Psyllid ID: psy3807

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
ccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHccccHHHHHHHHcHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHccccccHHHHHHHHHHHHHHcccccEEEEEcHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
ccEcEccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHccHHHHHHHHHHHccccccHHHHHccHHHHEcccccccccccHHHHcccccccccccHHEEEEHHHHHHHHHHccccccEccccccHccHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccccccHHHHHcccccHHHHHHHHHHHHHHHHHcccccHHHHHccccHcHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHEEEHHHHHHHHcccccccEEEEcHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
myiseiaplnlrgglgtvNQLAVTLGLLISqilgiepilgtdegwpvlldsresdlhrselenytflpFSVMLAVFWLFTykkvpetknkTFEEIVALFrtddgltfHLTYTILSAMLGMFQfgyntgvinapeKVTMLGMFqfgyntgvinapeKNIEKFFKDVYkernlvdmtdeKAKIFYSVAVSIFAIGgmlggfsggsiadkfgrgglgtVNQLAVTLGLLISqilgiepilgtdegWPVLLAMLGMFQfgyntgvinapekVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTalfessglsektakfttIGIGAVMVTMTIISIplmdrmgrrtlhlyglggMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFavgpgsipwMITAELfsqgprpaAMSIAVLVNWIANFVVglgfptlnlpyral
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKkvpetknkTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAqqseskisMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLgfptlnlpyral
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIfaiggmlggfsggsiaDKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMfifsifitislliKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
****EIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIE******************ELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPY***
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIE********************LCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
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MYISEIAPLNLRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLDSRESDLHRSELENYTFLPFSVMLAVFWLFTYKKVPETKNKTFEEIVALFRTDDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRAL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query483 2.2.26 [Sep-21-2011]
Q8IRI6600 Glucose transporter type no N/A 0.399 0.321 0.677 3e-71
P14142509 Solute carrier family 2, yes N/A 0.679 0.644 0.371 6e-69
Q27994509 Solute carrier family 2, yes N/A 0.679 0.644 0.381 6e-69
P14672509 Solute carrier family 2, yes N/A 0.679 0.644 0.364 3e-68
P47842495 Solute carrier family 2, no N/A 0.687 0.670 0.371 3e-68
P19357509 Solute carrier family 2, yes N/A 0.679 0.644 0.369 4e-68
P46896490 Solute carrier family 2, yes N/A 0.679 0.669 0.375 1e-67
P47843494 Solute carrier family 2, N/A N/A 0.687 0.672 0.369 2e-67
P58352494 Solute carrier family 2, yes N/A 0.687 0.672 0.371 2e-67
P27674492 Solute carrier family 2, no N/A 0.679 0.666 0.363 8e-67
>sp|Q8IRI6|GTR1_DROME Glucose transporter type 1 OS=Drosophila melanogaster GN=Glut1 PE=2 SV=3 Back     alignment and function desciption
 Score =  269 bits (688), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 141/208 (67%), Positives = 161/208 (77%), Gaps = 15/208 (7%)

Query: 210 RGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAML---GMFQFGYNTGVINAPE 266
           RGGLGTVNQLAVT+GLL+SQ+LGIE ILGT+EGWP+LL +     + Q         +P 
Sbjct: 343 RGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPESPR 402

Query: 267 ------------KVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPL 314
                       +  LR+LRAS  +E DIEEMR E+ AQQSES IS  EL+CS TLR PL
Sbjct: 403 YLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTMELICSPTLRPPL 462

Query: 315 IIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR 374
           IIGIVMQLSQQFSGINAVFYYST+LF SSGL+E++AKF TIGIGA+MV MT++SIPLMDR
Sbjct: 463 IIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDR 522

Query: 375 MGRRTLHLYGLGGMFIFSIFITISLLIK 402
            GRRTLHLYGLGGMFIFSIFITIS LIK
Sbjct: 523 TGRRTLHLYGLGGMFIFSIFITISFLIK 550
Facilitative glucose transporter.
Drosophila melanogaster (taxid: 7227)
>sp|P14142|GTR4_MOUSE Solute carrier family 2, facilitated glucose transporter member 4 OS=Mus musculus GN=Slc2a4 PE=1 SV=3 Back     alignment and function description
>sp|Q27994|GTR4_BOVIN Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2 Back     alignment and function description
>sp|P14672|GTR4_HUMAN Solute carrier family 2, facilitated glucose transporter member 4 OS=Homo sapiens GN=SLC2A4 PE=1 SV=1 Back     alignment and function description
>sp|P47842|GTR3_CANFA Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1 Back     alignment and function description
>sp|P19357|GTR4_RAT Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1 Back     alignment and function description
>sp|P46896|GTR1_CHICK Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1 Back     alignment and function description
>sp|P47843|GTR3_SHEEP Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1 Back     alignment and function description
>sp|P58352|GTR3_BOVIN Solute carrier family 2, facilitated glucose transporter member 3 OS=Bos taurus GN=SLC2A3 PE=2 SV=1 Back     alignment and function description
>sp|P27674|GTR1_BOVIN Solute carrier family 2, facilitated glucose transporter member 1 OS=Bos taurus GN=SLC2A1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
332021553 674 Glucose transporter type 1 [Acromyrmex e 0.734 0.526 0.566 1e-130
307196091 730 Glucose transporter type 1 [Harpegnathos 0.734 0.486 0.566 1e-130
380018001 614 PREDICTED: glucose transporter type 1-li 0.720 0.566 0.566 1e-125
195490254 781 GE21113 [Drosophila yakuba] gi|194179162 0.554 0.343 0.724 1e-112
442629307 802 glucose transporter 1, isoform R [Drosop 0.554 0.334 0.724 1e-112
194864719 801 GG14750 [Drosophila erecta] gi|190652856 0.554 0.334 0.724 1e-112
195336445 805 GM14369 [Drosophila sechellia] gi|194127 0.554 0.332 0.724 1e-112
195586811 751 GD13586 [Drosophila simulans] gi|1941951 0.554 0.356 0.724 1e-112
386770315 602 glucose transporter 1, isoform L [Drosop 0.554 0.445 0.724 1e-112
442629301571 glucose transporter 1, isoform O [Drosop 0.554 0.469 0.724 1e-111
>gi|332021553|gb|EGI61918.1| Glucose transporter type 1 [Acromyrmex echinatior] Back     alignment and taxonomy information
 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/452 (56%), Positives = 298/452 (65%), Gaps = 97/452 (21%)

Query: 102 DDGLTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKF 161
           + GLT  L+Y IL+A+LGM QF                     GYNTGVINAPE NIE F
Sbjct: 168 EQGLTLFLSYAILAAVLGMLQF---------------------GYNTGVINAPEVNIENF 206

Query: 162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFA------------------------------ 191
            KDVYK+R   D++D+  K  YSVAVSIFA                              
Sbjct: 207 MKDVYKDRYGEDISDDSVKTLYSVAVSIFAIGGMVGGFSGGTIANRFGRKGGLLLNNVLG 266

Query: 192 -IGGMLGGFSG------------------------------GSIADKFGRGGLGTVNQLA 220
            +G  L GF+                                 IA    RGGLGTVNQLA
Sbjct: 267 IVGACLMGFTKLAESYEMLFFGRFIIGVNCGLNTSLVPMYISEIAPLNLRGGLGTVNQLA 326

Query: 221 VTLGLLISQILGIEPILGTDEGWPVLL------AMLGMF---------QFGYNTGVINAP 265
           VT+GLL+SQ+LGIE ILGT+EGWPVLL      A+L +          ++   T      
Sbjct: 327 VTVGLLVSQVLGIEQILGTNEGWPVLLGLAICPAILQLLLLPVCPESPRYLLITKQWEEE 386

Query: 266 EKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQ 325
            +  LR+LRAS Q+E DIEEMR E+ AQQ+ES ISM+EL+CS TLR PL+IG+VMQLSQQ
Sbjct: 387 ARKALRRLRASNQVEEDIEEMRAEERAQQAESTISMTELICSPTLRAPLVIGVVMQLSQQ 446

Query: 326 FSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGL 385
            SGINAVFYYST LF SSGL++++AKF TIGIGA+MV MT++SIPLMDR GRRTLHLYGL
Sbjct: 447 LSGINAVFYYSTNLFTSSGLTDESAKFATIGIGAIMVCMTLVSIPLMDRTGRRTLHLYGL 506

Query: 386 GGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGPGSIPWMITAEL 445
           GGMFIFSIFITIS LIKEFFG+VQEMIDWMSY+SV+S L FVVFFAVGPGSIPWMITAEL
Sbjct: 507 GGMFIFSIFITISFLIKEFFGYVQEMIDWMSYISVVSTLCFVVFFAVGPGSIPWMITAEL 566

Query: 446 FSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477
           FSQGPRPAAMSIAVLVNW+ANF+VG+GFP++ 
Sbjct: 567 FSQGPRPAAMSIAVLVNWMANFLVGIGFPSMK 598

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|307196091|gb|EFN77800.1| Glucose transporter type 1 [Harpegnathos saltator] Back     alignment and taxonomy information
>gi|380018001|ref|XP_003692929.1| PREDICTED: glucose transporter type 1-like [Apis florea] Back     alignment and taxonomy information
>gi|195490254|ref|XP_002093061.1| GE21113 [Drosophila yakuba] gi|194179162|gb|EDW92773.1| GE21113 [Drosophila yakuba] Back     alignment and taxonomy information
>gi|442629307|ref|NP_001261233.1| glucose transporter 1, isoform R [Drosophila melanogaster] gi|440215099|gb|AGB93928.1| glucose transporter 1, isoform R [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|194864719|ref|XP_001971073.1| GG14750 [Drosophila erecta] gi|190652856|gb|EDV50099.1| GG14750 [Drosophila erecta] Back     alignment and taxonomy information
>gi|195336445|ref|XP_002034846.1| GM14369 [Drosophila sechellia] gi|194127939|gb|EDW49982.1| GM14369 [Drosophila sechellia] Back     alignment and taxonomy information
>gi|195586811|ref|XP_002083161.1| GD13586 [Drosophila simulans] gi|194195170|gb|EDX08746.1| GD13586 [Drosophila simulans] Back     alignment and taxonomy information
>gi|386770315|ref|NP_001097469.2| glucose transporter 1, isoform L [Drosophila melanogaster] gi|383291658|gb|ABW08434.2| glucose transporter 1, isoform L [Drosophila melanogaster] Back     alignment and taxonomy information
>gi|442629301|ref|NP_001261232.1| glucose transporter 1, isoform O [Drosophila melanogaster] gi|440215096|gb|AGB93927.1| glucose transporter 1, isoform O [Drosophila melanogaster] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query483
FB|FBgn0264574600 Glut1 "Glucose transporter 1" 0.370 0.298 0.664 3.3e-71
UNIPROTKB|P27674492 SLC2A1 "Solute carrier family 0.527 0.518 0.433 1.1e-66
UNIPROTKB|P28568496 SLC2A3 "Solute carrier family 0.525 0.512 0.435 1.4e-66
UNIPROTKB|F1NTJ1475 SLC2A3 "Solute carrier family 0.525 0.534 0.435 1.4e-66
UNIPROTKB|F1NIN0443 SLC2A3 "Solute carrier family 0.525 0.573 0.435 1.4e-66
UNIPROTKB|F1NF68489 SLC2A1 "Solute carrier family 0.527 0.521 0.448 2.3e-66
UNIPROTKB|P11166492 SLC2A1 "Solute carrier family 0.527 0.518 0.430 4.8e-66
RGD|3704492 Slc2a1 "solute carrier family 0.527 0.518 0.430 4.8e-66
MGI|MGI:95755492 Slc2a1 "solute carrier family 0.527 0.518 0.430 6.1e-66
UNIPROTKB|P46896490 SLC2A1 "Solute carrier family 0.527 0.520 0.448 7.7e-66
FB|FBgn0264574 Glut1 "Glucose transporter 1" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 596 (214.9 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
 Identities = 129/194 (66%), Positives = 150/194 (77%)

Query:   210 RGGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLL------AMLGMF---------Q 254
             RGGLGTVNQLAVT+GLL+SQ+LGIE ILGT+EGWP+LL      A+L +          +
Sbjct:   343 RGGLGTVNQLAVTVGLLLSQVLGIEQILGTNEGWPILLGLAICPAILQLILLPVCPESPR 402

Query:   255 FGYNTGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPL 314
             +   T       +  LR+LRAS  +E DIEEMR E+ AQQSES IS  EL+CS TLR PL
Sbjct:   403 YLLITKQWEEEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTMELICSPTLRPPL 462

Query:   315 IIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR 374
             IIGIVMQLSQQFSGINAVFYYST+LF SSGL+E++AKF TIGIGA+MV MT++SIPLMDR
Sbjct:   463 IIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDR 522

Query:   375 MGRRTLHLYGLGGM 388
              GRRTLHLYGLGGM
Sbjct:   523 TGRRTLHLYGLGGM 536
GO:0005355 "glucose transmembrane transporter activity" evidence=ISS;NAS
GO:0016021 "integral to membrane" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
UNIPROTKB|P27674 SLC2A1 "Solute carrier family 2, facilitated glucose transporter member 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|P28568 SLC2A3 "Solute carrier family 2, facilitated glucose transporter member 3" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NTJ1 SLC2A3 "Solute carrier family 2, facilitated glucose transporter member 3" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NIN0 SLC2A3 "Solute carrier family 2, facilitated glucose transporter member 3" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1NF68 SLC2A1 "Solute carrier family 2, facilitated glucose transporter member 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|P11166 SLC2A1 "Solute carrier family 2, facilitated glucose transporter member 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
RGD|3704 Slc2a1 "solute carrier family 2 (facilitated glucose transporter), member 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:95755 Slc2a1 "solute carrier family 2 (facilitated glucose transporter), member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|P46896 SLC2A1 "Solute carrier family 2, facilitated glucose transporter member 1" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P14672GTR4_HUMANNo assigned EC number0.36450.67900.6444yesN/A
Q27994GTR4_BOVINNo assigned EC number0.38120.67900.6444yesN/A
P46896GTR1_CHICKNo assigned EC number0.37530.67900.6693yesN/A
P58352GTR3_BOVINNo assigned EC number0.37170.68730.6720yesN/A
P19357GTR4_RATNo assigned EC number0.36930.67900.6444yesN/A
P14142GTR4_MOUSENo assigned EC number0.37170.67900.6444yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 1e-56
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 7e-49
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 5e-24
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 3e-07
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 2e-06
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 9e-06
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 7e-04
PRK10077 479 PRK10077, xylE, D-xylose transporter XylE; Provisi 0.001
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information 
 Score =  194 bits (495), Expect = 1e-56
 Identities = 122/416 (29%), Positives = 185/416 (44%), Gaps = 87/416 (20%)

Query: 136 VTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKA---------------- 179
           V  LG F FGY+TGVI A    I+ F +                                
Sbjct: 4   VAALGGFLFGYDTGVIGAFLTLIKFFKRFGALTSIGACAASTVLSGLIVSIFSVGCLIGS 63

Query: 180 ------------KIFYSVAVSIFAIGGMLGGFSGGS------------------------ 203
                       K    +   +F IG +L GF+ G                         
Sbjct: 64  LFAGKLGDRFGRKKSLLIGNVLFVIGALLQGFAKGKSFYMLIVGRVIVGLGVGGISVLVP 123

Query: 204 -----IADKFGRGGLGTVNQLAVTLGLLISQILGIEPILGTDE-GWPVLLAM---LGMFQ 254
                IA K  RG LG++ QL +T G+L++ I+G+     ++  GW + L +     +  
Sbjct: 124 MYISEIAPKKLRGALGSLYQLGITFGILVAAIIGLGLNKYSNSDGWRIPLGLQFVPAILL 183

Query: 255 FGYNTGVINAPE--------------KVTLRKLRASTQIEVDIEEMRVEQIAQQSESKIS 300
                G++  PE              +  L KLR  + ++ +I+E +          K S
Sbjct: 184 LI---GLLFLPESPRWLVLKGKLEEARAVLAKLRGVSDVDQEIQEEKDSLERSVEAEKAS 240

Query: 301 MSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAV 360
             EL    T+R+ L++G+++Q+ QQ +GINA+FYYS  +FE+ GLS+      TI +G V
Sbjct: 241 WLELFRGKTVRQRLLMGVMLQIFQQLTGINAIFYYSPTIFETLGLSDSLL--VTIIVGVV 298

Query: 361 MVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMIDWMSYLSV 420
               T I+I L+DR GRR L L G  GM I  + + ++LL                 +++
Sbjct: 299 NFVFTFIAIFLVDRFGRRPLLLLGAAGMAICFLVLGVALLGVA-------KSKGAGIVAI 351

Query: 421 ISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTL 476
           + IL F+ FFA+G G +PW+I +ELF  G RP AM+IA   NW+ANF++G  FP +
Sbjct: 352 VFILLFIAFFALGWGPVPWVIVSELFPLGVRPKAMAIATAANWLANFLIGFLFPII 407

Length = 449
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 483
KOG0569|consensus485 100.0
KOG0254|consensus513 99.95
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.92
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.91
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.91
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.9
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.89
KOG0253|consensus528 99.89
KOG0252|consensus538 99.86
PRK12307426 putative sialic acid transporter; Provisional 99.84
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.83
PRK10642490 proline/glycine betaine transporter; Provisional 99.83
TIGR00891405 2A0112 putative sialic acid transporter. 99.83
TIGR00898505 2A0119 cation transport protein. 99.82
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.81
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.8
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 99.8
PRK11663434 regulatory protein UhpC; Provisional 99.79
PRK09952438 shikimate transporter; Provisional 99.78
TIGR00893399 2A0114 d-galactonate transporter. 99.78
PRK15075434 citrate-proton symporter; Provisional 99.77
TIGR00895398 2A0115 benzoate transport. 99.77
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 99.77
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.76
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.76
PRK03893496 putative sialic acid transporter; Provisional 99.74
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.73
PRK14995495 methyl viologen resistance protein SmvA; Provision 99.72
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.72
TIGR00900365 2A0121 H+ Antiporter protein. 99.72
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.72
PRK03545390 putative arabinose transporter; Provisional 99.71
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.7
PRK09705393 cynX putative cyanate transporter; Provisional 99.69
KOG0569|consensus485 99.68
TIGR00896355 CynX cyanate transporter. This family of proteins 99.68
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.68
TIGR00897402 2A0118 polyol permease family. This family of prot 99.67
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.66
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 99.65
PRK10504471 putative transporter; Provisional 99.65
PRK09528420 lacY galactoside permease; Reviewed 99.65
PRK05122399 major facilitator superfamily transporter; Provisi 99.64
PRK10489417 enterobactin exporter EntS; Provisional 99.64
KOG0255|consensus521 99.63
PRK03699394 putative transporter; Provisional 99.63
PRK12382392 putative transporter; Provisional 99.63
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.62
PRK10213394 nepI ribonucleoside transporter; Reviewed 99.62
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.61
PRK03633381 putative MFS family transporter protein; Provision 99.61
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.61
PLN00028476 nitrate transmembrane transporter; Provisional 99.61
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.61
PRK10091382 MFS transport protein AraJ; Provisional 99.6
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.59
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.59
PRK10054395 putative transporter; Provisional 99.58
PRK11043401 putative transporter; Provisional 99.58
PRK15402406 multidrug efflux system translocase MdfA; Provisio 99.56
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.56
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.56
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.55
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.55
PRK15011393 sugar efflux transporter B; Provisional 99.55
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 99.55
PRK10133438 L-fucose transporter; Provisional 99.55
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.55
PRK09874408 drug efflux system protein MdtG; Provisional 99.53
PRK11646400 multidrug resistance protein MdtH; Provisional 99.53
PRK10642490 proline/glycine betaine transporter; Provisional 99.52
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.52
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.51
KOG0254|consensus513 99.51
KOG2532|consensus466 99.51
TIGR00901356 2A0125 AmpG-related permease. 99.5
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.5
PRK11010 491 ampG muropeptide transporter; Validated 99.49
PRK11652394 emrD multidrug resistance protein D; Provisional 99.48
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.46
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.46
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.43
KOG1330|consensus493 99.41
PRK11902402 ampG muropeptide transporter; Reviewed 99.4
KOG2533|consensus495 99.37
PRK11195393 lysophospholipid transporter LplT; Provisional 99.37
PF13347428 MFS_2: MFS/sugar transport protein 99.36
KOG2532|consensus466 99.35
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.35
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.34
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.32
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 99.31
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 99.31
PRK09669444 putative symporter YagG; Provisional 99.26
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 99.26
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.25
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.25
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.25
PRK09848448 glucuronide transporter; Provisional 99.25
PRK09952438 shikimate transporter; Provisional 99.22
PRK10406432 alpha-ketoglutarate transporter; Provisional 99.22
PRK10429473 melibiose:sodium symporter; Provisional 99.21
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 99.21
PRK15075434 citrate-proton symporter; Provisional 99.18
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.17
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.17
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.13
COG2211467 MelB Na+/melibiose symporter and related transport 99.13
COG2270438 Permeases of the major facilitator superfamily [Ge 99.12
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 99.12
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.12
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.12
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.11
PRK03545390 putative arabinose transporter; Provisional 99.1
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.09
KOG2504|consensus509 99.08
PRK11462460 putative transporter; Provisional 99.07
TIGR01299 742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.06
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.06
TIGR00805 633 oat sodium-independent organic anion transporter. 99.05
PRK11010491 ampG muropeptide transporter; Validated 99.03
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.0
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 98.99
KOG2615|consensus451 98.98
TIGR00895 398 2A0115 benzoate transport. 98.97
PRK11663 434 regulatory protein UhpC; Provisional 98.93
KOG2563|consensus480 98.93
PRK10054 395 putative transporter; Provisional 98.92
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 98.92
PRK12307 426 putative sialic acid transporter; Provisional 98.92
TIGR00891 405 2A0112 putative sialic acid transporter. 98.91
PLN00028 476 nitrate transmembrane transporter; Provisional 98.9
PRK11902402 ampG muropeptide transporter; Reviewed 98.9
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 98.9
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.9
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.89
PRK10207 489 dipeptide/tripeptide permease B; Provisional 98.89
KOG4686|consensus459 98.88
PRK10473 392 multidrug efflux system protein MdtL; Provisional 98.87
PRK09584500 tppB putative tripeptide transporter permease; Rev 98.87
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 98.86
PRK05122 399 major facilitator superfamily transporter; Provisi 98.86
PRK03893 496 putative sialic acid transporter; Provisional 98.86
PRK10213 394 nepI ribonucleoside transporter; Reviewed 98.86
PRK10504 471 putative transporter; Provisional 98.86
PRK03699 394 putative transporter; Provisional 98.85
PRK11551 406 putative 3-hydroxyphenylpropionic transporter MhpT 98.83
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 98.81
PRK09874 408 drug efflux system protein MdtG; Provisional 98.8
PRK12382 392 putative transporter; Provisional 98.79
cd06174 352 MFS The Major Facilitator Superfamily (MFS) is a l 98.78
PRK10489 417 enterobactin exporter EntS; Provisional 98.78
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 98.76
TIGR00897 402 2A0118 polyol permease family. This family of prot 98.76
TIGR00893 399 2A0114 d-galactonate transporter. 98.76
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 98.75
PRK15011393 sugar efflux transporter B; Provisional 98.75
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 98.74
TIGR00900 365 2A0121 H+ Antiporter protein. 98.73
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 98.73
KOG3764|consensus464 98.73
PRK09584 500 tppB putative tripeptide transporter permease; Rev 98.73
PRK11646 400 multidrug resistance protein MdtH; Provisional 98.71
PRK11652 394 emrD multidrug resistance protein D; Provisional 98.7
TIGR00901356 2A0125 AmpG-related permease. 98.7
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 98.68
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 98.67
PRK03633 381 putative MFS family transporter protein; Provision 98.67
TIGR01272310 gluP glucose/galactose transporter. Disruption of 98.66
PRK15462493 dipeptide/tripeptide permease D; Provisional 98.66
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 98.66
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 98.65
PRK15403 413 multidrug efflux system protein MdtM; Provisional 98.65
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 98.65
TIGR00892 455 2A0113 monocarboxylate transporter 1. 98.64
PRK11195 393 lysophospholipid transporter LplT; Provisional 98.64
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 98.63
PRK14995 495 methyl viologen resistance protein SmvA; Provision 98.63
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 98.61
PRK10091 382 MFS transport protein AraJ; Provisional 98.6
PRK10133 438 L-fucose transporter; Provisional 98.6
PTZ00207591 hypothetical protein; Provisional 98.6
PRK11043 401 putative transporter; Provisional 98.59
PRK09705 393 cynX putative cyanate transporter; Provisional 98.57
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 98.56
TIGR00879 481 SP MFS transporter, sugar porter (SP) family. This 98.55
TIGR00890 377 2A0111 Oxalate/Formate Antiporter. 98.51
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 98.5
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 98.5
KOG2615|consensus 451 98.45
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 98.44
TIGR00880141 2_A_01_02 Multidrug resistance protein. 98.44
TIGR00896 355 CynX cyanate transporter. This family of proteins 98.42
PF05977 524 MFS_3: Transmembrane secretion effector; InterPro: 98.41
TIGR00899 375 2A0120 sugar efflux transporter. This family of pr 98.38
TIGR00898 505 2A0119 cation transport protein. 98.38
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 98.37
KOG0253|consensus528 98.34
PRK09528 420 lacY galactoside permease; Reviewed 98.34
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.33
TIGR00805 633 oat sodium-independent organic anion transporter. 98.32
PTZ00207 591 hypothetical protein; Provisional 98.27
KOG0255|consensus 521 98.27
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 98.2
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.17
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.16
KOG2533|consensus495 98.16
TIGR00882 396 2A0105 oligosaccharide:H+ symporter. 98.06
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 98.03
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.01
KOG0252|consensus 538 98.0
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 97.96
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 97.94
KOG1330|consensus 493 97.91
TIGR00792 437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 97.89
KOG3626|consensus 735 97.86
TIGR00902 382 2A0127 phenyl proprionate permease family protein. 97.86
PF1283277 MFS_1_like: MFS_1 like family 97.8
PF13347428 MFS_2: MFS/sugar transport protein 97.75
KOG2504|consensus 509 97.73
KOG3764|consensus 464 97.72
PRK10429 473 melibiose:sodium symporter; Provisional 97.69
PRK11128 382 putative 3-phenylpropionic acid transporter; Provi 97.67
KOG2816|consensus463 97.64
PRK09669 444 putative symporter YagG; Provisional 97.63
PRK11462 460 putative transporter; Provisional 97.43
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 97.4
KOG3762|consensus618 97.36
TIGR00889 418 2A0110 nucleoside transporter. This family of prot 97.31
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 97.28
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 97.23
COG2211 467 MelB Na+/melibiose symporter and related transport 97.0
TIGR00788 468 fbt folate/biopterin transporter. The only functio 96.94
PF03825 400 Nuc_H_symport: Nucleoside H+ symporter 96.9
KOG2325|consensus 488 96.87
PF01306 412 LacY_symp: LacY proton/sugar symporter; InterPro: 96.85
KOG2563|consensus 480 96.84
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 96.84
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 96.8
PRK09848 448 glucuronide transporter; Provisional 96.78
KOG2325|consensus488 96.76
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 96.65
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 96.59
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 96.56
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 96.22
KOG3098|consensus461 96.22
PF03209 403 PUCC: PUCC protein; InterPro: IPR004896 This prote 96.13
KOG2816|consensus 463 95.99
KOG3574|consensus510 95.92
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 95.72
KOG0637|consensus 498 95.46
COG2807 395 CynX Cyanate permease [Inorganic ion transport and 95.24
PF1283277 MFS_1_like: MFS_1 like family 94.86
COG0477 338 ProP Permeases of the major facilitator superfamil 94.82
KOG3626|consensus735 94.61
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 94.61
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 94.33
KOG0637|consensus498 94.12
KOG3762|consensus 618 93.97
KOG4686|consensus459 93.38
PF03092 433 BT1: BT1 family; InterPro: IPR004324 Members of th 92.96
TIGR00880141 2_A_01_02 Multidrug resistance protein. 92.86
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 92.43
COG2270 438 Permeases of the major facilitator superfamily [Ge 90.34
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 89.63
KOG4332|consensus454 88.67
KOG3810|consensus433 87.71
KOG3098|consensus 461 87.48
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 84.4
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 83.47
KOG1237|consensus 571 81.93
>KOG0569|consensus Back     alignment and domain information 
Probab=100.00  E-value=2.8e-39  Score=313.63  Aligned_cols=350  Identities=43%  Similarity=0.769  Sum_probs=311.9

Q ss_pred             chhHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHH
Q psy3807         105 LTFHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYS  184 (483)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (483)
                      .+++.........++.+++||                     +.+++|+....+.+|.++.+.+.+|.+.++.....+++
T Consensus         5 ~t~~L~~~~~~~~~gsf~~Gy---------------------~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS   63 (485)
T KOG0569|consen    5 LTRRLLLAVIVATLGSFQFGY---------------------NIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWS   63 (485)
T ss_pred             ccHHHHHHHHHHHHhchhhhh---------------------hheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHH
Confidence            344555555666666666777                     77788889999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhccccCC------------------------------------------------------
Q psy3807         185 VAVSIFAIGGMLGGFSGGSIADKFGR------------------------------------------------------  210 (483)
Q Consensus       185 ~~~~~~~~~~~ig~~~~g~l~dr~GR------------------------------------------------------  210 (483)
                      .+++++.+|.++|++..++++||+||                                                      
T Consensus        64 ~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E  143 (485)
T KOG0569|consen   64 LIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTE  143 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhh
Confidence            99999999999999999999999999                                                      


Q ss_pred             -------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHHhc---------------cCCChHHHHH
Q psy3807         211 -------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFGYN---------------TGVINAPEKV  268 (483)
Q Consensus       211 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~~~---------------~~~~~~~~~~  268 (483)
                             |.+....+++..+|.+++..++...+.++...|++.+.+..+++++.+               .+++.+||++
T Consensus       144 ~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~  223 (485)
T KOG0569|consen  144 ISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARK  223 (485)
T ss_pred             cChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHH
Confidence                   888889999999999999988887778888899999999877766522               4889999999


Q ss_pred             HHHHHhCCcchHHHHHHHHHHHHHhhcc--cccchhhhhccCCCchHHHHHHHHHHhhhcchHHHHHHhHHHHHhhcCCC
Q psy3807         269 TLRKLRASTQIEVDIEEMRVEQIAQQSE--SKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAVFYYSTALFESSGLS  346 (483)
Q Consensus       269 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s  346 (483)
                      .+++++++++.+++.++..++.++++..  ++.+++|+++++++|+.+.+.+.+.+.+|++|.+.+.+|...++++.|++
T Consensus       224 sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~  303 (485)
T KOG0569|consen  224 ALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFT  303 (485)
T ss_pred             HHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCC
Confidence            9999999988777777666655444433  67789999999999999999999999999999999999999999999999


Q ss_pred             CcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhhh-hhHHHHHHHHHHH
Q psy3807         347 EKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEMI-DWMSYLSVISILG  425 (483)
Q Consensus       347 ~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  425 (483)
                      ..++.+.+...+++.++.++++.+++||+|||++++.+..++.++.+++.......+       .. +|..+..+..++.
T Consensus       304 ~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~y~~i~~~~~  376 (485)
T KOG0569|consen  304 PEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSN-------SFGSWLSYLCIAAIFL  376 (485)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999988887766552       22 5677788999999


Q ss_pred             HHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhhcCC
Q psy3807         426 FVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLPYRA  482 (483)
Q Consensus       426 ~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~g~  482 (483)
                      +...+++|++|++|.+.+|++|++.|+.+.++..++.|+.+++..+.||++.+.+|+
T Consensus       377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~  433 (485)
T KOG0569|consen  377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP  433 (485)
T ss_pred             HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999999999986

>KOG0254|consensus Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>KOG0569|consensus Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>KOG0254|consensus Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG2532|consensus Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>KOG2615|consensus Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG0253|consensus Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG0255|consensus Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2533|consensus Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>KOG0252|consensus Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG1330|consensus Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG2504|consensus Back     alignment and domain information
>KOG3764|consensus Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>KOG2563|consensus Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG2325|consensus Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2816|consensus Back     alignment and domain information
>KOG3574|consensus Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3626|consensus Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>KOG0637|consensus Back     alignment and domain information
>KOG3762|consensus Back     alignment and domain information
>KOG4686|consensus Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG4332|consensus Back     alignment and domain information
>KOG3810|consensus Back     alignment and domain information
>KOG3098|consensus Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG1237|consensus Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query483
4gby_A491 The Structure Of The Mfs (Major Facilitator Superfa 4e-17
>pdb|4GBY|A Chain A, The Structure Of The Mfs (Major Facilitator Superfamily) Proton:xylose Symporter Xyle Bound To D-Xylose Length = 491 Back     alignment and structure 
Iteration: 1

 Score = 86.3 bits (212), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 27/283 (9%)
Query: 210 RGGLGTVNQLAVTLGLLISQIL-------GIEPILGTDEGWPVLLAMLGMFQFGYNTGVI 262
           RG L + NQ A+  G L+   +       G    L TD GW  + A   +    +   + 
Sbjct: 160 RGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTD-GWRYMFASECIPALLFLMLLY 218
Query: 263 NAPEKVTLRKLRAST-QIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPL------- 314
             PE       R    Q E  + ++    +A Q+  +I  S      T  + L       
Sbjct: 219 TVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVI 278
Query: 315 IIGIVMQLSQQFSGINAVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDR 374
           +IG+++ + QQF GIN V YY+  +F++ G S   A   TI +G + +T T+++I  +D+
Sbjct: 279 VIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDK 338
Query: 375 MGRRTLHLYGLGGMXXXXXXXXXXXXXKEFFGFVQEMIDWMSYLSVISILGFVVFFAVGP 434
            GR+ L + G  GM             +               ++++S+L +V  FA+  
Sbjct: 339 FGRKPLQIIGALGMAIGMFSLGTAFYTQA-----------PGIVALLSMLFYVAAFAMSW 387
Query: 435 GSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLN 477
           G + W++ +E+F    R  A++IAV   W+AN+ V   FP ++
Sbjct: 388 GPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMD 430

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.95
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 99.79
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.77
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 99.65
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.59
2cfq_A417 Lactose permease; transport, transport mechanism, 99.58
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.41
2xut_A524 Proton/peptide symporter family protein; transport 99.24
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.03
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 98.88
1pw4_A 451 Glycerol-3-phosphate transporter; transmembrane, i 98.87
2xut_A 524 Proton/peptide symporter family protein; transport 98.85
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 98.84
2cfq_A 417 Lactose permease; transport, transport mechanism, 97.91
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=99.95  E-value=1.1e-26  Score=234.88  Aligned_cols=329  Identities=26%  Similarity=0.434  Sum_probs=225.1

Q ss_pred             hHHHHHHHHHHhhhhhhccccccccCchhhhhhhccccccccceecCchHHHHHHHHHhhhhccCccCChhhhHHHHHHH
Q psy3807         107 FHLTYTILSAMLGMFQFGYNTGVINAPEKVTMLGMFQFGYNTGVINAPEKNIEKFFKDVYKERNLVDMTDEKAKIFYSVA  186 (483)
Q Consensus       107 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (483)
                      +........++++.+++||                     |.++++.+.+.+...+.    ..  .+.++...+...+++
T Consensus         8 ~y~~~i~~~a~lg~~~~Gy---------------------d~~~i~~~~~~~~~~~~----~~--~~~~~~~~~~~~g~~   60 (491)
T 4gc0_A            8 SYIFSITLVATLGGLLFGY---------------------DTAVISGTVESLNTVFV----AP--QNLSESAANSLLGFC   60 (491)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---------------------HHHGGGGTHHHHHHHHT----GG--GCCCHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHhc----CC--CCCCcccHHHHHHHH
Confidence            3444455556677788888                     45555555544332221    11  122333445566899


Q ss_pred             HHHHHHHHHHHHHhhhhhccccCCchHhh---------------------------------------------------
Q psy3807         187 VSIFAIGGMLGGFSGGSIADKFGRGGLGT---------------------------------------------------  215 (483)
Q Consensus       187 ~~~~~~~~~ig~~~~g~l~dr~GR~~~~~---------------------------------------------------  215 (483)
                      ++++.+|.++|++++|+++||+||++...                                                   
T Consensus        61 ~s~~~~G~~iG~~~~G~laDr~GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~~~~l~~~R~l~G~g~  140 (491)
T 4gc0_A           61 VASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV  140 (491)
T ss_dssp             HHTHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            99999999999999999999999943322                                                   


Q ss_pred             -------------------------HHHHHHHHHHHHHHHHccccc------cCCCCchhHHHHHHHHHHHHhc------
Q psy3807         216 -------------------------VNQLAVTLGLLISQILGIEPI------LGTDEGWPVLLAMLGMFQFGYN------  258 (483)
Q Consensus       216 -------------------------~~~~~~~~g~~~~~~~~~~~~------~~~~~~w~~~~~~~~i~~~~~~------  258 (483)
                                               ..+.+...|.+.++.++....      ......||+.+.+..++.++.+      
T Consensus       141 G~~~~~~~~~i~E~~p~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (491)
T 4gc0_A          141 GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTV  220 (491)
T ss_dssp             HHHHHHHHHHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTTTTHHHHHHHTTHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHHhhCCHHhhhhhHHhhhhhhhhhhhhhhhcchhhccccccccccchhhHHHhhhhhhhhhhhhhhhhcC
Confidence                                     222333333333333321110      0123468888877755544422      


Q ss_pred             --------cCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHH
Q psy3807         259 --------TGVINAPEKVTLRKLRASTQIEVDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGIN  330 (483)
Q Consensus       259 --------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  330 (483)
                              .+++.+|+++.+++.+++++.+++..+.++..+++++..  .....+    .+++..+......++++.+.+
T Consensus       221 peSp~~L~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~  294 (491)
T 4gc0_A          221 PESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTG--GRLLMF----GVGVIVIGVMLSIFQQFVGIN  294 (491)
T ss_dssp             CCCHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--THHHHS----CCTHHHHHHHHHHHHHHTCHH
T ss_pred             CCChHHHHHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhh--hHHHHh----cccHHHHHHHHHHHHHHhhhh
Confidence                    567788888888877655443333333322222222111  111222    234566777778888889999


Q ss_pred             HHHHhHHHHHhhcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchh
Q psy3807         331 AVFYYSTALFESSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQE  410 (483)
Q Consensus       331 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  410 (483)
                      .+.+|.|.+.+..+.+..+......+.++..+++.+++++++||+|||+.++.+...+.++++.++......        
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~~~--------  366 (491)
T 4gc0_A          295 VVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQ--------  366 (491)
T ss_dssp             HHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHTT--------
T ss_pred             HHHhcchHHHHhcCCCccchhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHhcc--------
Confidence            999999999999988888888888889999999999999999999999999999888888877766543321        


Q ss_pred             hhhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHHHHHHHHHhHHhhhh
Q psy3807         411 MIDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIANFVVGLGFPTLNLP  479 (483)
Q Consensus       411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~  479 (483)
                         ...+..++...++..+++.+++++.+++++|++|++.|+++.|++++++++++++++.++|.+.+.
T Consensus       367 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~  432 (491)
T 4gc0_A          367 ---APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKN  432 (491)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHH
T ss_pred             ---cchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence               123445556666777788888899999999999999999999999999999999999999987653
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query483
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 99.78
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.6
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 98.94
d1pv7a_ 417 Lactose permease {Escherichia coli [TaxId: 562]} 98.28
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=7.6e-19  Score=172.23  Aligned_cols=291  Identities=13%  Similarity=0.046  Sum_probs=164.1

Q ss_pred             HHHhhhhccCccCChhhhHHHHHHHHHHHHHHHHHHHHhhhhhccccCC-------------------------------
Q psy3807         162 FKDVYKERNLVDMTDEKAKIFYSVAVSIFAIGGMLGGFSGGSIADKFGR-------------------------------  210 (483)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~g~l~dr~GR-------------------------------  210 (483)
                      ..|.++ ++|.+.++.      +++.+++.++..++++++|+++||+||                               
T Consensus        47 ~~p~~~-~~g~s~~~~------g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (447)
T d1pw4a_          47 AMPYLV-EQGFSRGDL------GFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVM  119 (447)
T ss_dssp             HHHHTT-SSTTCSSCH------HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCHHHHSSSSHH
T ss_pred             HHHHHH-HhCcCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHhhccccchhhhhHHHH
Confidence            345554 467777766      899999999999999999999999999                               


Q ss_pred             -------------------------------chHhhHHHHHHHHHHHHHHHHccccccCCCCchhHHHHHHHHHHHH---
Q psy3807         211 -------------------------------GGLGTVNQLAVTLGLLISQILGIEPILGTDEGWPVLLAMLGMFQFG---  256 (483)
Q Consensus       211 -------------------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~~i~~~~---  256 (483)
                                                     +...+..+.+..+|..+++.++.... ....+||..+++.+++..+   
T Consensus       120 ~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~i~~~~~~~~~-~~~~~w~~~~~~~~~~~~~~~~  198 (447)
T d1pw4a_         120 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGM-AWFNDWHAALYMPAFCAILVAL  198 (447)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHHHHTSHHHHHHHHH-HHTCCSTTCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccchhhhhhhhhhhhHh-hhhhcccccchhhhhhHHHHHH
Confidence                                           45566666666777666665432211 1234677766655332222   


Q ss_pred             ---hccCCChHHHHHHHHHHhCCcchH-HHHHHHHHHHHHhhcccccchhhhhccCCCchHHHHHHHHHHhhhcchHHHH
Q psy3807         257 ---YNTGVINAPEKVTLRKLRASTQIE-VDIEEMRVEQIAQQSESKISMSELLCSSTLRKPLIIGIVMQLSQQFSGINAV  332 (483)
Q Consensus       257 ---~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (483)
                         ...+..+++..     ....++.+ ++.++.+++.+++...++...++.++++..+    ......++.. ......
T Consensus       199 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~  268 (447)
T d1pw4a_         199 FAFAMMRDTPQSCG-----LPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLW----YIAIANVFVY-LLRYGI  268 (447)
T ss_dssp             HHHHHCCCSSTTTC-----CCSCTTTCCC-------------CCTHHHHHHTSSCHHHH----HHHHHHHHHH-HHHHHH
T ss_pred             HHHHhcccchhhcc-----cchhhhhhhhcccchhhccccccchhhHHHHHHHcCchHH----HHHHHhhhhh-hhhhcc
Confidence               11222111100     00000000 0011111111111112222233444433222    2222222222 233445


Q ss_pred             HHhHHHHHh-hcCCCCcchhHHHHHHHHHHHHHHHhHHHHhhccCChHHHHhhhHHHHHHHHHHHHHHHHHhhhccchhh
Q psy3807         333 FYYSTALFE-SSGLSEKTAKFTTIGIGAVMVTMTIISIPLMDRMGRRTLHLYGLGGMFIFSIFITISLLIKEFFGFVQEM  411 (483)
Q Consensus       333 ~~~~~~~~~-~~g~s~~~~~~~~~~~~~~~~~g~~~~~~l~dr~grr~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~  411 (483)
                      ..+.|.+++ ..+.+..+.........+..+++.++.+++.||++||+..........+...........          
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  338 (447)
T d1pw4a_         269 LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMN----------  338 (447)
T ss_dssp             HHHHHHHBTTBSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTSC----------
T ss_pred             hhhhhhhcccccccccchhhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHhc----------
Confidence            555666654 468888888899999999999999999999999998765544433333322222221110          


Q ss_pred             hhhHHHHHHHHHHHHHHHhccccccccceeeccccCCCchhHHHHHHHHHHHHH-HHHHHHHhHHhhhhcC
Q psy3807         412 IDWMSYLSVISILGFVVFFAVGPGSIPWMITAELFSQGPRPAAMSIAVLVNWIA-NFVVGLGFPTLNLPYR  481 (483)
Q Consensus       412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~R~~~~g~~~~~~~~~-~~~~~~~~~~l~~~~g  481 (483)
                      .....+...+..++. .+...+..+..+.+..|.+|++.|+++.|+.+.+++++ .+.++.+.+.+.|.+|
T Consensus       339 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~~~g  408 (447)
T d1pw4a_         339 PAGNPTVDMICMIVI-GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG  408 (447)
T ss_dssp             CTTCHHHHHHHHHHH-HHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred             ccccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            011122222222222 22233344556788899999999999999999999885 5667899999988876
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure