Psyllid ID: psy3987

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPTD
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEccccccccccccccccEEcccccccccccccccccccccccccEccccccccEccccccccEcccccccEEEcccccccEccccccccEcccccccccEcccccccEcccccccccccccccccEccccccccEccccccccccccccccEEcccccc
Coil and Loop (DISEMBL)
svcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavcqsvcgtavchvptd
Flexible Loop (DISEMBL)
svcgtavcQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPTD
Low Complexity Region (SEG)
SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPTD
Disordered region (IsUnstruct)
**CGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHV***
Disordered Region (DISOPRED)
SVCGTAVCQS******************************************************************************************************************************************************CQSVCGTAVCHVP**
Disordered Region (DISEMBL)
SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPTD
Disordered Region (DISPRO)
*****AVCQS**GTAVC****GTAVCQSV***AV*****GT**C**************TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQS*CGTAVCQS*CGTAVCQSVCGT********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPTD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
A8MXZ3	250	Keratin-associated protei	yes	N/A	0.857	0.6	0.368	4e-08
A2A5X5	502	Keratin-associated protei	yes	N/A	0.702	0.245	0.402	6e-05

>sp|A8MXZ3|KRA91_HUMAN Keratin-associated protein 9-1 OS=Homo sapiens GN=KRTAP9-1 PE=3 SV=1

 Score = 57.8 bits (138), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 78/163 (47%), Gaps = 13/163 (7%)

Query: 1   SVCGTAVCQSVCGTAVCQSV-CGTAVCQSVCGTAVCQ-SVCGTAVCQSV-CGTAVC-QSV 56
           S C  + CQ  C    CQ+  C T  CQ  C  + CQ S C T  CQ   CG++ C Q+ 
Sbjct: 41  SCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTS 100

Query: 57  CGTAVCQSVCGTAVCQSVCGTAVCQSVC-GTAVCQSVCGTAVCQSVCGTAVCQSV-CGTA 114
           CG++ CQ +CG++ CQ  C     Q++C  T  CQ  C    C   C    CQ   CG++
Sbjct: 101 CGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCQPTC---CRNTSCQPTCCGSS 157

Query: 115 VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 157
            CQ  C    CQ++C +  CQ  C T      C T  CQ  CG
Sbjct: 158 CCQPCCHPTCCQTICRSTCCQPSCVTR----CCSTPCCQPTCG 196

In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin-associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins.
Homo sapiens (taxid: 9606)

>sp|A2A5X5|KR161_MOUSE Keratin-associated protein 16-1 OS=Mus musculus GN=Krtap16-1 PE=3 SV=1

 Score = 47.0 bits (110), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/139 (40%), Positives = 68/139 (48%), Gaps = 16/139 (11%)

Query: 3   CGTAVCQSVCGTAVCQSV-CGTAVCQSV-CGTAVCQSV------CGTAVCQSVCGTAVC- 53
           C   +CQ  C  + CQ V C T+ CQ V C  A CQ V      C   +C+  C +AVC 
Sbjct: 134 CEATMCQPSCSVSSCQPVCCETSSCQPVLCLPATCQPVICKPCCCQPVICEPSCCSAVCA 193

Query: 54  -QSVCGTAVCQS-VCGTAVCQSVCGTAV-CQSVCGTA-VCQSV-CGTAVCQSVCGTA-VC 107
             + C   +C+  VC  A CQ VC T   C SVC  A  CQ V C T+ C+  C  A  C
Sbjct: 194 VPASCQPMICEPVVCEPACCQPVCPTPSCCPSVCSAASSCQPVGCETSPCEPPCSEASAC 253

Query: 108 Q-SVCGTAVCQSVCGTAVC 125
           Q S C   VC+ VC   VC
Sbjct: 254 QPSACMALVCEPVCLRPVC 272

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
156340034	199	hypothetical protein NEMVEDRAFT_v1g4591	0.971	0.854	0.447	9e-19
326667512	122	PREDICTED: hypothetical protein LOC10053	0.588	0.844	0.553	4e-18
156338802	186	hypothetical protein NEMVEDRAFT_v1g63584	0.96	0.903	0.214	2e-17
159468392	187	hypothetical protein CHLREDRAFT_75392 [C	0.971	0.909	0.288	6e-15
156398793	152	predicted protein [Nematostella vectensi	0.794	0.914	0.232	6e-15
301629280	166	PREDICTED: hypothetical protein LOC10049	0.851	0.897	0.442	5e-14
308462068	235	hypothetical protein CRE_03454 [Caenorha	0.897	0.668	0.324	1e-13
308457988	179	hypothetical protein CRE_20589 [Caenorha	0.908	0.888	0.331	2e-13
58578772	625	hypothetical protein ERWE_CDS_01080 [Ehr	0.988	0.276	0.398	6e-13
291238923	959	PREDICTED: hypothetical protein [Saccogl	0.965	0.176	0.260	1e-12

>gi|156340034|ref|XP_001620334.1| hypothetical protein NEMVEDRAFT_v1g4591 [Nematostella vectensis] gi|156205109|gb|EDO28234.1| predicted protein [Nematostella vectensis]

 Score = 98.6 bits (244), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/170 (44%), Positives = 76/170 (44%)

Query: 1   SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 60
           S C   VC S C   VC S C   VC S C   VC S C   VC S C   VC S C   
Sbjct: 3   SDCKYTVCLSDCEYTVCLSDCEYTVCLSDCKYTVCLSDCKYTVCLSDCKYTVCLSDCKYT 62

Query: 61  VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC 120
           VC S C   VC S C   VC S C   VC S C   VC S C   VC S C   VC S C
Sbjct: 63  VCLSDCKYTVCLSDCKYTVCLSDCKYTVCLSDCKYTVCLSDCEYTVCLSDCKYTVCLSDC 122

Query: 121 GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC 170
              VC S C   VC S C   VC S C   VC S C   VC S C   VC
Sbjct: 123 KYTVCLSDCKYTVCLSDCKYTVCLSDCKYTVCLSCCKYTVCLSGCEYTVC 172

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|326667512|ref|XP_003198613.1| PREDICTED: hypothetical protein LOC100537612 [Danio rerio]

 Score = 96.7 bits (239), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 69/103 (66%)

Query: 8   CQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 67
             SV G+AV  SV G+AV  SV G+AV  SV G+AV  SV G+AV  SV G+AV  SV G
Sbjct: 6   WGSVNGSAVLGSVNGSAVLGSVNGSAVLGSVNGSAVLGSVNGSAVLGSVAGSAVLGSVNG 65

Query: 68  TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 110
           +AV +SV G+AV  SV G+AV  SV G+AV  SV G+AV  SV
Sbjct: 66  SAVLRSVNGSAVLGSVAGSAVLGSVNGSAVLGSVNGSAVLGSV 108

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|156338802|ref|XP_001620040.1| hypothetical protein NEMVEDRAFT_v1g63584 [Nematostella vectensis] gi|156204305|gb|EDO27940.1| predicted protein [Nematostella vectensis]

 Score = 94.0 bits (232), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 9/177 (5%)

Query: 4   GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ 63
           G+ +C +  G+ +C    G+ +C    G+ +C    G+ +C    G+ +C    G+ +C 
Sbjct: 4   GSNLCNNTPGSNLCNKTPGSNLCNKTPGSNLCNKKPGSNLCNKKPGSNLCNKTPGSNLCN 63

Query: 64  SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-----SVCGTAVCQS 118
              G+ +C    G+ +C    G+ +C    G+ +C    G+ +C      ++C    C +
Sbjct: 64  KTPGSNLCNKTPGSNLCNKPPGSNLCNKTPGSNLCNKTPGSNLCNKTPGSNLCNKTPCSN 123

Query: 119 VC----GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCH 171
           +C    G+ +C    G+ +C  + G+ +C +  G+ +C     + +C +  G+ +C+
Sbjct: 124 LCNKTPGSNLCNKTPGSNLCNKMPGSNLCNNTPGSNLCNKTPCSNLCNNTPGSNLCN 180

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|159468392|ref|XP_001692365.1| hypothetical protein CHLREDRAFT_75392 [Chlamydomonas reinhardtii] gi|158268697|gb|EDO95712.1| predicted protein [Chlamydomonas reinhardtii]

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 56/170 (32%)

Query: 4   GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ 63
           GT    S  GT    +  GT    S  GT    +  GT    S  GT    +  GT    
Sbjct: 1   GTGSSPSPAGTGSSPAPAGTGSSPSPAGTGSSPAPAGTGSSPSPTGTGTSPAPAGTGSSP 60

Query: 64  SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 123
           S  GT    +  GT    S  GT    +   T    S  GT    +  GT    S  GT 
Sbjct: 61  SPTGTGSSPAPAGTGSSPSPAGTGSSPAPADTGSSPSPAGTGSSPAPAGTGSSPSPTGTG 120

Query: 124 VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVP 173
              S  GT    S  GT    S  GT    +  GT    S  GT     P
Sbjct: 121 SSPSPAGTGSSPSPAGTGSSPSPTGTGSSPAPAGTGSSPSPTGTGSSPAP 170

Source: Chlamydomonas reinhardtii

Species: Chlamydomonas reinhardtii

Genus: Chlamydomonas

Family: Chlamydomonadaceae

Order: Chlamydomonadales

Class: Chlorophyceae

Phylum: Chlorophyta

Superkingdom: Eukaryota

>gi|156398793|ref|XP_001638372.1| predicted protein [Nematostella vectensis] gi|156225492|gb|EDO46309.1| predicted protein [Nematostella vectensis]

 Score = 85.9 bits (211), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 64/142 (45%), Gaps = 3/142 (2%)

Query: 34  VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV---CQSVCGTAVCQ 90
           VC ++    VC ++    VC ++    VC ++    VC ++    +   C ++    VC 
Sbjct: 1   VCHAIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLLLPCSCHAIAPLLVCH 60

Query: 91  SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 150
           ++    VC ++    VC ++    VC ++    VC ++    VC ++    VC ++    
Sbjct: 61  AIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLLVCHAIAPLL 120

Query: 151 VCQSVCGTAVCQSVCGTAVCHV 172
           VC ++    VC ++    VCHV
Sbjct: 121 VCHAIAPLLVCHAIAPLLVCHV 142

Source: Nematostella vectensis

Species: Nematostella vectensis

Genus: Nematostella

Family: Edwardsiidae

Order: Actiniaria

Class: Anthozoa

Phylum: Cnidaria

Superkingdom: Eukaryota

>gi|301629280|ref|XP_002943771.1| PREDICTED: hypothetical protein LOC100496981 [Xenopus (Silurana) tropicalis]

 Score = 82.8 bits (203), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/149 (44%), Positives = 66/149 (44%)

Query: 7   VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC 66
           V  S CG  V  S CG  V  S CG  V  S CG  V  S CG  V  S CG  V  S C
Sbjct: 13  VSGSGCGRRVSGSGCGRRVSGSGCGRRVSGSGCGRRVSGSGCGRRVSGSGCGRRVSGSTC 72

Query: 67  GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ 126
           G  V  S CG  V  S CG  V  S CG  V  S CG  V  S CG  V  S CG  V  
Sbjct: 73  GRRVSGSGCGRRVSGSGCGRRVSGSTCGRRVSGSTCGRRVSGSTCGRRVSGSTCGRRVSG 132

Query: 127 SVCGTAVCQSVCGTAVCQSVCGTAVCQSV 155
           S CG  V  S CG  V  S CG  V   V
Sbjct: 133 SGCGRRVSGSGCGRRVSGSSCGRWVSNKV 161

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|308462068|ref|XP_003093320.1| hypothetical protein CRE_03454 [Caenorhabditis remanei] gi|308250331|gb|EFO94283.1| hypothetical protein CRE_03454 [Caenorhabditis remanei]

 Score = 81.3 bits (199), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 52/157 (33%)

Query: 2   VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 61
             GT    S  GT    S  GT    S  GT    S  GT    S  GT    S  GT  
Sbjct: 5   AAGTPADFSYAGTPADSSAAGTPADFSSAGTPADSSAAGTPADSSAAGTPDDLSSAGTPA 64

Query: 62  CQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 121
             S  GT    S  GT    +   T    S  GT    S  GT    S  GT    S  G
Sbjct: 65  DSSAAGTPADSSAAGTPADFNAPRTPANSSAAGTPANSSAAGTPTDSSAAGTPANSSAAG 124

Query: 122 TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGT 158
           T    S  GT    S  GT    S  GT    S  GT
Sbjct: 125 TPADSSAEGTPADSSAGGTPDDSSAAGTPADSSAAGT 161

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|308457988|ref|XP_003091349.1| hypothetical protein CRE_20589 [Caenorhabditis remanei] gi|308257176|gb|EFP01129.1| hypothetical protein CRE_20589 [Caenorhabditis remanei]

 Score = 80.9 bits (198), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 55/160 (34%), Gaps = 1/160 (0%)

Query: 8   CQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 67
              + GT   +S  G     S  GT    S  GT    S  GT    S  GT    S  G
Sbjct: 15  LNPINGT-YLKSAKGAPADFSAAGTPDDSSAAGTPANFSAAGTPAGFSAAGTPDDSSAAG 73

Query: 68  TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQS 127
           T    S  GT    S  GT    S  GT    S  GT    S  GT    S  GT    S
Sbjct: 74  TPANFSAAGTPAGFSAAGTPDDFSAAGTPDDSSAAGTPANFSAAGTPAGFSAAGTPANFS 133

Query: 128 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGT 167
             GT    S  GT    SV GT    S  GT    S  GT
Sbjct: 134 AAGTPADFSAAGTPADFSVAGTPADSSAAGTPADSSAAGT 173

Source: Caenorhabditis remanei

Species: Caenorhabditis remanei

Genus: Caenorhabditis

Family: Rhabditidae

Order: Rhabditida

Class: Chromadorea

Phylum: Nematoda

Superkingdom: Eukaryota

>gi|58578772|ref|YP_196984.1| hypothetical protein ERWE_CDS_01080 [Ehrlichia ruminantium str. Welgevonden] gi|58417398|emb|CAI26602.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden]

 Score = 79.3 bits (194), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 80/173 (46%)

Query: 1   SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 60
           S  G AV  S  G+AV  S  G AV  S  G+ V  S  G AV  S  G+ V  S  G A
Sbjct: 172 SPEGAAVTSSPEGSAVTSSPEGAAVTSSPEGSVVTSSPEGAAVTSSPEGSVVTSSPEGAA 231

Query: 61  VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC 120
           V  S  G  V  S  G AV  S  G+ V  S  G AV  S  G+ V  S  G AV  S  
Sbjct: 232 VTSSPEGAVVTSSPEGAAVTSSPEGSVVTSSPKGAAVTSSPKGSVVTSSPKGAAVTSSPE 291

Query: 121 GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVP 173
           G+ V  S  G+AV  S  G+ V  S  G+AV  S  G+ V  S  G+AV   P
Sbjct: 292 GSVVTSSPKGSAVTSSPKGSVVTSSPKGSAVTSSPEGSVVTSSPEGSAVTSSP 344

Source: Ehrlichia ruminantium str. Welgevonden

Species: Ehrlichia ruminantium

Genus: Ehrlichia

Family: Anaplasmataceae

Order: Rickettsiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|291238923|ref|XP_002739375.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 76/219 (34%), Gaps = 50/219 (22%)

Query: 1   SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV----------------- 43
           SV G  +  SV G      V G  +  SV G  +  SV G  +                 
Sbjct: 708 SVTGNTLVNSVTGDTFVNGVTGNTLVNSVTGNTLVNSVTGNTLVKCYREHACQQCYREHA 767

Query: 44  CQSVCGTAVC---------------------------QSVCGTAVCQSVCGTAVCQSVCG 76
           CQ + GT +                             SV G  +  SV G  +  SV G
Sbjct: 768 CQVLQGTRLSTVLQGTLLSTVLQGTLLLTVLQENTLVNSVAGNTLVNSVTGNTLVNSVTG 827

Query: 77  TAVCQSVCGTAVCQSVCG------TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 130
             +  SV G  +  SV G        +  SV G  +  SV G  +  SV G  +  SV G
Sbjct: 828 NTLVNSVTGNTLVNSVTGNTLVNRNTLVNSVTGNTLVNSVTGNTLVNSVTGNTLVNSVTG 887

Query: 131 TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 169
             +  SV G  +  SV G  +  SV G  +  SV G  +
Sbjct: 888 NTLVNSVTGNTLVNSVTGNTLVNSVTGNTLVNSVTGNTL 926

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
UNIPROTKB|F1LYP2	207	F1LYP2 "Uncharacterized protei	0.914	0.772	0.439	1.9e-35
UNIPROTKB|A8MXZ3	250	KRTAP9-1 "Keratin-associated p	0.96	0.672	0.357	1e-29
MGI|MGI:1354758	223	Krtap5-4 "keratin associated p	0.942	0.739	0.404	7.3e-27
UNIPROTKB|F1M294	202	LOC680396 "Protein LOC680396"	0.948	0.821	0.352	1.9e-26
UNIPROTKB|F1M4L6	199	LOC680396 "Protein LOC680396"	0.948	0.834	0.356	6.6e-26
MGI|MGI:1354732	230	Krtap5-1 "keratin associated p	0.891	0.678	0.397	1.1e-25
UNIPROTKB|P60371	365	KRTAP10-6 "Keratin-associated	0.942	0.452	0.365	2.2e-25
UNIPROTKB|E1BAH7	296	KRTAP9-1 "Uncharacterized prot	0.925	0.547	0.346	2.2e-25
MGI|MGI:3650326	502	Krtap16-1 "keratin associated	0.891	0.310	0.403	5.8e-25
MGI|MGI:2149673	241	Krtap5-5 "keratin associated p	0.96	0.697	0.396	5.9e-25

UNIPROTKB|F1LYP2 F1LYP2 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 76/173 (43%), Positives = 97/173 (56%)

Query:     1 SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 60
             +VC   VC SVC   VC +VC   VC SVC   VC +VC   VC SVC   VC +VC   
Sbjct:    41 NVC--MVCHSVCPCKVCHNVC--MVCHSVCPCKVCHNVC--MVCHSVCPCKVCHNVC--M 92

Query:    61 VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTA-VCQSVCGTAVCQS 118
             VC SVC   VC +VC   +C +VC   +C S C   V   ++C    VC +VC   VC +
Sbjct:    93 VCHSVCPCKVCHNVCPCMICHNVC---LCLSQCVPTVWSVTMCAHCKVCHNVCPCKVCHN 149

Query:   119 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCH 171
             VC + VC +VC + VC +VC   VC +VC + VC ++C   VC +VC   VCH
Sbjct:   150 VCPSKVCHNVCPSKVCDNVCPCKVCHNVCSSKVCHNICPGKVCHNVCPCMVCH 202

GO:0009055 "electron carrier activity" evidence=IEA

GO:0051536 "iron-sulfur cluster binding" evidence=IEA

UNIPROTKB|A8MXZ3 KRTAP9-1 "Keratin-associated protein 9-1" [Homo sapiens (taxid:9606)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 64/179 (35%), Positives = 87/179 (48%)

Query:     3 CGTAVCQSVCGTAVCQSVCG-TAVCQ-SVCGTAVCQSVCGTAVCQSVC-GTAVCQSVCGT 59
             C T  C++ C      + C  T  CQ S C  + CQ  C    CQ+ C  T  CQ  C  
Sbjct:    14 CRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVA 73

Query:    60 AVCQ-SVCGTAVCQ-SVCGTAVC-QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC-GTAV 115
             + CQ S C T  CQ + CG++ C Q+ CG++ CQ +CG++ CQ  C     Q++C  T  
Sbjct:    74 SCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTC 133

Query:   116 CQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVP 173
             CQ  C    C   C    CQ + CG++ CQ  C    CQ++C +  CQ  C T  C  P
Sbjct:   134 CQPTCCQPTC---CRNTSCQPTCCGSSCCQPCCHPTCCQTICRSTCCQPSCVTRCCSTP 189

GO:0045095 "keratin filament" evidence=IEA

MGI|MGI:1354758 Krtap5-4 "keratin associated protein 5-4" [Mus musculus (taxid:10090)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 72/178 (40%), Positives = 83/178 (46%)

Query:     3 CGTAV-CQSVCGTAV-CQSVCGTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGT 59
             CG+   C+  CG+   C+  CG+  C   C    CQS  C    CQS C    C S CG+
Sbjct:    44 CGSCGGCKGGCGSCGGCKGGCGS--CGG-CKGGCCQSSCCKPCCCQSSCCKPCCSSGCGS 100

Query:    60 AVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQS-VCGTAVCQS-VCGTAVCQSVCGTAVC 116
             + CQS  C    CQS C    C S CG++ CQS  C    CQS  C    CQS C    C
Sbjct:   101 SCCQSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCC 160

Query:   117 QSVCGTAVCQS-VCGTAVCQS-VCGTAVCQS-VCGTAVCQS-VCGTAVCQSVCGTAVC 170
              S CG++ CQS  C    CQS  C    CQS  C    CQS  C    CQS C   VC
Sbjct:   161 SSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCAPVC 218

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|F1M294 LOC680396 "Protein LOC680396" [Rattus norvegicus (taxid:10116)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 62/176 (35%), Positives = 84/176 (47%)

Query:     1 SVCGTAVCQ-SVCGTAVCQ-SVCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQSVC 57
             S C ++ CQ S C ++ CQ S C  + CQS  C  + CQ  C  + CQ  C ++ CQS C
Sbjct:    27 SCCQSSCCQPSCCQSSCCQPSCCQPSCCQSSCCQPSCCQPCCRPSCCQPCCQSSCCQSSC 86

Query:    58 GTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG-TAV 115
                 CQ  C    CQ S CG++ CQ  C T  C++    +   S C T  CQ  C  ++ 
Sbjct:    87 ----CQPSCCQPCCQPSCCGSSCCQPCCQTTCCRTCFQPSCVSSCCSTPCCQPCCCVSSC 142

Query:   116 CQSVCGTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC 170
             CQ  C  + CQ  C  + C+S  C  + CQ  C  + CQS C    C+  C    C
Sbjct:   143 CQPCCRPSCCQPCCRPSCCESSCCQPSCCQPCCRPSCCQSSCCKPCCEPFCLNLCC 198

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|F1M4L6 LOC680396 "Protein LOC680396" [Rattus norvegicus (taxid:10116)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 67/188 (35%), Positives = 89/188 (47%)

Query:     1 SVCGTAVCQSVCG-TAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQS-VCGTAVCQS-V 56
             S C T  CQ  C  ++ CQ  C  + CQS C    CQ S C ++ CQS  C  + CQS  
Sbjct:     3 SCCSTPCCQPCCCVSSCCQPCCQPSCCQSSC----CQPSCCQSSCCQSSCCQPSCCQSSC 58

Query:    57 CGTAVCQSVCGTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQ-SVCGTAVCQ-----S 109
             C  + CQ  C  + CQ  C ++ CQS  C  + CQ  C ++ CQ S C    CQ     S
Sbjct:    59 CQPSCCQPCCRPSCCQPCCQSSCCQSSCCQPSCCQPCCQSSCCQPSCCKPCCCQPCCQPS 118

Query:   110 VCGTAVCQSVCGTAVCQSV------CGTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQ 162
              CG++ CQ  C T  C++       C  + CQ  C  + C+S  C  + CQ  C  + CQ
Sbjct:   119 CCGSSCCQPCCQTTCCRTCFQPSCCCRPSCCQPCCRPSCCESSCCQPSCCQPCCRPSCCQ 178

Query:   163 SVCGTAVC 170
             S C    C
Sbjct:   179 SSCCKPCC 186

GO:0045095 "keratin filament" evidence=IEA

MGI|MGI:1354732 Krtap5-1 "keratin associated protein 5-1" [Mus musculus (taxid:10090)]

 Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 68/171 (39%), Positives = 82/171 (47%)

Query:     3 CGTAV--CQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 60
             CG++   C S CG++ C   CG++ C+ VC    C  VC  + C   C    CQS C   
Sbjct:    67 CGSSCGGCGS-CGSS-CGG-CGSSCCKPVC---CCVPVCSCSSCGG-CKPCCCQSSCCKP 119

Query:    61 VCQSVCGTAVCQS-VCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQS-VCGTAVCQ 117
              C S CG++ CQS  C    CQS  C    CQS C    C S CG++ CQS  C    CQ
Sbjct:   120 CCSSGCGSSCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQ 179

Query:   118 S-VCGTAVCQS-VCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQSVC 165
             S  C    CQS  C    CQS  C    CQS C    C S CG++ CQ  C
Sbjct:   180 SSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCSSGCGSSCCQDSC 230

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|P60371 KRTAP10-6 "Keratin-associated protein 10-6" [Homo sapiens (taxid:9606)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 65/178 (36%), Positives = 87/178 (48%)

Query:     3 CGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 61
             C  + CQS C ++   S C  + CQ + C ++ CQ  C   VC   C T  C+ VC  +V
Sbjct:    72 CEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVC---CKTVCCKPVCCVSV 128

Query:    62 C---QSVCGTAVCQSVCGTAV-CQSVCGTAVC-QSVCGTAVCQSVCGTAVCQSVCGTAVC 116
             C    S C  + CQS C T+  CQ  C   VC + VC + +  S C  + C S   +  C
Sbjct:   129 CCGDSSCCQQSSCQSACCTSSPCQQACCVPVCCKPVC-SGISSSCCQQSSCVSCVSSPCC 187

Query:   117 QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVPT 174
             Q+VC  + CQS C ++   S C  + CQ  C T+   S C  A C  VC   VC VPT
Sbjct:   188 QAVCEPSPCQSGCTSSCTPSCCQQSSCQPTCCTS---SPCQQACCVPVCCVPVCCVPT 242

GO:0045095 "keratin filament" evidence=IEA

UNIPROTKB|E1BAH7 KRTAP9-1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
 Identities = 60/173 (34%), Positives = 78/173 (45%)

Query:     3 CGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTAVCQSVCGTAVC-QSVCGTAVCQSVCGTA 60
             C T  C+  C T  CQ  CG ++ CQ  C  A CQ+ C    C +  C T  CQ  C   
Sbjct:    37 CRTTCCKPTCVTTCCQPACGGSSSCQPCCPPACCQTTCCRTTCLKPTCVTTCCQPTCCEP 96

Query:    61 VCQSVCGTAVC-QS----VCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTAVCQSVCGTA 114
              C   C    C QS     C T+ C+  C T  CQ  CG ++ CQ  C    CQ+ C   
Sbjct:    97 SCCRPCCPPTCYQSSENTCCRTSCCKPTCVTTCCQHNCGGSSCCQPCCLPIRCQTTCCRT 156

Query:   115 VC-QSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC 165
              C + +C T  CQ + C ++ CQ  C    CQ +  T  C+  C T+ CQ  C
Sbjct:   157 TCLKPICVTTCCQPTCCESSCCQPSCPQTCCQ-ITETTCCKPTCVTSCCQPTC 208

GO:0045095 "keratin filament" evidence=IEA

MGI|MGI:3650326 Krtap16-1 "keratin associated protein 16-1" [Mus musculus (taxid:10090)]

 Score = 289 (106.8 bits), Expect = 5.8e-25, P = 5.8e-25
 Identities = 71/176 (40%), Positives = 88/176 (50%)

Query:     3 CGTAVCQSVCGTAVCQSVC-GTAVCQSV-CGTAVCQSV-CGTAVCQSV-CGTAVCQSVCG 58
             C   +CQ  C  + CQ VC  T+ CQ V C  A CQ V C    CQ V C  + C +VC 
Sbjct:   134 CEATMCQPSCSVSSCQPVCCETSSCQPVLCLPATCQPVICKPCCCQPVICEPSCCSAVCA 193

Query:    59 T-AVCQS-VCGTAVCQSVCGTAVCQSVCGT-AVCQSVCGTAV-CQSV-CGTAVCQSVCGT 113
               A CQ  +C   VC+  C    CQ VC T + C SVC  A  CQ V C T+ C+  C  
Sbjct:   194 VPASCQPMICEPVVCEPAC----CQPVCPTPSCCPSVCSAASSCQPVGCETSPCEPPCSE 249

Query:   114 A-VCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ--SVCGTAVCQSVC 165
             A  CQ S C   VC+ VC   VC   C    C+  C ++ CQ  S C +++CQ VC
Sbjct:   250 ASACQPSACMALVCEPVCLRPVC---CVQGPCEPPCVSSSCQDSSCCVSSICQPVC 302

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0045095 "keratin filament" evidence=IEA

MGI|MGI:2149673 Krtap5-5 "keratin associated protein 5-5" [Mus musculus (taxid:10090)]

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 73/184 (39%), Positives = 84/184 (45%)

Query:     1 SVCGTAVCQSVCGTAV-CQSVCGTAV-CQSVCGTAV-CQSV--CGTAVCQS-VCGTAVCQ 54
             S CG   C+  CG+   C+  CG+   C+  CG+   C S   C  + CQS  C    CQ
Sbjct:    55 SSCGG--CKGGCGSCGGCKGSCGSCGGCKGGCGSCGGCGSCGGCKPSCCQSSCCKPCCCQ 112

Query:    55 SVCGTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQS-VCGTAVCQS-VC 111
             S C    C S CG++ CQS  C    CQS C    C S CG++ CQS  C    CQS  C
Sbjct:   113 SSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCCKPCCSSGCGSSCCQSSCCKPCCCQSSCC 172

Query:   112 GTAVCQS-VCGTAVCQS-VCGTAVCQS-VCGTAVCQS-VCGTAVCQS-VCGTAVCQSVCG 166
                 CQS  C    CQS  C    CQS  C    CQS  C    CQS  C    CQS C 
Sbjct:   173 KPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCCKPCCCQSSCC 232

Query:   167 TAVC 170
               VC
Sbjct:   233 APVC 236

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005882 "intermediate filament" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0045095 "keratin filament" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
PF01500	164	Keratin_B2: Keratin, high sulfur B2 protein; Inter	99.42
PF01500	164	Keratin_B2: Keratin, high sulfur B2 protein; Inter	99.14
KOG4726|consensus	146		96.65
PF05287	180	PMG: PMG protein; InterPro: IPR007951 This family	81.54

>PF01500 Keratin_B2: Keratin, high sulfur B2 protein; InterPro: IPR002494 High sulphur proteins are cysteine-rich proteins synthesized during the differentiation of hair matrix cells, and form hair fibres in association with hair keratin intermediate filaments []

Probab=99.42  E-value=4.7e-13  Score=109.31  Aligned_cols=114  Identities=29%  Similarity=0.806  Sum_probs=65.5

Q ss_pred             CcccccccCCcCCcc-ccCCccccccCCCcccccccCcccccccc-CCC----C------CcccccCccceeecCCCCCc
Q psy3987          47 VCGTAVCQSVCGTAV-CQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVC----G------TAVCQSVCGTAVCQSVCGTA  114 (175)
Q Consensus        47 cC~p~cC~ssCc~~~-C~~sCc~p~C~~~C~~~cC~p~Cc~~~C~-s~C----~------~sCCqscC~p~cC~~tC~~p  114 (175)
                      +++|+++++++++|+ +++++++|.||+.++++++||+|++++++ +.+    +      .....-.++++|||++++.+
T Consensus        34 CCqpsccqtscCrP~cc~ssCcrP~CqpccqssCcqPsCcqpScCqtgCgi~~~~~~g~~~~~g~vs~r~r~CRP~cc~~  113 (164)
T PF01500_consen   34 CCQPSCCQTSCCRPSCCVSSCCRPICQPCCQSSCCQPSCCQPSCCQTGCGIGGGIGYGQEGGSGAVSCRTRWCRPDCCVP  113 (164)
T ss_pred             ccCCCccCCceeCCceecccccCcccccccCCcccCCccccccccccccccCCccccccccCcccccccceeeCCCcccc
Confidence            455666666666665 45677777766656666666666666543 333    1      11222358999999999888


Q ss_pred             -ccccCc-CCcccccCcCCCCCCC-CcCCccccCCcCccceeeccccccccCCcCCc
Q psy3987         115 -VCQSVC-GTAVCQSVCGTAVCQS-VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA  168 (175)
Q Consensus       115 -~C~~~C-~~~~C~ssC~~~vC~~-cC~~~~C~~~C~~~~C~~~C~~~~C~~~Cc~~  168 (175)
                       .++|.+ ++....++|    ||+ ..+.++||+.+    +.+.++||++.-.+.+|
T Consensus       114 ~~c~p~cC~~sC~~ptC----Cq~~~~qasCCRPs~----C~~scCRp~Cc~~c~~p  162 (164)
T PF01500_consen  114 GCCLPPCCVPSCCPPTC----CQLHHAQASCCRPSC----CGQSCCRPVCCCSCCEP  162 (164)
T ss_pred             CCcCCCeeecccCCCcc----ccccccccCccCccc----cCCCCCCcceeecccCC
Confidence             777777 333445555    654 22334444444    44444444444334444

This family has been divided up into four regions, with the second region containing 8 copies of a short repeat []. This family is also known as B2 or KAP1.; GO: 0045095 keratin filament

>PF01500 Keratin_B2: Keratin, high sulfur B2 protein; InterPro: IPR002494 High sulphur proteins are cysteine-rich proteins synthesized during the differentiation of hair matrix cells, and form hair fibres in association with hair keratin intermediate filaments []

Probab=99.14  E-value=1e-10  Score=95.76  Aligned_cols=56  Identities=34%  Similarity=0.985  Sum_probs=37.0

Q ss_pred             CCCceecCC-CCCCcc-CCCcccccccCCcCCccccCCccccccCCCcccccccCccccccc
Q psy3987          30 CGTAVCQSV-CGTAVC-QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC   89 (175)
Q Consensus        30 C~p~cc~s~-C~~scC-~~cC~p~cC~ssCc~~~C~~sCc~p~C~~~C~~~cC~p~Cc~~~C   89 (175)
                      ++|+++++. |+|+++ .++++|.++++++++|.|++ ++++++   ++|+++|++++++.+
T Consensus        25 cQpsCc~~sCCqpsccqtscCrP~cc~ssCcrP~Cqp-ccqssC---cqPsCcqpScCqtgC   82 (164)
T PF01500_consen   25 CQPSCCQPSCCQPSCCQTSCCRPSCCVSSCCRPICQP-CCQSSC---CQPSCCQPSCCQTGC   82 (164)
T ss_pred             ccCccCCCCccCCCccCCceeCCceecccccCccccc-ccCCcc---cCCcccccccccccc
Confidence            445545443 566666 44677888888888887766 666666   666666666666666

This family has been divided up into four regions, with the second region containing 8 copies of a short repeat []. This family is also known as B2 or KAP1.; GO: 0045095 keratin filament

>KOG4726|consensus

Probab=96.65  E-value=0.011  Score=48.01  Aligned_cols=11  Identities=27%  Similarity=1.041  Sum_probs=6.4

Q ss_pred             CccceeecCCC
Q psy3987         101 VCGTAVCQSVC  111 (175)
Q Consensus       101 cC~p~cC~~tC  111 (175)
                      .+...++++++
T Consensus        78 ~c~~~~C~~~c   88 (146)
T KOG4726|consen   78 CCRCGCCRPSC   88 (146)
T ss_pred             CCCCCccCCCc
Confidence            45555666655

>PF05287 PMG: PMG protein; InterPro: IPR007951 This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and PMG2)

Probab=81.54  E-value=8.6  Score=32.14  Aligned_cols=24  Identities=25%  Similarity=0.574  Sum_probs=13.2

Q ss_pred             CccccCCcC-ccceeeccccccccC
Q psy3987         140 TAVCQSVCG-TAVCQSVCGTAVCQS  163 (175)
Q Consensus       140 ~~~C~~~C~-~~~C~~~C~~~~C~~  163 (175)
                      +..|+++.. ...+++++++|+|.+
T Consensus       154 s~~CrP~~~~s~s~q~~c~~P~C~s  178 (180)
T PF05287_consen  154 SSSCRPSYFSSRSCQPSCYQPSCGS  178 (180)
T ss_pred             CCceecCccCcCCccCCccCCcccC
Confidence            334444443 445667777776654

PMG1 and 2 contain characteristic repeats reminiscent of the keratin-associated proteins (KAPs). Both genes are expressed in growing hair follicles in skin as well as in sebaceous and eccrine sweat glands. Interestingly, expression is also detected in the mammary epithelium where it is limited to the onset of the pubertal growth phase and is independent of ovarian hormones. Their broad, developmentally controlled expression pattern, together with their unique amino acid composition, demonstrate that pmg-1 and pmg-2 constitute a novel KAP gene family participating in the differentiation of all epithelial cells forming the epidermal appendages [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00