Psyllid ID: psy4156

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MVLSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAHG
Secondary Structure (PSIPRED)
cccccccEEEEEcccHHHHHHHHHHHcccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEccccccccccHHHHHHHHHccccccccccHHHHHcHHHHHHHHHHHHHHHcccccEEEEcccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccEEEEccHHEHHHHHHHHHHHccccccccccccEEEEEEEEcccEEcccccccccHHHHHHHHHHHHHHHHcccHHHccEEEEEccccccccccHHHHHHHHcccccccEEEEEEcHHHHHHHHHHHHHHHHHcccccEEEEcccccccccccc
Coil and Loop (DISEMBL)
mvlsdndvvivSGDVILLTIWFIFVTGftrstmvlsdndVVIVSAArtpigsflgslselkahdlgSTAIKEVLKRANVLPNEISEVILGQaltagqgqnparqasikanipnevpASLVNMLCgsglksvtlTSRQQVLLTLHwlgngaqyhitadahg
Flexible Loop (DISEMBL)
MVLSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAHG
Low Complexity Region (SEG)
MVLSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAHG
Disordered region (IsUnstruct)
******DVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT****************I*NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT*****
Disordered Region (DISOPRED)
***SDNDVVIVSGDVILLTIWFIF***************VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT*****
Disordered Region (DISEMBL)
MVLSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT**********ASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAHG
Disordered Region (DISPRO)
**LSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGA**********
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MVLSDNDVVIVSGDVILLTIWFIFVTGFTRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
P54810	391	Acetyl-CoA acetyltransfer	no	N/A	0.625	0.255	0.613	8e-29
Q8CAY6	397	Acetyl-CoA acetyltransfer	yes	N/A	0.65	0.261	0.596	7e-28
Q5XI22	397	Acetyl-CoA acetyltransfer	yes	N/A	0.65	0.261	0.596	7e-28
P14611	393	Acetyl-CoA acetyltransfer	yes	N/A	0.756	0.307	0.520	8e-28
Q9BWD1	397	Acetyl-CoA acetyltransfer	yes	N/A	0.631	0.254	0.613	2e-26
P45359	392	Acetyl-CoA acetyltransfer	no	N/A	0.618	0.252	0.555	1e-25
P50174	393	Acetyl-CoA acetyltransfer	yes	N/A	0.643	0.262	0.553	3e-25
P44873	393	Acetyl-CoA acetyltransfer	yes	N/A	0.612	0.249	0.571	8e-25
Q9ZHI1	392	Acetyl-CoA acetyltransfer	yes	N/A	0.612	0.25	0.551	2e-24
P45363	394	Acetyl-CoA acetyltransfer	N/A	N/A	0.612	0.248	0.545	3e-24

>sp|P54810|THIL_PARDE Acetyl-CoA acetyltransferase OS=Paracoccus denitrificans GN=phaA PE=3 SV=1

 Score =  125 bits (315), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 79/101 (78%), Gaps = 1/101 (0%)

Query: 41  VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQN 100
           VIVSAARTP+GSFLGS + L AH+LG+  +K V++RA + P+E+SE ILGQ LTA QGQN
Sbjct: 5   VIVSAARTPVGSFLGSFANLPAHELGAIVLKAVVERAGIDPSEVSETILGQVLTAAQGQN 64

Query: 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLL 141
           PARQA IK  +P E  A ++N +CGSGL++V L + QQVLL
Sbjct: 65  PARQAHIKVGLPRESAAWVINQVCGSGLRTVALAA-QQVLL 104

Paracoccus denitrificans (taxid: 266)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9

>sp|Q8CAY6|THIC_MOUSE Acetyl-CoA acetyltransferase, cytosolic OS=Mus musculus GN=Acat2 PE=1 SV=2

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 75/104 (72%)

Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           M    + VVIVSAART IGSF G+LS +  H++G+T IKEVL+RA V P E+SEVI G  
Sbjct: 1   MNAGSDPVVIVSAARTAIGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHV 60

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           LTAG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct: 61  LTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 104

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q5XI22|THIC_RAT Acetyl-CoA acetyltransferase, cytosolic OS=Rattus norvegicus GN=Acat2 PE=1 SV=1

 Score =  122 bits (307), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 62/104 (59%), Positives = 75/104 (72%)

Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           M    + VVI+SAART IGSF G+LS +  H+LG+T IKEVL+RA V P E+SEVI G  
Sbjct: 1   MNAGSDPVVIISAARTAIGSFNGALSTVPVHNLGTTVIKEVLQRAKVAPEEVSEVIFGHV 60

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           LTAG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct: 61  LTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 104

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P14611|THIL_CUPNH Acetyl-CoA acetyltransferase OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=phbA PE=3 SV=1

 Score =  122 bits (307), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 63/121 (52%), Positives = 84/121 (69%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           DVVIVSAART +G F GSL+++ A +LG+  IK  L+RA V P ++SEVI+GQ LTAG G
Sbjct: 3   DVVIVSAARTAVGKFGGSLAKIPAPELGAVVIKAALERAGVKPEQVSEVIMGQVLTAGSG 62

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA 158
           QNPARQA+IKA +P  VPA  +N +CGSGLK+V L +   +      +  G Q +++A  
Sbjct: 63  QNPARQAAIKAGLPAMVPAMTINKVCGSGLKAVMLAANAIMAGDAEIVVAGGQENMSAAP 122

Query: 159 H 159
           H
Sbjct: 123 H 123

Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (taxid: 381666)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q9BWD1|THIC_HUMAN Acetyl-CoA acetyltransferase, cytosolic OS=Homo sapiens GN=ACAT2 PE=1 SV=2

 Score =  118 bits (295), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 71/101 (70%)

Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           M    + VVIVSAART IGSF G+L+ +   DLGST IKEVLKRA V P ++SEVI G  
Sbjct: 1   MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHV 60

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           L AG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L
Sbjct: 61  LAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCL 101

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P45359|THLA_CLOAB Acetyl-CoA acetyltransferase OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=thlA PE=1 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 75/99 (75%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            +VVI SA RT IGS+  SL ++ A DLG+TAIKE +K+A + P +++EVILG  L AG 
Sbjct: 2   KEVVIASAVRTAIGSYGKSLKDVPAVDLGATAIKEAVKKAGIKPEDVNEVILGNVLQAGL 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           GQNPARQAS KA +P E+PA  +N +CGSGL++V+L ++
Sbjct: 62  GQNPARQASFKAGLPVEIPAMTINKVCGSGLRTVSLAAQ 100

Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) (taxid: 272562)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P50174|THIL_RHIME Acetyl-CoA acetyltransferase OS=Rhizobium meliloti (strain 1021) GN=phbA PE=3 SV=1

 Score =  114 bits (285), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 57/103 (55%), Positives = 74/103 (71%)

Query: 35  LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           +S+  +VI SAART +GSF G+     AH+LG+ AIK VL+RA V   E+ EVILGQ L 
Sbjct: 1   MSNPSIVIASAARTAVGSFNGAFGNTLAHELGAAAIKAVLERAGVEAGEVDEVILGQVLP 60

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           AG+GQNPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 61  AGEGQNPARQAAMKAGLPQEKTAWGMNQLCGSGLRAVALGMQQ 103

Rhizobium meliloti (strain 1021) (taxid: 266834)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P44873|ATOB_HAEIN Acetyl-CoA acetyltransferase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=atoB PE=3 SV=1

 Score =  112 bits (281), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/98 (57%), Positives = 74/98 (75%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           +VVIVSA RTPIGSF G+LS + A DLG+  I+E +KRAN+    ++EVI+G  L AG G
Sbjct: 3   NVVIVSAVRTPIGSFNGALSSVSAVDLGAIVIQEAIKRANIESALVNEVIMGNVLQAGLG 62

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           QNPARQA++KA I  E+P+  +N +CGSGLKSV L ++
Sbjct: 63  QNPARQAALKAGIEKEIPSLTINKVCGSGLKSVALGAQ 100

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|Q9ZHI1|THIL_CHRVO Acetyl-CoA acetyltransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=phaA PE=3 SV=2

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 75/98 (76%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           +V IV+A RT IGSF G L+++ A +LG+T IK +L++  V P ++SEVILGQ LTAG G
Sbjct: 2   EVAIVAAQRTAIGSFGGGLAKIPAPELGATVIKALLEKTGVKPEDVSEVILGQVLTAGSG 61

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           QNPARQA IKA +P   PA+ +N++CGSGL++V L ++
Sbjct: 62  QNPARQALIKAGLPVTTPATTLNVVCGSGLRAVHLAAQ 99

Involved in the production of polyhydroxyalkonic acids (PHAs), composed primarily of 3-hydroxybutyric acid (3HB) and 3-hydroxyvaleric acid (3HV).

Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) (taxid: 243365)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

>sp|P45363|THIL_THIVI Acetyl-CoA acetyltransferase OS=Thiocystis violacea GN=phbA PE=3 SV=1

 Score =  110 bits (276), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/99 (54%), Positives = 75/99 (75%), Gaps = 1/99 (1%)

Query: 35  LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           +SD  +VIV A RT IG+F G+LS L+A D+G+T +K +++R  + P ++SEVILGQ LT
Sbjct: 1   MSDT-IVIVDAGRTAIGTFGGALSALQATDIGTTVLKALIERTGIAPEQVSEVILGQVLT 59

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           AG GQNPARQ ++ A +P+ VPA  +N +CGSGLK+V L
Sbjct: 60  AGCGQNPARQTTLMAGLPHTVPAMTINKVCGSGLKAVHL 98

Thiocystis violacea (taxid: 13725)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
118794945	394	AGAP001318-PA [Anopheles gambiae str. PE	0.612	0.248	0.714	5e-33
340710557	394	PREDICTED: acetyl-CoA acetyltransferase,	0.606	0.246	0.721	9e-33
195441403	392	GK20386 [Drosophila willistoni] gi|19416	0.6	0.244	0.739	1e-32
170060190	393	acetyl-coA acetyl transferase II [Culex	0.6	0.244	0.729	2e-32
193702418	393	PREDICTED: acetyl-CoA acetyltransferase,	0.587	0.239	0.776	3e-32
194864803	392	GG14778 [Drosophila erecta] gi|190652898	0.6	0.244	0.729	4e-32
350427397	394	PREDICTED: acetyl-CoA acetyltransferase,	0.606	0.246	0.701	6e-32
24655093	392	CG9149 [Drosophila melanogaster] gi|2309	0.6	0.244	0.729	6e-32
195490351	392	GE21141 [Drosophila yakuba] gi|194179204	0.6	0.244	0.729	6e-32
195586883	392	GD13606 [Drosophila simulans] gi|1941952	0.6	0.244	0.729	6e-32

>gi|118794945|ref|XP_321828.3| AGAP001318-PA [Anopheles gambiae str. PEST] gi|116116539|gb|EAA01190.3| AGAP001318-PA [Anopheles gambiae str. PEST]

 Score =  145 bits (366), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/98 (71%), Positives = 84/98 (85%)

Query: 36  SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95
           S  +V IVSAARTPIG+F+G+L+ L A DLG+ A+KEVL+RA+V P ++SEVILGQALTA
Sbjct: 3   SAGEVFIVSAARTPIGNFMGTLASLSAADLGAVAVKEVLQRASVDPADVSEVILGQALTA 62

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQGQNPARQASIKA +P EVPA  +NMLCGSGLK+V L
Sbjct: 63  GQGQNPARQASIKAGVPKEVPAYNINMLCGSGLKTVAL 100

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340710557|ref|XP_003393854.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like [Bombus terrestris] gi|385258402|gb|AFI55097.1| acetyl-CoA acetyltransferase [Bombus terrestris]

 Score =  144 bits (364), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 70/97 (72%), Positives = 83/97 (85%)

Query: 35  LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           +S+NDVVI+SA RTPIGSF GSLS LKA DLGS  IKE L+RA++ P ++SEVILGQ LT
Sbjct: 1   MSNNDVVIISAVRTPIGSFCGSLSSLKASDLGSIVIKESLERAHIKPVDVSEVILGQVLT 60

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           AGQGQNPARQA++KA +P  VPA L+NMLCGSGLK+V
Sbjct: 61  AGQGQNPARQAAMKAGLPISVPAYLINMLCGSGLKAV 97

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195441403|ref|XP_002068499.1| GK20386 [Drosophila willistoni] gi|194164584|gb|EDW79485.1| GK20386 [Drosophila willistoni]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/96 (73%), Positives = 85/96 (88%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           +DV IVSAARTPIGSF G+LS+LKA DLGS  IKEVLKR+NV  ++++EVI+GQALTAGQ
Sbjct: 2   SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIKEVLKRSNVEAHQVNEVIMGQALTAGQ 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA +P +VPA  +NMLCGSGLK+VTL
Sbjct: 62  GQNPARQASLKAGLPIQVPAFNINMLCGSGLKTVTL 97

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|170060190|ref|XP_001865693.1| acetyl-coA acetyl transferase II [Culex quinquefasciatus] gi|167878700|gb|EDS42083.1| acetyl-coA acetyl transferase II [Culex quinquefasciatus]

 Score =  144 bits (362), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 80/96 (83%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            +V IVSAARTPIG+FLG+LS L A DLG+ AIKEVL RA V P ++ EVILGQALTAGQ
Sbjct: 5   EEVYIVSAARTPIGNFLGTLSSLSAADLGAVAIKEVLNRAGVPPADVDEVILGQALTAGQ 64

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA IP E PA L+N+LCGSGLK+V L
Sbjct: 65  GQNPARQASLKAGIPKEAPAYLINLLCGSGLKTVAL 100

Source: Culex quinquefasciatus

Species: Culex quinquefasciatus

Genus: Culex

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193702418|ref|XP_001945243.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like isoform 1 [Acyrthosiphon pisum] gi|328725197|ref|XP_003248382.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like isoform 2 [Acyrthosiphon pisum]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 73/94 (77%), Positives = 78/94 (82%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           N+V IVSA RTPIGSF GSLS LKAH LG   I EVLKRANV  NE+SEVILGQALTAGQ
Sbjct: 3   NEVYIVSAVRTPIGSFGGSLSSLKAHQLGCIVITEVLKRANVNSNEVSEVILGQALTAGQ 62

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           GQNPARQASI A IP  VPA ++NMLCGSGLK+V
Sbjct: 63  GQNPARQASINAGIPITVPAHVINMLCGSGLKAV 96

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194864803|ref|XP_001971115.1| GG14778 [Drosophila erecta] gi|190652898|gb|EDV50141.1| GG14778 [Drosophila erecta]

 Score =  142 bits (358), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           +DV IVSAARTPIGSF G+LS+LKA DLGS  I+EVL+RANV   E++EVILGQAL+AGQ
Sbjct: 2   SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVQGQEVNEVILGQALSAGQ 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA +P +VPA  +NMLCGSGLK+V L
Sbjct: 62  GQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVAL 97

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350427397|ref|XP_003494745.1| PREDICTED: acetyl-CoA acetyltransferase, cytosolic-like [Bombus impatiens]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 83/97 (85%)

Query: 35  LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           +S++DVVI+SA RTPIGSF GSLS LKA DLGS  IKE L+RA++ P ++SEVILGQ LT
Sbjct: 1   MSNSDVVIISAVRTPIGSFCGSLSSLKASDLGSIVIKESLERAHIKPVDVSEVILGQVLT 60

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           AGQGQNPARQA++KA +P  VPA L+NMLCGSGLK++
Sbjct: 61  AGQGQNPARQAAMKAGLPISVPAYLINMLCGSGLKAI 97

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|24655093|ref|NP_612094.2| CG9149 [Drosophila melanogaster] gi|23092751|gb|AAF47470.2| CG9149 [Drosophila melanogaster]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           +DV IVSAARTPIGSF G+LS+LKA DLGS  I+EVL+RANV   E++EVILGQAL+AGQ
Sbjct: 2   SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQ 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA +P +VPA  +NMLCGSGLK+V L
Sbjct: 62  GQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVAL 97

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195490351|ref|XP_002093103.1| GE21141 [Drosophila yakuba] gi|194179204|gb|EDW92815.1| GE21141 [Drosophila yakuba]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           +DV IVSAARTPIGSF G+LS+LKA DLGS  I+EVL+RANV   E++EVILGQAL+AGQ
Sbjct: 2   SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQ 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA +P +VPA  +NMLCGSGLK+V L
Sbjct: 62  GQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVAL 97

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195586883|ref|XP_002083197.1| GD13606 [Drosophila simulans] gi|194195206|gb|EDX08782.1| GD13606 [Drosophila simulans]

 Score =  142 bits (357), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           +DV IVSAARTPIGSF G+LS+LKA DLGS  I+EVL+RANV   E++EVILGQAL+AGQ
Sbjct: 2   SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQ 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQNPARQAS+KA +P +VPA  +NMLCGSGLK+V L
Sbjct: 62  GQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVAL 97

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
FB|FBgn0035203	392	CG9149 [Drosophila melanogaste	0.6	0.244	0.729	4.2e-31
UNIPROTKB|F1SB62	406	ACAT2 "Uncharacterized protein	0.65	0.256	0.634	8.2e-28
ZFIN|ZDB-GENE-990714-22	395	acat2 "acetyl-CoA acetyltransf	0.662	0.268	0.579	8.2e-28
UNIPROTKB|Q17QI3	397	ACAT2 "Uncharacterized protein	0.631	0.254	0.637	5.7e-27
UNIPROTKB|F1Q466	406	ACAT2 "Uncharacterized protein	0.65	0.256	0.615	5.7e-27
TIGR_CMR|CHY_1355	393	CHY_1355 "acetyl-CoA acetyltra	0.593	0.241	0.663	7.3e-27
MGI|MGI:87871	397	Acat2 "acetyl-Coenzyme A acety	0.65	0.261	0.596	1.9e-26
RGD|1359366	397	Acat2 "acetyl-CoA acetyltransf	0.65	0.261	0.596	1.9e-26
UNIPROTKB|F1NT20	445	ACAT2 "Uncharacterized protein	0.643	0.231	0.572	5.5e-26
UNIPROTKB|E1BV95	217	ACAT2 "Uncharacterized protein	0.618	0.456	0.595	6.6e-26

FB|FBgn0035203 CG9149 [Drosophila melanogaster (taxid:7227)]

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 70/96 (72%), Positives = 83/96 (86%)

Query:    38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
             +DV IVSAARTPIGSF G+LS+LKA DLGS  I+EVL+RANV   E++EVILGQAL+AGQ
Sbjct:     2 SDVFIVSAARTPIGSFNGTLSKLKASDLGSVVIQEVLRRANVEGQEVNEVILGQALSAGQ 61

Query:    98 GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
             GQNPARQAS+KA +P +VPA  +NMLCGSGLK+V L
Sbjct:    62 GQNPARQASLKAGLPIQVPAYGINMLCGSGLKTVAL 97

GO:0005829 "cytosol" evidence=ISS

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|F1SB62 ACAT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 66/104 (63%), Positives = 76/104 (73%)

Query:    33 MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
             M    + VVIVSAART IGSF G+LS +  HDLGST I+EVLKRANV P E+SEVI G  
Sbjct:    10 MSAGSDPVVIVSAARTVIGSFNGALSTVPVHDLGSTVIREVLKRANVDPKEVSEVIFGHV 69

Query:    93 LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             LTAG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct:    70 LTAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 113

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

ZFIN|ZDB-GENE-990714-22 acat2 "acetyl-CoA acetyltransferase 2" [Danio rerio (taxid:7955)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 62/107 (57%), Positives = 81/107 (75%)

Query:    35 LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
             ++ + +VIVSAARTPIG+F G+LS +  H+LG+  IK+VLKR NV P E+SEVI+G  LT
Sbjct:     1 MNTDAIVIVSAARTPIGAFNGTLSSVPLHELGTLVIKDVLKRVNVKPEEVSEVIMGHVLT 60

Query:    95 AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLL 141
             AG GQNPARQAS+ A +P  VPA    M+CGSGLKSV L + Q +++
Sbjct:    61 AGHGQNPARQASVGAGVPYSVPAWSCQMICGSGLKSVCLGA-QSIMM 106

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

UNIPROTKB|Q17QI3 ACAT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 65/102 (63%), Positives = 76/102 (74%)

Query:    36 SDND-VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
             +D+D VVIVSAART IGSF G+LS +  HDLGST I+EVLKRA V P E+SEVI G  L 
Sbjct:     3 ADSDPVVIVSAARTIIGSFNGALSTVPVHDLGSTVIREVLKRAAVAPEEVSEVIFGHVLA 62

Query:    95 AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             AG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct:    63 AGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 104

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

UNIPROTKB|F1Q466 ACAT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 64/104 (61%), Positives = 76/104 (73%)

Query:    33 MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
             M    + VVIVSAARTPIGSF G+L+ + AHDLGS+ IKEVL+RA V P E+SEVI G  
Sbjct:    10 MSAGSDPVVIVSAARTPIGSFNGALATVPAHDLGSSVIKEVLRRAAVAPEEVSEVIFGHV 69

Query:    93 LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             L AG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct:    70 LAAGCGQNPVRQASMGAGIPYAVPAWSCQMVCGSGLKAVCLAAQ 113

GO:0005739 "mitochondrion" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

TIGR_CMR|CHY_1355 CHY_1355 "acetyl-CoA acetyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 63/95 (66%), Positives = 72/95 (75%)

Query:    39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
             +VVIVSA RTPIGSFLGSL++  A DLG+  IKE L R N+ P  + EVI+G  L AG G
Sbjct:     3 EVVIVSAVRTPIGSFLGSLAQTPAVDLGALVIKESLNRINLAPRFVDEVIMGNVLQAGLG 62

Query:    99 QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
             QNPARQA+IKA IP EVPA  VN +CGSGLKSV L
Sbjct:    63 QNPARQAAIKAGIPQEVPAFTVNKVCGSGLKSVGL 97

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISS

GO:0006631 "fatty acid metabolic process" evidence=ISS

MGI|MGI:87871 Acat2 "acetyl-Coenzyme A acetyltransferase 2" [Mus musculus (taxid:10090)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 62/104 (59%), Positives = 75/104 (72%)

Query:    33 MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
             M    + VVIVSAART IGSF G+LS +  H++G+T IKEVL+RA V P E+SEVI G  
Sbjct:     1 MNAGSDPVVIVSAARTAIGSFNGALSTVPVHEMGTTVIKEVLQRAKVAPEEVSEVIFGHV 60

Query:    93 LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             LTAG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct:    61 LTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 104

GO:0003824 "catalytic activity" evidence=IEA

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

RGD|1359366 Acat2 "acetyl-CoA acetyltransferase 2" [Rattus norvegicus (taxid:10116)]

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 62/104 (59%), Positives = 75/104 (72%)

Query:    33 MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
             M    + VVI+SAART IGSF G+LS +  H+LG+T IKEVL+RA V P E+SEVI G  
Sbjct:     1 MNAGSDPVVIISAARTAIGSFNGALSTVPVHNLGTTVIKEVLQRAKVAPEEVSEVIFGHV 60

Query:    93 LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             LTAG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L ++
Sbjct:    61 LTAGCGQNPTRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAAQ 104

GO:0001889 "liver development" evidence=IEP

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=ISO;IDA

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0007420 "brain development" evidence=IEP

GO:0031670 "cellular response to nutrient" evidence=IEP

GO:0046952 "ketone body catabolic process" evidence=IEP

GO:0071398 "cellular response to fatty acid" evidence=IEP

UNIPROTKB|F1NT20 ACAT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 5.5e-26, P = 5.5e-26
 Identities = 59/103 (57%), Positives = 76/103 (73%)

Query:    31 STMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILG 90
             + + +S + +V V+A RT IGSF G+LS L AH+LG+  I+E L+RA + P E+SEV+LG
Sbjct:    48 AAIAMSADPIVFVAAVRTAIGSFNGALSALPAHELGAAVIREALRRAGLGPEEVSEVVLG 107

Query:    91 QALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
             Q LTAG GQNPARQAS+ A IP  VPA    M+CGSGLK+V L
Sbjct:   108 QVLTAGAGQNPARQASVGAGIPYSVPAWSCQMICGSGLKAVCL 150

GO:0003985 "acetyl-CoA C-acetyltransferase activity" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E1BV95 ACAT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 59/99 (59%), Positives = 74/99 (74%)

Query:    35 LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
             +S + +V V+A RT IGSF G+LS L AH+LG+  I+E L+RA + P E+SEV+LGQ LT
Sbjct:     1 MSADPIVFVAAVRTAIGSFNGALSALPAHELGAAVIREALRRAGLGPEEVSEVVLGQVLT 60

Query:    95 AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
             AG GQNPARQAS+ A IP  VPA    M+CGSGLK+V L
Sbjct:    61 AGAGQNPARQASVGAGIPYSVPAWSCQMICGSGLKAVCL 99

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P46707	FADA4_MYCLE	2, ., 3, ., 1, ., 9	0.5104	0.6	0.2442	yes	N/A
P50174	THIL_RHIME	2, ., 3, ., 1, ., 9	0.5533	0.6437	0.2620	yes	N/A
Q9BWD1	THIC_HUMAN	2, ., 3, ., 1, ., 9	0.6138	0.6312	0.2544	yes	N/A
Q6GJW4	THLA_STAAR	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q9I2A8	ATOB_PSEAE	2, ., 3, ., 1, ., 9	0.5252	0.6187	0.2519	yes	N/A
Q2YVF5	THLA_STAAB	2, ., 3, ., 1, ., 9	0.5212	0.5875	0.2391	yes	N/A
P44873	ATOB_HAEIN	2, ., 3, ., 1, ., 9	0.5714	0.6125	0.2493	yes	N/A
P14611	THIL_CUPNH	2, ., 3, ., 1, ., 9	0.5206	0.7562	0.3078	yes	N/A
Q99WM3	THLA_STAAM	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q9ZHI1	THIL_CHRVO	2, ., 3, ., 1, ., 9	0.5510	0.6125	0.25	yes	N/A
Q2G124	THLA_STAA8	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q7A7L2	THLA_STAAN	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q5HS07	THLA_STAEQ	2, ., 3, ., 1, ., 9	0.5052	0.5937	0.2411	yes	N/A
P45369	THIL_ALLVD	2, ., 3, ., 1, ., 9	0.5360	0.6062	0.2461	yes	N/A
Q6GCB8	THLA_STAAS	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q8S4Y1	THIC1_ARATH	2, ., 3, ., 1, ., 9	0.5408	0.6125	0.2431	yes	N/A
Q5XI22	THIC_RAT	2, ., 3, ., 1, ., 9	0.5961	0.65	0.2619	yes	N/A
Q18AR0	THLA_CLOD6	2, ., 3, ., 1, ., 9	0.5408	0.6125	0.2506	yes	N/A
Q8CQN7	THLA_STAES	2, ., 3, ., 1, ., 9	0.5052	0.5937	0.2411	yes	N/A
Q8CAY6	THIC_MOUSE	2, ., 3, ., 1, ., 9	0.5961	0.65	0.2619	yes	N/A
Q5HIU0	THLA_STAAC	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A
Q8NY95	THLA_STAAW	2, ., 3, ., 1, ., 9	0.5319	0.5875	0.2391	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	160
PRK05790	393	PRK05790, PRK05790, putative acyltransferase; Prov	9e-51
pfam00108	262	pfam00108, Thiolase_N, Thiolase, N-terminal domain	2e-45
cd00751	386	cd00751, thiolase, Thiolase are ubiquitous enzymes	5e-43
PLN02644	394	PLN02644, PLN02644, acetyl-CoA C-acetyltransferase	4e-36
PRK08235	393	PRK08235, PRK08235, acetyl-CoA acetyltransferase;	8e-35
TIGR01930	386	TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltrans	5e-34
PRK05656	393	PRK05656, PRK05656, acetyl-CoA acetyltransferase;	1e-33
PRK06954	397	PRK06954, PRK06954, acetyl-CoA acetyltransferase;	4e-26
COG0183	392	COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid	6e-26
PRK06366	388	PRK06366, PRK06366, acetyl-CoA acetyltransferase;	4e-24
PRK06633	392	PRK06633, PRK06633, acetyl-CoA acetyltransferase;	4e-24
PRK09051	394	PRK09051, PRK09051, beta-ketothiolase; Provisional	3e-23
PRK07661	391	PRK07661, PRK07661, acetyl-CoA acetyltransferase;	5e-20
PRK09050	401	PRK09050, PRK09050, beta-ketoadipyl CoA thiolase;	5e-20
cd00826	393	cd00826, nondecarbox_cond_enzymes, nondecarboxylat	3e-19
TIGR02430	400	TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase	3e-19
PRK06205	404	PRK06205, PRK06205, acetyl-CoA acetyltransferase;	4e-19
PRK13359	400	PRK13359, PRK13359, beta-ketoadipyl CoA thiolase;	9e-18
PRK08947	387	PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed	2e-16
PRK07108	392	PRK07108, PRK07108, acetyl-CoA acetyltransferase;	2e-16
PLN02287	452	PLN02287, PLN02287, 3-ketoacyl-CoA thiolase	8e-16
PRK08131	401	PRK08131, PRK08131, acetyl-CoA acetyltransferase;	7e-15
PRK07850	387	PRK07850, PRK07850, acetyl-CoA acetyltransferase;	2e-14
PRK09052	399	PRK09052, PRK09052, acetyl-CoA acetyltransferase;	1e-13
PRK07801	382	PRK07801, PRK07801, acetyl-CoA acetyltransferase;	7e-13
TIGR02445	385	TIGR02445, fadA, fatty oxidation complex, beta sub	8e-13
PRK07851	406	PRK07851, PRK07851, acetyl-CoA acetyltransferase;	3e-12
PRK06690	361	PRK06690, PRK06690, acetyl-CoA acetyltransferase;	2e-11
PRK08242	402	PRK08242, PRK08242, acetyl-CoA acetyltransferase;	3e-10
PRK06504	390	PRK06504, PRK06504, acetyl-CoA acetyltransferase;	1e-09
PRK06445	394	PRK06445, PRK06445, acetyl-CoA acetyltransferase;	1e-09
PRK08963	428	PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed	2e-07
PRK08170	426	PRK08170, PRK08170, acetyl-CoA acetyltransferase;	3e-07
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	7e-07
TIGR02446	430	TIGR02446, FadI, fatty oxidation complex, beta sub	5e-05
PRK06025	417	PRK06025, PRK06025, acetyl-CoA acetyltransferase;	1e-04

>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional

 Score =  166 bits (422), Expect = 9e-51
 Identities = 58/100 (58%), Positives = 75/100 (75%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            DVVIVSAARTPIG F G+L ++ A +LG+  IK  L+RA V P ++ EVI+GQ L AG 
Sbjct: 2   KDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGA 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           GQNPARQA++KA +P EVPA  +N +CGSGLK+V L ++ 
Sbjct: 62  GQNPARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQA 101

Length = 393

>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain

 Score =  149 bits (378), Expect = 2e-45
 Identities = 62/95 (65%), Positives = 75/95 (78%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           DVVIVSAARTPIGSF GSL +L A DLG+ AIK  L+RA V P ++ EVI+G  L AG+G
Sbjct: 1   DVVIVSAARTPIGSFGGSLKDLSAVDLGAIAIKAALERAGVKPEDVDEVIMGNVLQAGEG 60

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           QNPARQA++KA IP+ VPA  +N +CGSGLK+V L
Sbjct: 61  QNPARQAALKAGIPDSVPAVTINKVCGSGLKAVAL 95

Thiolase is reported to be structurally related to beta-ketoacyl synthase (pfam00109), and also chalcone synthase. Length = 262

>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score =  146 bits (370), Expect = 5e-43
 Identities = 52/93 (55%), Positives = 70/93 (75%)

Query: 41  VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQN 100
           VIVSA RTPIG F G+L ++ A DLG+  IK +L+RA + P E+ +VI+G  L AG+GQN
Sbjct: 1   VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQN 60

Query: 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           PARQA++ A +P  VPA+ VN +CGSGL++V L
Sbjct: 61  PARQAALLAGLPESVPATTVNRVCGSGLQAVAL 93

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 386

>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase

 Score =  128 bits (323), Expect = 4e-36
 Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 1/106 (0%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           DV IV  ARTPIG FLGSLS L A +LGS AI+  L+RA V P  + EV  G  L+A  G
Sbjct: 2   DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLG 61

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLH 144
           Q PARQA++ A +P     + VN +C SG+K+V L + Q + L ++
Sbjct: 62  QAPARQAALGAGLPPSTICTTVNKVCASGMKAVMLAA-QSIQLGIN 106

Length = 394

>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional

 Score =  124 bits (314), Expect = 8e-35
 Identities = 54/93 (58%), Positives = 66/93 (70%)

Query: 41  VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQN 100
           VIVSAARTP G F GSL ++KA +LG  AIKE L+RANV   ++ EVI+G  L  GQGQ 
Sbjct: 5   VIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQI 64

Query: 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           P+RQA+  A IP EV    VN +C SGL++VTL
Sbjct: 65  PSRQAARAAGIPWEVQTETVNKVCASGLRAVTL 97

Length = 393

>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases

 Score =  122 bits (308), Expect = 5e-34
 Identities = 49/92 (53%), Positives = 63/92 (68%)

Query: 42  IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNP 101
           IV+AARTPIG F GSL ++ A DLG+  IKE+L+R  + P  I +VI G  L AG+ QN 
Sbjct: 1   IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNI 60

Query: 102 ARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           ARQA++ A +P  VPA  VN  C SGL++V L
Sbjct: 61  ARQAALLAGLPESVPAYTVNRQCASGLQAVIL 92

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatty acid oxidation [Fatty acid and phospholipid metabolism, Other]. Length = 386

>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional

 Score =  121 bits (305), Expect = 1e-33
 Identities = 54/99 (54%), Positives = 75/99 (75%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            DVVIV+A RT IGSF GSL+ + A +LG+  I+ +L++  + P ++ EVILGQ LTAG 
Sbjct: 2   QDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGA 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           GQNPARQA+IKA +P+ VPA  +N +CGSGLK++ L ++
Sbjct: 62  GQNPARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQ 100

Length = 393

>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional

 Score =  101 bits (253), Expect = 4e-26
 Identities = 43/91 (47%), Positives = 62/91 (68%)

Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAARTP+ +F G  + L A  LG+ AI   ++RA + P +I EV++G  L AGQGQ
Sbjct: 9   IVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQ 68

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKS 130
            PARQA++ A +P  V  + VN +CGSG+++
Sbjct: 69  APARQAALGAGLPLSVGCTTVNKMCGSGMRA 99

Length = 397

>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism]

 Score =  100 bits (252), Expect = 6e-26
 Identities = 51/101 (50%), Positives = 62/101 (61%), Gaps = 4/101 (3%)

Query: 37  DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKR--ANVLPNEISEVILGQAL 93
             DV IV A RTP G F  GSL+EL A  LG+  I   L+R  A+V   ++ +VILG  L
Sbjct: 1   MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVL 60

Query: 94  TAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
            AG QGQN ARQA++ A +P  VPA  VN  C SGL +V L
Sbjct: 61  QAGEQGQNIARQAALAAGLPGSVPAVTVNRACASGLAAVRL 101

Length = 392

>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional

 Score = 95.8 bits (238), Expect = 4e-24
 Identities = 47/103 (45%), Positives = 63/103 (61%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            DV IVSA RT IG F  S S++KA  LG  AIK V+  A + P  + EVI+G  + AG 
Sbjct: 2   KDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGV 61

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVL 140
           GQNPA QA+  A +P  V    VN++C SG+ +V   +R+ +L
Sbjct: 62  GQNPAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIML 104

Length = 388

>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional

 Score = 95.9 bits (238), Expect = 4e-24
 Identities = 54/121 (44%), Positives = 72/121 (59%)

Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           V I  A RT  GSF+GSLS   A  L +  IK++L+ + + P  ++EVILGQ +T G GQ
Sbjct: 5   VYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQ 64

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAH 159
           NPARQ  I A IP EVP   +N +CGSGLKSV L +   +      +  G Q +++   H
Sbjct: 65  NPARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMH 124

Query: 160 G 160
           G
Sbjct: 125 G 125

Length = 392

>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional

 Score = 93.9 bits (234), Expect = 3e-23
 Identities = 44/107 (41%), Positives = 68/107 (63%), Gaps = 2/107 (1%)

Query: 36  SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQAL-T 94
              +VV+VS  RT IG+F GSL ++   DLG+T ++E L RA V P+++  V+ G  + T
Sbjct: 1   MMREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPT 60

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLL 141
             +    +R A+I A +P E PA  VN LCGSGL+++ +++ Q +LL
Sbjct: 61  EPRDMYLSRVAAINAGVPQETPAFNVNRLCGSGLQAI-VSAAQAILL 106

Length = 394

>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional

 Score = 84.8 bits (210), Expect = 5e-20
 Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 2/93 (2%)

Query: 41  VIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQAL-TAGQG 98
           VIV+ ARTP+G +  GSL  ++  DLG+  +KE LKRA      I ++I+G A+  A QG
Sbjct: 5   VIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQG 64

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            N AR     A +P  VPA  +N  C SGL+S+
Sbjct: 65  LNMARNIGALAGLPYTVPAITINRYCSSGLQSI 97

Length = 391

>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated

 Score = 84.6 bits (210), Expect = 5e-20
 Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG 96
            +  I  A RTPIG + G+LS ++A DLG+  +K ++ R   V    + +VI G A  AG
Sbjct: 2   TEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAG 61

Query: 97  Q-GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           +  +N AR +++ A +P  VP + +N LCGSG+ +V   +R 
Sbjct: 62  EDNRNVARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARA 103

Length = 401

>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

 Score = 82.5 bits (203), Expect = 3e-19
 Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 43  VSAARTPIGSFLGSLSELK---AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
             AA T  G F G         AH+ G+ AI   L+ A V    + E  LGQ L AG+GQ
Sbjct: 1   AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQ 60

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           N A+QA++ A    E PA  +N LCGSGL+++ L  + 
Sbjct: 61  NCAQQAAMHAGGLQEAPAIGMNNLCGSGLRALALAMQL 98

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways. Length = 393

>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase

 Score = 82.5 bits (204), Expect = 3e-19
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 2/101 (1%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG 96
            +  I  A RTPIG + GSLS ++A DL +  IK +L R   +    I +VI G A  AG
Sbjct: 1   REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAG 60

Query: 97  Q-GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           +  +N AR A++ A +P  VP + VN LCGSGL ++ + +R
Sbjct: 61  EDNRNVARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAAR 101

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid. Length = 400

>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional

 Score = 82.3 bits (204), Expect = 4e-19
 Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 1/101 (0%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           D VI    RTP+G F G+  ++ A +L +T I+ +++R  + P  I +VI GQ    G+ 
Sbjct: 3   DAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEA 62

Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139
               R A++ A +P  VP   ++  CGSGL++V +T+  QV
Sbjct: 63  PAIGRVAALDAGLPVTVPGMQLDRRCGSGLQAV-ITAAMQV 102

Length = 404

>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional

 Score = 78.7 bits (194), Expect = 9e-18
 Identities = 40/100 (40%), Positives = 63/100 (63%), Gaps = 2/100 (2%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ 97
           +  I  A RTPIG + G+LS ++A DLG+  +K +++R  +V    I +VI G A  AG+
Sbjct: 3   EAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGE 62

Query: 98  -GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             +N AR + + A +P+ VP S +N LCGSG+ +V + +R
Sbjct: 63  DNRNVARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAAR 102

Length = 400

>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 42/94 (44%), Positives = 56/94 (59%), Gaps = 7/94 (7%)

Query: 38  NDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILG---QA 92
            DVVIV A RTP+G S  G+   ++A DL +  ++ +L R   + P EI ++I G   Q 
Sbjct: 2   EDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQT 61

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGS 126
           L   QG N AR A++ A IP+ VPA  VN LCGS
Sbjct: 62  LE--QGFNIARNAALLAGIPHSVPAVTVNRLCGS 93

Length = 387

>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional

 Score = 74.4 bits (183), Expect = 2e-16
 Identities = 37/102 (36%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 38  NDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG 96
            + VIVS ARTP+  S+ G+ +      LG   ++  ++RA + P E+ +VI+G A   G
Sbjct: 2   TEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEG 61

Query: 97  -QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
             G N ARQ +++A +P  VP   VN  C SGL+++ L +++
Sbjct: 62  ATGANIARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQR 103

Length = 392

>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase

 Score = 73.3 bits (180), Expect = 8e-16
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 2/101 (1%)

Query: 33  MVLSDNDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQ 91
                +DVVIV+A RTPI  +  G   +    DL +  +K V+++  + P+E+ ++++G 
Sbjct: 41  TTAFGDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGT 100

Query: 92  ALTAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            L  G Q  N  R A+  A  P  VP   VN  C SGL++V
Sbjct: 101 VLAPGSQRANECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 141

Length = 452

>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional

 Score = 70.2 bits (172), Expect = 7e-15
 Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 1/99 (1%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ- 97
           D  I    R+P G   G+L+ ++  DL +T I+ +L+++    ++I +VILG    AG+ 
Sbjct: 3   DAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGED 62

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
            +N AR A + A +P  VP   VN LC SGL +V   +R
Sbjct: 63  SRNVARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAAR 101

Length = 401

>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 1/94 (1%)

Query: 41  VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQ 99
           VIV A RTPIG   G LS L A +L     + VL RA + P ++ +VI G    AG Q  
Sbjct: 5   VIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSN 64

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           N  R A + A +P  V A+ ++  CGS  ++  L
Sbjct: 65  NITRTAWLHAGLPYHVGATTIDCQCGSAQQANHL 98

Length = 387

>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional

 Score = 66.6 bits (163), Expect = 1e-13
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 39  DVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQAL-TA 95
           D  IV+A RTP+G +  G     +  DL +  ++  + +   + P  I + I+G A+  A
Sbjct: 7   DAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEA 66

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            QG N AR  ++ A +PN V    VN  C SGL++V
Sbjct: 67  EQGLNVARIGALLAGLPNSVGGVTVNRFCASGLQAV 102

Length = 399

>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional

 Score = 64.3 bits (157), Expect = 7e-13
 Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)

Query: 42  IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQN 100
           IV A RTP+G   G L+ +   DLG+  +K ++ R  + P  + +VI G   T G Q  N
Sbjct: 6   IVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGN 65

Query: 101 PARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            AR + + A +P EVP   V+  CGS  +++
Sbjct: 66  IARTSWLAAGLPEEVPGVTVDRQCGSSQQAI 96

Length = 382

>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA

 Score = 64.6 bits (157), Expect = 8e-13
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 39  DVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQA-LTA 95
           DVVIV   RTP+G S  G+    +A DL +  + ++L R   V P E+ ++  G    T 
Sbjct: 1   DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTL 60

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
            QG N AR A++ A IP+   A  VN LCGS ++++   +R
Sbjct: 61  EQGFNIARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAAR 101

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 385

>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional

 Score = 62.7 bits (153), Expect = 3e-12
 Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)

Query: 39  DVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVL-PNEISEVILGQALTAG 96
           + VIVS AR+PIG +F GSL +++  DL +  ++  L +   L P +I +++LG  L  G
Sbjct: 3   EAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGG 62

Query: 97  -QGQNPARQASIKANIPNEVPASLVNMLCGSGLKS 130
            QG N AR  ++       +P + VN  C S L++
Sbjct: 63  EQGFNMARVVAVLLGYDF-LPGTTVNRYCSSSLQT 96

Length = 406

>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           N  VIV A RTPIG   G L + +   L +  +  + K    +  EI +VILG  +  G 
Sbjct: 1   NRAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSKG---MEREIDDVILGNVV--GP 55

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           G N AR ++++A +   +P   ++  CG+GL+++
Sbjct: 56  GGNVARLSALEAGLGLHIPGVTIDRQCGAGLEAI 89

Length = 361

>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 39  DVVIVSAARTPIGSFL--GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG 96
           +  I  A RTP G     GSL E+K   L +  ++ +  R  +    + +V+LG     G
Sbjct: 3   EAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVG 62

Query: 97  -QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139
            QG + AR A + A +P  VP   +N  C SGL++V L +  +V
Sbjct: 63  DQGADIARTAVLAAGLPETVPGVQINRFCASGLEAVNLAA-AKV 105

Length = 402

>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 42  IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQN 100
           IV+AART  G   G L+     DL +  +  ++ R+   P  I +VI+G     G Q  N
Sbjct: 6   IVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATN 65

Query: 101 PARQASIKANIPNEVPASLVNMLCGS 126
            AR A + + +P  VP + ++  CGS
Sbjct: 66  VARNAVLASKLPESVPGTSIDRQCGS 91

Length = 390

>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 39  DVVIVSAARTPIGSFLGSLSE------LKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           DV +V  ART    F     +      ++  +L +  I  ++++  + P EI ++I G A
Sbjct: 3   DVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCA 62

Query: 93  LTAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVT 132
           L  G       R     A +P  +PA  V+  C S L +V+
Sbjct: 63  LQVGENWLYGGRHPIFLARLPYNIPAMAVDRQCASSLTTVS 103

Length = 394

>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed

 Score = 49.2 bits (118), Expect = 2e-07
 Identities = 24/93 (25%), Positives = 43/93 (46%)

Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           + IVS  RTP      +   + A DLG   + E+L R+ + P  I +++ GQ +   +  
Sbjct: 7   IAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAP 66

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVT 132
           N AR+  +   +     A  V+  C +  ++V 
Sbjct: 67  NIAREIVLGTGMNVHTDAYSVSRACATSFQAVA 99

Length = 428

>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional

 Score = 48.1 bits (115), Expect = 3e-07
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 39  DVVIVSAARTPIGSFL---GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95
            V IV  ARTP   FL   G      A DL   A + +L R    P+++ EVILG A+ +
Sbjct: 4   PVYIVDGARTP---FLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPS 60

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
               N AR  +++     +VPA  V   C SG++++
Sbjct: 61  PDEANIARVVALRLGCGEKVPAWTVQRNCASGMQAL 96

Length = 426

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 47.1 bits (112), Expect = 7e-07
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 62  AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN 121
           A +LG  A ++ +  A +    I  VI+G    +G+    A Q +    I    PA  VN
Sbjct: 7   ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN 65

Query: 122 MLCGSGLKSVTLTSRQ 137
             C +GL ++ L  +Q
Sbjct: 66  QACATGLTALALAVQQ 81

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 23/92 (25%), Positives = 41/92 (44%)

Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           + IV+  RTP      +   + A DLG   + E+L R+ + P  I +++ GQ +   +  
Sbjct: 9   IAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAP 68

Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           N AR+  +   +     A  V   C +  +S 
Sbjct: 69  NIAREIVLGTGMNVHTDAYSVTRACATSFQSA 100

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli [Fatty acid and phospholipid metabolism, Degradation]. Length = 430

>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional

 Score = 40.9 bits (96), Expect = 1e-04
 Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 39  DVVIVSAARTP--IGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95
           +  I+ A RTP  IG    G+L+ L    L +T +K + +R  +   ++ ++I   +   
Sbjct: 3   EAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQR 62

Query: 96  G-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           G QG +  R A++ A    +     ++  CG G+ SV L + Q
Sbjct: 63  GKQGGDLGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQ 105

Length = 417

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	100.0
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.97
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.97
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.96
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.96
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.96
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.96
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.96
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.96
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.96
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.95
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.95
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.95
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.95
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.95
KOG1390|consensus	396		99.95
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.95
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.95
PRK09051	394	beta-ketothiolase; Provisional	99.95
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.95
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.94
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.94
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.94
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.94
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.94
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.94
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.93
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.93
PLN02287	452	3-ketoacyl-CoA thiolase	99.92
PLN02644	394	acetyl-CoA C-acetyltransferase	99.92
PRK05790	393	putative acyltransferase; Provisional	99.92
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.91
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.91
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.91
KOG1389|consensus	435		99.91
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.91
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.89
KOG1391|consensus	396		99.89
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.88
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.87
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.87
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.86
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.86
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.86
PRK06059	399	lipid-transfer protein; Provisional	99.85
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.84
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.83
KOG1392|consensus	465		99.8
PRK08256	391	lipid-transfer protein; Provisional	99.79
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.78
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.77
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.77
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.76
PRK06158	384	thiolase; Provisional	99.73
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	99.73
KOG1406|consensus	408		99.7
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.7
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	99.67
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.67
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.66
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.64
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	99.64
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	99.64
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.63
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	99.63
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.63
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	99.62
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.6
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.6
PRK07855	386	lipid-transfer protein; Provisional	99.6
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.58
PRK07937	352	lipid-transfer protein; Provisional	99.57
PRK04262	347	hypothetical protein; Provisional	99.57
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.55
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.53
PRK06840	339	hypothetical protein; Validated	99.52
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.49
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	99.46
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	99.45
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	99.44
PRK08304	337	stage V sporulation protein AD; Validated	99.43
PLN03168	389	chalcone synthase; Provisional	99.38
PLN02577	459	hydroxymethylglutaryl-CoA synthase	99.38
PLN03169	391	chalcone synthase family protein; Provisional	99.36
PLN03171	399	chalcone synthase-like protein; Provisional	99.36
PLN02932	478	3-ketoacyl-CoA synthase	99.35
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	99.35
PLN02377	502	3-ketoacyl-CoA synthase	99.29
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	99.27
PLN03170	401	chalcone synthase; Provisional	99.26
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	99.26
PRK12404	334	stage V sporulation protein AD; Provisional	99.25
PLN02192	511	3-ketoacyl-CoA synthase	99.25
PLN03173	391	chalcone synthase; Provisional	99.25
PLN03172	393	chalcone synthase family protein; Provisional	99.25
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	99.23
PLN02854	521	3-ketoacyl-CoA synthase	99.16
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.13
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	99.11
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	99.01
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	99.0
PLN00415	466	3-ketoacyl-CoA synthase	98.99
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	98.96
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	98.93
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.87
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.85
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.76
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	98.75
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	98.74
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	98.74
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	98.7
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	98.66
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	98.65
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.62
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.5
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	98.49
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.48
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	98.47
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	98.45
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.44
cd00832	399	CLF Chain-length factor (CLF) is a factor required	98.44
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	98.34
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	98.32
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.21
COG3321	1061	Polyketide synthase modules and related proteins [	98.13
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	97.98
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.95
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	97.87
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	97.76
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	97.72
KOG1394|consensus	440		97.58
KOG1393|consensus	462		95.28
KOG1202|consensus	2376		95.23
PRK08257	498	acetyl-CoA acetyltransferase; Validated	92.56
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	91.77
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	90.42
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	89.22
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	87.64
COG1214	220	Inactive homolog of metal-dependent proteases, put	87.32
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	87.3
TIGR03285	445	methan_mark_14 putative methanogenesis marker prot	87.28
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	86.84
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	86.74
PRK09604	332	UGMP family protein; Validated	86.43
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	86.29
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	85.72
PRK06158	384	thiolase; Provisional	85.5
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	85.4
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	85.33
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	83.48
PF09887	448	DUF2114: Uncharacterized protein conserved in arch	83.37
PRK07937	352	lipid-transfer protein; Provisional	83.29
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	83.04
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	81.6
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	81.36
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	81.29
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	81.27
TIGR03725	202	bact_YeaZ universal bacterial protein YeaZ. This f	80.94
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	80.7

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=100.00  E-value=2.6e-33  Score=231.56  Aligned_cols=122  Identities=40%  Similarity=0.602  Sum_probs=110.6

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+++.|||||++.|.|++.++.||+.++++++|++++|+|++||.+++||+.+...+++++|.+++.+|||.++|
T Consensus         1 M~~v~Iv~a~RTPfg~~~G~l~~~~~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp   80 (264)
T PF00108_consen    1 MRDVVIVGAVRTPFGKFGGSLADVSPEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVP   80 (264)
T ss_dssp             -TTEEEEEEEEE--ECTTSTTTTS-HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSE
T ss_pred             CCCEEEEEeeeCccccCCCccCCCCHHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccc
Confidence            78999999999999999999999999999999999999999999999999999999987778899999999999998999


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      +++||++|+||++|+++|+..|++|.+|++|++|+||||...
T Consensus        81 ~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~p  122 (264)
T PF00108_consen   81 ATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRVP  122 (264)
T ss_dssp             EEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTSC
T ss_pred             eeeehhhhhHHHHHHHHhhhhhcCCCccEEEEeccccccccc
Confidence            999999999999999999999999999999999999999864

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.97  E-value=1e-30  Score=228.45  Aligned_cols=122  Identities=23%  Similarity=0.375  Sum_probs=116.6

Q ss_pred             CCceEEEeeeecccc--c-cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCC
Q psy4156          37 DNDVVIVSAARTPIG--S-FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIP  112 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg--~-~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp  112 (160)
                      |+++||+++.|||||  + ++|.|++.++.||+..+++++|+|++++|++||+|++||+.+.+. ++|++|++++.+|||
T Consensus         1 m~~vvIv~~~RTp~g~~~~~~G~l~~~~~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp   80 (417)
T PRK06025          1 MAEAYIIDAVRTPRGIGKVGKGALAHLHPQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYD   80 (417)
T ss_pred             CCceEEEeeccCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCC
Confidence            468999999999999  8 589999999999999999999999999999999999999988774 789999999999999


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      .++|+++|||+|+||++|+.+|+++|++|..+++|+||+|+||+..
T Consensus        81 ~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P  126 (417)
T PRK06025         81 IKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTA  126 (417)
T ss_pred             CCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCc
Confidence            9999999999999999999999999999999999999999999754

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.97  E-value=7.8e-30  Score=221.96  Aligned_cols=122  Identities=34%  Similarity=0.518  Sum_probs=115.2

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~  114 (160)
                      |++|||+|+.|||||+++|.+++.+++||+.++++++|+| ++|+|++||.+++||+.+.+. +++++|.+++.+|||.+
T Consensus         1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~   80 (400)
T PRK13359          1 MTEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHG   80 (400)
T ss_pred             CCcEEEEeccCCCccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCC
Confidence            4679999999999999999999999999999999999997 599999999999999987664 68899999999999978


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      +|+++||++|+||++|+.+|+++|++|..|++|++|+||||...
T Consensus        81 vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p  124 (400)
T PRK13359         81 VPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAP  124 (400)
T ss_pred             CceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCc
Confidence            99999999999999999999999999999999999999999753

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=2.1e-29  Score=218.67  Aligned_cols=121  Identities=26%  Similarity=0.381  Sum_probs=114.1

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v  115 (160)
                      |++|||+|++||||++++|.+++.+++||+.+|++++|+|++++|++||.+++||+.+.+ ++++++|...+..|||.++
T Consensus         1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~v   80 (390)
T PRK06504          1 MAEAYIVAAARTAGGRKGGRLAGWHPADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESV   80 (390)
T ss_pred             CCceEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence            468999999999999999999999999999999999999999999999999999998654 3578999999999998899


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++||++|+||++|+..|+++|++|.+|+++++|+||||..
T Consensus        81 P~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvLagGvEsmS~~  122 (390)
T PRK06504         81 PGTSIDRQCGSSQQALHFAAQAVMSGTMDIVIAAGVESMTRV  122 (390)
T ss_pred             ceEEEechhhHHHHHHHHHHHHHHCCCCCEEEEeeeeecCCC
Confidence            999999999999999999999999999999999999999953

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=2.5e-29  Score=217.80  Aligned_cols=121  Identities=30%  Similarity=0.350  Sum_probs=113.9

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v  115 (160)
                      |++|||+|++||||+|+.|.+++.++.||+.++++++|+|+|++|++||.+++||+.+.+. +.+++|.+++.+|+|.++
T Consensus         1 m~~V~Ivg~~rTpfgk~~g~~~~~~~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~   80 (387)
T PRK07850          1 MGNPVIVEAVRTPIGKRNGWLSGLHAAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHV   80 (387)
T ss_pred             CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCC
Confidence            4689999999999999989999999999999999999999999999999999999986543 478999999999999789


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++||++|+||++|+++|++.|++|..|++|++|+||||..
T Consensus        81 p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~  122 (387)
T PRK07850         81 GATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRV  122 (387)
T ss_pred             ceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCC
Confidence            999999999999999999999999999999999999999964

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=1.7e-29  Score=219.48  Aligned_cols=120  Identities=43%  Similarity=0.635  Sum_probs=114.7

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      ++|||+++.||||++++|.|+++++++|+.++++++|+|+||+|++||.+++||+.+.+.+++++|++++.+|+|.++|+
T Consensus         3 ~~~~iv~~~Rtp~~~~~g~l~~~~~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~   82 (392)
T PRK06633          3 KPVYITHAKRTAFGSFMGSLSTTPAPMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPG   82 (392)
T ss_pred             CCEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccc
Confidence            58999999999999999999999999999999999999999999999999999998766677899999999999877999


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++||++|+||++|+++|++.|++|.+|+++++|+||||..
T Consensus        83 ~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~  122 (392)
T PRK06633         83 YTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLG  122 (392)
T ss_pred             hhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCC
Confidence            9999999999999999999999999999999999999964

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.96  E-value=7.8e-29  Score=215.71  Aligned_cols=121  Identities=31%  Similarity=0.451  Sum_probs=114.5

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v  115 (160)
                      |++|||+|++|||||++.|.+++.+++||+.+|++++|+++|++|++||.+++||+.+.+ ++++++|++++.+|+|.++
T Consensus         1 ~~~v~Iv~~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~   80 (401)
T PRK08131          1 MLDAYIYDGLRSPFGRHAGALASVRPDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTV   80 (401)
T ss_pred             CCcEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCC
Confidence            568999999999999999999999999999999999999999999999999999998765 3578999999999999789


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++||++|+||++|++.|++.|++|.+|+++++|+||||..
T Consensus        81 p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~  122 (401)
T PRK08131         81 PGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRA  122 (401)
T ss_pred             ceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCC
Confidence            999999999999999999999999999999999999999964

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.96  E-value=8.2e-29  Score=215.58  Aligned_cols=121  Identities=32%  Similarity=0.513  Sum_probs=113.9

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~  114 (160)
                      |++|||+|++||||+++.|.+++.+++||+.+|++++|+| ++|+|++||.+++||+.+.++ +++++|.+++.+|+|.+
T Consensus         1 M~~V~Ivg~~rTpfgk~~g~l~~~~~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~   80 (401)
T PRK09050          1 MTEAFICDAIRTPIGRYGGALSSVRADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVS   80 (401)
T ss_pred             CCcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence            4689999999999999889999999999999999999996 799999999999999987665 47899999999999878


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++||++|+||++|++.|++.|++|.+|+++++|+||||..
T Consensus        81 vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~  123 (401)
T PRK09050         81 VPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRA  123 (401)
T ss_pred             CceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccC
Confidence            9999999999999999999999999999999999999999964

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.96  E-value=1.1e-28  Score=216.59  Aligned_cols=122  Identities=20%  Similarity=0.292  Sum_probs=115.7

Q ss_pred             cCCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          35 LSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        35 ~~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      +..++|||+|++||||++++|.+++.++.||+.++++++|+|++|+|++||.+++||+.+...+++++|.+++.+|||..
T Consensus         4 ~~~~~V~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~   83 (430)
T TIGR02446         4 RQGERIAIVAGLRTPFARQATAFHGIPAVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVH   83 (430)
T ss_pred             CcCCCEEEEecccCccccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCC
Confidence            45678999999999999999999999999999999999999999999999999999998755567899999999999988


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +|+++|+++|+||++|+++|++.|++|.++++|++|+||||.
T Consensus        84 ~p~~~V~~~CaSG~~A~~~a~~~I~sG~~dvvla~G~E~mS~  125 (430)
T TIGR02446        84 TDAYSVTRACATSFQSAVNVAESIMAGAIDIGIAGGADSSSV  125 (430)
T ss_pred             CchhhhhhhhhHHHHHHHHHHHHHHCCCCCEEEEeeeEcccC
Confidence            999999999999999999999999999999999999999985

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.96  E-value=2e-28  Score=213.31  Aligned_cols=121  Identities=27%  Similarity=0.388  Sum_probs=114.2

Q ss_pred             CCceEEEeeeeccccc--cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCC
Q psy4156          37 DNDVVIVSAARTPIGS--FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPN  113 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~--~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~  113 (160)
                      |++|||+++.|||||+  +.|.|+++++.||+.+|++++|+++||+|++||.+++||+.+.+. +++++|.+++.+|+|.
T Consensus         1 m~~v~Iv~~~RTp~g~~~~~g~l~~~~~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~   80 (402)
T PRK08242          1 MTEAYIYDAVRTPRGKGKKDGSLHEVKPVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPE   80 (402)
T ss_pred             CCcEEEEecccCCCccCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCC
Confidence            5689999999999998  589999999999999999999999999999999999999998654 5689999999999987


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++|+++||++|+||++|++.|+++|++|.++++|++|+|+||..
T Consensus        81 ~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~  124 (402)
T PRK08242         81 TVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRV  124 (402)
T ss_pred             CCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCC
Confidence            79999999999999999999999999999999999999999974

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.95  E-value=2.4e-28  Score=213.97  Aligned_cols=121  Identities=21%  Similarity=0.307  Sum_probs=114.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      .++|||+|++||||+++.|.+++.++.||+.+|++++|+|+||+|++||.+++||+.+..++++++|.+++.+|+|.++|
T Consensus         4 ~~~v~Ivg~~rTpfgk~~g~l~~~~~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P   83 (428)
T PRK08963          4 GDRIAIVSGLRTPFAKQATAFHGIPAVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTD   83 (428)
T ss_pred             CCeEEEEecccCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCc
Confidence            46899999999999998899999999999999999999999999999999999998876666789999999999987799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|+++|+||++|++.|++.|++|.+|++|++|+||||..
T Consensus        84 ~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~  124 (428)
T PRK08963         84 AYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVL  124 (428)
T ss_pred             ceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCC
Confidence            99999999999999999999999999999999999999953

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=4.5e-28  Score=210.79  Aligned_cols=125  Identities=26%  Similarity=0.393  Sum_probs=116.1

Q ss_pred             cccCCCceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCC-CCCChHHHHHHHc
Q psy4156          33 MVLSDNDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAG-QGQNPARQASIKA  109 (160)
Q Consensus        33 ~~~~m~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~  109 (160)
                      |.++|++|||+|++||||++ +.|.|++.++.||+.+|++++|+++ |++|++||.+++||+.++. ++++.+|.+.+.+
T Consensus         1 ~~~~m~~v~Ivg~~rTpfg~~~~g~~~~~s~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~   80 (399)
T PRK09052          1 MSKQLQDAYIVAATRTPVGKAPRGMFKNTRPDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLA   80 (399)
T ss_pred             CCCCCCcEEEEEeccCCcccCCCCCCCCCCHHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHc
Confidence            46789999999999999999 6899999999999999999999997 9999999999999998765 4567899888899


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |++.++|+++||++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus        81 Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~  128 (399)
T PRK09052         81 GLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMV  128 (399)
T ss_pred             CCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccC
Confidence            998669999999999999999999999999999999999999999864

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=5.7e-28  Score=209.63  Aligned_cols=121  Identities=31%  Similarity=0.505  Sum_probs=113.3

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~  114 (160)
                      |++|||+|++||||+++ .+.++++++.||+.+|++++|+|+|++|++||.+++|++.+++. +++++|.+++.+|+|.+
T Consensus         1 M~~v~Ivg~~rTpfgk~~~~~l~~~~~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~   80 (392)
T PRK07108          1 MTEAVIVSTARTPLAKSWRGAFNMTHGATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVT   80 (392)
T ss_pred             CCcEEEEecccCCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCC
Confidence            46899999999999984 78889999999999999999999999999999999999998764 45799999999999867


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++||++|+||++|+++|+++|++|.+++++++|+||||..
T Consensus        81 ~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~  123 (392)
T PRK07108         81 VPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCV  123 (392)
T ss_pred             CceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCC
Confidence            9999999999999999999999999999999999999999964

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.95  E-value=5.1e-28  Score=210.61  Aligned_cols=120  Identities=37%  Similarity=0.532  Sum_probs=112.7

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV  115 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v  115 (160)
                      ++|||+|++||||+++.|.+++++++||+.++++++|+| ++|+|++||.+++||+.+.++ +++++|.+++.+|+|.++
T Consensus         1 ~~v~Ivg~~rTpfgk~~g~~~~~~~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~   80 (400)
T TIGR02430         1 REAYICDAIRTPIGRYGGSLSSVRADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSV   80 (400)
T ss_pred             CcEEEEecccCCcccCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCC
Confidence            369999999999999889999999999999999999996 699999999999999987554 578999999999998779


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++||++|+||++|+..|++.|++|.+++++++|+||||..
T Consensus        81 p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~  122 (400)
T TIGR02430        81 PGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRA  122 (400)
T ss_pred             ceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCC
Confidence            999999999999999999999999999999999999999964

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=7.5e-28  Score=208.88  Aligned_cols=121  Identities=45%  Similarity=0.631  Sum_probs=114.0

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||++++|.++++++.||+.+|++++|+++|++|++||.+++|++.+.+++++++|.++..+|+|.++|
T Consensus         1 M~~v~Ivg~~rTpfg~~~g~~~~~~~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p   80 (393)
T PRK08235          1 MSKTVIVSAARTPFGKFGGSLKDVKATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQ   80 (393)
T ss_pred             CCcEEEEecCcCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcc
Confidence            46799999999999999899999999999999999999999999999999999999875566789999999999986899


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus        81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~  121 (393)
T PRK08235         81 TETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNA  121 (393)
T ss_pred             eeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccC
Confidence            99999999999999999999999999999999999999963

>KOG1390|consensus

Probab=99.95  E-value=4.7e-28  Score=203.74  Aligned_cols=123  Identities=48%  Similarity=0.684  Sum_probs=119.1

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      .+++|+|+++.|||+|.++|+|+.+++.+|+..|++++|+|+.++|+|++.+|+||+.+...|++++|++++-+|||.++
T Consensus         4 ~~k~V~IVsaARTPIGsF~gslssl~A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv   83 (396)
T KOG1390|consen    4 SSKDVFIVSAARTPIGSFRGSLSSLTATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSV   83 (396)
T ss_pred             CCCceEEEeeccccccccccccccCchhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcce
Confidence            35699999999999999999999999999999999999999999999999999999999888999999999999999999


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      |+++||..|+|||.|+.+|++.|++|..|++++||+|+||-..
T Consensus        84 ~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP  126 (396)
T KOG1390|consen   84 PATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVP  126 (396)
T ss_pred             eeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCc
Confidence            9999999999999999999999999999999999999999764

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=1.9e-27  Score=206.86  Aligned_cols=121  Identities=29%  Similarity=0.492  Sum_probs=114.6

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||+|+.|.+++.++.||+.+|++++|++++++|++||.+++|++.+...+++++|.+++.+|++..+|
T Consensus         1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p   80 (404)
T PRK06205          1 MRDAVICEPVRTPVGRFGGAFKDVPAEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVP   80 (404)
T ss_pred             CCceEEEEeecCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCc
Confidence            46899999999999999999999999999999999999999999999999999999887767788999999999986799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus        81 ~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~  121 (404)
T PRK06205         81 GMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNV  121 (404)
T ss_pred             eeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccC
Confidence            99999999999999999999999999999999999999953

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=2.8e-27  Score=205.08  Aligned_cols=121  Identities=46%  Similarity=0.709  Sum_probs=113.9

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||+|++|.++++++.||+.+|++++|+++|++|++||.+++|++.+.++++++++.++..+|++.++|
T Consensus         1 m~~v~Ivg~~rTpfgk~~g~~~~~~~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p   80 (393)
T PRK05656          1 MQDVVIVAATRTAIGSFQGSLANIPAVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVP   80 (393)
T ss_pred             CCcEEEEEcccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcc
Confidence            46899999999999999899999999999999999999999999999999999999876566788999999999985699


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus        81 ~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~  121 (393)
T PRK05656         81 AMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLA  121 (393)
T ss_pred             eEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccC
Confidence            99999999999999999999999999999999999999973

>PRK09051 beta-ketothiolase; Provisional

Probab=99.95  E-value=3.6e-27  Score=204.78  Aligned_cols=121  Identities=35%  Similarity=0.561  Sum_probs=113.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v  115 (160)
                      |++|||+|++||||++++|.+++.++.||+.+|++++|+++|++|++||.+++|++.+.+. .++.+|.+++.+|++.++
T Consensus         2 m~~v~Ivg~~rtp~g~~~g~~~~~~~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~   81 (394)
T PRK09051          2 MREVVVVSGVRTAIGTFGGSLKDVAPTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQET   81 (394)
T ss_pred             CCcEEEEecccCCccCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCC
Confidence            4689999999999999989999999999999999999999999999999999999987653 467899999999997579


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus        82 p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~  123 (394)
T PRK09051         82 PAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRA  123 (394)
T ss_pred             ceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccC
Confidence            999999999999999999999999999999999999999964

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.95  E-value=2.9e-27  Score=205.36  Aligned_cols=119  Identities=39%  Similarity=0.638  Sum_probs=112.7

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      ++|||+|++||||+++.|.+++.++.||+.+|++++|+|+||+|++||.+++||+.+.+++.+++|..++.+|+|.++|+
T Consensus         7 ~~V~Ivg~~rTpf~k~~g~~~~~~~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~   86 (397)
T PRK06954          7 DPIVIASAARTPMAAFQGEFASLTAPQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGC   86 (397)
T ss_pred             CCEEEEecccCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccE
Confidence            58999999999999988999999999999999999999999999999999999998766666788888899999977999


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++|+++|+||++|++.|+++|++|.+|+++++|+||||.
T Consensus        87 ~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~  125 (397)
T PRK06954         87 TTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTN  125 (397)
T ss_pred             eeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCC
Confidence            999999999999999999999999999999999999994

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=8.2e-27  Score=201.93  Aligned_cols=120  Identities=40%  Similarity=0.561  Sum_probs=112.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||+|+.|.+++.++.+|+.+|++++|+|+||+|++||.+++||+.+.+.+++++|.+++.+|+|.++|
T Consensus         1 M~~v~Ivg~~rTp~gr~~g~~~~~~~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p   80 (388)
T PRK06366          1 MKDVYIVSAKRTAIGKFGRSFSKIKAPQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVT   80 (388)
T ss_pred             CCcEEEEEcccCCcccCCCcccCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCc
Confidence            46799999999999999899999999999999999999999999999999999999765555678899999999986799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++++|+||++|+..|++.|++|..++++++|+||||.
T Consensus        81 ~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~  120 (388)
T PRK06366         81 KYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSN  120 (388)
T ss_pred             ceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEcccc
Confidence            9999999999999999999999999999999999999983

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=1.1e-26  Score=203.65  Aligned_cols=122  Identities=19%  Similarity=0.302  Sum_probs=114.4

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      +|++|||+|++||||+++.|.|++.++.||+.+|++++|++++++|++||.+++||+.+...+++++|.+++..|++..+
T Consensus         5 ~m~~V~Ivg~~rTpfg~~~g~l~~~~~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~   84 (427)
T PRK09268          5 TVRRVAILGGNRIPFARSNGAYADASNQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYT   84 (427)
T ss_pred             CCCCEEEEecCcCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCC
Confidence            57889999999999999889999999999999999999999999999999999999987544578999999999998679


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|+++|+||++|+..|+++|++|.+|+++++|+|+||..
T Consensus        85 p~~~V~~~CaSG~~ai~~A~~~I~sG~~d~vlvgG~E~ms~~  126 (427)
T PRK09268         85 PAYDLQQACGTGLEAAILVANKIALGQIDSGIAGGVDTTSDA  126 (427)
T ss_pred             ceeeeechhhHHHHHHHHHHHHHHCCCCCEEEEeeEEccCCC
Confidence            999999999999999999999999999999999999999954

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.94  E-value=8.2e-27  Score=202.36  Aligned_cols=121  Identities=35%  Similarity=0.511  Sum_probs=112.2

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~  114 (160)
                      |++|||+|++||||+++ .|.|++.++.||+.+|++++|+++|+.+++||.+++||+.++. ++++++|.+++.+|+|.+
T Consensus         1 M~~v~Ivg~~rTpfg~~~~g~l~~~~~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~   80 (391)
T PRK07661          1 MREAVIVAGARTPVGKAKKGSLKTVRPDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYT   80 (391)
T ss_pred             CCcEEEEEccCCCcccCCCCccCCCCHHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCC
Confidence            45799999999999985 7899999999999999999999999888999999999988765 357899999999999856


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+++|+||++|+..|+++|++|.+++++++|+||||..
T Consensus        81 ~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~  123 (391)
T PRK07661         81 VPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLV  123 (391)
T ss_pred             cceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC
Confidence            9999999999999999999999999999999999999999953

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.94  E-value=8.8e-27  Score=201.85  Aligned_cols=121  Identities=34%  Similarity=0.476  Sum_probs=112.6

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPN  113 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~  113 (160)
                      |++|||+|++||||+++ .|.+++.++++|+.++++++|++ +||+|++||.+++|++.+... +++++|.+++.+|+|.
T Consensus         1 M~~v~Ivg~~rTpfg~~~~g~~~~~~~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~   80 (387)
T PRK08947          1 MEDVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPH   80 (387)
T ss_pred             CCcEEEEEccCCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCC
Confidence            46899999999999985 89999999999999999999997 799999999999999876554 5789999999999997


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++|+++||++|+||++|+.+|+++|++|.+|+++++|+||||..
T Consensus        81 ~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~  124 (387)
T PRK08947         81 SVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHV  124 (387)
T ss_pred             CCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccC
Confidence            79999999999999999999999999999999999999999964

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.94  E-value=3.2e-26  Score=201.35  Aligned_cols=129  Identities=20%  Similarity=0.129  Sum_probs=116.3

Q ss_pred             cccccccCCCceEEEeeeeccc-cc----c-------CccCCCCCHHHHHHHHHHHHHHHcCCCccc--cCceEEEeeec
Q psy4156          29 TRSTMVLSDNDVVIVSAARTPI-GS----F-------LGSLSELKAHDLGSTAIKEVLKRANVLPNE--ISEVILGQALT   94 (160)
Q Consensus        29 ~~~~~~~~m~~V~Ivg~~rTpf-g~----~-------~g~~~~~~~~dL~~~A~~~aL~~agI~~~~--ID~vi~G~~~~   94 (160)
                      ..|+.+..|++|||+|++|||| ||    +       .|.+++.+++||+.+|++++|+++||+|++  ||.+++|++.+
T Consensus         3 ~~~~~~~~~~~v~Ivg~~rTpf~gk~~~~~~~~~~~~~G~~~~~s~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~   82 (438)
T PTZ00455          3 RSSLTTQAAKRVFVVGGHITPFVGKGSPLFIDKKHPDFGKKENKTLEELLATAIQGTLENTGLDGKAALVDKVVVGNFLG   82 (438)
T ss_pred             ccccchhhcCceEEEEeecccccCCCccccccccccccCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccc
Confidence            3466677788999999999999 87    2       577789999999999999999999999999  99999999976


Q ss_pred             CC--CCCChHHHHHHHcCCC------CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156          95 AG--QGQNPARQASIKANIP------NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus        95 ~~--~g~~~ar~~al~~GLp------~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ..  .+++++|.+++.+|+|      ..+|+++|+++|+||++|+..|++.|++|.+++++++|+||||..
T Consensus        83 ~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~  153 (438)
T PTZ00455         83 ELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTV  153 (438)
T ss_pred             cccccccchHHHHHHhccCcccccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccC
Confidence            54  3468999999888887      689999999999999999999999999999999999999999874

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.94  E-value=1.6e-26  Score=200.13  Aligned_cols=119  Identities=32%  Similarity=0.428  Sum_probs=110.7

Q ss_pred             ceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156          39 DVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV  115 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v  115 (160)
                      +|||+|++||||++ +.|.+++.++.||+.+|++++|++ ++++|++||.+++||+.+.. ++++++|.+.+.+|+|.++
T Consensus         1 ~v~Ivg~~rTpfg~~~~gs~~~~~~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~   80 (385)
T TIGR02445         1 DVVIVDFGRTPMGRSKGGAFRNTRAEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTS   80 (385)
T ss_pred             CEEEEecccCCcccCCCCCcCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCc
Confidence            48999999999998 488999999999999999999997 59999999999999997544 3567999999999999889


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++||++|+||++|++.|++.|++|..|++|++|+||||..
T Consensus        81 p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~  122 (385)
T TIGR02445        81 AAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHV  122 (385)
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccC
Confidence            999999999999999999999999999999999999999864

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=2.5e-25  Score=194.79  Aligned_cols=120  Identities=28%  Similarity=0.371  Sum_probs=111.8

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      +++|||+|++||||+++.|.+++.++.||+.+|++++|+++|++|++||.+++|+..+..+.+++++.++..+|++.++|
T Consensus         2 ~~~v~Ivg~~rTp~g~~~g~~~~~~~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p   81 (426)
T PRK08170          2 ARPVYIVDGARTPFLKARGGPGPFSASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVP   81 (426)
T ss_pred             CCcEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCce
Confidence            36899999999999998888888999999999999999999999999999999998865445678999999999976799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++++|+||++|++.|+++|++|.+++++++|+|+||.
T Consensus        82 ~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~  121 (426)
T PRK08170         82 AWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSH  121 (426)
T ss_pred             eeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccC
Confidence            9999999999999999999999999999999999999986

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.93  E-value=2.3e-25  Score=193.09  Aligned_cols=120  Identities=25%  Similarity=0.412  Sum_probs=111.1

Q ss_pred             CCceEEEeeeecccccc------CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHc
Q psy4156          37 DNDVVIVSAARTPIGSF------LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKA  109 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~------~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~  109 (160)
                      |++|||+|++||||+++      +|.|++.++.||+.+|++++|+|+|++|++||.+++|++.+++. +.+.+|...+..
T Consensus         1 m~~v~Ivg~~rTpfgk~~~~~~~~g~~~~~~~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a   80 (394)
T PRK06445          1 LEDVYLVDFARTAFSRFRPKDPQKDVFNNIRPEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLA   80 (394)
T ss_pred             CCcEEEEecccCCccccCcCCCCCCcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHc
Confidence            45799999999999987      58999999999999999999999999999999999999987653 456788888888


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++.++|+++|+++|+||++|++.|+++|++|.+++++++|+|+||.
T Consensus        81 ~~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~  127 (394)
T PRK06445         81 RLPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTR  127 (394)
T ss_pred             CCCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccc
Confidence            88878999999999999999999999999999999999999999984

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.92  E-value=7.8e-25  Score=193.31  Aligned_cols=121  Identities=29%  Similarity=0.426  Sum_probs=111.2

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~  114 (160)
                      .++|||+|++||||+++ ++.+++.++.||+.+|++++|+|+|++++|||.+++|++.+... .++.+|.+++.+|++..
T Consensus        45 ~~~V~IVG~grTpfgk~~~g~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~  124 (452)
T PLN02287         45 GDDVVIVAAYRTPICKAKRGGFKDTYPDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPET  124 (452)
T ss_pred             CCCEEEEEeecCCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCC
Confidence            35899999999999984 78888999999999999999999999999999999999976553 45678999999999866


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+++|+||++|++.|+++|++|.+++++++|+|+||..
T Consensus       125 ~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~  167 (452)
T PLN02287        125 VPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTN  167 (452)
T ss_pred             cceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCC
Confidence            9999999999999999999999999999999999999999864

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.92  E-value=7.4e-25  Score=190.08  Aligned_cols=118  Identities=44%  Similarity=0.641  Sum_probs=110.2

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +|||+|++||||+++.+.+++.++.||+.+|++++|+|+|+++++||.+++|++.+.+.+++.+|.+++.+|++.++|++
T Consensus         2 ~v~IvG~~~Tp~g~~~~~~~~~~~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~   81 (394)
T PLN02644          2 DVCIVGVARTPIGGFLGSLSSLSATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICT   81 (394)
T ss_pred             cEEEEeeccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceE
Confidence            69999999999999888889999999999999999999999999999999999876444567888899999998679999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +|+++|+||++|+..|++.|++|..++++++|+|+||.
T Consensus        82 ~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~  119 (394)
T PLN02644         82 TVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSN  119 (394)
T ss_pred             EEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCC
Confidence            99999999999999999999999999999999999984

>PRK05790 putative acyltransferase; Provisional

Probab=99.92  E-value=1.6e-24  Score=187.35  Aligned_cols=120  Identities=50%  Similarity=0.745  Sum_probs=111.7

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|+|+|++||||+|+.|.+++.++.||+.+|++++|+++|++|+|||.+++|++.+...++++++.+++..|++.++|
T Consensus         1 M~~v~IvG~~~tp~~r~~g~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~   80 (393)
T PRK05790          1 MKDVVIVSAARTPIGKFGGALKDVSAVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVP   80 (393)
T ss_pred             CCceEEEeeecCCccCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCc
Confidence            46899999999999998888999999999999999999999999999999999998876556678888888899986689


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++++|+||+.|+..|+++|++|..++++++|+|+||.
T Consensus        81 ~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~  120 (393)
T PRK05790         81 ALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQ  120 (393)
T ss_pred             eeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeecccc
Confidence            9999999999999999999999999999999999999975

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=2.6e-24  Score=187.46  Aligned_cols=120  Identities=27%  Similarity=0.405  Sum_probs=110.0

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAG-QGQNPARQASIKANIPN  113 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~  113 (160)
                      |++|+|+|++||||+++ +|.|++.++.||+.+|++++|+++ |++|++||.+++|++.+.. ++++.+|.++..+|++ 
T Consensus         1 m~~v~IvG~~~Tpfg~~~~g~~~~~~~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-   79 (406)
T PRK07851          1 MPEAVIVSTARSPIGRAFKGSLKDMRPDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-   79 (406)
T ss_pred             CCcEEEEecCCCCcccCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-
Confidence            35799999999999984 788999999999999999999997 9999999999999877543 3567889999999996 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++|+++|+++|+||+.|++.|++.|++|.+++++++|+|+||..
T Consensus        80 ~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~  123 (406)
T PRK07851         80 FLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRF  123 (406)
T ss_pred             CCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccC
Confidence            79999999999999999999999999999999999999999853

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.91  E-value=1.6e-24  Score=188.18  Aligned_cols=123  Identities=42%  Similarity=0.580  Sum_probs=114.7

Q ss_pred             CCceEEEeeeeccccccC-ccCCCCCHHHHHHHHHHHHHHHc--CCCccccCceEEEeeecCC-CCCChHHHHHHHcCCC
Q psy4156          37 DNDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKRA--NVLPNEISEVILGQALTAG-QGQNPARQASIKANIP  112 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~-g~~~~~~~~dL~~~A~~~aL~~a--gI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp  112 (160)
                      |++|+|+|++|||||++. +.++++.+++|...+.++.+++.  +|++.+||.+++||+.+.+ ++++++|.+++.+|+|
T Consensus         1 ~~~v~Ivg~~rt~~g~~~~~s~~~l~~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~   80 (392)
T COG0183           1 MRDVAIVGAGRTPFGKFGDGSLAELAAEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLP   80 (392)
T ss_pred             CceEEEEeeccCccccCCCCchhhcCHHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCC
Confidence            578999999999999996 99999999999999999999754  7999999999999999886 5779999999999999


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCCC
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADAH  159 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~~  159 (160)
                      .++|+++||++|+||++|++.|++.|++|.+|+++++|+||||...+
T Consensus        81 ~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~~  127 (392)
T COG0183          81 GSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAPM  127 (392)
T ss_pred             CCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCCc
Confidence            77999999999999999999999999999999999999999998653

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=1.8e-24  Score=186.29  Aligned_cols=114  Identities=26%  Similarity=0.385  Sum_probs=106.4

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +|||+|++|||||++.|.++++++++|+.+|++++++  |++ ++||.+++||+.+.  +++++|.+++.+|+|.++|++
T Consensus         2 ~v~Ivg~~rTpfg~~~g~~~~~~~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~--~~~~~r~~~~~~Gl~~~~p~~   76 (361)
T PRK06690          2 RAVIVEAKRTPIGKKNGMLKDYEVQQLAAPLLTFLSK--GME-REIDDVILGNVVGP--GGNVARLSALEAGLGLHIPGV   76 (361)
T ss_pred             cEEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC--cchHHHHHHHHcCCCCCCCce
Confidence            5999999999999999999999999999999999855  896 89999999999653  467899999999998889999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+||++|+..|++.|++|..++.+++|+|+||..
T Consensus        77 tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~  115 (361)
T PRK06690         77 TIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTS  115 (361)
T ss_pred             ehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCC
Confidence            999999999999999999999999999999999999964

>KOG1389|consensus

Probab=99.91  E-value=1.1e-24  Score=183.36  Aligned_cols=124  Identities=27%  Similarity=0.410  Sum_probs=117.1

Q ss_pred             ccCCCceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC
Q psy4156          34 VLSDNDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP  112 (160)
Q Consensus        34 ~~~m~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp  112 (160)
                      ..+.+||+|+++.|||++| .+|.|||..++||...+.++.+++.+++|++|+++++|++..++.+...+|..++++|+|
T Consensus        32 ~~~~~DVViVaa~RTaicka~rG~fkdt~pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~ga~e~R~a~~~ag~P  111 (435)
T KOG1389|consen   32 AASAEDVVIVAALRTAICKAKRGGFKDTRPDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSGASECRMAAFYAGFP  111 (435)
T ss_pred             cccccCEEEEeeccchhhhcccCCcccCChHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcchHHHHHHHHHcCCC
Confidence            3345799999999999996 589999999999999999999999999999999999999998887766889999999999


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|..+|||+|+||++|+...+..|++|+||+.+.+|+|+||..
T Consensus       112 ~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~  156 (435)
T KOG1389|consen  112 ETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTN  156 (435)
T ss_pred             cccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhccc
Confidence            999999999999999999999999999999999999999999976

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=4.9e-24  Score=183.99  Aligned_cols=120  Identities=29%  Similarity=0.484  Sum_probs=109.7

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v  115 (160)
                      |++|+|+|++||||+++.+.+++.++.+|+.+|++++|+|+|++|++||.+++|++.+.. +.++++|...+..|++..+
T Consensus         1 M~~v~Ivg~~~Tpf~~~~~~~~~~~~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~   80 (382)
T PRK07801          1 MAEAYIVDAVRTPVGKRKGGLAGVHPADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEV   80 (382)
T ss_pred             CCceEEEecccCCccCCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCC
Confidence            468999999999999988888899999999999999999999999999999999874433 3356889888889998779


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++++++|+||+.|++.|++.|++|..++++++|+|+||.
T Consensus        81 p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~  121 (382)
T PRK07801         81 PGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQ  121 (382)
T ss_pred             ceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcC
Confidence            99999999999999999999999999999999999999975

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.89  E-value=4.7e-23  Score=177.84  Aligned_cols=116  Identities=46%  Similarity=0.741  Sum_probs=108.1

Q ss_pred             EEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156          41 VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV  120 (160)
Q Consensus        41 ~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V  120 (160)
                      +|+|++||||+++.+.+++.++.||+.+|++++|+++|++++|||.+++|+..+...+++.++.++..+|++.++|+++|
T Consensus         1 ~Ivg~~~Tpf~r~~~~~~~~~~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v   80 (386)
T cd00751           1 VIVSAVRTPIGRFGGALKDVSADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTV   80 (386)
T ss_pred             CEEEeecCCccCCCCCCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhh
Confidence            59999999999998888899999999999999999999999999999999887766667788889999999745899999


Q ss_pred             cccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         121 NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       121 ~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++|+||++|+..|+++|++|.+++++++|+|+||.
T Consensus        81 ~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~  116 (386)
T cd00751          81 NRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSR  116 (386)
T ss_pred             ccccHHHHHHHHHHHHHHHCCCCCeEEEeeeecccc
Confidence            999999999999999999999999999999999975

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>KOG1391|consensus

Probab=99.89  E-value=3.1e-23  Score=171.56  Aligned_cols=121  Identities=34%  Similarity=0.528  Sum_probs=116.0

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~v  115 (160)
                      .+-|+|++++||+||.++|.+|+++..||...|++++|..+++.++.+|.||+||+.... ++.|++|++-+..|.|+++
T Consensus         3 ~kgvfiVaAKRTaFGtfGG~LKg~~aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgIYl~RHvGL~~GvP~e~   82 (396)
T KOG1391|consen    3 GKGVFIVAAKRTAFGTFGGKLKGLSATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGIYLARHVGLRVGVPKET   82 (396)
T ss_pred             cceEEEEEecccccccccccccCcchhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCceEeeeccccccCCcCcc
Confidence            467999999999999999999999999999999999999999999999999999998765 5789999999999999999


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|||.|+||.|++..+++.|.-|..++++.||.|+||-.
T Consensus        83 pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~  124 (396)
T KOG1391|consen   83 PALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQA  124 (396)
T ss_pred             CceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccC
Confidence            999999999999999999999999999999999999999964

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.88  E-value=3.3e-22  Score=172.92  Aligned_cols=116  Identities=43%  Similarity=0.609  Sum_probs=107.2

Q ss_pred             EEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156          42 IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN  121 (160)
Q Consensus        42 Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~  121 (160)
                      |+|++||||+|+.|.+++.++.+|+.+|++++|+++|++++|||.+++|+..+....++.++.++..+|++.++|+++++
T Consensus         1 IvG~~~tp~~~~~g~~~~~t~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~   80 (386)
T TIGR01930         1 IVAAARTPIGKFGGSLKDVSAEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN   80 (386)
T ss_pred             CcceecCCccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec
Confidence            68999999999888899999999999999999999999999999999998876654567788899999997569999999


Q ss_pred             ccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++|+||+.|+..|+++|++|.+++++++|+|+||..
T Consensus        81 ~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~  116 (386)
T TIGR01930        81 RQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRV  116 (386)
T ss_pred             chhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccC
Confidence            999999999999999999999999999999999864

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=8e-22  Score=173.08  Aligned_cols=117  Identities=11%  Similarity=-0.028  Sum_probs=103.8

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHH-HHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQA-SIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~-al~~GLp~~v  115 (160)
                      |++|+|+|++||||+++   +++.+..||+.+|++++|+++|+++++||.+++++..+...++++++.. +..+|++ .+
T Consensus        15 m~~VaIvG~g~Tpfgr~---~~~~~~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~   90 (430)
T PRK06365         15 SRDVYMVAAGVTKFDKA---SPYMDFRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PK   90 (430)
T ss_pred             ccCEEEEEeeecCcccc---CCCCCHHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CC
Confidence            67899999999999984   2467789999999999999999999999999988766544555667664 6889997 59


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|+++|+||..|+..|++.|++|.+++++++|+||||..
T Consensus        91 ~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~  132 (430)
T PRK06365         91 PSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHV  132 (430)
T ss_pred             ceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccc
Confidence            999999999999999999999999999999999999999863

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.87  E-value=5.7e-22  Score=172.07  Aligned_cols=114  Identities=34%  Similarity=0.463  Sum_probs=102.8

Q ss_pred             EeeeeccccccC---ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH-cCCCCCCceE
Q psy4156          43 VSAARTPIGSFL---GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK-ANIPNEVPAS  118 (160)
Q Consensus        43 vg~~rTpfg~~~---g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~-~GLp~~vPa~  118 (160)
                      +|++||||+++.   |.++...+.||+.+|++++|++++|+|++||.+++|+..+...++++++..... .|+ .++|++
T Consensus         1 ~g~~~Tpfg~~~~~~g~~~~~~~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~-~~~p~~   79 (393)
T cd00826           1 AGAAMTAFGKFGGENGADANDLAHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGL-QEAPAI   79 (393)
T ss_pred             CccccCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCC-CCCcEE
Confidence            478999999987   888899999999999999999999999999999999998876667788864444 555 589999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+||++|+..|+++|++|.+++++++|+|+||..
T Consensus        80 ~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~  118 (393)
T cd00826          80 GMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETS  118 (393)
T ss_pred             EecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccC
Confidence            999999999999999999999999999999999999853

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=2.7e-21  Score=166.86  Aligned_cols=114  Identities=18%  Similarity=0.219  Sum_probs=104.7

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      ++|+|+|.+.|||+++    ++.++.+|+.+|++++|+++||+|++||.+++|+..+.++..++++.++..+|++ ..|.
T Consensus         1 ~~v~IvG~g~t~~~~~----~~~~~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~   75 (385)
T PRK12578          1 RRVAVIGVGNSKFGRR----DDVSVQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVP   75 (385)
T ss_pred             CceEEEeecccceeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCe
Confidence            4799999999999997    5789999999999999999999999999999999876544456789999999997 5788


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++|+++|+||+.|+..|+++|++|..++++++|.|+||.
T Consensus        76 ~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~  114 (385)
T PRK12578         76 LRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTE  114 (385)
T ss_pred             eEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence            999999999999999999999999999999999999985

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.86  E-value=3.2e-21  Score=167.58  Aligned_cols=114  Identities=18%  Similarity=0.193  Sum_probs=100.2

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      ++|+|+|++||||+++    ++.++.+|+.++++++|+++||+|+|||.+++|++.+.......+..++..+|++ ++|+
T Consensus         7 ~~v~IvG~g~tp~~~~----~~~~~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~   81 (398)
T PRK06157          7 DKVAILGMGCTKFGER----WDAGAEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPV   81 (398)
T ss_pred             CCeEEEEecccccccc----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCE
Confidence            5799999999999986    5788999999999999999999999999999998764321112234566788997 6999


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++|+++|+||+.|+++|++.|++|..++++++|+||||.
T Consensus        82 ~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~  120 (398)
T PRK06157         82 TRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKD  120 (398)
T ss_pred             EEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccc
Confidence            999999999999999999999999999999999999986

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=3.8e-21  Score=166.27  Aligned_cols=116  Identities=17%  Similarity=0.130  Sum_probs=99.6

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC--CChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG--QNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g--~~~ar~~al~~GLp~~  114 (160)
                      |++|+|+|++||||+|+    ++.++.+|+.+|++++|+++|+++++||.+++|+..+....  ...+..+....|+. .
T Consensus         1 ~~~v~Ivg~g~tpfgr~----~~~~~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~   75 (389)
T PRK07516          1 MMTASIVGWAHTPFGKL----DAETLESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-F   75 (389)
T ss_pred             CCcEEEEeCCcceeeec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-C
Confidence            56899999999999986    57899999999999999999999999999999988654321  11222334456775 7


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+++|+||+.|++.|+++|++|.+++++++|.|+||..
T Consensus        76 ~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~  118 (389)
T PRK07516         76 KPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTAT  118 (389)
T ss_pred             CceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccC
Confidence            9999999999999999999999999999999999999999853

>PRK06059 lipid-transfer protein; Provisional

Probab=99.85  E-value=1.1e-20  Score=163.74  Aligned_cols=113  Identities=16%  Similarity=0.123  Sum_probs=102.0

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCCc
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEVP  116 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~vP  116 (160)
                      ++|+|+|++||||+|+     +.+..+|+.+|++++|+++|+++++||.+++++..+... .+..++.++..+|++ ++|
T Consensus         4 ~~v~Ivg~~~t~~~r~-----~~~~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~   77 (399)
T PRK06059          4 EPVYILGAGMHPWGKW-----GRDFVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAP   77 (399)
T ss_pred             CcEEEEEecccccCCC-----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCc
Confidence            5799999999999984     457799999999999999999999999999998876543 334578899999996 799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++++|+||+.|+..|+++|++|..++++++|.|+||.
T Consensus        78 ~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~  117 (399)
T PRK06059         78 VSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPK  117 (399)
T ss_pred             eecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCC
Confidence            9999999999999999999999999999999999999985

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=1.3e-20  Score=162.60  Aligned_cols=116  Identities=19%  Similarity=0.180  Sum_probs=105.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC--CCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ--GQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~--g~~~ar~~al~~GLp~~  114 (160)
                      |++|+|+|++||||+++    ++.++.+|+.+|++++|+++|+++++||.+++|+..+...  .+++++.++..+|++ .
T Consensus         1 m~~v~IvG~~~tp~~~~----~~~~~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~   75 (389)
T PRK06064          1 MRDVAIIGVGQTKFGEL----WDVSLRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-P   75 (389)
T ss_pred             CCcEEEEEcccccceec----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-C
Confidence            46899999999999986    5789999999999999999999999999999998765442  356888999999997 7


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      .|.++++++|+||+.|+..|+++|++|.+++++++|.|+||..
T Consensus        76 ~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~  118 (389)
T PRK06064         76 IPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDV  118 (389)
T ss_pred             CCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccC
Confidence            9999999999999999999999999999999999999999853

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.83  E-value=3.8e-20  Score=160.78  Aligned_cols=118  Identities=16%  Similarity=0.092  Sum_probs=98.0

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-C-CChH-HHHHHHcCCCCC
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-G-QNPA-RQASIKANIPNE  114 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g-~~~a-r~~al~~GLp~~  114 (160)
                      ++|+|+|++||||+|+ +..++.++.||+.+|++++|+++|++|++||.+++|+..++.. . ...+ .......++. +
T Consensus         3 ~~v~Ivg~~~t~~~r~-~~~~~~s~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~~~~~-g   80 (403)
T PRK06289          3 DDVWVLGGYQSDFARN-WTKEGRDFADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVHPALW-G   80 (403)
T ss_pred             CcEEEEeCCcCccccc-cCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHhhcCC-C
Confidence            4799999999999974 5667899999999999999999999999999999998765421 1 1111 1122334663 6


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++++++|+||++|++.|+.+|++|.+++++++|+|+||..
T Consensus        81 ~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~  123 (403)
T PRK06289         81 VPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTV  123 (403)
T ss_pred             CceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCC
Confidence            8999999999999999999999999999999999999999853

>KOG1392|consensus

Probab=99.80  E-value=2.6e-20  Score=156.28  Aligned_cols=133  Identities=23%  Similarity=0.271  Sum_probs=122.2

Q ss_pred             hccccccccccc-CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChH
Q psy4156          24 FVTGFTRSTMVL-SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPA  102 (160)
Q Consensus        24 ~~~~~~~~~~~~-~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~a  102 (160)
                      |+|--.++..++ +|++++++++.||||--.+..++++-|.||+.++...+|++..++.|.+|.+|+|++.+.....|++
T Consensus        27 ~~ta~a~~~~k~kn~~nivlvdgvrtpfl~sgt~ykdlmphdlar~al~~ll~kt~lpke~~dyii~gtviqevktsnia  106 (465)
T KOG1392|consen   27 FGTARAASAVKKKNMPNIVLVDGVRTPFLVSGTVYKDLMPHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIA  106 (465)
T ss_pred             hhhhhccccccccCCCceEEEecccCceeecccchhhhchhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHH
Confidence            455555555544 6889999999999998888889999999999999999999999999999999999999876678999


Q ss_pred             HHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         103 RQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       103 r~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |++++.+|+++.+|+.+|..+|.|+.+|+..+...|++|.+|++++||+|-||-
T Consensus       107 reaal~agfsdktpahtvtmacissn~amttgmgliatg~~dvivaggvelmsd  160 (465)
T KOG1392|consen  107 REAALLAGFSDKTPAHTVTMACISSNVAMTTGMGLIATGNADVIVAGGVELMSD  160 (465)
T ss_pred             HHHHHhcCCCCCCccceeeeehhccchhhhccceeEeeCCcCEEEEcceeeccc
Confidence            999999999999999999999999999999999999999999999999999984

>PRK08256 lipid-transfer protein; Provisional

Probab=99.79  E-value=9.8e-19  Score=151.32  Aligned_cols=112  Identities=14%  Similarity=0.177  Sum_probs=97.9

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +|+|+|++||||+++ +  ++.++.+|+.+|++++|+++|+++++||.+++|+..+...   ........+|+. ++|++
T Consensus         2 ~v~IvG~~~t~~~~~-~--~~~~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~---~~~~~~~~lGl~-~~~~~   74 (391)
T PRK08256          2 KVFVAGVGMTPFEKP-G--ASWDYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDST---SGQRALYEVGMT-GIPIV   74 (391)
T ss_pred             cEEEEeccccccccC-C--CCCCHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcc---hhHHHHHHcCCC-CCCCc
Confidence            599999999999964 2  4678999999999999999999999999999998876431   122455678995 78999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++++|+||++|+..|+++|++|..++++++|+|+||..
T Consensus        75 ~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~  113 (391)
T PRK08256         75 NVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPG  113 (391)
T ss_pred             ccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccc
Confidence            999999999999999999999999999999999999853

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.78  E-value=1.2e-18  Score=148.94  Aligned_cols=110  Identities=18%  Similarity=0.162  Sum_probs=100.9

Q ss_pred             EeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          43 VSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        43 vg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      +|.+.|||+++.    +.++.||+.+|++++|+++|++|++||.+++|+..+....+++++.++..+|++ .+|++++++
T Consensus         1 vG~g~t~~~~~~----~~~~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~~   75 (375)
T cd00829           1 VGVGMTPFGRRS----DRSPLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVEA   75 (375)
T ss_pred             CeeeecCcccCC----CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEeC
Confidence            477899999873    789999999999999999999999999999999876544467899999999997 899999999


Q ss_pred             cCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         123 LCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       123 aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+|++.++..|++.|++|..++++++|.|+|+..
T Consensus        76 ~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~  110 (375)
T cd00829          76 AGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDV  110 (375)
T ss_pred             ccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccC
Confidence            99999999999999999999999999999999864

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.77  E-value=3.9e-18  Score=147.74  Aligned_cols=114  Identities=13%  Similarity=0.072  Sum_probs=99.8

Q ss_pred             CCceEEEeeeeccc-cccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CC-CChHHHHHHHcCCCC
Q psy4156          37 DNDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QG-QNPARQASIKANIPN  113 (160)
Q Consensus        37 m~~V~Ivg~~rTpf-g~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g-~~~ar~~al~~GLp~  113 (160)
                      |++|+|+|++.||| +++    .+.++.||+.+|++++|+++||+++|||.+++++ .++. .+ .+++..++..+|+. 
T Consensus         2 ~~~v~IvG~g~t~~~~~~----~~~s~~eL~~eAa~~Al~dAgl~~~dID~iv~~~-~~~~~~~~~~~~~~va~~LGl~-   75 (386)
T PRK08313          2 KRLAAVLGTGQTKYVAKR----QDVSMAGLVREAIDRALADAGLTWDDIDAVVVGK-APDFFEGVMMPELFLADALGAT-   75 (386)
T ss_pred             CCcEEEEEeecCCcCccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEec-cccccccccCchHHHHHhcCCC-
Confidence            46899999999999 665    4778999999999999999999999999999987 3332 12 24556788889996 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ..|+++++.+|+||..+++.|+++|++|.++.+++.|.|+|+.
T Consensus        76 ~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~  118 (386)
T PRK08313         76 GKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSE  118 (386)
T ss_pred             CCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccC
Confidence            7899999999999999999999999999999999999999975

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.77  E-value=2.4e-18  Score=146.46  Aligned_cols=118  Identities=15%  Similarity=0.099  Sum_probs=109.7

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      .++.||.  .||++.+|+.+..++...+|+.+|++++|+++|++|+|||.+|+++.+|+...|..|..++..+|+. .++
T Consensus        29 tsdewI~--~rtGir~R~~a~~~e~~s~la~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~  105 (323)
T COG0332          29 TSDEWIE--TRTGIRERRIAADDETTSDLAVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAP  105 (323)
T ss_pred             CCcceee--eecCCceeeecCCCccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccc
Confidence            4689999  5999998888878999999999999999999999999999999999999877788999999999997 699


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++.+|+++++|+..|..+|++|.++-++|.|.|++|+-
T Consensus       106 afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~  146 (323)
T COG0332         106 AFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI  146 (323)
T ss_pred             eeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc
Confidence            99999999999999999999999998888888899998763

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.76  E-value=8.4e-18  Score=146.23  Aligned_cols=113  Identities=15%  Similarity=0.058  Sum_probs=99.9

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-C-CCChHHHHHHHcCCCCCC
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-Q-GQNPARQASIKANIPNEV  115 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~-g~~~ar~~al~~GLp~~v  115 (160)
                      ++|+|+|.+.|||+++    .+.+..+|+.+|++++|+++|++++|||.+++++. ++. . .+..+..++..+|+. ..
T Consensus         9 ~~vaIvG~g~t~~~~~----~~~~~~~L~~~A~~~Al~dagl~~~dID~~i~~~~-~~~~~~~~~~a~~l~~~lG~~-~~   82 (392)
T PRK06065          9 KRVAVIGAGLTLFRRR----LLETPQELAWEAASKALDEAGLELKDIDCVVIGSA-PDAFDGVHMKGEYLSHGSGGI-RK   82 (392)
T ss_pred             CceEEEEecccCCcCC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecc-CCcccccccHHHHHHHHcCCC-CC
Confidence            4799999999999987    46789999999999999999999999999999863 322 2 234777788889985 69


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|+.+|+||..++..|+++|++|..+++++.|.|||+.
T Consensus        83 ~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~  123 (392)
T PRK06065         83 PVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSP  123 (392)
T ss_pred             CeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccc
Confidence            99999999999999999999999999999999999999863

>PRK06158 thiolase; Provisional

Probab=99.73  E-value=2.2e-17  Score=142.86  Aligned_cols=110  Identities=14%  Similarity=-0.045  Sum_probs=95.5

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      ++|+|+|.+.|||+++    .+.++.||+.+|++++|+++||+++|||.+++++...    ...+..++..+|++ ..|.
T Consensus         8 ~~vaIvG~g~t~~~~~----~~~t~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~~~----~~~~~~la~~lGl~-~~~~   78 (384)
T PRK06158          8 GRTAIVGAATAGLGEA----PGLSAMELLAQAAHRALADAGLTMADVDGLFTASPDD----ALWGLSVAEYLGIR-PRFV   78 (384)
T ss_pred             CCEEEEEeeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCC----CCcHHHHHHHcCCC-Ceee
Confidence            5799999999999886    4788999999999999999999999999999987432    12334577788996 6899


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEE-Eeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGN-GAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vliv-gG~E~mt~  156 (160)
                      ++++.+|+|+..+++.|+++|++|.+++++| +|.|+|+.
T Consensus        79 ~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~  118 (384)
T PRK06158         79 DGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSA  118 (384)
T ss_pred             ccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccC
Confidence            9999999999999999999999998888886 59998874

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=99.73  E-value=3.3e-17  Score=138.01  Aligned_cols=115  Identities=17%  Similarity=0.062  Sum_probs=101.5

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.+|.  .||++.+++...+++++.||+.+|++++|+++|++|++||.+++|+..+.... ..+..++..+|+. ++|++
T Consensus        30 ~~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~~-~~~~~v~~~Lg~~-~~~~~  105 (326)
T CHL00203         30 DHWIS--TRTGIKKRHLAPSSTSLTKLAAEAANKALDKAHMDPLEIDLIILATSTPDDLF-GSASQLQAEIGAT-RAVAF  105 (326)
T ss_pred             hhhEe--eccCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCC-chHHHHHHHhCCC-CCcee
Confidence            45676  79999998888899999999999999999999999999999999987765322 2345677778996 79999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++++|+||++|++.|+++|++|.++.+++.|.|+||..
T Consensus       106 ~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~  144 (326)
T CHL00203        106 DITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKW  144 (326)
T ss_pred             eecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCc
Confidence            999999999999999999999999999999999999864

>KOG1406|consensus

Probab=99.70  E-value=4.4e-17  Score=135.55  Aligned_cols=120  Identities=15%  Similarity=0.192  Sum_probs=103.9

Q ss_pred             ccCCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC
Q psy4156          34 VLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN  113 (160)
Q Consensus        34 ~~~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~  113 (160)
                      +++..+|||+|.++|+|.+. |...+.+.+|++.+|+..+|++++++.++||...+|.++++.   ..++.+--..|+. 
T Consensus         2 s~t~~rvyvvgvgmtkf~kp-g~~~~~dypd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-   76 (408)
T KOG1406|consen    2 TKTKPRVYVVGVGMTKFEKP-GRVADWDYPDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-   76 (408)
T ss_pred             CCCCceEEEEecceeeecCC-CcccCCCCchHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-
Confidence            33445799999999999875 556788999999999999999999999999999999998754   2222333357996 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      ++|.++||++|++|.+|+.+|-+.|++|..|+++.-|+|||.++.
T Consensus        77 gipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gs  121 (408)
T KOG1406|consen   77 GIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGS  121 (408)
T ss_pred             CcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcc
Confidence            999999999999999999999999999999999999999998863

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.70  E-value=1.2e-16  Score=133.40  Aligned_cols=114  Identities=15%  Similarity=0.075  Sum_probs=102.3

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .||+|.+++.++++.++.+|+.+|++++|+++|+++++||.+++|+..++...+..+..++..+|++ .+|+++
T Consensus        32 ~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~  108 (319)
T PRK09352         32 EWIV--TRTGIKERRIAAPDETTSDLATEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFD  108 (319)
T ss_pred             HHhh--hhcCeEEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEee
Confidence            4455  4899988888888999999999999999999999999999999998876544556777888999995 799999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++++|+||+.|+..|++.|++|..+.++++|.|+|+.
T Consensus       109 v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~  145 (319)
T PRK09352        109 LSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSR  145 (319)
T ss_pred             ccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence            9999999999999999999999999999999999875

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=99.67  E-value=3.9e-16  Score=130.38  Aligned_cols=113  Identities=14%  Similarity=0.101  Sum_probs=101.3

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .|+++.+++....++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ .+|+++
T Consensus        31 ~~i~--~~~gi~~r~~~~~~~~~~~la~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~  107 (318)
T TIGR00747        31 EWIV--TRTGIKERRIAADDETSSTMGFEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFD  107 (318)
T ss_pred             HHee--cccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEee
Confidence            4455  3788888777888999999999999999999999999999999998877654566778899999997 699999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      ++++|+|+..|++.|+.+|++|..+.+++.+.|+++
T Consensus       108 v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~  143 (318)
T TIGR00747       108 LSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLS  143 (318)
T ss_pred             hhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhc
Confidence            999999999999999999999999999999999987

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.67  E-value=4.3e-16  Score=131.27  Aligned_cols=110  Identities=14%  Similarity=-0.008  Sum_probs=97.3

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      +|++.+++-...+.++.+|+.+|++++|+++|+++++||.+++++..++...+..+..++..+|++..+|+++|+++|+|
T Consensus        46 ~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~~~C~~  125 (338)
T PRK09258         46 LTGIRERRWWPEGTQLSDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVSNACLG  125 (338)
T ss_pred             hcCceeEecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehhhhhHH
Confidence            45665554444688999999999999999999999999999999987766567788999999999867999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++|++.|.++|++|.++.+++.+.|+++.
T Consensus       126 ~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~  155 (338)
T PRK09258        126 FLNGMLDAANMIELGQIDYALVVSGESARE  155 (338)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEEecccch
Confidence            999999999999999999999999998765

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.66  E-value=1.2e-15  Score=132.71  Aligned_cols=113  Identities=17%  Similarity=0.085  Sum_probs=92.0

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCc-cccCceEEEeeecCCCCCC-hHHHHHHHcCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRAN-VLP-NEISEVILGQALTAGQGQN-PARQASIKANIP  112 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~ag-I~~-~~ID~vi~G~~~~~~~g~~-~ar~~al~~GLp  112 (160)
                      .|++|+|+|.+.|||++++   .+.+..||+.+|++++|+++| |++ +|||.+++++. ....+.. ....++..+|+.
T Consensus         2 ~~~~vaIvG~g~t~~~~~~---~~~s~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~-~~~~~~~~~~~~~~~~lg~~   77 (385)
T PRK06066          2 FLNRVAIVGIGWYGFRPTT---PEVSFREMMFEAASRAYKDAGNINPRRDVDSFISCQE-DFWEGIAIADEFAPDQIGGA   77 (385)
T ss_pred             CCCcEEEEEeeecCCcCCC---CCCCHHHHHHHHHHHHHHhcCCCCChhcCCEEEEecC-cccCcccccchhHHHHcccC
Confidence            4789999999999999642   367899999999999999999 997 79999988642 1111111 223455677884


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                       ..|.+++   |+||..+++.|+..|++|.+|++++.|.|||+.
T Consensus        78 -~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~  117 (385)
T PRK06066         78 -MRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSD  117 (385)
T ss_pred             -CCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccC
Confidence             5788887   999999999999999999999999999999975

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.64  E-value=1.3e-15  Score=132.50  Aligned_cols=110  Identities=11%  Similarity=-0.038  Sum_probs=93.7

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      .+|+|+|.+.|||+++    .+.++.||+.+|++++|+++||+++|||.++.++   ..... ....++..+|++ ..|.
T Consensus         5 ~~vaIvG~g~t~~~~~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~---~~~~~-~~~~~~~~lGl~-~~~~   75 (388)
T PRK08142          5 GKAYIVGAYEHPTRKA----PDKSVAQLHAEVAKGALADAGLSLADVDGYFCAG---DAPGL-GPASMVDYLGLK-LRHV   75 (388)
T ss_pred             CCEEEEEEeeccceeC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEcC---CCCCc-cHHHHHHhCCCC-Ceee
Confidence            4799999999999987    4678899999999999999999999999976421   11111 123477788995 7899


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .+++.+|+|+..++..|+..|++|.++++++.|.|||+.
T Consensus        76 ~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~  114 (388)
T PRK08142         76 DSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRS  114 (388)
T ss_pred             ccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeeccc
Confidence            999999999999999999999999999999999999863

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=99.64  E-value=1.7e-15  Score=130.68  Aligned_cols=114  Identities=17%  Similarity=0.035  Sum_probs=100.6

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.+|.  .+|++.+++...+++++.+|+.+|++++|++++++|+|||.+++++..+.... ..+..++..+|++ +.|++
T Consensus        75 ~~~i~--~~tGi~~R~~~~~~~~~~~La~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~-~~a~~v~~~LG~~-~~~~~  150 (379)
T PLN02326         75 DEWIA--TRTGIRNRRVLSGDETLTSLAVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLF-GSAPQVQAALGCT-NALAF  150 (379)
T ss_pred             hhhee--cccCcceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccC-cHHHHHHHHhCCC-CCcee
Confidence            45564  68999988888889999999999999999999999999999999987654322 3566788889997 89999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++.+|+|++.|++.|+++|++|.++.++++|.|.||.
T Consensus       151 dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~  188 (379)
T PLN02326        151 DLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSR  188 (379)
T ss_pred             eccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcC
Confidence            99999999999999999999999999999999999875

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=99.64  E-value=1.8e-15  Score=125.94  Aligned_cols=109  Identities=16%  Similarity=0.119  Sum_probs=95.4

Q ss_pred             ccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccH
Q psy4156          48 TPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSG  127 (160)
Q Consensus        48 Tpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSG  127 (160)
                      +.+.+++-..++.++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++ .+|+++++++|+|+
T Consensus        34 ~gi~~r~~~~~~~~~~~l~~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~~~C~s~  112 (324)
T cd00827          34 TGIGQRHMAGDDEDVPTMAVEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLKQACYGG  112 (324)
T ss_pred             eecceeEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehhhhhHHH
Confidence            33333333335789999999999999999999999999999999877655667888999999998 89999999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         128 LKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       128 l~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +.|+..|+++|++|..+.+++.+.|+|+..
T Consensus       113 ~~al~~A~~~i~~g~~~~vlvv~~e~~~~~  142 (324)
T cd00827         113 TAALQLAANLVESGPWRYALVVASDIASYL  142 (324)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEEEEHHhhhc
Confidence            999999999999999999999999999854

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.63  E-value=2.2e-15  Score=126.08  Aligned_cols=109  Identities=18%  Similarity=0.090  Sum_probs=96.8

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      ++.+.+++-..+++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ ..++++++++|+|
T Consensus        38 ~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~~~C~~  116 (325)
T PRK12879         38 RTGIKERRIAHVEEYTSDLAIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDINAACAG  116 (325)
T ss_pred             ccCceEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEECccchH
Confidence            566666666667889999999999999999999999999999998876655677888899999997 6899999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +..|+..|.++|++|..+.+++.+.|+|+.
T Consensus       117 ~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~  146 (325)
T PRK12879        117 FLYGLETANGLITSGLYKKVLVIGAERLSK  146 (325)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEEehhhcC
Confidence            999999999999999999999999999875

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=99.63  E-value=2.5e-15  Score=124.98  Aligned_cols=110  Identities=15%  Similarity=0.026  Sum_probs=98.4

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .++.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|++ ..|+++++++|+
T Consensus        34 ~~~Gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~~~C~  112 (320)
T cd00830          34 TRTGIRERRIADPGETTSDLAVEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDINAACS  112 (320)
T ss_pred             hccCceEEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeeccccch
Confidence            3566666666667899999999999999999999999999999998876654567888899999997 799999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+..|+..|+++|++|..+.+++.+.|+|+.
T Consensus       113 s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~  143 (320)
T cd00830         113 GFLYGLSTAAGLIRSGGAKNVLVVGAETLSR  143 (320)
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEEEehhhcc
Confidence            9999999999999999999999999999875

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.63  E-value=1.5e-15  Score=130.90  Aligned_cols=109  Identities=12%  Similarity=0.065  Sum_probs=90.9

Q ss_pred             eccccccCccCC-----CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156          47 RTPIGSFLGSLS-----ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN  121 (160)
Q Consensus        47 rTpfg~~~g~~~-----~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~  121 (160)
                      +|.+.+|+...+     +.++.||+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++ .+|+++++
T Consensus        43 ~~Gi~~R~~~~~~~~~~~~~~~~La~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~  121 (378)
T PRK06816         43 NNGIKTRHYALDPEGRPTHSNAQMAAEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA  121 (378)
T ss_pred             hCCCceEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec
Confidence            566655543332     257899999999999999999999999999999876543343445667778987 68999999


Q ss_pred             ccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++|+|+++|++.|+++|++|.++.+++.|.|+||+
T Consensus       122 ~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~  156 (378)
T PRK06816        122 GVCAAGMMALKYAYLSVKAGESRNAVATASELASR  156 (378)
T ss_pred             CcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchh
Confidence            99999999999999999999999999999999975

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=99.62  E-value=2.8e-15  Score=127.93  Aligned_cols=116  Identities=14%  Similarity=0.115  Sum_probs=100.8

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      -+|.  .+|.+.+++..-+++++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++...|+++
T Consensus        30 ~~i~--~~~Gi~~r~v~~~~~~~~~la~~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~d  107 (345)
T TIGR00748        30 ESIS--NGLPVEEKAVPGLDEDTATIGVEAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAAD  107 (345)
T ss_pred             hHee--eccceeeeecCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEE
Confidence            4454  47777777766678999999999999999999999999999999887766555666778888999965789999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++.+|+|+..|+..|+.+|++|..+.+++.+.|+|+.+
T Consensus       108 v~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~~  145 (345)
T TIGR00748       108 LEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQGA  145 (345)
T ss_pred             HHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeecccC
Confidence            99999999999999999999999999999999999754

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.60  E-value=4.3e-15  Score=127.41  Aligned_cols=109  Identities=12%  Similarity=-0.028  Sum_probs=96.6

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      +|.+.+|+...+++++.+|+.+|++.+|+++|++|++||.+++++..++...|..+..++..+|++..+++++++.+|++
T Consensus        45 ~~Gi~~R~~~~~~e~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~~~C~g  124 (353)
T PRK12880         45 VIGLNTRYICDENTCVSDLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLGQACAG  124 (353)
T ss_pred             ccCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehhhhhHH
Confidence            36666666666788999999999999999999999999999999999887778899999999999767999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++|++.|.++|++|..+ +++.+.|.+|+
T Consensus       125 ~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~  153 (353)
T PRK12880        125 YLYGLFVAHSLIQSGLGK-ILLICGDTLSK  153 (353)
T ss_pred             HHHHHHHHHHHHHcCCCC-EEEEEehhhhc
Confidence            999999999999999888 55555787664

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.60  E-value=5.6e-15  Score=124.09  Aligned_cols=109  Identities=16%  Similarity=0.038  Sum_probs=93.8

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .+|.+.+++...+++++.+|+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++ +.++++++++|+
T Consensus        36 ~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~~C~  114 (326)
T PRK05963         36 RRTGIRCRRWAAPDETLSDLAASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAGACA  114 (326)
T ss_pred             hccCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccchhh
Confidence            5677776666667899999999999999999999999999999999887655677888899999997 689999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|++.|.++++++..+++|+ +.|+++.
T Consensus       115 g~~~aL~~A~~~l~~~~~~aLVv-~~d~~s~  144 (326)
T PRK05963        115 GFLYALVLADGFVRAQGKPVLVV-AANILSR  144 (326)
T ss_pred             HHHHHHHHHHHHHHcCCCeEEEE-Eechhhc
Confidence            99999999999999987555554 5587663

>PRK07855 lipid-transfer protein; Provisional

Probab=99.60  E-value=1.1e-14  Score=126.27  Aligned_cols=105  Identities=14%  Similarity=0.051  Sum_probs=89.9

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      .+|+|+|.+.|||+++    .+.++.||+.+|++++|+++||+++|||.+++++..  .   .....++..+|++...|.
T Consensus         4 ~~v~IvG~g~t~~~r~----~~~~~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~---~~~~~l~~~lGl~~~~~~   74 (386)
T PRK07855          4 GKAAIVGIGATEFSKN----SGRSELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--T---NPEIAVARALGIGELKFF   74 (386)
T ss_pred             CCEEEEEeeecccccC----CCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--c---ccHHHHHHHCCCCCCcce
Confidence            5799999999999987    467899999999999999999999999999864321  1   122457778899622677


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEee
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQ  151 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~  151 (160)
                      .+|+.+|+|+..++..|+..|++|.+|++++.|.
T Consensus        75 ~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~  108 (386)
T PRK07855         75 SRIHYGGGAACATVQQAAMAVATGVADVVVCYRA  108 (386)
T ss_pred             eeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEee
Confidence            8999999999999999999999999999999988

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.58  E-value=1.4e-14  Score=121.75  Aligned_cols=110  Identities=11%  Similarity=0.009  Sum_probs=94.8

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCC-CCceEEEcccC
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPN-EVPASLVNMLC  124 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~-~vPa~~V~~aC  124 (160)
                      .+|.+.+++... ++++.+|+.+|++++|+++|++|++||.+++++..++...|..+..++..+|++. .+|+++++.+|
T Consensus        37 ~~~Gi~~R~~~~-~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~~~C  115 (329)
T PRK07204         37 KKSGVKTRHFVD-GETSSYMGAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDINSTC  115 (329)
T ss_pred             hccCceEEeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEccchh
Confidence            356666555444 7899999999999999999999999999999987765445677888889999974 37999999999


Q ss_pred             ccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         125 GSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       125 aSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +|++.|+..|.++|++|..+.+++.+.|+++.
T Consensus       116 ~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~  147 (329)
T PRK07204        116 LSFITALDTISYAIECGRYKRVLIISSEISSV  147 (329)
T ss_pred             HHHHHHHHHHHHHHHCCCCCEEEEEEeccccC
Confidence            99999999999999999999999999999875

>PRK07937 lipid-transfer protein; Provisional

Probab=99.57  E-value=2.8e-14  Score=122.67  Aligned_cols=113  Identities=12%  Similarity=-0.024  Sum_probs=86.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCH-HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCC-hHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKA-HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQN-PARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~-~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~-~ar~~al~~GLp~~  114 (160)
                      |++|+|+|.+.|||+++.   .+.+. .||+.+|++++|+++||+++|||.++.++. ....+.. .........|+...
T Consensus         1 M~~vaIvG~g~t~~~~~~---~~~~~~~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~   76 (352)
T PRK07937          1 MRDVAVVGFAQAPHVRRT---DGTTNGVEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPP   76 (352)
T ss_pred             CCcEEEEEeeccccccCC---CCCCcHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCC
Confidence            468999999999999863   13444 899999999999999999999998754322 1112211 11223455677335


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .|...+++   +|..|+..|+..|+||..|++++.|.|||+.
T Consensus        77 ~~~~~v~~---~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~  115 (352)
T PRK07937         77 INESHVEM---DAAWALYEAWVKLLTGEVDTALVYGFGKSSA  115 (352)
T ss_pred             CceEEecC---cHHHHHHHHHHHHhcCCCCEEEEEEecccCc
Confidence            77777774   7899999999999999999999999999974

>PRK04262 hypothetical protein; Provisional

Probab=99.57  E-value=1.5e-14  Score=123.14  Aligned_cols=108  Identities=13%  Similarity=0.088  Sum_probs=94.6

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      +|.+.+++.+..+.++.+|+.+|++++|+++|++|++||.+++++..+....+..+..++..+|++..+|+++++.+|+|
T Consensus        36 ~~Gi~~R~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~~~C~~  115 (347)
T PRK04262         36 GLGVEEKSVPGPDEDTATIAVEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLEFACKA  115 (347)
T ss_pred             ccCeeeeecCCCCcCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHHHhHHH
Confidence            56666677777889999999999999999999999999999998877665556667788888999756899999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      ++.|++.|..+|++|..+.+++.+.|+.
T Consensus       116 ~~~aL~~A~~~i~sg~~~~aLVv~~e~~  143 (347)
T PRK04262        116 GTAALQAAMGLVKSGMIKYALAIGADTA  143 (347)
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEEEEeee
Confidence            9999999999999998888888888874

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.55  E-value=7.3e-14  Score=124.97  Aligned_cols=117  Identities=12%  Similarity=-0.022  Sum_probs=97.3

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC--ccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL--PNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~--~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      .+.++|+|.+.|+|+++... ...++.||+.+|++++|+++|++  +++||.+++++.... ...+.++.++..+|+. .
T Consensus         3 ~~~~~IVGvG~t~~~~~~~~-~~~s~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~-~~~~~~~~la~~lGl~-p   79 (498)
T PRK08257          3 PRTPVIVGVGQVTERPDDPA-YGLEPVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSW-RYRDPPGLLAERLGAD-P   79 (498)
T ss_pred             CCcEEEEEeeecccccCCcc-cCCCHHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccc-cccCHHHHHHHHcCCC-C
Confidence            35799999999999875311 11378999999999999999999  999999999876432 2334667888899995 6


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .+......+|+|+..+++.|+..|++|..++++++|.|+|+.
T Consensus        80 ~~~~~~~~GG~s~~~~v~~Aa~~IasG~advVLv~G~E~~~~  121 (498)
T PRK08257         80 ARTVYSPVGGNSPQRLVNEAALRIAAGEADVALVAGAEAQST  121 (498)
T ss_pred             cceeEecCCCHHHHHHHHHHHHHHHCCCCCEEEEeeeeeccc
Confidence            777777778888899999999999999999999999999964

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.53  E-value=6.8e-14  Score=112.30  Aligned_cols=93  Identities=25%  Similarity=0.293  Sum_probs=86.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      .++.+|+.+|++++|+++|+++++||.+++|+..++...+..+..++...|++ ..|+++++.+|+|++.|++.|.+.|+
T Consensus         5 ~~~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~~~C~s~~~al~~A~~~i~   83 (254)
T cd00327           5 ITASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVNQACATGLTALALAVQQVQ   83 (254)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceeccHhHHHHHHHHHHHHHHH
Confidence            44889999999999999999999999999999887654567888899999997 79999999999999999999999999


Q ss_pred             cCCCcEEEEEeecc
Q psy4156         140 LLTLHWLGNGAQYH  153 (160)
Q Consensus       140 sG~~~vlivgG~E~  153 (160)
                      +|..+.++++|.|+
T Consensus        84 ~g~~~~~lv~~~e~   97 (254)
T cd00327          84 NGKADIVLAGGSEE   97 (254)
T ss_pred             CCCCCEEEEEecce
Confidence            99999999999987

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK06840 hypothetical protein; Validated

Probab=99.52  E-value=6.1e-14  Score=118.52  Aligned_cols=110  Identities=16%  Similarity=0.015  Sum_probs=92.4

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEee-ecCCCCCChHHHHHHHcCCCCCCceEEEcccC
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA-LTAGQGQNPARQASIKANIPNEVPASLVNMLC  124 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~-~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aC  124 (160)
                      .+|.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++. .++...+..+..++..+|++ ..|+++++++|
T Consensus        37 ~~~Gi~~r~~~~~~~~~~~la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~~~C  115 (339)
T PRK06840         37 EKFGIYEKPVPGPEDHTSDMAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIMAVC  115 (339)
T ss_pred             hhcCcceEeeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Ccccccccccc
Confidence            45677666666678999999999999999999999999999986543 34434556677888899997 78999999999


Q ss_pred             ccHHHHHHHHHHHHHc-CCCcEEEEEeeccccc
Q psy4156         125 GSGLKSVTLTSRQQVL-LTLHWLGNGAQYHITA  156 (160)
Q Consensus       125 aSGl~Al~~Aa~~I~s-G~~~vlivgG~E~mt~  156 (160)
                      +|++.|+..|+++|++ |..+.+++.+.|+++.
T Consensus       116 ~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~~s~  148 (339)
T PRK06840        116 ASFPIALKVAKDLLYSDPSIENVLLVGGYRNSD  148 (339)
T ss_pred             hHHHHHHHHHHHHHhcCCCccEEEEEeeccccc
Confidence            9999999999999999 8888887788887754

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.49  E-value=1.5e-13  Score=117.98  Aligned_cols=94  Identities=15%  Similarity=0.050  Sum_probs=82.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHc
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~s  140 (160)
                      +..+|+.+|++++|+++|++|++||.+++++..++...+..+..++..+|+.  .|+++++.+|+||+.|+..|+++|++
T Consensus        94 ~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~~aCasg~~al~~A~~~i~~  171 (372)
T PRK07515         94 IQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMNVACSSATFGIQTAANAIRS  171 (372)
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEecchhHHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999998766544455566777888885  68999999999999999999999999


Q ss_pred             CCCcEEEEEeeccccc
Q psy4156         141 LTLHWLGNGAQYHITA  156 (160)
Q Consensus       141 G~~~vlivgG~E~mt~  156 (160)
                      |..+.++++|.|+|+.
T Consensus       172 g~~~~vLvv~~e~~s~  187 (372)
T PRK07515        172 GSARRVLVVNPEICSG  187 (372)
T ss_pred             CCCCEEEEEeeecccc
Confidence            9999999999999984

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=99.46  E-value=2.1e-13  Score=116.33  Aligned_cols=95  Identities=13%  Similarity=0.123  Sum_probs=85.1

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~  139 (160)
                      ++.+|+.+|++.+|+++|++|++||.+++++..+ ...|..+..++..+|++..+++++++ ++|+|++.|++.|..+++
T Consensus        84 ~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~-~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~  162 (361)
T cd00831          84 EARELAEEAARGALDEAGLRPSDIDHLVVNTSTG-NPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLE  162 (361)
T ss_pred             HHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCC-CCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998764 34567888888999997569999999 899999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      +|..+-+++.+.|++|.
T Consensus       163 ~~~~~~aLvv~~e~~s~  179 (361)
T cd00831         163 ANPGARVLVVSTELCSL  179 (361)
T ss_pred             HCCCCEEEEEEeecccc
Confidence            99878788888898876

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=99.45  E-value=3.4e-13  Score=112.34  Aligned_cols=102  Identities=20%  Similarity=0.192  Sum_probs=88.7

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCC----ccccCceEEEeeecCCC------------------
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVL----PNEISEVILGQALTAGQ------------------   97 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~----~~~ID~vi~G~~~~~~~------------------   97 (160)
                      ++|+|.+.+             ..+|+.+|++++|+++|++    +++||.+++|+..+...                  
T Consensus         2 ~~i~g~g~~-------------~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (332)
T cd00825           2 AVITGLGSY-------------VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVT   68 (332)
T ss_pred             ceEEcccHH-------------HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhh
Confidence            567777666             7889999999999999999    99999999998865432                  


Q ss_pred             ---CCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156          98 ---GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus        98 ---g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                         .+..+..++...|+  ..|+++++.+|+|++.|++.|.+.|++|..+.++++|+|.++.
T Consensus        69 ~~~~~~~a~~ia~~lgl--~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~  128 (332)
T cd00825          69 KAMFPGASGQIATPLGI--HGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAA  128 (332)
T ss_pred             cccchHHHHHHHHHhCC--CCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccC
Confidence               33457788888999  4799999999999999999999999999999999999998764

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=99.44  E-value=8.1e-13  Score=112.45  Aligned_cols=90  Identities=16%  Similarity=0.118  Sum_probs=78.8

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I  138 (160)
                      +.+..+|+.+|++.||+++|++++|||.+++|+. +.  .+..+..++..+|+    |.++++.+|+|+++|+..|+..|
T Consensus        47 EkAe~eLa~eAa~~ALekAGL~~~DID~IIvGdl-~~--Q~~~As~vA~~LGI----P~fdV~~ACSTf~~AL~lAa~lI  119 (327)
T TIGR02845        47 EKAERKLMEDAVNLALKKANLKKDDVDFFLAGDL-LN--QIITANFVARDLGI----PFLGLYGACSTSMETLALGAMLV  119 (327)
T ss_pred             chhHHHHHHHHHHHHHHHcCCCHHHCCEEEEeCC-CC--cccHHHHHHHHhCC----CEEEEeccCHHHHHHHHHHHHHH
Confidence            4567889999999999999999999999999974 22  23467778777775    67999999999999999999999


Q ss_pred             HcCCCcEEEEEeecccc
Q psy4156         139 VLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt  155 (160)
                      ++|.++.+++.+.|+++
T Consensus       120 ~SG~ad~VLVV~Ssh~S  136 (327)
T TIGR02845       120 DGGFADRVLAATSSHYA  136 (327)
T ss_pred             hCCCCCEEEEEEecccc
Confidence            99999999999988877

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>PRK08304 stage V sporulation protein AD; Validated

Probab=99.43  E-value=7.7e-13  Score=112.89  Aligned_cols=93  Identities=19%  Similarity=0.154  Sum_probs=80.5

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156          58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ  137 (160)
Q Consensus        58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~  137 (160)
                      ++....+|+.+|++.||+++|++++|||.++.|+...   .+..+..++..+|+    |+++|+.+|+|+++|+..|+..
T Consensus        52 wEkAeseLa~eAa~~ALekAGI~~~DID~lI~Gdll~---Q~~sAs~vA~~LGI----Pa~dV~gACST~~~AL~lAa~l  124 (337)
T PRK08304         52 WEKAERKMMEDAIQQALQKANLKKSDIDYLLAGDLLN---QIISANFAARELGI----PFLGLYGACSTMMESLALGSML  124 (337)
T ss_pred             ccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCC---CcchHHHHHHHhCC----cEEEEeccCHHHHHHHHHHHHH
Confidence            3567789999999999999999999999999997531   22455666666664    8999999999999999999999


Q ss_pred             HHcCCCcEEEEEeecccccC
Q psy4156         138 QVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       138 I~sG~~~vlivgG~E~mt~~  157 (160)
                      |++|.++.+++.+.|+++.+
T Consensus       125 I~SG~ad~VLVV~Ssh~s~a  144 (337)
T PRK08304        125 IDGGFADRVLAATSSHFATA  144 (337)
T ss_pred             HhcCCCCEEEEEEcchhhhh
Confidence            99999999999999999875

>PLN03168 chalcone synthase; Provisional

Probab=99.38  E-value=2.4e-12  Score=112.05  Aligned_cols=96  Identities=8%  Similarity=0.025  Sum_probs=85.7

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ...+|+.+|+++||+++|++|+|||.+|+++.++. ..|..+..++..+|++..+ .+++++.+|++|++|+..|..+++
T Consensus       100 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~  178 (389)
T PLN03168        100 QVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGV-NMPGADHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAE  178 (389)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC-CCccHHHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999998874 4678888999999997544 489999999999999999999999


Q ss_pred             cCCCcEEEEEeecccccC
Q psy4156         140 LLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~~  157 (160)
                      +|.+.-+++.++|.+|+.
T Consensus       179 ~~~~~~VLVV~~E~~S~~  196 (389)
T PLN03168        179 NNKGARVLAVASEVTAVT  196 (389)
T ss_pred             hCCCCEEEEEEEehhhhh
Confidence            998888888889998864

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=99.38  E-value=2.4e-12  Score=114.30  Aligned_cols=108  Identities=10%  Similarity=0.028  Sum_probs=88.9

Q ss_pred             eccccccCc--cCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHH---HHcCCCCCCceEEEc
Q psy4156          47 RTPIGSFLG--SLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQAS---IKANIPNEVPASLVN  121 (160)
Q Consensus        47 rTpfg~~~g--~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~a---l~~GLp~~vPa~~V~  121 (160)
                      +|.++.++-  +..+++..+|+.+|++.+|+++|++|++||.+++|+.++....+..+..++   ..+|.+ .+++++++
T Consensus        36 ~~GI~~r~~ava~~~Ed~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~  114 (459)
T PLN02577         36 TIGLGQDCMAFCTDVEDVISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST  114 (459)
T ss_pred             hhccceeEeccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh
Confidence            466665443  236899999999999999999999999999999999988766667776554   456775 79999999


Q ss_pred             ccCccHHHHHHHHHHHHHcCC--CcEEEEEeecccc
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLT--LHWLGNGAQYHIT  155 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~--~~vlivgG~E~mt  155 (160)
                      .+|.++..|++.|.++|++|.  .+-++|.|.|.++
T Consensus       115 ~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~a~  150 (459)
T PLN02577        115 NACYGGTAALLNCVNWVESSSWDGRYGLVVAADSAV  150 (459)
T ss_pred             hhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEechhh
Confidence            999999999999999999996  3666666667655

>PLN03169 chalcone synthase family protein; Provisional

Probab=99.36  E-value=2.2e-12  Score=112.20  Aligned_cols=97  Identities=7%  Similarity=0.010  Sum_probs=83.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQ  137 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~  137 (160)
                      ++++.+|+.+|++++|+++|++|++||.+++++. ++...|..+..++..+|++..+ ++++++.+|+++++|+..|+.+
T Consensus       103 ~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~-t~~~~P~~a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~  181 (391)
T PLN03169        103 NEAVTQMAVEASLACIKEWGRPVSDITHLVYVSS-SEARLPGGDLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDI  181 (391)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECc-CCCCCCcHHHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHH
Confidence            5667899999999999999999999999999886 4445677888999999997555 5899999999999999999999


Q ss_pred             HHcCCCcEEEEEeeccccc
Q psy4156         138 QVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       138 I~sG~~~vlivgG~E~mt~  156 (160)
                      +++|..+-+++.+.|.+|.
T Consensus       182 ~~~~~~~~vLvv~~e~~s~  200 (391)
T PLN03169        182 AENNPGSRVLLTTSETTIL  200 (391)
T ss_pred             HHhCCCCeEEEEEEEcChh
Confidence            9999666556667788764

>PLN03171 chalcone synthase-like protein; Provisional

Probab=99.36  E-value=3.6e-12  Score=111.21  Aligned_cols=96  Identities=11%  Similarity=-0.052  Sum_probs=83.7

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I  138 (160)
                      +++.+|+.+|++.+|+++|++|++||.+++++..+.. .|..+..++..+|++..+ +.+.+.++|+++++|+..|..+|
T Consensus       106 ~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~-~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li  184 (399)
T PLN03171        106 DAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAH-IPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLA  184 (399)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCC-CCchHHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999988764 577888999999997544 36778889999999999999999


Q ss_pred             HcCCCcEEEEEeeccccc
Q psy4156         139 VLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~  156 (160)
                      ++|.++-+++.+.|.+|+
T Consensus       185 ~~~~~~~vLVv~~e~~s~  202 (399)
T PLN03171        185 ENNRGARVLVVAAEITLL  202 (399)
T ss_pred             HhCCCCeEEEEEEecccc
Confidence            999777777778888774

>PLN02932 3-ketoacyl-CoA synthase

Probab=99.35  E-value=5.2e-12  Score=112.66  Aligned_cols=95  Identities=9%  Similarity=0.161  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s  140 (160)
                      +++|+.+|++++|+++|++|+|||.+|+.|..+. ..|..+..++.+.|++.++++++++ .+|++|+.|+..|.+++++
T Consensus       148 a~~la~~Aa~~aL~~agi~p~dId~lIv~tst~~-~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~  226 (478)
T PLN02932        148 TEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFN-PTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQV  226 (478)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHc
Confidence            7899999999999999999999999999998875 5678889999999997689999999 9999999999999999999


Q ss_pred             CCCcEEEEEeecccccC
Q psy4156         141 LTLHWLGNGAQYHITAD  157 (160)
Q Consensus       141 G~~~vlivgG~E~mt~~  157 (160)
                      +...-++|.+.|.+|+-
T Consensus       227 ~~~~~aLVVstE~~S~~  243 (478)
T PLN02932        227 HRNTYALVVSTENITQN  243 (478)
T ss_pred             CCCCeEEEEEEeecccc
Confidence            98888888899999864

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=99.35  E-value=8.5e-12  Score=107.96  Aligned_cols=110  Identities=12%  Similarity=0.036  Sum_probs=91.6

Q ss_pred             EEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE
Q psy4156          41 VIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV  120 (160)
Q Consensus        41 ~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V  120 (160)
                      ++.+.+.+.+...   ..+++..+|+.+|++.+|+++  +|++||.+++|+..+....+..+..++..+|++..++++++
T Consensus        31 ~~~g~G~~~~~~~---~~~ed~~~la~~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv  105 (379)
T TIGR01835        31 FHIGIGQKKMAVP---PIDEDIVTMAASAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFEL  105 (379)
T ss_pred             HHhhcCceEEeeC---CCCCCHHHHHHHHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEe
Confidence            3445455554432   357889999999999999998  89999999999988765556788899999999767999999


Q ss_pred             cccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         121 NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       121 ~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +++|+||..|++.|.++|++|..+.++|.+.|...
T Consensus       106 ~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~a~  140 (379)
T TIGR01835       106 KQACYGATAALQMAKGHVALSPDRKVLVIASDIAK  140 (379)
T ss_pred             ccccHHHHHHHHHHHHHHHcCCCCeEEEEEeehhh
Confidence            99999999999999999999977777777778754

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PLN02377 3-ketoacyl-CoA synthase

Probab=99.29  E-value=1.8e-11  Score=109.85  Aligned_cols=96  Identities=15%  Similarity=0.172  Sum_probs=85.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~  139 (160)
                      .+++|+.+|++++|+++|++|+|||.+++ ++.+....|..+..++.+.|++.++++++++ .+|++|+.|+..|.++++
T Consensus       171 ea~~l~~~A~~~aL~kaGi~p~dID~LVv-~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~  249 (502)
T PLN02377        171 EAEQVMFGALDNLFANTNVNPKDIGILVV-NCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQ  249 (502)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEE-ECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHH
Confidence            46789999999999999999999999987 5555445688899999999997789999999 799999999999999999


Q ss_pred             cCCCcEEEEEeecccccC
Q psy4156         140 LLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~~  157 (160)
                      ++...-++|.+.|.+|..
T Consensus       250 ~~~~~~aLVVstE~~S~~  267 (502)
T PLN02377        250 VHRNTYAVVVSTENITQN  267 (502)
T ss_pred             cCCCCEEEEEEEeccccc
Confidence            998888888899998863

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=99.27  E-value=2.3e-11  Score=107.99  Aligned_cols=106  Identities=11%  Similarity=0.009  Sum_probs=85.5

Q ss_pred             eccccccC--ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH---cCCCCCCceEEEc
Q psy4156          47 RTPIGSFL--GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK---ANIPNEVPASLVN  121 (160)
Q Consensus        47 rTpfg~~~--g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~---~GLp~~vPa~~V~  121 (160)
                      ++.++.++  -...+++..+|+.+|++.+|++++++|++||.+++|+..+....+..+..++..   +|.+ .+.+++++
T Consensus        33 ~~GI~~rr~av~~~~Ed~~tma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~  111 (454)
T TIGR01833        33 TIGLGQTKMGFCTDREDINSLCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT  111 (454)
T ss_pred             eechhheecccCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc
Confidence            35555443  244689999999999999999999999999999999988876666677666653   4665 79999999


Q ss_pred             ccCccHHHHHHHHHHHHHcCC--CcEEEEEeecc
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLT--LHWLGNGAQYH  153 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~--~~vlivgG~E~  153 (160)
                      ++|.++..|+..|..+|++|.  .+-+||.+.|.
T Consensus       112 ~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi  145 (454)
T TIGR01833       112 NACYGGTAALFNAINWIESSSWDGRYALVVAGDI  145 (454)
T ss_pred             ccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence            999999999999999999995  34455555554

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>PLN03170 chalcone synthase; Provisional

Probab=99.26  E-value=1.5e-11  Score=107.46  Aligned_cols=95  Identities=9%  Similarity=0.009  Sum_probs=83.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ...+|+.+|+++||+++|++++|||.+++.+..+. ..|..+..++..+|++..+ .+++++.+|++++.|+..|..+++
T Consensus       105 ~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~-~~Ps~a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~  183 (401)
T PLN03170        105 EVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAE  183 (401)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-CCChHHHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHH
Confidence            45679999999999999999999999998887653 4677888999999998555 489999999999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      ++..+-+++.++|.+|.
T Consensus       184 ~~~~~~vLVV~~E~~S~  200 (401)
T PLN03170        184 NNRGARVLVVCSEITAV  200 (401)
T ss_pred             cCCCCeEEEEEEehhhh
Confidence            99877788888898874

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=99.26  E-value=4.9e-11  Score=102.62  Aligned_cols=91  Identities=20%  Similarity=0.148  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-------------------------CCCC-hHHHHHHHcCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-------------------------QGQN-PARQASIKANIP  112 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-------------------------~g~~-~ar~~al~~GLp  112 (160)
                      .+|+.++++++|+++|++++++|.    +++|+.....                         ...+ ++..++...|+ 
T Consensus        72 ~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl-  150 (407)
T TIGR03150        72 IQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGA-  150 (407)
T ss_pred             HHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCC-
Confidence            678999999999999999999998    5555432110                         0011 33456677787 


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                       .-|.++++.+|+||+.|+..|++.|++|..+++|++|+|++.
T Consensus       151 -~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~  192 (407)
T TIGR03150       151 -KGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAI  192 (407)
T ss_pred             -CCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcC
Confidence             478999999999999999999999999999999999999853

FabB sequences should fall well below the noise cutoff of this model.

>PRK12404 stage V sporulation protein AD; Provisional

Probab=99.25  E-value=2.1e-11  Score=103.79  Aligned_cols=88  Identities=15%  Similarity=0.181  Sum_probs=73.4

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ....+|+.+|++.||+++|++++|||.++.|+...+   ..++..++..+|    +|.++|+++|+|+++|+.+|+..|+
T Consensus        52 kAE~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ---~ipssfvar~LG----IP~~gV~gACSTg~eAL~lAa~~Va  124 (334)
T PRK12404         52 KAERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQ---ITPTSFAARTLG----IPYLGLFGACSTSMEGLALAALIVN  124 (334)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCC---cCcHHHHHHHhC----CCccceeecCHHHHHHHHHHHHHHH
Confidence            345689999999999999999999999999998722   234446666667    5679999999999999999999999


Q ss_pred             cCCCcEEEEEeeccc
Q psy4156         140 LLTLHWLGNGAQYHI  154 (160)
Q Consensus       140 sG~~~vlivgG~E~m  154 (160)
                      +|..+.+++...-+.
T Consensus       125 SG~Ad~VLavtsSH~  139 (334)
T PRK12404        125 SGGAKYVLTGASSHN  139 (334)
T ss_pred             cCCCCEEEEEeCccc
Confidence            998888888765543

>PLN02192 3-ketoacyl-CoA synthase

Probab=99.25  E-value=3.9e-11  Score=107.75  Aligned_cols=95  Identities=17%  Similarity=0.173  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s  140 (160)
                      ++.+...|++++|+++|++|+|||.+|+.|. +....|..+..++.+.|++.++++++++ .+|++|+.|+..|.+++++
T Consensus       176 a~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S-~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a  254 (511)
T PLN02192        176 AETVMFGAIDQLLAKTSVKPKDIGILIVNCS-LFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQV  254 (511)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHc
Confidence            4668999999999999999999999988754 4445678888999999997689999999 7999999999999999999


Q ss_pred             CCCcEEEEEeecccccC
Q psy4156         141 LTLHWLGNGAQYHITAD  157 (160)
Q Consensus       141 G~~~vlivgG~E~mt~~  157 (160)
                      +...-++|.+.|.+|.+
T Consensus       255 ~~~~~aLVVstE~~S~n  271 (511)
T PLN02192        255 HPNSYALVISMENITLN  271 (511)
T ss_pred             CCCCeEEEEEEEecccc
Confidence            98777888899999865

>PLN03173 chalcone synthase; Provisional

Probab=99.25  E-value=2.9e-11  Score=105.36  Aligned_cols=95  Identities=11%  Similarity=0.009  Sum_probs=83.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC-ceEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV-PASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v-Pa~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      .+.+|+.+|+++||+++|++|+|||.+++.+..+. ..|..+..++..+|++..+ +.+.++.+|+++..|+..|.++++
T Consensus       101 ~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~  179 (391)
T PLN03173        101 EVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAE  179 (391)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cccHHHHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHH
Confidence            35689999999999999999999999999887653 3577888899999998555 477889999999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      ++..+-++|.++|.+|.
T Consensus       180 ~~~~~~vLVV~~E~~S~  196 (391)
T PLN03173        180 NNKGARVLVVCSEITAV  196 (391)
T ss_pred             hCCCCeEEEEEEehhhh
Confidence            99888888889999884

>PLN03172 chalcone synthase family protein; Provisional

Probab=99.25  E-value=3.8e-11  Score=104.71  Aligned_cols=94  Identities=11%  Similarity=0.004  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I~s  140 (160)
                      ..+|+.+|+++||+++|+++++||.+++++.++. ..|..+..++..+|++..+. .+.++.+|+++..|+..|..++++
T Consensus       102 a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~-~~P~~a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~  180 (393)
T PLN03172        102 VPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGV-DMPGADYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAEN  180 (393)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCC-cCchHHHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHc
Confidence            5589999999999999999999999998887753 36778889999999985564 578899999999999999999999


Q ss_pred             CCCcEEEEEeeccccc
Q psy4156         141 LTLHWLGNGAQYHITA  156 (160)
Q Consensus       141 G~~~vlivgG~E~mt~  156 (160)
                      +.++-+++.+.|.+|+
T Consensus       181 ~~~~~vLVV~~E~~S~  196 (393)
T PLN03172        181 NAGSRVLVVCSEITAV  196 (393)
T ss_pred             CCCCeEEEEEEehhhh
Confidence            9888888889999885

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=99.23  E-value=7.6e-11  Score=102.05  Aligned_cols=92  Identities=18%  Similarity=0.179  Sum_probs=73.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecC---------------------C----CCCC-hHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTA---------------------G----QGQN-PARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~---------------------~----~g~~-~ar~~al~~GL  111 (160)
                      ...|+.++++++|+++|++++++|.    +++|+....                     .    ..++ .+..++...|+
T Consensus        72 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (411)
T PRK07314         72 FIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGA  151 (411)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCC
Confidence            3578899999999999999999984    666653211                     0    0112 44556777787


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      .  -|.++++.+|+||+.|+..|++.|++|..|++|+||+|.++
T Consensus       152 ~--Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~  193 (411)
T PRK07314        152 K--GPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAI  193 (411)
T ss_pred             C--CccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccC
Confidence            4  68999999999999999999999999999999999999864

>PLN02854 3-ketoacyl-CoA synthase

Probab=99.16  E-value=1.9e-10  Score=103.51  Aligned_cols=95  Identities=15%  Similarity=0.162  Sum_probs=82.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s  140 (160)
                      ++.+...|++++|+++|++|+|||.+|+.|. +....|..+.+++.+.|++.++.+++++ .+|++|+.|+..|.+++++
T Consensus       188 a~~v~~~~~~~lL~kaGi~p~dID~LIv~cS-~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~  266 (521)
T PLN02854        188 AEAVMFGALDSLFSKTGVKPRDIGILIVNCS-LFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKA  266 (521)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECC-CCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHh
Confidence            3456777888999999999999999998643 5445688899999999997789999999 8999999999999999999


Q ss_pred             CCCcEEEEEeecccccC
Q psy4156         141 LTLHWLGNGAQYHITAD  157 (160)
Q Consensus       141 G~~~vlivgG~E~mt~~  157 (160)
                      +...-++|.+.|.+|.+
T Consensus       267 ~~~~~aLVVstE~~S~~  283 (521)
T PLN02854        267 NPNSYAVVVSTENITLN  283 (521)
T ss_pred             CCCCeEEEEEEeeeecC
Confidence            98888888899999854

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.13  E-value=2.7e-10  Score=97.58  Aligned_cols=115  Identities=9%  Similarity=-0.045  Sum_probs=87.4

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcC-CCccccCceEEEeee-----cCCCCCChHHHHHHHcCCC
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRAN-VLPNEISEVILGQAL-----TAGQGQNPARQASIKANIP  112 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~ag-I~~~~ID~vi~G~~~-----~~~~g~~~ar~~al~~GLp  112 (160)
                      +.||.+  +|...+++. -.+.+..+|+.+|++++|++++ +++++||.++.....     +....+..+..++..+|++
T Consensus        45 ~~~i~~--~~~~~~~~~-~~~~r~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~  121 (348)
T PRK06147         45 GEWLIG--APVPLPPPW-RGPERLAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLR  121 (348)
T ss_pred             CCceEe--ecCcCCccc-CchHHHHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCC
Confidence            567774  555443322 1245778999999999999999 799999977764321     1111122456777888986


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ...|++++..+|+||++||..|+++|++|.++.+|++|+|.++.
T Consensus       122 ~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~  165 (348)
T PRK06147        122 LEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLT  165 (348)
T ss_pred             CCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccC
Confidence            55789999999999999999999999999999999999998764

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=99.11  E-value=1.5e-10  Score=100.31  Aligned_cols=91  Identities=19%  Similarity=0.142  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC-------------------CCChHHHHHHHcCCCCCCceEE
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ-------------------GQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~-------------------g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      ..|+.+|++++|+++|++++++|    .+++|+..+++.                   ....+..++...|+.  -|+++
T Consensus        88 ~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~~  165 (424)
T smart00825       88 QRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSVT  165 (424)
T ss_pred             HHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCccc
Confidence            34899999999999999999999    789887643221                   122555677788984  48999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      ++.+|+||++|+..|++.|++|..|++|++|+|.+.
T Consensus       166 v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~  201 (424)
T smart00825      166 VDTACSSSLVALHLACQSLRSGECDMALAGGVNLIL  201 (424)
T ss_pred             cccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecC
Confidence            999999999999999999999999999999999764

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=99.01  E-value=1.3e-09  Score=93.51  Aligned_cols=93  Identities=20%  Similarity=0.260  Sum_probs=76.4

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC--------------------------CCCChHHHHHHHcC
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG--------------------------QGQNPARQASIKAN  110 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~--------------------------~g~~~ar~~al~~G  110 (160)
                      +..+|+.++++++|+++|++++++|.    +++|+..+..                          .....+..++...|
T Consensus        70 ~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  149 (406)
T cd00834          70 RFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLG  149 (406)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhC
Confidence            34679999999999999999988776    5565543210                          01235677888889


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +.  -|+++++.+|+|+++|++.|+++|++|..+.+||+|+|.++
T Consensus       150 l~--g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~  192 (406)
T cd00834         150 LR--GPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALI  192 (406)
T ss_pred             CC--CcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCccccc
Confidence            84  69999999999999999999999999999999999999886

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=99.00  E-value=7.8e-10  Score=95.18  Aligned_cols=92  Identities=18%  Similarity=0.134  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-------------------CCCChHHHHHHHcCCCCCCceE
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-------------------QGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-------------------~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      ...|+.+|++++|+++|++++++|.    +++|+..++.                   .....+..++...|+.  -|.+
T Consensus        87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~  164 (421)
T cd00833          87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL  164 (421)
T ss_pred             HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence            4679999999999999999998886    6666653211                   0122556678888985  5999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +++.+|+|+++|+..|++.|++|..|++|++|+|.++
T Consensus       165 ~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~  201 (421)
T cd00833         165 TVDTACSSSLVALHLACQSLRSGECDLALVGGVNLIL  201 (421)
T ss_pred             eeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccC
Confidence            9999999999999999999999999999999999874

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PLN00415 3-ketoacyl-CoA synthase

Probab=98.99  E-value=2.7e-09  Score=94.92  Aligned_cols=96  Identities=14%  Similarity=0.124  Sum_probs=79.6

Q ss_pred             CHHHHHHH-HHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc-cCccHHHHHHHHHHHH
Q psy4156          61 KAHDLGST-AIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM-LCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        61 ~~~dL~~~-A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~-aCaSGl~Al~~Aa~~I  138 (160)
                      ...||+.. |++++|+++|++|+|||.+++.| .+....|..+..++.+.|++.++.+++++. +|++|..|+..|.+++
T Consensus       132 ~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~-T~~~~~Pslaa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll  210 (466)
T PLN00415        132 HESELVIFGALNSLFKKTGIEPREVGIFIVNC-SLFNPNPSLSSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLL  210 (466)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEC-cCCCCCchHHHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHH
Confidence            34556544 88899999999999999988654 443345778888888999987899999996 9999999999999999


Q ss_pred             HcCCCcEEEEEeecccccC
Q psy4156         139 VLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~~  157 (160)
                      +++...-+++.+.|.+|..
T Consensus       211 ~a~~~~~aLVVs~E~~S~~  229 (466)
T PLN00415        211 KANPNTYAVIVSTENMTLS  229 (466)
T ss_pred             HhCCCCEEEEEEEeccccc
Confidence            9998777788889988853

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=98.96  E-value=2.9e-09  Score=91.92  Aligned_cols=94  Identities=15%  Similarity=0.074  Sum_probs=74.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccc-cCc----eEEEeeecCC----------------------CC--CChHHHHHHHcCC
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNE-ISE----VILGQALTAG----------------------QG--QNPARQASIKANI  111 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~-ID~----vi~G~~~~~~----------------------~g--~~~ar~~al~~GL  111 (160)
                      +...|+.++++++|+++|+++++ ++.    +++|+.....                      ..  ..++..++...|+
T Consensus        71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (407)
T cd00828          71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS  150 (407)
T ss_pred             HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence            45678999999999999998876 553    4555532110                      00  2356677778888


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      . .-|.++++.+|+||++|+..|++.|++|..|++|++|+|+++
T Consensus       151 ~-~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~  193 (407)
T cd00828         151 S-HGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL  193 (407)
T ss_pred             C-CCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC
Confidence            3 478999999999999999999999999999999999999986

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=98.93  E-value=5.4e-09  Score=91.48  Aligned_cols=94  Identities=19%  Similarity=0.194  Sum_probs=73.6

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCC-ccccCceEEEeeecCCCCCC------------------------------hHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVL-PNEISEVILGQALTAGQGQN------------------------------PARQASI  107 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~-~~~ID~vi~G~~~~~~~g~~------------------------------~ar~~al  107 (160)
                      ..+..+|+..+++++|+++|++ +++++...+|++.+...+..                              ++..++.
T Consensus        74 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~  153 (421)
T PTZ00050         74 ESRATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAI  153 (421)
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHH
Confidence            3456889999999999999999 78888777777664432110                              1223334


Q ss_pred             HcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         108 KANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       108 ~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      ..|+.  =|.+++..+|+||++|+..|++.|++|..|++|+||+|++
T Consensus       154 ~~~l~--Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~  198 (421)
T PTZ00050        154 KHKLK--GPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEAS  198 (421)
T ss_pred             HhCCC--CcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECccccc
Confidence            44542  4889999999999999999999999999999999999985

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.87  E-value=1.1e-08  Score=89.09  Aligned_cols=90  Identities=19%  Similarity=0.172  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHcCCCcccc-C----ceEEEeeecCCC-------------------------CCC-hHHHHHHHcCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEI-S----EVILGQALTAGQ-------------------------GQN-PARQASIKANI  111 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~I-D----~vi~G~~~~~~~-------------------------g~~-~ar~~al~~GL  111 (160)
                      ..|+..+++++|+++|++++++ +    .+++|+......                         ..+ .+..++...|+
T Consensus        83 ~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  162 (424)
T PRK06333         83 ILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGF  162 (424)
T ss_pred             HHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCC
Confidence            4678899999999999998877 3    356665422100                         011 33456667788


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                        .-|+++++.+|+||+.|+..|++.|++|..|++||||+|++
T Consensus       163 --~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~  203 (424)
T PRK06333        163 --KGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAA  203 (424)
T ss_pred             --CCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence              48999999999999999999999999999999999999985

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.85  E-value=4.3e-08  Score=85.91  Aligned_cols=89  Identities=18%  Similarity=0.177  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC-------------------------CCCC-hHHHHHHHcCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG-------------------------QGQN-PARQASIKANIPN  113 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~-------------------------~g~~-~ar~~al~~GLp~  113 (160)
                      .++..+++++|+++|+++++.+    .+++|+..+..                         ..++ ++..++...|+. 
T Consensus        76 ~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~-  154 (414)
T PRK08722         76 QYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLR-  154 (414)
T ss_pred             HHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCC-
Confidence            4778899999999999765444    37777753211                         0012 556667777874 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                       =|.+++..+|+|++.||..|++.|++|..|++|+||+|..
T Consensus       155 -Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~  194 (414)
T PRK08722        155 -GPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKA  194 (414)
T ss_pred             -CCccccccccHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence             6999999999999999999999999999999999999974

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.76  E-value=3.6e-08  Score=85.89  Aligned_cols=91  Identities=19%  Similarity=0.165  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-----------------------------CC-ChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-----------------------------GQ-NPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-----------------------------g~-~~ar~~al~~GL  111 (160)
                      ...|+.+|++++|+++|+++++++.--+|...+...                             .+ .++..++...|+
T Consensus        72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  151 (406)
T PRK08439         72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL  151 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence            467899999999999999998887544444332110                             01 255667777888


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      .  -|.+++..+|+|++.|+..|++.|++|..|+++++|+|..
T Consensus       152 ~--Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~  192 (406)
T PRK08439        152 K--GPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESA  192 (406)
T ss_pred             C--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhc
Confidence            5  6779999999999999999999999999999999999963

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=98.75  E-value=2.3e-08  Score=86.81  Aligned_cols=93  Identities=20%  Similarity=0.183  Sum_probs=81.1

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH
Q psy4156          58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ  137 (160)
Q Consensus        58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~  137 (160)
                      .+++..-|+++|++.+|+|+++||++|+.|++|+-.+....=..+..++..+|+++.+-++++..+|-+|..||++|...
T Consensus        47 ~~ED~vTmaveAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~  126 (377)
T COG3425          47 WDEDAVTMAVEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVEFACYAGTAALQAAIGW  126 (377)
T ss_pred             CchhHHHHHHHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHH
Confidence            57888999999999999999999999999999997765443347788889999998899999999999999999999999


Q ss_pred             HHcCCC-cEEEEEe
Q psy4156         138 QVLLTL-HWLGNGA  150 (160)
Q Consensus       138 I~sG~~-~vlivgG  150 (160)
                      |.||.. +++++++
T Consensus       127 v~s~~~~~~LvI~s  140 (377)
T COG3425         127 VESGMISYGLVIGA  140 (377)
T ss_pred             HHcCCccceEEEee
Confidence            999955 5555554

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=98.74  E-value=5e-08  Score=85.14  Aligned_cols=88  Identities=16%  Similarity=0.053  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCc---cccCceEEEeeec----------------CCCC--------C-ChHHHHHHHcCCCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLP---NEISEVILGQALT----------------AGQG--------Q-NPARQASIKANIPN  113 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~---~~ID~vi~G~~~~----------------~~~g--------~-~~ar~~al~~GLp~  113 (160)
                      ...|+..|++++|+++|+++   +.+. +++|....                ....        + ..+..++...|+. 
T Consensus        80 ~~~lal~Aa~eAl~dAgl~~~~~~riG-vivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-  157 (410)
T PRK07103         80 SAQAALAAAREAWRDAALGPVDPDRIG-LVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-  157 (410)
T ss_pred             HHHHHHHHHHHHHHhcCcCCCCCCCEE-EEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC-
Confidence            45689999999999999863   4554 44553321                0000        1 1344566777884 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY  152 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E  152 (160)
                       -|++++..+|+|++.||..|++.|++|..|.+|++|.|
T Consensus       158 -G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~  195 (410)
T PRK07103        158 -GEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGAL  195 (410)
T ss_pred             -CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccc
Confidence             58899999999999999999999999999999999886

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=98.74  E-value=5.2e-08  Score=78.50  Aligned_cols=91  Identities=21%  Similarity=0.229  Sum_probs=71.1

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC-----ceEEEeeecCC----------C-------------CCC-hHHHHHHHcCCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEIS-----EVILGQALTAG----------Q-------------GQN-PARQASIKANIPN  113 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID-----~vi~G~~~~~~----------~-------------g~~-~ar~~al~~GLp~  113 (160)
                      ..|+..++++||+++|+++++++     .+++|+...+.          .             .++ ++..++...|+. 
T Consensus        88 ~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~-  166 (254)
T PF00109_consen   88 SRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGLR-  166 (254)
T ss_dssp             HHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB--
T ss_pred             hhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCCC-
Confidence            46899999999999999996543     26777765511          0             122 455777788884 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec-ccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY-HIT  155 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E-~mt  155 (160)
                       =|+++++.+|+||+.|+..|++.|++|..|++|+||+| .++
T Consensus       167 -G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~  208 (254)
T PF00109_consen  167 -GPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLS  208 (254)
T ss_dssp             -SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SS
T ss_pred             -Cccccccccccccccccchhcccccccccccccccccccccc
Confidence             78999999999999999999999999999999999999 543

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=98.70  E-value=9.2e-08  Score=84.23  Aligned_cols=91  Identities=20%  Similarity=0.153  Sum_probs=71.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCcc-----ccCceEEEeeecCCC-------------------------CC-ChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPN-----EISEVILGQALTAGQ-------------------------GQ-NPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~-----~ID~vi~G~~~~~~~-------------------------g~-~~ar~~al~~G  110 (160)
                      ...|+.+|+.++|+++|+++.     +...+++|+..+...                         .+ .++..++...|
T Consensus        93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g  172 (437)
T PLN02836         93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG  172 (437)
T ss_pred             HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence            457899999999999998642     355688887532210                         01 13445677778


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +.  -|.++|+.+|+||+.|+..|++.|++|..|++|+||+|++
T Consensus       173 l~--Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~  214 (437)
T PLN02836        173 FQ--GPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESS  214 (437)
T ss_pred             CC--CceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence            74  8999999999999999999999999999999999999974

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=98.66  E-value=2.2e-07  Score=75.95  Aligned_cols=96  Identities=11%  Similarity=0.062  Sum_probs=76.0

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I  138 (160)
                      ..+.+|+.+|++++|+++|++++||+.+++.++++. ..|.+--.+...+||+.++--+.+. .+|.+|..+|..|....
T Consensus        98 ~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~-~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~  176 (226)
T PF00195_consen   98 EEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGI-AAPGLDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIA  176 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSS-ECS-HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCc-CCCchhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHH
Confidence            346789999999999999999999999999887653 3456666777888998777755554 79999999999999988


Q ss_pred             HcCCCcEEEEEeeccccc
Q psy4156         139 VLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~  156 (160)
                      ++.-...+++..+|-+|+
T Consensus       177 ~~~p~a~VLvv~vElcsl  194 (226)
T PF00195_consen  177 RANPGARVLVVCVELCSL  194 (226)
T ss_dssp             HHSTT-EEEEEEEEEGGG
T ss_pred             hCCccceEEEEEEEeeEE
Confidence            888788888899998885

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=98.65  E-value=2.3e-07  Score=78.19  Aligned_cols=95  Identities=15%  Similarity=0.191  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I~s  140 (160)
                      ++.++..+++++|+++|++|+|||.+++.|.... ..|.++.++..+.|+..++-.+++. .+|++|+-++.+|.+.++.
T Consensus        83 ae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~-ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~  161 (290)
T PF08392_consen   83 AEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFN-PTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQA  161 (290)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCC-cCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHh
Confidence            5668899999999999999999999998887532 4578888999999998788888886 6999999999999999999


Q ss_pred             CCCcEEEEEeecccccC
Q psy4156         141 LTLHWLGNGAQYHITAD  157 (160)
Q Consensus       141 G~~~vlivgG~E~mt~~  157 (160)
                      --...+++...|.+|..
T Consensus       162 ~p~~~ALVVstE~~s~~  178 (290)
T PF08392_consen  162 HPNSYALVVSTENISAN  178 (290)
T ss_pred             CCCcEEEEEEEeecccc
Confidence            88888899999998864

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.62  E-value=3e-07  Score=79.95  Aligned_cols=87  Identities=20%  Similarity=0.193  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHcCCCc--cccCceEEEeeecCC----------------------------CCCC-hHHHHHHHcCCC
Q psy4156          64 DLGSTAIKEVLKRANVLP--NEISEVILGQALTAG----------------------------QGQN-PARQASIKANIP  112 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~--~~ID~vi~G~~~~~~----------------------------~g~~-~ar~~al~~GLp  112 (160)
                      .++..+++++|+++|+++  +.+ .+++|+..+..                            ..++ ++..++...|+.
T Consensus        58 ~~~~~a~~~Al~dagl~~~~~~~-Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~  136 (381)
T PRK05952         58 DLTKTVVTAALKDAGLTPPLTDC-GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQ  136 (381)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCE-EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCC
Confidence            466789999999999975  333 46777743210                            0011 455677777874


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                        =|.+++..+|+||+.|+..|++.|++|..|+.|+||+|.
T Consensus       137 --Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~  175 (381)
T PRK05952        137 --GPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEA  175 (381)
T ss_pred             --CccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence              589999999999999999999999999999999999996

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.50  E-value=6.9e-07  Score=78.24  Aligned_cols=90  Identities=16%  Similarity=0.066  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC-------------------------------------CC-
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ-------------------------------------GQ-   99 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~-------------------------------------g~-   99 (160)
                      ...|+..|++++|+++|+++++.+    .+++|+..+...                                     .+ 
T Consensus        73 ~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n  152 (398)
T PRK06519         73 WQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLSN  152 (398)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhhh
Confidence            455888999999999999654322    256777543210                                     01 


Q ss_pred             ChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       100 ~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      ..+..++...|+.  =|.+++..+|+||++||..|++.|++|..|+.|+||+|.
T Consensus       153 ~~a~~is~~~gl~--Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~  204 (398)
T PRK06519        153 LLAGNISIVHKVT--GSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYN  204 (398)
T ss_pred             HHHHHHHHHhCCC--CccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeecc
Confidence            1445677778874  699999999999999999999999999999999999986

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=98.49  E-value=5.5e-07  Score=70.90  Aligned_cols=85  Identities=13%  Similarity=0.193  Sum_probs=68.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC--CCCceEEEcccCccHHHHHHHHH
Q psy4156          58 SELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP--NEVPASLVNMLCGSGLKSVTLTS  135 (160)
Q Consensus        58 ~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp--~~vPa~~V~~aCaSGl~Al~~Aa  135 (160)
                      .++++..|+..|++.+|++.+++|++|+.+++|+=..--..=.++.++...+|++  ..+-++++.++|-+|..|++.|.
T Consensus        49 ~~ED~vTmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~  128 (174)
T PF01154_consen   49 PDEDIVTMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAV  128 (174)
T ss_dssp             TTS-HHHHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHH
T ss_pred             CcccHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHH
Confidence            5788999999999999999999999999999998543222223777888889984  24567899999999999999999


Q ss_pred             HHHHcCC
Q psy4156         136 RQQVLLT  142 (160)
Q Consensus       136 ~~I~sG~  142 (160)
                      ..|+++.
T Consensus       129 ~~v~s~~  135 (174)
T PF01154_consen  129 NWVASSP  135 (174)
T ss_dssp             HHHCSTT
T ss_pred             HHHhcCC
Confidence            9999984

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.48  E-value=9.1e-07  Score=77.71  Aligned_cols=50  Identities=12%  Similarity=-0.072  Sum_probs=44.9

Q ss_pred             hHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156         101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY  152 (160)
Q Consensus       101 ~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E  152 (160)
                      .+..++...|+.  -|+++++.+|+|++.|+..|++.|++|.+|.+||+|+|
T Consensus       154 ~a~~i~~~~gl~--G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d  203 (425)
T PRK06501        154 IADRLADRFGTR--GLPISLSTACASGATAIQLGVEAIRRGETDRALCIATD  203 (425)
T ss_pred             HHHHHHHHhCCC--CCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeec
Confidence            455567777884  68899999999999999999999999999999999999

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=98.47  E-value=8.4e-07  Score=80.55  Aligned_cols=88  Identities=13%  Similarity=0.088  Sum_probs=68.1

Q ss_pred             HHHHHHHHHHHHHcCCCcccc---C----ceEEEeeecCCC------------------------CCC-hHHHHHHHcCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEI---S----EVILGQALTAGQ------------------------GQN-PARQASIKANI  111 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~I---D----~vi~G~~~~~~~------------------------g~~-~ar~~al~~GL  111 (160)
                      .++..+++++|+++|++++.+   +    .+++|+..+...                        ..+ .+..++...|+
T Consensus       201 ~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl  280 (540)
T PLN02787        201 LYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGW  280 (540)
T ss_pred             HHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCC
Confidence            366789999999999986532   2    478887643210                        011 23456667787


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      .  -|.++++.+|+|++.|+..|++.|++|..|+.|+||+|.
T Consensus       281 ~--Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~  320 (540)
T PLN02787        281 M--GPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDA  320 (540)
T ss_pred             C--CCccccccccccHHHHHHHHHHHHHcCCCCEEEEecccc
Confidence            4  789999999999999999999999999999999999995

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=98.45  E-value=1.1e-06  Score=77.06  Aligned_cols=91  Identities=12%  Similarity=0.095  Sum_probs=69.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC----------------C----------C-CChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG----------------Q----------G-QNPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~----------------~----------g-~~~ar~~al~~G  110 (160)
                      ...++..|++++|+++|+++++.+.    +++|+..+..                .          . ..++..++...|
T Consensus        71 ~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~  150 (406)
T PRK07967         71 ASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFK  150 (406)
T ss_pred             HHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHC
Confidence            3457889999999999997654432    5566532110                0          0 114455677778


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +.  =|.+++..+|+||+.|+..|++.|++|+.|+.|+||+|..
T Consensus       151 l~--Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~  192 (406)
T PRK07967        151 IK--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEEL  192 (406)
T ss_pred             CC--CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            74  6899999999999999999999999999999999999864

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.44  E-value=8.6e-07  Score=77.51  Aligned_cols=91  Identities=11%  Similarity=0.072  Sum_probs=69.2

Q ss_pred             HHHHHHHHHHHHHHcCCCc-cccC----ceEEEeeecCC---------------C----------CCC-hHHHHHHHcCC
Q psy4156          63 HDLGSTAIKEVLKRANVLP-NEIS----EVILGQALTAG---------------Q----------GQN-PARQASIKANI  111 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~-~~ID----~vi~G~~~~~~---------------~----------g~~-~ar~~al~~GL  111 (160)
                      ..|+..+++++|+++|++. +.++    .+++|+..+..               .          .++ ++..++...|+
T Consensus        74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~  153 (405)
T PRK09116         74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL  153 (405)
T ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence            4578899999999999843 2222    46777643210               0          011 45566777787


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      .  =|.+++..+|+|+++|+..|++.|++|+.|++|+||+|.++
T Consensus       154 ~--Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~  195 (405)
T PRK09116        154 K--GRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELC  195 (405)
T ss_pred             C--CCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchhcC
Confidence            4  69999999999999999999999999999999999999754

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=98.44  E-value=1.2e-06  Score=76.27  Aligned_cols=90  Identities=21%  Similarity=0.168  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC------------C-----C---------ChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ------------G-----Q---------NPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~------------g-----~---------~~ar~~al~~GL  111 (160)
                      ...|+..+++++|+++|++++.++    .+++|+..+...            +     +         ..+..++...|+
T Consensus        71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl  150 (399)
T cd00832          71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM  150 (399)
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence            356788999999999999877654    367776532210            0     0         133456666777


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      .  =|++++..+|+||+.|+..|++.|++|. |+.|+||+|..
T Consensus       151 ~--Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~  190 (399)
T cd00832         151 R--GPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSA  190 (399)
T ss_pred             C--CCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccc
Confidence            4  7999999999999999999999999999 99999999873

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.34  E-value=1.8e-06  Score=73.41  Aligned_cols=107  Identities=11%  Similarity=0.032  Sum_probs=82.5

Q ss_pred             ccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCcc
Q psy4156          48 TPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGS  126 (160)
Q Consensus        48 Tpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaS  126 (160)
                      +.|+.+...|- +.+..|+++|.|+||+.+++.|+|||.++..++++- ..|.+--.+...+||+..+--+-+. .+|+.
T Consensus        63 ~~f~ekN~ifi-e~a~~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~-~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaa  140 (356)
T COG3424          63 HGFGEKNEIFI-EEAVPLGVDALRRALDGSPLRPEDIDAVVTVTSTGL-ATPSLDARIVGELGLSPDTRRVPVWGLGCAA  140 (356)
T ss_pred             CChhhhhhhHH-HHHHHHHHHHHHHHhccCCCCHHHCcEEEEEeeccc-cCCChhHHHHhhcCCCCccceeeeecchhhh
Confidence            44665543332 346779999999999999999999999999988753 3455544566677997665544444 69999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |..++..|+.+.++.=...+++.++|-+|+
T Consensus       141 ga~glara~~y~ra~P~~~vlvV~vELCSL  170 (356)
T COG3424         141 GAAGLARARDYCRAAPDANVLVVCVELCSL  170 (356)
T ss_pred             hhhHHHHHHHHHhhCccceEEEEEeeeeee
Confidence            999999999999999667777778888775

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=98.32  E-value=3.1e-06  Score=72.74  Aligned_cols=90  Identities=16%  Similarity=0.121  Sum_probs=69.5

Q ss_pred             HHHHHHHHHHHHHHHcCC--CccccCceEEEeeecCC------------CC-------------C-ChHHHHHHHcCCCC
Q psy4156          62 AHDLGSTAIKEVLKRANV--LPNEISEVILGQALTAG------------QG-------------Q-NPARQASIKANIPN  113 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI--~~~~ID~vi~G~~~~~~------------~g-------------~-~~ar~~al~~GLp~  113 (160)
                      ...++..|++++++++|+  +++.+ .+++|+..+..            .+             + .++..++...|+. 
T Consensus         4 ~~~~~~~a~~~a~~~a~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~-   81 (342)
T PRK14691          4 WWRYKWITFHPSLTHADNTEKQERT-ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFK-   81 (342)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcccE-EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCC-
Confidence            456788999999999996  55665 46666653221            00             1 1445566777774 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                       =|.+++..+|+||+.||..|++.|++|+.|+.|+||.|..
T Consensus        82 -Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~  121 (342)
T PRK14691         82 -GPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAV  121 (342)
T ss_pred             -CCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccc
Confidence             7999999999999999999999999999999999999863

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.21  E-value=6.4e-06  Score=72.37  Aligned_cols=88  Identities=20%  Similarity=0.220  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHcCC---CccccCceEEEeeecCCC------------C-------------CC-hHHHHHHHcCCCCC
Q psy4156          64 DLGSTAIKEVLKRANV---LPNEISEVILGQALTAGQ------------G-------------QN-PARQASIKANIPNE  114 (160)
Q Consensus        64 dL~~~A~~~aL~~agI---~~~~ID~vi~G~~~~~~~------------g-------------~~-~ar~~al~~GLp~~  114 (160)
                      .++..+++++|+++|+   +++.+ .+++|+..+...            +             ++ ++..+....|+.  
T Consensus        85 ~~~l~aa~~AledAg~~~~~~~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~--  161 (418)
T PRK07910         85 RMSTVLGRRVWENAGSPEVDTNRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAK--  161 (418)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCC--
Confidence            4778899999999996   34444 356676532210            0             11 334556666653  


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      -|.+++..+|+|++.|+..|++.|++|..|+.|+||+|.+
T Consensus       162 G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~  201 (418)
T PRK07910        162 AGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETR  201 (418)
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEcccccc
Confidence            6889999999999999999999999999999999999874

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.13  E-value=1e-05  Score=78.56  Aligned_cols=88  Identities=20%  Similarity=0.195  Sum_probs=73.1

Q ss_pred             HHHHHHHHHHHHcCCCccccC----ceEEEeeecCCCCC-------------------ChHHHHHHHcCCCCCCceEEEc
Q psy4156          65 LGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQGQ-------------------NPARQASIKANIPNEVPASLVN  121 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~g~-------------------~~ar~~al~~GLp~~vPa~~V~  121 (160)
                      |.-+.+-++||++|++|+.+.    .|+.|....++...                   .++-.++...++.  =|++.|+
T Consensus        94 llLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~--GPs~~vd  171 (1061)
T COG3321          94 LLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLS--GPSVTVD  171 (1061)
T ss_pred             HHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCC--CCCcccc
Confidence            888999999999999999888    57888776654211                   1344456667874  7999999


Q ss_pred             ccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      .+|+|++.|+++|++.|++|..|++++||+--+
T Consensus       172 taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~  204 (1061)
T COG3321         172 TACSSSLVAVHLACQSLRLGECDLALAGGVNLV  204 (1061)
T ss_pred             chhhHHHHHHHHHHHHHHcCCCCEEEecceEec
Confidence            999999999999999999999999999999554

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=97.98  E-value=4e-05  Score=65.20  Aligned_cols=84  Identities=15%  Similarity=0.143  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLT  142 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~  142 (160)
                      ..|..+|++.+|++++++++|||.++.|-...+.   -.+...++.+    ++|-+-+-.+|++.+.++.+|+..|.+|.
T Consensus        52 ~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~---i~s~f~ar~l----~iPf~GlygACST~~e~l~laa~~vdgg~  124 (329)
T PF07451_consen   52 SKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQI---ISSSFAARDL----GIPFLGLYGACSTMMESLALAAMLVDGGF  124 (329)
T ss_dssp             HHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCC---CHHHHHHHHH----T--EEEB--CCCHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhh---HHHHHHHHhc----CCCccchhhHHHHHHHHHHHHHHHHhCCC
Confidence            4589999999999999999999999988765432   1233344433    47899999999999999999999999998


Q ss_pred             CcEEEEEeecc
Q psy4156         143 LHWLGNGAQYH  153 (160)
Q Consensus       143 ~~vlivgG~E~  153 (160)
                      .+-++++..-+
T Consensus       125 a~~vla~tSSH  135 (329)
T PF07451_consen  125 ADYVLAATSSH  135 (329)
T ss_dssp             -SEEEEEEEE-
T ss_pred             cceEEEEeccc
Confidence            88888776544

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.95  E-value=3.3e-05  Score=80.50  Aligned_cols=50  Identities=8%  Similarity=0.131  Sum_probs=43.5

Q ss_pred             HHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         102 ARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       102 ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      +..++...||.  =|+++|+.+|+|++.||++|++.|++|..|+.|+||++-
T Consensus       186 A~RIS~~f~L~--Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~  235 (2582)
T TIGR02813       186 SGRIANRFDLG--GMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCT  235 (2582)
T ss_pred             HHHHHHHhCCC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccee
Confidence            34455566663  689999999999999999999999999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.87  E-value=6.6e-05  Score=66.29  Aligned_cols=91  Identities=18%  Similarity=0.151  Sum_probs=66.6

Q ss_pred             CHHHHHHHHHHHHHHHcCCC-ccccC---ceEEEeeecCCC--------------------------CCC-hHHHHHHHc
Q psy4156          61 KAHDLGSTAIKEVLKRANVL-PNEIS---EVILGQALTAGQ--------------------------GQN-PARQASIKA  109 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~-~~~ID---~vi~G~~~~~~~--------------------------g~~-~ar~~al~~  109 (160)
                      +...|+..|+++|++++|++ .+..+   .+++|+......                          -++ .+..++...
T Consensus        70 ~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~  149 (412)
T COG0304          70 RFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVF  149 (412)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHh
Confidence            35678999999999999998 33343   234443322111                          011 234555666


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      |+.  =|.+++..+|+||.+||..|+++|++|+.|+.|+||.|.
T Consensus       150 g~~--G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~  191 (412)
T COG0304         150 GLK--GPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEA  191 (412)
T ss_pred             CCC--CCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEccccc
Confidence            763  678889999999999999999999999999999999976

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=97.76  E-value=5.7e-05  Score=51.57  Aligned_cols=39  Identities=8%  Similarity=-0.096  Sum_probs=33.6

Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++++|++++.|++.|..+|++|.++-+++.+.|+++.
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~   39 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSR   39 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc
Confidence            689999999999999999999999877788888888875

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=97.72  E-value=0.00012  Score=63.51  Aligned_cols=53  Identities=15%  Similarity=0.006  Sum_probs=47.5

Q ss_pred             hHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       101 ~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      .+..++...|+.  -|.+++..+|+|++.||..|++.|++|..+.+|++|+|.++
T Consensus       139 ~a~~ia~~lgl~--Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~  191 (392)
T PRK09185        139 LADFLRAYLGLS--GPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDSLC  191 (392)
T ss_pred             HHHHHHHHhCCC--CCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccC
Confidence            556778888885  49999999999999999999999999999999999999754

>KOG1394|consensus

Probab=97.58  E-value=0.00016  Score=62.95  Aligned_cols=90  Identities=23%  Similarity=0.233  Sum_probs=65.0

Q ss_pred             HHHHHHHHHHHHHHcCCCcc---ccCc----eEEEeeecCCC-----------------CC--------C-hHHHHHHHc
Q psy4156          63 HDLGSTAIKEVLKRANVLPN---EISE----VILGQALTAGQ-----------------GQ--------N-PARQASIKA  109 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~---~ID~----vi~G~~~~~~~-----------------g~--------~-~ar~~al~~  109 (160)
                      ..|+..|+++||+++++-+.   +.|.    |.+|+...+.+                 .|        | .+-+++.+.
T Consensus        95 ~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~  174 (440)
T KOG1394|consen   95 TKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKY  174 (440)
T ss_pred             HHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhh
Confidence            45888999999999987664   3343    33343322110                 01        1 123555566


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      ||.  -|..++..+|++|..++-.|.++|+.|..|+.++||.|..
T Consensus       175 gl~--GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~  217 (440)
T KOG1394|consen  175 GLR--GPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEAC  217 (440)
T ss_pred             cCc--CCchhhHhhhhhccchHHHHHHHHHhCccceeeccCccee
Confidence            663  6788899999999999999999999999999999999963

>KOG1393|consensus

Probab=95.28  E-value=0.095  Score=46.27  Aligned_cols=98  Identities=11%  Similarity=0.099  Sum_probs=71.8

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeec-CCCCCChHHHHHHHc--CCCCCCc
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT-AGQGQNPARQASIKA--NIPNEVP  116 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~-~~~g~~~ar~~al~~--GLp~~vP  116 (160)
                      -|-+|-+.+..|--   -..++...|...+.+.+++|.+|+++.|..+-+|+=+- +..-.--.-..++..  |-. .+-
T Consensus        41 KytIGLGq~~Mgfc---sdrEDi~Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNt-dIE  116 (462)
T KOG1393|consen   41 KYTIGLGQTQMGFC---SDREDIISLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DIE  116 (462)
T ss_pred             ceEeccCcceeccc---CchhhhhhhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCC-ccc
Confidence            45666666654411   12455778999999999999999999999999998542 211111123344443  654 789


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLL  141 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG  141 (160)
                      +++.-++|=+|..|+..|...|+|-
T Consensus       117 GiDttnACYGGtaALfnavnWiESs  141 (462)
T KOG1393|consen  117 GIDTTNACYGGTAALFNAVNWIESS  141 (462)
T ss_pred             cccccccccccHHHHHHHhhhhhhc
Confidence            9999999999999999999999995

>KOG1202|consensus

Probab=95.23  E-value=0.017  Score=57.34  Aligned_cols=90  Identities=16%  Similarity=0.095  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCCC-----C-----C----hHH-HHHHHcC--CCCCCceEEEc
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQG-----Q-----N----PAR-QASIKAN--IPNEVPASLVN  121 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~g-----~-----~----~ar-~~al~~G--Lp~~vPa~~V~  121 (160)
                      -.|..|+.-+|+-++||+|++..    .+++|+..+...+     +     +    .+| +.+.+..  ++-.=|++.++
T Consensus        88 ~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~D  167 (2376)
T KOG1202|consen   88 LRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSVD  167 (2376)
T ss_pred             HHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhhh
Confidence            45888999999999999998875    4688887654321     0     0    122 2222221  12246899999


Q ss_pred             ccCccHHHHHHHHHHHHHcCCCcEEEEEeec
Q psy4156         122 MLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY  152 (160)
Q Consensus       122 ~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E  152 (160)
                      .+|+|++.|++.|.+.|.+|+.|..||+|..
T Consensus       168 tacsSsl~al~~a~~~~r~gqcd~AiVaG~~  198 (2376)
T KOG1202|consen  168 TACSSSLMALQNAFQDIRSGQCDAAIVAGAN  198 (2376)
T ss_pred             hhhHHHHHHHHHHHHhhhccCCchhhhcccc
Confidence            9999999999999999999999999999875

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=92.56  E-value=0.84  Score=41.33  Aligned_cols=106  Identities=10%  Similarity=-0.129  Sum_probs=61.2

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC--C
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE--V  115 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~--v  115 (160)
                      +.|||.|.....-........+.........+++.+++++|+.++|||.+=+=.     ..+.......+.+||...  .
T Consensus       266 ~~V~i~g~a~~~~~~~~~~r~~~~~~~~~~~aa~~a~~~AGi~~~Did~~elyd-----cF~~~~~~~~E~LGl~~~g~~  340 (498)
T PRK08257        266 RWVYLHGGADAHDPYDILERPDLHRSPAIRAAGRRALALAGLGIDDIDAFDLYS-----CFPSAVQVAARELGLDLDDPR  340 (498)
T ss_pred             ceEEEEEEEEeeCccccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEecc-----CCHHHHHHHHHHcCcCCCCCC
Confidence            478998876542111100112222223345799999999999999999764311     122333445567888643  3


Q ss_pred             ceEEEc--------ccCccHHHHHHHHHHHHHcCCCcEEEEE
Q psy4156         116 PASLVN--------MLCGSGLKSVTLTSRQQVLLTLHWLGNG  149 (160)
Q Consensus       116 Pa~~V~--------~aCaSGl~Al~~Aa~~I~sG~~~vlivg  149 (160)
                      | +++.        -..++|+..+..+..+++....+..++.
T Consensus       341 p-vN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg~~~~~gLv~  381 (498)
T PRK08257        341 P-LTVTGGLPFFGGPGNNYVTHAIAEMVERLRANPGRRGLVT  381 (498)
T ss_pred             C-cCCCcChhhcCCchhhHHHHHHHHHHHHHhhcCCCEEEEE
Confidence            4 3333        2345577788888888885434444443

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=91.77  E-value=0.091  Score=35.97  Aligned_cols=58  Identities=21%  Similarity=0.155  Sum_probs=32.1

Q ss_pred             HHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc----ccCccHHHHHHHHHH
Q psy4156          74 LKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN----MLCGSGLKSVTLTSR  136 (160)
Q Consensus        74 L~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~----~aCaSGl~Al~~Aa~  136 (160)
                      |+++|++++|||.++.-+..     ....+.++...|+|.+....++.    -+|++-..++..+.+
T Consensus         1 L~~~g~~~~did~~i~hq~~-----~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~   62 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQAS-----KKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALE   62 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSS-----HHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred             CccccCCHHHCCEEEeCCCC-----HHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHH
Confidence            68999999999998864321     23455677788998553333333    344555555554444

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=90.42  E-value=0.67  Score=33.46  Aligned_cols=82  Identities=20%  Similarity=0.140  Sum_probs=44.5

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCC---CCCCceEEEc-----ccCccHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANI---PNEVPASLVN-----MLCGSGLK  129 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GL---p~~vPa~~V~-----~aCaSGl~  129 (160)
                      ..+...+ .++++++|++++++|++||.|.. ....... ...-.+.+....+-   ...+|...+-     ...+||+.
T Consensus        21 ~p~~~~~-~~~i~~al~~agi~~~~I~~i~~-hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~   98 (119)
T PF02801_consen   21 APNGAAL-ARAIRRALADAGISPEDIDYIEA-HGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLL   98 (119)
T ss_dssp             STTHHHH-HHHHHHHHHHHTS-GGGEEEEE-----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHH
T ss_pred             CcCHHHH-HHHHHHHHhhhccccccceeeee-eccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHH
Confidence            3344444 68899999999999999997643 2221110 11111122211111   1124544332     47888998


Q ss_pred             HHHHHHHHHHcCC
Q psy4156         130 SVTLTSRQQVLLT  142 (160)
Q Consensus       130 Al~~Aa~~I~sG~  142 (160)
                      .+..+...++.|.
T Consensus        99 ~l~~~~l~l~~~~  111 (119)
T PF02801_consen   99 SLAKALLALEHGT  111 (119)
T ss_dssp             HHHHHHHHHHHTE
T ss_pred             HHHHHHHHHhcCC
Confidence            9988888887763

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=89.22  E-value=1.1  Score=38.80  Aligned_cols=64  Identities=13%  Similarity=0.062  Sum_probs=38.7

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHc-----CCCCCCceEEEccc----CccHHHHHHHH
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKA-----NIPNEVPASLVNML----CGSGLKSVTLT  134 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~-----GLp~~vPa~~V~~a----CaSGl~Al~~A  134 (160)
                      ..++++++|+++|+.++|||.++.=+.     ....-+.++..+     |+|.+.--.++++.    |+|-.-++..+
T Consensus       274 ~~~~i~~~L~~~gl~~~DId~~v~Hq~-----n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~~a  346 (378)
T PRK06816        274 TIKPLLELVDKRNLDPDDIDYFLPHYS-----SEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLDEL  346 (378)
T ss_pred             HHHHHHHHHHHcCCChhhCCEEeeCcc-----cHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHHHH
Confidence            367788899999999999998774222     223444555544     78754323566543    33444444444

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=87.64  E-value=0.85  Score=39.50  Aligned_cols=51  Identities=18%  Similarity=0.175  Sum_probs=31.8

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceE
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVI   88 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi   88 (160)
                      ++++|.|.+.+..........+.....-...+++.+++++||+|+|||.+-
T Consensus       232 ~~v~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e  282 (389)
T PRK06064        232 TPVWIKASGQASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAE  282 (389)
T ss_pred             CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence            468899876653332211111221112234789999999999999999763

>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=87.32  E-value=0.96  Score=36.65  Aligned_cols=60  Identities=13%  Similarity=0.116  Sum_probs=41.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN  121 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~  121 (160)
                      -.+.....++++|.++++++.|+|.+.+++--+.+.|-.++-.++.-+.+..++|.+.|+
T Consensus        37 hse~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvs   96 (220)
T COG1214          37 HAERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVS   96 (220)
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeC
Confidence            457778899999999999999999999988544334433443333333333457777664

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=87.30  E-value=1.2  Score=37.97  Aligned_cols=81  Identities=15%  Similarity=0.110  Sum_probs=49.8

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-Cce-E---EE-cccCccHHHHHHHHHH
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPA-S---LV-NMLCGSGLKSVTLTSR  136 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa-~---~V-~~aCaSGl~Al~~Aa~  136 (160)
                      .+.+.++++++|+++|+.++|||.++.=+     .....-..+...+|+|.+ ++. +   ++ |..++|-.-++..+.+
T Consensus       207 ~~~~~~~~~~~L~~~gl~~~did~~i~Hq-----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~  281 (345)
T TIGR00748       207 FHHVVTAAKGLMEKLGLTPEDFDYAVFHQ-----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD  281 (345)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHcCEEEeCC-----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence            44455888899999999999999876521     122355567788899753 232 1   11 2345555566666665


Q ss_pred             HHHcCCCcEEEEE
Q psy4156         137 QQVLLTLHWLGNG  149 (160)
Q Consensus       137 ~I~sG~~~vlivg  149 (160)
                      .++.|. .+++.+
T Consensus       282 ~~~~Gd-~vll~~  293 (345)
T TIGR00748       282 IAEPGD-RILAVS  293 (345)
T ss_pred             hcCCCC-EEEEEE
Confidence            556665 344443

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>TIGR03285 methan_mark_14 putative methanogenesis marker protein 14

Probab=87.28  E-value=1  Score=39.76  Aligned_cols=67  Identities=24%  Similarity=0.362  Sum_probs=48.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCC-hHH------HHHHHcCCCCC--CceEEEccc
Q psy4156          57 LSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQN-PAR------QASIKANIPNE--VPASLVNML  123 (160)
Q Consensus        57 ~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~-~ar------~~al~~GLp~~--vPa~~V~~a  123 (160)
                      |..++..||......+++++++++.+|+|.|+=.+-...+ ..|. .+.      .=++.+|.|+.  +|.+++++.
T Consensus        60 LtresV~elV~dtl~e~~k~A~l~i~DL~FVVRSTGV~Agf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni  136 (445)
T TIGR03285        60 LTRESVAELVKDTLKESLKKAGLDIDDLDFVVRSTGVTAGFASPEEVGEMIKALADGCLKAGVPPSKMTPAMSKENI  136 (445)
T ss_pred             ccHHHHHHHHHHHHHHHHHHcCCChhhccEEEeccceeeccCCHHHHHHHHHHHHhHHHhcCCCchhcCCccCchhc
Confidence            5677889999999999999999999999999766544322 2121 221      23467899864  888988875

Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=86.84  E-value=7.1  Score=31.78  Aligned_cols=88  Identities=14%  Similarity=-0.051  Sum_probs=63.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-----------------------CCC-hHHHHHHHcCCCCCCce
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-----------------------GQN-PARQASIKANIPNEVPA  117 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-----------------------g~~-~ar~~al~~GLp~~vPa  117 (160)
                      ...|+.+++.+++++.    +++|.+++++..++..                       -.| ++-+.....+.  ..|.
T Consensus        34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~  107 (218)
T PF13723_consen   34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN  107 (218)
T ss_pred             HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence            4567777777777542    5677888887654321                       012 22344445554  5889


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +++..+=.|+.+|+..|+.+++.|...|+++..-|...
T Consensus       108 tal~a~~~sf~~aLleA~~~l~~~~~~VLlv~~De~~p  145 (218)
T PF13723_consen  108 TALAAGEDSFEAALLEAAAQLAEGAEPVLLVCYDEPLP  145 (218)
T ss_pred             EEEecCcchHHHHHHHHHHHHHcCCCCEEEEEeCCCCC
Confidence            99999999999999999999999988999998888654

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=86.74  E-value=1  Score=39.04  Aligned_cols=97  Identities=13%  Similarity=0.039  Sum_probs=53.6

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC---
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE---  114 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~---  114 (160)
                      ++++|.|.+........+...+.....-...|++.+++++|++|+|||.+-+=.     ......-...+.+|+.+.   
T Consensus       231 ~~~~I~g~g~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d-----~ft~~~l~~le~lGl~~~G~~  305 (385)
T PRK12578        231 SPVWITGIGYANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHD-----AFTIAEIMGYEDLGFTEKGKG  305 (385)
T ss_pred             CCeEEEEEEEecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecC-----cChHHHHHHHHHcCCCCCCch
Confidence            468999876643221111112222222345799999999999999999753311     111222334455676421   


Q ss_pred             --------------CceEEEccc--------CccHHHHHHHHHHHHHc
Q psy4156         115 --------------VPASLVNML--------CGSGLKSVTLTSRQQVL  140 (160)
Q Consensus       115 --------------vPa~~V~~a--------CaSGl~Al~~Aa~~I~s  140 (160)
                                    .| ++.+.+        -+||+.-+..+..+++-
T Consensus       306 ~~~~~~G~~~~~G~~p-vN~~GG~la~GhP~gatG~~~v~e~~~qLrg  352 (385)
T PRK12578        306 GKFIEEGQSEKGGKVG-VNLFGGLKAKGHPLGATGLSMIYEITKQLRD  352 (385)
T ss_pred             HHHHHCCCccCCCCee-eCCCCCcccCCCCccHHHHHHHHHHHHHHhC
Confidence                          12 222222        24577788888888873

>PRK09604 UGMP family protein; Validated

Probab=86.43  E-value=1.7  Score=37.18  Aligned_cols=84  Identities=14%  Similarity=-0.024  Sum_probs=50.5

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC----CChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHH
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG----QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g----~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I  138 (160)
                      .+.....++++|+++++++++||.+.++.--+.+.+    ...|+.++...    .+|...|+.     +.+.. ++..+
T Consensus        52 ~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~----~ipl~~v~h-----~~~ha-~~a~~  121 (332)
T PRK09604         52 VENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALAL----NKPLIGVNH-----LEGHL-LAPFL  121 (332)
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHh----CCCEEeecC-----HHHHH-Hhhhh
Confidence            567778899999999999999999888752111112    12344444433    356555543     33333 34456


Q ss_pred             HcCCCc---EEEEEeeccccc
Q psy4156         139 VLLTLH---WLGNGAQYHITA  156 (160)
Q Consensus       139 ~sG~~~---vlivgG~E~mt~  156 (160)
                      .+|..+   ++++.|.|+.+.
T Consensus       122 ~s~~~~~~lvl~vsGG~s~~~  142 (332)
T PRK09604        122 EEEPEFPFLALLVSGGHTQLV  142 (332)
T ss_pred             ccCCCCCEEEEEecCCccEEE
Confidence            788543   567777666554

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=86.29  E-value=4.1  Score=32.20  Aligned_cols=77  Identities=14%  Similarity=0.031  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHH-cCCCCCCce-----EEEcccCccHHHHHHHHHH
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIK-ANIPNEVPA-----SLVNMLCGSGLKSVTLTSR  136 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~-~GLp~~vPa-----~~V~~aCaSGl~Al~~Aa~  136 (160)
                      .+-..++++++|+++++.++|||.++.-...... .....+.+... .+.. .+|.     ..=|-.++|+...+..+..
T Consensus       144 ~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~G~~~~as~~~~l~~~~~  221 (254)
T cd00327         144 GEGLARAARKALEGAGLTPSDIDYVEAHGTGTPI-GDAVELALGLDPDGVR-SPAVSATLIMTGHPLGAAGLAILDELLL  221 (254)
T ss_pred             hHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCcc-ccHHHHHHHHHHhCCC-CCceeccccccccchHHHHHHHHHHHHH
Confidence            4556789999999999999999988764432211 11122221111 1110 1121     1124567778888888877


Q ss_pred             HHHcC
Q psy4156         137 QQVLL  141 (160)
Q Consensus       137 ~I~sG  141 (160)
                      ..+.+
T Consensus       222 ~~~~~  226 (254)
T cd00327         222 MLEHE  226 (254)
T ss_pred             HHhCC
Confidence            77664

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=85.72  E-value=5  Score=34.42  Aligned_cols=75  Identities=15%  Similarity=0.168  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHcCCCccccCceE-EEeeecCCCCCChHHHHHHHcCC-CCCCceEEE-----cccCccHHHHHHHHHHHH
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVI-LGQALTAGQGQNPARQASIKANI-PNEVPASLV-----NMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi-~G~~~~~~~g~~~ar~~al~~GL-p~~vPa~~V-----~~aCaSGl~Al~~Aa~~I  138 (160)
                      ..++++++|+++|++|+|||.+. .|+..+..+ ..-.+.+....|- +..+|...+     +-..+||+..+..+..++
T Consensus       277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D-~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l  355 (407)
T TIGR03150       277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGD-KAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAI  355 (407)
T ss_pred             HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCC-HHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHH
Confidence            56899999999999999999864 233332211 1112222222231 112343222     235778888888888888


Q ss_pred             HcC
Q psy4156         139 VLL  141 (160)
Q Consensus       139 ~sG  141 (160)
                      +.|
T Consensus       356 ~~~  358 (407)
T TIGR03150       356 RDG  358 (407)
T ss_pred             hcC
Confidence            876

FabB sequences should fall well below the noise cutoff of this model.

>PRK06158 thiolase; Provisional

Probab=85.50  E-value=1.5  Score=38.05  Aligned_cols=94  Identities=19%  Similarity=0.104  Sum_probs=53.2

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC---
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE---  114 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~---  114 (160)
                      ++++|.|....--........+... .-...+++++++++||+|+|||.+=+=-.     .+...-...+.+|+.+.   
T Consensus       229 ~~v~i~g~~~~~~~~~~~~~~~~~~-~~~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~~~Ge~  302 (384)
T PRK06158        229 PPVYVLGAAAATWHRQISSMPDLTV-TAAAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFCAKGEG  302 (384)
T ss_pred             CcEEEEEEEEecCCcccccccchhh-hHHHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCCCCCcH
Confidence            5799998654321111111122222 22467999999999999999997643111     11122333345565322   


Q ss_pred             --------------CceEEEc-------cc--CccHHHHHHHHHHHHHc
Q psy4156         115 --------------VPASLVN-------ML--CGSGLKSVTLTSRQQVL  140 (160)
Q Consensus       115 --------------vPa~~V~-------~a--CaSGl~Al~~Aa~~I~s  140 (160)
                                    .|   ||       .+  .++|+.-+..+..+++-
T Consensus       303 ~~~~~~G~~~~~G~~P---vN~sGG~ls~GhpgatG~~~~~E~~~QLrg  348 (384)
T PRK06158        303 GAFVEGGRIAPGGRLP---VNTNGGGLSCVHPGMYGLFLLIEAVRQLRG  348 (384)
T ss_pred             HHHHHCCCCccCCCcc---ccCCChhhcCCCCchhhHHHHHHHHHHHcC
Confidence                          24   44       22  26788888888888863

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=85.40  E-value=7.2  Score=33.84  Aligned_cols=74  Identities=19%  Similarity=0.180  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCCCCCCceEE-----EcccCccHHHHHHHHHHHHH
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANIPNEVPASL-----VNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GLp~~vPa~~-----V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ..++++++|+++|+.|+|||.+.. |+.++... ..-.+.+....|  ..+|...     =+-.++||+..+..+...++
T Consensus       262 ~~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D-~~E~~al~~~f~--~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~  338 (392)
T PRK09185        262 AILAMQQALADAGLAPADIGYINLHGTATPLND-AMESRAVAAVFG--DGVPCSSTKGLTGHTLGAAGAVEAAICWLALR  338 (392)
T ss_pred             HHHHHHHHHHHcCCCHHHccEEEeCCCCCcCCC-HHHHHHHHHHhC--CCCceeCCCcccccChhhcchHHHHHHHHHHh
Confidence            358999999999999999998532 22222111 122233333333  2344322     23578888888888888888


Q ss_pred             cCC
Q psy4156         140 LLT  142 (160)
Q Consensus       140 sG~  142 (160)
                      .|.
T Consensus       339 ~~~  341 (392)
T PRK09185        339 HGL  341 (392)
T ss_pred             cCC
Confidence            874

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=85.33  E-value=1.2  Score=36.90  Aligned_cols=44  Identities=11%  Similarity=0.131  Sum_probs=32.6

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      ..++++++|+++|+++++||.++.-+     .....-+.++..+|+|.+
T Consensus       221 ~~~~~~~~l~~~g~~~~di~~~~~h~-----~~~~~~~~~~~~lgi~~~  264 (318)
T TIGR00747       221 MGDVVEETLEANGLDPEDIDWFVPHQ-----ANLRIIEALAKRLELDMS  264 (318)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCHH
Confidence            45678889999999999999877422     122356677888899853

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=83.48  E-value=2  Score=36.67  Aligned_cols=52  Identities=19%  Similarity=0.226  Sum_probs=32.6

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEE
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVIL   89 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~   89 (160)
                      +.++|.|.....-........+.....-...|++.+|+++|+.++|||.+=+
T Consensus       225 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei  276 (375)
T cd00829         225 RPVWILGVGAASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAEL  276 (375)
T ss_pred             CCeEEEEEEEecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEe
Confidence            5788998766532222111111112233457999999999999999997643

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PF09887 DUF2114: Uncharacterized protein conserved in archaea (DUF2114); InterPro: IPR008303 There are currently no experimental data for members of this group or their homologues

Probab=83.37  E-value=2.1  Score=37.93  Aligned_cols=68  Identities=18%  Similarity=0.274  Sum_probs=48.9

Q ss_pred             cCCCCCHHHHHHHHHHHHHHHcCCCcc-ccCceEEEeeecCC-CCCC-hHH------HHHHHcCCCCC--CceEEEccc
Q psy4156          56 SLSELKAHDLGSTAIKEVLKRANVLPN-EISEVILGQALTAG-QGQN-PAR------QASIKANIPNE--VPASLVNML  123 (160)
Q Consensus        56 ~~~~~~~~dL~~~A~~~aL~~agI~~~-~ID~vi~G~~~~~~-~g~~-~ar------~~al~~GLp~~--vPa~~V~~a  123 (160)
                      .|..++..||......+++++++++.+ |+|.|+=.+-.-.+ ..|. .+.      .=++.+|.|+.  +|.+++++.
T Consensus        61 eLTrEsV~elVrdtl~e~~k~A~l~i~~DL~FVVRSTGVvAgf~speevg~~I~ALA~GCl~AGvPP~kMtp~Ms~~ni  139 (448)
T PF09887_consen   61 ELTRESVAELVRDTLLESHKKAHLDIKKDLDFVVRSTGVVAGFDSPEEVGEFIKALADGCLMAGVPPRKMTPPMSKNNI  139 (448)
T ss_pred             cccHHHHHHHHHHHHHHHHHHcCCCccccceEEEeecceeeccCCHHHHHHHHHHHHhhHHhcCCChhhcCCccchhhc
Confidence            356788899999999999999999997 99998766544322 2121 221      23467899864  889988875

The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.

>PRK07937 lipid-transfer protein; Provisional

Probab=83.29  E-value=13  Score=32.22  Aligned_cols=104  Identities=10%  Similarity=-0.047  Sum_probs=55.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      .++|+|.|..... ........+..+    ..+.+.++++ +|++|+|||.+=+=-     ......-...+.+|+....
T Consensus       224 ~~pv~I~g~~~~~-~~~~~~~~d~~~----~~~~~~a~~~aAgi~~~diD~~Ei~D-----~F~~~~l~~~e~lGl~g~~  293 (352)
T PRK07937        224 ERPAWITGIEHRI-ESPSLGARDLTR----SPSTALAAEAATGGDAGGVDVAELHA-----PFTHQELILREALGLGDKT  293 (352)
T ss_pred             CCcEEEEEEEEee-CCcccccccccc----HHHHHHHHHHhcCCCHHHCCEEEEeC-----CChHHHHHHHHHcCCCCCC
Confidence            3579999875531 111000112222    2334455555 599999999763311     1112223344567774334


Q ss_pred             ceEEE------cccCccHHHHHHHHHHHHHcCCCcEEEEEe
Q psy4156         116 PASLV------NMLCGSGLKSVTLTSRQQVLLTLHWLGNGA  150 (160)
Q Consensus       116 Pa~~V------~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG  150 (160)
                      |.-+-      +..-+||+.-+..+..+++.+..+..++-+
T Consensus       294 pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~~a~~~l~~~  334 (352)
T PRK07937        294 KVNPSGGALAANPMFAAGLERIGEAARHIWDGSARRALAHA  334 (352)
T ss_pred             CcCCCccchhcCchhHHHHHHHHHHHHHHhccCCCEEEEec
Confidence            42111      112336788888888999877667666543

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=83.04  E-value=5.8  Score=33.16  Aligned_cols=44  Identities=20%  Similarity=0.146  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      ..++++++|+++|+.++|||.++.=+.     +...-+.+...+|+|.+
T Consensus       232 ~~~~i~~~L~~~gl~~~did~~~~H~~-----~~~~~~~i~~~l~l~~e  275 (329)
T PRK07204        232 LMKFIDKLLMDAGYTLADIDLIVPHQA-----SGPAMRLIRKKLGVDEE  275 (329)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEeCCC-----CHHHHHHHHHHcCCCHH
Confidence            457889999999999999998765221     22355677788899854

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=81.60  E-value=4.1  Score=34.00  Aligned_cols=65  Identities=22%  Similarity=0.250  Sum_probs=41.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHH
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL  133 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~  133 (160)
                      +...++++++|+++|++++|||.++.=+     ....+-+.+...+|+|++.-..++.+--.++...+-.
T Consensus       227 ~~~~~~~~~~L~~~gl~~~did~~~~h~-----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~  291 (326)
T PRK05963        227 RMMSGASQNVLASAAMTPQDIDRFFPHQ-----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPL  291 (326)
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEeCC-----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHH
Confidence            3445678899999999999999876511     1234566777888998654334444433344333333

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=81.36  E-value=13  Score=32.16  Aligned_cols=79  Identities=16%  Similarity=0.122  Sum_probs=45.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEE-EeeecCCCCCChHHHHHHHcCC----CCCCceEEEc-----ccCccHHHHHH
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVIL-GQALTAGQGQNPARQASIKANI----PNEVPASLVN-----MLCGSGLKSVT  132 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~-G~~~~~~~g~~~ar~~al~~GL----p~~vPa~~V~-----~aCaSGl~Al~  132 (160)
                      .+-..++++.+|+++|+.|+|||.+.. |+..+... ..-.+.+....|.    ...+|...+-     -..+||+..+.
T Consensus       278 ~~~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d-~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~  356 (424)
T smart00825      278 GPAQARLIRQALARAGVDPADVDYVEAHGTGTPLGD-PIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLI  356 (424)
T ss_pred             HHHHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCC-HHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHH
Confidence            344568999999999999999998643 33322111 1112222222221    0123433332     34677787888


Q ss_pred             HHHHHHHcCC
Q psy4156         133 LTSRQQVLLT  142 (160)
Q Consensus       133 ~Aa~~I~sG~  142 (160)
                      .+..+++.|.
T Consensus       357 ~~~~~l~~~~  366 (424)
T smart00825      357 KVVLALRHGT  366 (424)
T ss_pred             HHHHHHhCCC
Confidence            8888888874

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=81.29  E-value=4.4  Score=34.01  Aligned_cols=71  Identities=15%  Similarity=0.129  Sum_probs=45.1

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHH-HHcC
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ-QVLL  141 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~-I~sG  141 (160)
                      ..++++++|+++|++++|||.++.-+     .....-+.++..+|+|.+.-..++.+--.++...+-.+... ++.|
T Consensus       228 ~~~~i~~~L~~~g~~~~did~~~~hq-----~~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~~~~g  299 (326)
T CHL00203        228 VPAVIIKCLNALNISIDEVDWFILHQ-----ANKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEAIQNN  299 (326)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHHHHhC
Confidence            45578899999999999999876522     12345667888899985433345555544444444444333 3445

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=81.27  E-value=2  Score=35.72  Aligned_cols=43  Identities=28%  Similarity=0.315  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      .++++++|+++|++++|||.++.-+.     +..+-+.++..+|+|.+
T Consensus       228 ~~~i~~~L~~~g~~~~did~~~~h~~-----~~~~~~~~~~~lg~~~~  270 (325)
T PRK12879        228 PKGARQVLEKAGLTKDDIDWVIPHQA-----NLRIIESLCEKLGIPME  270 (325)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEECCC-----CHHHHHHHHHHcCCCHH
Confidence            46788999999999999998875321     22355677788899754

>TIGR03725 bact_YeaZ universal bacterial protein YeaZ

Probab=80.94  E-value=1.6  Score=34.52  Aligned_cols=32  Identities=16%  Similarity=0.308  Sum_probs=26.9

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEee
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQA   92 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~   92 (160)
                      ...+.....++++|+++++.++|||.+.++.-
T Consensus        32 ~h~~~l~~~i~~~l~~~~~~~~~i~~iav~~G   63 (202)
T TIGR03725        32 NHSEILLPMIEELLAEAGLSLQDLDAIAVGVG   63 (202)
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEecC
Confidence            34567778999999999999999999888763

This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=80.70  E-value=6.1  Score=33.94  Aligned_cols=79  Identities=11%  Similarity=0.064  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEEcccCccHHHHHHHHHH-HHHcCCC
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLVNMLCGSGLKSVTLTSR-QQVLLTL  143 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V~~aCaSGl~Al~~Aa~-~I~sG~~  143 (160)
                      ....++++|+++|++++|||.+++=+     ....+-..+...+|+|.. ++...+++--.++...+-.+.. .+..|..
T Consensus       244 ~~~~i~~~L~~~gl~~~did~~v~HQ-----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~~~~~~~~~  318 (353)
T PRK12880        244 EPKSFKEILEFSKVDEKDIAFHLFHQ-----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLCELDTPKEF  318 (353)
T ss_pred             HHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHHHHHHcCCc
Confidence            34677899999999999999887521     122355677888899863 4433345555555555444443 3455766


Q ss_pred             cEEEEE
Q psy4156         144 HWLGNG  149 (160)
Q Consensus       144 ~vlivg  149 (160)
                      ++++++
T Consensus       319 ~~ll~~  324 (353)
T PRK12880        319 KASLSA  324 (353)
T ss_pred             EEEEEE
Confidence            766655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	160
1wl4_A	397	Human Cytosolic Acetoacetyl-Coa Thiolase Complexed		4e-26
2wl4_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-26
2wkv_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-26
2wl5_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-26
2wkt_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		5e-26
2wl6_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h-H		6e-26
2vu2_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Wit		6e-26
1dlu_A	389	Unliganded Biosynthetic Thiolase From Zoogloea Rami		6e-26
2wku_A	392	Biosynthetic Thiolase From Z. Ramigera. The N316h M		6e-26
2wl4_C	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		6e-26
1m1t_A	392	Biosynthetic Thiolase, Q64a Mutant Length = 392		3e-25
1m1o_A	392	Crystal Structure Of Biosynthetic Thiolase, C89a Mu		1e-24
1qfl_A	389	Biosynthetic Thiolase From Zoogloea Ramigera In Com		1e-24
2wl5_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		1e-24
2wl4_B	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		1e-24
1m4s_A	392	Biosynthetic Thiolase, Cys89 Acetylated, Unliganded		1e-24
2wl4_D	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		1e-24
2wkt_A	392	Biosynthetic Thiolase From Z. Ramigera. Complex Of		1e-24
4dd5_A	396	Biosynthetic Thiolase (Thla1) From Clostridium Diff		4e-24
4e1l_A	395	Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla		8e-23
2ib7_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		4e-21
2f2s_A	406	Human Mitochondrial Acetoacetyl-Coa Thiolase Length		7e-20
2ibu_A	395	Crystallographic And Kinetic Studies Of Human Mitoc		1e-19
1ulq_A	401	Crystal Structure Of Tt0182 From Thermus Thermophil		1e-11
3ss6_A	394	Crystal Structure Of The Bacillus Anthracis Acetyl-		4e-11
2wua_A	440	Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolas		7e-10
1wdk_C	390	Fatty Acid Beta-Oxidation Multienzyme Complex From		9e-10
2c7y_A	404	Plant Enzyme Length = 404		6e-09
2wu9_A	442	Crystal Structure Of Peroxisomal Kat2 From Arabidop		6e-09
2iik_A	418	Crystal Structure Of Human Peroxisomal Acetyl-Coa A		6e-08
3goa_A	387	Crystal Structure Of The Salmonella Typhimurium Fad		5e-07
1afw_A	393	The 1.8 Angstrom Crystal Structure Of The Dimeric P		4e-05
1pxt_A	390	The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoac		4e-05
3svk_A	407	Crystal Structure Of Acetyl-Coa Acetyltransferase F		7e-05

>pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With Coa Length = 397

Iteration: 1
 Score =  113 bits (283), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 61/101 (60%), Positives = 70/101 (69%)
Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           M    + VVIVSAART IGSF G+L+ +   DLGST IKEVLKRA V P ++SEVI G  
Sbjct: 1   MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHV 60
Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           L AG GQNP RQAS+ A IP  VPA    M+ GSGLK+V L
Sbjct: 61  LAAGCGQNPVRQASVGAGIPYSVPAWSCQMIXGSGLKAVCL 101

>pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316d Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n Mutant. Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S- Pantetheine-11-pivalate. Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera Length = 389

Iteration: 1
 Score =  113 bits (282), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 2   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 61
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 62  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 99

>pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant. Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  113 bits (282), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 72/98 (73%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant Length = 392

Iteration: 1
 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+G 
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGA 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N LCGSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQ 102

>pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant, Complexed With Acetoacetyl-Coa Length = 392

Iteration: 1
 Score =  108 bits (271), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQ 102

>pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex With A Reaction Intermediate. Length = 389

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 2   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 61
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 62  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 99

>pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348n Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 102

>pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 102

>pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form Length = 392

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 102

>pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The H348a Mutant With Coenzyme A Length = 392

Iteration: 1
 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 102

>pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The N316a Mutant With Coenzyme A. Length = 392

Iteration: 1
 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 54/98 (55%), Positives = 71/98 (72%)
Query: 40  VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ 99
           +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L AG+GQ
Sbjct: 5   IVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQ 64
Query: 100 NPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
           NPARQA++KA +P E  A  +N L GSGL++V L  +Q
Sbjct: 65  NPARQAAMKAGVPQEATAWGMNQLXGSGLRAVALGMQQ 102

>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile Length = 396

Iteration: 1
 Score =  107 bits (266), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 54/103 (52%), Positives = 74/103 (71%)
Query: 34  VLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQAL 93
           V++  +VVI SAART +GSF G+   + A +LG TA KE +KRAN+ P+ I E +LG  L
Sbjct: 3   VMNMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVL 62
Query: 94  TAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           TAG GQN ARQ ++ A IP E PA  +N++CGSGL+SV++ S+
Sbjct: 63  TAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQ 105

>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From Clostridium Difficile Length = 395

Iteration: 1
 Score =  102 bits (255), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 55/98 (56%), Positives = 65/98 (66%)
Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG 98
           DVVIVSA RTPIGSF G      A  LG+ A+KE + R  +  +EI EVI+G  L  G G
Sbjct: 6   DVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLG 65
Query: 99  QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
           QN ARQ +I A IPN VP+  VN LCGSGLKSV L ++
Sbjct: 66  QNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQ 103

>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-Coa Thiolase (T2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score = 97.1 bits (240), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 49/107 (45%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            +VVIVSA RTPIGSFLGSLS L A  LGS AI+  +++A +   E+ E  +G  L  G+
Sbjct: 8   KEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE 67
Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLH 144
           GQ P RQA + A +P   P + +N +C SG+K++ + S  Q L+  H
Sbjct: 68  GQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMAS--QSLMCGH 112

>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase Length = 406

Iteration: 1
 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 2/112 (1%)
Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           +V   ++VVIVSA RTPIGSFLGSLS L A  LGS AI+  +++A +   E+ E  +G  
Sbjct: 14  LVPRGSEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNV 73
Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLH 144
           L  G+GQ P RQA + A +P   P + +N +  SG+K++ + S  Q L+  H
Sbjct: 74  LQGGEGQAPTRQAVLGAGLPISTPCTTINKVXASGMKAIMMAS--QSLMCGH 123

>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human Mitochondrial Acetoacetyl-coa Thiolase (t2): The Importance Of Potassium And Chloride For Its Structure And Function Length = 395

Iteration: 1
 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 48/107 (44%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            +VVIVSA RTPIGSFLGSLS L A  LGS AI+  +++A +   E+ E  +G  L  G+
Sbjct: 8   KEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGE 67
Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLH 144
           GQ P RQA + A +P   P + +N +  SG+K++ + S  Q L+  H
Sbjct: 68  GQAPTRQAVLGAGLPISTPCTTINKVXASGMKAIMMAS--QSLMCGH 112

>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8 Length = 401

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 7/112 (6%)
Query: 42  IVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQN 100
           IV A RTPIG   G+L+ ++  DL + A+  ++ R+ V   E+ +V  G A  AG+  +N
Sbjct: 6   IVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRN 65
Query: 101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQY 152
            AR A + A  P EV    VN LCGSGL++V   +R        W G G  Y
Sbjct: 66  VARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARA------IWAGEGKVY 111

>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa Acetyltransferase Length = 394

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%)
Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           ++VVI +A R+PIG+F G+L  +   +L    ++E +KR  V P+E+ EVILG  +    
Sbjct: 5   HNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD 64
Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
             N AR A++ A  P+ V    +     SG++++   + Q
Sbjct: 65  EANTARTAALAAGFPDTVTGYTIQRQXSSGMQAIMSAAMQ 104

>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From Sunflower Length = 440

Iteration: 1
 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 38  NDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG 96
           +DVVIV+A R+P+  +  G L +    D+ +  +K ++++ N+ P E+ ++++G  L AG
Sbjct: 33  DDVVIVAAYRSPLCKAKRGGLKDTYPDDILAPVLKALIEKTNINPAEVGDIVVGSVLGAG 92
Query: 97  -QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            Q  +  R A+  A  P  VP   VN  C SGL++V
Sbjct: 93  SQRASECRMAAFYAGFPETVPVRTVNRQCSSGLQAV 128

>pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From Pseudomonas Fragi, Form I (Native2) Length = 390

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 35  LSDNDVVIVSAARTPIGSFLGSLSE-LKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQA 92
           L+  DVVIV   RTP+G   G +    +A D+ +  I +VL+R + V P E+ +VI G  
Sbjct: 2   LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCV 61
Query: 93  -LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNG 149
             T  QG N AR AS+   IP+   A  V+ LCGS + +  L +  Q ++T    GNG
Sbjct: 62  NQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSA--LHTAAQAIMT----GNG 113

>pdb|2C7Y|A Chain A, Plant Enzyme Length = 404

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 35  LSDNDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQAL 93
           L  +DVVIV+A RTP+  S  G+  +    DL +  ++ ++++ N+ P+E+ ++++G  L
Sbjct: 10  LYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVL 69
Query: 94  TAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
             G Q  +  R A+  A  P  V    VN  C SGL++V
Sbjct: 70  APGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAV 108

>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis Thaliana Length = 442

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 35  LSDNDVVIVSAARTPI-GSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQAL 93
           L  +DVVIV+A RTP+  S  G+  +    DL +  ++ ++++ N+ P+E+ ++++G  L
Sbjct: 27  LYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVL 86
Query: 94  TAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
             G Q  +  R A+  A  P  V    VN  C SGL++V
Sbjct: 87  APGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAV 125

>pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl Transferase 1 (Acaa1) Length = 418

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Query: 36  SDNDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           S  DVV+V   RT I  +  G   +    +L S  +  VLK  N+ P ++ ++ +G  L 
Sbjct: 28  SAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQ 87
Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
            G G   AR A   ++IP  VP S VN  C SGL++V
Sbjct: 88  PGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAV 124

>pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3- Ketoacyl-Coa Thiolase Length = 387

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 40  VVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLP----NEISEVILGQALT 94
           VVIV A RTP G S  G+   ++A DL +   + +L R   L     ++I    + Q L 
Sbjct: 4   VVIVDAIRTPXGRSKGGAFRNVRAEDLSAHLXRSLLARNPSLTAATLDDIYWGCVQQTLE 63
Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSR 136
             QG N AR A++ A IP+ VPA  VN LCGS  +++   +R
Sbjct: 64  --QGFNIARNAALLAEIPHSVPAVTVNRLCGSSXQALHDAAR 103

>pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric Peroxisomal Thiolase Of Saccharomyces Cerevisiae Length = 393

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 39  DVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRANVLP-------NEISEVILG 90
           DVVIV+A R+ IG  F G+  ++    L    + E + R    P       N I EV  G
Sbjct: 11  DVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGR---FPEPLRADLNLIEEVACG 67
Query: 91  QALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVT 132
             L  G G    R A + + IP   P   +N  C SGL +V 
Sbjct: 68  NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVN 109

>pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa Thiolase Of Saccharomyces Cerevisiae: A Five Layered A-B-A- B-A Structure, Constructed From Two Core Domains Of Identical Topology Length = 390

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 39  DVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRANVLP-------NEISEVILG 90
           DVVIV+A R+ IG  F G+  ++    L    + E + R    P       N I EV  G
Sbjct: 8   DVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGR---FPEPLRADLNLIEEVACG 64
Query: 91  QALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVT 132
             L  G G    R A + + IP   P   +N  C SGL +V 
Sbjct: 65  NVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVN 106

>pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From Mycobacterium Avium Length = 407

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 38  NDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKRANVLPNE-ISEVILGQALTA 95
            +  I  A RTP G    GSL+E+K  +L    + E+ +R   L    IS++ILG     
Sbjct: 7   EEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPV 66
Query: 96  G-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQV 139
           G QG + AR A + A +P       +N  C SGL++V  T+ Q+V
Sbjct: 67  GDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAVN-TAAQKV 110

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	2e-57
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	5e-56
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	1e-55
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	2e-55
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	2e-54
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	3e-53
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	6e-47
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	2e-44
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	2e-42
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	6e-39
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	1e-38
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	5e-35
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	3e-23

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Length = 397

 Score =  183 bits (466), Expect = 2e-57
 Identities = 62/101 (61%), Positives = 71/101 (70%)

Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
           M    + VVIVSAART IGSF G+L+ +   DLGST IKEVLKRA V P ++SEVI G  
Sbjct: 1   MNAGSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHV 60

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           L AG GQNP RQAS+ A IP  VPA    M+CGSGLK+V L
Sbjct: 61  LAAGCGQNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCL 101

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Length = 392

 Score =  179 bits (456), Expect = 5e-56
 Identities = 55/98 (56%), Positives = 71/98 (72%)

Query: 36  SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95
           S   +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L A
Sbjct: 1   STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPA 60

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           G+GQNPARQA++KA +P E  A  +N LCGSGL++V L
Sbjct: 61  GEGQNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVAL 98

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Length = 395

 Score =  178 bits (455), Expect = 1e-55
 Identities = 55/96 (57%), Positives = 63/96 (65%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
            DVVIVSA RTPIGSF G      A  LG+ A+KE + R  +  +EI EVI+G  L  G 
Sbjct: 5   KDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGL 64

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           GQN ARQ +I A IPN VP+  VN LCGSGLKSV L
Sbjct: 65  GQNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQL 100

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Length = 396

 Score =  178 bits (453), Expect = 2e-55
 Identities = 53/101 (52%), Positives = 72/101 (71%)

Query: 33  MVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQA 92
            V++  +VVI SAART +GSF G+   + A +LG TA KE +KRAN+ P+ I E +LG  
Sbjct: 2   GVMNMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGV 61

Query: 93  LTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           LTAG GQN ARQ ++ A IP E PA  +N++CGSGL+SV++
Sbjct: 62  LTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSM 102

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Length = 395

 Score =  175 bits (446), Expect = 2e-54
 Identities = 46/105 (43%), Positives = 67/105 (63%), Gaps = 4/105 (3%)

Query: 29  TRSTMVLSDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVI 88
           ++ T+     +VVIVSA RTPIGSFLGSLS L A  LGS AI+  +++A +   E+ E  
Sbjct: 3   SKPTL----KEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAY 58

Query: 89  LGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           +G  L  G+GQ P RQA + A +P   P + +N +C SG+K++ +
Sbjct: 59  MGNVLQGGEGQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMM 103

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Length = 394

 Score =  172 bits (438), Expect = 3e-53
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ 97
           ++VVI +A R+PIG+F G+L  +   +L    ++E +KR  V P+E+ EVILG  +    
Sbjct: 5   HNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTD 64

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLL 141
             N AR A++ A  P+ V    +   C SG++++   +  Q+ L
Sbjct: 65  EANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAA-MQIQL 107

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 401

 Score =  156 bits (396), Expect = 6e-47
 Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 1/101 (0%)

Query: 38  NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG- 96
            +  IV A RTPIG   G+L+ ++  DL + A+  ++ R+ V   E+ +V  G A  AG 
Sbjct: 2   PEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGE 61

Query: 97  QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
             +N AR A + A  P EV    VN LCGSGL++V   +R 
Sbjct: 62  DNRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARA 102

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Length = 393

 Score =  149 bits (379), Expect = 2e-44
 Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 31  STMVLSDNDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKR----ANVLPNEIS 85
           S +     DVVIV+A R+ IG  F G+  ++    L    + E + R         N I 
Sbjct: 3   SLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIE 62

Query: 86  EVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTL 133
           EV  G  L  G G    R A + + IP   P   +N  C SGL +V  
Sbjct: 63  EVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVND 110

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Length = 418

 Score =  144 bits (366), Expect = 2e-42
 Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 36  SDNDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
           S  DVV+V   RT I  +  G   +    +L S  +  VLK  N+ P ++ ++ +G  L 
Sbjct: 28  SAADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQ 87

Query: 95  AGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
            G G   AR A   ++IP  VP S VN  C SGL++V   +  
Sbjct: 88  PGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGG 130

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Length = 442

 Score =  135 bits (343), Expect = 6e-39
 Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 2/104 (1%)

Query: 36  SDNDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALT 94
             +DVVIV+A RTP+  S  G+  +    DL +  ++ ++++ N+ P+E+ ++++G  L 
Sbjct: 28  YGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLA 87

Query: 95  AG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
            G Q  +  R A+  A  P  V    VN  C SGL++V   +  
Sbjct: 88  PGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAA 131

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Length = 390

 Score =  134 bits (339), Expect = 1e-38
 Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 35  LSDNDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQA 92
           L+  DVVIV   RTP+G    G     +A D+ +  I +VL+R + V P E+ +VI G  
Sbjct: 2   LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCV 61

Query: 93  LTAG-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
                QG N AR AS+   IP+   A  V+ LCGS + ++   ++ 
Sbjct: 62  NQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQA 107

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Length = 387

 Score =  124 bits (314), Expect = 5e-35
 Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 38  NDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTA 95
             VVIV A RTP+G S  G+   ++A DL +  ++ +L R  ++    + ++  G     
Sbjct: 2   EQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQT 61

Query: 96  G-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
             QG N AR A++ A IP+ VPA  VN LCGS ++++   +R 
Sbjct: 62  LEQGFNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARM 104

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Length = 407

 Score = 93.4 bits (233), Expect = 3e-23
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 38  NDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRANVL-PNEISEVILGQALTA 95
            +  I  A RTP G    GSL+E+K  +L    + E+ +R   L    IS++ILG     
Sbjct: 7   EEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPV 66

Query: 96  G-QGQNPARQASIKANIPNEVPASLVNMLCGSGLKSV 131
           G QG + AR A + A +P       +N  C SGL++V
Sbjct: 67  GDQGGDIARTAVLAAGLPETTGGVQLNRFCASGLEAV 103

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.94
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.94
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.94
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.94
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.93
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.93
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.92
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.92
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.92
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.92
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.91
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.91
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.91
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.86
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.81
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.8
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	99.79
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.78
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.78
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	99.77
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.77
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.76
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.75
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	99.74
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.73
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	99.72
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.72
3v7i_A	413	Putative polyketide synthase; type III polyketide	99.71
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.71
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.71
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.7
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.68
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.68
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.68
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.67
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.67
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.66
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.66
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.66
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.65
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.65
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.65
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.64
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	99.64
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	99.63
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	99.62
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.61
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	99.61
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	99.61
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	99.59
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.59
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	99.57
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	99.57
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	99.54
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	99.53
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	99.52
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	99.52
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	99.48
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	99.48
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.46
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	99.43
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	99.39
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	99.39
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	99.38
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	99.35
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	99.34
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	99.34
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	99.33
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	99.33
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	99.32
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	99.28
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	99.23
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	99.23
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	99.2
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	99.18
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.93
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.63
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.62
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.59
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.38
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	88.75
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	87.42
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	86.51
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	86.33
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	85.68
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	85.63
2gel_A	231	Putative GRAM negative resuscitation promoting FA;	85.44
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	85.44
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	85.0
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	84.69
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	84.11
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	83.66
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	83.1
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	82.24
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	82.17
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	82.16
3r6m_A	213	YEAZ, resuscitation promoting factor; actin/HSP70	82.06
1xho_A	148	Chorismate mutase; southeast collaboratory for str	80.51
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	80.13

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.94  E-value=1.5e-26  Score=198.15  Aligned_cols=121  Identities=46%  Similarity=0.642  Sum_probs=116.0

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      +|++|||+|++||||+++++.++++++.||+.+|++++|+++|++|++||.+++|++.+.+.++++++.++..+|+|..+
T Consensus         3 ~m~~v~Ivg~~rT~~g~~~~~~~~~~~~~L~~~a~~~Al~~agi~~~~Id~v~~g~~~~~~~~~~~a~~~~~~lGl~~~~   82 (395)
T 4e1l_A            3 AMKDVVIVSAVRTPIGSFGGVFKNTSAVQLGTIAVKEAISRVGLNLSEIDEVIIGNVLQTGLGQNVARQIAINAGIPNSV   82 (395)
T ss_dssp             CCCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECCCCSSTTCCHHHHHHHHTTCCTTS
T ss_pred             CCCeEEEEECccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcchHHHHHHHHcCCCCCc
Confidence            37899999999999999999999999999999999999999999999999999999988777789999999999998789


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|+++|+|+++|++.|++.|++|..++++++|+|+||.
T Consensus        83 p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~  123 (395)
T 4e1l_A           83 PSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQ  123 (395)
T ss_dssp             CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred             eEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccC
Confidence            99999999999999999999999999999999999999986

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.94  E-value=1.5e-26  Score=198.03  Aligned_cols=122  Identities=30%  Similarity=0.434  Sum_probs=115.7

Q ss_pred             CCceEEEeeeeccccccC-ccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPN  113 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~-g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~  113 (160)
                      |++|||+|++||||+++. |.+++.++.+|+.+|++++|+++ |++|++||.+++|++.+++. ++++++.++..+|+|.
T Consensus         1 m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~L~~~a~~~Al~~a~gi~~~~Id~v~~g~~~~~~~~~~~~a~~~~~~~Gl~~   80 (387)
T 3goa_A            1 MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPSLTAATLDDIYWGCVQQTLEQGFNIARNAALLAEIPH   80 (387)
T ss_dssp             CCCEEEEEEEECCCEETTTCTTTTSCHHHHHHHHHHHHHHHCTTSCGGGCCEEEEECSCCSBTTTTTHHHHHHHHTTCCT
T ss_pred             CCcEEEEEcccCCceeCCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHcCEEEEEcccCCcccccHHHHHHHHHcCCCC
Confidence            678999999999999987 99999999999999999999999 99999999999999988764 7889999999999987


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      .+|+++|+++|+|+++|+++|++.|++|..++++++|+|+||...
T Consensus        81 ~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~  125 (387)
T 3goa_A           81 SVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVP  125 (387)
T ss_dssp             TSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSC
T ss_pred             CCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCc
Confidence            899999999999999999999999999999999999999999753

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.94  E-value=2.8e-26  Score=196.74  Aligned_cols=122  Identities=45%  Similarity=0.651  Sum_probs=116.1

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      +|++|||+|++||||+++++.++++++.+|+.+|++++|+++|++|++||.+++|++.+++.++++++.++..+|+|..+
T Consensus         5 ~m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~AL~~agl~~~dId~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~   84 (396)
T 4dd5_A            5 NMREVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEK   84 (396)
T ss_dssp             -CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS
T ss_pred             cCCcEEEEEcccCCeeecCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCCCCCchHHHHHHHHcCCCCCc
Confidence            47899999999999999999999999999999999999999999999999999999988777789999999999998789


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|+++|+|+++|++.|++.|++|..+.++++|+|+||..
T Consensus        85 p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~  126 (396)
T 4dd5_A           85 PAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMS  126 (396)
T ss_dssp             CEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTC
T ss_pred             eEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCC
Confidence            999999999999999999999999999999999999999973

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.94  E-value=2.7e-26  Score=196.64  Aligned_cols=121  Identities=30%  Similarity=0.499  Sum_probs=115.8

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||+++++.++++++.||+.+|++++|+++|++|++||.+++|++.+.+.++++++.++..+|+|..+|
T Consensus         4 m~~v~Ivg~~rT~~~~~~~~~~~~~~~~L~~~A~~~Al~~agl~~~~Id~v~~g~~~~~~~~~~~a~~i~~~lGl~~~~p   83 (394)
T 3ss6_A            4 MHNVVITAAVRSPIGTFGGALKNVTPVELAVPVLQEAVKRGGVEPHEVDEVILGHCIQRTDEANTARTAALAAGFPDTVT   83 (394)
T ss_dssp             CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCCGGGCSHHHHHHHHTTCCTTCE
T ss_pred             CceEEEEEcccCCccccCCCCCCCCHHHHHHHHHHHHHHHcCCCHhHCCEEEEEEccCCCccchHHHHHHHHcCCCCCce
Confidence            78999999999999999999999999999999999999999999999999999999887667889999999999987899


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++|+++|+|+++|++.|++.|++|.+++++++|+|+||..
T Consensus        84 ~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~  124 (394)
T 3ss6_A           84 GYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSS  124 (394)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTC
T ss_pred             EEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCC
Confidence            99999999999999999999999999999999999999964

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.93  E-value=5.7e-26  Score=195.01  Aligned_cols=127  Identities=27%  Similarity=0.308  Sum_probs=118.5

Q ss_pred             ccccccCCCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcC----CCccccCceEEEeeecCCCCCChHHH
Q psy4156          30 RSTMVLSDNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRAN----VLPNEISEVILGQALTAGQGQNPARQ  104 (160)
Q Consensus        30 ~~~~~~~m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~ag----I~~~~ID~vi~G~~~~~~~g~~~ar~  104 (160)
                      |++|.+.|++|||+|++||||+++ +|.++++++.+|+.+|++++|+++|    +++++||.+++|+..++..++++++.
T Consensus         2 ~~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~Al~~Ag~~~~l~~~~id~v~~g~~~~~~~~~~~a~~   81 (393)
T 1afw_A            2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA   81 (393)
T ss_dssp             TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred             cchhhhcCCCEEEEEcCcCCceeCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHCCEEEEEecCCCCCCChHHHH
Confidence            568888899999999999999998 5999999999999999999999999    99999999999998776555678999


Q ss_pred             HHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         105 ASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       105 ~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++..+|+|...|+++|+++|+||++|+..|++.|++|..+++|++|+|+|+.
T Consensus        82 va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~  133 (393)
T 1afw_A           82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTN  133 (393)
T ss_dssp             HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHH
T ss_pred             HHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCC
Confidence            9999999767999999999999999999999999999999999999999974

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.93  E-value=5.2e-26  Score=196.28  Aligned_cols=120  Identities=28%  Similarity=0.374  Sum_probs=103.8

Q ss_pred             CceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCC
Q psy4156          38 NDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNE  114 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~  114 (160)
                      ++|||+|++|||||| ++|.+++.++.||+.+|++++|++ +|++|++||.+++|++.+.+ +++++++.++..+|+|..
T Consensus         7 ~~v~Ivg~~rTp~gr~~~g~l~~~~~~~L~~~A~~~AL~~~AGl~~~dId~vi~g~~~~~~~~~~~~a~~va~~lGlp~~   86 (407)
T 3svk_A            7 EEAFIYEAIRTPRGKQKNGSLTEVKPLNLVVGLVDELRRRYPDLDETLISDMILGVVSPVGDQGGDIARTAVLAAGLPET   86 (407)
T ss_dssp             CCEEEEEEEECCCEETTTSTTTTSCHHHHHHHHHHHHHHHSTTCCGGGEEEEEEECC--------CHHHHHHHHTTCCTT
T ss_pred             CCeEEEecccCCceecCCCCCCCCCHHHHHHHHHHHHHhhhcCcCHHHCCEEEEEecCccccccCcHHHHHHHHcCCCCC
Confidence            589999999999995 789999999999999999999999 99999999999999998765 367899999999999878


Q ss_pred             CceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         115 VPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       115 vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+++|+++|+||++|+..|++.|++|.+++++++|+|+||..
T Consensus        87 ~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~  129 (407)
T 3svk_A           87 TGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRV  129 (407)
T ss_dssp             CEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC---
T ss_pred             CceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccC
Confidence            9999999999999999999999999999999999999999963

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.92  E-value=7e-25  Score=188.19  Aligned_cols=120  Identities=33%  Similarity=0.414  Sum_probs=112.2

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCC-CCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQ-GQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GLp~~v  115 (160)
                      |++|||+|++||||++++|.++++++.+|+.+|++++|+++|++|++||.+++|+..++.. ++++++.++..+|+|...
T Consensus         1 m~~v~Ivg~~rT~~~~~~g~~~~~~~~~L~~~Aa~~Al~dAgl~~~~id~v~~g~~~~~~~~~~~~a~~va~~lGl~~~~   80 (401)
T 1ulq_A            1 MPEAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEV   80 (401)
T ss_dssp             --CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTC
T ss_pred             CCceEEEEcccCCccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCChHHHHHHHHhCCCCCc
Confidence            5689999999999999999999999999999999999999999999999999999887654 678999999999997679


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|+++|+||++|+..|++.|++|..+++|++|+|+|+.
T Consensus        81 p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~  121 (401)
T 1ulq_A           81 AGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR  121 (401)
T ss_dssp             EEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred             cEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCC
Confidence            99999999999999999999999999999999999999986

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.92  E-value=8.6e-25  Score=187.42  Aligned_cols=121  Identities=51%  Similarity=0.724  Sum_probs=114.5

Q ss_pred             CCCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          36 SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        36 ~m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      .|++|||+|++||||+++.|.++++++.+|+.+|++++|+++|+++++||.+++|+..+...++++++.++..+|+|...
T Consensus         4 ~~~~v~Ivg~~~tp~g~~~g~~~~~~~~~L~~~a~~~Al~dAGl~~~~id~v~~g~~~~~~~~~~~a~~ia~~lgl~~~~   83 (397)
T 1wl4_A            4 GSDPVVIVSAARTIIGSFNGALAAVPVQDLGSTVIKEVLKRATVAPEDVSEVIFGHVLAAGCGQNPVRQASVGAGIPYSV   83 (397)
T ss_dssp             CCSCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTS
T ss_pred             CCCcEEEEEcccCCceeCCCccCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHHcCCCCCc
Confidence            46789999999999999999999999999999999999999999999999999999887666678999999999997689


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|+++|+||+.|+..|++.|++|..|++|++|+|+|+.
T Consensus        84 p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~  124 (397)
T 1wl4_A           84 PAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSK  124 (397)
T ss_dssp             CEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTT
T ss_pred             cEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCC
Confidence            99999999999999999999999999999999999999985

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.92  E-value=2.1e-24  Score=184.62  Aligned_cols=120  Identities=47%  Similarity=0.683  Sum_probs=113.7

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||+++.|.+++.++.+|+.+|++++|+++|+++++||.+++|++.+.+.++++++.++..+|++...|
T Consensus         2 m~~v~Ivg~~~t~~g~~~g~~~~~~~~~L~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~ia~~lgl~~~~p   81 (392)
T 2vu1_A            2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT   81 (392)
T ss_dssp             CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred             CCCEEEEEeeecCcccCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHHcCCCCCce
Confidence            67899999999999999999999999999999999999999999999999999998876667789999999999975599


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++++|+||+.|++.|++.|++|..+++|++|+|+||.
T Consensus        82 ~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~  121 (392)
T 2vu1_A           82 AWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSM  121 (392)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred             EEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCC
Confidence            9999999999999999999999999999999999999986

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.92  E-value=7e-25  Score=191.42  Aligned_cols=127  Identities=26%  Similarity=0.394  Sum_probs=113.9

Q ss_pred             cccccCCCceEEEeeeeccccccC-ccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHH
Q psy4156          31 STMVLSDNDVVIVSAARTPIGSFL-GSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIK  108 (160)
Q Consensus        31 ~~~~~~m~~V~Ivg~~rTpfg~~~-g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~  108 (160)
                      +..+++|++|||+|++||||+++. |.++++++.+|+.+|++++|+++|+++++||.+++|+..++. .++++++.++..
T Consensus        23 ~~~~~~m~~v~Ivg~~rT~~g~~~~g~~~~~~~~~La~~Aa~~AL~dAGl~~~~Id~vi~g~~~~~~~~~~~~a~~va~~  102 (442)
T 2wu9_A           23 QRTSLYGDDVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFY  102 (442)
T ss_dssp             ---CCGGGCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECCSSBHHHHHHHHHHHHHH
T ss_pred             CcchhcCCCeEEEEcCcCCeeecCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCccCCCChHHHHHHHH
Confidence            334456788999999999999986 999999999999999999999999999999999999987643 245689999999


Q ss_pred             cCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         109 ANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       109 ~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +|+|...|+++|+++|+||++|+..|++.|++|..+++|++|+|+|+..
T Consensus       103 lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~  151 (442)
T 2wu9_A          103 AGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTN  151 (442)
T ss_dssp             TTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTS
T ss_pred             cCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCC
Confidence            9997679999999999999999999999999999999999999999863

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.91  E-value=4e-24  Score=182.80  Aligned_cols=120  Identities=39%  Similarity=0.629  Sum_probs=114.0

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      |++|||+|++||||++++|.++++++.+|+.+|++++|+++|+++++||.+++|+..+.+.+++.++.++..+|+|...|
T Consensus         7 ~~~v~Ivg~~rTp~g~~~g~~~~~~~~~l~~~a~~~Al~dAgl~~~~id~~~~g~~~~~~~~~~~a~~va~~lgl~~~~p   86 (395)
T 2ib8_A            7 LKEVVIVSATRTPIGSFLGSLSLLPATKLGSIAIQGAIEKAGIPKEEVKEAYMGNVLQGGEGQAPTRQAVLGAGLPISTP   86 (395)
T ss_dssp             CCCEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTCC
T ss_pred             CCCeEEEecccccccccCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCchHHHHHHHHcCCCCCce
Confidence            67899999999999999999999999999999999999999999999999999999877667889999999999976799


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++|+++|+||++|+..|++.|++|..+++|++|+|+|+.
T Consensus        87 ~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~  126 (395)
T 2ib8_A           87 CTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSN  126 (395)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred             EEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccC
Confidence            9999999999999999999999999999999999999985

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.91  E-value=3.9e-24  Score=182.95  Aligned_cols=122  Identities=32%  Similarity=0.429  Sum_probs=113.9

Q ss_pred             cCCCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHc-CCCccccCceEEEeeecCCC-CCChHHHHHHHcCC
Q psy4156          35 LSDNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRA-NVLPNEISEVILGQALTAGQ-GQNPARQASIKANI  111 (160)
Q Consensus        35 ~~m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~a-gI~~~~ID~vi~G~~~~~~~-g~~~ar~~al~~GL  111 (160)
                      ++|++|||+|++||||+++ +|.+++.++.+|+.+|++++|+++ |+++++||.+++|+..+++. ++++++.++..+|+
T Consensus         2 ~~m~~v~Ivg~~~t~~g~~~~g~~~~~~~~~L~~~a~~~AL~dA~gl~~~~id~v~~g~~~~~~~~~~~~a~~ia~~lgl   81 (390)
T 1wdk_C            2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI   81 (390)
T ss_dssp             CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred             CCCCcEEEEEcccCCceecCCCccCCCCHHHHHHHHHHHHHHhccCCCHHHCCEEEEEeeccccCCCCcHHHHHHHHcCC
Confidence            3578899999999999998 699999999999999999999999 99999999999999877653 47799999999999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |...|+++++++|+|++.|++.|++.|++|..+++|++|+|+|+.
T Consensus        82 ~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~  126 (390)
T 1wdk_C           82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGH  126 (390)
T ss_dssp             CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred             CCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeecccc
Confidence            778999999999999999999999999999999999999999975

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.91  E-value=3.4e-24  Score=185.38  Aligned_cols=121  Identities=28%  Similarity=0.376  Sum_probs=112.2

Q ss_pred             CCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          37 DNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      |+++||+|++||||+++ ++.++++++.+|+.+|++++|+++|+++++||.+++|+..++..+++.++.++..+|+|...
T Consensus        29 ~~~v~Ivg~~rt~~g~~~~~~~~~~~~~~L~~~Aa~~AL~dAgl~~~~id~v~~g~~~~~~~~~~~a~~~a~~lGl~~~~  108 (418)
T 2iik_A           29 AADVVVVHGRRTAICRAGRGGFKDTTPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETV  108 (418)
T ss_dssp             TTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCCEEEECSSSBGGGHHHHHHHHHHTTCCTTS
T ss_pred             CCCeEEEeeeecCceecCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCccccccHHHHHHHHcCCCCCc
Confidence            67899999999999985 57889999999999999999999999999999999999877655567899999999997689


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+++|+++|+||++|+..|++.|++|.++++|++|+|+|+..
T Consensus       109 p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~  150 (418)
T 2iik_A          109 PLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLA  150 (418)
T ss_dssp             CEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTC
T ss_pred             eEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccC
Confidence            999999999999999999999999999999999999999863

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.86  E-value=1.5e-21  Score=173.51  Aligned_cols=120  Identities=14%  Similarity=-0.026  Sum_probs=99.5

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC------------CCCChHHH
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG------------QGQNPARQ  104 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~------------~g~~~ar~  104 (160)
                      .+..+|||++||||++..+.+++.++.||+.+|++++|+|+||+|++||.+|.|++....            ...++++.
T Consensus        17 PRtPVIVGvG~t~~r~~~g~~~~~s~~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~~~~~~~~~~~~~~g~~~~~~~~   96 (520)
T 4egv_A           17 PRTPVIVGVGQFTERIDLDGYRGMSSVELATEAAKAALHDCGADADTVARAIDTVAGTRQFEISGPASAPLGVSSNYPRS   96 (520)
T ss_dssp             TTCEEEEEEEEEEC--------CCCHHHHHHHHHHHHHHHTSSCHHHHHHHCCEEEECCC--------------CCHHHH
T ss_pred             CCCeEEEEeeeccccCCCCCCCCCCHHHHHHHHHHHHHHHhCcCHHHcceEEEEEeecccccccchhhhhhccccCHHHH
Confidence            356779999999999888889999999999999999999999999999999988874321            23467889


Q ss_pred             HHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         105 ASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       105 ~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++..+|++ ..|.++++++|+|++++++.|++.|++|.+|++|++|+|+||..
T Consensus        97 va~~lGl~-~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~  148 (520)
T 4egv_A           97 VARNIGAD-PAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTL  148 (520)
T ss_dssp             HHHHHTCC-CSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC--
T ss_pred             HHHHcCCC-CceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecccc
Confidence            99999998 79999999999999999999999999999999999999999864

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.81  E-value=1.4e-19  Score=151.32  Aligned_cols=117  Identities=19%  Similarity=0.043  Sum_probs=107.5

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.||.  .||++++++.+.+++++.+|+.+|++++|+++|++|++||.+++++..++...+..++.++..+|+|..+|++
T Consensus        44 ~~~i~--~rtgi~~r~~~~~~~~~~~la~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lgl~~~~~~~  121 (333)
T 4dfe_A           44 DEWIV--ARTGIHARYFAEPDVTTSDLAFIASQRAIEAADIDPQSIDLIIVATSTPDFVFPSTACLLQNKLGIRNHGAAF  121 (333)
T ss_dssp             HHHHH--HHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHTTCCSCCEEE
T ss_pred             HHHhH--HhcCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHhCCCCCCcEE
Confidence            45565  6899998888888999999999999999999999999999999999987666678899999999997689999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++++|+|+++|+..|+++|++|..+.++++|+|+||..
T Consensus       122 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~  160 (333)
T 4dfe_A          122 DVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRI  160 (333)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG
T ss_pred             EeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccccc
Confidence            999999999999999999999999999999999999863

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=99.80  E-value=3.8e-19  Score=148.82  Aligned_cols=116  Identities=15%  Similarity=0.062  Sum_probs=106.4

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.||.  .||++.+++.+.+++++.+|+.+|++++|+++|++|++||.+++++..++...|..++.++..+|++ ++|++
T Consensus        37 ~~~i~--~~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~  113 (323)
T 3il3_A           37 DEWIV--TRSGIRERRIAAEDETVATMGFEAAKNAIEAAQINPQDIELIIVATTSHSHAYPSAACQVQGLLNID-DAISF  113 (323)
T ss_dssp             HHHHH--HHTCCCEEECCCTTCCHHHHHHHHHHHHHHHHCCCGGGCCEEEEECSCCSCSSSCHHHHHHHHTTCS-SCEEE
T ss_pred             HHHHH--HhcCCcEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCccHHHHHHHHhCCC-CccEE
Confidence            45565  5899988887778899999999999999999999999999999999988766678899999999997 79999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++++|+||++|+..|+++|++|..+.++++|+|+||..
T Consensus       114 ~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~  152 (323)
T 3il3_A          114 DLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRK  152 (323)
T ss_dssp             EECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGS
T ss_pred             EECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccccc
Confidence            999999999999999999999999999999999999863

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=99.79  E-value=7.4e-19  Score=148.62  Aligned_cols=115  Identities=13%  Similarity=0.003  Sum_probs=105.2

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .||.+.+++.+.+++++.+|+.+|++++|+++|++|++||.+++++..++...|..++.++..+|+|.++|+++
T Consensus        46 ~~i~--~~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~agi~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~  123 (354)
T 4efi_A           46 RDVV--KMIGVNRRRWADAQTSAGDLCRKAGEKLLAGLGWQADSIDALIFVSQTPNYRLPATAFVLQAELDLPASCLALD  123 (354)
T ss_dssp             HHHH--HHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCCTTSEEEE
T ss_pred             HHHH--HhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCcCCCccEEe
Confidence            3454  47888877777788999999999999999999999999999999998887667889999999999976899999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++++|+||++|+..|+++|++|..+.++++|+|+||.
T Consensus       124 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~  160 (354)
T 4efi_A          124 INLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISK  160 (354)
T ss_dssp             ECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred             eCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcc
Confidence            9999999999999999999999999999999999986

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.78  E-value=1.2e-18  Score=148.04  Aligned_cols=116  Identities=17%  Similarity=0.059  Sum_probs=104.7

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .||.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++..++...|..++.++..+|++.++|+++
T Consensus        60 ~~i~--~~tGI~~R~~a~~~~~~~~La~~Aa~~aL~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~  137 (365)
T 3gwa_A           60 EKIL--AKTGIRERRIAAPRETAADLAYEAARKLFAQGAVGADQVDFVILCTQAPDYVLPTSACMLQHRLGIPTHAGALD  137 (365)
T ss_dssp             HHHH--HHHCCCEEEECCTTCCHHHHHHHHHHHHHHTTSCCGGGCCEEEEEESSCSCSBSCHHHHHHHHTTCCTTSEEEE
T ss_pred             HHHH--HhcCccEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCCCCceEEE
Confidence            4444  46777777666678999999999999999999999999999999998876666788999999999987899999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++++|+||++|+..|+++|++|.++.++++|+|+||..
T Consensus       138 v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~  175 (365)
T 3gwa_A          138 VNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKY  175 (365)
T ss_dssp             EECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGG
T ss_pred             ecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhcc
Confidence            99999999999999999999999999999999999963

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.78  E-value=1.1e-18  Score=143.47  Aligned_cols=115  Identities=15%  Similarity=0.036  Sum_probs=104.3

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.+|.  .||++.+++...++.++.+|+.+|++++|+++|++|++||.+++|+..++...++.++.++..+|++ ..|++
T Consensus        30 ~~~i~--~~~gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~  106 (313)
T 1zow_A           30 DEWIS--KMTGIKERHWADDDQDTSDLAYEASVKAIADAGIQPEDIDMIIVATATGDMPFPTVANMLQERLGTG-KVASM  106 (313)
T ss_dssp             HHHHH--HHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHHTCC-SCCEE
T ss_pred             HHHHH--HhhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEE
Confidence            34454  5899998888888999999999999999999999999999999999877655567899999999997 58999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++|+|+++|+..|++.|++|..+.++++|+|+|+.
T Consensus       107 ~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~  144 (313)
T 1zow_A          107 DQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSK  144 (313)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGG
T ss_pred             EECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence            99999999999999999999999999999999999985

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=99.77  E-value=1.3e-18  Score=147.79  Aligned_cols=116  Identities=14%  Similarity=0.104  Sum_probs=105.6

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.||.  .||++.+++.+.+++++.+|+.+|++++|+++|++|++||.+++++..++...+..++.++..+|++ ++|++
T Consensus        53 ~~~i~--~~tGi~~R~~a~~~~~~~~La~~Aa~~aL~~agl~~~dId~vi~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~  129 (359)
T 3h78_A           53 DEFIV--ERTGVRTRYHVEPEQAVSALMVPAARQAIEAAGLLPEDIDLLLVNTLSPDHHDPSQACLIQPLLGLR-HIPVL  129 (359)
T ss_dssp             HHHHH--HHHCCCEEEECCTTCCTHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSCSSSBSCHHHHHHHHHTCC-SCCEE
T ss_pred             HHHHH--HhcCceEEEEcCCCCCHHHHHHHHHHHHHHhcCCCHHHCCEEEEEeCCCCCCCCcHHHHHHHHcCCC-CCcEE
Confidence            44555  5888888777778899999999999999999999999999999999887665678899999999997 79999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++++|+|+++|+..|+++|++|..+.++++|+|+||.-
T Consensus       130 ~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~  168 (359)
T 3h78_A          130 DIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKR  168 (359)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGG
T ss_pred             EECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhccc
Confidence            999999999999999999999999999999999999863

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.77  E-value=1.6e-18  Score=145.71  Aligned_cols=115  Identities=13%  Similarity=-0.008  Sum_probs=103.6

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .||.+.+++-+.+++++.+|+.+|++++|+++|++|++||.+++++..+++..+..++.++..+|++..+|+++
T Consensus        48 ~~i~--~~tGi~~R~~~~~~~~~~~La~~Aa~~al~~ag~~~~~Id~vi~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~  125 (345)
T 3s21_A           48 DVLG--DVAGIHARRLWDQDVQASDAATQAARKALIDANIGIEKIGLLINTSVSRDYLEPSTASIVSGNLGVSDHCMTFD  125 (345)
T ss_dssp             CHHH--HTTCCSEEEECSSCCCHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCCSCSSSCHHHHHHHHHTCCTTCEEEE
T ss_pred             HHHH--HhhCceeEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCChHHHHHHHHhCCCCCceEEe
Confidence            4454  47777777666678999999999999999999999999999999998877666788999999999986799999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++++|+||++|+..|+++|++|..+.++++|+|+||.
T Consensus       126 v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~  162 (345)
T 3s21_A          126 VANACLAFINGMDIAARMLERGEIDYALVVDGETANL  162 (345)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHH
T ss_pred             ECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccch
Confidence            9999999999999999999999999999999999974

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.76  E-value=4.1e-18  Score=142.22  Aligned_cols=114  Identities=14%  Similarity=0.021  Sum_probs=102.5

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.||.  .||.+.+++-+..++ +.+|+.+|++++|+++|++|++||.+++++..++...|..++.++..+|++ ++|++
T Consensus        32 ~~~i~--~~~Gi~~R~~a~~~e-~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~-~~~~~  107 (321)
T 3il6_A           32 AAWIH--SRTGISERRIVTQEN-TSDLCHQVAKQLLEKSGKQASEIDFILVATVTPDFNMPSVACQVQGAIGAT-EAFAF  107 (321)
T ss_dssp             HHHHH--HHHSCSEEECCSSCC-HHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCSCSSSCHHHHHHHHTTCT-TCEEE
T ss_pred             hhhhh--hhcCceEEEECCCCC-HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCcCCCcHHHHHHHHcCCC-CceEE
Confidence            45564  578888776665565 999999999999999999999999999999987766788999999999998 59999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++|+||++|+..|+++|++|..+.++++|.|+||.
T Consensus       108 ~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~  145 (321)
T 3il6_A          108 DISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSK  145 (321)
T ss_dssp             EECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGG
T ss_pred             EeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence            99999999999999999999999999999999999986

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.75  E-value=5e-18  Score=140.75  Aligned_cols=110  Identities=11%  Similarity=-0.050  Sum_probs=101.2

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .||++.+++...++.++.+|+.+|++++|+++|++|++||.+++|+..++...++.+..++..+|++ +.|+++++++|+
T Consensus        45 ~~~gi~~r~~~~~~~~~~~la~~A~~~al~~ag~~~~~id~vi~~t~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aC~  123 (335)
T 1u6e_A           45 TRTGIKTRRFAADDESAASMATEACRRALSNAGLSAADIDGVIVTTNTHFLQTPPAAPMVAASLGAK-GILGFDLSAGAA  123 (335)
T ss_dssp             HHHCCSEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCSSSCHHHHHHHHHTCT-TSEEEEEECGGG
T ss_pred             HhcCCceEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEeeeccccH
Confidence            4788887777777899999999999999999999999999999999877666678899999999996 799999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |++.|+..|+++|++|..+.++++|+|+|+.
T Consensus       124 s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~  154 (335)
T 1u6e_A          124 GFGYALGAAADMIRGGGAATMLVVGTEKLSP  154 (335)
T ss_dssp             HHHHHHHHHHHHHHHTSCSSEEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEEEEccccc
Confidence            9999999999999999999999999999984

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=99.74  E-value=1.7e-17  Score=138.96  Aligned_cols=116  Identities=17%  Similarity=0.091  Sum_probs=105.9

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa  117 (160)
                      .+.||.  .||.+.+|+.+.++++..||+.+|++++|+++|++|+|||.+++++..++...|..+..++..+|++ +.++
T Consensus        40 ~~e~I~--~rtGI~~R~~a~~~e~~~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LGl~-~~~a  116 (350)
T 4ewp_A           40 SDEWIR--QRTGIVTRQRATAEETVPVMAVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIGAT-PAPA  116 (350)
T ss_dssp             CHHHHH--HHHCCSEEECCCSSCCHHHHHHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTTCT-TSCE
T ss_pred             CHHHHH--hccCceEEEEcCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhCCC-CceE
Confidence            456776  5899888777778999999999999999999999999999999999988766788999999999997 6889


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++++++|+++++|+..|..+|++|..+-+++.+.|.+|.
T Consensus       117 ~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~  155 (350)
T 4ewp_A          117 YDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSD  155 (350)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred             EEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeecee
Confidence            999999999999999999999999888899999999985

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.73  E-value=1.8e-17  Score=136.65  Aligned_cols=110  Identities=13%  Similarity=0.065  Sum_probs=99.1

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .+|.+.+++-..++.+..+|+.+|++++|+++|++|++||.+++|+..+....+..++.++..+|++ ..|+++++++|+
T Consensus        35 ~~~Gi~~r~~~~~~~~~~~l~~~a~~~al~~ag~~~~~id~vi~g~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~aCa  113 (317)
T 1hnj_A           35 TRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAFDVAAACA  113 (317)
T ss_dssp             HHHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEEEECCGGG
T ss_pred             HHhCceEEEecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCeEEeeCcccH
Confidence            4666666655557889999999999999999999999999999999887655677899999999997 489999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |++.|+..|++.|++|..+.++++|+|+|+.
T Consensus       114 s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~  144 (317)
T 1hnj_A          114 GFTYALSVADQYVKSGAVKYALVVGSDVLAR  144 (317)
T ss_dssp             HHHHHHHHHHHHHHTTSCSEEEEEEEECHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEEechhcc
Confidence            9999999999999999999999999999874

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=99.72  E-value=2.7e-17  Score=139.42  Aligned_cols=110  Identities=15%  Similarity=0.029  Sum_probs=97.4

Q ss_pred             eeccccccCccCCCC--CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecC-CCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          46 ARTPIGSFLGSLSEL--KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA-GQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~--~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~-~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      .||++.+++.+..++  ++.+|+.+|++++|+++|++|++||.+++++...+ ...+.+++.++..+|++ .+|+++|++
T Consensus        36 ~~tGi~~r~~a~~~e~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~~~~~~d~~~~a~~v~~~lG~~-~~~~~~v~~  114 (357)
T 3s3l_A           36 KLRGIESVTVASDAEEDAPPRMAARAARAALGRGDVDPADVSLVLHSSLWFQGIDLWPAASYVAHEAVGR-HVPAFGLAQ  114 (357)
T ss_dssp             HHHCCCEEECCCSSGGGSHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSSCCSSSSSCHHHHHHHHHTCS-SSCEEEEEC
T ss_pred             HHcCceEEEecCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCcccccHHHHHHHHhCCC-CCcEEEEcC
Confidence            788888776665556  89999999999999999999999999999998421 12346789999999996 899999999


Q ss_pred             cCccHHHHHHHHHHHHHcCCCc--EEEEEeeccccc
Q psy4156         123 LCGSGLKSVTLTSRQQVLLTLH--WLGNGAQYHITA  156 (160)
Q Consensus       123 aCaSGl~Al~~Aa~~I~sG~~~--vlivgG~E~mt~  156 (160)
                      +|+||++|+..|+++|++|.++  .++++|+|+||.
T Consensus       115 aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~  150 (357)
T 3s3l_A          115 RCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAG  150 (357)
T ss_dssp             GGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCT
T ss_pred             ccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccc
Confidence            9999999999999999999988  999999999994

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.72  E-value=2.7e-17  Score=137.30  Aligned_cols=110  Identities=15%  Similarity=0.055  Sum_probs=98.8

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .||.+.+++...++.+..+|+.+|++++|+++|++|++||.+++|+..++...++.+..++..+|++ ..|+++++++|+
T Consensus        44 ~~~Gi~~R~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id~vi~gt~~~~~~~p~~a~~v~~~lgl~-~~~~~~v~~aCa  122 (339)
T 1mzj_A           44 TRTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACA  122 (339)
T ss_dssp             HHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGG
T ss_pred             HhcCceEEEEeCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCChHHHHHHHHhCCC-CccEEEccccch
Confidence            3566666655666889999999999999999999999999999999887655677899999999997 589999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |++.|+..|++.|++|..+.++++|+|+|+.
T Consensus       123 s~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~  153 (339)
T 1mzj_A          123 GFCHALSIAADAVESGGSRHVLVVATERMTD  153 (339)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEEEccccc
Confidence            9999999999999999999999999999985

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=99.71  E-value=1.1e-17  Score=145.07  Aligned_cols=113  Identities=10%  Similarity=0.024  Sum_probs=102.4

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .||.  .||+|+++++.+. .++.+|+.+|++++|+++|++|++||.++++++.+. ..|..++.++..+|++..+++++
T Consensus       118 e~i~--~rtgi~~R~~~~~-~~~~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~-~~P~~a~~v~~~LGl~~~~~~~~  193 (413)
T 3v7i_A          118 KAVP--ASQTVQERTAPAW-EAVQAYGERAARGALQIAGLDVADVDCLITSNSTTP-ALPGLDVALANRLPLRGDTMLLP  193 (413)
T ss_dssp             HTSC--CCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECCSSC-CSSCHHHHHHHHTTCCTTCEEEE
T ss_pred             ccee--cCCCHHHhCcccc-cCHHHHHHHHHHHHHHHhCcCHHHCCEEEEEccCCC-CcCHHHHHHHHHhCCCCCceEEE
Confidence            3554  6999998876665 478999999999999999999999999999998873 56789999999999986699999


Q ss_pred             E-cccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 V-NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V-~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      + +++|+||++|+..|+++|++|..+.++++|+|+||.
T Consensus       194 v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~  231 (413)
T 3v7i_A          194 ATQWACVAGTRSLALAADLVAADPDRVVLVVISEALST  231 (413)
T ss_dssp             ESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGG
T ss_pred             eeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccc
Confidence            9 999999999999999999999999999999999986

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.71  E-value=5.4e-17  Score=132.95  Aligned_cols=108  Identities=17%  Similarity=0.078  Sum_probs=95.2

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      ++.+.+++-.. +.++.+|+.+|++++|+++|++|++||.+++|+..++...++.++.++..+|++ ++|+++++++|+|
T Consensus        36 ~~Gi~~r~~~~-~~~~~~l~~~a~~~al~~ag~~~~~id~v~~~~~~~~~~~~~~a~~v~~~lgl~-~~~~~~v~~~C~s  113 (309)
T 2ebd_A           36 RTGIKERRIAK-EETITYMATQAAKEALREANLSPEELDLIILATLTPQKRFPSTACLVQAQLKAK-GVYAFDISAACSG  113 (309)
T ss_dssp             HHCCCEEEECS-SCCHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSCSSSSSCHHHHHHHHHTCT-TCEEEEEECGGGH
T ss_pred             HhCceeeeecC-CCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CceEEecCccchH
Confidence            45555443332 278999999999999999999999999999999877655677899999999997 5899999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++.|+..|++.|++|..+.++++|+|+|+.
T Consensus       114 ~~~al~~A~~~i~~g~~~~vlv~g~e~~s~  143 (309)
T 2ebd_A          114 FIYALDIADSFIKSGKAKNVLVIGAEKLSE  143 (309)
T ss_dssp             HHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred             HHHHHHHHHHHHHCCCCCEEEEEEeccccc
Confidence            999999999999999999999999999985

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.71  E-value=4.3e-17  Score=134.62  Aligned_cols=109  Identities=12%  Similarity=0.020  Sum_probs=97.9

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .||.+.+++...++.++.+|+.+|++++|+++|++|++||.+++|+..++...++.++.++..+|+  ..|+++++++|+
T Consensus        34 ~~~Gi~~r~~~~~~~~~~~la~~a~~~al~~ag~~~~~id~vi~~~~~~~~~~~~~a~~v~~~lgl--~~~~~~v~~aCa  111 (322)
T 1ub7_A           34 TRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYDLLAGCP  111 (322)
T ss_dssp             HHTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEEEECSTT
T ss_pred             HhcCceEEeecCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCC--CCEEEeeCccch
Confidence            467776666566788999999999999999999999999999999987654456789999999999  589999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |++.|+..|++.|++|..+.++++|+|+|+.
T Consensus       112 s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~  142 (322)
T 1ub7_A          112 GWIYALAQAHALVEAGLAQKVLAVGAEALSK  142 (322)
T ss_dssp             HHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEEEechhcc
Confidence            9999999999999999999999999999985

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.70  E-value=4.1e-17  Score=140.26  Aligned_cols=114  Identities=11%  Similarity=-0.064  Sum_probs=100.3

Q ss_pred             ceEEEeeeeccccccCccCCC--------------------CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC
Q psy4156          39 DVVIVSAARTPIGSFLGSLSE--------------------LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG   98 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~--------------------~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g   98 (160)
                      +.||.  .||.+.+|+.+.++                    .++.+|+.+|++++|+++|++|++||.+++++..++...
T Consensus        76 ~e~I~--~~tGI~~R~~a~~~~~~~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~AL~~agi~~~dId~vi~~t~t~~~~~  153 (392)
T 3led_A           76 SEFIE--KASGIKSRYVVAKPGIVDPDVMRPIIPERSNDELSILAEMAVTAAEQAIERWGKPRERIGAVLCACSNMQRAY  153 (392)
T ss_dssp             HHHHH--HHHCCCEEEESCCGGGGCTTTCSCCCCCCCTTSCCHHHHHHHHHHHHHHHHHCSCGGGEEEEEEESSCCSCSB
T ss_pred             HHHHH--HccCCceEEEecCcccccccccccccccchhcccccHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCc
Confidence            56676  58888766554432                    136899999999999999999999999999999887667


Q ss_pred             CChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156          99 QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus        99 ~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |..+..++..+|++  .|+++++++|+||++|+..|+++|++|.++.++++|+|+||.
T Consensus       154 p~~a~~v~~~LGl~--~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~  209 (392)
T 3led_A          154 PAMAIEVQNALGLG--GFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSG  209 (392)
T ss_dssp             SCHHHHHHHHTTCC--SEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGG
T ss_pred             cHHHHHHHHHhCCC--CeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCC
Confidence            78899999999994  899999999999999999999999999999999999999986

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.68  E-value=1.9e-16  Score=133.66  Aligned_cols=96  Identities=14%  Similarity=-0.005  Sum_probs=88.1

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc-ccCccHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN-MLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~-~aCaSGl~Al~~Aa~~I  138 (160)
                      .+..+|+.+|++++|+++|++|++||.+++++..+ ...+..+..++..+|++..+|+++++ ++|+||+.|+..|+++|
T Consensus        93 ~~~~~la~~Aa~~al~~ag~~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i  171 (374)
T 2h84_A           93 KVVPDLAQQACLRALKDWGGDKGDITHIVSVTSTG-IIIPDVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLA  171 (374)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCCCcHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHH
Confidence            66889999999999999999999999999998875 34567889999999998558999997 89999999999999999


Q ss_pred             HcCCCcEEEEEeeccccc
Q psy4156         139 VLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~  156 (160)
                      ++|..+.++++|+|+||.
T Consensus       172 ~~g~~~~vLv~g~e~~s~  189 (374)
T 2h84_A          172 KASPRNRILVVCTEVCSL  189 (374)
T ss_dssp             TTCTTCEEEEEEEECCGG
T ss_pred             HcCCCCEEEEEEEEecch
Confidence            999999999999999985

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.67  E-value=1.7e-16  Score=135.32  Aligned_cols=96  Identities=13%  Similarity=0.002  Sum_probs=87.9

Q ss_pred             CCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHH
Q psy4156          60 LKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        60 ~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I  138 (160)
                      .++.+|+.+|++++|+++|++|++||.+++++..+ ...+..++.++..+|++..++ +++++++|+|+++|+..|+++|
T Consensus        96 ~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i  174 (387)
T 3a5r_A           96 KGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAG-VDMPGADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIA  174 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSC-CEESCHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHH
Confidence            47799999999999999999999999999998875 345678999999999985575 9999999999999999999999


Q ss_pred             HcCCCcEEEEEeeccccc
Q psy4156         139 VLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~  156 (160)
                      ++|.++.++++|.|+||.
T Consensus       175 ~~g~~~~vLvvg~e~~s~  192 (387)
T 3a5r_A          175 ENNKGARVLIVCSEMTTT  192 (387)
T ss_dssp             HHSTTCEEEEEEEECCTT
T ss_pred             HhCCCCEEEEEEEeccch
Confidence            999999999999999986

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.66  E-value=2.2e-16  Score=135.58  Aligned_cols=95  Identities=11%  Similarity=0.002  Sum_probs=87.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ++.+|+.+|++++|+++|++|++||.+++++..+ ...|..+..++..+|++..++ +++++++|+||++|+..|+++|+
T Consensus       101 ~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~  179 (393)
T 3ov2_A          101 EIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISG-IDMPGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAE  179 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CCBSCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CCCCCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999987 556789999999999985554 89999999999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      +|..+.++++|.|+||.
T Consensus       180 sg~~~~vLvvg~E~~s~  196 (393)
T 3ov2_A          180 NNRGARVLVVACEITVL  196 (393)
T ss_dssp             HSTTCEEEEEEEECGGG
T ss_pred             cCCCCEEEEEEEeccch
Confidence            99999999999999973

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.66  E-value=2e-16  Score=135.56  Aligned_cols=94  Identities=11%  Similarity=-0.025  Sum_probs=87.2

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ++.+|+.+|++++|+++|++|++||.+++++..+ ...|..+..++..+|++..++ +++++++|+||++|+..|+.+|+
T Consensus        95 ~~~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~-~~~p~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~  173 (387)
T 3oit_A           95 AVPELAAEAAKKAIAEWGRPAADITHLVVTTNSG-AHVPGVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAE  173 (387)
T ss_dssp             HHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSC-CEESCHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCC-CCcccHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHh
Confidence            5789999999999999999999999999999877 456788999999999985554 89999999999999999999999


Q ss_pred             cCCCcEEEEEeecccc
Q psy4156         140 LLTLHWLGNGAQYHIT  155 (160)
Q Consensus       140 sG~~~vlivgG~E~mt  155 (160)
                      +|..+.++++|.|+||
T Consensus       174 sg~~~~vLvvg~E~~s  189 (387)
T 3oit_A          174 NSRGARVLVVAAELTL  189 (387)
T ss_dssp             SSTTCEEEEEEEECGG
T ss_pred             cCCCCEEEEEEEeccc
Confidence            9999999999999998

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.65  E-value=2.5e-16  Score=135.79  Aligned_cols=95  Identities=8%  Similarity=-0.012  Sum_probs=87.3

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc-eEEEcccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP-ASLVNMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP-a~~V~~aCaSGl~Al~~Aa~~I~  139 (160)
                      ++.+|+.+|++++|+++|++|++||.+++++..+ ...+..++.++..+|++..+| +++++++|+||++|+..|+++|+
T Consensus       124 ~~~~La~~Aa~~AL~~agl~~~~Id~li~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~  202 (413)
T 1xes_A          124 EVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTT-PDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAE  202 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESCC-CEESCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccchHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHH
Confidence            6789999999999999999999999999999876 345678899999999985575 99999999999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      +|.++.++++|+|+||.
T Consensus       203 ~G~~~~vLvvg~E~~s~  219 (413)
T 1xes_A          203 NNRGARVLVICSETTAV  219 (413)
T ss_dssp             TSTTCCEEEEEEECTTT
T ss_pred             cCCCCEEEEEEehhhhh
Confidence            99999999999999986

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.65  E-value=2.8e-16  Score=134.05  Aligned_cols=97  Identities=10%  Similarity=-0.024  Sum_probs=89.3

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE-cccCccHHHHHHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV-NMLCGSGLKSVTLTSRQ  137 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-~~aCaSGl~Al~~Aa~~  137 (160)
                      +.++.+|+.+|++++|+++|++|++||.+++++..+ ...+..++.++..+|++..+|++++ +++|+||++|+..|+++
T Consensus       110 ~~~~~~la~~Aa~~aL~~agl~~~~Id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~  188 (393)
T 1ted_A          110 YEHAVPLAVDVSKRALAGLPYRAAEIGLLVLATSTG-FIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNY  188 (393)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESSC-CCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCC-CccChHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHH
Confidence            357889999999999999999999999999999877 4467789999999999866889999 99999999999999999


Q ss_pred             HHcCCCcEEEEEeeccccc
Q psy4156         138 QVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       138 I~sG~~~vlivgG~E~mt~  156 (160)
                      |++|..+.++++|+|+||.
T Consensus       189 i~~G~~~~vLv~g~e~~s~  207 (393)
T 1ted_A          189 VRAHPAMKALVVCIELCSV  207 (393)
T ss_dssp             HHHSTTCEEEEEEEEECGG
T ss_pred             HHcCCCCEEEEEEEEeccc
Confidence            9999999999999999985

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.64  E-value=4.9e-16  Score=132.14  Aligned_cols=97  Identities=11%  Similarity=-0.007  Sum_probs=88.7

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE-cccCccHHHHHHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV-NMLCGSGLKSVTLTSRQ  137 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-~~aCaSGl~Al~~Aa~~  137 (160)
                      +.+..+|+.+|++++|+++|++|++||.+++++..+ ...+..+..++..+|++..+|++++ +++|+||+.|+..|+++
T Consensus        81 ~~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~-~~~p~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~  159 (382)
T 1u0m_A           81 EREAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDF  159 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCC-CCCCcHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999877 4456788999999999855899999 99999999999999999


Q ss_pred             HHcCCCcEEEEEeeccccc
Q psy4156         138 QVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       138 I~sG~~~vlivgG~E~mt~  156 (160)
                      |++|..+.++++|+|++|.
T Consensus       160 i~~g~~~~vLv~g~e~~s~  178 (382)
T 1u0m_A          160 CTAYPEANALIVACEFCSL  178 (382)
T ss_dssp             HHHSTTCEEEEEEEEEGGG
T ss_pred             HHcCCCCEEEEEEEeccch
Confidence            9999999999999999985

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=99.64  E-value=5.6e-16  Score=131.82  Aligned_cols=92  Identities=15%  Similarity=0.174  Sum_probs=81.1

Q ss_pred             CCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHH
Q psy4156          59 ELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        59 ~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I  138 (160)
                      +....+|+.+|++++|+++|++|+|||.+++|+..++  . ..+..++..+    ++|+++|+++|+|+++|+..|+.+|
T Consensus        52 e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q--~-~~A~~va~~L----gipafdV~~ACsg~~~AL~~Aa~~I  124 (347)
T 3lma_A           52 EMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQ--N-VTANYVARHL----KIPFLCLFGACSTSMESIAISSALI  124 (347)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSS--S-TTHHHHHHHH----CCCEEEBCCSTTHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCc--h-hHHHHHHHHh----CCCEEEecChhHHHHHHHHHHHHHH
Confidence            4566889999999999999999999999999998772  2 2566666665    3789999999999999999999999


Q ss_pred             HcCCCcEEEEEeecccccC
Q psy4156         139 VLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       139 ~sG~~~vlivgG~E~mt~~  157 (160)
                      ++|.++.++++|.|+||..
T Consensus       125 ~sG~~~~VLVVGaE~~S~a  143 (347)
T 3lma_A          125 DGGFAKRALAATSSHNATA  143 (347)
T ss_dssp             HTTSCSEEEEEEEECGGGT
T ss_pred             hcCCCCEEEEEEeccccch
Confidence            9999999999999999975

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=99.63  E-value=1.1e-15  Score=131.29  Aligned_cols=89  Identities=13%  Similarity=0.142  Sum_probs=78.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC-----------------C---------CCChHHHHHHHcCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG-----------------Q---------GQNPARQASIKANIPN  113 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~-----------------~---------g~~~ar~~al~~GLp~  113 (160)
                      +|+.++++++|+++|+++++||    .|++|+..+..                 .         ...++..++...|+. 
T Consensus        79 ~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-  157 (416)
T 1e5m_A           79 HFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAK-  157 (416)
T ss_dssp             HHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCC-
Confidence            7999999999999999999999    69999875431                 0         113678888899995 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                       -|+++|+.+|+||+.|++.|++.|++|..+++|++|+|+|
T Consensus       158 -gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~  197 (416)
T 1e5m_A          158 -GPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAA  197 (416)
T ss_dssp             -SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             -CceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence             5999999999999999999999999999999999999984

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=99.62  E-value=1.1e-15  Score=133.20  Aligned_cols=110  Identities=8%  Similarity=-0.017  Sum_probs=95.7

Q ss_pred             eccccccCcc--CCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCC--CCCCceEEEcc
Q psy4156          47 RTPIGSFLGS--LSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANI--PNEVPASLVNM  122 (160)
Q Consensus        47 rTpfg~~~g~--~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GL--p~~vPa~~V~~  122 (160)
                      ++++|.+...  ..++++.+|+.+|++++|+++|++|++||.+++|+..+....+..+..++..+|+  +..+|++++++
T Consensus        35 ~~g~G~~~~~~~~~~e~~~~La~~Aa~~aL~~agi~~~~Id~li~~t~t~~~~~p~~a~~v~~~lgl~g~~~~~~~~v~~  114 (450)
T 2f82_A           35 TIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTN  114 (450)
T ss_dssp             TTTSCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECCCCSCSSSCHHHHHTHHHHTTTCCCCBCCEECS
T ss_pred             hhhhCceeeeeCCCCCCHHHHHHHHHHHHHHHcCcCHHHCCEEEEEecCCCCCCCcHHHHHHHHhCCcCCCCceEEEhhh
Confidence            5666643322  3678999999999999999999999999999999988765567899999998898  44799999999


Q ss_pred             cCccHHHHHHHHHHHHHcCCC--cEEEEEeeccccc
Q psy4156         123 LCGSGLKSVTLTSRQQVLLTL--HWLGNGAQYHITA  156 (160)
Q Consensus       123 aCaSGl~Al~~Aa~~I~sG~~--~vlivgG~E~mt~  156 (160)
                      +|+||+.|+..|+++|++|..  +.++|+|.|+|+.
T Consensus       115 aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~~  150 (450)
T 2f82_A          115 ACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVY  150 (450)
T ss_dssp             GGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeeccc
Confidence            999999999999999999976  9999999999864

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.61  E-value=2e-15  Score=125.59  Aligned_cols=112  Identities=13%  Similarity=-0.026  Sum_probs=95.6

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.||.  .||.+.+++-... .+..+|+.+|++++|+++|+  ++||.+++|+..++...++.+..++..+|++ ..|++
T Consensus        33 ~~~i~--~~~Gi~~R~~~~~-~~~~~la~~Aa~~al~~ag~--~~id~vi~~t~~~~~~~p~~a~~v~~~lgl~-~~~~~  106 (331)
T 2x3e_A           33 DAWIS--SRTGVRQRHIAGD-LGSGDLALRAASAALASAGL--ERVDAVVLATSTGDFCCPATAPRVAARLGLV-GALAF  106 (331)
T ss_dssp             HHHHH--HHHCCCEEECCTT-CCHHHHHHHHHHHHHHHHTC--SCCSEEEEECSSCSEEESCSHHHHHHHTTCT-TSEEE
T ss_pred             HHHHH--HhhCceEEEecCC-CCHHHHHHHHHHHHHHhCCc--ccCCEEEEEeCCCCCCCChHHHHHHHHhCCC-CCcEE
Confidence            34444  4666665544333 78999999999999999999  8999999998876544567889999999997 58999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++++|+|+++|+..|+++|++|..+.++++|+|+|+.
T Consensus       107 ~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s~  144 (331)
T 2x3e_A          107 DLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFSH  144 (331)
T ss_dssp             EEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred             EEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecccc
Confidence            99999999999999999999999999999999999985

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=99.61  E-value=2.1e-15  Score=130.30  Aligned_cols=93  Identities=10%  Similarity=0.083  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC--------------------------CCChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ--------------------------GQNPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~--------------------------g~~~ar~~al~~GL  111 (160)
                      ..+|+.+|++++|+++|+++++||    .+++|+..+...                          ...+++.++...|+
T Consensus        92 ~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  171 (428)
T 3mqd_A           92 GTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKI  171 (428)
T ss_dssp             HHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCC
Confidence            456999999999999999999999    577777643211                          12367889999999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .  .|+++|+++|+||++|++.|++.|++|..|++|+||+|+|+.
T Consensus       172 ~--gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~~s~  214 (428)
T 3mqd_A          172 K--GINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDW  214 (428)
T ss_dssp             C--SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             C--CceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecccch
Confidence            5  599999999999999999999999999999999999999863

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=99.59  E-value=4e-15  Score=127.73  Aligned_cols=93  Identities=14%  Similarity=0.094  Sum_probs=79.1

Q ss_pred             HHHHHHHHHHHHHHHcCC-CccccC----ceEEEeeecCC--------------------------CCCChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANV-LPNEIS----EVILGQALTAG--------------------------QGQNPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI-~~~~ID----~vi~G~~~~~~--------------------------~g~~~ar~~al~~G  110 (160)
                      ..+|+.+|++++|+++|+ ++++||    .+++|+.....                          ..+.++..++...|
T Consensus        77 ~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  156 (412)
T 4ewg_A           77 VSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWD  156 (412)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhC
Confidence            356999999999999999 889999    78887764210                          01246788889999


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +.  -|+++|+++|+||++|++.|++.|++|..|++|+||+|+|+.
T Consensus       157 l~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~s~  200 (412)
T 4ewg_A          157 LK--GRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEELSG  200 (412)
T ss_dssp             CC--SCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             CC--CCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEeccccCCH
Confidence            95  499999999999999999999999999999999999999863

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=99.57  E-value=2.8e-15  Score=128.76  Aligned_cols=109  Identities=10%  Similarity=-0.010  Sum_probs=96.8

Q ss_pred             eccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCcc
Q psy4156          47 RTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGS  126 (160)
Q Consensus        47 rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaS  126 (160)
                      ++.+.+++-+..++++.+|+.+|++++|++++  |++||.+++++..+....+..+..++..+|++..+|+++++++|+|
T Consensus        41 ~~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~a~--~~~Id~li~~t~t~~~~~ps~a~~v~~~LGl~~~~~~~dv~~aC~g  118 (388)
T 3v4n_A           41 GIGQDQMAVNPISQDIVTFAANAAEAILTKED--KEAIDMVIVGTESSIDESKAAAVVLHRLMGIQPFARSFEIKEAXYG  118 (388)
T ss_dssp             TTCCCEEECCCTTCCHHHHHHHHHHTTCCHHH--HHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESGGGH
T ss_pred             HhCceEEEECCCCCCHHHHHHHHHHHHHHhCC--cccCCEEEEEeccCCCcCccHHHHHHHHcCCCCCceEeehhhhhhH
Confidence            45555555555789999999999999999986  9999999999988776667899999999999855999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         127 GLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       127 Gl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      |+.|+..|+.+|++|..+.+++.|.|+++..
T Consensus       119 g~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~  149 (388)
T 3v4n_A          119 ATAGLQLAKNHVALHPDKKVLVVAADIAKYG  149 (388)
T ss_dssp             HHHHHHHHHHHHHHCTTCEEEEEEEEEECCC
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEEEehhhccc
Confidence            9999999999999999999999999999863

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=99.57  E-value=1.4e-14  Score=127.31  Aligned_cols=93  Identities=12%  Similarity=0.128  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE-cccCccHHHHHHHHHHHHHc-
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV-NMLCGSGLKSVTLTSRQQVL-  140 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-~~aCaSGl~Al~~Aa~~I~s-  140 (160)
                      .+|+.+|+++||+++|++|++||.++++++. +...|..+..++..+|++..+++++| +++|+||++|+..|+++|++ 
T Consensus       111 ~~La~~Aa~~AL~~agi~~~dId~li~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~  189 (465)
T 3e1h_A          111 VPLAVEASRKAMAEARLVPAQITHMVSTTCT-DSANPGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGH  189 (465)
T ss_dssp             HHHHHHHHHHHHHHHTCCGGGCCEEEEECSS-CCCSSCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcc
Confidence            5999999999999999999999999999987 44567899999999999844558999 89999999999999999997 


Q ss_pred             ---CCCcEEEEEeeccccc
Q psy4156         141 ---LTLHWLGNGAQYHITA  156 (160)
Q Consensus       141 ---G~~~vlivgG~E~mt~  156 (160)
                         |.++.+++.|.|+||.
T Consensus       190 ~~~G~~~~vLVvg~E~~S~  208 (465)
T 3e1h_A          190 TARGKPARILVLALEVSTT  208 (465)
T ss_dssp             HHTTCCCEEEEEEEECCGG
T ss_pred             cccCCCCEEEEEEEeecch
Confidence               9899999999999985

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=99.54  E-value=4.7e-14  Score=121.01  Aligned_cols=91  Identities=10%  Similarity=0.048  Sum_probs=77.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecC-----------------CCCC---------ChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTA-----------------GQGQ---------NPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~-----------------~~g~---------~~ar~~al~~GL  111 (160)
                      ...|+.+|+++||+++|+++++||    .+++|+..+.                 ...+         .++..++...|+
T Consensus        74 ~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  153 (413)
T 3o04_A           74 FTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGA  153 (413)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCC
Confidence            355999999999999999999999    9999986411                 0011         136778888999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      . + |+++|+.+|+|+++|++.|++.|++|.++++|++|+|+|
T Consensus       154 ~-g-p~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~  194 (413)
T 3o04_A          154 K-G-INSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAP  194 (413)
T ss_dssp             C-S-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             C-C-cceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEccc
Confidence            5 4 999999999999999999999999999999999999984

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=99.52  E-value=1.3e-13  Score=119.09  Aligned_cols=90  Identities=12%  Similarity=0.058  Sum_probs=76.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC---------------------C----CC-ChHHHHHHHcCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISE----VILGQALTAG---------------------Q----GQ-NPARQASIKANIPN  113 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~---------------------~----g~-~~ar~~al~~GLp~  113 (160)
                      +|+.+|++++|+++|+++++||.    +++|+..++.                     .    .+ .++..++...|+. 
T Consensus        95 ~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~-  173 (430)
T 1ox0_A           95 LYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGAN-  173 (430)
T ss_dssp             HHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCC-
Confidence            79999999999999999999994    8888764321                     0    01 2566777888996 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      + |+++|+++|+||+.|+..|++.|++|..+++|++|+|.+.
T Consensus       174 G-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  214 (430)
T 1ox0_A          174 G-VCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASI  214 (430)
T ss_dssp             S-CEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             C-ceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            4 9999999999999999999999999999999999999864

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=99.52  E-value=1.1e-14  Score=124.70  Aligned_cols=106  Identities=12%  Similarity=0.005  Sum_probs=94.2

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .+|.+.+++-+..++++.+|+.+|++++|++  ++|++||.+++|+..+....++.+..++..+|++..+|+++++++|+
T Consensus        35 ~~~Gi~~r~~~~~~e~~~~la~~Aa~~aL~~--~~~~~Id~li~~t~~~~~~~p~~a~~v~~~lGl~~~~~~~~v~~aC~  112 (396)
T 1xpm_A           35 IGIGQTEMAVSPVNQDIVSMGANAAKDIITD--EDKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACY  112 (396)
T ss_dssp             TTTCCSEEEECCTTCCHHHHHHHHHHTTCCH--HHHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTT
T ss_pred             hhcCceEEEeCCCCCCHHHHHHHHHHHHHhc--CCHHHCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEeccccH
Confidence            3566665555556889999999999999988  79999999999998776556789999999999975699999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      ||+.|+..|+++|++|..+.++++|.|+
T Consensus       113 sg~~Al~~A~~~I~sg~~~~vLvvg~e~  140 (396)
T 1xpm_A          113 AATPAIQLAKDYLATRPNEKVLVIATDT  140 (396)
T ss_dssp             THHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence            9999999999999999999999999997

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=99.48  E-value=1.3e-13  Score=121.25  Aligned_cols=106  Identities=9%  Similarity=-0.009  Sum_probs=88.1

Q ss_pred             ccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHH---HHcCCCCCCceEEEcccC
Q psy4156          48 TPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQAS---IKANIPNEVPASLVNMLC  124 (160)
Q Consensus        48 Tpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~a---l~~GLp~~vPa~~V~~aC  124 (160)
                      +.+.+++-...+++..+|+.+|++.+|+++|++|++||.+++++..+....+..+..++   ..+|++ .+|+++++++|
T Consensus        59 ~Gi~~r~~~~~~e~~~~La~~Aa~~aL~~agi~~~dId~li~~T~t~~~~~ps~a~~v~~~L~~lG~~-~~~~~dv~~aC  137 (478)
T 2p8u_A           59 LGQAKMGFCTDREDINSLCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNT-DIEGIDTTNAC  137 (478)
T ss_dssp             CCCCEEECCCTTCCHHHHHHHHHHHHHHHTTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTTTTTCC-CCBCCEEESGG
T ss_pred             cCceEEEeCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCcccCccHHHHHHHHHhhcCCC-CceEEEEcchh
Confidence            33333333335789999999999999999999999999999999877655567777777   345565 79999999999


Q ss_pred             ccHHHHHHHHHHHHHcCC--CcEEEEEeeccc
Q psy4156         125 GSGLKSVTLTSRQQVLLT--LHWLGNGAQYHI  154 (160)
Q Consensus       125 aSGl~Al~~Aa~~I~sG~--~~vlivgG~E~m  154 (160)
                      +||+.|+..|..+|++|.  .+.++|.|.|..
T Consensus       138 ~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Eia  169 (478)
T 2p8u_A          138 YGGTAAVFNAVNWIESSSWDGRYALVVAGDIA  169 (478)
T ss_dssp             GHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHcCCccCCEEEEEEeeee
Confidence            999999999999999998  888888898853

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=99.48  E-value=7.3e-14  Score=120.51  Aligned_cols=91  Identities=12%  Similarity=0.086  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecC---------------------C-----CCCChHHHHHHHcCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTA---------------------G-----QGQNPARQASIKANIP  112 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~---------------------~-----~g~~~ar~~al~~GLp  112 (160)
                      ..|+.+|++++|+++|+++++||.    +++|+....                     .     ....++..++...|+.
T Consensus        89 ~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~  168 (427)
T 3ho9_A           89 IQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLR  168 (427)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCC
Confidence            468999999999999999999995    777765321                     0     0123566788888995


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                        -|+++|+.+|+||+.|++.|++.|++|..+++|++|+|+|+
T Consensus       169 --Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  209 (427)
T 3ho9_A          169 --GPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKAS  209 (427)
T ss_dssp             --SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             --CCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccC
Confidence              49999999999999999999999999999999999999996

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.46  E-value=2.2e-13  Score=127.00  Aligned_cols=95  Identities=9%  Similarity=-0.033  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEEcccCccHHHHHHHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLVNMLCGSGLKSVTLTSRQQVL  140 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V~~aCaSGl~Al~~Aa~~I~s  140 (160)
                      ..+|+.+|+++||+++|++|++||.+++++.. +...|..+..++..+|++.. .++++++.+|+||+.|+..|+++|++
T Consensus       689 ~~~la~~Aa~~AL~~agl~~~dId~ii~~t~~-~~~~p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~s  767 (979)
T 3tsy_A          689 VPKLGKEAALKALKEWGQPKSKITHLVFCTTS-GVEMPGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAEN  767 (979)
T ss_dssp             HHHHHHHHHHHHHHHHCSCGGGCCEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCHHHCCEEEEEeeC-CCCCCcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHh
Confidence            56699999999999999999999999999854 34457889999999999633 46999999999999999999999999


Q ss_pred             CCCcEEEEEeecccccC
Q psy4156         141 LTLHWLGNGAQYHITAD  157 (160)
Q Consensus       141 G~~~vlivgG~E~mt~~  157 (160)
                      |..+.++++|.|+++..
T Consensus       768 G~~~~vLvvg~e~~~~~  784 (979)
T 3tsy_A          768 NAGARVLVVCSEITVVT  784 (979)
T ss_dssp             STTCEEEEEEEECTTTT
T ss_pred             CCCCEEEEEEEEecchh
Confidence            99999999999997653

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=99.43  E-value=3.5e-13  Score=117.62  Aligned_cols=104  Identities=7%  Similarity=-0.030  Sum_probs=89.9

Q ss_pred             CceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCC--CCC
Q psy4156          38 NDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIP--NEV  115 (160)
Q Consensus        38 ~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp--~~v  115 (160)
                      .+.||.  .||.+.+++-+..+++..+|+.+|++.+|+++|++|++||.+++++.++....+..+..++..+|++  ..+
T Consensus        32 ~~~~i~--~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~a~i~~~~Id~ii~aT~t~~~~~ps~a~~v~~~l~~~g~~~~  109 (460)
T 2wya_A           32 EAGKYT--VGLGQTRMGFCSVQEDINSLCLTVVQRLMERIQLPWDSVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDI  109 (460)
T ss_dssp             CTTCCC--CCCCCCEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGEEEEEEECSCCSCSSSCHHHHHGGGTGGGTCCCC
T ss_pred             CHHHHH--HhhCcEEEEECCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCCCCCCchHHHHHHHHhccCCCCe
Confidence            356666  5788777777778999999999999999999999999999999999988776777888887777542  268


Q ss_pred             ceEEEcccCccHHHHHHHHHHHHHcCCC
Q psy4156         116 PASLVNMLCGSGLKSVTLTSRQQVLLTL  143 (160)
Q Consensus       116 Pa~~V~~aCaSGl~Al~~Aa~~I~sG~~  143 (160)
                      ++++++++|.+|.+|+..|..+|++|.+
T Consensus       110 ~a~D~~~aC~g~~~al~~A~~~i~~g~~  137 (460)
T 2wya_A          110 EGIDTTNACYGGTASLFNAANWMESSSW  137 (460)
T ss_dssp             BCCEEESGGGHHHHHHHHHHHHHTSTTC
T ss_pred             eEechhhhhhhHHHHHHHHHHHHHhccc
Confidence            8999999999999999999999999954

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=99.39  E-value=6.3e-13  Score=115.14  Aligned_cols=91  Identities=18%  Similarity=0.124  Sum_probs=79.7

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC--------------------------CCCChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG--------------------------QGQNPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~--------------------------~g~~~ar~~al~~GL  111 (160)
                      ..+|+.+|++++|+++|+++++||    .|++|+..++.                          ....++..++...|+
T Consensus        98 ~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl  177 (437)
T 2gqd_A           98 FTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGA  177 (437)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCC
Confidence            357999999999999999999999    99999875431                          012367888889999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      . + |+++|+.+|+||+.||+.|++.|++|..+++|++|+|+|
T Consensus       178 ~-g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  218 (437)
T 2gqd_A          178 K-G-PNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAP  218 (437)
T ss_dssp             C-S-SEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             C-C-ceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            5 4 999999999999999999999999999999999999985

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=99.39  E-value=6.7e-13  Score=113.79  Aligned_cols=92  Identities=11%  Similarity=0.084  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc-----eEEEeeecCC-------------C--------------CCChHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE-----VILGQALTAG-------------Q--------------GQNPARQASIKA  109 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~-----vi~G~~~~~~-------------~--------------g~~~ar~~al~~  109 (160)
                      ..+|+.++++++|+++|++++++|.     |++|+..+..             .              ...++..++...
T Consensus        71 ~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~l  150 (406)
T 2vba_A           71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF  150 (406)
T ss_dssp             HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhc
Confidence            4679999999999999999999997     9999876531             1              123677888889


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      |+.  -|+++|+.+|+||+.|++.|++.|++|..|++|+||+|+|+
T Consensus       151 gl~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~  194 (406)
T 2vba_A          151 KIH--GVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC  194 (406)
T ss_dssp             TCC--SCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             cCC--CceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            995  49999999999999999999999999999999999999985

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.38  E-value=1.4e-12  Score=111.94  Aligned_cols=89  Identities=19%  Similarity=0.110  Sum_probs=77.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC--------------------------CCCChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG--------------------------QGQNPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~--------------------------~g~~~ar~~al~~GL  111 (160)
                      ..+|+.++++++|+++|+++++||    .+++|+..++.                          ..+.++..++...|+
T Consensus        79 ~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  158 (415)
T 1tqy_B           79 STRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGM  158 (415)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCC
Confidence            467999999999999999999999    78888764321                          113477888899999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      .  -|+++|+.+|+||+.|++.|++.|++| .+++|++|+|+
T Consensus       159 ~--gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~  197 (415)
T 1tqy_B          159 R--GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDS  197 (415)
T ss_dssp             C--SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEEC
T ss_pred             C--CceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecC
Confidence            5  499999999999999999999999999 99999999998

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.35  E-value=2.2e-12  Score=110.35  Aligned_cols=91  Identities=14%  Similarity=0.193  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCCC-------------------------CC-ChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAGQ-------------------------GQ-NPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~~-------------------------g~-~~ar~~al~~GL  111 (160)
                      ..+|+.+|++++|+++|+++++||.    +++|+..++..                         .+ ..+..++...|+
T Consensus        71 ~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl  150 (408)
T 1j3n_A           71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF  150 (408)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCC
Confidence            4789999999999999999999996    55555432210                         12 356788888899


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      . + |+++|+.+|+||+.|++.|++.|++|..+++|++|+|++
T Consensus       151 ~-g-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  191 (408)
T 1j3n_A          151 T-G-PSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAA  191 (408)
T ss_dssp             C-S-CBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             C-C-ceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            5 4 999999999999999999999999999999999999985

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=99.34  E-value=2.1e-12  Score=111.54  Aligned_cols=92  Identities=16%  Similarity=0.135  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHHHHHHcCC-CccccC----ceEEEeeecCC------------C--------------CCChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANV-LPNEIS----EVILGQALTAG------------Q--------------GQNPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI-~~~~ID----~vi~G~~~~~~------------~--------------g~~~ar~~al~~G  110 (160)
                      ..+|+.+|++++|+++|+ +++++|    .+++|+..+..            .              ...++..++...|
T Consensus        88 ~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  167 (431)
T 2ix4_A           88 FIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYG  167 (431)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHC
Confidence            468999999999999999 999998    59999875420            0              0136778888999


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +.  -|+++|+.+|+||+.|++.|++.|++|..+++|++|+|+|+
T Consensus       168 l~--gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~  210 (431)
T 2ix4_A          168 FQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSI  210 (431)
T ss_dssp             CC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CC--CceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            95  49999999999999999999999999999999999999876

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=99.34  E-value=2.1e-12  Score=111.90  Aligned_cols=91  Identities=19%  Similarity=0.151  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCc-cccC----ceEEEeeecCC-------------------------CCC-ChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANVLP-NEIS----EVILGQALTAG-------------------------QGQ-NPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~-~~ID----~vi~G~~~~~~-------------------------~g~-~~ar~~al~~G  110 (160)
                      ..+|+.+|++++|+++|+++ +++|    .+++|+..++.                         ..+ .++..++...|
T Consensus        97 ~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lg  176 (438)
T 2iwz_A           97 PTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYK  176 (438)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhC
Confidence            45799999999999999999 8888    59999875431                         012 37788889999


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +. + |+++|+.+|+|++.|++.|++.|++|..+++|++|+|+|
T Consensus       177 l~-g-p~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  218 (438)
T 2iwz_A          177 LK-G-PNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSC  218 (438)
T ss_dssp             CC-S-CEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             CC-C-ceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehh
Confidence            95 4 999999999999999999999999999999999999974

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=99.33  E-value=1.5e-12  Score=113.24  Aligned_cols=92  Identities=15%  Similarity=0.101  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCcccc-C----ceEEEeeecC--------------------------CCCCChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEI-S----EVILGQALTA--------------------------GQGQNPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~I-D----~vi~G~~~~~--------------------------~~g~~~ar~~al~~G  110 (160)
                      ..+|+.+|+++||+++|+++++| |    .+++|+....                          ...+..+..++...|
T Consensus       102 ~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lg  181 (451)
T 4ddo_A          102 FIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHR  181 (451)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhc
Confidence            35699999999999999999999 7    5888875321                          011235667888889


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      +. + |+++|+.+|+||++|+..|++.|++|.++++|++|+|+++
T Consensus       182 l~-G-p~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~  224 (451)
T 4ddo_A          182 FR-G-PLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAF  224 (451)
T ss_dssp             CC-S-CEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCC
T ss_pred             CC-C-ceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEecccccc
Confidence            95 4 9999999999999999999999999999999999999975

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=99.33  E-value=3.5e-12  Score=110.15  Aligned_cols=90  Identities=17%  Similarity=0.173  Sum_probs=75.9

Q ss_pred             HHHHHHHHHHHHHHHcCCCccc-cC----ceEEEeeecC--------------------------CCCCChHHHHHHHcC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNE-IS----EVILGQALTA--------------------------GQGQNPARQASIKAN  110 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~-ID----~vi~G~~~~~--------------------------~~g~~~ar~~al~~G  110 (160)
                      ..+|+.+|+++||+++|+++++ +|    .+++|+....                          ...+..+..++...|
T Consensus        87 ~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lg  166 (428)
T 3kzu_A           87 FIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHK  166 (428)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcC
Confidence            4679999999999999999998 88    4777765321                          112235667888889


Q ss_pred             CCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         111 IPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       111 Lp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                      +.  -|+++|+.+|+||+.|++.|++.|++|..+++|++|+|+
T Consensus       167 l~--Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~  207 (428)
T 3kzu_A          167 LR--GPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTES  207 (428)
T ss_dssp             CC--SCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC
T ss_pred             CC--CceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecC
Confidence            95  499999999999999999999999999999999999998

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=99.32  E-value=2.6e-12  Score=110.48  Aligned_cols=91  Identities=21%  Similarity=0.231  Sum_probs=77.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC--------------C-------------CCC-hHH----HH
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG--------------Q-------------GQN-PAR----QA  105 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~--------------~-------------g~~-~ar----~~  105 (160)
                      ..+|+.++++++|+++|+++++||    .|++|+..++.              .             .++ .+.    .+
T Consensus        73 ~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~i  152 (424)
T 1tqy_A           73 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV  152 (424)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHH
Confidence            357999999999999999999999    59999875431              0             011 244    77


Q ss_pred             HHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         106 SIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       106 al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +...|+.  -|+++|+.+|+||+.|++.|++.|++|..+++|++|+|.|
T Consensus       153 a~~lgl~--gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~  199 (424)
T 1tqy_A          153 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP  199 (424)
T ss_dssp             HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             HHhcCCC--CceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeeccc
Confidence            7888985  4999999999999999999999999999999999999986

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=99.28  E-value=8.8e-12  Score=117.63  Aligned_cols=91  Identities=14%  Similarity=0.069  Sum_probs=78.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC-------------------CCCChHHHHHHHcCCCCCCceEE
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG-------------------QGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~-------------------~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      ..|+.+++.++|+++|++|+++|    .+++|+..+++                   ....++..++...|+. + |+++
T Consensus        81 ~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~-G-Ps~t  158 (965)
T 3hhd_A           81 LRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFR-G-PSIA  158 (965)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCC-S-CEEE
T ss_pred             HHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCC-C-Ceee
Confidence            34999999999999999999999    68888654331                   1123667788889995 4 9999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      |+.+|+||+.|+++|++.|++|..|++|+||+|.|+
T Consensus       159 vdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~  194 (965)
T 3hhd_A          159 LDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLL  194 (965)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             ecCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccc
Confidence            999999999999999999999999999999999986

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=99.23  E-value=2.8e-11  Score=113.67  Aligned_cols=93  Identities=17%  Similarity=0.149  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCCCC------------------CChHHHHHHHcCCCCCCceEE
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAGQG------------------QNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~~g------------------~~~ar~~al~~GLp~~vPa~~  119 (160)
                      ..+|+.+++.++|+++|+++++||.    |++|+..+++..                  ..++..++...|+. + |+++
T Consensus        95 ~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~-G-ps~t  172 (915)
T 2qo3_A           95 QQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTAAAEDVEGYSVTGVAPAVASGRISYTMGLE-G-PSIS  172 (915)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC---CTTCHHHHTTCHHHHHHHHHHHHTBC-S-CEEE
T ss_pred             HHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhcccccccccccccccccHHHHHHHHHhCCC-C-CEEE
Confidence            3579999999999999999999996    899987655421                  13567788888995 4 9999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+.+|+|++.|+++|++.|++|..+++|+||+|.|+.
T Consensus       173 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~  209 (915)
T 2qo3_A          173 VDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMAT  209 (915)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSS
T ss_pred             ECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcC
Confidence            9999999999999999999999999999999999863

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=99.23  E-value=3.7e-11  Score=112.86  Aligned_cols=92  Identities=17%  Similarity=0.141  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCCCC-------------------CChHHHHHHHcCCCCCCceEE
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAGQG-------------------QNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~~g-------------------~~~ar~~al~~GLp~~vPa~~  119 (160)
                      ..|+.+++.++|+++|++++++|.    |++|+..+++..                   ..++..++...|+. + |+++
T Consensus       117 ~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~-G-ps~t  194 (917)
T 2hg4_A          117 QRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLE-G-PAMT  194 (917)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCC-S-CEEE
T ss_pred             HHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCC-C-CeEe
Confidence            458999999999999999999996    899988655321                   12566788888995 4 9999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+.+|+|++.|+++|++.|++|..+++|+||+|.|+.
T Consensus       195 v~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~  231 (917)
T 2hg4_A          195 VDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSS  231 (917)
T ss_dssp             EECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCS
T ss_pred             ecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccC
Confidence            9999999999999999999999999999999999864

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=99.20  E-value=5.6e-11  Score=102.31  Aligned_cols=90  Identities=16%  Similarity=0.159  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCCC-----------------CC---------ChHHHHHHHcCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAGQ-----------------GQ---------NPARQASIKANIP  112 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~~-----------------g~---------~~ar~~al~~GLp  112 (160)
                      .+|+.++++++|+++|+  +++|.    +++|+..++..                 .+         ..+..++...|+.
T Consensus        84 ~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~  161 (416)
T 2wge_A           84 QRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGAR  161 (416)
T ss_dssp             HHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccC
Confidence            46999999999999998  44553    88988754321                 01         2566778888985


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                        -|+++++.+|+||++|++.|++.|++|..+++|++|+|+|+.
T Consensus       162 --gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~  203 (416)
T 2wge_A          162 --AGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIE  203 (416)
T ss_dssp             --SCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCC
T ss_pred             --CCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccc
Confidence              599999999999999999999999999999999999998764

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=99.18  E-value=9.3e-11  Score=101.58  Aligned_cols=91  Identities=14%  Similarity=0.133  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHcCCC---ccccCceEEEeeecCCC-------------------------CC-ChHHHHHHHcCCCC
Q psy4156          63 HDLGSTAIKEVLKRANVL---PNEISEVILGQALTAGQ-------------------------GQ-NPARQASIKANIPN  113 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~---~~~ID~vi~G~~~~~~~-------------------------g~-~~ar~~al~~GLp~  113 (160)
                      .+|+.+|++++|+++|++   +++| .+++|+..++..                         .+ ..+..++...|+. 
T Consensus       100 ~~l~l~aa~~ALedAG~~~~~~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~-  177 (434)
T 2gp6_A          100 QRMSTVLSRRLWENAGSPEVDTNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAK-  177 (434)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCTTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCC-
T ss_pred             HHHHHHHHHHHHHhcCCCccCCCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCC-
Confidence            579999999999999984   4555 478887654320                         01 2567788889995 


Q ss_pred             CCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         114 EVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       114 ~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                       -|+++|+.+|+|++.|++.|++.|++|..+++|++|+|+++.
T Consensus       178 -Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~  219 (434)
T 2gp6_A          178 -AGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIE  219 (434)
T ss_dssp             -SCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCC
T ss_pred             -CCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccC
Confidence             599999999999999999999999999999999999998764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.93  E-value=1e-09  Score=112.86  Aligned_cols=93  Identities=13%  Similarity=-0.015  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC--------ceEEEeeecCC-----------------------CCCC--hHHHHHHH
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS--------EVILGQALTAG-----------------------QGQN--PARQASIK  108 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID--------~vi~G~~~~~~-----------------------~g~~--~ar~~al~  108 (160)
                      ...|+.+++.+||+++|++|++|+        .+++|+..+..                       ..++  .+|.+..+
T Consensus      2647 ~~rL~l~aa~eALedAGi~p~~l~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~is~~~ 2726 (3089)
T 3zen_D         2647 VALWNIVATVDAFLSSGFTPTELMRWVHPSQVASTQGTGMGGMTSMQTMYHGNLLGRAKPNDILQEVLPNVVAAHVMQSY 2726 (3089)
T ss_dssp             HHHHHHHHHHHHHTTSCSCGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHHHHHTTCCCCTTHHHHTSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHcCCCHHHhhcccCcceeEEEEeecCccHHHHHHHHHHHhcCCCccchhhccccccHHHHHHHHHH
Confidence            456999999999999999999986        48888764210                       0011  33444455


Q ss_pred             cCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         109 ANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       109 ~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .|+.  -|+++|+.+|+||+.||++|++.|++|..+++|+||+|.|+.
T Consensus      2727 lGl~--GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~ls~ 2772 (3089)
T 3zen_D         2727 VGGY--GAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDDLTL 2772 (3089)
T ss_dssp             TCCC--SCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             cCCC--CCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecccCH
Confidence            6984  599999999999999999999999999999999999999864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.63  E-value=4.9e-08  Score=97.12  Aligned_cols=92  Identities=11%  Similarity=0.026  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHcCC-Cccc----cCc----eEEEeeecCC-----------------------CCCC-hHHHHHH-H
Q psy4156          63 HDLGSTAIKEVLKRANV-LPNE----ISE----VILGQALTAG-----------------------QGQN-PARQASI-K  108 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI-~~~~----ID~----vi~G~~~~~~-----------------------~g~~-~ar~~al-~  108 (160)
                      ..|+.+++.++|+++|+ +|.+    |+.    +++|+..+..                       ...+ .+..++. .
T Consensus      1212 ~~l~L~aa~eAL~dAGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~ 1291 (1887)
T 2uv8_A         1212 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1291 (1887)
T ss_dssp             HHHHHHHHHHHHHHTTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHcCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHH
Confidence            44788999999999999 5877    444    4444432210                       0012 2334444 4


Q ss_pred             cCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         109 ANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       109 ~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .|+.  -|+++++.+|+||+.|++.|++.|++|..+++|+||+|.|+.
T Consensus      1292 lgl~--GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~~~~ 1337 (1887)
T 2uv8_A         1292 ISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQE 1337 (1887)
T ss_dssp             TCCC--SCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCH
T ss_pred             cCCc--cceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeeccCCh
Confidence            7874  599999999999999999999999999999999999999864

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.62  E-value=1.5e-08  Score=99.02  Aligned_cols=93  Identities=11%  Similarity=0.049  Sum_probs=70.4

Q ss_pred             HHHHHHHHHHHHHHcCCC-ccc----cC----ceEEEeeecCCC-----------------------CCC-hHHHHHH-H
Q psy4156          63 HDLGSTAIKEVLKRANVL-PNE----IS----EVILGQALTAGQ-----------------------GQN-PARQASI-K  108 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~-~~~----ID----~vi~G~~~~~~~-----------------------g~~-~ar~~al-~  108 (160)
                      ..|+.+++.+||+++|++ |.+    |+    .+++|+..++..                       .++ .+..++. .
T Consensus      1013 qrLaLeAa~EALedAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~ 1092 (1688)
T 2pff_A         1013 TLFVLVSVVEAFIASGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLL 1092 (1688)
T ss_dssp             TTHHHHHHHHHHTTTTCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHcCCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHH
Confidence            458999999999999998 766    33    345554332210                       011 2233444 5


Q ss_pred             cCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         109 ANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       109 ~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      .|+.  -|+++++.+|+|++.|++.|++.|++|..+++|+||+|.|+..
T Consensus      1093 LGl~--GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~msp~ 1139 (1688)
T 2pff_A         1093 ISSS--GPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDDFQEE 1139 (1688)
T ss_dssp             CCCC--CCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCCCCTT
T ss_pred             cCCc--CCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeeccCCHH
Confidence            6774  5999999999999999999999999999999999999998753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.59  E-value=8.7e-08  Score=95.30  Aligned_cols=92  Identities=13%  Similarity=0.070  Sum_probs=69.7

Q ss_pred             HHHHHHHHHHHHHHcCCC-ccc----cCc----eEEEeeecCC---------------------CC--CC-hHHHHHH-H
Q psy4156          63 HDLGSTAIKEVLKRANVL-PNE----ISE----VILGQALTAG---------------------QG--QN-PARQASI-K  108 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~-~~~----ID~----vi~G~~~~~~---------------------~g--~~-~ar~~al-~  108 (160)
                      ..|+.+++.++|+++||+ |.+    |+.    +++|+..++.                     ++  .+ ++..+.. .
T Consensus      1187 ~~l~L~aa~eAL~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~ 1266 (1878)
T 2uv9_A         1187 TLYVLVSVAEALLSSGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLL 1266 (1878)
T ss_dssp             HHHHHHHHHHHHHTTTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHh
Confidence            347889999999999998 776    443    4555443220                     00  11 2334444 4


Q ss_pred             cCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         109 ANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       109 ~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      .|+.  -|+++++.+|+|++.||+.|++.|++|..+++||||+|.|+.
T Consensus      1267 lg~~--GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~~~~ 1312 (1878)
T 2uv9_A         1267 LSST--GPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDDFQE 1312 (1878)
T ss_dssp             CCCC--CCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEECCCH
T ss_pred             cCCC--CCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeeccCCh
Confidence            7774  599999999999999999999999999999999999999863

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.38  E-value=8.5e-07  Score=90.55  Aligned_cols=89  Identities=12%  Similarity=0.082  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHcCCCccccC----ceEEEeeecCC--------C----------CC-ChHHHHHHHcCCCCCCceEEE
Q psy4156          64 DLGSTAIKEVLKRANVLPNEIS----EVILGQALTAG--------Q----------GQ-NPARQASIKANIPNEVPASLV  120 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~--------~----------g~-~~ar~~al~~GLp~~vPa~~V  120 (160)
                      .|+.+++.+||+++|++++.++    .|++|+...++        .          .. .++..++...|+.  =|+++|
T Consensus        80 rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~--Gps~tv  157 (2512)
T 2vz8_A           80 RMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFK--GPSITI  157 (2512)
T ss_dssp             HHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCC--SCEEEE
T ss_pred             HHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCC--CCceee
Confidence            4788999999999999987765    57888764321        0          01 1455677778884  799999


Q ss_pred             cccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         121 NMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       121 ~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +.+|+|++.|+++|++.|++|..|+.|+||++-|
T Consensus       158 ~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~  191 (2512)
T 2vz8_A          158 DTACSSSLLALQSAYQAIRGGECSAAVVGGLNVL  191 (2512)
T ss_dssp             ECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECC
T ss_pred             ccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccc
Confidence            9999999999999999999999999999999975

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=88.75  E-value=1.2  Score=35.50  Aligned_cols=64  Identities=20%  Similarity=0.175  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEE----cccCccHHHHHHHH
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLV----NMLCGSGLKSVTLT  134 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V----~~aCaSGl~Al~~A  134 (160)
                      -..++++++|+++|++|+|||.++.-.     .+..+...+....|++.+ +| .++    |..++|+..++..+
T Consensus       213 ~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~-~~~~~~Gh~~~as~~~~L~~~  281 (313)
T 1zow_A          213 IMGDASTRVVEKANLTSDDIDLFIPHQ-----ANIRIMESARERLGISKDKMS-VSVNKYGNTSAASIPLSIDQE  281 (313)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBC-CCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHHH-HhHhhhCchHHHHHHHHHHHH
Confidence            456788999999999999999876421     122234455666788643 33 223    34555666666544

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=87.42  E-value=1.7  Score=34.96  Aligned_cols=45  Identities=11%  Similarity=0.098  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      -..++++++|+++|++++|||.++.-.     .+..+...+...+|++.+
T Consensus       233 ~~~~~i~~al~~agl~~~dId~~~~H~-----~~~~~~~~~~~~lg~~~~  277 (335)
T 1u6e_A          233 KMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPD  277 (335)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHcCCCch
Confidence            456788999999999999999876421     222344556677898754

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=86.51  E-value=2.1  Score=34.12  Aligned_cols=65  Identities=9%  Similarity=-0.008  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE----cccCccHHHHHHHH
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV----NMLCGSGLKSVTLT  134 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V----~~aCaSGl~Al~~A  134 (160)
                      -..++++++|+++|++|+|||.++.-     +.+..+...+....|++...-...+    |..++|...++..+
T Consensus       219 ~~~~~i~~aL~~agl~~~did~v~~H-----~~~~~~~d~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~  287 (317)
T 1hnj_A          219 ELAHIVDETLAANNLDRSQLDWLVPH-----QANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEA  287 (317)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEEC-----CSCHHHHHHHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEc-----CCCHHHHHHHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHH
Confidence            45678899999999999999987542     1222344566677888643111222    23455555555543

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=86.33  E-value=2  Score=34.08  Aligned_cols=65  Identities=29%  Similarity=0.225  Sum_probs=41.3

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEE----cccCccHHHHHHHHH
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLV----NMLCGSGLKSVTLTS  135 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V----~~aCaSGl~Al~~Aa  135 (160)
                      -..++++++|+++|++|+|||.+..-.     .+..+...+....|++.+ ++ .++    |-.++|+..++..+.
T Consensus       211 ~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~~~~~~~lg~~~~~~~-~~~~~~Gh~~~As~~~~L~~~~  280 (309)
T 2ebd_A          211 SMEEVCREVLEKAGVKPEEVSLVIPHQ-----ANVRIINALAEKLNIPKEKVF-VNIQKYGNTSAASIPIALHEAI  280 (309)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHHTTCCGGGBC-CCHHHHCBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHhh-hhHhhhcchHHHHHHHHHHHHH
Confidence            456789999999999999999765421     122234456677888642 33 222    345666666666544

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=85.68  E-value=1.6  Score=35.25  Aligned_cols=46  Identities=13%  Similarity=0.205  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      +-..++++++|+++|++++|||.++.-     +.+..+-..+...+|+|.+
T Consensus       224 ~~~~~~i~~aL~~agl~~~did~~~~H-----~~~~~~~d~~~~~lg~~~~  269 (331)
T 2x3e_A          224 TQMSDSVRRVLDRVGWQASDLHHLVPH-----QANTRILAAVADQLDLPVE  269 (331)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEEC-----CCCHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEc-----CCCHHHHHHHHHHcCCCHH
Confidence            456778999999999999999987652     1222344556777888743

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=85.63  E-value=2.5  Score=35.03  Aligned_cols=73  Identities=15%  Similarity=0.035  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHH-HHHHcC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTS-RQQVLL  141 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa-~~I~sG  141 (160)
                      +...++++++|+++|++++|||.++.=+     ....+-..++..+|+|.+.-..++.+--.++...+-.+. ..++.|
T Consensus       266 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~Lgl~~ek~~~~l~~~GNtssAsipl~L~~~~~~g  339 (365)
T 3gwa_A          266 AEVPRAADRLLALAGEPRENIDCFVLHQ-----ANRFMLDALRKKMKIPEHKFPVLMEHCGNTVSSTLPLALETMRANG  339 (365)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECC-----CCHHHHHHHHHHHTCCGGGSCCCCTTTCBCGGGHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHhCCCHHHHHHHHhcccchHHHHHHHHHHHHHHcC
Confidence            4456778899999999999999876421     123355677888899864333455544333333333333 234556

>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A

Probab=85.44  E-value=0.54  Score=36.96  Aligned_cols=29  Identities=21%  Similarity=0.297  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEe
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQ   91 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~   91 (160)
                      .+....+++++|+++|+.++|||.+.++.
T Consensus        35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~   63 (231)
T 2gel_A           35 TQRILPMVQEILAASGASLNEIDALAFGR   63 (231)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHCCEEEEEc
Confidence            34567899999999999999999999876

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=85.44  E-value=3.4  Score=33.39  Aligned_cols=46  Identities=13%  Similarity=0.096  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      +-..++++++|+++|++++|||.++.-.     .+..+...+...+|+|.+
T Consensus       231 ~~~~~~i~~aL~~agl~~~did~v~~H~-----~~~~~~d~i~~~lg~~~~  276 (339)
T 1mzj_A          231 ADVVPAAREALEVAGLTVGDLVAFVPHQ-----ANLRIIDVLVDRLGVPEH  276 (339)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCCCcc
Confidence            4566789999999999999999875421     222344556677898754

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=85.00  E-value=1.4  Score=36.09  Aligned_cols=45  Identities=7%  Similarity=0.020  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      ...++++++|+++|++++|||.++.=     .....+-..++..+|+|.+
T Consensus       247 ~~~~~i~~~l~~~gl~~~did~~v~H-----q~~~~i~~~~~~~lgl~~e  291 (345)
T 3s21_A          247 LAQKTFVAAKQVLGWAVEELDQFVIH-----QVSRPHTAAFVKSFGIDPA  291 (345)
T ss_dssp             HHHHHHHHHHHHHCCCGGGCSEEEEC-----CSCHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEeC-----CCCHHHHHHHHHHcCcCHH
Confidence            44567788999999999999987641     1122355677778899854

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=84.69  E-value=2.7  Score=34.10  Aligned_cols=54  Identities=19%  Similarity=0.162  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      +...++++++|+++|++++|||.++.=     ..+..+-..++..+|+|.+.-..++++
T Consensus       234 ~~~~~~i~~~l~~~gl~~~did~~~~H-----q~~~~i~~~~~~~lgl~~~~~~~~l~~  287 (333)
T 4dfe_A          234 NVLEKVAVEALEKANLSAEQIDWLIPH-----QANIRIMQSTCRKLGLPQERMIVTVGE  287 (333)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEEC-----CSCHHHHHHHHHHTTCCGGGBCCCHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEc-----CCCHHHHHHHHHHhCCCHHHhhhhHHh
Confidence            455678899999999999999977541     112235567778889985433334443

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=84.11  E-value=1  Score=37.46  Aligned_cols=79  Identities=15%  Similarity=0.012  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc----cCccHHHHHHHHHHHHH
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM----LCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~----aCaSGl~Al~~Aa~~I~  139 (160)
                      +...++++++|+++|++++|||.++.=+     ....+-..++..+|+|.+.-..++++    .++|-.-++..+.+.+.
T Consensus       254 ~~~~~~i~~~L~~~gl~~~did~~v~Hq-----~n~~i~~~~~~~lgl~~ek~~~~l~~~GNt~sAsi~l~L~~~~~~l~  328 (359)
T 3h78_A          254 QTLVRIAGEMLAAHELTLDDIDHVICHQ-----PNLRILDAVQEQLGIPQHKFAVTVDRLGNMASASTPVTLAMFWPDIQ  328 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCSEEEECC-----SCHHHHHHHHHHHTCCGGGBCCCHHHHCBCGGGHHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEECC-----CCHHHHHHHHHHhCcCHHHhhhhhhcccchHHHHHHHHHHHHHHhCC
Confidence            3455788899999999999999875421     12235567777889985432234443    33444445554444444


Q ss_pred             cCCCcEEEE
Q psy4156         140 LLTLHWLGN  148 (160)
Q Consensus       140 sG~~~vliv  148 (160)
                      .|. .++++
T Consensus       329 ~Gd-~vll~  336 (359)
T 3h78_A          329 PGQ-RVLVL  336 (359)
T ss_dssp             TTC-EEEEE
T ss_pred             CCC-EEEEE
Confidence            443 34443

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=83.66  E-value=1.4  Score=37.10  Aligned_cols=83  Identities=11%  Similarity=0.031  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCce-------EEEc-------ccCccHHHHH
Q psy4156          66 GSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPA-------SLVN-------MLCGSGLKSV  131 (160)
Q Consensus        66 ~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa-------~~V~-------~aCaSGl~Al  131 (160)
                      +.+.+++.|+++|++|+|+|.++-|...+  .+..+.+.+....|+|.+.--       ++-+       .+|+.+...+
T Consensus       209 A~~ti~~~l~d~g~~~~d~D~ivtgdL~q--~g~~il~~l~~~~g~~~~~~~~dcg~~iy~~~~~~~~ggsg~~csa~v~  286 (347)
T 3lma_A          209 AADTIKQHLEDLGRTPDDYDLILTGDLSG--VGSPILKDLLKEEGINVGTKHNDCGLMIYTPDQQVFAGGSGCACSAVVT  286 (347)
T ss_dssp             HHHHHHHHHHHHTCCGGGCSEEEEESCHH--HHHHHHHHHHHHTTCCCGGGEEEGGGTSSCC---------CCCCHHHHH
T ss_pred             HHHHHHHHHHHhCCCHHHcCEEecCChHH--HHHHHHHHHHHHcCCChhHCccccceEEecCCCcccCCCCccccHHHHH
Confidence            34555888889999999999998553221  133467778888888742211       1212       2455444333


Q ss_pred             H-HHHHHHHcC-CCcEEEEEe
Q psy4156         132 T-LTSRQQVLL-TLHWLGNGA  150 (160)
Q Consensus       132 ~-~Aa~~I~sG-~~~vlivgG  150 (160)
                      . .-...++.| ..++++++-
T Consensus       287 ~~~~~~~~~~g~~~ril~~~t  307 (347)
T 3lma_A          287 FAHIFKEIEAGRLNRVLVVAT  307 (347)
T ss_dssp             HHTHHHHHHTTSCSEEEEEEE
T ss_pred             HHHHHHHHhcCcccEEEEEec
Confidence            2 234568888 557777654

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=83.10  E-value=1.9  Score=35.14  Aligned_cols=53  Identities=11%  Similarity=0.043  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      ...++++++|+++|++++|||.++.=+     ....+-..++..+|+|.+.-..++++
T Consensus       225 ~~~~~i~~~l~~~gl~~~did~~v~Hq-----~~~~i~~~~~~~lgl~~ek~~~~l~~  277 (323)
T 3il3_A          225 ELSNVVEETLLANNLDKKDLDWLVPHQ-----ANLRIITATAKKLEMDMSQVVVTLDK  277 (323)
T ss_dssp             HHHHHHHHHHHTTTCCTTTCCEEEECC-----SCHHHHHHHHHHTTCCGGGBCCCHHH
T ss_pred             HHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCcCHHHhhccHhh
Confidence            455778899999999999999775421     12235567788889986433334543

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=82.24  E-value=5.1  Score=31.88  Aligned_cols=65  Identities=22%  Similarity=0.178  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC-CceEEE----cccCccHHHHHHHH
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE-VPASLV----NMLCGSGLKSVTLT  134 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~-vPa~~V----~~aCaSGl~Al~~A  134 (160)
                      +-..++++++|+++|++|+|||.++.-.     .+..+...+....|++.+ ++ .++    |..++|+..++..+
T Consensus       220 ~~~~~~i~~al~~agl~~~did~~~~H~-----~~~~~~d~~~~~lg~~~~~~~-~~~~~~Gh~~~As~~~~l~~~  289 (322)
T 1ub7_A          220 RVMNTATLEAIEKAGLTPEDIRLFVPHQ-----ANLRIIDAARERLGLPWERVA-VNVDRYGNTSTASIPLALKEA  289 (322)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCSEEEECC-----SCHHHHHHHHHTTTCCGGGBC-CCHHHHCBCGGGHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHCCEEEEcC-----CCHHHHHHHHHHcCCCHHHHH-HHHHhhCcHHHHHHHHHHHHH
Confidence            4566789999999999999999875422     122234456667788642 33 122    23455565555543

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=82.17  E-value=2  Score=35.87  Aligned_cols=75  Identities=17%  Similarity=0.048  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc--------ccCccHHHHHHHHHHHH
Q psy4156          67 STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN--------MLCGSGLKSVTLTSRQQ  138 (160)
Q Consensus        67 ~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~--------~aCaSGl~Al~~Aa~~I  138 (160)
                      ..+++++|+++|++|+|||.+.+...     ............|++. -| +.++        -..+||+..+..+..++
T Consensus       297 ~~ai~~al~~agl~~~dId~ve~~d~-----fa~~~~~~~~~lg~~~-~~-v~~~gg~~~~Gh~~gasG~~~~~~~~~~L  369 (395)
T 4e1l_A          297 IPATRKALKKAGLSINDIDLIEANEA-----FAAQALAVKNELQIDS-SK-LNVNGGAIALGHPIGASGARILVTLIYEM  369 (395)
T ss_dssp             HHHHHHHHHHTTCCGGGCSEEEECCS-----BHHHHHHHHHHHTCCG-GG-BSTTCCHHHHCCCTTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHHHcCEEEecCh-----hHHHHHHHHHHhCCCC-CC-CCcCCchhhcCCcHHHHHHHHHHHHHHHH
Confidence            57899999999999999998875211     1123334455668752 22 1122        23577887888888888


Q ss_pred             HcCCCcEEEE
Q psy4156         139 VLLTLHWLGN  148 (160)
Q Consensus       139 ~sG~~~vliv  148 (160)
                      +....+..++
T Consensus       370 ~~~~~~~gl~  379 (395)
T 4e1l_A          370 QKRKVETGLA  379 (395)
T ss_dssp             HHHTCSEEEE
T ss_pred             HhcCCCEEEE
Confidence            7643344443

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=82.16  E-value=3.7  Score=33.29  Aligned_cols=46  Identities=17%  Similarity=0.251  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      ...++++++|+++|++++|||.++.    + ..+..+-..++..+|+|.+.
T Consensus       250 ~~~~~i~~~L~~~gl~~~did~~v~----H-q~~~~i~~~~~~~Lgl~~~~  295 (350)
T 4ewp_A          250 SMAKVAREALDAAGVEPEDLAAFIP----H-QANMRIIDEFAKQLKLPESV  295 (350)
T ss_dssp             THHHHHHHHHHHHTCCGGGEEEEEE----C-CSCHHHHHHHHHHTTCCTTS
T ss_pred             hhhHHHHHHHHhhcCChhHhceEEe----c-CCCHHHHHHHHHHcCcChHh
Confidence            3457788999999999999998753    1 11234556778889998654

>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}

Probab=82.06  E-value=0.76  Score=35.97  Aligned_cols=63  Identities=22%  Similarity=0.253  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCC----CChHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHH
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQG----QNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTS  135 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g----~~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa  135 (160)
                      +.....++++|+++|++++|||.+.++.--+.+.+    ...++.++...    ++|.+.|+     .+.++...+
T Consensus        37 ~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~----~iPl~gVs-----tL~a~a~~~  103 (213)
T 3r6m_A           37 KKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGA----ELPMIGVS-----TLAAMAQAS  103 (213)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHT----TCCEEEEE-----HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHh----CCCEEEEc-----CHHHHHHhh
Confidence            44457999999999999999999998874222122    12344444443    46666663     455555443

>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2

Probab=80.51  E-value=5.3  Score=29.68  Aligned_cols=60  Identities=15%  Similarity=0.177  Sum_probs=39.4

Q ss_pred             CHHHHH---HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEccc
Q psy4156          61 KAHDLG---STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNML  123 (160)
Q Consensus        61 ~~~dL~---~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~a  123 (160)
                      +++++.   .+..++.+++++|+++||=.+++.. +++-...++|..+ ...|+. .+|-+..+..
T Consensus        45 t~e~I~~At~ELl~eii~~N~l~~eDIvSv~FTv-T~DL~A~FPA~aa-R~~Gw~-~VPLmc~qEm  107 (148)
T 1xho_A           45 TADEIVAETQKLLKEMAEKNGLEEDDIISIIFTV-TKDLDAAFPAIAA-RNMGWT-STALMCMNEI  107 (148)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-CTTCCSSCTHHHH-HHTTCT-TSEEEEEECC
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEe-CCccCccChHHHH-HHcCCC-ccchhhcccC
Confidence            455543   2344566778999999999888865 4554444555433 344986 8998877654

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=80.13  E-value=3.7  Score=34.09  Aligned_cols=45  Identities=16%  Similarity=0.103  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCC
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNE  114 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~  114 (160)
                      -..++++++|+++|++++|||.++.-.     .+..+-..+...+|+|.+
T Consensus       288 ~~~~~i~~aL~~agl~~~dId~~~~H~-----~~~~i~d~~~~~lgl~~~  332 (393)
T 1ted_A          288 GVAPVVTEMLWDNGLQISDIDLWAIHP-----GGPKIIEQSVRSLGISAE  332 (393)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCSCEEECC-----SCHHHHHHHHHHHTCCGG
T ss_pred             HHHHHHHHHHHHcCCCHhHCCEEEECC-----CcHHHHHHHHHHcCCCHH
Confidence            456778999999999999999876521     122345567777899754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1m3ka1	268	c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea	2e-31
d1ulqa1	273	c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {T	2e-29
d1afwa1	269	c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Sacch	1e-20
d1wdkc1	262	c.95.1.1 (C:2-263) Fatty oxidation complex beta su	8e-20

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Length = 268

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

 Score =  111 bits (279), Expect = 2e-31
 Identities = 57/125 (45%), Positives = 77/125 (61%)

Query: 36  SDNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTA 95
           S   +VI SAART +GSF G+ +   AH+LG+T I  VL+RA V   E++EVILGQ L A
Sbjct: 1   STPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPA 60

Query: 96  GQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT 155
           G+GQNPARQA++KA +P E  A  +N L GSGL++V L  +Q        +  G    ++
Sbjct: 61  GEGQNPARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMS 120

Query: 156 ADAHG 160
              H 
Sbjct: 121 MAPHC 125

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Length = 273

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

 Score =  106 bits (266), Expect = 2e-29
 Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 1/100 (1%)

Query: 39  DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-Q 97
           +  IV A RTPIG   G+L+ ++  DL + A+  ++ R+ V   E+ +V  G A  AG  
Sbjct: 1   EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGED 60

Query: 98  GQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQ 137
            +N AR A + A  P EV    VN LCGSGL++V   +R 
Sbjct: 61  NRNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARA 100

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 269

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.4 bits (205), Expect = 1e-20
 Identities = 36/137 (26%), Positives = 54/137 (39%), Gaps = 6/137 (4%)

Query: 30  RSTMVLSDNDVVIVSAARTPIG-SFLGSLSELKAHDLGSTAIKEVLKRA----NVLPNEI 84
            S +     DVVIV+A R+ IG  F G+  ++    L    + E + R         N I
Sbjct: 2   NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLI 61

Query: 85  SEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLH 144
            EV  G  L  G G    R A + + IP   P   +N  C SGL +V   + +  +  + 
Sbjct: 62  EEVACGNVLNVGAGATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQID 121

Query: 145 W-LGNGAQYHITADAHG 160
             L  G +       + 
Sbjct: 122 IGLALGVESMTNNYKNV 138

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Length = 262

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

 Score = 81.1 bits (199), Expect = 8e-20
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 3/120 (2%)

Query: 35  LSDNDVVIVSAARTPIGSFLGSLS-ELKAHDLGSTAIKEVLKR-ANVLPNEISEVIL-GQ 91
           L+  DVVIV   RTP+G   G +    +A D+ +  I +VL+R + V P E+ +VI    
Sbjct: 2   LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCV 61

Query: 92  ALTAGQGQNPARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQ 151
             T  QG N AR AS+   IP+   A  V+ LCGS + ++   ++  +         G  
Sbjct: 62  NQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGV 121

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	100.0
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	100.0
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	100.0
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	100.0
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	99.72
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	99.7
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	99.69
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	99.67
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	99.56
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	99.48
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	99.43
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	99.39
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	99.1
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	98.98
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	98.84
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	98.8
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	98.79
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	98.69
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	98.15
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	98.12
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	94.65
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	94.59
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	92.51
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	92.03
d1okja1	106	Hypothetical protein YeaZ {Escherichia coli [TaxId	88.17
d1xhoa_	112	Chorismate mutase {Clostridium thermocellum [TaxId	87.91
d2a6aa1	103	Hypothetical protein TM0874 {Thermotoga maritima [	86.03

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.9e-35  Score=240.30  Aligned_cols=128  Identities=27%  Similarity=0.346  Sum_probs=121.9

Q ss_pred             ccccccCCCceEEEeeeeccccc-cCccCCCCCHHHHHHHHHHHHHHHc----CCCccccCceEEEeeecCCCCCChHHH
Q psy4156          30 RSTMVLSDNDVVIVSAARTPIGS-FLGSLSELKAHDLGSTAIKEVLKRA----NVLPNEISEVILGQALTAGQGQNPARQ  104 (160)
Q Consensus        30 ~~~~~~~m~~V~Ivg~~rTpfg~-~~g~~~~~~~~dL~~~A~~~aL~~a----gI~~~~ID~vi~G~~~~~~~g~~~ar~  104 (160)
                      ||+|+++++||||+++.|||||| ++|.|++++++||+..+++++++|+    +++|++||.+++||+.+.+++++++|+
T Consensus         2 ~~~~~~~~~dvvIv~a~RTP~gr~~~G~l~~~~~~~L~~~~i~~~l~r~~~~~~idp~~Id~vi~G~v~~~g~~~~~aR~   81 (269)
T d1afwa1           2 NSLLEKRPEDVVIVAANRSAIGKGFKGAFKDVNTDYLLYNFLNEFIGRFPEPLRADLNLIEEVACGNVLNVGAGATEHRA   81 (269)
T ss_dssp             TTTTSCCTTCEEEEEEEECCCEETTTSTTTTCCHHHHHHHHHHHHHHTSCHHHHTCGGGCCCEEEECSSSBGGGHHHHHH
T ss_pred             chhhhCCCCCEEEEcceeCcceeCCCCCCCCCCHHHHHHHHHHHHHHhCCccccCChhhcCEEEeccccccccccccchh
Confidence            68899999999999999999998 6899999999999999999999875    699999999999999987777889999


Q ss_pred             HHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         105 ASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       105 ~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++.+|+|.++|+++||++|+||++|+.+|++.|++|.++++|+||+|+||..
T Consensus        82 ~al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~~  134 (269)
T d1afwa1          82 ACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNN  134 (269)
T ss_dssp             HHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHH
T ss_pred             hhhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeeccccccc
Confidence            99999999999999999999999999999999999999999999999999963

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=100.00  E-value=8.4e-34  Score=232.04  Aligned_cols=121  Identities=45%  Similarity=0.647  Sum_probs=117.4

Q ss_pred             CCceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCc
Q psy4156          37 DNDVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVP  116 (160)
Q Consensus        37 m~~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vP  116 (160)
                      .++|||+++.||||++++|.|+++++.||+..+++++|+|++|+|++||++++||+.+.++++|++|++++.+|+|.++|
T Consensus         2 ~~~V~Iv~~~RTP~g~~~G~l~~~~~~dL~~~~~~~~l~~~~i~~~~Id~vi~G~~~~~~~~~n~ar~~al~aglp~~vp   81 (268)
T d1m3ka1           2 TPSIVIASAARTAVGSFNGAFANTPAHELGATVISAVLERAGVAAGEVNEVILGQVLPAGEGQNPARQAAMKAGVPQEAT   81 (268)
T ss_dssp             CCCEEEEEEEECCCEETTSTTTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCTTSCSCHHHHHHHHTTCCTTSE
T ss_pred             CCCEEEEeceeCcccCCCCCcCCCCHHHHHHHHHHHHHHHcCCCHHHCcEEEEeeccccCcchHHHhHHHHHhCCccccc
Confidence            46899999999999999999999999999999999999999999999999999999988888999999999999999999


Q ss_pred             eEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         117 ASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       117 a~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      +++||++|+||++|+.+|++.|++|..+++|++|+|+||..
T Consensus        82 a~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~  122 (268)
T d1m3ka1          82 AWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA  122 (268)
T ss_dssp             EEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTC
T ss_pred             ceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccC
Confidence            99999999999999999999999999999999999999964

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.3e-33  Score=230.26  Aligned_cols=124  Identities=32%  Similarity=0.423  Sum_probs=116.7

Q ss_pred             cCCCceEEEeeeecccccc-CccCCCCCHHHHHHHHHHHHHHH-cCCCccccCceEEEeeecCC-CCCChHHHHHHHcCC
Q psy4156          35 LSDNDVVIVSAARTPIGSF-LGSLSELKAHDLGSTAIKEVLKR-ANVLPNEISEVILGQALTAG-QGQNPARQASIKANI  111 (160)
Q Consensus        35 ~~m~~V~Ivg~~rTpfg~~-~g~~~~~~~~dL~~~A~~~aL~~-agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GL  111 (160)
                      +++++|||+++.|||||+. +|.+++.+++||+.++++++|+| +|++|++||++++||+.+.. ++++++|++++.+|+
T Consensus         2 ~n~r~v~Iv~a~RTP~g~~~gg~~~~~~~~dL~~~~i~~~l~r~agi~~~~Id~vi~G~v~~~~~~g~n~aR~~al~ag~   81 (262)
T d1wdkc1           2 LNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQI   81 (262)
T ss_dssp             CCTTCEEEEEEEECCCEETTTCTTTTCCHHHHHHHHHHHHHHHCTTSCGGGEEEEEEECSSBSBTTTTTHHHHHHTTSSS
T ss_pred             CCCCcEEEEeeeeCceeCCCCccccCCCHHHHHHHHHHHHHHhcCCCCHHHeeEEEEEeecccccccccchhhhHhhhhc
Confidence            4568999999999999986 67899999999999999999997 79999999999999998865 678999999999999


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      |.++|+++||++|+||++|+.+|++.|++|..+++|+||+|+||...
T Consensus        82 p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~p  128 (262)
T d1wdkc1          82 PHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVS  128 (262)
T ss_dssp             CTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSC
T ss_pred             ccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeeccccccccc
Confidence            99999999999999999999999999999999999999999999754

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-33  Score=230.13  Aligned_cols=120  Identities=33%  Similarity=0.422  Sum_probs=115.4

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCC-CCCChHHHHHHHcCCCCCCce
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAG-QGQNPARQASIKANIPNEVPA  117 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~-~g~~~ar~~al~~GLp~~vPa  117 (160)
                      |+|||++.|||||+++|.|+++++.||+.++++++|+|++|+|++||++++||+.+.+ ++++++|++++.+|+|.++|+
T Consensus         1 ~a~Iv~~~RTPfgk~~G~l~~~~~~dL~~~a~~~al~~~~i~~~~Id~vi~G~v~~~g~~~~n~aR~~al~aGlp~~vp~   80 (273)
T d1ulqa1           1 EAWIVEAVRTPIGKHGGALASVRPDDLLAHALSVLVDRSGVPKEEVEDVYAGCANQAGEDNRNVARMALLLAGFPVEVAG   80 (273)
T ss_dssp             CEEEEEEEECCCEETTSTTTTSCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSSTTTTTHHHHHHHHTTCCTTCEE
T ss_pred             CEEEEccccCccccCCCCCCCCCHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCccce
Confidence            6899999999999999999999999999999999999999999999999999998865 567899999999999999999


Q ss_pred             EEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccCC
Q psy4156         118 SLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITADA  158 (160)
Q Consensus       118 ~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~~  158 (160)
                      ++||++|+||++|+.+|+++|++|..+++|+||+|+||...
T Consensus        81 ~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~p  121 (273)
T d1ulqa1          81 CTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAP  121 (273)
T ss_dssp             EEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCC
T ss_pred             EEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchhh
Confidence            99999999999999999999999999999999999999753

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=1.6e-17  Score=126.40  Aligned_cols=115  Identities=15%  Similarity=0.085  Sum_probs=102.1

Q ss_pred             ceEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceE
Q psy4156          39 DVVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPAS  118 (160)
Q Consensus        39 ~V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~  118 (160)
                      +.+|.  .+|.+.+++..-+++++.+|+.+|++++|++++++|++||.+++++..++...|..+..++..+|++ +.+++
T Consensus        30 ~~~i~--~~~Gi~~r~~~~~~~~~~~la~~Aa~~al~~a~~~~~~Id~li~~s~~~~~~~P~~a~~v~~~Lgl~-~~~~~  106 (174)
T d1hnja1          30 DEWIV--TRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIK-GCPAF  106 (174)
T ss_dssp             HHHHH--HHHCCCEEEECCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCSCSSSCHHHHHHHHHTCC-SSCEE
T ss_pred             HHHHH--hccCcceeeecCCCccchHHHHHHHHHhhhhcccccccccEEEEecCCccccccchhhhhhhccCCC-chhhh
Confidence            45555  4677776766678899999999999999999999999999999999988876788999999999997 79999


Q ss_pred             EEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         119 LVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       119 ~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      +++.+|+++++|++.|..+|++|.++-+++.+.|.+|+
T Consensus       107 di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S~  144 (174)
T d1hnja1         107 DVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLAR  144 (174)
T ss_dssp             EECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHHH
T ss_pred             hhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhhc
Confidence            99999999999999999999999888777777888765

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=99.69  E-value=6.2e-17  Score=123.93  Aligned_cols=110  Identities=15%  Similarity=0.055  Sum_probs=97.4

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .+|++.+++.+.+++++.+|+.+|++.+|++++++|++||.+++++..++...+..+..++..+|.+ ++++++++.+|+
T Consensus        42 ~~tGi~~R~~~~~~e~~~~ma~~Aa~~aL~~a~~~~~dId~li~~s~~~~~~~p~~a~~v~~~l~~~-~~~~~Dv~~~C~  120 (181)
T d1mzja1          42 TRTGIRSRRIAEPDETIQVMGVAASRRALEHAGVDPAEIDLVVVSTMTNFVHTPPLSVAIAHELGAD-NAGGFDLSAACA  120 (181)
T ss_dssp             HHHCCSEEECCCTTCCHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSCCCCCSSCHHHHHHHHHTCT-TCEEEEEECGGG
T ss_pred             hccCcceehhhccCCcHHHHhHHHHHhhhhhccCChhHCeEEEEeccCCccccccHHHHHHHhhcCC-CccceeHHhhhc
Confidence            4677777777778999999999999999999999999999999999888776778888899999987 799999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      |+++|++.|..++++|.++-+++.+.|.+|.
T Consensus       121 g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s~  151 (181)
T d1mzja1         121 GFCHALSIAADAVESGGSRHVLVVATERMTD  151 (181)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCEEEEEEEEGGG
T ss_pred             cHHHHHHHHhCHhhcCCCceeEEeeeccccc
Confidence            9999999999999999766666666787764

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=99.67  E-value=1.6e-16  Score=120.76  Aligned_cols=114  Identities=13%  Similarity=0.017  Sum_probs=99.1

Q ss_pred             eEEEeeeeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEE
Q psy4156          40 VVIVSAARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASL  119 (160)
Q Consensus        40 V~Ivg~~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~  119 (160)
                      .+|.  .+|.+.+|+.+.++++..+|+.+|++++|+++|++|+|||.+++++..++...|..+..++..+|.  ..++++
T Consensus        29 ~~i~--~~~Gi~~R~~~~~~e~~~~ma~~Aa~~aL~~agi~~~dIdlli~~s~t~~~~~p~~a~~v~~~Lg~--~~~~~d  104 (172)
T d1ub7a1          29 EWIV--TRTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPDALFPDTAALVQARFGL--KAFAYD  104 (172)
T ss_dssp             HHHH--HHTCCCEEEECCTTCCHHHHHHHHHHHHHHHSTTTTTTEEEEEEECSSCSEEESCHHHHHHHHTTC--CCEEEE
T ss_pred             HHHH--hccCceeeeeccccccccHHHHHHHHHHHhhcCcccccceEEEEecccccccccchHHHHHHHhcc--Ccccee
Confidence            4444  467776777777889999999999999999999999999999999888766667888888888895  589999


Q ss_pred             EcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccccC
Q psy4156         120 VNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       120 V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~~  157 (160)
                      ++.+|++++.|++.|..++++|.++-+++.+.|.+|+-
T Consensus       105 i~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~  142 (172)
T d1ub7a1         105 LLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKI  142 (172)
T ss_dssp             EECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGT
T ss_pred             ehhccccHHHHHHHHhhhhhcCCcceeEEecccccccc
Confidence            99999999999999999999998777888888999863

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.56  E-value=5.4e-15  Score=114.57  Aligned_cols=96  Identities=10%  Similarity=-0.023  Sum_probs=84.7

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE-cccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV-NMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-~~aCaSGl~Al~~Aa~~I~  139 (160)
                      .+.+|+.+|++++|+++|++|+|||.+++++..+ ...|..+..++..+|++..++.+++ +.+|+|++++++.|..+++
T Consensus        74 ~a~~la~~Aa~~aL~~ag~~~~dId~lI~~s~t~-~~~P~~aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~  152 (200)
T d1u0ma1          74 EAKSRVPAVIQRALDDAELLATDIDVIIYVSCTG-FMMPSLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCT  152 (200)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSS-CCSSCHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhhhheEEEeccCC-CCcchhHHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHH
Confidence            4778999999999999999999999999988764 3567788888999999878999998 5799999999999999999


Q ss_pred             cCCCcEEEEEeecccccC
Q psy4156         140 LLTLHWLGNGAQYHITAD  157 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~~  157 (160)
                      +|..+-+++.+.|.+|+.
T Consensus       153 ~~~~~~vLvv~~e~~S~~  170 (200)
T d1u0ma1         153 AYPEANALIVACEFCSLC  170 (200)
T ss_dssp             HSTTCEEEEEEEEEGGGG
T ss_pred             hCCCCEEEEEEEeccccc
Confidence            997777888888988853

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.48  E-value=6.7e-14  Score=116.26  Aligned_cols=95  Identities=11%  Similarity=0.015  Sum_probs=82.8

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc-cCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM-LCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~-aCaSGl~Al~~Aa~~I~  139 (160)
                      ++.+|+.+|+++||+++|++|+|||.+|+++.. +...|..+.+++..+|++..+..+.+++ +|+|+++|+..|..+|+
T Consensus        91 ~~~~la~~Aa~~aL~~ag~~~~dId~lI~~t~t-~~~~P~~a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~  169 (372)
T d1teda_          91 HAVPLAVDVSKRALAGLPYRAAEIGLLVLATST-GFIAPGVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVR  169 (372)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCGGGEEEEEEEESS-CCCSSCHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCCHHHCCEEEEeccC-CCCCchHHHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHh
Confidence            466899999999999999999999999998864 4456788999999999986788888875 89999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      +|.++-+++.+.|.++.
T Consensus       170 sg~~~~~LVV~~E~~s~  186 (372)
T d1teda_         170 AHPAMKALVVCIELCSV  186 (372)
T ss_dssp             HSTTCEEEEEEEEECGG
T ss_pred             cCCCccceeeeehhhcc
Confidence            99777777777887654

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.43  E-value=1e-13  Score=103.98  Aligned_cols=109  Identities=12%  Similarity=0.001  Sum_probs=92.6

Q ss_pred             eeccccccCccCCCCCHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcccCc
Q psy4156          46 ARTPIGSFLGSLSELKAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNMLCG  125 (160)
Q Consensus        46 ~rTpfg~~~g~~~~~~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~aCa  125 (160)
                      .+|.+.+++-..+++++.+|+.+|++.+|++.  +|++||.+++++..++...+..+..++..+|++....+++++.+|+
T Consensus        34 ~~~Gi~~r~~~~~~E~~~~ma~~Aa~~al~~~--~~~~id~li~~t~~~~~~~p~~a~~v~~~lg~~~~~~~~dv~~~C~  111 (166)
T d1xpma1          34 IGIGQTEMAVSPVNQDIVSMGANAAKDIITDE--DKKKIGMVIVATESAVDAAKAAAVQIHNLLGIQPFARCFEMKEACY  111 (166)
T ss_dssp             TTTCCSEEEECCTTCCHHHHHHHHHHTTCCHH--HHHHEEEEEEECSSCSBSSSCHHHHHHHHTTCCSSCEEEEEESTTT
T ss_pred             HhcCcEEEEeCCCccCHHHHHHHHHHhhhccc--cCCCCCeEEEeccccccccchhHHHHHHhhccccceEEeeecccHH
Confidence            35666666666789999999999999999875  5899999999998877666778888999999977899999999999


Q ss_pred             cHHHHHHHHHHHHHcCCCcEEEEEeeccccc
Q psy4156         126 SGLKSVTLTSRQQVLLTLHWLGNGAQYHITA  156 (160)
Q Consensus       126 SGl~Al~~Aa~~I~sG~~~vlivgG~E~mt~  156 (160)
                      ++++|++.|..++++|..+-+++.+.|..+.
T Consensus       112 g~~~al~~A~~~i~~~~~~~alvV~sd~~~~  142 (166)
T d1xpma1         112 AATPAIQLAKDYLATRPNEKVLVIATDTARY  142 (166)
T ss_dssp             THHHHHHHHHHHHTTCTTCEEEEEEEEEECC
T ss_pred             HHHHHHHHHhhHHhcCCCCeEEEEEEceEec
Confidence            9999999999999999776666666776554

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=99.39  E-value=6.6e-13  Score=105.14  Aligned_cols=95  Identities=12%  Similarity=0.009  Sum_probs=77.1

Q ss_pred             CHHHHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEE-cccCccHHHHHHHHHHHHH
Q psy4156          61 KAHDLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLV-NMLCGSGLKSVTLTSRQQV  139 (160)
Q Consensus        61 ~~~dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V-~~aCaSGl~Al~~Aa~~I~  139 (160)
                      +..+|+.+|++++|+++|++++|||.+|+++..+... +..+..+...+|+..++..+.+ +.+|+++++++..|..+|+
T Consensus       101 ~~~~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~~~~-p~~~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~  179 (235)
T d1bi5a1         101 EVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDM-PGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAE  179 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCCS-SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCChhHCcEEEEecccCCcc-CccHHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999886543 3344445555566556766655 7789999999999999999


Q ss_pred             cCCCcEEEEEeeccccc
Q psy4156         140 LLTLHWLGNGAQYHITA  156 (160)
Q Consensus       140 sG~~~vlivgG~E~mt~  156 (160)
                      +|.++-+++.+.|.+|.
T Consensus       180 ~~~~~~vLvV~~E~~S~  196 (235)
T d1bi5a1         180 NNKGARVLVVCSEVTAV  196 (235)
T ss_dssp             TSTTCEEEEEEEECGGG
T ss_pred             cCCCCeEEEEEeeecce
Confidence            99887777888898874

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.98  E-value=1.3e-09  Score=83.03  Aligned_cols=91  Identities=21%  Similarity=0.231  Sum_probs=71.3

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC---------------------------C----CCC-hHHHH
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG---------------------------Q----GQN-PARQA  105 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~---------------------------~----g~~-~ar~~  105 (160)
                      ...|+..|+++||+++|+++++.+.    ++++......                           .    .++ ++..+
T Consensus        71 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i  150 (216)
T d1tqya1          71 ASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEV  150 (216)
T ss_dssp             HHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHH
T ss_pred             chhhHHHHHHHHHHHhcCCccccccccccccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHH
Confidence            4568999999999999999877665    3443322110                           0    011 35667


Q ss_pred             HHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         106 SIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       106 al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      +...|+.  =|.+++..+|+|+++||.+|+++|++|..|+.||||+|.+
T Consensus       151 a~~~g~~--Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~  197 (216)
T d1tqya1         151 AWAVGAE--GPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTP  197 (216)
T ss_dssp             HHHHTCC--SCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             HHhcCcc--ccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccc
Confidence            7778884  8999999999999999999999999999999999999974

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=98.84  E-value=1e-08  Score=77.50  Aligned_cols=88  Identities=19%  Similarity=0.117  Sum_probs=70.8

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-------------------------CCCC-hHHHHHHHcCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-------------------------QGQN-PARQASIKANIP  112 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-------------------------~g~~-~ar~~al~~GLp  112 (160)
                      ..++..+++++|+++|+++++++.    +++|+.....                         ..++ .+..++...|+.
T Consensus        71 ~~~~~~a~~~Al~~Ag~~~~~~~~~~~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~  150 (208)
T d1tqyb1          71 TRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMR  150 (208)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCC
T ss_pred             cccccccccccchhhhcccccccccccccccccccccccccchhhhhhccccccccccccccccccccccchhhhccccc
Confidence            558889999999999999988764    6777643100                         0112 345677788884


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYH  153 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~  153 (160)
                        =|+++++.+|+||+.||..|++.|++| .|+.|+||+|.
T Consensus       151 --Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~  188 (208)
T d1tqyb1         151 --GPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDS  188 (208)
T ss_dssp             --SSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEEC
T ss_pred             --ceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECcccc
Confidence              899999999999999999999999999 89999999996

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=98.80  E-value=9.1e-09  Score=80.31  Aligned_cols=91  Identities=14%  Similarity=0.186  Sum_probs=72.6

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC----ceEEEeeecCCC-------------------------C-CChHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS----EVILGQALTAGQ-------------------------G-QNPARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID----~vi~G~~~~~~~-------------------------g-~~~ar~~al~~GL  111 (160)
                      ...++.+++.+||+++|+++++++    .+++|+..+...                         . ..++..++...|+
T Consensus        71 ~~~~~l~aa~~Al~dAGl~~~~~~~~~~gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl  150 (249)
T d1j3na1          71 FVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGF  150 (249)
T ss_dssp             HHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHcCCChhHcCCccEEEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCC
Confidence            355789999999999999987755    567776433210                         0 1244467777788


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      .  =|+++++.+|+|++.||..|++.|++|+.|++||||+|..
T Consensus       151 ~--Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~  191 (249)
T d1j3na1         151 T--GPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAA  191 (249)
T ss_dssp             C--SCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             C--CCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhh
Confidence            4  7899999999999999999999999999999999999864

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=98.79  E-value=1.6e-08  Score=78.87  Aligned_cols=91  Identities=13%  Similarity=0.074  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-----------------C--------CCC-hHHHHHHHcCC
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-----------------Q--------GQN-PARQASIKANI  111 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-----------------~--------g~~-~ar~~al~~GL  111 (160)
                      ...|+..+++++|+++|+++++.+.    +++|+.....                 .        .++ ++..++...|+
T Consensus        72 ~~~~~l~aa~~Al~dAg~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl  151 (250)
T d2gfva1          72 FIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGL  151 (250)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHhcCCCccccCccceEEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCC
Confidence            3567899999999999998876654    4555532110                 0        011 35567777888


Q ss_pred             CCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         112 PNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       112 p~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      .  =|+++|+.+|+||++||..|++.|++|..|++|+||+|..
T Consensus       152 ~--Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~  192 (250)
T d2gfva1         152 R--GPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKA  192 (250)
T ss_dssp             C--SCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             C--CCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhh
Confidence            4  8999999999999999999999999999999999999853

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=98.69  E-value=2.2e-08  Score=77.31  Aligned_cols=90  Identities=13%  Similarity=0.145  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCc----eEEEeeecCC-----------------C---------CCChHHHHHHHcCCC
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISE----VILGQALTAG-----------------Q---------GQNPARQASIKANIP  112 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~----vi~G~~~~~~-----------------~---------g~~~ar~~al~~GLp  112 (160)
                      ..++.+++.++|+++|++++.+..    +++|+.....                 .         ....+..++...|+ 
T Consensus        73 ~~~~~~a~~~Al~~Agl~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl-  151 (250)
T d1e5ma1          73 CHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGA-  151 (250)
T ss_dssp             HHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHHHcCCChHhhcCCcceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccC-
Confidence            468999999999999998765544    6666532110                 0         01134556666787 


Q ss_pred             CCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         113 NEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       113 ~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                       .=|+++++.+|+||++|+.+|++.|++|..|..|+||+|.+
T Consensus       152 -~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~  192 (250)
T d1e5ma1         152 -KGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAA  192 (250)
T ss_dssp             -CSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECC
T ss_pred             -CCCCccccccchhhhhhhHHHhhcccCCcccccccccchhh
Confidence             48999999999999999999999999999999999999963

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=98.15  E-value=1.5e-06  Score=66.76  Aligned_cols=52  Identities=15%  Similarity=0.164  Sum_probs=46.5

Q ss_pred             hHHHHHHHcCCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeeccc
Q psy4156         101 PARQASIKANIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHI  154 (160)
Q Consensus       101 ~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~m  154 (160)
                      ++..++...|+.  =|+++|+.+|+|++.||++|++.|++|..|+.||||+|..
T Consensus       158 ~a~~is~~~~l~--Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~  209 (270)
T d2ix4a1         158 ASGHVSMKYGFQ--GPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESS  209 (270)
T ss_dssp             HHHHHHHHHTCC--SCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECC
T ss_pred             hHHHHHHHhCCC--CCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhh
Confidence            455677777884  7899999999999999999999999999999999999864

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=2.3e-06  Score=65.72  Aligned_cols=92  Identities=12%  Similarity=0.104  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHHHcCCCccccC-----ceEEEeeecCC-------------CC-------------C-ChHHHHHHHc
Q psy4156          62 AHDLGSTAIKEVLKRANVLPNEIS-----EVILGQALTAG-------------QG-------------Q-NPARQASIKA  109 (160)
Q Consensus        62 ~~dL~~~A~~~aL~~agI~~~~ID-----~vi~G~~~~~~-------------~g-------------~-~~ar~~al~~  109 (160)
                      ...+...+...+++++++.++..+     .++.|+.....             .+             . .++..+....
T Consensus        71 ~~~~~~~~~~~a~~~~~l~~~~~~~~~r~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~  150 (253)
T d2vbaa1          71 ASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPF  150 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTT
T ss_pred             hhhhhhHHHHHHHHHhhccchhccCCCCEEEEeccccccccccccccccccccCCccccCchhhhccccccccceecccc
Confidence            344788889999999998754332     34555432210             00             1 1334566667


Q ss_pred             CCCCCCceEEEcccCccHHHHHHHHHHHHHcCCCcEEEEEeecccc
Q psy4156         110 NIPNEVPASLVNMLCGSGLKSVTLTSRQQVLLTLHWLGNGAQYHIT  155 (160)
Q Consensus       110 GLp~~vPa~~V~~aCaSGl~Al~~Aa~~I~sG~~~vlivgG~E~mt  155 (160)
                      |+  .=|+++++.+|+||+.||..|++.|++|..+++|+||+|.++
T Consensus       151 g~--~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~~~  194 (253)
T d2vbaa1         151 KI--HGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELC  194 (253)
T ss_dssp             TC--CSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCC
T ss_pred             Cc--ccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhhhh
Confidence            77  489999999999999999999999999999999999999654

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.65  E-value=0.093  Score=36.91  Aligned_cols=47  Identities=11%  Similarity=0.063  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      ....++++++|+++|++++|||.++.=+     ....+-+.++..+|+|.+.
T Consensus        48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hq-----a~~~i~~~v~~~lgl~~ek   94 (148)
T d1u6ea2          48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQ-----ANSRINELLVKNLQLRPDA   94 (148)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECC-----SCHHHHHHHHHHHTCCTTC
T ss_pred             HHHHHHHHHHHHHcCCCcccccEEEecc-----ccHHHHHHHHHhcCCCchh
Confidence            4456789999999999999999987521     1234667788889998554

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=94.59  E-value=0.041  Score=38.79  Aligned_cols=53  Identities=21%  Similarity=0.198  Sum_probs=37.8

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      ...++++++|+++|++++|||.++.=     +.....-+.++..+|+|.+.-..++++
T Consensus        48 ~vp~~i~~~L~~~g~~~~dId~~i~H-----qa~~~~~~~i~~~lgi~~~k~~~~~~~  100 (149)
T d1ub7a2          48 VMNTATLEAIEKAGLTPEDIRLFVPH-----QANLRIIDAARERLGLPWERVAVNVDR  100 (149)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEEC-----CSCHHHHHHHHHTTTCCGGGBCCCHHH
T ss_pred             HHHHHHHHHHHhhccccccccEEEee-----ccchHHHHHHHhhccchhhHHHHHHHH
Confidence            34578899999999999999987641     122346677888899986543344554

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=92.51  E-value=0.19  Score=34.90  Aligned_cols=53  Identities=8%  Similarity=0.014  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEcc
Q psy4156          65 LGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVNM  122 (160)
Q Consensus        65 L~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~~  122 (160)
                      ...++++++|+++|++++|||.++.=     +....+-+.++..+|+|.+.-..++++
T Consensus        45 ~~~~~i~~~L~~~g~~~~dId~~i~H-----q~~~~~~~~~~~~l~l~~~k~~~~~~~   97 (143)
T d1hnja2          45 ELAHIVDETLAANNLDRSQLDWLVPH-----QANLRIISATAKKLGMSMDNVVVTLDR   97 (143)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEEC-----CSCHHHHHHHHHHTTCCGGGBCCCHHH
T ss_pred             hhhHHHHHHHHHhhhcccccceEEec-----cCchHHHHHHHHhCccchhhhhhhhhh
Confidence            45678899999999999999988641     112236677888899986433344443

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=92.03  E-value=0.25  Score=34.77  Aligned_cols=47  Identities=13%  Similarity=0.092  Sum_probs=35.0

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCC
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEV  115 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~v  115 (160)
                      .-..++++++|+++|++++|||.++.=     +....+-+.++..+|+|.+.
T Consensus        48 ~~vp~~i~~~L~~~gl~~~dId~~i~H-----q~~~~~~~~v~~~lgi~~ek   94 (153)
T d1mzja2          48 ADVVPAAREALEVAGLTVGDLVAFVPH-----QANLRIIDVLVDRLGVPEHV   94 (153)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEEC-----CSCHHHHHHHHHHHTCCTTS
T ss_pred             HHHHHHHHHHHHHhCCCcccCCEEEEc-----CCcHHHHHHHHHHhCCCchh
Confidence            445568889999999999999988741     11234667788889998654

>d1okja1 c.55.1.9 (A:1-106) Hypothetical protein YeaZ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein YeaZ
species: Escherichia coli [TaxId: 562]

Probab=88.17  E-value=0.091  Score=34.93  Aligned_cols=61  Identities=15%  Similarity=0.189  Sum_probs=38.5

Q ss_pred             HHHHHHHHHHHHHcCCCccccCceEEEeeecCCCCC----ChHHHHHHHcCCCCCCceEEEcccCccHHHHHHH
Q psy4156          64 DLGSTAIKEVLKRANVLPNEISEVILGQALTAGQGQ----NPARQASIKANIPNEVPASLVNMLCGSGLKSVTL  133 (160)
Q Consensus        64 dL~~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~----~~ar~~al~~GLp~~vPa~~V~~aCaSGl~Al~~  133 (160)
                      +.....++++|++++++++|||.++++.--+.+.+-    ..++.++..    .++|.+.|+     .++++..
T Consensus        35 ~~l~~~i~~~l~~~~~~~~di~~i~v~~GPGsfTglRig~s~akgla~~----~~ip~~~v~-----sl~~la~   99 (106)
T d1okja1          35 QRILPMVQDILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALG----AELPMIGVS-----TLMTMAQ   99 (106)
T ss_dssp             TTHHHHHHHHHHHTTCCGGGCCEEEEEEESSCHHHHHHHHHHHHHHHHH----TTCCEEEEE-----HHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCcceeeeEEEEeeccCccccchHHHHHHHHHHHH----cCCCEEEeC-----HHHHHHH
Confidence            445678899999999999999999988742221221    223333333    357777664     4555543

>d1xhoa_ d.79.1.2 (A:) Chorismate mutase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: YjgF-like
family: Chorismate mutase
domain: Chorismate mutase
species: Clostridium thermocellum [TaxId: 1515]

Probab=87.91  E-value=0.84  Score=30.86  Aligned_cols=58  Identities=16%  Similarity=0.186  Sum_probs=39.3

Q ss_pred             CHHHHH---HHHHHHHHHHcCCCccccCceEEEeeecCCCCCChHHHHHHHcCCCCCCceEEEc
Q psy4156          61 KAHDLG---STAIKEVLKRANVLPNEISEVILGQALTAGQGQNPARQASIKANIPNEVPASLVN  121 (160)
Q Consensus        61 ~~~dL~---~~A~~~aL~~agI~~~~ID~vi~G~~~~~~~g~~~ar~~al~~GLp~~vPa~~V~  121 (160)
                      +++++.   .+..++.+++++++++||-.+++.. +++-...++|. +++..|+. .+|-+..+
T Consensus        14 ~~e~I~~at~eLl~~ii~~N~l~~edi~Sv~FT~-T~DL~a~FPA~-aaR~lG~~-~Vpl~c~~   74 (112)
T d1xhoa_          14 TADEIVAETQKLLKEMAEKNGLEEDDIISIIFTV-TKDLDAAFPAI-AARNMGWT-STALMCMN   74 (112)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEE-CTTCCSSCTHH-HHHHTTCT-TSEEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEe-cCcccccCCHH-HHhhcCCC-cccccccC
Confidence            444443   2334455668999999999998865 45554556664 66677996 89987654

>d2a6aa1 c.55.1.9 (A:1-103) Hypothetical protein TM0874 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Actin-like ATPase domain
family: YeaZ-like
domain: Hypothetical protein TM0874
species: Thermotoga maritima [TaxId: 2336]

Probab=86.03  E-value=0.16  Score=33.42  Aligned_cols=29  Identities=14%  Similarity=0.280  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHHHcCCCccccCceEEEe
Q psy4156          63 HDLGSTAIKEVLKRANVLPNEISEVILGQ   91 (160)
Q Consensus        63 ~dL~~~A~~~aL~~agI~~~~ID~vi~G~   91 (160)
                      .+.....++++|++++++++|||.++++.
T Consensus        34 s~~l~~~i~~~l~~~~~~~~di~~i~v~~   62 (103)
T d2a6aa1          34 AEILPVVVKKLLDELDLKVKDLDVVGVGI   62 (103)
T ss_dssp             GGHHHHHHHHHHHHHTCCGGGCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHcCCCHHHhHHHhhcC
Confidence            45667789999999999999999998876