Psyllid ID: psy3715


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
ccHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHcccccccccccccEEEccEEEEEEHHHHHccccccccccccccccccccccccEEEEcccHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHcccEEEEEc
cHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHcccHHHHHHHHHHHccEEEEEEEEEccHHHHHHHccccHHHEcccccEEEEEccEEEEccccEEcccccccccccccccccEEEccHHccEEEEcccHHHHHHHHHcccccHHHHHHHcHHHcccccHHHHHHHHccccEEEEEc
MICTVLHLLYIVIHKIMaepkertflmikpdgvqrglVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCrmvssvpayeiSGKLLVGITYSTVLGHlnletsecplfhidyelfpaERQFYCLNNYLTTCKLLtemgipseELLKQHYsdlatkpffpglvkymssgpvvpmvr
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYmssgpvvpmvr
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
*ICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYM**********
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQ********TTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
SSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMVR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query179 2.2.26 [Sep-21-2011]
P08879153 Nucleoside diphosphate ki no N/A 0.251 0.294 0.777 2e-14
Q6XI71150 Nucleoside diphosphate ki N/A N/A 0.229 0.273 0.804 1e-13
P70011154 Nucleoside diphosphate ki N/A N/A 0.251 0.292 0.755 7e-13
P70010154 Nucleoside diphosphate ki N/A N/A 0.251 0.292 0.755 1e-12
O57535153 Nucleoside diphosphate ki yes N/A 0.251 0.294 0.777 4e-12
Q90380153 Nucleoside diphosphate ki N/A N/A 0.251 0.294 0.755 1e-11
Q50KA8152 Nucleoside diphosphate ki yes N/A 0.229 0.269 0.756 1e-11
Q3T0Q4152 Nucleoside diphosphate ki yes N/A 0.223 0.263 0.8 2e-11
Q5RFH3152 Nucleoside diphosphate ki yes N/A 0.223 0.263 0.8 2e-11
Q01768152 Nucleoside diphosphate ki yes N/A 0.223 0.263 0.8 2e-11
>sp|P08879|NDKA_DROME Nucleoside diphosphate kinase OS=Drosophila melanogaster GN=awd PE=1 SV=3 Back     alignment and function desciption
 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 39/45 (86%)

Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
          MA  KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S
Sbjct: 1  MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWAS 45




Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 7EC: .EC: 4EC: .EC: 6
>sp|Q6XI71|NDKA_DROYA Nucleoside diphosphate kinase (Fragment) OS=Drosophila yakuba GN=awd PE=2 SV=1 Back     alignment and function description
>sp|P70011|NDKA2_XENLA Nucleoside diphosphate kinase A2 OS=Xenopus laevis PE=2 SV=1 Back     alignment and function description
>sp|P70010|NDKA1_XENLA Nucleoside diphosphate kinase A1 OS=Xenopus laevis PE=2 SV=1 Back     alignment and function description
>sp|O57535|NDK_CHICK Nucleoside diphosphate kinase OS=Gallus gallus PE=2 SV=1 Back     alignment and function description
>sp|Q90380|NDK_COLLI Nucleoside diphosphate kinase OS=Columba livia PE=2 SV=2 Back     alignment and function description
>sp|Q50KA8|NDKB_CANFA Nucleoside diphosphate kinase B OS=Canis familiaris GN=NME2 PE=2 SV=1 Back     alignment and function description
>sp|Q3T0Q4|NDKB_BOVIN Nucleoside diphosphate kinase B OS=Bos taurus GN=NME2 PE=1 SV=1 Back     alignment and function description
>sp|Q5RFH3|NDKB_PONAB Nucleoside diphosphate kinase B OS=Pongo abelii GN=NME2 PE=2 SV=1 Back     alignment and function description
>sp|Q01768|NDKB_MOUSE Nucleoside diphosphate kinase B OS=Mus musculus GN=Nme2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query179
170036973195 nucleoside diphosphate kinase [Culex qui 0.664 0.610 0.423 1e-23
296476553224 TPA: NME1-NME2 protein-like [Bos taurus] 0.860 0.687 0.403 3e-23
426237703267 PREDICTED: nucleoside diphosphate kinase 0.877 0.588 0.409 3e-21
440910475268 Nucleoside diphosphate kinase B, partial 0.877 0.585 0.409 3e-21
344285831267 PREDICTED: nucleoside diphosphate kinase 0.877 0.588 0.393 3e-20
449283075269 Nucleoside diphosphate kinase [Columba l 0.865 0.576 0.373 5e-20
395531936267 PREDICTED: nucleoside diphosphate kinase 0.877 0.588 0.382 9e-20
301781232270 PREDICTED: LOW QUALITY PROTEIN: nucleosi 0.877 0.581 0.387 1e-19
402899660267 PREDICTED: nucleoside diphosphate kinase 0.877 0.588 0.393 2e-19
441641306 311 PREDICTED: nucleoside diphosphate kinase 0.877 0.504 0.393 2e-19
>gi|170036973|ref|XP_001846335.1| nucleoside diphosphate kinase [Culex quinquefasciatus] gi|167879963|gb|EDS43346.1| nucleoside diphosphate kinase [Culex quinquefasciatus] Back     alignment and taxonomy information
 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/163 (42%), Positives = 87/163 (53%), Gaps = 44/163 (26%)

Query: 17  MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVSFLEKKSACCRM 76
           MA  KERTF+M+KPDGVQRGLVG IIKRFE KGFKLVAMKF+W +        K     M
Sbjct: 1   MAANKERTFIMVKPDGVQRGLVGKIIKRFEAKGFKLVAMKFMWAA-------NKGRTFNM 53

Query: 77  VSSVPAYE-ISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQFYCLNNYLTTC 135
           V +      + GK+L                                ++F      L   
Sbjct: 54  VKTDGVQRGLVGKML--------------------------------KRFETKGFQLVGL 81

Query: 136 KLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
           K++       +ELL++HY+DL+ +PFFPGLV YM+SGPVVPMV
Sbjct: 82  KVM----WAEKELLEKHYADLSARPFFPGLVNYMNSGPVVPMV 120




Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|296476553|tpg|DAA18668.1| TPA: NME1-NME2 protein-like [Bos taurus] Back     alignment and taxonomy information
>gi|426237703|ref|XP_004012797.1| PREDICTED: nucleoside diphosphate kinase A 1 isoform 1 [Ovis aries] Back     alignment and taxonomy information
>gi|440910475|gb|ELR60269.1| Nucleoside diphosphate kinase B, partial [Bos grunniens mutus] Back     alignment and taxonomy information
>gi|344285831|ref|XP_003414663.1| PREDICTED: nucleoside diphosphate kinase B-like isoform 2 [Loxodonta africana] Back     alignment and taxonomy information
>gi|449283075|gb|EMC89778.1| Nucleoside diphosphate kinase [Columba livia] Back     alignment and taxonomy information
>gi|395531936|ref|XP_003768029.1| PREDICTED: nucleoside diphosphate kinase B [Sarcophilus harrisii] Back     alignment and taxonomy information
>gi|301781232|ref|XP_002926027.1| PREDICTED: LOW QUALITY PROTEIN: nucleoside diphosphate kinase B-like [Ailuropoda melanoleuca] Back     alignment and taxonomy information
>gi|402899660|ref|XP_003912807.1| PREDICTED: nucleoside diphosphate kinase B-like isoform 4 [Papio anubis] gi|402899662|ref|XP_003912808.1| PREDICTED: nucleoside diphosphate kinase B-like isoform 5 [Papio anubis] Back     alignment and taxonomy information
>gi|441641306|ref|XP_003272317.2| PREDICTED: nucleoside diphosphate kinase 2, chloroplastic-like isoform 3 [Nomascus leucogenys] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query179
UNIPROTKB|O57535153 O57535 "Nucleoside diphosphate 0.251 0.294 0.777 5.1e-26
UNIPROTKB|F1MPL4114 NME2 "Nucleoside diphosphate k 0.223 0.350 0.8 5.1e-26
UNIPROTKB|Q3T0Q4152 NME2 "Nucleoside diphosphate k 0.223 0.263 0.8 5.1e-26
UNIPROTKB|Q2EN76152 NME2 "Nucleoside diphosphate k 0.223 0.263 0.75 1.7e-25
UNIPROTKB|P22392152 NME2 "Nucleoside diphosphate k 0.223 0.263 0.8 3.5e-25
MGI|MGI:97356152 Nme2 "NME/NM23 nucleoside diph 0.223 0.263 0.8 3.5e-25
RGD|619877152 Nme2 "NME/NM23 nucleoside diph 0.223 0.263 0.8 3.5e-25
ZFIN|ZDB-GENE-030131-7656170 nme2a "non-metastatic cells 2a 0.234 0.247 0.761 4.4e-25
UNIPROTKB|J3KPD9197 NME2 "Nucleoside diphosphate k 0.279 0.253 0.686 5.6e-25
UNIPROTKB|Q50KA8152 NME2 "Nucleoside diphosphate k 0.229 0.269 0.756 7.1e-25
UNIPROTKB|O57535 O57535 "Nucleoside diphosphate kinase" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
 Score = 169 (64.5 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
 Identities = 35/45 (77%), Positives = 37/45 (82%)

Query:    17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
             MA   ERTF+ IKPDGVQRGLVG IIKRFE KGF+LVAMKFV  S
Sbjct:     1 MAANCERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFVHAS 45


GO:0006183 "GTP biosynthetic process" evidence=IEA
GO:0006228 "UTP biosynthetic process" evidence=IEA
GO:0006241 "CTP biosynthetic process" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA
GO:0046872 "metal ion binding" evidence=IEA
GO:0004550 "nucleoside diphosphate kinase activity" evidence=IEA
GO:0005886 "plasma membrane" evidence=IEA
GO:0001726 "ruffle" evidence=ISS
GO:0030027 "lamellipodium" evidence=ISS
GO:0043066 "negative regulation of apoptotic process" evidence=ISS
GO:0005739 "mitochondrion" evidence=ISS
GO:0045618 "positive regulation of keratinocyte differentiation" evidence=ISS
GO:0045682 "regulation of epidermis development" evidence=ISS
GO:0050679 "positive regulation of epithelial cell proliferation" evidence=ISS
UNIPROTKB|F1MPL4 NME2 "Nucleoside diphosphate kinase B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T0Q4 NME2 "Nucleoside diphosphate kinase B" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q2EN76 NME2 "Nucleoside diphosphate kinase B" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|P22392 NME2 "Nucleoside diphosphate kinase B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:97356 Nme2 "NME/NM23 nucleoside diphosphate kinase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|619877 Nme2 "NME/NM23 nucleoside diphosphate kinase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-7656 nme2a "non-metastatic cells 2a, protein (NM23B) expressed in" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J3KPD9 NME2 "Nucleoside diphosphate kinase B" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q50KA8 NME2 "Nucleoside diphosphate kinase B" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.4LOW CONFIDENCE prediction!
4th Layer2.7.4.6LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
PRK00668134 PRK00668, ndk, mulitfunctional nucleoside diphosph 4e-23
cd04413130 cd04413, NDPk_I, Nucleoside diphosphate kinase Gro 7e-23
pfam00334135 pfam00334, NDK, Nucleoside diphosphate kinase 1e-21
COG0105135 COG0105, Ndk, Nucleoside diphosphate kinase [Nucle 5e-21
PTZ00093149 PTZ00093, PTZ00093, nucleoside diphosphate kinase, 4e-20
smart00562135 smart00562, NDK, Enzymes that catalyze nonsubstrat 1e-18
cd04413130 cd04413, NDPk_I, Nucleoside diphosphate kinase Gro 2e-16
PLN02619238 PLN02619, PLN02619, nucleoside-diphosphate kinase 2e-15
pfam00334135 pfam00334, NDK, Nucleoside diphosphate kinase 9e-15
PTZ00093149 PTZ00093, PTZ00093, nucleoside diphosphate kinase, 1e-14
PRK14544183 PRK14544, PRK14544, nucleoside diphosphate kinase; 2e-14
cd00595133 cd00595, NDPk, Nucleoside diphosphate kinases (NDP 1e-12
PRK00668134 PRK00668, ndk, mulitfunctional nucleoside diphosph 2e-12
PRK14540134 PRK14540, PRK14540, nucleoside diphosphate kinase; 4e-12
smart00562135 smart00562, NDK, Enzymes that catalyze nonsubstrat 9e-12
COG0105135 COG0105, Ndk, Nucleoside diphosphate kinase [Nucle 2e-10
PRK14542137 PRK14542, PRK14542, nucleoside diphosphate kinase; 5e-10
PRK14545139 PRK14545, PRK14545, nucleoside diphosphate kinase; 6e-10
PRK14543169 PRK14543, PRK14543, nucleoside diphosphate kinase; 7e-10
PLN02619238 PLN02619, PLN02619, nucleoside-diphosphate kinase 2e-09
cd00595133 cd00595, NDPk, Nucleoside diphosphate kinases (NDP 3e-09
PRK14541140 PRK14541, PRK14541, nucleoside diphosphate kinase; 4e-06
cd04418132 cd04418, NDPk5, Nucleoside diphosphate kinase homo 5e-05
PLN02931177 PLN02931, PLN02931, nucleoside diphosphate kinase 6e-05
cd04412134 cd04412, NDPk7B, Nucleoside diphosphate kinase 7 d 2e-04
cd04415131 cd04415, NDPk7A, Nucleoside diphosphate kinase 7 d 6e-04
cd04416132 cd04416, NDPk_TX, NDP kinase domain of thioredoxin 0.002
PRK14541140 PRK14541, PRK14541, nucleoside diphosphate kinase; 0.004
>gnl|CDD|179085 PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated Back     alignment and domain information
 Score = 88.6 bits (221), Expect = 4e-23
 Identities = 26/40 (65%), Positives = 32/40 (80%)

Query: 22 ERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61
          ERTF +IKPD VQRGL+G II RFE KG K+VA+K + +S
Sbjct: 2  ERTFSIIKPDAVQRGLIGEIISRFEKKGLKIVALKMMQLS 41


Length = 134

>gnl|CDD|239876 cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate Back     alignment and domain information
>gnl|CDD|201162 pfam00334, NDK, Nucleoside diphosphate kinase Back     alignment and domain information
>gnl|CDD|223183 COG0105, Ndk, Nucleoside diphosphate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|173387 PTZ00093, PTZ00093, nucleoside diphosphate kinase, cytosolic; Provisional Back     alignment and domain information
>gnl|CDD|197791 smart00562, NDK, Enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates Back     alignment and domain information
>gnl|CDD|239876 cd04413, NDPk_I, Nucleoside diphosphate kinase Group I (NDPk_I)-like: NDP kinase domains are present in a large family of structurally and functionally conserved proteins from bacteria to humans that generally catalyze the transfer of gamma-phosphates of a nucleoside triphosphate (NTP) donor onto a nucleoside diphosphate (NDP) acceptor through a phosphohistidine intermediate Back     alignment and domain information
>gnl|CDD|178228 PLN02619, PLN02619, nucleoside-diphosphate kinase Back     alignment and domain information
>gnl|CDD|201162 pfam00334, NDK, Nucleoside diphosphate kinase Back     alignment and domain information
>gnl|CDD|173387 PTZ00093, PTZ00093, nucleoside diphosphate kinase, cytosolic; Provisional Back     alignment and domain information
>gnl|CDD|173010 PRK14544, PRK14544, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|238335 cd00595, NDPk, Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation Back     alignment and domain information
>gnl|CDD|179085 PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated Back     alignment and domain information
>gnl|CDD|184733 PRK14540, PRK14540, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|197791 smart00562, NDK, Enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates Back     alignment and domain information
>gnl|CDD|223183 COG0105, Ndk, Nucleoside diphosphate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|173008 PRK14542, PRK14542, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|184734 PRK14545, PRK14545, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|237749 PRK14543, PRK14543, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|178228 PLN02619, PLN02619, nucleoside-diphosphate kinase Back     alignment and domain information
>gnl|CDD|238335 cd00595, NDPk, Nucleoside diphosphate kinases (NDP kinases, NDPks): NDP kinases, responsible for the synthesis of nucleoside triphosphates (NTPs), are involved in numerous regulatory processes associated with proliferation, development, and differentiation Back     alignment and domain information
>gnl|CDD|173007 PRK14541, PRK14541, nucleoside diphosphate kinase; Provisional Back     alignment and domain information
>gnl|CDD|239880 cd04418, NDPk5, Nucleoside diphosphate kinase homolog 5 (NDP kinase homolog 5, NDPk5, NM23-H5; Inhibitor of p53-induced apoptosis-beta, IPIA-beta): In human, mRNA for NDPk5 is almost exclusively found in testis, especially in the flagella of spermatids and spermatozoa, in association with axoneme microtubules, and may play a role in spermatogenesis by increasing the ability of late-stage spermatids to eliminate reactive oxygen species Back     alignment and domain information
>gnl|CDD|215503 PLN02931, PLN02931, nucleoside diphosphate kinase family protein Back     alignment and domain information
>gnl|CDD|239875 cd04412, NDPk7B, Nucleoside diphosphate kinase 7 domain B (NDPk7B): The nm23-H7 class of nucleoside diphosphate kinase (NDPk7) consists of an N-terminal DM10 domain and two functional catalytic NDPk modules, NDPk7A and NDPk7B Back     alignment and domain information
>gnl|CDD|239878 cd04415, NDPk7A, Nucleoside diphosphate kinase 7 domain A (NDPk7A): The nm23-H7 class of nucleoside diphosphate kinase (NDPk7) consists of an N-terminal DM10 domain and two functional catalytic NDPk modules, NDPk7A and NDPk7B Back     alignment and domain information
>gnl|CDD|239879 cd04416, NDPk_TX, NDP kinase domain of thioredoxin domain-containing proteins (TXNDC3 and TXNDC6): Txl-2 (TXNDC6) and Sptrx-2 (TXNDC3) are fusion proteins of Group II N-terminal thioredoxin domains followed by one or three NDP kinase domains, respectively Back     alignment and domain information
>gnl|CDD|173007 PRK14541, PRK14541, nucleoside diphosphate kinase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
1nsq_A153 Mechanism Of Phosphate Transfer By Nucleoside Dipho 2e-15
1nsq_A153 Mechanism Of Phosphate Transfer By Nucleoside Dipho 2e-10
1ndl_A153 The Awd Nucleotide Diphosphate Kinase From Drosophi 2e-15
1ndl_A153 The Awd Nucleotide Diphosphate Kinase From Drosophi 2e-10
3r9l_A155 Crystal Structure Of Nucleoside Diphosphate Kinase 9e-13
3r9l_A155 Crystal Structure Of Nucleoside Diphosphate Kinase 3e-06
3bbc_A151 Crystal Structure Of R88a Mutant Of The Nm23-H2 Tra 2e-12
3bbc_A151 Crystal Structure Of R88a Mutant Of The Nm23-H2 Tra 8e-10
1nsk_R152 The Crystal Structure Of A Human Nucleoside Diphosp 2e-12
1nsk_R152 The Crystal Structure Of A Human Nucleoside Diphosp 8e-10
1nue_A151 X-ray Structure Of Nm23 Human Nucleoside Diphosphat 2e-12
1nue_A151 X-ray Structure Of Nm23 Human Nucleoside Diphosphat 8e-10
1bhn_A152 Nucleoside Diphosphate Kinase Isoform A From Bovine 2e-12
1bhn_A152 Nucleoside Diphosphate Kinase Isoform A From Bovine 9e-09
1be4_A151 Nucleoside Diphosphate Kinase Isoform B From Bovine 4e-12
1be4_A151 Nucleoside Diphosphate Kinase Isoform B From Bovine 1e-08
1zs6_A169 Structure Of Human Nucleoside-diphosphate Kinase 3 5e-12
1zs6_A169 Structure Of Human Nucleoside-diphosphate Kinase 3 2e-07
1jxv_A152 Crystal Structure Of Human Nucleoside Diphosphate K 1e-11
1jxv_A152 Crystal Structure Of Human Nucleoside Diphosphate K 9e-09
3l7u_A172 Crystal Structure Of Human Nm23-H1 Length = 172 1e-11
3l7u_A172 Crystal Structure Of Human Nm23-H1 Length = 172 1e-08
2hve_A152 S120g Mutant Of Human Nucleoside Diphosphate Kinase 1e-11
2hve_A152 S120g Mutant Of Human Nucleoside Diphosphate Kinase 9e-09
1ucn_A152 X-Ray Structure Of Human Nucleoside Diphosphate Kin 1e-11
1ucn_A152 X-Ray Structure Of Human Nucleoside Diphosphate Kin 2e-08
4fkx_A161 Crystal Structure Of Nucleoside Diphosphate Kinase 4e-11
4fkx_A161 Crystal Structure Of Nucleoside Diphosphate Kinase 1e-08
4f36_A157 Crystal Structure Of Nucleoside Diphosphate Kinase 5e-11
4f36_A157 Crystal Structure Of Nucleoside Diphosphate Kinase 1e-08
2zua_A174 Crystal Structure Of Nucleoside Diphosphate Kinase 5e-11
2zua_A174 Crystal Structure Of Nucleoside Diphosphate Kinase 7e-05
1xiq_A157 Plasmodium Falciparum Nucleoside Diphosphate Kinase 7e-11
1xiq_A157 Plasmodium Falciparum Nucleoside Diphosphate Kinase 2e-07
1nb2_A150 Crystal Structure Of Nucleoside Diphosphate Kinase 8e-11
1wkj_A137 Crystal Structure Of Nucleoside Diphosphate Kinase 2e-10
1wkj_A137 Crystal Structure Of Nucleoside Diphosphate Kinase 6e-07
3ngr_A151 Crystal Structure Of Leishmania Nucleoside Diphosph 2e-10
3ngr_A151 Crystal Structure Of Leishmania Nucleoside Diphosph 4e-07
3js9_A156 Crystal Structure Of Nucleoside Diphosphate Kinase 3e-10
2az3_A164 Structure Of A Halophilic Nucleoside Diphosphate Ki 3e-10
2az3_A164 Structure Of A Halophilic Nucleoside Diphosphate Ki 3e-05
2az1_A181 Structure Of A Halophilic Nucleoside Diphosphate Ki 3e-10
2az1_A181 Structure Of A Halophilic Nucleoside Diphosphate Ki 3e-05
3b54_A161 Saccharomyces Cerevisiae Nucleoside Diphosphate Kin 4e-10
3b54_A161 Saccharomyces Cerevisiae Nucleoside Diphosphate Kin 1e-04
1pku_A150 Crystal Structure Of Nucleoside Diphosphate Kinase 6e-10
1pku_A150 Crystal Structure Of Nucleoside Diphosphate Kinase 3e-07
1s57_A153 Crystal Structure Of Nucleoside Diphosphate Kinase 1e-09
1s57_A153 Crystal Structure Of Nucleoside Diphosphate Kinase 2e-05
1u8w_A149 Crystal Structure Of Arabidopsis Thaliana Nucleosid 2e-09
1u8w_A149 Crystal Structure Of Arabidopsis Thaliana Nucleosid 1e-04
1mn7_A155 Ndp Kinase Mutant (H122g;n119s;f64w) In Complex Wit 2e-09
1mn7_A155 Ndp Kinase Mutant (H122g;n119s;f64w) In Complex Wit 9e-05
2cwk_A160 Crystal Structure Of Nucleotide Diphosphate Kinase 2e-09
3prv_A157 Nucleoside Diphosphate Kinase B From Trypanosoma Cr 2e-09
3prv_A157 Nucleoside Diphosphate Kinase B From Trypanosoma Cr 7e-07
1w7w_A182 Structure And Mutational Analysis Of A Plant Mitoch 3e-09
1w7w_A182 Structure And Mutational Analysis Of A Plant Mitoch 2e-06
1lwx_A155 Azt Diphosphate Binding To Nucleoside Diphosphate K 3e-09
1lwx_A155 Azt Diphosphate Binding To Nucleoside Diphosphate K 3e-05
1hlw_A155 Structure Of The H122a Mutant Of The Nucleoside Dip 4e-09
1hlw_A155 Structure Of The H122a Mutant Of The Nucleoside Dip 3e-05
1pae_X155 Nucleoside Diphosphate Kinase Length = 155 4e-09
1pae_X155 Nucleoside Diphosphate Kinase Length = 155 1e-04
1leo_A150 P100s Nucleoside Diphosphate Kinase Length = 150 4e-09
1leo_A150 P100s Nucleoside Diphosphate Kinase Length = 150 2e-05
1ndp_A155 Adenosine 5'-Diphosphate Binding And The Active Sit 4e-09
1ndp_A155 Adenosine 5'-Diphosphate Binding And The Active Sit 3e-05
1nsp_A155 Mechanism Of Phosphate Transfer By Nucleoside Dipho 4e-09
1nsp_A155 Mechanism Of Phosphate Transfer By Nucleoside Dipho 3e-05
1npk_A154 Refined X-Ray Structure Of Dictyostelium Nucleoside 4e-09
1npk_A154 Refined X-Ray Structure Of Dictyostelium Nucleoside 3e-05
1b4s_A155 Structure Of Nucleoside Diphosphate Kinase H122g Mu 4e-09
1b4s_A155 Structure Of Nucleoside Diphosphate Kinase H122g Mu 3e-05
1ncl_A150 Thermal Stability Of Hexameric And Tetrameric Nucle 4e-09
1ncl_A150 Thermal Stability Of Hexameric And Tetrameric Nucle 2e-05
1ndk_A155 X-Ray Structure Of Nucleoside Diphosphate Kinase Le 4e-09
1ndk_A155 X-Ray Structure Of Nucleoside Diphosphate Kinase Le 3e-05
2vu5_A148 Crystal Structure Of Pndk From Bacillus Anthracis L 5e-09
1ehw_A162 Human Nucleoside Diphosphate Kinase 4 Length = 162 7e-09
1ehw_A162 Human Nucleoside Diphosphate Kinase 4 Length = 162 1e-07
1hhq_A155 Role Of Active Site Resiude Lys16 In Nucleoside Dip 1e-08
1hhq_A155 Role Of Active Site Resiude Lys16 In Nucleoside Dip 3e-05
3q83_A157 Crystal Structure Of Staphylococcus Aureus Nucleosi 3e-08
2nck_R144 Crystal Structure Of Myxococcus Xanthus Nucleoside 5e-07
1xqi_A195 Crystal Structure Analysis Of An Ndp Kinase From Py 2e-06
3mpd_A151 Crystal Structure Of Nucleoside Diphosphate Kinase 2e-06
1k44_A136 Mycobacterium Tuberculosis Nucleoside Diphosphate K 2e-06
1k44_A136 Mycobacterium Tuberculosis Nucleoside Diphosphate K 7e-04
4di6_A190 Crystal Structure Of Nucleoside-Diphosphate Kinase 3e-06
3pj9_A140 Crystal Structure Of A Nucleoside Diphosphate Kinas 5e-06
2b8p_A157 Crystal Structure Of Acanthamoeba Polyphaga Mimivir 9e-06
3ejm_A146 Crystal Structure Of The Mimivirus Ndk +kpn Mutant 9e-06
3em1_A146 Crystal Structure Of The Mimivirus Ndk +kpn-N62l Do 9e-06
3ddi_A146 Crystal Structure Of The Mimivirus Ndk +kpn-N62l-R1 1e-05
3emt_A146 Crystal Structure Of The Mimivirus Ndk +kpn-R107g D 1e-05
2b8q_A142 X-Ray Structure Of Acanthamoeba Ployphaga Mimivirus 1e-05
3fbf_A142 Crystal Structure Of The Mimivirus Ndk N62l Mutant 1e-05
2hur_A142 Escherichia Coli Nucleoside Diphosphate Kinase Leng 1e-05
3fbe_A142 Crystal Structure Of The Mimivirus Ndk N62l-R107g D 1e-05
3evw_A142 Crystal Structure Of The Mimivirus Ndk R107g Mutant 1e-05
3vgu_A141 E134a Mutant Nucleoside Diphosphate Kinase Derived 5e-05
3vgs_A141 Wild-Type Nucleoside Diphosphate Kinase Derived Fro 5e-05
4dut_A145 The Structure Of Nucleoside Diphosphate Kinase (Ndk 7e-05
3ztq_A142 Hexagonal Crystal Form P61 Of The Aquifex Aeolicus 4e-04
>pdb|1NSQ|A Chain A, Mechanism Of Phosphate Transfer By Nucleoside Diphosphate Kinase: X- Ray Structures Of A Phospho-Histidine Intermediate Of The Enzymes From Drosophila And Dictyostelium Length = 153 Back     alignment and structure

Iteration: 1

Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 35/45 (77%), Positives = 39/45 (86%) Query: 17 MAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS 61 MA KERTF+M+KPDGVQRGLVG II+RFE KGFKLVA+KF W S Sbjct: 1 MAANKERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWAS 45
>pdb|1NSQ|A Chain A, Mechanism Of Phosphate Transfer By Nucleoside Diphosphate Kinase: X- Ray Structures Of A Phospho-Histidine Intermediate Of The Enzymes From Drosophila And Dictyostelium Length = 153 Back     alignment and structure
>pdb|1NDL|A Chain A, The Awd Nucleotide Diphosphate Kinase From Drosophila Length = 153 Back     alignment and structure
>pdb|1NDL|A Chain A, The Awd Nucleotide Diphosphate Kinase From Drosophila Length = 153 Back     alignment and structure
>pdb|3R9L|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site Length = 155 Back     alignment and structure
>pdb|3R9L|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site Length = 155 Back     alignment and structure
>pdb|3BBC|A Chain A, Crystal Structure Of R88a Mutant Of The Nm23-H2 Transcription Factor Length = 151 Back     alignment and structure
>pdb|3BBC|A Chain A, Crystal Structure Of R88a Mutant Of The Nm23-H2 Transcription Factor Length = 151 Back     alignment and structure
>pdb|1NSK|R Chain R, The Crystal Structure Of A Human Nucleoside Diphosphate Kinase, Nm23-H2 Length = 152 Back     alignment and structure
>pdb|1NSK|R Chain R, The Crystal Structure Of A Human Nucleoside Diphosphate Kinase, Nm23-H2 Length = 152 Back     alignment and structure
>pdb|1NUE|A Chain A, X-ray Structure Of Nm23 Human Nucleoside Diphosphate Kinase B Complexed With Gdp At 2 Angstroms Resolution Length = 151 Back     alignment and structure
>pdb|1NUE|A Chain A, X-ray Structure Of Nm23 Human Nucleoside Diphosphate Kinase B Complexed With Gdp At 2 Angstroms Resolution Length = 151 Back     alignment and structure
>pdb|1BHN|A Chain A, Nucleoside Diphosphate Kinase Isoform A From Bovine Retina Length = 152 Back     alignment and structure
>pdb|1BHN|A Chain A, Nucleoside Diphosphate Kinase Isoform A From Bovine Retina Length = 152 Back     alignment and structure
>pdb|1BE4|A Chain A, Nucleoside Diphosphate Kinase Isoform B From Bovine Retina Length = 151 Back     alignment and structure
>pdb|1BE4|A Chain A, Nucleoside Diphosphate Kinase Isoform B From Bovine Retina Length = 151 Back     alignment and structure
>pdb|1ZS6|A Chain A, Structure Of Human Nucleoside-diphosphate Kinase 3 Length = 169 Back     alignment and structure
>pdb|1ZS6|A Chain A, Structure Of Human Nucleoside-diphosphate Kinase 3 Length = 169 Back     alignment and structure
>pdb|1JXV|A Chain A, Crystal Structure Of Human Nucleoside Diphosphate Kinase A Length = 152 Back     alignment and structure
>pdb|1JXV|A Chain A, Crystal Structure Of Human Nucleoside Diphosphate Kinase A Length = 152 Back     alignment and structure
>pdb|3L7U|A Chain A, Crystal Structure Of Human Nm23-H1 Length = 172 Back     alignment and structure
>pdb|3L7U|A Chain A, Crystal Structure Of Human Nm23-H1 Length = 172 Back     alignment and structure
>pdb|2HVE|A Chain A, S120g Mutant Of Human Nucleoside Diphosphate Kinase A Complexed With Adp Length = 152 Back     alignment and structure
>pdb|2HVE|A Chain A, S120g Mutant Of Human Nucleoside Diphosphate Kinase A Complexed With Adp Length = 152 Back     alignment and structure
>pdb|1UCN|A Chain A, X-Ray Structure Of Human Nucleoside Diphosphate Kinase A Complexed With Adp At 2 A Resolution Length = 152 Back     alignment and structure
>pdb|1UCN|A Chain A, X-Ray Structure Of Human Nucleoside Diphosphate Kinase A Complexed With Adp At 2 A Resolution Length = 152 Back     alignment and structure
>pdb|4FKX|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase B From Trypanosoma Brucei Bound To Cdp Length = 161 Back     alignment and structure
>pdb|4FKX|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase B From Trypanosoma Brucei Bound To Cdp Length = 161 Back     alignment and structure
>pdb|4F36|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase B From Trypanosoma Brucei, Apo Form Length = 157 Back     alignment and structure
>pdb|4F36|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase B From Trypanosoma Brucei, Apo Form Length = 157 Back     alignment and structure
>pdb|2ZUA|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Haloarcula Quadrata Length = 174 Back     alignment and structure
>pdb|2ZUA|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Haloarcula Quadrata Length = 174 Back     alignment and structure
>pdb|1XIQ|A Chain A, Plasmodium Falciparum Nucleoside Diphosphate Kinase B Length = 157 Back     alignment and structure
>pdb|1XIQ|A Chain A, Plasmodium Falciparum Nucleoside Diphosphate Kinase B Length = 157 Back     alignment and structure
>pdb|1NB2|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Bacillus Halodenitrificans Length = 150 Back     alignment and structure
>pdb|1WKJ|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Thermus Thermophilus Hb8 Length = 137 Back     alignment and structure
>pdb|1WKJ|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Thermus Thermophilus Hb8 Length = 137 Back     alignment and structure
>pdb|3NGR|A Chain A, Crystal Structure Of Leishmania Nucleoside Diphosphate Kinase B With Unordered Nucleotide-Binding Loop. Length = 151 Back     alignment and structure
>pdb|3NGR|A Chain A, Crystal Structure Of Leishmania Nucleoside Diphosphate Kinase B With Unordered Nucleotide-Binding Loop. Length = 151 Back     alignment and structure
>pdb|3JS9|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase Family Protein From Babesia Bovis Length = 156 Back     alignment and structure
>pdb|2AZ3|A Chain A, Structure Of A Halophilic Nucleoside Diphosphate Kinase From Halobacterium Salinarum In Complex With Cdp Length = 164 Back     alignment and structure
>pdb|2AZ3|A Chain A, Structure Of A Halophilic Nucleoside Diphosphate Kinase From Halobacterium Salinarum In Complex With Cdp Length = 164 Back     alignment and structure
>pdb|2AZ1|A Chain A, Structure Of A Halophilic Nucleoside Diphosphate Kinase From Halobacterium Salinarum Length = 181 Back     alignment and structure
>pdb|2AZ1|A Chain A, Structure Of A Halophilic Nucleoside Diphosphate Kinase From Halobacterium Salinarum Length = 181 Back     alignment and structure
>pdb|3B54|A Chain A, Saccharomyces Cerevisiae Nucleoside Diphosphate Kinase Length = 161 Back     alignment and structure
>pdb|3B54|A Chain A, Saccharomyces Cerevisiae Nucleoside Diphosphate Kinase Length = 161 Back     alignment and structure
>pdb|1PKU|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Rice Length = 150 Back     alignment and structure
>pdb|1PKU|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Rice Length = 150 Back     alignment and structure
>pdb|1S57|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase 2 From Arabidopsis Length = 153 Back     alignment and structure
>pdb|1S57|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase 2 From Arabidopsis Length = 153 Back     alignment and structure
>pdb|1U8W|A Chain A, Crystal Structure Of Arabidopsis Thaliana Nucleoside Diphosphate Kinase 1 Length = 149 Back     alignment and structure
>pdb|1U8W|A Chain A, Crystal Structure Of Arabidopsis Thaliana Nucleoside Diphosphate Kinase 1 Length = 149 Back     alignment and structure
>pdb|1MN7|A Chain A, Ndp Kinase Mutant (H122g;n119s;f64w) In Complex With Abazttp Length = 155 Back     alignment and structure
>pdb|1MN7|A Chain A, Ndp Kinase Mutant (H122g;n119s;f64w) In Complex With Abazttp Length = 155 Back     alignment and structure
>pdb|2CWK|A Chain A, Crystal Structure Of Nucleotide Diphosphate Kinase From Pyrococcus Horikoshii Length = 160 Back     alignment and structure
>pdb|3PRV|A Chain A, Nucleoside Diphosphate Kinase B From Trypanosoma Cruzi Length = 157 Back     alignment and structure
>pdb|3PRV|A Chain A, Nucleoside Diphosphate Kinase B From Trypanosoma Cruzi Length = 157 Back     alignment and structure
>pdb|1W7W|A Chain A, Structure And Mutational Analysis Of A Plant Mitochondrial Nucleoside Diphosphate Kinase: Identification Of Residues Involved In Serine Phosphorylation And Oligomerization. Length = 182 Back     alignment and structure
>pdb|1W7W|A Chain A, Structure And Mutational Analysis Of A Plant Mitochondrial Nucleoside Diphosphate Kinase: Identification Of Residues Involved In Serine Phosphorylation And Oligomerization. Length = 182 Back     alignment and structure
>pdb|1LWX|A Chain A, Azt Diphosphate Binding To Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1LWX|A Chain A, Azt Diphosphate Binding To Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1HLW|A Chain A, Structure Of The H122a Mutant Of The Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1HLW|A Chain A, Structure Of The H122a Mutant Of The Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1PAE|X Chain X, Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1PAE|X Chain X, Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1LEO|A Chain A, P100s Nucleoside Diphosphate Kinase Length = 150 Back     alignment and structure
>pdb|1LEO|A Chain A, P100s Nucleoside Diphosphate Kinase Length = 150 Back     alignment and structure
>pdb|1NDP|A Chain A, Adenosine 5'-Diphosphate Binding And The Active Site Of Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1NDP|A Chain A, Adenosine 5'-Diphosphate Binding And The Active Site Of Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1NSP|A Chain A, Mechanism Of Phosphate Transfer By Nucleoside Diphosphate Kinase: X- Ray Structures Of A Phospho-Histidine Intermediate Of The Enzymes From Drosophila And Dictyostelium Length = 155 Back     alignment and structure
>pdb|1NSP|A Chain A, Mechanism Of Phosphate Transfer By Nucleoside Diphosphate Kinase: X- Ray Structures Of A Phospho-Histidine Intermediate Of The Enzymes From Drosophila And Dictyostelium Length = 155 Back     alignment and structure
>pdb|1NPK|A Chain A, Refined X-Ray Structure Of Dictyostelium Nucleoside Diphosphate Kinase At 1,8 Angstroms Resolution Length = 154 Back     alignment and structure
>pdb|1NPK|A Chain A, Refined X-Ray Structure Of Dictyostelium Nucleoside Diphosphate Kinase At 1,8 Angstroms Resolution Length = 154 Back     alignment and structure
>pdb|1B4S|A Chain A, Structure Of Nucleoside Diphosphate Kinase H122g Mutant Length = 155 Back     alignment and structure
>pdb|1B4S|A Chain A, Structure Of Nucleoside Diphosphate Kinase H122g Mutant Length = 155 Back     alignment and structure
>pdb|1NCL|A Chain A, Thermal Stability Of Hexameric And Tetrameric Nucleoside, Diphosphate Kinases Length = 150 Back     alignment and structure
>pdb|1NCL|A Chain A, Thermal Stability Of Hexameric And Tetrameric Nucleoside, Diphosphate Kinases Length = 150 Back     alignment and structure
>pdb|1NDK|A Chain A, X-Ray Structure Of Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1NDK|A Chain A, X-Ray Structure Of Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|2VU5|A Chain A, Crystal Structure Of Pndk From Bacillus Anthracis Length = 148 Back     alignment and structure
>pdb|1EHW|A Chain A, Human Nucleoside Diphosphate Kinase 4 Length = 162 Back     alignment and structure
>pdb|1EHW|A Chain A, Human Nucleoside Diphosphate Kinase 4 Length = 162 Back     alignment and structure
>pdb|1HHQ|A Chain A, Role Of Active Site Resiude Lys16 In Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|1HHQ|A Chain A, Role Of Active Site Resiude Lys16 In Nucleoside Diphosphate Kinase Length = 155 Back     alignment and structure
>pdb|3Q83|A Chain A, Crystal Structure Of Staphylococcus Aureus Nucleoside Diphosphate Kinase Length = 157 Back     alignment and structure
>pdb|2NCK|R Chain R, Crystal Structure Of Myxococcus Xanthus Nucleoside Diphosphate Kinase And Its Interaction With A Nucleotide Substrate At 2.0 Angstroms Resolution Length = 144 Back     alignment and structure
>pdb|1XQI|A Chain A, Crystal Structure Analysis Of An Ndp Kinase From Pyrobaculum Aerophilum Length = 195 Back     alignment and structure
>pdb|3MPD|A Chain A, Crystal Structure Of Nucleoside Diphosphate Kinase From Encephalitozoon Cuniculi, Cubic Form, Apo Length = 151 Back     alignment and structure
>pdb|1K44|A Chain A, Mycobacterium Tuberculosis Nucleoside Diphosphate Kinase Length = 136 Back     alignment and structure
>pdb|1K44|A Chain A, Mycobacterium Tuberculosis Nucleoside Diphosphate Kinase Length = 136 Back     alignment and structure
>pdb|4DI6|A Chain A, Crystal Structure Of Nucleoside-Diphosphate Kinase From Borrelia Burgdorferi Length = 190 Back     alignment and structure
>pdb|3PJ9|A Chain A, Crystal Structure Of A Nucleoside Diphosphate Kinase From Campylobacter Jejuni Length = 140 Back     alignment and structure
>pdb|2B8P|A Chain A, Crystal Structure Of Acanthamoeba Polyphaga Mimivirus Ndk, The First Viral Nucleoside Diphosphate Kinase Length = 157 Back     alignment and structure
>pdb|3EJM|A Chain A, Crystal Structure Of The Mimivirus Ndk +kpn Mutant Complexed With Gdp Length = 146 Back     alignment and structure
>pdb|3EM1|A Chain A, Crystal Structure Of The Mimivirus Ndk +kpn-N62l Double Mutant Complexed With Dtdp Length = 146 Back     alignment and structure
>pdb|3DDI|A Chain A, Crystal Structure Of The Mimivirus Ndk +kpn-N62l-R107g Triple Mutant Complexed With Tdp Length = 146 Back     alignment and structure
>pdb|3EMT|A Chain A, Crystal Structure Of The Mimivirus Ndk +kpn-R107g Double Mutant Complexed With Dgdp Length = 146 Back     alignment and structure
>pdb|2B8Q|A Chain A, X-Ray Structure Of Acanthamoeba Ployphaga Mimivirus Nucleoside Diphosphate Kinase Complexed With Tdp Length = 142 Back     alignment and structure
>pdb|3FBF|A Chain A, Crystal Structure Of The Mimivirus Ndk N62l Mutant Complexed With Dtdp Length = 142 Back     alignment and structure
>pdb|2HUR|A Chain A, Escherichia Coli Nucleoside Diphosphate Kinase Length = 142 Back     alignment and structure
>pdb|3FBE|A Chain A, Crystal Structure Of The Mimivirus Ndk N62l-R107g Double Mutant Complexed With Gdp Length = 142 Back     alignment and structure
>pdb|3EVW|A Chain A, Crystal Structure Of The Mimivirus Ndk R107g Mutant Complexed With Dtdp Length = 142 Back     alignment and structure
>pdb|3VGU|A Chain A, E134a Mutant Nucleoside Diphosphate Kinase Derived From Halomonas Sp. 593 Length = 141 Back     alignment and structure
>pdb|3VGS|A Chain A, Wild-Type Nucleoside Diphosphate Kinase Derived From Halomonas Sp. 593 Length = 141 Back     alignment and structure
>pdb|4DUT|A Chain A, The Structure Of Nucleoside Diphosphate Kinase (Ndk) From Burkholderia Thailandensis Length = 145 Back     alignment and structure
>pdb|3ZTQ|A Chain A, Hexagonal Crystal Form P61 Of The Aquifex Aeolicus Nucleoside Diphosphate Kinase Length = 142 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query179
1xqi_A195 Nucleoside diphosphate kinase; alpha/beta sandwich 6e-33
1zs6_A169 Nucleoside diphosphate kinase 3; nucleotide metabo 4e-29
1zs6_A169 Nucleoside diphosphate kinase 3; nucleotide metabo 1e-17
3b54_A161 NDK, NDP kinase, nucleoside diphosphate kinase; al 2e-25
3b54_A161 NDK, NDP kinase, nucleoside diphosphate kinase; al 9e-18
2az3_A164 Nucleoside diphosphate kinase; halophilic, transfe 6e-25
2az3_A164 Nucleoside diphosphate kinase; halophilic, transfe 1e-17
3bbb_A151 Nucleoside diphosphate kinase B; transcription fac 4e-24
3bbb_A151 Nucleoside diphosphate kinase B; transcription fac 5e-18
4dz6_A190 Nucleoside diphosphate kinase; ssgcid, niaid, vana 4e-24
4dz6_A190 Nucleoside diphosphate kinase; ssgcid, niaid, vana 1e-13
3r9l_A155 Nucleoside diphosphate kinase; structural genomics 6e-24
3r9l_A155 Nucleoside diphosphate kinase; structural genomics 8e-18
1xiq_A157 Nucleoside diphosphate kinase B; protein structure 6e-24
1xiq_A157 Nucleoside diphosphate kinase B; protein structure 9e-18
3js9_A156 Nucleoside diphosphate kinase family protein; niai 7e-24
3js9_A156 Nucleoside diphosphate kinase family protein; niai 8e-18
3l7u_A172 Nucleoside diphosphate kinase A; ATP-binding, nucl 8e-24
3l7u_A172 Nucleoside diphosphate kinase A; ATP-binding, nucl 8e-18
4fkx_A161 NDK B, nucleoside diphosphate kinase; structural g 9e-24
4fkx_A161 NDK B, nucleoside diphosphate kinase; structural g 2e-17
2vu5_A148 Nucleoside diphosphate kinase; nucleotide-binding, 9e-24
2vu5_A148 Nucleoside diphosphate kinase; nucleotide-binding, 1e-17
1nb2_A150 Nucleoside diphosphate kinase; bacillus halodenitr 9e-24
1nb2_A150 Nucleoside diphosphate kinase; bacillus halodenitr 1e-17
1pku_A150 Nucleoside diphosphate kinase I; RICE, transferase 1e-23
1pku_A150 Nucleoside diphosphate kinase I; RICE, transferase 7e-18
1s57_A153 Nucleoside diphosphate kinase II; transferase; HET 1e-23
1s57_A153 Nucleoside diphosphate kinase II; transferase; HET 1e-17
1k44_A136 Nucleoside diphosphate kinase; nucleoside triphosp 1e-23
1k44_A136 Nucleoside diphosphate kinase; nucleoside triphosp 2e-17
1u8w_A149 Nucleoside diphosphate kinase I; nucleotide diphos 1e-23
1u8w_A149 Nucleoside diphosphate kinase I; nucleotide diphos 8e-18
1wkj_A137 Nucleoside diphosphate kinase; thermus thermophilu 1e-23
1wkj_A137 Nucleoside diphosphate kinase; thermus thermophilu 3e-17
3fkb_A155 NDP kinase, NDK, nucleoside diphosphate kinase, cy 2e-23
3fkb_A155 NDP kinase, NDK, nucleoside diphosphate kinase, cy 2e-17
1nhk_R144 Nucleoside diphosphate kinase; phosphotransferase; 2e-23
1nhk_R144 Nucleoside diphosphate kinase; phosphotransferase; 6e-17
1ehw_A162 NDPK H4, nucleoside diphosphate kinase; NM23, mito 2e-23
1ehw_A162 NDPK H4, nucleoside diphosphate kinase; NM23, mito 4e-17
2hur_A142 NDK, nucleoside diphosphate kinase, NDP kinase; ty 2e-23
2hur_A142 NDK, nucleoside diphosphate kinase, NDP kinase; ty 6e-17
3q8u_A157 Nucleoside diphosphate kinase; ferridoxin fold, al 2e-23
3q8u_A157 Nucleoside diphosphate kinase; ferridoxin fold, al 1e-17
3mpd_A151 Nucleoside diphosphate kinase; ssgcid, NIH, niaid, 2e-23
3mpd_A151 Nucleoside diphosphate kinase; ssgcid, NIH, niaid, 3e-17
1w7w_A182 Nucleoside diphosphate kinase; NDPK3, transferase; 2e-23
1w7w_A182 Nucleoside diphosphate kinase; NDPK3, transferase; 3e-17
4ek2_A145 Nucleoside diphosphate kinase; seattle structural 7e-23
4ek2_A145 Nucleoside diphosphate kinase; seattle structural 2e-16
2dxe_A160 Nucleoside diphosphate kinase; nucleoside binding, 8e-23
2dxe_A160 Nucleoside diphosphate kinase; nucleoside binding, 1e-16
3ztp_A142 Nucleoside diphosphate kinase; transferase; HET: G 8e-23
3ztp_A142 Nucleoside diphosphate kinase; transferase; HET: G 3e-16
3evo_A146 NDP kinase, NDK, nucleoside diphosphate kinase; ph 3e-22
3evo_A146 NDP kinase, NDK, nucleoside diphosphate kinase; ph 2e-16
>1xqi_A Nucleoside diphosphate kinase; alpha/beta sandwich, ferredoxin fold, transferase; HET: PGE; 2.50A {Pyrobaculum aerophilum} SCOP: d.58.6.1 Length = 195 Back     alignment and structure
 Score =  115 bits (289), Expect = 6e-33
 Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 52/173 (30%)

Query: 6   LHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCVS 65
           +H + I    ++  P E+T L++KPD V RGLV  II RF+  G K+VA+K V       
Sbjct: 1   MHAINIAFFDLIM-PVEKTLLILKPDAVARGLVDEIISRFKKAGLKIVALKMVK------ 53

Query: 66  FLEKKSACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDYELFPAERQF 125
                                       +   +                 Y       + 
Sbjct: 54  ---------------------------ASPEEIERF--------------Y----PSSEE 68

Query: 126 YCLNNYLTTCKLLTEMGIPSEELLKQHYSDLATKPFFPGLVKYMSSGPVVPMV 178
           +  +      K   E+GI     +         +     LVKYM+SGP V MV
Sbjct: 69  WLQSAGQKLLKAYQELGIDPRAKIGTDDPVEVGRIIKRNLVKYMTSGPNVVMV 121


>1zs6_A Nucleoside diphosphate kinase 3; nucleotide metabolism, apoptosis, transferase, struc genomics, structural genomics consortium, SGC; HET: ADP; 2.30A {Homo sapiens} SCOP: d.58.6.1 Length = 169 Back     alignment and structure
>1zs6_A Nucleoside diphosphate kinase 3; nucleotide metabolism, apoptosis, transferase, struc genomics, structural genomics consortium, SGC; HET: ADP; 2.30A {Homo sapiens} SCOP: d.58.6.1 Length = 169 Back     alignment and structure
>3b54_A NDK, NDP kinase, nucleoside diphosphate kinase; alpha/beta sandwich, ATP-binding, magnesium, metal-B mitochondrion; 3.10A {Saccharomyces cerevisiae} Length = 161 Back     alignment and structure
>3b54_A NDK, NDP kinase, nucleoside diphosphate kinase; alpha/beta sandwich, ATP-binding, magnesium, metal-B mitochondrion; 3.10A {Saccharomyces cerevisiae} Length = 161 Back     alignment and structure
>2az3_A Nucleoside diphosphate kinase; halophilic, transferase; HET: CDP; 2.20A {Halobacterium salinarum} SCOP: d.58.6.1 PDB: 2az1_A 2zua_A Length = 164 Back     alignment and structure
>2az3_A Nucleoside diphosphate kinase; halophilic, transferase; HET: CDP; 2.20A {Halobacterium salinarum} SCOP: d.58.6.1 PDB: 2az1_A 2zua_A Length = 164 Back     alignment and structure
>3bbb_A Nucleoside diphosphate kinase B; transcription factor, cancer, NM23 GEN, hexamer, activator, oncogene, ATP-binding, cell cycle, DNA-binding; HET: DG DA; 1.30A {Homo sapiens} SCOP: d.58.6.1 PDB: 1nue_A* 3bbf_A* 1nsk_R 3bbc_A 1be4_A* 1bhn_A* 2hvd_A* 1jxv_A* 2hve_A* 1ucn_A* 1nsq_A* 1ndl_A* Length = 151 Back     alignment and structure
>3bbb_A Nucleoside diphosphate kinase B; transcription factor, cancer, NM23 GEN, hexamer, activator, oncogene, ATP-binding, cell cycle, DNA-binding; HET: DG DA; 1.30A {Homo sapiens} SCOP: d.58.6.1 PDB: 1nue_A* 3bbf_A* 1nsk_R 3bbc_A 1be4_A* 1bhn_A* 2hvd_A* 1jxv_A* 2hve_A* 1ucn_A* 1nsq_A* 1ndl_A* Length = 151 Back     alignment and structure
>4dz6_A Nucleoside diphosphate kinase; ssgcid, niaid, vanada transition state mimic, transition state analog, transferas; HET: ADP; 2.20A {Borrelia burgdorferi} PDB: 4di6_A* Length = 190 Back     alignment and structure
>4dz6_A Nucleoside diphosphate kinase; ssgcid, niaid, vanada transition state mimic, transition state analog, transferas; HET: ADP; 2.20A {Borrelia burgdorferi} PDB: 4di6_A* Length = 190 Back     alignment and structure
>3r9l_A Nucleoside diphosphate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, giardiasis; 2.65A {Giardia lamblia} Length = 155 Back     alignment and structure
>3r9l_A Nucleoside diphosphate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, giardiasis; 2.65A {Giardia lamblia} Length = 155 Back     alignment and structure
>1xiq_A Nucleoside diphosphate kinase B; protein structure initiative, structural genomics, SGPP; 3.05A {Plasmodium falciparum} SCOP: d.58.6.1 Length = 157 Back     alignment and structure
>1xiq_A Nucleoside diphosphate kinase B; protein structure initiative, structural genomics, SGPP; 3.05A {Plasmodium falciparum} SCOP: d.58.6.1 Length = 157 Back     alignment and structure
>3js9_A Nucleoside diphosphate kinase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, babesiosis; 2.50A {Babesia bovis} Length = 156 Back     alignment and structure
>3js9_A Nucleoside diphosphate kinase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, babesiosis; 2.50A {Babesia bovis} Length = 156 Back     alignment and structure
>3l7u_A Nucleoside diphosphate kinase A; ATP-binding, nucleotide-binding, transferase, tumor suppressor; 2.10A {Homo sapiens} Length = 172 Back     alignment and structure
>3l7u_A Nucleoside diphosphate kinase A; ATP-binding, nucleotide-binding, transferase, tumor suppressor; 2.10A {Homo sapiens} Length = 172 Back     alignment and structure
>4fkx_A NDK B, nucleoside diphosphate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CDP; 1.70A {Trypanosoma brucei brucei} PDB: 4fky_A* 4f4a_A* 4f36_A* 3prv_A 3ngs_A 3ngr_A 3ngt_A* 3ngu_A* Length = 161 Back     alignment and structure
>4fkx_A NDK B, nucleoside diphosphate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CDP; 1.70A {Trypanosoma brucei brucei} PDB: 4fky_A* 4f4a_A* 4f36_A* 3prv_A 3ngs_A 3ngr_A 3ngt_A* 3ngu_A* Length = 161 Back     alignment and structure
>2vu5_A Nucleoside diphosphate kinase; nucleotide-binding, ATP-binding, metal-binding, phosphoprotein, nucleotide metabolism, cytoplasm, magnesium; 2.0A {Bacillus anthracis} Length = 148 Back     alignment and structure
>2vu5_A Nucleoside diphosphate kinase; nucleotide-binding, ATP-binding, metal-binding, phosphoprotein, nucleotide metabolism, cytoplasm, magnesium; 2.0A {Bacillus anthracis} Length = 148 Back     alignment and structure
>1nb2_A Nucleoside diphosphate kinase; bacillus halodenitrifians, transferase; 2.20A {Virgibacillus halodenitrificans} SCOP: d.58.6.1 Length = 150 Back     alignment and structure
>1nb2_A Nucleoside diphosphate kinase; bacillus halodenitrifians, transferase; 2.20A {Virgibacillus halodenitrificans} SCOP: d.58.6.1 Length = 150 Back     alignment and structure
>1pku_A Nucleoside diphosphate kinase I; RICE, transferase; 2.50A {Oryza sativa} SCOP: d.58.6.1 Length = 150 Back     alignment and structure
>1pku_A Nucleoside diphosphate kinase I; RICE, transferase; 2.50A {Oryza sativa} SCOP: d.58.6.1 Length = 150 Back     alignment and structure
>1s57_A Nucleoside diphosphate kinase II; transferase; HET: EPE; 1.80A {Arabidopsis thaliana} SCOP: d.58.6.1 PDB: 1s59_A* Length = 153 Back     alignment and structure
>1s57_A Nucleoside diphosphate kinase II; transferase; HET: EPE; 1.80A {Arabidopsis thaliana} SCOP: d.58.6.1 PDB: 1s59_A* Length = 153 Back     alignment and structure
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1 Length = 136 Back     alignment and structure
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1 Length = 136 Back     alignment and structure
>1u8w_A Nucleoside diphosphate kinase I; nucleotide diphosphate, transferase; 2.40A {Arabidopsis thaliana} SCOP: d.58.6.1 Length = 149 Back     alignment and structure
>1u8w_A Nucleoside diphosphate kinase I; nucleotide diphosphate, transferase; 2.40A {Arabidopsis thaliana} SCOP: d.58.6.1 Length = 149 Back     alignment and structure
>1wkj_A Nucleoside diphosphate kinase; thermus thermophilus HB8, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: d.58.6.1 PDB: 1wkk_A* 1wkl_A* Length = 137 Back     alignment and structure
>1wkj_A Nucleoside diphosphate kinase; thermus thermophilus HB8, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: d.58.6.1 PDB: 1wkk_A* 1wkl_A* Length = 137 Back     alignment and structure
>3fkb_A NDP kinase, NDK, nucleoside diphosphate kinase, cytosolic; AN hexamer structure, ATP-binding, magnesium, metal- nucleotide metabolism; HET: TNM TNV; 1.65A {Dictyostelium discoideum} PDB: 1b4s_A* 1mn9_A* 1f3f_A* 1hlw_A 1ndk_A 1pae_X 1f6t_A* 1bux_A* 1b99_A* 1hiy_A* 1kdn_A* 1ndc_A* 1ndp_A* 1nsp_A* 1s5z_A* 2bef_A* 1mn7_A* 1hhq_A 1lwx_A* 1npk_A ... Length = 155 Back     alignment and structure
>3fkb_A NDP kinase, NDK, nucleoside diphosphate kinase, cytosolic; AN hexamer structure, ATP-binding, magnesium, metal- nucleotide metabolism; HET: TNM TNV; 1.65A {Dictyostelium discoideum} PDB: 1b4s_A* 1mn9_A* 1f3f_A* 1hlw_A 1ndk_A 1pae_X 1f6t_A* 1bux_A* 1b99_A* 1hiy_A* 1kdn_A* 1ndc_A* 1ndp_A* 1nsp_A* 1s5z_A* 2bef_A* 1mn7_A* 1hhq_A 1lwx_A* 1npk_A ... Length = 155 Back     alignment and structure
>1nhk_R Nucleoside diphosphate kinase; phosphotransferase; HET: CMP; 1.90A {Myxococcus xanthus} SCOP: d.58.6.1 PDB: 1nlk_R* 2nck_R 3pj9_A Length = 144 Back     alignment and structure
>1nhk_R Nucleoside diphosphate kinase; phosphotransferase; HET: CMP; 1.90A {Myxococcus xanthus} SCOP: d.58.6.1 PDB: 1nlk_R* 2nck_R 3pj9_A Length = 144 Back     alignment and structure
>1ehw_A NDPK H4, nucleoside diphosphate kinase; NM23, mitochondrial, killer-O transferase; 2.40A {Homo sapiens} SCOP: d.58.6.1 Length = 162 Back     alignment and structure
>1ehw_A NDPK H4, nucleoside diphosphate kinase; NM23, mitochondrial, killer-O transferase; 2.40A {Homo sapiens} SCOP: d.58.6.1 Length = 162 Back     alignment and structure
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli} Length = 142 Back     alignment and structure
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli} Length = 142 Back     alignment and structure
>3q8u_A Nucleoside diphosphate kinase; ferridoxin fold, alpha-beta protein family; HET: ADP; 2.22A {Staphylococcus aureus subsp} PDB: 3q83_A* 3q89_A* 3q86_A* 3q8v_A* 3q8y_A* Length = 157 Back     alignment and structure
>3q8u_A Nucleoside diphosphate kinase; ferridoxin fold, alpha-beta protein family; HET: ADP; 2.22A {Staphylococcus aureus subsp} PDB: 3q83_A* 3q89_A* 3q86_A* 3q8v_A* 3q8y_A* Length = 157 Back     alignment and structure
>3mpd_A Nucleoside diphosphate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, encepha cuniculi, structural genomics; 2.08A {Encephalitozoon cuniculi} Length = 151 Back     alignment and structure
>3mpd_A Nucleoside diphosphate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, encepha cuniculi, structural genomics; 2.08A {Encephalitozoon cuniculi} Length = 151 Back     alignment and structure
>1w7w_A Nucleoside diphosphate kinase; NDPK3, transferase; 2.80A {Pisum sativum} SCOP: d.58.6.1 Length = 182 Back     alignment and structure
>1w7w_A Nucleoside diphosphate kinase; NDPK3, transferase; 2.80A {Pisum sativum} SCOP: d.58.6.1 Length = 182 Back     alignment and structure
>4ek2_A Nucleoside diphosphate kinase; seattle structural genomics center for infectious disease, S DAMP, niaid; HET: DA; 2.00A {Burkholderia thailandensis} PDB: 4dut_A* Length = 145 Back     alignment and structure
>4ek2_A Nucleoside diphosphate kinase; seattle structural genomics center for infectious disease, S DAMP, niaid; HET: DA; 2.00A {Burkholderia thailandensis} PDB: 4dut_A* Length = 145 Back     alignment and structure
>2dxe_A Nucleoside diphosphate kinase; nucleoside binding, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: d.58.6.1 PDB: 2dxd_A* 2cwk_A* 2dxf_A* 2dy9_A* 2dya_A* Length = 160 Back     alignment and structure
>2dxe_A Nucleoside diphosphate kinase; nucleoside binding, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: d.58.6.1 PDB: 2dxd_A* 2cwk_A* 2dxf_A* 2dy9_A* 2dya_A* Length = 160 Back     alignment and structure
>3ztp_A Nucleoside diphosphate kinase; transferase; HET: GOL; 1.37A {Aquifex aeolicus} PDB: 3zto_A* 3ztq_A 3ztr_A 3zts_A Length = 142 Back     alignment and structure
>3ztp_A Nucleoside diphosphate kinase; transferase; HET: GOL; 1.37A {Aquifex aeolicus} PDB: 3zto_A* 3ztq_A 3ztr_A 3zts_A Length = 142 Back     alignment and structure
>3evo_A NDP kinase, NDK, nucleoside diphosphate kinase; phosphotransferase nucleotide binding, ATP-binding, magnesium, metal-binding; HET: TYD; 1.50A {Acanthamoeba polyphaga mimivirus} PDB: 3ejm_A* 3emt_A* 3em1_A* 3fc9_A* 3g2x_A* 3ena_A* 3dkd_A* 3ddi_A* 3etm_A* 3evm_A* 3fcv_A* 3b6b_A* 2b8p_A* 3gp9_A* 2b8q_A* 3ee3_A* 3elh_A* 3eic_A* 3evw_A* 3gpa_A* ... Length = 146 Back     alignment and structure
>3evo_A NDP kinase, NDK, nucleoside diphosphate kinase; phosphotransferase nucleotide binding, ATP-binding, magnesium, metal-binding; HET: TYD; 1.50A {Acanthamoeba polyphaga mimivirus} PDB: 3ejm_A* 3emt_A* 3em1_A* 3fc9_A* 3g2x_A* 3ena_A* 3dkd_A* 3ddi_A* 3etm_A* 3evm_A* 3fcv_A* 3b6b_A* 2b8p_A* 3gp9_A* 2b8q_A* 3ee3_A* 3elh_A* 3eic_A* 3evw_A* 3gpa_A* ... Length = 146 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query179
1zs6_A169 Nucleoside diphosphate kinase 3; nucleotide metabo 100.0
4hr2_A145 Nucleoside diphosphate kinase; ssgcid, seattle str 100.0
4fkx_A161 NDK B, nucleoside diphosphate kinase; structural g 100.0
3l7u_A172 Nucleoside diphosphate kinase A; ATP-binding, nucl 100.0
3b54_A161 NDK, NDP kinase, nucleoside diphosphate kinase; al 100.0
3mpd_A151 Nucleoside diphosphate kinase; ssgcid, NIH, niaid, 100.0
3evo_A146 NDP kinase, NDK, nucleoside diphosphate kinase; ph 100.0
3q8u_A157 Nucleoside diphosphate kinase; ferridoxin fold, al 100.0
1wkj_A137 Nucleoside diphosphate kinase; thermus thermophilu 100.0
1xiq_A157 Nucleoside diphosphate kinase B; protein structure 99.98
3fkb_A155 NDP kinase, NDK, nucleoside diphosphate kinase, cy 99.98
1k44_A136 Nucleoside diphosphate kinase; nucleoside triphosp 99.98
2hur_A142 NDK, nucleoside diphosphate kinase, NDP kinase; ty 99.98
3r9l_A155 Nucleoside diphosphate kinase; structural genomics 99.98
1nhk_R144 Nucleoside diphosphate kinase; phosphotransferase; 99.98
2vu5_A148 Nucleoside diphosphate kinase; nucleotide-binding, 99.98
1s57_A153 Nucleoside diphosphate kinase II; transferase; HET 99.98
3bbb_A151 Nucleoside diphosphate kinase B; transcription fac 99.98
1pku_A150 Nucleoside diphosphate kinase I; RICE, transferase 99.98
2az3_A164 Nucleoside diphosphate kinase; halophilic, transfe 99.97
1u8w_A149 Nucleoside diphosphate kinase I; nucleotide diphos 99.97
2dxe_A160 Nucleoside diphosphate kinase; nucleoside binding, 99.97
1nb2_A150 Nucleoside diphosphate kinase; bacillus halodenitr 99.97
3ztp_A142 Nucleoside diphosphate kinase; transferase; HET: G 99.97
1ehw_A162 NDPK H4, nucleoside diphosphate kinase; NM23, mito 99.97
3js9_A156 Nucleoside diphosphate kinase family protein; niai 99.97
1w7w_A182 Nucleoside diphosphate kinase; NDPK3, transferase; 99.97
4dz6_A190 Nucleoside diphosphate kinase; ssgcid, niaid, vana 99.97
1xqi_A195 Nucleoside diphosphate kinase; alpha/beta sandwich 99.96
3bh7_B352 Protein XRP2; protein-protein complex, GTPase acti 99.82
4hr2_A145 Nucleoside diphosphate kinase; ssgcid, seattle str 99.46
1k44_A136 Nucleoside diphosphate kinase; nucleoside triphosp 99.45
3mpd_A151 Nucleoside diphosphate kinase; ssgcid, NIH, niaid, 99.45
3evo_A146 NDP kinase, NDK, nucleoside diphosphate kinase; ph 99.45
3ztp_A142 Nucleoside diphosphate kinase; transferase; HET: G 99.44
1wkj_A137 Nucleoside diphosphate kinase; thermus thermophilu 99.44
2hur_A142 NDK, nucleoside diphosphate kinase, NDP kinase; ty 99.44
1nhk_R144 Nucleoside diphosphate kinase; phosphotransferase; 99.44
4fkx_A161 NDK B, nucleoside diphosphate kinase; structural g 99.44
3js9_A156 Nucleoside diphosphate kinase family protein; niai 99.44
3fkb_A155 NDP kinase, NDK, nucleoside diphosphate kinase, cy 99.44
2vu5_A148 Nucleoside diphosphate kinase; nucleotide-binding, 99.43
3q8u_A157 Nucleoside diphosphate kinase; ferridoxin fold, al 99.43
1s57_A153 Nucleoside diphosphate kinase II; transferase; HET 99.42
1pku_A150 Nucleoside diphosphate kinase I; RICE, transferase 99.42
1u8w_A149 Nucleoside diphosphate kinase I; nucleotide diphos 99.42
2az3_A164 Nucleoside diphosphate kinase; halophilic, transfe 99.41
3bbb_A151 Nucleoside diphosphate kinase B; transcription fac 99.41
1xiq_A157 Nucleoside diphosphate kinase B; protein structure 99.41
2dxe_A160 Nucleoside diphosphate kinase; nucleoside binding, 99.41
1ehw_A162 NDPK H4, nucleoside diphosphate kinase; NM23, mito 99.4
1nb2_A150 Nucleoside diphosphate kinase; bacillus halodenitr 99.4
1zs6_A169 Nucleoside diphosphate kinase 3; nucleotide metabo 99.4
3l7u_A172 Nucleoside diphosphate kinase A; ATP-binding, nucl 99.4
3b54_A161 NDK, NDP kinase, nucleoside diphosphate kinase; al 99.39
1w7w_A182 Nucleoside diphosphate kinase; NDPK3, transferase; 99.37
3r9l_A155 Nucleoside diphosphate kinase; structural genomics 99.37
4dz6_A190 Nucleoside diphosphate kinase; ssgcid, niaid, vana 99.25
1xqi_A195 Nucleoside diphosphate kinase; alpha/beta sandwich 99.09
3bh7_B352 Protein XRP2; protein-protein complex, GTPase acti 98.69
1wr1_B58 Ubiquitin-like protein DSK2; UBA domain, UBA-ubiqu 89.43
2jy5_A52 Ubiquilin-1; UBA, alternative splicing, cytoplasm, 89.41
2knz_A53 Ubiquilin-4; cytoplasm, endoplasmic reticulum, nuc 87.66
2bwb_A46 Ubiquitin-like protein DSK2; UBA, signaling protei 83.08
>1zs6_A Nucleoside diphosphate kinase 3; nucleotide metabolism, apoptosis, transferase, struc genomics, structural genomics consortium, SGC; HET: ADP; 2.30A {Homo sapiens} SCOP: d.58.6.1 Back     alignment and structure
Probab=100.00  E-value=9.9e-36  Score=241.96  Aligned_cols=117  Identities=37%  Similarity=0.535  Sum_probs=95.6

Q ss_pred             ChhHHHHHHHHHHHHhhcCccceEEEEEcCccccCCchHHHHHHHHHcCcEEEEeehhhhhhhh---hhhhhhhccCCCC
Q psy3715           1 MICTVLHLLYIVIHKIMAEPKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCV---SFLEKKSACCRMV   77 (179)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~erTl~~IKPD~~~~g~~g~Ii~~~~~~G~kiv~~K~~~~s~~~---hY~ehkdk~~~Ff   77 (179)
                      ||||+++++.--.-.++....||||++||||++++|++|+||++|+.+||+|+++|+.+++.++   ||++|++|  |||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~erTl~iIKPDav~~~l~GeIi~rie~~Gf~Iv~~k~~~ls~e~a~~fY~~h~~k--pff   78 (169)
T 1zs6_A            1 MICLVLTIFANLFPAACTGAHERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRER--PFY   78 (169)
T ss_dssp             -----------------CGGGCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHTGGGTTS--TTH
T ss_pred             ChhhHHhHhccCcchhhhhhhccEEEEEChhhhhcccHHHHHHHHHHCCCEEEEEEEecCCHHHHHHHHHHHcCC--Cch
Confidence            7899999887655555667789999999999999999999999999999999999999888665   99999999  999


Q ss_pred             CCchhhhhhCceE--------EEeeehhhccCCCCCCCCCCceeeecccc
Q psy3715          78 SSVPAYEISGKLL--------VGITYSTVLGHLNLETSECPLFHIDYELF  119 (179)
Q Consensus        78 ~~l~~~m~sgPvl--------aV~~~R~mlG~TnP~~A~pGTIRgdF~~~  119 (179)
                      ++|++||+|||++        ||++||.|+|+|||.+|.||||||||+.+
T Consensus        79 ~~Lv~~mtSGPvvamvleg~~aV~~~R~l~G~t~p~~A~pgtIR~~fg~~  128 (169)
T 1zs6_A           79 GRLVKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIE  128 (169)
T ss_dssp             HHHHHHHTSSCEEEEEEESTTHHHHHHHHHCCSSGGGSCTTSHHHHHCCS
T ss_pred             HHHHHHhcCCCEEEEEEecCCchHHHHHHhCCCCcccCCCCChHHHHcCC
Confidence            9999999999999        89999999999999999999999999874



>4hr2_A Nucleoside diphosphate kinase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: ADP; 1.95A {Burkholderia thailandensis} PDB: 4dut_A* 4ek2_A* Back     alignment and structure
>4fkx_A NDK B, nucleoside diphosphate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CDP; 1.70A {Trypanosoma brucei brucei} PDB: 4fky_A* 4f4a_A* 4f36_A* 3prv_A 3ngs_A 3ngr_A 3ngt_A* 3ngu_A* Back     alignment and structure
>3l7u_A Nucleoside diphosphate kinase A; ATP-binding, nucleotide-binding, transferase, tumor suppressor; 2.10A {Homo sapiens} Back     alignment and structure
>3b54_A NDK, NDP kinase, nucleoside diphosphate kinase; alpha/beta sandwich, ATP-binding, magnesium, metal-B mitochondrion; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>3mpd_A Nucleoside diphosphate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, encepha cuniculi, structural genomics; 2.08A {Encephalitozoon cuniculi} SCOP: d.58.6.0 Back     alignment and structure
>3evo_A NDP kinase, NDK, nucleoside diphosphate kinase; phosphotransferase nucleotide binding, ATP-binding, magnesium, metal-binding; HET: TYD; 1.50A {Acanthamoeba polyphaga mimivirus} SCOP: d.58.6.1 PDB: 3ejm_A* 3emt_A* 3em1_A* 3fc9_A* 3g2x_A* 3ena_A* 3dkd_A* 3ddi_A* 3etm_A* 3evm_A* 3fcv_A* 3b6b_A* 2b8p_A* 3gp9_A* 2b8q_A* 3ee3_A* 3elh_A* 3eic_A* 3evw_A* 3gpa_A* ... Back     alignment and structure
>3q8u_A Nucleoside diphosphate kinase; ferridoxin fold, alpha-beta protein family; HET: ADP; 2.22A {Staphylococcus aureus subsp} PDB: 3q83_A* 3q89_A* 3q86_A* 3q8v_A* 3q8y_A* Back     alignment and structure
>1wkj_A Nucleoside diphosphate kinase; thermus thermophilus HB8, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: d.58.6.1 PDB: 1wkk_A* 1wkl_A* Back     alignment and structure
>1xiq_A Nucleoside diphosphate kinase B; protein structure initiative, structural genomics, SGPP; 3.05A {Plasmodium falciparum} SCOP: d.58.6.1 Back     alignment and structure
>3fkb_A NDP kinase, NDK, nucleoside diphosphate kinase, cytosolic; AN hexamer structure, ATP-binding, magnesium, metal- nucleotide metabolism; HET: TNM TNV; 1.65A {Dictyostelium discoideum} SCOP: d.58.6.1 PDB: 1b4s_A* 1mn9_A* 1f3f_A* 1hlw_A 1ndk_A 1pae_X 1f6t_A* 1bux_A* 1b99_A* 1hiy_A* 1kdn_A* 1ndc_A* 1ndp_A* 1nsp_A* 1s5z_A* 2bef_A* 1mn7_A* 1hhq_A 1lwx_A* 1npk_A ... Back     alignment and structure
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1 Back     alignment and structure
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli} Back     alignment and structure
>3r9l_A Nucleoside diphosphate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, giardiasis; 2.65A {Giardia lamblia} SCOP: d.58.6.1 Back     alignment and structure
>1nhk_R Nucleoside diphosphate kinase; phosphotransferase; HET: CMP; 1.90A {Myxococcus xanthus} SCOP: d.58.6.1 PDB: 1nlk_R* 2nck_R 3pj9_A Back     alignment and structure
>2vu5_A Nucleoside diphosphate kinase; nucleotide-binding, ATP-binding, metal-binding, phosphoprotein, nucleotide metabolism, cytoplasm, magnesium; 2.0A {Bacillus anthracis} Back     alignment and structure
>1s57_A Nucleoside diphosphate kinase II; transferase; HET: EPE; 1.80A {Arabidopsis thaliana} SCOP: d.58.6.1 PDB: 1s59_A* Back     alignment and structure
>3bbb_A Nucleoside diphosphate kinase B; transcription factor, cancer, NM23 GEN, hexamer, activator, oncogene, ATP-binding, cell cycle, DNA-binding; HET: DG DA; 1.30A {Homo sapiens} SCOP: d.58.6.1 PDB: 1nue_A* 3bbf_A* 1nsk_R 3bbc_A 1be4_A* 1bhn_A* 2hvd_A* 1jxv_A* 2hve_A* 1ucn_A* 1nsq_A* 1ndl_A* Back     alignment and structure
>1pku_A Nucleoside diphosphate kinase I; RICE, transferase; 2.50A {Oryza sativa} SCOP: d.58.6.1 Back     alignment and structure
>2az3_A Nucleoside diphosphate kinase; halophilic, transferase; HET: CDP; 2.20A {Halobacterium salinarum} SCOP: d.58.6.1 PDB: 2az1_A 2zua_A Back     alignment and structure
>1u8w_A Nucleoside diphosphate kinase I; nucleotide diphosphate, transferase; 2.40A {Arabidopsis thaliana} SCOP: d.58.6.1 Back     alignment and structure
>2dxe_A Nucleoside diphosphate kinase; nucleoside binding, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: d.58.6.1 PDB: 2dxd_A* 2cwk_A* 2dxf_A* 2dy9_A* 2dya_A* Back     alignment and structure
>1nb2_A Nucleoside diphosphate kinase; bacillus halodenitrifians, transferase; 2.20A {Virgibacillus halodenitrificans} SCOP: d.58.6.1 Back     alignment and structure
>3ztp_A Nucleoside diphosphate kinase; transferase; HET: GOL; 1.37A {Aquifex aeolicus} PDB: 3zto_A* 3ztq_A 3ztr_A 3zts_A Back     alignment and structure
>1ehw_A NDPK H4, nucleoside diphosphate kinase; NM23, mitochondrial, killer-O transferase; 2.40A {Homo sapiens} SCOP: d.58.6.1 Back     alignment and structure
>3js9_A Nucleoside diphosphate kinase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, babesiosis; 2.50A {Babesia bovis} SCOP: d.58.6.0 Back     alignment and structure
>1w7w_A Nucleoside diphosphate kinase; NDPK3, transferase; 2.80A {Pisum sativum} SCOP: d.58.6.1 Back     alignment and structure
>4dz6_A Nucleoside diphosphate kinase; ssgcid, niaid, vanada transition state mimic, transition state analog, transferas; HET: ADP; 2.20A {Borrelia burgdorferi} PDB: 4di6_A* Back     alignment and structure
>1xqi_A Nucleoside diphosphate kinase; alpha/beta sandwich, ferredoxin fold, transferase; HET: PGE; 2.50A {Pyrobaculum aerophilum} SCOP: d.58.6.1 Back     alignment and structure
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A Back     alignment and structure
>4hr2_A Nucleoside diphosphate kinase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: ADP; 1.95A {Burkholderia thailandensis} PDB: 4dut_A* 4ek2_A* Back     alignment and structure
>1k44_A Nucleoside diphosphate kinase; nucleoside triphosphate, transferase; 2.60A {Mycobacterium tuberculosis} SCOP: d.58.6.1 Back     alignment and structure
>3mpd_A Nucleoside diphosphate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, encepha cuniculi, structural genomics; 2.08A {Encephalitozoon cuniculi} SCOP: d.58.6.0 Back     alignment and structure
>3evo_A NDP kinase, NDK, nucleoside diphosphate kinase; phosphotransferase nucleotide binding, ATP-binding, magnesium, metal-binding; HET: TYD; 1.50A {Acanthamoeba polyphaga mimivirus} SCOP: d.58.6.1 PDB: 3ejm_A* 3emt_A* 3em1_A* 3fc9_A* 3g2x_A* 3ena_A* 3dkd_A* 3ddi_A* 3etm_A* 3evm_A* 3fcv_A* 3b6b_A* 2b8p_A* 3gp9_A* 2b8q_A* 3ee3_A* 3elh_A* 3eic_A* 3evw_A* 3gpa_A* ... Back     alignment and structure
>3ztp_A Nucleoside diphosphate kinase; transferase; HET: GOL; 1.37A {Aquifex aeolicus} PDB: 3zto_A* 3ztq_A 3ztr_A 3zts_A Back     alignment and structure
>1wkj_A Nucleoside diphosphate kinase; thermus thermophilus HB8, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.00A {Thermus thermophilus} SCOP: d.58.6.1 PDB: 1wkk_A* 1wkl_A* Back     alignment and structure
>2hur_A NDK, nucleoside diphosphate kinase, NDP kinase; type II tetramer, signaling protein,transferase; 1.62A {Escherichia coli} Back     alignment and structure
>1nhk_R Nucleoside diphosphate kinase; phosphotransferase; HET: CMP; 1.90A {Myxococcus xanthus} SCOP: d.58.6.1 PDB: 1nlk_R* 2nck_R 3pj9_A Back     alignment and structure
>4fkx_A NDK B, nucleoside diphosphate kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CDP; 1.70A {Trypanosoma brucei brucei} PDB: 4fky_A* 4f4a_A* 4f36_A* 3prv_A 3ngs_A 3ngr_A 3ngt_A* 3ngu_A* Back     alignment and structure
>3js9_A Nucleoside diphosphate kinase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, babesiosis; 2.50A {Babesia bovis} SCOP: d.58.6.0 Back     alignment and structure
>3fkb_A NDP kinase, NDK, nucleoside diphosphate kinase, cytosolic; AN hexamer structure, ATP-binding, magnesium, metal- nucleotide metabolism; HET: TNM TNV; 1.65A {Dictyostelium discoideum} SCOP: d.58.6.1 PDB: 1b4s_A* 1mn9_A* 1f3f_A* 1hlw_A 1ndk_A 1pae_X 1f6t_A* 1bux_A* 1b99_A* 1hiy_A* 1kdn_A* 1ndc_A* 1ndp_A* 1nsp_A* 1s5z_A* 2bef_A* 1mn7_A* 1hhq_A 1lwx_A* 1npk_A ... Back     alignment and structure
>2vu5_A Nucleoside diphosphate kinase; nucleotide-binding, ATP-binding, metal-binding, phosphoprotein, nucleotide metabolism, cytoplasm, magnesium; 2.0A {Bacillus anthracis} Back     alignment and structure
>3q8u_A Nucleoside diphosphate kinase; ferridoxin fold, alpha-beta protein family; HET: ADP; 2.22A {Staphylococcus aureus subsp} PDB: 3q83_A* 3q89_A* 3q86_A* 3q8v_A* 3q8y_A* Back     alignment and structure
>1s57_A Nucleoside diphosphate kinase II; transferase; HET: EPE; 1.80A {Arabidopsis thaliana} SCOP: d.58.6.1 PDB: 1s59_A* Back     alignment and structure
>1pku_A Nucleoside diphosphate kinase I; RICE, transferase; 2.50A {Oryza sativa} SCOP: d.58.6.1 Back     alignment and structure
>1u8w_A Nucleoside diphosphate kinase I; nucleotide diphosphate, transferase; 2.40A {Arabidopsis thaliana} SCOP: d.58.6.1 Back     alignment and structure
>2az3_A Nucleoside diphosphate kinase; halophilic, transferase; HET: CDP; 2.20A {Halobacterium salinarum} SCOP: d.58.6.1 PDB: 2az1_A 2zua_A Back     alignment and structure
>3bbb_A Nucleoside diphosphate kinase B; transcription factor, cancer, NM23 GEN, hexamer, activator, oncogene, ATP-binding, cell cycle, DNA-binding; HET: DG DA; 1.30A {Homo sapiens} SCOP: d.58.6.1 PDB: 1nue_A* 3bbf_A* 1nsk_R 3bbc_A 1be4_A* 1bhn_A* 2hvd_A* 1jxv_A* 2hve_A* 1ucn_A* 1nsq_A* 1ndl_A* Back     alignment and structure
>1xiq_A Nucleoside diphosphate kinase B; protein structure initiative, structural genomics, SGPP; 3.05A {Plasmodium falciparum} SCOP: d.58.6.1 Back     alignment and structure
>2dxe_A Nucleoside diphosphate kinase; nucleoside binding, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: GDP; 1.70A {Pyrococcus horikoshii} SCOP: d.58.6.1 PDB: 2dxd_A* 2cwk_A* 2dxf_A* 2dy9_A* 2dya_A* Back     alignment and structure
>1ehw_A NDPK H4, nucleoside diphosphate kinase; NM23, mitochondrial, killer-O transferase; 2.40A {Homo sapiens} SCOP: d.58.6.1 Back     alignment and structure
>1nb2_A Nucleoside diphosphate kinase; bacillus halodenitrifians, transferase; 2.20A {Virgibacillus halodenitrificans} SCOP: d.58.6.1 Back     alignment and structure
>1zs6_A Nucleoside diphosphate kinase 3; nucleotide metabolism, apoptosis, transferase, struc genomics, structural genomics consortium, SGC; HET: ADP; 2.30A {Homo sapiens} SCOP: d.58.6.1 Back     alignment and structure
>3l7u_A Nucleoside diphosphate kinase A; ATP-binding, nucleotide-binding, transferase, tumor suppressor; 2.10A {Homo sapiens} Back     alignment and structure
>3b54_A NDK, NDP kinase, nucleoside diphosphate kinase; alpha/beta sandwich, ATP-binding, magnesium, metal-B mitochondrion; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>1w7w_A Nucleoside diphosphate kinase; NDPK3, transferase; 2.80A {Pisum sativum} SCOP: d.58.6.1 Back     alignment and structure
>3r9l_A Nucleoside diphosphate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, giardiasis; 2.65A {Giardia lamblia} SCOP: d.58.6.1 Back     alignment and structure
>4dz6_A Nucleoside diphosphate kinase; ssgcid, niaid, vanada transition state mimic, transition state analog, transferas; HET: ADP; 2.20A {Borrelia burgdorferi} PDB: 4di6_A* Back     alignment and structure
>1xqi_A Nucleoside diphosphate kinase; alpha/beta sandwich, ferredoxin fold, transferase; HET: PGE; 2.50A {Pyrobaculum aerophilum} SCOP: d.58.6.1 Back     alignment and structure
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A Back     alignment and structure
>1wr1_B Ubiquitin-like protein DSK2; UBA domain, UBA-ubiquitin complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 Back     alignment and structure
>2jy5_A Ubiquilin-1; UBA, alternative splicing, cytoplasm, nucleus, phosphoprotein, proteasome, signaling protein; NMR {Homo sapiens} PDB: 2jy6_B Back     alignment and structure
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus} Back     alignment and structure
>2bwb_A Ubiquitin-like protein DSK2; UBA, signaling protein; 2.3A {Saccharomyces cerevisiae} SCOP: a.5.2.1 PDB: 2bwe_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 179
d2dyaa1153 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, 2e-19
d3bbba1150 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, 4e-19
d1xqia1182 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, 6e-19
d1xqia1182 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, 6e-06
d1hlwa_150 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 9e-19
d1s57a_153 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 1e-18
d1nb2a_149 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 1e-18
d1xiqa_149 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 3e-18
d1zs6a1152 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, 3e-18
d1zs6a1152 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, 3e-04
d1k44a_135 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 4e-18
d1w7wa_151 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 4e-18
d1nhkl_143 d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK { 9e-18
d1nhkl_143 d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK { 0.001
d1wkja1137 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, 1e-17
d1wkja1137 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, 0.003
d2az3a1152 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, 2e-17
d1u8wa_149 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 5e-17
d1ehwa_143 d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK { 1e-16
d2b8qa1128 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, 1e-15
>d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 153 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
 Score = 78.2 bits (192), Expect = 2e-19
 Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 9/105 (8%)

Query: 21  KERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVS--FCVSFLEK-------KS 71
            ERT ++IKPD V RGL+G II RFE KG K+V MK +W+         E+       K+
Sbjct: 2   TERTLVIIKPDAVVRGLIGEIISRFEKKGLKIVGMKMIWIDRELAEKHYEEHREKPFFKA 61

Query: 72  ACCRMVSSVPAYEISGKLLVGITYSTVLGHLNLETSECPLFHIDY 116
               +  +     +            + G  + + +       D+
Sbjct: 62  LIDYITKTPVVVMVLEGRYAVEVVRKMAGATDPKDAAPGTIRGDF 106


>d3bbba1 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens) [TaxId: 9606]} Length = 150 Back     information, alignment and structure
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 182 Back     information, alignment and structure
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 182 Back     information, alignment and structure
>d1hlwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Dictyostelium discoideum [TaxId: 44689]} Length = 150 Back     information, alignment and structure
>d1s57a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId: 3702]} Length = 153 Back     information, alignment and structure
>d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]} Length = 149 Back     information, alignment and structure
>d1xiqa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Length = 149 Back     information, alignment and structure
>d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]} Length = 152 Back     information, alignment and structure
>d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]} Length = 152 Back     information, alignment and structure
>d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Mycobacterium tuberculosis [TaxId: 1773]} Length = 135 Back     information, alignment and structure
>d1w7wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Pea (Pisum sativum) [TaxId: 3888]} Length = 151 Back     information, alignment and structure
>d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]} Length = 143 Back     information, alignment and structure
>d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]} Length = 143 Back     information, alignment and structure
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]} Length = 137 Back     information, alignment and structure
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]} Length = 137 Back     information, alignment and structure
>d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]} Length = 152 Back     information, alignment and structure
>d1u8wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 149 Back     information, alignment and structure
>d1ehwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens), NDK4 [TaxId: 9606]} Length = 143 Back     information, alignment and structure
>d2b8qa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]} Length = 128 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query179
d1xqia1182 Nucleoside diphosphate kinase, NDK {Archaeon Pyrob 99.97
d1zs6a1152 Nucleoside diphosphate kinase, NDK {Human(Homo sap 99.97
d3bbba1150 Nucleoside diphosphate kinase, NDK {Human (Homo sa 99.97
d1nb2a_149 Nucleoside diphosphate kinase, NDK {Bacillus halod 99.97
d1s57a_153 Nucleoside diphosphate kinase, NDK {Thale cress (A 99.97
d1ehwa_143 Nucleoside diphosphate kinase, NDK {Human (Homo sa 99.97
d1w7wa_151 Nucleoside diphosphate kinase, NDK {Pea (Pisum sat 99.97
d1hlwa_150 Nucleoside diphosphate kinase, NDK {Dictyostelium 99.97
d1xiqa_149 Nucleoside diphosphate kinase, NDK {Plasmodium fal 99.97
d2az3a1152 Nucleoside diphosphate kinase, NDK {Archaeon Halob 99.97
d1u8wa_149 Nucleoside diphosphate kinase, NDK {Thale cress (A 99.97
d1nhkl_143 Nucleoside diphosphate kinase, NDK {Myxococcus xan 99.97
d1wkja1137 Nucleoside diphosphate kinase, NDK {Thermus thermo 99.97
d2dyaa1153 Nucleoside diphosphate kinase, NDK {Archaeon Pyroc 99.96
d1k44a_135 Nucleoside diphosphate kinase, NDK {Mycobacterium 99.96
d2b8qa1128 Nucleoside diphosphate kinase, NDK {Mimivirus [Tax 99.94
d1ehwa_143 Nucleoside diphosphate kinase, NDK {Human (Homo sa 99.34
d1k44a_135 Nucleoside diphosphate kinase, NDK {Mycobacterium 99.33
d1s57a_153 Nucleoside diphosphate kinase, NDK {Thale cress (A 99.33
d1wkja1137 Nucleoside diphosphate kinase, NDK {Thermus thermo 99.32
d1nhkl_143 Nucleoside diphosphate kinase, NDK {Myxococcus xan 99.32
d1zs6a1152 Nucleoside diphosphate kinase, NDK {Human(Homo sap 99.32
d2az3a1152 Nucleoside diphosphate kinase, NDK {Archaeon Halob 99.31
d1xiqa_149 Nucleoside diphosphate kinase, NDK {Plasmodium fal 99.31
d1w7wa_151 Nucleoside diphosphate kinase, NDK {Pea (Pisum sat 99.3
d1hlwa_150 Nucleoside diphosphate kinase, NDK {Dictyostelium 99.3
d2dyaa1153 Nucleoside diphosphate kinase, NDK {Archaeon Pyroc 99.3
d3bbba1150 Nucleoside diphosphate kinase, NDK {Human (Homo sa 99.3
d1u8wa_149 Nucleoside diphosphate kinase, NDK {Thale cress (A 99.29
d1nb2a_149 Nucleoside diphosphate kinase, NDK {Bacillus halod 99.28
d2b8qa1128 Nucleoside diphosphate kinase, NDK {Mimivirus [Tax 99.28
d1xqia1182 Nucleoside diphosphate kinase, NDK {Archaeon Pyrob 99.17
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Nucleoside diphosphate kinase, NDK
family: Nucleoside diphosphate kinase, NDK
domain: Nucleoside diphosphate kinase, NDK
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=99.97  E-value=6.5e-34  Score=231.32  Aligned_cols=99  Identities=29%  Similarity=0.416  Sum_probs=93.4

Q ss_pred             ccceEEEEEcCccccCCchHHHHHHHHHcCcEEEEeehhhhhhhh---hhhhhhh-------------------------
Q psy3715          20 PKERTFLMIKPDGVQRGLVGNIIKRFEDKGFKLVAMKFVWVSFCV---SFLEKKS-------------------------   71 (179)
Q Consensus        20 ~~erTl~~IKPD~~~~g~~g~Ii~~~~~~G~kiv~~K~~~~s~~~---hY~ehkd-------------------------   71 (179)
                      |.||||++|||||++++++|+||++|+.+||+|+++|+.+++.++   ||.+|++                         
T Consensus         1 p~ErTl~iIKPDav~~~lvg~Ii~~ie~~Gf~Iva~k~~~lt~e~a~~fY~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (182)
T d1xqia1           1 PVEKTLLILKPDAVARGLVDEIISRFKKAGLKIVALKMVKASPEEIERFYPSSEEWLQSAGQKLLKAYQELGIDPRAKIG   80 (182)
T ss_dssp             CCCEEEEEECHHHHHTTCHHHHHHHHHHHTCEEEEEEEECCCHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCCHHHHHS
T ss_pred             CCceEEEEECcchhccCCHHHHHHHHHHCCCEEEEEeeecCCHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccccccc
Confidence            689999999999999999999999999999999999998888877   9999874                         


Q ss_pred             --------ccCCCCCCchhhhhhCceE--------EEeeehhhccCCCCCCCCCCceeeeccccc
Q psy3715          72 --------ACCRMVSSVPAYEISGKLL--------VGITYSTVLGHLNLETSECPLFHIDYELFP  120 (179)
Q Consensus        72 --------k~~~Ff~~l~~~m~sgPvl--------aV~~~R~mlG~TnP~~A~pGTIRgdF~~~~  120 (179)
                              |  |||++|++||+|||++        ||++||.|+|||||.+|.||||||+|+.+.
T Consensus        81 ~~~~~~~gk--~f~~~Lv~~mtSgPvva~vleg~~aV~~~R~l~GptdP~~A~pgtIR~~fg~d~  143 (182)
T d1xqia1          81 TDDPVEVGR--IIKRNLVKYMTSGPNVVMVLKGNRAVEIVRKLVGPTSPHSAPPGTIRGDYSIDS  143 (182)
T ss_dssp             CCCHHHHHH--HHHHHHHHHHTSSCEEEEEEESTTHHHHHHHHHCCSCGGGSCTTSHHHHHCCCC
T ss_pred             cccccccCC--cchHHHHHHHhcCceEEEEecccCHHHHHHHHhCCCCcccCCCCccHHhhCcCc
Confidence                    5  8999999999999999        899999999999999999999999998754



>d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]} Back     information, alignment and structure
>d3bbba1 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]} Back     information, alignment and structure
>d1s57a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId: 3702]} Back     information, alignment and structure
>d1ehwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens), NDK4 [TaxId: 9606]} Back     information, alignment and structure
>d1w7wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1hlwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1xiqa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]} Back     information, alignment and structure
>d1u8wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2b8qa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]} Back     information, alignment and structure
>d1ehwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens), NDK4 [TaxId: 9606]} Back     information, alignment and structure
>d1k44a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1s57a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana), chloroplast NDK2 [TaxId: 3702]} Back     information, alignment and structure
>d1wkja1 d.58.6.1 (A:1-137) Nucleoside diphosphate kinase, NDK {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nhkl_ d.58.6.1 (L:) Nucleoside diphosphate kinase, NDK {Myxococcus xanthus [TaxId: 34]} Back     information, alignment and structure
>d1zs6a1 d.58.6.1 (A:18-169) Nucleoside diphosphate kinase, NDK {Human(Homo sapiens), NDK3 [TaxId: 9606]} Back     information, alignment and structure
>d2az3a1 d.58.6.1 (A:4-155) Nucleoside diphosphate kinase, NDK {Archaeon Halobacterium salinarum [TaxId: 2242]} Back     information, alignment and structure
>d1xiqa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} Back     information, alignment and structure
>d1w7wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Pea (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1hlwa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d2dyaa1 d.58.6.1 (A:6-158) Nucleoside diphosphate kinase, NDK {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d3bbba1 d.58.6.1 (A:2-151) Nucleoside diphosphate kinase, NDK {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u8wa_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1nb2a_ d.58.6.1 (A:) Nucleoside diphosphate kinase, NDK {Bacillus halodenitrificans [TaxId: 1482]} Back     information, alignment and structure
>d2b8qa1 d.58.6.1 (A:2-129) Nucleoside diphosphate kinase, NDK {Mimivirus [TaxId: 315393]} Back     information, alignment and structure
>d1xqia1 d.58.6.1 (A:14-195) Nucleoside diphosphate kinase, NDK {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure