Psyllid ID: psy3923


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70---
MSKTVQKQEAPMPMAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
ccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccccEEcEEcc
ccHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcHcHHHHHHHHHHHHHHccccccccccccEEcc
msktvqkqeapmpmapaladpVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
msktvqkqeapmpmaPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIskqiseeqrykadflk
MSKTVQKQEapmpmapaladpvaFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
******************ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHIS***************
***********************FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQH*******EQRYKADFLK
*************MAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
******************ADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSKTVQKQEAPMPMAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFLK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query73 2.2.26 [Sep-21-2011]
Q7PQV7 300 ADP,ATP carrier protein 2 yes N/A 0.739 0.18 0.814 4e-19
Q3V132 320 ADP/ATP translocase 4 OS= yes N/A 0.726 0.165 0.792 3e-16
Q26365 312 ADP,ATP carrier protein O yes N/A 0.684 0.160 0.8 5e-16
Q27238 301 ADP,ATP carrier protein 1 no N/A 0.698 0.169 0.764 1e-15
P05141 298 ADP/ATP translocase 2 OS= yes N/A 0.657 0.161 0.770 4e-15
Q09073 298 ADP/ATP translocase 2 OS= no N/A 0.657 0.161 0.770 5e-15
Q5R5A1 298 ADP/ATP translocase 2 OS= yes N/A 0.657 0.161 0.770 5e-15
Q8SQH5 298 ADP/ATP translocase 2 OS= yes N/A 0.657 0.161 0.770 5e-15
P51881 298 ADP/ATP translocase 2 OS= no N/A 0.657 0.161 0.770 6e-15
Q000K2 298 ADP/ATP translocase 2 OS= N/A N/A 0.657 0.161 0.770 6e-15
>sp|Q7PQV7|ADT2_ANOGA ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2 Back     alignment and function desciption
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/54 (81%), Positives = 48/54 (88%)

Query: 16 PALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKA 69
          P L+DPVAF KDF AGG+SAA+SKTAVAPIERVKLLLQVQHISKQI+E  RYK 
Sbjct: 2  PGLSDPVAFIKDFAAGGISAAISKTAVAPIERVKLLLQVQHISKQIAEADRYKG 55




Catalyzes the exchange of ADP and ATP across the mitochondrial inner membrane.
Anopheles gambiae (taxid: 7165)
>sp|Q3V132|ADT4_MOUSE ADP/ATP translocase 4 OS=Mus musculus GN=Slc25a31 PE=2 SV=1 Back     alignment and function description
>sp|Q26365|ADT_DROME ADP,ATP carrier protein OS=Drosophila melanogaster GN=sesB PE=2 SV=4 Back     alignment and function description
>sp|Q27238|ADT1_ANOGA ADP,ATP carrier protein 1 OS=Anopheles gambiae GN=AGAP006782 PE=2 SV=2 Back     alignment and function description
>sp|P05141|ADT2_HUMAN ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=7 Back     alignment and function description
>sp|Q09073|ADT2_RAT ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3 Back     alignment and function description
>sp|Q5R5A1|ADT2_PONAB ADP/ATP translocase 2 OS=Pongo abelii GN=SLC25A5 PE=2 SV=3 Back     alignment and function description
>sp|Q8SQH5|ADT2_BOVIN ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3 Back     alignment and function description
>sp|P51881|ADT2_MOUSE ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3 Back     alignment and function description
>sp|Q000K2|ADT2_TACAC ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query73
53830700 309 putative mitochondrial ADP/ATP transloca 0.767 0.181 0.892 1e-20
307188545 300 ADP,ATP carrier protein 2 [Camponotus fl 0.726 0.176 0.905 5e-20
89213828 301 adenine nucleotide translocator [Myzus p 0.767 0.186 0.857 1e-19
240848967 310 adenine nucleotide translocator-like [Ac 0.767 0.180 0.857 1e-19
380018061 300 PREDICTED: ADP,ATP carrier protein-like 0.726 0.176 0.886 2e-19
58531215 300 ADP/ATP translocase [Apis mellifera] gi| 0.726 0.176 0.886 2e-19
292397860 300 ADP/ATP translocase [Nylanderia nr. pube 0.726 0.176 0.886 3e-19
340716266 300 PREDICTED: ADP,ATP carrier protein 2-lik 0.726 0.176 0.867 3e-19
350406435 300 PREDICTED: ADP,ATP carrier protein 2-lik 0.726 0.176 0.867 4e-19
389608219 300 stress-sensitive B [Papilio xuthus] 0.712 0.173 0.884 7e-19
>gi|53830700|gb|AAU95193.1| putative mitochondrial ADP/ATP translocase [Oncometopia nigricans] Back     alignment and taxonomy information
 Score =  103 bits (258), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/56 (89%), Positives = 53/56 (94%)

Query: 14 MAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKA 69
          M PALADPVAFAKDFIAGGVSAA+SKT VAPIERVKLLLQVQHISKQI+E+QRYK 
Sbjct: 8  MLPALADPVAFAKDFIAGGVSAAISKTTVAPIERVKLLLQVQHISKQIAEDQRYKG 63




Source: Oncometopia nigricans

Species: Oncometopia nigricans

Genus: Oncometopia

Family: Cicadellidae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307188545|gb|EFN73281.1| ADP,ATP carrier protein 2 [Camponotus floridanus] Back     alignment and taxonomy information
>gi|89213828|gb|ABD64222.1| adenine nucleotide translocator [Myzus persicae] Back     alignment and taxonomy information
>gi|240848967|ref|NP_001155502.1| adenine nucleotide translocator-like [Acyrthosiphon pisum] gi|239793510|dbj|BAH72867.1| ACYPI002892 [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|380018061|ref|XP_003692955.1| PREDICTED: ADP,ATP carrier protein-like [Apis florea] Back     alignment and taxonomy information
>gi|58531215|ref|NP_001010975.1| ADP/ATP translocase [Apis mellifera] gi|33642164|gb|AAQ24500.1| ADP/ATP translocase [Apis mellifera] gi|45645402|gb|AAS73299.1| ADP/ATP translocase [Apis mellifera] Back     alignment and taxonomy information
>gi|292397860|gb|ADE27970.1| ADP/ATP translocase [Nylanderia nr. pubens LZ-2010] Back     alignment and taxonomy information
>gi|340716266|ref|XP_003396620.1| PREDICTED: ADP,ATP carrier protein 2-like [Bombus terrestris] Back     alignment and taxonomy information
>gi|350406435|ref|XP_003487769.1| PREDICTED: ADP,ATP carrier protein 2-like [Bombus impatiens] Back     alignment and taxonomy information
>gi|389608219|dbj|BAM17721.1| stress-sensitive B [Papilio xuthus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query73
ZFIN|ZDB-GENE-070912-446 298 slc25a6 "solute carrier family 0.616 0.151 0.822 1.5e-14
FB|FBgn0003360 312 sesB "stress-sensitive B" [Dro 0.616 0.144 0.844 1.5e-14
UNIPROTKB|P12235 298 SLC25A4 "ADP/ATP translocase 1 0.616 0.151 0.844 1.9e-14
UNIPROTKB|P02722 298 SLC25A4 "ADP/ATP translocase 1 0.616 0.151 0.822 2.6e-14
UNIPROTKB|F1RZQ6 298 SLC25A4 "Uncharacterized prote 0.616 0.151 0.822 2.6e-14
MGI|MGI:1353495 298 Slc25a4 "solute carrier family 0.616 0.151 0.822 2.6e-14
RGD|620352 298 Slc25a4 "solute carrier family 0.616 0.151 0.822 2.6e-14
UNIPROTKB|Q6P9Y4 298 Slc25a4 "Solute carrier family 0.616 0.151 0.822 2.6e-14
UNIPROTKB|I7HJJ0 158 SLC25A6 "ADP/ATP translocase 3 0.616 0.284 0.777 3e-14
UNIPROTKB|Q8SQH5 298 SLC25A5 "ADP/ATP translocase 2 0.616 0.151 0.8 3.4e-14
ZFIN|ZDB-GENE-070912-446 slc25a6 "solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
 Score = 187 (70.9 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 37/45 (82%), Positives = 43/45 (95%)

Query:    24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYK 68
             FAKDF+AGGV+AA+SKTAVAPIERVKLLLQVQH SKQIS +++YK
Sbjct:     8 FAKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISADKQYK 52




GO:0055085 "transmembrane transport" evidence=IEA
GO:0005743 "mitochondrial inner membrane" evidence=IEA
GO:0006810 "transport" evidence=IEA
GO:0005215 "transporter activity" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
FB|FBgn0003360 sesB "stress-sensitive B" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|P12235 SLC25A4 "ADP/ATP translocase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P02722 SLC25A4 "ADP/ATP translocase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RZQ6 SLC25A4 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1353495 Slc25a4 "solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|620352 Slc25a4 "solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q6P9Y4 Slc25a4 "Solute carrier family 25 (Mitochondrial carrier; adenine nucleotide translocator), member 4, isoform CRA_a" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|I7HJJ0 SLC25A6 "ADP/ATP translocase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8SQH5 SLC25A5 "ADP/ATP translocase 2" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P49382ADT_KLULANo assigned EC number0.68880.60270.1442yesN/A
Q3V132ADT4_MOUSENo assigned EC number0.79240.72600.1656yesN/A
P05141ADT2_HUMANNo assigned EC number0.77080.65750.1610yesN/A
Q26365ADT_DROMENo assigned EC number0.80.68490.1602yesN/A
P04710ADT1_YEASTNo assigned EC number0.59570.63010.1488yesN/A
O49447ADT3_ARATHNo assigned EC number0.65850.56160.1081yesN/A
Q5R5A1ADT2_PONABNo assigned EC number0.77080.65750.1610yesN/A
O97470ADT_DICDINo assigned EC number0.580.68490.1618yesN/A
P31691ADT_ORYSJNo assigned EC number0.68290.56160.1073yesN/A
Q8SQH5ADT2_BOVINNo assigned EC number0.77080.65750.1610yesN/A
Q09188ADT_SCHPONo assigned EC number0.78120.43830.0993yesN/A
Q7PQV7ADT2_ANOGANo assigned EC number0.81480.73970.18yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query73
PTZ00169 300 PTZ00169, PTZ00169, ADP/ATP transporter on adenyla 2e-15
pfam0015396 pfam00153, Mito_carr, Mitochondrial carrier protei 2e-08
>gnl|CDD|240302 PTZ00169, PTZ00169, ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
 Score = 67.5 bits (165), Expect = 2e-15
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 2/47 (4%)

Query: 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQ--RYK 68
          FA DF+ GG+SAA+SKTAVAPIERVK+L+Q Q    +I   +  RY 
Sbjct: 7  FATDFLMGGISAAISKTAVAPIERVKMLIQTQDSIPEIKSGKVPRYS 53


Length = 300

>gnl|CDD|215754 pfam00153, Mito_carr, Mitochondrial carrier protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 73
KOG0750|consensus304 98.96
KOG0753|consensus 317 98.9
KOG0754|consensus 294 98.88
KOG0752|consensus320 98.84
PTZ00168 259 mitochondrial carrier protein; Provisional 98.81
KOG0751|consensus 694 98.8
KOG0762|consensus311 98.76
PF0015395 Mito_carr: Mitochondrial carrier protein; InterPro 98.71
KOG0753|consensus 317 98.71
KOG0758|consensus297 98.69
KOG0760|consensus302 98.68
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 98.67
KOG0764|consensus 299 98.63
KOG0755|consensus 320 98.62
KOG0757|consensus 319 98.62
KOG0752|consensus 320 98.6
KOG0762|consensus 311 98.59
PTZ00169 300 ADP/ATP transporter on adenylate translocase; Prov 98.56
KOG0751|consensus 694 98.53
PTZ00168259 mitochondrial carrier protein; Provisional 98.52
KOG0758|consensus 297 98.47
KOG0768|consensus323 98.47
KOG0757|consensus 319 98.45
KOG0764|consensus 299 98.43
KOG0770|consensus353 98.41
KOG0759|consensus 286 98.34
KOG0760|consensus 302 98.31
KOG0749|consensus 298 98.28
KOG0761|consensus361 98.27
KOG0759|consensus286 98.27
KOG0754|consensus294 98.17
KOG0036|consensus 463 98.14
KOG0769|consensus 308 98.13
KOG0766|consensus297 98.13
KOG0761|consensus 361 98.12
KOG0756|consensus299 98.1
KOG0750|consensus 304 98.06
KOG0755|consensus 320 97.94
KOG0765|consensus333 97.89
KOG0036|consensus 463 97.83
KOG0770|consensus 353 97.8
KOG0763|consensus301 97.72
KOG0769|consensus 308 97.7
KOG0756|consensus 299 97.67
KOG0766|consensus 297 97.61
KOG0768|consensus 323 97.58
KOG0765|consensus 333 97.15
KOG1519|consensus297 96.85
KOG0749|consensus298 96.76
KOG0763|consensus 301 96.58
KOG2954|consensus427 96.24
KOG0767|consensus 333 95.71
KOG0767|consensus333 94.89
PF1273274 YtxH: YtxH-like protein; InterPro: IPR024623 This 81.72
>KOG0750|consensus Back     alignment and domain information
Probab=98.96  E-value=9.2e-10  Score=73.11  Aligned_cols=54  Identities=28%  Similarity=0.349  Sum_probs=43.4

Q ss_pred             CCCCCCCChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhcccccccccccccccccc
Q psy3923          14 MAPALADPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADFL   72 (73)
Q Consensus        14 ~~~~~~~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~~   72 (73)
                      ..++.+....|+.+|++|+++|+.+.+++.|+||||||+|+-..     +...|+|++|
T Consensus       201 r~~D~Sg~avF~~sF~agl~~gs~sa~~vtPlDVvKTRiQ~~~~-----ned~~~gi~d  254 (304)
T KOG0750|consen  201 RKKDGSGAAVFYQSFLAGLVAGSASAIVVTPLDVVKTRIQTLGD-----NEDNYKGIFD  254 (304)
T ss_pred             CCCCcccchhhHHHHHHHHHhhhhhhhhcccHHHHHHHHhhccc-----CccccccHHH
Confidence            34566777889999999999999999999999999999996532     3345666654



>KOG0753|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PF00153 Mito_carr: Mitochondrial carrier protein; InterPro: IPR018108 A variety of substrate carrier proteins that are involved in energy transfer are found in the inner mitochondrial membrane or integral to the membrane of other eukaryotic organelles such as the peroxisome [, , , , , ] Back     alignment and domain information
>KOG0753|consensus Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0752|consensus Back     alignment and domain information
>KOG0762|consensus Back     alignment and domain information
>PTZ00169 ADP/ATP transporter on adenylate translocase; Provisional Back     alignment and domain information
>KOG0751|consensus Back     alignment and domain information
>PTZ00168 mitochondrial carrier protein; Provisional Back     alignment and domain information
>KOG0758|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0757|consensus Back     alignment and domain information
>KOG0764|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0760|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0759|consensus Back     alignment and domain information
>KOG0754|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0761|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0750|consensus Back     alignment and domain information
>KOG0755|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG0036|consensus Back     alignment and domain information
>KOG0770|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG0769|consensus Back     alignment and domain information
>KOG0756|consensus Back     alignment and domain information
>KOG0766|consensus Back     alignment and domain information
>KOG0768|consensus Back     alignment and domain information
>KOG0765|consensus Back     alignment and domain information
>KOG1519|consensus Back     alignment and domain information
>KOG0749|consensus Back     alignment and domain information
>KOG0763|consensus Back     alignment and domain information
>KOG2954|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>KOG0767|consensus Back     alignment and domain information
>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query73
1okc_A 297 Structure Of Mitochondrial AdpATP CARRIER IN COMPLE 1e-15
>pdb|1OKC|A Chain A, Structure Of Mitochondrial AdpATP CARRIER IN COMPLEX WITH Carboxyatractyloside Length = 297 Back     alignment and structure

Iteration: 1

Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/46 (80%), Positives = 42/46 (91%) Query: 24 FAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKA 69 F KDF+AGGV+AA+SKTAVAPIERVKLLLQVQH SKQIS E++YK Sbjct: 7 FLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKG 52

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query73
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 4e-21
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Length = 297 Back     alignment and structure
 Score = 82.3 bits (204), Expect = 4e-21
 Identities = 37/49 (75%), Positives = 44/49 (89%)

Query: 20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYK 68
            ++F KDF+AGGV+AA+SKTAVAPIERVKLLLQVQH SKQIS E++YK
Sbjct: 3  QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYK 51


Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query73
1okc_A 297 ADP, ATP carrier protein heart isoform T1; mitocho 98.99
1okc_A297 ADP, ATP carrier protein heart isoform T1; mitocho 98.71
2lck_A 303 Mitochondrial uncoupling protein 2; membrane prote 98.68
2lck_A303 Mitochondrial uncoupling protein 2; membrane prote 98.65
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
Probab=98.99  E-value=3.2e-10  Score=73.83  Aligned_cols=38  Identities=76%  Similarity=1.088  Sum_probs=34.6

Q ss_pred             CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccc
Q psy3923          20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHI   57 (73)
Q Consensus        20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~   57 (73)
                      +.++.+..+++|+++|+++.++++|+|+||+|||++..
T Consensus         3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~   40 (297)
T 1okc_A            3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHA   40 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhccc
Confidence            35678899999999999999999999999999999863



>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A* Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 73
d1okca_ 292 f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos ta 6e-17
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Length = 292 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
 Score = 70.1 bits (170), Expect = 6e-17
 Identities = 37/48 (77%), Positives = 44/48 (91%)

Query: 21 PVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYK 68
           ++F KDF+AGGV+AA+SKTAVAPIERVKLLLQVQH SKQIS E++YK
Sbjct: 3  ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYK 50


Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query73
d1okca_ 292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 99.24
d1okca_292 ADP,ATP carrier protein {Cow (Bos taurus), heart i 98.64
>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: Mitochondrial carrier
superfamily: Mitochondrial carrier
family: Mitochondrial carrier
domain: ADP,ATP carrier protein
species: Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
Probab=99.24  E-value=2.5e-12  Score=81.35  Aligned_cols=52  Identities=71%  Similarity=0.985  Sum_probs=41.3

Q ss_pred             CChhHHHHHHHHHHHHHhHhhhhccHHHHHHHHhhccccccccccccccccc
Q psy3923          20 DPVAFAKDFIAGGVSAAVSKTAVAPIERVKLLLQVQHISKQISEEQRYKADF   71 (73)
Q Consensus        20 ~~~~~~~~~~aG~~aG~~~~~~~~P~d~vKtrlQ~q~~~~~~~~~~~y~g~~   71 (73)
                      ++.+++..|++|++||+++.++++|+|+||+|+|+|...........|+|++
T Consensus         2 ~~~~~~~~~laG~~a~~i~~~~~~Pld~iK~r~Q~~~~~~~~~~~~~~~~~~   53 (292)
T d1okca_           2 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGII   53 (292)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCCCCCCcccccCCHH
Confidence            5788999999999999999999999999999999987643222333444443



>d1okca_ f.42.1.1 (A:) ADP,ATP carrier protein {Cow (Bos taurus), heart isoform t1 [TaxId: 9913]} Back     information, alignment and structure