serotonin receptor activity" evidence=IDA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IDA

GO:0042493 "response to drug" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1RK09 HTR2A "5-hydroxytryptamine receptor 2A" [Sus scrofa (taxid:9823)]

 Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 47/102 (46%), Positives = 68/102 (66%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED-LGI---VCLWLGY 112
             S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   ED +G    V +W+GY
Sbjct:   313 SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CN--EDVIGALLNVFVWIGY 369

Query:   113 FSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
              SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct:   370 LSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

GO:0071886 "1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=IEA

GO:0051378 "serotonin binding" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=IEA

GO:0042493 "response to drug" evidence=IEA

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=IEA

GO:0008144 "drug binding" evidence=IEA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|P50129 HTR2A "5-hydroxytryptamine receptor 2A" [Sus scrofa (taxid:9823)]

 Score = 237 (88.5 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 47/102 (46%), Positives = 68/102 (66%)

Query:    57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPED-LGI---VCLWLGY 112
             S+  EQKA KVLG+VFF FV+ W PFF+  I+  IC    C   ED +G    V +W+GY
Sbjct:   313 SISNEQKACKVLGIVFFLFVVMWCPFFITNIMAVICKES-CN--EDVIGALLNVFVWIGY 369

Query:   113 FSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
              SS +NP++YT+FN+T+R+AF R ++C+  +  KP++   VN
Sbjct:   370 LSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENKKPLQLILVN 411

GO:0005886 "plasma membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=IEA

MGI|MGI:109521 Htr2a "5-hydroxytryptamine (serotonin) receptor 2A" [Mus musculus (taxid:10090)]

 Score = 236 (88.1 bits), Expect = 3.3e-19, P = 3.3e-19
 Identities = 48/128 (37%), Positives = 74/128 (57%)

Query:    29 KASANPHRLFKHIKKXXXXXXXXXXXXNSVRTEQKASKVLGLVFFTFVLCWAPFFLLQIL 88
             ++S +  +LF+                 S+  EQKA KVLG+VFF FV+ W PFF+  I+
Sbjct:   286 QSSLSSEKLFQRSIHREPGSYAGRRTMQSISNEQKACKVLGIVFFLFVVMWCPFFITNIM 345

Query:    89 QAICPTGYCT--IPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTK 146
               IC    C   +   L  V +W+GY SS +NP++YT+FN+T+R+AF R ++C+  +  K
Sbjct:   346 AVICKES-CNENVIGALLNVFVWIGYLSSAVNPLVYTLFNKTYRSAFSRYIQCQYKENRK 404

Query:   147 PIRYRSVN 154
             P++   VN
Sbjct:   405 PLQLILVN 412

GO:0001659 "temperature homeostasis" evidence=ISO

GO:0001965 "G-protein alpha-subunit binding" evidence=ISO

GO:0004435 "phosphatidylinositol phospholipase C activity" evidence=ISO

GO:0004871 "signal transducer activity" evidence=IEA

GO:0004930 "G-protein coupled receptor activity" evidence=IEA

GO:0004993 "serotonin receptor activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005887 "integral to plasma membrane" evidence=IEA

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=ISO

GO:0006939 "smooth muscle contraction" evidence=IEA

GO:0006950 "response to stress" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007186 "G-protein coupled receptor signaling pathway" evidence=IEA;ISO

GO:0007208 "phospholipase C-activating serotonin receptor signaling pathway" evidence=ISO

GO:0007210 "serotonin receptor signaling pathway" evidence=ISO

GO:0007610 "behavior" evidence=IEA

GO:0007613 "memory" evidence=ISO

GO:0008144 "drug binding" evidence=ISO

GO:0008219 "cell death" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO

GO:0014059 "regulation of dopamine secretion" evidence=ISO

GO:0014065 "phosphatidylinositol 3-kinase cascade" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0019233 "sensory perception of pain" evidence=ISO

GO:0030425 "dendrite" evidence=ISO

GO:0030431 "sleep" evidence=ISO

GO:0032403 "protein complex binding" evidence=ISO

GO:0032962 "positive regulation of inositol trisphosphate biosynthetic process" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IEA

GO:0042493 "response to drug" evidence=ISO

GO:0043198 "dendritic shaft" evidence=ISO

GO:0043267 "negative regulation of potassium ion transport" evidence=ISO

GO:0043406 "positive regulation of MAP kinase activity" evidence=ISO

GO:0045907 "positive regulation of vasoconstriction" evidence=ISO

GO:0046883 "regulation of hormone secretion" evidence=IEA

GO:0050795 "regulation of behavior" evidence=IEA

GO:0050880 "regulation of blood vessel size" evidence=IEA

GO:0051209 "release of sequestered calcium ion into cytosol" evidence=ISO

GO:0051378 "serotonin binding" evidence=ISO

GO:0051967 "negative regulation of synaptic transmission, glutamatergic" evidence=ISO

GO:0060402 "calcium ion transport into cytosol" evidence=IEA

GO:0070371 "ERK1 and ERK2 cascade" evidence=ISO

GO:0071886 "1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding" evidence=ISO

GO:1900482 "positive regulation of diacylglycerol biosynthetic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	221
pfam00001	251	pfam00001, 7tm_1, 7 transmembrane receptor (rhodop	6e-22
pfam10323	283	pfam10323, 7TM_GPCR_Srv, Serpentine type 7TM GPCR	0.003

>gnl|CDD|215646 pfam00001, 7tm_1, 7 transmembrane receptor (rhodopsin family)

 Score = 90.1 bits (224), Expect = 6e-22
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 36  RLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG 95
            + + ++K  R     + A  S   E+KA+K+L +V   FVLCW P+ ++ +L ++CP  
Sbjct: 165 LILRTLRKRARSGASQARAKRSSSKERKAAKMLLVVVVVFVLCWLPYHIVLLLDSLCPLS 224

Query: 96  YCTIPEDLGIVCLWLGYFSSILNPIIY 122
              +     ++ LWL Y +S LNPIIY
Sbjct: 225 IWRLLPTALLITLWLAYVNSCLNPIIY 251

This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins. Length = 251

>gnl|CDD|220691 pfam10323, 7TM_GPCR_Srv, Serpentine type 7TM GPCR chemoreceptor Srv

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 31/111 (27%), Positives = 43/111 (38%), Gaps = 21/111 (18%)

Query: 37  LFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPF--FLLQILQAICPT 94
           LF  I+K     + + T + S++ E      + L F  F+L  A     +  IL      
Sbjct: 186 LFFVIRKKF--NKNSQTKSKSLKRE------VRLAFQVFILVLAFLIILIFYILSNYFSQ 237

Query: 95  GYCTIPEDLGIVCLWLGY------FSSILNPIIYTIFNRTFRAAFIRLLKC 139
              T   D  I  L   Y       S I NP +  IFNR  R    ++LKC
Sbjct: 238 ---TQNTDP-IFYLRALYPIASGLLSYI-NPYLLLIFNRDLRKQVRKMLKC 283

Chemoreception is mediated in Caenorhabditis elegans by members of the seven-transmembrane G-protein-coupled receptor class (7TM GPCRs) of proteins which are of the serpentine type. Srv is a member of the Srg superfamily of chemoreceptors. Chemoperception is one of the central senses of soil nematodes like C. elegans which are otherwise 'blind' and 'deaf'. Length = 283

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	221
3pbl_A	481	Structure Of The Human Dopamine D3 Receptor In Comp		1e-15
3rze_A	452	Structure Of The Human Histamine H1 Receptor In Com		2e-12
4daj_A	479	Structure Of The M3 Muscarinic Acetylcholine Recept		2e-09
3sn6_R	514	Crystal Structure Of The Beta2 Adrenergic Receptor-		6e-09
3p0g_A	501	Structure Of A Nanobody-Stabilized Active State Of		7e-09
2rh1_A	500	High Resolution Crystal Structure Of Human B2-Adren		8e-09
3d4s_A	490	Cholesterol Bound Form Of Human Beta2 Adrenergic Re		1e-08
2r4r_A	365	Crystal Structure Of The Human Beta2 Adrenoceptor L		2e-08
3kj6_A	366	Crystal Structure Of A Methylated Beta2 Adrenergic		2e-08
2y00_B	315	Turkey Beta1 Adrenergic Receptor With Stabilising M		2e-08
3pds_A	458	Irreversible Agonist-Beta2 Adrenoceptor Complex Len		2e-08
2vt4_A	313	Turkey Beta1 Adrenergic Receptor With Stabilising M		2e-08
2r4s_A	342	Crystal Structure Of The Human Beta2 Adrenoceptor L		3e-08
4gbr_A	309	N-terminal T4 Lysozyme Fusion Facilitates Crystalli		7e-08
3uon_A	467	Structure Of The Human M2 Muscarinic Acetylcholine		6e-07
3v2w_A	520	Crystal Structure Of A Lipid G Protein-Coupled Rece		2e-06
2ks9_A	364	Solution Conformation Of Substance P In Water Compl		4e-05
3eml_A	488	The 2.6 A Crystal Structure Of A Human A2a Adenosin		1e-04
4grv_A	510	The Crystal Structure Of The Neurotensin Receptor N		2e-04
4eiy_A	447	Crystal Structure Of The Chimeric Protein Of A2aar-		2e-04
4djh_A	480	Structure Of The Human Kappa Opioid Receptor In Com		7e-04

>pdb|3PBL|A Chain A, Structure Of The Human Dopamine D3 Receptor In Complex With Eticlopride Length = 481

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E+KA++++ +V   F++CW PFFL  +L   C T  C +  +L     WLGY +S LNP+
Sbjct: 396 EKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQT--CHVSPELYSATTWLGYVNSALNPV 453
Query: 121 IYTIFNRTFRAAFIRLLKC 139
           IYT FN  FR AF+++L C
Sbjct: 454 IYTTFNIEFRKAFLKILSC 472

>pdb|3RZE|A Chain A, Structure Of The Human Histamine H1 Receptor In Complex With Doxepin Length = 452

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E+KA+K LG +   F+LCW P+F+  ++ A C    C   E L +  +WLGY +S LNP+
Sbjct: 368 ERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC-CN--EHLHMFTIWLGYINSTLNPL 424
Query: 121 IYTIFNRTFRAAFIRLLKCKCGQ 143
           IY + N  F+  F R+L  + G+
Sbjct: 425 IYPLCNENFKKTFKRILHIRSGE 447

>pdb|4DAJ|A Chain A, Structure Of The M3 Muscarinic Acetylcholine Receptor Length = 479

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E+KA++ L  +   F++ W P+ ++ ++   C +    IP+    +  WL Y +S +NP+
Sbjct: 369 EKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDS---CIPKTYWNLGYWLCYINSTVNPV 425
Query: 121 IYTIFNRTFRAAFIRLLKCKC 141
            Y + N+TFR  F  LL C+C
Sbjct: 426 CYALCNKTFRTTFKTLLLCQC 446

>pdb|3SN6|R Chain R, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 514

Iteration: 1
 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 417 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 473
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 474 IYC-RSPDFRIAFQELL 489

>pdb|3P0G|A Chain A, Structure Of A Nanobody-Stabilized Active State Of The Beta2 Adrenoceptor Length = 501

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 404 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 460
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 461 IYC-RSPDFRIAFQELL 476

>pdb|2RH1|A Chain A, High Resolution Crystal Structure Of Human B2-Adrenergic G Protein- Coupled Receptor Length = 500

Iteration: 1
 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 403 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 459
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 460 IYC-RSPDFRIAFQELL 475

>pdb|3D4S|A Chain A, Cholesterol Bound Form Of Human Beta2 Adrenergic Receptor. Length = 490

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 404 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 460
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 461 IYC-RSPDFRIAFQELL 476

>pdb|2R4R|A Chain A, Crystal Structure Of The Human Beta2 Adrenoceptor Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 268 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 324
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 325 IYC-RSPDFRIAFQELL 340

>pdb|3KJ6|A Chain A, Crystal Structure Of A Methylated Beta2 Adrenergic Receptor- Fab Complex Length = 366

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 269 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 325
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 326 IYC-RSPDFRIAFQELL 341

>pdb|2Y00|B Chain B, Turkey Beta1 Adrenergic Receptor With Stabilising Mutations And Bound Partial Agonist Dobutamine (Crystal Dob92) Length = 315

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++   F LCW PFFL+ I+          +P+ L +   WLGY +S +NPI
Sbjct: 227 EHKALKTLGIIMGVFTLCWLPFFLVNIVNVF---NRDLVPDWLFVAFNWLGYANSAMNPI 283
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF RLL
Sbjct: 284 IYC-RSPDFRKAFKRLL 299

>pdb|3PDS|A Chain A, Irreversible Agonist-Beta2 Adrenoceptor Complex Length = 458

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 372 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 428
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 429 IYC-RSPDFRIAFQELL 444

>pdb|2VT4|A Chain A, Turkey Beta1 Adrenergic Receptor With Stabilising Mutations And Bound Cyanopindolol Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++   F LCW PFFL+ I+          +P+ L +   WLGY +S +NPI
Sbjct: 225 EHKALKTLGIIMGVFTLCWLPFFLVNIVNVF---NRDLVPDWLFVAFNWLGYANSAMNPI 281
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF RLL
Sbjct: 282 IYC-RSPDFRKAFKRLL 297

>pdb|2R4S|A Chain A, Crystal Structure Of The Human Beta2 Adrenoceptor Length = 342

Iteration: 1
 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 245 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 301
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 302 IYC-RSPDFRIAFQELL 317

>pdb|4GBR|A Chain A, N-terminal T4 Lysozyme Fusion Facilitates Crystallization Of A G Protein Coupled Receptor Length = 309

Iteration: 1
 Score = 53.9 bits (128), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+
Sbjct: 212 EHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPL 268
Query: 121 IYTIFNRTFRAAFIRLL 137
           IY   +  FR AF  LL
Sbjct: 269 IYC-RSPDFRIAFQELL 284

>pdb|3UON|A Chain A, Structure Of The Human M2 Muscarinic Acetylcholine Receptor Bound To An Antagonist Length = 467

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E+K ++ +  +   F++ WAP+ ++ ++   C      IP  +  +  WL Y +S +NP 
Sbjct: 383 EKKVTRTILAILLAFIITWAPYNVMVLINTFCAP---CIPNTVWTIGYWLCYINSTINPA 439
Query: 121 IYTIFNRTFRAAFIRLLKC 139
            Y + N TF+  F  LL C
Sbjct: 440 CYALCNATFKKTFKHLLMC 458

>pdb|3V2W|A Chain A, Crystal Structure Of A Lipid G Protein-Coupled Receptor At 3.35a Length = 520

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 66  KVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIF 125
           K + +V   F+ CWAP F+L +L   C    C I        L L   +S  NPIIYT+ 
Sbjct: 421 KTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFR-AEYFLVLAVLNSGTNPIIYTLT 479
Query: 126 NRTFRAAFIRLL 137
           N+  R AFIR++
Sbjct: 480 NKEMRRAFIRIM 491

>pdb|2KS9|A Chain A, Solution Conformation Of Substance P In Water Complexed With Nk1r Length = 364

Iteration: 1
 Score = 44.7 bits (104), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 74  TFVLCWAPFFLLQILQAICPTGYCT-IPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAA 132
           TF +CW PF +  +L  I P  Y     + + +  +WL   S++ NPIIY   N  FR  
Sbjct: 256 TFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLG 315
Query: 133 FIRLLKC 139
           F    +C
Sbjct: 316 FKHAFRC 322

>pdb|3EML|A Chain A, The 2.6 A Crystal Structure Of A Human A2a Adenosine Receptor Bound To Zm241385. Length = 488

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 56  NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT-IPEDLGIVCLWLGYFS 114
           ++++ E  A+K L ++   F LCW P  ++      CP   C+  P  L  + + L + +
Sbjct: 385 STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD--CSHAPLWLMYLAIVLSHTN 442
Query: 115 SILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIR 149
           S++NP IY    R FR  F ++++    +  +P +
Sbjct: 443 SVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK 477

>pdb|4GRV|A Chain A, The Crystal Structure Of The Neurotensin Receptor Nts1 In Complex With Neurotensin (8-13) Length = 510

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 57  SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLW------- 109
           SV+  +    V   V   FV+CW P+ + +++       +C I ++     L+       
Sbjct: 400 SVQALRHGVLVARAVVIAFVVCWLPYHVRRLM-------FCYISDEQWTTFLFDFYHYFY 452
Query: 110 -----LGYFSSILNPIIYTIFNRTFRAAFIRLLKCKC 141
                L Y SS +NPI+Y + +  FR  F+  L C C
Sbjct: 453 MLTNALAYASSAINPILYNLVSANFRQVFLSTLACLC 489

>pdb|4EIY|A Chain A, Crystal Structure Of The Chimeric Protein Of A2aar-Bril In Complex With Zm241385 At 1.8a Resolution Length = 447

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 56  NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCT-IPEDLGIVCLWLGYFS 114
           ++++ E  A+K L ++   F LCW P  ++      CP   C+  P  L  + + L + +
Sbjct: 344 STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPD--CSHAPLWLMYLAIVLSHTN 401
Query: 115 SILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIR 149
           S++NP IY    R FR  F ++++    +  +P +
Sbjct: 402 SVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPFK 436

>pdb|4DJH|A Chain A, Structure Of The Human Kappa Opioid Receptor In Complex With Jdtic Length = 480

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 77  LCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAF 133
           +CW P  +  +++A+  T + T        C+ LGY +S LNPI+Y   +  F+  F
Sbjct: 407 VCWTPIHIFILVEALGSTSHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCF 463

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	221
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	7e-32
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	9e-31
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	4e-30
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	6e-30
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	7e-30
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	2e-29
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	7e-28
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	8e-28
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	2e-26
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	3e-19
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	5e-19
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	5e-17
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	5e-17
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	3e-16
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	8e-12
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, protein structure initiative, AC technologies center for gene to 3D structure; HET: ETQ MAL; 2.89A {Homo sapiens} Length = 481

 Score =  119 bits (300), Expect = 7e-32
 Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 6/136 (4%)

Query: 10  VPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQAST----AANSVRTEQKAS 65
             F       ++          A      +   +A+R      T    A      E+KA+
Sbjct: 341 AGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKAT 400

Query: 66  KVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIF 125
           +++ +V   F++CW PFFL  +L   C T  C +  +L     WLGY +S LNP+IYT F
Sbjct: 401 QMVAIVLGAFIVCWLPFFLTHVLNTHCQT--CHVSPELYSATTWLGYVNSALNPVIYTTF 458

Query: 126 NRTFRAAFIRLLKCKC 141
           N  FR AF+++L C  
Sbjct: 459 NIEFRKAFLKILSCGR 474

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A* Length = 488

 Score =  116 bits (292), Expect = 9e-31
 Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 1/141 (0%)

Query: 18  PGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVL 77
              E+          N             RT       ++++ E  A+K L ++   F L
Sbjct: 347 RWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFAL 406

Query: 78  CWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL 137
           CW P  ++      CP      P  L  + + L + +S++NP IY    R FR  F +++
Sbjct: 407 CWLPLHIINCFTFFCPD-CSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKII 465

Query: 138 KCKCGQVTKPIRYRSVNDRAT 158
           +    +  +P +    +    
Sbjct: 466 RSHVLRQQEPFKAHHHHHHHH 486

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A Length = 447

 Score =  114 bits (286), Expect = 4e-30
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 3/152 (1%)

Query: 1   MRVSFRERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRT 60
           M+      ++         + +      +A A   +L        ++  + + +  +++ 
Sbjct: 291 MKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLERARS--TLQK 348

Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E  A+K L ++   F LCW P  ++      CP      P  L  + + L + +S++NP 
Sbjct: 349 EVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPF 407

Query: 121 IYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRS 152
           IY    R FR  F ++++    +  +P +   
Sbjct: 408 IYAYRIREFRQTFRKIIRSHVLRQQEPFKAHH 439

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A* Length = 467

 Score =  114 bits (286), Expect = 6e-30
 Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 8/141 (5%)

Query: 6   RERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRT-----RQASTAANSVRT 60
            E  V   T  +   +         +    R +       +R           A      
Sbjct: 323 GETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSR 382

Query: 61  EQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPI 120
           E+K ++ +  +   F++ WAP+ ++ ++   C      IP  +  +  WL Y +S +NP 
Sbjct: 383 EKKVTRTILAILLAFIITWAPYNVMVLINTFCA---PCIPNTVWTIGYWLCYINSTINPA 439

Query: 121 IYTIFNRTFRAAFIRLLKCKC 141
            Y + N TF+  F  LL C  
Sbjct: 440 CYALCNATFKKTFKHLLMCHY 460

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens} Length = 452

 Score =  114 bits (285), Expect = 7e-30
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 4/138 (2%)

Query: 6   RERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKAS 65
              N   M +     E+          N             RT       + +  E+KA+
Sbjct: 314 GFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLH-MNRERKAA 372

Query: 66  KVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIF 125
           K LG +   F+LCW P+F+  ++ A C        E L +  +WLGY +S LNP+IY + 
Sbjct: 373 KQLGFIMAAFILCWIPYFIFFMVIAFCK---NCCNEHLHMFTIWLGYINSTLNPLIYPLC 429

Query: 126 NRTFRAAFIRLLKCKCGQ 143
           N  F+  F R+L  + G+
Sbjct: 430 NENFKKTFKRILHIRSGE 447

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A* Length = 500

 Score =  113 bits (284), Expect = 2e-29
 Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 2   RVSFRERNVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTE 61
              F         K               +  P+R  + I   +  T  A         E
Sbjct: 347 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAY---KFCLKE 403

Query: 62  QKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPII 121
            KA K LG++  TF LCW PFF++ I+  I       I +++ I+  W+GY +S  NP+I
Sbjct: 404 HKALKTLGIIMGTFTLCWLPFFIVNIVHVIQD---NLIRKEVYILLNWIGYVNSGFNPLI 460

Query: 122 YTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRATASSG 162
           Y   +  FR AF  LL  +   +       S N      SG
Sbjct: 461 YC-RSPDFRIAFQELLCLRRSSLKAYGNGYSSNGNTGEQSG 500

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A Length = 514

 Score =  108 bits (272), Expect = 7e-28
 Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 31  SANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQA 90
                +    +++  R       ++     E KA K LG++  TF LCW PFF++ I+  
Sbjct: 387 GRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHV 446

Query: 91  ICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRY 150
           I       I +++ I+  W+GY +S  NP+IY   +  FR AF  LL  +   +      
Sbjct: 447 IQD---NLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCLRRSSLKAYGNG 502

Query: 151 RSVNDRATASSG 162
            S N      SG
Sbjct: 503 YSSNGNTGEQSG 514

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A* Length = 520

 Score =  109 bits (272), Expect = 8e-28
 Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 1/121 (0%)

Query: 21  ESPPPSGYKASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWA 80
           E+          N             RT      A+         K + +V   F+ CWA
Sbjct: 376 EAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYASRSSENVALLKTVIIVLSVFIACWA 435

Query: 81  PFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCK 140
           P F+L +L   C    C I        L L   +S  NPIIYT+ N+  R AFIR++   
Sbjct: 436 PLFILLLLDVGCKVKTCDILF-RAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRP 494

Query: 141 C 141
            
Sbjct: 495 L 495

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A* Length = 315

 Score =  102 bits (257), Expect = 2e-26
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 36  RLFKHIKKAQRRTRQA---STAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAIC 92
           R+++  K+  R+  +A    T+   +  E KA K LG++   F LCW PFFL+ I+    
Sbjct: 199 RVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFN 258

Query: 93  PTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKC 141
                 +P+ L +   WLGY +S +NPIIY   +  FR AF RLL    
Sbjct: 259 R---DLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLAFPR 303

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A Length = 364

 Score = 83.6 bits (207), Expect = 3e-19
 Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 1/144 (0%)

Query: 36  RLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG 95
            +   +  ++     +      V  ++K  K++ +V  TF +CW PF +  +L  I P  
Sbjct: 218 VVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDL 277

Query: 96  YCT-IPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVN 154
           Y     + + +  +WL   S++ NPIIY   N  FR  F    +C             + 
Sbjct: 278 YLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMK 337

Query: 155 DRATASSGPATVPLTLPPTPGRTL 178
                 +  +   ++   T   T+
Sbjct: 338 STRYLQTQGSVYKVSRLETTISTV 361

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A* Length = 448

 Score = 78.0 bits (192), Expect = 5e-17
 Identities = 22/173 (12%), Positives = 52/173 (30%), Gaps = 11/173 (6%)

Query: 36  RLFKHIKKAQRRTRQASTAANS---------VRTEQKASKVLGLVFFTFVLCWAPFFLLQ 86
            +   +   ++     +   N+            E + +K+  ++   F+L W+P+ ++ 
Sbjct: 222 NIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVA 281

Query: 87  ILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTK 146
           +L    P     +      + +     S+I NP+IY++ +  FR A  +           
Sbjct: 282 LLAQFGPL--EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQF 339

Query: 147 PIRYRSVNDRATASSGPATVPLTLPPTPGRTLSVSMQDVSHTYPTNTKKQEAG 199
             +    +  A             P      +   M  +             G
Sbjct: 340 DDKETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAYPPQG 392

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ... Length = 349

 Score = 77.4 bits (191), Expect = 5e-17
 Identities = 23/129 (17%), Positives = 56/129 (43%), Gaps = 5/129 (3%)

Query: 36  RLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG 95
           +L   +K+A  + +++   A + + E++ ++++ ++   F++CW P+  +          
Sbjct: 226 QLVFTVKEAAAQQQES---ATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGS 282

Query: 96  YCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVND 155
                     +  +    S++ NP+IY + N+ FR   +  L C    +       +V+ 
Sbjct: 283 D--FGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSK 340

Query: 156 RATASSGPA 164
             T+   PA
Sbjct: 341 TETSQVAPA 349

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A* Length = 464

 Score = 75.8 bits (186), Expect = 3e-16
 Identities = 22/103 (21%), Positives = 43/103 (41%)

Query: 45  QRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLG 104
                    A    R  ++ ++++ +V   F++CW P  +  I++A+      T      
Sbjct: 362 TTFRTGTWDAYEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSW 421

Query: 105 IVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKP 147
             C+ LGY +S LNP++Y   +  F+  F          + +P
Sbjct: 422 HFCIALGYTNSCLNPVLYAFLDENFKRCFREFCIPTSSTIEQP 464

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B* Length = 502

 Score = 62.6 bits (152), Expect = 8e-12
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 9/117 (7%)

Query: 30  ASANPHRLFKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQ 89
            +  P+R  + I   +  T  A  +    +  +KA K   ++   F  CW P+++   + 
Sbjct: 379 YNQTPNRAKRVITTFRTGTWDAYGSKGHQK--RKALKTTVILILAFFACWLPYYIGISID 436

Query: 90  AICPTGY----CTIPEDLGI---VCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC 139
           +          C     +     +   L +F   LNPI+Y      F+ +    L  
Sbjct: 437 SFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTS 493

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 2e-05
 Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 60/216 (27%)

Query: 3   VSFRER----NVPFMTKFVPGRESPPPSGYKASANPHRLFKHIKKAQRRTRQA------- 51
           +  R+R    N  F    V  R  P              +  +++A    R A       
Sbjct: 113 IEQRDRLYNDNQVFAKYNVS-RLQP--------------YLKLRQALLELRPAKNVLIDG 157

Query: 52  ------ST-AANSVRTEQKASKVLGLVF-FTFVLCWAPFFLLQILQAIC----------P 93
                 +  A +   + +   K+   +F      C +P  +L++LQ +            
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 94  TGYCTIPEDLGIVCLWL-------GYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTK 146
                I   +  +   L        Y + +L  ++  + N     AF   L CK   +T 
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLL--VLLNVQNAKAWNAF--NLSCKI-LLTT 272

Query: 147 PIRYRSVNDRATASSG--PATVPLTLPPTPGRTLSV 180
             R++ V D  +A++    +    ++  TP    S+
Sbjct: 273 --RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	221
4grv_A	510	Neurotensin receptor type 1, lysozyme chimera; G-p	99.84
2rh1_A	500	Beta-2-adrenergic receptor/T4-lysozyme chimera; GP	99.77
4eiy_A	447	Adenosine receptor A2A/soluble cytochrome B562 CH;	99.76
2ks9_A	364	Substance-P receptor; water, autodock, NK1, neurop	99.75
3eml_A	488	Human adenosine A2A receptor/T4 lysozyme chimera;	99.74
3vw7_A	484	Proteinase-activated receptor 1, lysozyme; high re	99.74
4dkl_A	464	MU-type opioid receptor, lysozyme chimera; G-prote	99.73
3v2y_A	520	Sphingosine 1-phosphate receptor 1, lysozyme CHIM;	99.72
3pbl_A	481	D(3) dopamine receptor, lysozyme chimera; structur	99.71
3uon_A	467	Human M2 muscarinic acetylcholine, receptor T4 LY	99.71
1u19_A	349	Rhodopsin; G protein-coupled receptor, membrane pr	99.7
3rze_A	452	Histamine H1 receptor, lysozyme chimera; structura	99.7
2lnl_A	296	C-X-C chemokine receptor type 1; G protein coupled	99.69
4amj_A	315	Beta-1 adrenergic receptor; membrane protein, 7TMR	99.67
3sn6_R	514	Lysozyme, beta-2 adrenergic receptor; seven transm	99.65
3odu_A	502	C-X-C chemokine receptor type 4, lysozyme chimera;	99.64
2z73_A	448	Rhodopsin; visual pigment, GQ-type, G-protein coup	99.64
4ea3_A	434	Fusion protein of nociceptin receptor and cytochr;	99.64
2koe_A	40	Human cannabinoid receptor 1 - helix 7/8 peptide;	99.02
2ki9_A	33	Cannabinoid receptor 2; GPCR, G-protein coupled re	98.67

>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}

Probab=99.84  E-value=5.1e-22  Score=177.72  Aligned_cols=91  Identities=25%  Similarity=0.503  Sum_probs=65.5

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcc-----cccchHHHHHHHHHhhccchhhHHHHhccHH
Q psy3683          54 AANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-----TIPEDLGIVCLWLGYFSSILNPIIYTIFNRT  128 (221)
Q Consensus        54 ~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~-----~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~  128 (221)
                      .....++++|++||+++|+++|++||+||+++.++..+.+....     .....++.++.||+|+|||+|||||+++|++
T Consensus       397 ~~~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~  476 (510)
T 4grv_A          397 GSGSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSAN  476 (510)
T ss_dssp             TTSTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence            33455678999999999999999999999999999887654221     1123455688999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCC
Q psy3683         129 FRAAFIRLLKCKCGQV  144 (221)
Q Consensus       129 fR~~~~~~~~~~~~~~  144 (221)
                      ||++|+++|+|+|...
T Consensus       477 FR~aFk~iL~C~C~~~  492 (510)
T 4grv_A          477 FRQVFLSTLACLCPGW  492 (510)
T ss_dssp             CCCC------------
T ss_pred             HHHHHHHHHhhcCCCC
Confidence            9999999998866543

>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*

Probab=99.77  E-value=1.1e-18  Score=155.39  Aligned_cols=80  Identities=40%  Similarity=0.744  Sum_probs=69.9

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683          58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL  137 (221)
Q Consensus        58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~  137 (221)
                      .++++|++|++++|+++|++||+||+++.++..+...   ..+..++.++.||+|+|||+||+||++ +++||+++++++
T Consensus       400 ~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~---~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il  475 (500)
T 2rh1_A          400 CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELL  475 (500)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---cccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHH
Confidence            3578999999999999999999999999999888632   346678889999999999999999996 999999999999


Q ss_pred             hccc
Q psy3683         138 KCKC  141 (221)
Q Consensus       138 ~~~~  141 (221)
                      +|++
T Consensus       476 ~~~~  479 (500)
T 2rh1_A          476 CLRR  479 (500)
T ss_dssp             TC--
T ss_pred             hhhc
Confidence            6543

>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A

Probab=99.76  E-value=3.6e-18  Score=148.71  Aligned_cols=87  Identities=26%  Similarity=0.541  Sum_probs=73.2

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHH
Q psy3683          57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRL  136 (221)
Q Consensus        57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~  136 (221)
                      ..++++|++|++++|+++|++||+||+++.++..+.+.. ......+..++.+|+++|||+||+||++++++||++++++
T Consensus       345 ~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~  423 (447)
T 4eiy_A          345 TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKI  423 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcc-cccchHHHHHHHHHHHHHhccchhhhHhccHHHHHHHHHH
Confidence            456789999999999999999999999999998875431 2245567779999999999999999999999999999999


Q ss_pred             hhcccCCC
Q psy3683         137 LKCKCGQV  144 (221)
Q Consensus       137 ~~~~~~~~  144 (221)
                      ++|++++.
T Consensus       424 ~~~~~~r~  431 (447)
T 4eiy_A          424 IRSHVLRQ  431 (447)
T ss_dssp             HHHTC---
T ss_pred             HHHHHhcc
Confidence            98765443

>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A

Probab=99.75  E-value=6.8e-18  Score=143.47  Aligned_cols=86  Identities=31%  Similarity=0.651  Sum_probs=71.8

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCc-ccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHH
Q psy3683          56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGY-CTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI  134 (221)
Q Consensus        56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~  134 (221)
                      ++.++++|+++++++++++|++||+||+++.++..+.+... ......++.+..+|+++||++||+||++++++||++++
T Consensus       238 ~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~  317 (364)
T 2ks9_A          238 EQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFK  317 (364)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             hhHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            34567899999999999999999999999999887754421 22334566788899999999999999999999999999


Q ss_pred             HHhhccc
Q psy3683         135 RLLKCKC  141 (221)
Q Consensus       135 ~~~~~~~  141 (221)
                      ++++|+.
T Consensus       318 ~~~~~~~  324 (364)
T 2ks9_A          318 HAFRCCP  324 (364)
T ss_dssp             HHHSSSC
T ss_pred             HHHhhcC
Confidence            9997643

>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*

Probab=99.74  E-value=1.1e-17  Score=147.12  Aligned_cols=88  Identities=26%  Similarity=0.538  Sum_probs=76.2

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683          56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR  135 (221)
Q Consensus        56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~  135 (221)
                      ...++++|+++++++|+++|++||+||+++.++..+.+.. ......+..++.+|+++|||+||+||++++++||+++++
T Consensus       385 ~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~  463 (488)
T 3eml_A          385 STLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRK  463 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTS-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCcc-ccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHHHHH
Confidence            3456789999999999999999999999999998886532 234566777999999999999999999999999999999


Q ss_pred             HhhcccCCC
Q psy3683         136 LLKCKCGQV  144 (221)
Q Consensus       136 ~~~~~~~~~  144 (221)
                      +++|++.+.
T Consensus       464 l~~~~~~~~  472 (488)
T 3eml_A          464 IIRSHVLRQ  472 (488)
T ss_dssp             HHHHTTSCC
T ss_pred             HHhhccccc
Confidence            998766554

>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}

Probab=99.74  E-value=9.5e-19  Score=154.01  Aligned_cols=88  Identities=18%  Similarity=0.301  Sum_probs=61.4

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCC--CcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHH
Q psy3683          57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPT--GYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFI  134 (221)
Q Consensus        57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~  134 (221)
                      +.++++|++||+++|+++|++||+||+++.++..+...  ........++.++.+|+++|||+||+||++++++||++++
T Consensus       381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~~~~  460 (484)
T 3vw7_A          381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQRYVY  460 (484)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC-----
T ss_pred             chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHHHHH
Confidence            44667999999999999999999999999999876532  1222334566689999999999999999999999999999


Q ss_pred             HHhhcccCCC
Q psy3683         135 RLLKCKCGQV  144 (221)
Q Consensus       135 ~~~~~~~~~~  144 (221)
                      ++++|.+...
T Consensus       461 ~ll~~~~~~~  470 (484)
T 3vw7_A          461 SILCCKESSD  470 (484)
T ss_dssp             ----------
T ss_pred             HHHhhccCCC
Confidence            9997765443

>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*

Probab=99.73  E-value=9.9e-18  Score=146.43  Aligned_cols=83  Identities=24%  Similarity=0.543  Sum_probs=71.8

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683          56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR  135 (221)
Q Consensus        56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~  135 (221)
                      ++.++++|++|++++|+++|++||+||+++.++..+...........++.++.+|+++||++||+||++++++||+++++
T Consensus       373 ~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~  452 (464)
T 4dkl_A          373 EKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENFKRCFRE  452 (464)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHHHHHHHH
Confidence            34567899999999999999999999999999988865444444556667889999999999999999999999999999


Q ss_pred             Hhh
Q psy3683         136 LLK  138 (221)
Q Consensus       136 ~~~  138 (221)
                      +++
T Consensus       453 lc~  455 (464)
T 4dkl_A          453 FCI  455 (464)
T ss_dssp             HHC
T ss_pred             Hhc
Confidence            853

>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*

Probab=99.72  E-value=7.6e-18  Score=150.86  Aligned_cols=85  Identities=32%  Similarity=0.503  Sum_probs=70.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683          58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL  137 (221)
Q Consensus        58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~  137 (221)
                      .++++|+++|+++|+++|++||+||+++.++..+.+...+. ......++.+|+++|||+||+||++++++||+++++++
T Consensus       413 ~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fr~~~~~~~  491 (520)
T 3v2y_A          413 SSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCD-ILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIM  491 (520)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCS-TTTSCHHHHHHHHHGGGTHHHHHHHHCHHHHHHHHTTC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence            44689999999999999999999999999998876543222 33445577889999999999999999999999999999


Q ss_pred             hcccCC
Q psy3683         138 KCKCGQ  143 (221)
Q Consensus       138 ~~~~~~  143 (221)
                      +|++..
T Consensus       492 ~~~~~~  497 (520)
T 3v2y_A          492 GRPLEV  497 (520)
T ss_dssp             CSCC--
T ss_pred             HHhccc
Confidence            765433

>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}

Probab=99.71  E-value=2.7e-17  Score=144.55  Aligned_cols=81  Identities=43%  Similarity=0.949  Sum_probs=71.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhh
Q psy3683          59 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK  138 (221)
Q Consensus        59 ~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~  138 (221)
                      ++++|+++++++|+++|++||+||+++.++..+.+.  ......++.++.+|+++|||+||+||++++++||++++++++
T Consensus       394 ~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~--~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~  471 (481)
T 3pbl_A          394 LREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQT--CHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILS  471 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc--ccCcHHHHHHHHHHHHHhhccchHHHHHcCHHHHHHHHHHHh
Confidence            468999999999999999999999999999877543  445677888999999999999999999999999999999997


Q ss_pred             ccc
Q psy3683         139 CKC  141 (221)
Q Consensus       139 ~~~  141 (221)
                      |++
T Consensus       472 c~~  474 (481)
T 3pbl_A          472 CGR  474 (481)
T ss_dssp             C--
T ss_pred             ccC
Confidence            643

>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*

Probab=99.71  E-value=2.3e-17  Score=144.34  Aligned_cols=83  Identities=28%  Similarity=0.708  Sum_probs=70.5

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683          58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL  137 (221)
Q Consensus        58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~  137 (221)
                      .++++|+++++++|+++|++||+||.++.++..+...   .....+..++.+|+++|||+||+||++++++||++++++|
T Consensus       380 ~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~---~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll  456 (467)
T 3uon_A          380 PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAP---CIPNTVWTIGYWLCYINSTINPACYALCNATFKKTFKHLL  456 (467)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCST---TSCHHHHHHHHHHHHHTTTHHHHHHHHHCHHHHHHHHHHC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc---ccchHHHHHHHHHHHHhhhhhhHHHHHcCHHHHHHHHHHH
Confidence            3568999999999999999999999999999888653   2356778899999999999999999999999999999999


Q ss_pred             hcccCC
Q psy3683         138 KCKCGQ  143 (221)
Q Consensus       138 ~~~~~~  143 (221)
                      +|+++.
T Consensus       457 ~c~~~~  462 (467)
T 3uon_A          457 MCHYKN  462 (467)
T ss_dssp             C-----
T ss_pred             hhhccC
Confidence            775543

>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...

Probab=99.70  E-value=1.2e-16  Score=134.45  Aligned_cols=83  Identities=18%  Similarity=0.482  Sum_probs=70.7

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHH
Q psy3683          56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIR  135 (221)
Q Consensus        56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~  135 (221)
                      ...++++|+++++++++++|++||+||+++.++..+...  ......+..++.+++++||++||+||++++++||+++++
T Consensus       243 ~~~~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~fR~~~~~  320 (349)
T 1u19_A          243 TTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVT  320 (349)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCC--cccchHHHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHH
Confidence            345667899999999999999999999999888776543  233456677889999999999999999999999999999


Q ss_pred             Hhhcc
Q psy3683         136 LLKCK  140 (221)
Q Consensus       136 ~~~~~  140 (221)
                      +++|.
T Consensus       321 ~~~c~  325 (349)
T 1u19_A          321 TLCCG  325 (349)
T ss_dssp             HHTSS
T ss_pred             Hhccc
Confidence            99664

>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}

Probab=99.70  E-value=5.8e-17  Score=141.22  Aligned_cols=84  Identities=38%  Similarity=0.896  Sum_probs=71.3

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHH
Q psy3683          57 SVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRL  136 (221)
Q Consensus        57 ~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~  136 (221)
                      ..++++|+++++++|+++|++||+||+++.++..+.+..   ....+..++.+|+++|||+||+||++++++||++++++
T Consensus       364 ~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~---~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~l  440 (452)
T 3rze_A          364 HMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNC---CNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRI  440 (452)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---SCTTTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhccc---ccHHHHHHHHHHHHHHhcccchhhhhccHHHHHHHHHH
Confidence            446789999999999999999999999999998876542   34566779999999999999999999999999999999


Q ss_pred             hhcccCC
Q psy3683         137 LKCKCGQ  143 (221)
Q Consensus       137 ~~~~~~~  143 (221)
                      ++|++..
T Consensus       441 l~~~~~~  447 (452)
T 3rze_A          441 LHIRSGE  447 (452)
T ss_dssp             HTC----
T ss_pred             HHhcccc
Confidence            9876543

>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}

Probab=99.69  E-value=4.5e-17  Score=135.01  Aligned_cols=83  Identities=28%  Similarity=0.535  Sum_probs=69.8

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcc-------cccchHHHHHHHHHhhccchhhHHHHhccHHHH
Q psy3683          58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC-------TIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFR  130 (221)
Q Consensus        58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~-------~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR  130 (221)
                      .++++|++|++++++++|++||+||+++.++..+......       .....+..++.+|+++|||+||+||++++++||
T Consensus       206 ~~~~~k~~~~~~~v~~~f~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR  285 (296)
T 2lnl_A          206 MGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFR  285 (296)
T ss_dssp             CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHHH
T ss_pred             hhhhhhHHHHHHHhhhheeeeehHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence            3567899999999999999999999999999887654211       112345668899999999999999999999999


Q ss_pred             HHHHHHhhcc
Q psy3683         131 AAFIRLLKCK  140 (221)
Q Consensus       131 ~~~~~~~~~~  140 (221)
                      ++++++++|+
T Consensus       286 ~~~~~ll~cr  295 (296)
T 2lnl_A          286 HGFLKILAMH  295 (296)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHhcCC
Confidence            9999999763

>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*

Probab=99.67  E-value=2.1e-16  Score=130.88  Aligned_cols=104  Identities=38%  Similarity=0.675  Sum_probs=75.2

Q ss_pred             ChhhHHHHHHHHHHhhhhhh---hhhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHH
Q psy3683          33 NPHRLFKHIKKAQRRTRQAS---TAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLW  109 (221)
Q Consensus        33 ~~~~i~~~i~~~~~~~~~~~---~~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~  109 (221)
                      .+.++.+.+++..++.....   ......++++|+++++++++++|++||+||+++.++..+...   .....+..++.+
T Consensus       196 ~y~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~---~~~~~~~~~~~~  272 (315)
T 4amj_A          196 VALRVYREAKEQIRKIDRASKRKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRD---LVPDWLFVAFNW  272 (315)
T ss_dssp             HHHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCcccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc---cchHHHHHHHHH
Confidence            34555555554433322211   122234468899999999999999999999999999887543   234567778899


Q ss_pred             HHhhccchhhHHHHhccHHHHHHHHHHhhcc
Q psy3683         110 LGYFSSILNPIIYTIFNRTFRAAFIRLLKCK  140 (221)
Q Consensus       110 l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~~  140 (221)
                      ++++||++||+||+ ++++||++++++++|.
T Consensus       273 l~~~ns~~nPiiY~-~~~~fR~~~~~~l~~~  302 (315)
T 4amj_A          273 LGYANSAMNPIIYC-RSPDFRKAFKRLLAFP  302 (315)
T ss_dssp             HHHHGGGTHHHHGG-GSHHHHHHHHHHHC--
T ss_pred             HHHHhccccHHHHc-CcHHHHHHHHHHhCCC
Confidence            99999999999999 8999999999999764

>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*

Probab=99.65  E-value=4.1e-16  Score=139.15  Aligned_cols=78  Identities=41%  Similarity=0.769  Sum_probs=67.3

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhh
Q psy3683          59 RTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLK  138 (221)
Q Consensus        59 ~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~  138 (221)
                      ++++|+++++++++++|++||+||+++.++..+...   .....+..++.+|+++||++||+||+ ++++||++++++++
T Consensus       415 ~~~~r~~~~l~~iv~~F~lcwlP~~i~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~~NPiIY~-~~~~fR~~~~~~l~  490 (514)
T 3sn6_R          415 LKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDN---LIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC  490 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc---ccchHHHHHHHHHHHHHHhhhHHhhc-CCHHHHHHHHHHhC
Confidence            467899999999999999999999999998877432   23556777899999999999999999 89999999999996


Q ss_pred             cc
Q psy3683         139 CK  140 (221)
Q Consensus       139 ~~  140 (221)
                      |+
T Consensus       491 ~~  492 (514)
T 3sn6_R          491 LR  492 (514)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*

Probab=99.64  E-value=5.8e-17  Score=143.20  Aligned_cols=86  Identities=19%  Similarity=0.358  Sum_probs=70.7

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----c---ccccchHHHHHHHHHhhccchhhHHHHhccHH
Q psy3683          56 NSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTG----Y---CTIPEDLGIVCLWLGYFSSILNPIIYTIFNRT  128 (221)
Q Consensus        56 ~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~----~---~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~  128 (221)
                      .+.++++|+++++++|+++|++||+||+++.++..+....    .   ......+..++.+|+++||++||+||++++++
T Consensus       403 ~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~  482 (502)
T 3odu_A          403 SKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAK  482 (502)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCC
T ss_pred             hhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHH
Confidence            3456689999999999999999999999999988764221    1   12234445588999999999999999999999


Q ss_pred             HHHHHHHHhhccc
Q psy3683         129 FRAAFIRLLKCKC  141 (221)
Q Consensus       129 fR~~~~~~~~~~~  141 (221)
                      ||++++++++|+.
T Consensus       483 fR~~~~~ll~~~~  495 (502)
T 3odu_A          483 FKTSAQHALTSGR  495 (502)
T ss_dssp             CCCCHHHHHSSCS
T ss_pred             HHHHHHHHhccCC
Confidence            9999999997644

>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*

Probab=99.64  E-value=6e-16  Score=135.43  Aligned_cols=79  Identities=22%  Similarity=0.416  Sum_probs=68.2

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHh
Q psy3683          58 VRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLL  137 (221)
Q Consensus        58 ~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~  137 (221)
                      .++++|++|++++++++|++||+|++++.++..+...  ......+..+..+++++||++||+||++++++||+++++++
T Consensus       253 ~~~~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~~~~~~  330 (448)
T 2z73_A          253 ANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPL--EWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTF  330 (448)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCG--GGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHHHHHHHHHC
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCc--ccCChHHHHHHHHHHHHHHhhcchHHHHhhHHHHHHHHHHH
Confidence            3457899999999999999999999999998877532  22345666788899999999999999999999999999998


Q ss_pred             h
Q psy3683         138 K  138 (221)
Q Consensus       138 ~  138 (221)
                      +
T Consensus       331 ~  331 (448)
T 2z73_A          331 P  331 (448)
T ss_dssp             G
T ss_pred             H
Confidence            5

>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}

Probab=99.02  E-value=4.9e-11  Score=69.51  Aligned_cols=37  Identities=27%  Similarity=0.448  Sum_probs=33.7

Q ss_pred             HHHHHHHHHhhccchhhHHHHhccHHHHHHHHHHhhc
Q psy3683         103 LGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKC  139 (221)
Q Consensus       103 ~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~~~~~~~  139 (221)
                      ++.++.+++++||++||+||++.+++||++++++++|
T Consensus         2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~~   38 (40)
T 2koe_A            2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFPS   38 (40)
T ss_dssp             HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhhh
Confidence            4567889999999999999999999999999998854

>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}

Probab=98.67  E-value=8.5e-10  Score=61.44  Aligned_cols=29  Identities=31%  Similarity=0.732  Sum_probs=25.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy3683          61 EQKASKVLGLVFFTFVLCWAPFFLLQILQ   89 (221)
Q Consensus        61 ~~k~~k~l~~v~~~F~lcw~Py~i~~l~~   89 (221)
                      ++|++|++++++++|++||+||+++.++.
T Consensus         1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~   29 (33)
T 2ki9_A            1 DVRLAKTLGLVLAVLLICWFPVLALMAHS   29 (33)
T ss_dssp             CCSSSSHHHHHHHHHTTTSSHHHHHHTTT
T ss_pred             CchhhhhHHHHHHHHHHHHhHHHHHHHHH
Confidence            35788999999999999999999987764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	221
d1u19a_	348	f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId:	9e-21

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]} Length = 348

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 86.6 bits (213), Expect = 9e-21
 Identities = 21/127 (16%), Positives = 51/127 (40%), Gaps = 2/127 (1%)

Query: 38  FKHIKKAQRRTRQASTAANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYC 97
            + +   +    Q   +A + + E++ ++++ ++   F++CW P+  +            
Sbjct: 224 GQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--S 281

Query: 98  TIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAFIRLLKCKCGQVTKPIRYRSVNDRA 157
                   +  +    S++ NP+IY + N+ FR   +  L C    +       +V+   
Sbjct: 282 DFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTE 341

Query: 158 TASSGPA 164
           T+   PA
Sbjct: 342 TSQVAPA 348

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	221
d1u19a_	348	Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}	99.74

>d1u19a_ f.13.1.2 (A:) Rhodopsin {Cow (Bos taurus) [TaxId: 9913]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Rhodopsin-like
domain: Rhodopsin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.74  E-value=8.6e-18  Score=139.83  Aligned_cols=86  Identities=19%  Similarity=0.468  Sum_probs=73.3

Q ss_pred             hhhhhhhhhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCcccccchHHHHHHHHHhhccchhhHHHHhccHHHHHHH
Q psy3683          54 AANSVRTEQKASKVLGLVFFTFVLCWAPFFLLQILQAICPTGYCTIPEDLGIVCLWLGYFSSILNPIIYTIFNRTFRAAF  133 (221)
Q Consensus        54 ~~~~~~~~~k~~k~l~~v~~~F~lcw~Py~i~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~fR~~~  133 (221)
                      .....++++|+++++++++++|++||+||.++.++......  ......+..++.+++++||++||+||++++++||+++
T Consensus       240 ~~~~~~~~~~~~~~~~~i~~~f~~~~~P~~i~~~~~~~~~~--~~~~~~~~~~~~~l~~~ns~iNPiIY~~~~~~fR~~~  317 (348)
T d1u19a_         240 SATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQG--SDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCM  317 (348)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--SCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHHHHHHH
T ss_pred             hhhhHHHHhhHhheEEEeehHHHHHhhHHHhhhheeeccCC--ccccHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence            34456678999999999999999999999999888776544  3345667778999999999999999999999999999


Q ss_pred             HHHhhccc
Q psy3683         134 IRLLKCKC  141 (221)
Q Consensus       134 ~~~~~~~~  141 (221)
                      +++++|++
T Consensus       318 ~~~l~c~~  325 (348)
T d1u19a_         318 VTTLCCGK  325 (348)
T ss_dssp             HHHHTSSC
T ss_pred             HHHhCCCC
Confidence            99997543